BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038067
(510 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255573808|ref|XP_002527823.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis]
gi|223532747|gb|EEF34526.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis]
Length = 603
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/505 (71%), Positives = 403/505 (79%), Gaps = 42/505 (8%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKVKVEE------------IMGGFIRKD-GE 47
AVNFCP CKTAFYFRPFKL PL+GSFIELG+VK + GG I KD G+
Sbjct: 99 AVNFCPNCKTAFYFRPFKLEPLQGSFIELGRVKGFDNGSCSSNNVNCKDTGGVIVKDCGK 158
Query: 48 SNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVY 107
E + + + + E +LPTPKEICKGLDEFVIGQ+RAKK +L
Sbjct: 159 IGSFEVACDDVDDDDDVKLEN--ELPTPKEICKGLDEFVIGQDRAKK-----VLA----- 206
Query: 108 VIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVL 167
AVYNHYKRIYH S +KE +D Y DS +++EIVEL+KSNVL
Sbjct: 207 -----VAVYNHYKRIYHGSKRKESGADMGYTDS-----------QNDDNEIVELDKSNVL 250
Query: 168 LMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAA 227
LMGPTGSGKTLLAKTLAR+VNVPF I DAT LTQAGYVGED ES+LYKLLAA++F+VEAA
Sbjct: 251 LMGPTGSGKTLLAKTLARVVNVPFVIADATTLTQAGYVGEDVESILYKLLAASEFNVEAA 310
Query: 228 QRGIVYIDEVDKIVK-AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGD 286
QRGI+YIDEVDKI K AES N GRDVSGEGVQQALLKMLEGT+VNVP+PD GPRKHPRGD
Sbjct: 311 QRGIIYIDEVDKITKKAESSNIGRDVSGEGVQQALLKMLEGTIVNVPVPDKGPRKHPRGD 370
Query: 287 NIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLES 346
I IDTKDILFICGGAFV LEKTISERRQD+SIGFGAPVR NMRTG + DA+V SSLLES
Sbjct: 371 PIQIDTKDILFICGGAFVDLEKTISERRQDASIGFGAPVRTNMRTGRMIDAVVASSLLES 430
Query: 347 VDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLH 406
V+SGDLVAYGLIPEF+GRFPILVSLSALNEDQLVQVL+EPKNALG+QYKKMFSMN+VKLH
Sbjct: 431 VESGDLVAYGLIPEFVGRFPILVSLSALNEDQLVQVLVEPKNALGKQYKKMFSMNDVKLH 490
Query: 407 FTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
FTD+ALRLIAKKAMAKNTGARGLRA+LE+ILTEAM+EIPE K G++ ++AVLVD+EAVGS
Sbjct: 491 FTDEALRLIAKKAMAKNTGARGLRAILESILTEAMYEIPENKTGSNCISAVLVDEEAVGS 550
Query: 467 VDAPGCGAKILHGDGELERVLHETK 491
D PGCGAKILHGDG L H TK
Sbjct: 551 ADEPGCGAKILHGDGALGCSFHATK 575
>gi|297739450|emb|CBI29632.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/497 (69%), Positives = 385/497 (77%), Gaps = 69/497 (13%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKVKVEEIMGGFIRKDGESNGIESESETENG 60
A+N CP C+TAFYFRPFKL PL+GSFIE+G+ + E
Sbjct: 90 ALNLCPNCRTAFYFRPFKLAPLQGSFIEIGRRRRE------------------------- 124
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
LPTPKEICKGLDEFVIGQE+AKK AVYNHYK
Sbjct: 125 -----------LPTPKEICKGLDEFVIGQEQAKKV---------------LSVAVYNHYK 158
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDE--IVELEKSNVLLMGPTGSGKTL 178
RI+H+SLQKE SG +S ++ND+ VELEKSNVLL+GPTGSGKTL
Sbjct: 159 RIHHASLQKE-------------SGAESTKAEIDNDDNDSVELEKSNVLLLGPTGSGKTL 205
Query: 179 LAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVD 238
LAKTLAR+VNVPF I DAT LTQA YVGED ES+L+KLL A+F+VEAAQ+GIVYIDEVD
Sbjct: 206 LAKTLARVVNVPFVIADATTLTQASYVGEDVESILHKLLMVAEFNVEAAQQGIVYIDEVD 265
Query: 239 KIVK-AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILF 297
KI K AES N GRDVSGEGVQQALLKMLEGT+VNVP D G RKHPRGDNI IDTKDILF
Sbjct: 266 KITKKAESLNTGRDVSGEGVQQALLKMLEGTIVNVP--DKGGRKHPRGDNIQIDTKDILF 323
Query: 298 ICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGL 357
ICGGAFV LEKTISERRQDSSIGFGAPVRANMRTGGLTDA+VTSSLLESV+SGDL+AYGL
Sbjct: 324 ICGGAFVDLEKTISERRQDSSIGFGAPVRANMRTGGLTDAVVTSSLLESVESGDLIAYGL 383
Query: 358 IPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAK 417
IPEFIGRFPILVSLSALNEDQLVQVL EPKNALG+QYKKM SMNNVKLHFT++ALRLIAK
Sbjct: 384 IPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGKQYKKMLSMNNVKLHFTENALRLIAK 443
Query: 418 KAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKIL 477
KA+AKNTGAR LRA+LE ILTEAMFEIP+ K GT V+AVLVD+EAV S++ GCGAK+L
Sbjct: 444 KAIAKNTGARSLRAILEKILTEAMFEIPDVKTGTDMVDAVLVDEEAVESIEEQGCGAKVL 503
Query: 478 HGDGELERVLHETKSAH 494
G+G LE+ LHETKS++
Sbjct: 504 RGEGALEQFLHETKSSN 520
>gi|224129802|ref|XP_002328806.1| predicted protein [Populus trichocarpa]
gi|222839104|gb|EEE77455.1| predicted protein [Populus trichocarpa]
Length = 521
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/519 (66%), Positives = 388/519 (74%), Gaps = 61/519 (11%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKVK-VEEIMGGFIRKDGESNGIESESETEN 59
AVNFCP CKTAFYFRPFKL PL+G+FIELG+VK + KD +E E E
Sbjct: 35 AVNFCPACKTAFYFRPFKLEPLQGNFIELGRVKGLYNNNNNNNCKD-----VEGIIEKEC 89
Query: 60 GNRNRNSEG----------NIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVI 109
G RN+E +LPTPKEICKGLDEFVIGQ++AKK
Sbjct: 90 GKSGRNAEEVSGGGGGGGLERELPTPKEICKGLDEFVIGQDKAKKV-------------- 135
Query: 110 GACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDE--IVELEKSNVL 167
AVYNHYKRIYH+S QK+ + + D ENDE +EL+KSNVL
Sbjct: 136 -LSVAVYNHYKRIYHASKQKKSHAPWSHSDG-------------ENDENEFIELDKSNVL 181
Query: 168 LMGPTGSGKTLLAKTLARIVNVPFTITDATALTQA-------GYVGEDAESVLYKLLAAA 220
LMGPTGSGKTLLAKTLARIVNVPF I DAT LTQA GYVGED ES+LYKLL A
Sbjct: 182 LMGPTGSGKTLLAKTLARIVNVPFVIADATTLTQASLFCCTAGYVGEDVESILYKLLVVA 241
Query: 221 DFDVEAAQRGIVYIDEVDKI--------VKAESRNNGRDVSGEGVQQALLKMLEGTVVNV 272
+F+VEAAQRGIVYIDEVDKI V+A S + GRDVSGEGVQQALLKMLEGTV+NV
Sbjct: 242 EFNVEAAQRGIVYIDEVDKITMKVYDFCVQAGSSSIGRDVSGEGVQQALLKMLEGTVINV 301
Query: 273 PIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTG 332
P+PD GP KHPRGD I +DTKDILFICGGAFV LEKTISERRQD+SIGFGAPVRANMR G
Sbjct: 302 PVPDKGPGKHPRGDTIQVDTKDILFICGGAFVNLEKTISERRQDASIGFGAPVRANMRAG 361
Query: 333 GLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGR 392
+T+A+VTSSLLESV+SGDLVAYGLIPEF+GRFP+L SL ALNEDQLVQVLMEPKNALG+
Sbjct: 362 AITNAMVTSSLLESVESGDLVAYGLIPEFVGRFPVLASLLALNEDQLVQVLMEPKNALGK 421
Query: 393 QYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTS 452
QYKK+F+MNNV LHFT +ALRLIAKKAM KNTGARGLRA+LENILTEAMFE PE K ++
Sbjct: 422 QYKKIFNMNNVNLHFTGNALRLIAKKAMTKNTGARGLRAILENILTEAMFETPENKSQSN 481
Query: 453 SVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHETK 491
+ AVLVD+EAVG +D PGCGAKI+HGD LE L E K
Sbjct: 482 CITAVLVDEEAVGLMDTPGCGAKIVHGDSALEHKLQERK 520
>gi|297734727|emb|CBI16961.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 353/517 (68%), Positives = 390/517 (75%), Gaps = 44/517 (8%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKVK---VEEIMGGFIRK-----------DG 46
AVN CP CKTA+YFRP+K+ PL+GSF+E+G EE G +R D
Sbjct: 34 AVNLCPNCKTAYYFRPYKIAPLQGSFVEIGSKNGGGHEEDYGSRLRMSFWETLRSYGGDP 93
Query: 47 ESNGIESESETENGNRNRNSEGNI----DLPTPKEICKGLDEFVIGQERAKKSHIFCILV 102
N RN G DLPTPKEICKGLD+FVIGQERAKK F
Sbjct: 94 PENWPPPPPPPSGNGLARNGWGGSNLGKDLPTPKEICKGLDKFVIGQERAKKLD-FIPFS 152
Query: 103 DMLVYVIGAC-------CAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEN 155
D LV C AVYNHYKRIYH SLQK GSG +SG V++
Sbjct: 153 DFLVRS-NWCQTWEVLSVAVYNHYKRIYHGSLQK-------------GSGAESGTSEVDD 198
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
D VELEKSNVLLMGPTGSGKTLLAKTLAR VNVPF I DAT LTQAGYVGED ES+LYK
Sbjct: 199 DS-VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYK 257
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
LL A+F+V+AAQ+G+VYIDEVDKI K AES N RDVSGEGVQQALLKMLEGT+VNVP
Sbjct: 258 LLTVAEFNVQAAQQGMVYIDEVDKITKKAESLNLSRDVSGEGVQQALLKMLEGTIVNVP- 316
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
+ G RKHPRGDNI IDTKDILFICGGAFV LEKTIS+RRQDSSIGFGAPVRANMRTGGL
Sbjct: 317 -EKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRTGGL 375
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
T+A+VTSSLLESV+S DL+AYGLIPEFIGRFPILVSLSAL EDQLV+VL EPKNALG+QY
Sbjct: 376 TNAVVTSSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEDQLVKVLTEPKNALGKQY 435
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSV 454
KK+FSMNNVKLHFT+ ALR IAKKAM KNTGARGLRALLE+ILTEAM+EIP+ K G V
Sbjct: 436 KKLFSMNNVKLHFTEKALRQIAKKAMVKNTGARGLRALLESILTEAMYEIPDVKTGKDRV 495
Query: 455 NAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHETK 491
+AV+VD+E+VGSV+APGCG KIL GDG L+ L ETK
Sbjct: 496 DAVVVDEESVGSVNAPGCGGKILRGDGALDCYLAETK 532
>gi|357149618|ref|XP_003575174.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
isoform 1 [Brachypodium distachyon]
Length = 640
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 336/558 (60%), Positives = 394/558 (70%), Gaps = 84/558 (15%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKVKVEEIMGGF----------------IRK 44
A+N CP C+TA++FRP L PL+G+F+E+G+V+ + G R
Sbjct: 107 ALNLCPNCRTAYFFRPNILAPLQGTFVEIGRVRADFPPDGVRVRDPSFWEAIRASSSSRD 166
Query: 45 DGESNGI--------------------------ESESETENGNRNRNSEGNIDL----PT 74
DG+ +G+ + ++ G +L PT
Sbjct: 167 DGDGSGVAVHVPPGPPFHPNLNVVRVAGGGGGGGAGGGGGEEGGAKDGWGGSNLGKDFPT 226
Query: 75 PKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSD 134
PKEI KGLD++VIGQERAKK +L AVYNHYKRIYH S+QK
Sbjct: 227 PKEISKGLDKYVIGQERAKK-----VL----------SVAVYNHYKRIYHQSVQK----- 266
Query: 135 HLYVDSILGSGVKSGNCNVE--NDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFT 192
GSG G+ + E D+ VELEKSNVLLMGPTGSGKTLLAKTLAR VNVPF
Sbjct: 267 --------GSGADLGSSDGEADGDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFV 318
Query: 193 ITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRD 251
I DAT LTQAGYVGED ES+LYKLL ADF+V+AAQ+G+VYIDEVDKI KAES N RD
Sbjct: 319 IADATTLTQAGYVGEDVESILYKLLTVADFNVQAAQQGMVYIDEVDKITKKAESLNISRD 378
Query: 252 VSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTIS 311
VSGEGVQQALLKMLEGT+VNV P+ G RKHPRGDNI IDTKDILFICGGAF+ LEKTIS
Sbjct: 379 VSGEGVQQALLKMLEGTIVNV--PEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTIS 436
Query: 312 ERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSL 371
ERRQDSSIGFGAPVRA+MRTGG++ A VTSSLLESV+SGDL+AYGLIPEFIGRFPILVSL
Sbjct: 437 ERRQDSSIGFGAPVRASMRTGGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSL 496
Query: 372 SALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRA 431
+ALNEDQLVQVL EPKNALG+Q++K+FSMNNVKLHFTD ALR+IAKKAM KNTGARGLR
Sbjct: 497 AALNEDQLVQVLTEPKNALGKQFRKLFSMNNVKLHFTDSALRIIAKKAMCKNTGARGLRT 556
Query: 432 LLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHETK 491
+LENIL ++M+EIP+TK G ++AV+VD++AVGSVD PGCGAKIL+GDG + L + K
Sbjct: 557 ILENILMDSMYEIPDTKSGEKRIDAVVVDEDAVGSVDRPGCGAKILYGDGSFDHYLSQIK 616
Query: 492 -----SAHENDSEVLLKS 504
+ E D E L S
Sbjct: 617 AMGDGAGSEADGEADLSS 634
>gi|413937331|gb|AFW71882.1| hypothetical protein ZEAMMB73_870207 [Zea mays]
Length = 642
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 334/543 (61%), Positives = 385/543 (70%), Gaps = 80/543 (14%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKVKVEEI-------------------MGGF 41
A+N CP C++A++F P L PL+G+F+E+G+V+ + +
Sbjct: 108 ALNLCPNCRSAYFFHPHVLAPLQGTFVEIGRVRADLLDHPAARARERDPVFWEAIRASSS 167
Query: 42 IRKDGESNGIESESET-----ENGNRNR-----------------------NSEGNIDLP 73
R DGE G+ N N R S DLP
Sbjct: 168 SRDDGEGGGVAVHVPPGPPFHPNLNVVRVAGSGGGGGGGAGDEGAGKEGWGGSNLGRDLP 227
Query: 74 TPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVS 133
TPKEICKGLD++VIGQ+RAKK +L AVYNHYKRIYH SLQK
Sbjct: 228 TPKEICKGLDKYVIGQDRAKK-----VL----------SVAVYNHYKRIYHQSLQK---- 268
Query: 134 DHLYVDSILGSGVKSGNCNVE--NDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
GSG G + E +D VELEKSNVLLMGPTGSGKTLLAKTLAR VNVPF
Sbjct: 269 ---------GSGADLGGFDGEADDDNNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPF 319
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNGR 250
I DAT LTQAGYVGED ES+LYKLL ADF+V+AAQ+G+VYIDEVDKI K AES N R
Sbjct: 320 VIADATTLTQAGYVGEDVESILYKLLTVADFNVQAAQQGMVYIDEVDKITKKAESLNISR 379
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKMLEGT+VNVP + G RKHPRGDNI IDTKDILFICGGAFV LEKTI
Sbjct: 380 DVSGEGVQQALLKMLEGTIVNVP--EKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTI 437
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
SERRQDSSIGFGAPVRANMR GG + A VTSSLLESV+SGDL+AYGLIPEFIGRFPILVS
Sbjct: 438 SERRQDSSIGFGAPVRANMRVGGTSSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVS 497
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ALNEDQLVQVL EPKNALG+Q+KK+FSMN+VKLHFTD ALR+IA+KAM+KNTGARGLR
Sbjct: 498 LTALNEDQLVQVLTEPKNALGKQFKKLFSMNDVKLHFTDGALRIIAEKAMSKNTGARGLR 557
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHET 490
+LENIL ++M+EIP+ K G ++AV+VD++AVGSVD PG GAKIL+GDG L++ L
Sbjct: 558 TILENILMDSMYEIPDAKSGEKRIDAVVVDEDAVGSVDQPGYGAKILYGDGALDQYLSHI 617
Query: 491 KSA 493
K A
Sbjct: 618 KVA 620
>gi|8978260|dbj|BAA98151.1| CLP protease regulatory subunit CLPX-like [Arabidopsis thaliana]
Length = 608
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 326/517 (63%), Positives = 393/517 (76%), Gaps = 51/517 (9%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKVK--------VEEIMGGFIRKDGESNGIE 52
AVNFC +CKTAFYFRPFKL+PL+GSFIELGKVK ++ F R + + G+
Sbjct: 111 AVNFCSQCKTAFYFRPFKLSPLQGSFIELGKVKGTDDDHDDDDDDQKSFPR-NWKIQGLR 169
Query: 53 SESET---------ENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVD 103
S+ + NG ++ + I LPTPKEIC+GLDEFVIGQE+AKK +L
Sbjct: 170 SDEDGEDADEEEDESNGG-DKEKQSVIKLPTPKEICQGLDEFVIGQEKAKK-----VL-- 221
Query: 104 MLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEI--VEL 161
AVYNHYKRIYH+S +K GS +S N ++E+D I VEL
Sbjct: 222 --------SVAVYNHYKRIYHASRKK-------------GSASESYNIDMEDDNIDHVEL 260
Query: 162 EKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAAD 221
+KSNVLL+GPTGSGKTLLAKTLARIVNVPF I DAT+LTQAGYVGED ES+LYKL A
Sbjct: 261 DKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQAGYVGEDVESILYKLYVEAG 320
Query: 222 FDVEAAQRGIVYIDEVDKI-VKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPR 280
+VE AQRGIVYIDEVDK+ +K+ S N GRDVSGEGVQQ+LLK+LEGTVV+VPIP+ G R
Sbjct: 321 CNVEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVSVPIPEKGLR 380
Query: 281 KHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVT 340
+ PRGD+I +DTKDILFICGGAF+ LEKT+SER+ D+SIGFGA VR NM T GL+ A VT
Sbjct: 381 RDPRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGLSSAAVT 440
Query: 341 SSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSM 400
SSLLES+ S DLVAYGLIPEF+GR PILVSLSALNEDQLVQVL EPK+ALG+QYKK+F M
Sbjct: 441 SSLLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYKKLFRM 500
Query: 401 NNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKI-GTSSVNAVLV 459
NNV+L FT+ A RLIA+KAM+KNTGARGLR++LE+ILTEAMFE+P++ G+ S+ AVLV
Sbjct: 501 NNVQLQFTEGATRLIARKAMSKNTGARGLRSILESILTEAMFEVPDSITEGSQSIKAVLV 560
Query: 460 DKEAVGSVDAPGCGAKILHGDGELERVLHETKSAHEN 496
D+EAVGSV +PGCGAKIL GD L++ + E +S ++
Sbjct: 561 DEEAVGSVGSPGCGAKILKGDNVLQQFVEEAESKEKS 597
>gi|240256421|ref|NP_568714.4| ATP-dependent Clp protease [Arabidopsis thaliana]
gi|332008480|gb|AED95863.1| ATP-dependent Clp protease [Arabidopsis thaliana]
Length = 608
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 325/517 (62%), Positives = 392/517 (75%), Gaps = 51/517 (9%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKVK--------VEEIMGGFIRKDGESNGIE 52
AVNFC +CKTAFYFRPFKL+PL+GSFIELGKVK ++ F R + + G+
Sbjct: 111 AVNFCSQCKTAFYFRPFKLSPLQGSFIELGKVKGTDDDHDDDDDDQKSFPR-NWKIQGLR 169
Query: 53 SESET---------ENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVD 103
S+ + NG ++ + I LPTPKEIC+GLDEFVIGQE+AKK +L
Sbjct: 170 SDEDGEDADEEEDESNGG-DKEKQSVIKLPTPKEICQGLDEFVIGQEKAKK-----VL-- 221
Query: 104 MLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEI--VEL 161
AVYNHYKRIYH+S +K GS +S N ++E+D I VEL
Sbjct: 222 --------SVAVYNHYKRIYHASRKK-------------GSASESYNIDMEDDNIDHVEL 260
Query: 162 EKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAAD 221
+KSNVLL+GPTGSGKTLLAKTLARIVNVPF I DAT+LTQA YVGED ES+LYKL A
Sbjct: 261 DKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQASYVGEDVESILYKLYVEAG 320
Query: 222 FDVEAAQRGIVYIDEVDKI-VKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPR 280
+VE AQRGIVYIDEVDK+ +K+ S N GRDVSGEGVQQ+LLK+LEGTVV+VPIP+ G R
Sbjct: 321 CNVEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVSVPIPEKGLR 380
Query: 281 KHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVT 340
+ PRGD+I +DTKDILFICGGAF+ LEKT+SER+ D+SIGFGA VR NM T GL+ A VT
Sbjct: 381 RDPRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGLSSAAVT 440
Query: 341 SSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSM 400
SSLLES+ S DLVAYGLIPEF+GR PILVSLSALNEDQLVQVL EPK+ALG+QYKK+F M
Sbjct: 441 SSLLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYKKLFRM 500
Query: 401 NNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKI-GTSSVNAVLV 459
NNV+L FT+ A RLIA+KAM+KNTGARGLR++LE+ILTEAMFE+P++ G+ S+ AVLV
Sbjct: 501 NNVQLQFTEGATRLIARKAMSKNTGARGLRSILESILTEAMFEVPDSITEGSQSIKAVLV 560
Query: 460 DKEAVGSVDAPGCGAKILHGDGELERVLHETKSAHEN 496
D+EAVGSV +PGCGAKIL GD L++ + E +S ++
Sbjct: 561 DEEAVGSVGSPGCGAKILKGDNVLQQFVEEAESKEKS 597
>gi|297792267|ref|XP_002864018.1| hypothetical protein ARALYDRAFT_495043 [Arabidopsis lyrata subsp.
lyrata]
gi|297309853|gb|EFH40277.1| hypothetical protein ARALYDRAFT_495043 [Arabidopsis lyrata subsp.
lyrata]
Length = 605
Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust.
Identities = 327/513 (63%), Positives = 391/513 (76%), Gaps = 53/513 (10%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKVK--------VEEIMGGFIRKDGESNGIE 52
AVNFC +CKTAFYFRPFKL+PL+GSFIELGKVK ++ F R + + G+
Sbjct: 110 AVNFCSQCKTAFYFRPFKLSPLQGSFIELGKVKGTDDDHDDDDDDQKSFPR-NWKIQGLR 168
Query: 53 SESETE---------NGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVD 103
S+ + E NG R++ + I LPTPKEIC+GLDEFVIGQE+AKK +L
Sbjct: 169 SDEDGEDAEEDEDETNG-RDKEKQSVIKLPTPKEICQGLDEFVIGQEKAKK-----VL-- 220
Query: 104 MLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEI--VEL 161
AVYNHYKRIYH+S +K VS +S N ++E++ I VEL
Sbjct: 221 --------SVAVYNHYKRIYHASRKKGFVS-------------RSDNLDMEDENIDHVEL 259
Query: 162 EKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAAD 221
+KSNVLL+GPTGSGKTLLAKTLARIVNVPF I DAT+LTQAGYVGED ES+LYKL A
Sbjct: 260 DKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQAGYVGEDVESILYKLYVEAG 319
Query: 222 FDVEAAQRGIVYIDEVDKI-VKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPR 280
+VE AQRGIVYIDEVDK+ +K+ S N GRDVSGEGVQQ+LLK+LEGTVV PIP+ G R
Sbjct: 320 CNVEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGTVV--PIPEKGLR 377
Query: 281 KHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVT 340
+ PRGD+I +DTKDILFICGGAF+ LEKT+SER+ D+SIGFGA VR NM T G + A VT
Sbjct: 378 RDPRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGFSSAAVT 437
Query: 341 SSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSM 400
SSLLES+ S DLVAYGLIPEF+GR PILVSLSALNEDQLVQVL EPK+ALG+QYKK+F M
Sbjct: 438 SSLLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYKKLFRM 497
Query: 401 NNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKI-GTSSVNAVLV 459
NNV+LHFT+ A RLIA+KAM+KNTGARGLR++LE+ILTEAMFE+P++ G+ S+ AVLV
Sbjct: 498 NNVQLHFTEGATRLIARKAMSKNTGARGLRSILESILTEAMFEVPDSVTEGSQSIKAVLV 557
Query: 460 DKEAVGSVDAPGCGAKILHGDGELERVLHETKS 492
D+EAVGSV PGCGAKIL GD L++ + ET+S
Sbjct: 558 DEEAVGSVGTPGCGAKILKGDNVLQQFVEETES 590
>gi|413937330|gb|AFW71881.1| hypothetical protein ZEAMMB73_870207 [Zea mays]
Length = 643
Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust.
Identities = 330/541 (60%), Positives = 384/541 (70%), Gaps = 75/541 (13%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKVKVEEI-------------------MGGF 41
A+N CP C++A++F P L PL+G+F+E+G+V+ + +
Sbjct: 108 ALNLCPNCRSAYFFHPHVLAPLQGTFVEIGRVRADLLDHPAARARERDPVFWEAIRASSS 167
Query: 42 IRKDGESNGIESESET-----ENGNRNR-----------------------NSEGNIDLP 73
R DGE G+ N N R S DLP
Sbjct: 168 SRDDGEGGGVAVHVPPGPPFHPNLNVVRVAGSGGGGGGGAGDEGAGKEGWGGSNLGRDLP 227
Query: 74 TPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVS 133
TPKEICKGLD++VIGQ+RAKK +L AVYNHYKRIYH SLQK
Sbjct: 228 TPKEICKGLDKYVIGQDRAKK-----VL----------SVAVYNHYKRIYHQSLQK---- 268
Query: 134 DHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTI 193
G+ + + ++D VELEKSNVLLMGPTGSGKTLLAKTLAR VNVPF I
Sbjct: 269 ------GRSGADLGGFDGEADDDNNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVI 322
Query: 194 TDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNGRDV 252
DAT LTQAGYVGED ES+LYKLL ADF+V+AAQ+G+VYIDEVDKI K AES N RDV
Sbjct: 323 ADATTLTQAGYVGEDVESILYKLLTVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDV 382
Query: 253 SGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISE 312
SGEGVQQALLKMLEGT+VNVP + G RKHPRGDNI IDTKDILFICGGAFV LEKTISE
Sbjct: 383 SGEGVQQALLKMLEGTIVNVP--EKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISE 440
Query: 313 RRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLS 372
RRQDSSIGFGAPVRANMR GG + A VTSSLLESV+SGDL+AYGLIPEFIGRFPILVSL+
Sbjct: 441 RRQDSSIGFGAPVRANMRVGGTSSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLT 500
Query: 373 ALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRAL 432
ALNEDQLVQVL EPKNALG+Q+KK+FSMN+VKLHFTD ALR+IA+KAM+KNTGARGLR +
Sbjct: 501 ALNEDQLVQVLTEPKNALGKQFKKLFSMNDVKLHFTDGALRIIAEKAMSKNTGARGLRTI 560
Query: 433 LENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHETKS 492
LENIL ++M+EIP+ K G ++AV+VD++AVGSVD PG GAKIL+GDG L++ L K
Sbjct: 561 LENILMDSMYEIPDAKSGEKRIDAVVVDEDAVGSVDQPGYGAKILYGDGALDQYLSHIKV 620
Query: 493 A 493
A
Sbjct: 621 A 621
>gi|326501208|dbj|BAJ98835.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 328/537 (61%), Positives = 380/537 (70%), Gaps = 77/537 (14%)
Query: 2 VNFCPKCKTAFYFRPFKLTPLEGSFIELGKVKVEEIMGGF--------------IRKDGE 47
+N CP C+TA++F P L PL+G+F+E+G+V+ + G R DG+
Sbjct: 107 LNLCPNCRTAYFFHPNHLEPLQGTFVEIGRVRADLPPDGVRDPSSWKAIRASSSSRDDGD 166
Query: 48 SNGI------------------------------ESESETENGNRNRNSEGNIDLPTPKE 77
+G+ E + S D PTPKE
Sbjct: 167 GSGVAVHVPPGPPFHPSLNVVRVAGGGGGGGAAGGGAEEGGGKDGWGGSNLGKDFPTPKE 226
Query: 78 ICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLY 137
I KGLD++VIGQ+RAKK AVYNHYKRIYH SLQK
Sbjct: 227 ISKGLDKYVIGQDRAKKV---------------LSVAVYNHYKRIYHQSLQK-------- 263
Query: 138 VDSILGSGVKSGNCNVEND--EIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITD 195
GSG G + E D + VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPF I D
Sbjct: 264 -----GSGADLGCSDGEADGEDNVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIAD 318
Query: 196 ATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNGRDVSG 254
AT LTQAGYVGED ES+LYKLL+ ADF+V+AAQ+G+VYIDEVDKI K AES N RDVSG
Sbjct: 319 ATTLTQAGYVGEDVESILYKLLSVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSG 378
Query: 255 EGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERR 314
EGVQQALLKMLEGT+VNVP + G RKHPRGDNI IDTKDILFICGGAF+ LEKTISERR
Sbjct: 379 EGVQQALLKMLEGTIVNVP--EKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERR 436
Query: 315 QDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSAL 374
QDSSIGFGAPVRA+MRT G++ A VTSSLLESV+SGDL+AYGLIPEFIGRFPILVSLSAL
Sbjct: 437 QDSSIGFGAPVRASMRTSGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLSAL 496
Query: 375 NEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLE 434
NEDQLVQVL EPKNALG+Q+KK+FSMNNVKLHFTD ALR+IA+KAM KNTGARGLR +LE
Sbjct: 497 NEDQLVQVLTEPKNALGKQFKKLFSMNNVKLHFTDAALRIIAQKAMCKNTGARGLRTILE 556
Query: 435 NILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHETK 491
NIL ++M+EIP+TK G ++AV+VD+ AVG VD PGCGAKIL+GDG +R L + K
Sbjct: 557 NILMDSMYEIPDTKSGEKRIDAVVVDEGAVGLVDQPGCGAKILYGDGAFDRYLSQIK 613
>gi|357149621|ref|XP_003575175.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
isoform 2 [Brachypodium distachyon]
Length = 658
Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust.
Identities = 337/579 (58%), Positives = 395/579 (68%), Gaps = 102/579 (17%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKVKVEEIMGGF----------------IRK 44
A+N CP C+TA++FRP L PL+G+F+E+G+V+ + G R
Sbjct: 107 ALNLCPNCRTAYFFRPNILAPLQGTFVEIGRVRADFPPDGVRVRDPSFWEAIRASSSSRD 166
Query: 45 DGESNGI--------------------------ESESETENGNRNRNSEGNIDL----PT 74
DG+ +G+ + ++ G +L PT
Sbjct: 167 DGDGSGVAVHVPPGPPFHPNLNVVRVAGGGGGGGAGGGGGEEGGAKDGWGGSNLGKDFPT 226
Query: 75 PKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSD 134
PKEI KGLD++VIGQERAKK +L AVYNHYKRIYH S+QK
Sbjct: 227 PKEISKGLDKYVIGQERAKK-----VL----------SVAVYNHYKRIYHQSVQK----- 266
Query: 135 HLYVDSILGSGVKSGNCNVE--NDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFT 192
GSG G+ + E D+ VELEKSNVLLMGPTGSGKTLLAKTLAR VNVPF
Sbjct: 267 --------GSGADLGSSDGEADGDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFV 318
Query: 193 ITDATALT-----------QAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV 241
I DAT LT QAGYVGED ES+LYKLL ADF+V+AAQ+G+VYIDEVDKI
Sbjct: 319 IADATTLTQAIRLKFSNFLQAGYVGEDVESILYKLLTVADFNVQAAQQGMVYIDEVDKIT 378
Query: 242 K--------AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTK 293
K AES N RDVSGEGVQQALLKMLEGT+VNV P+ G RKHPRGDNI IDTK
Sbjct: 379 KKVSTFDMQAESLNISRDVSGEGVQQALLKMLEGTIVNV--PEKGARKHPRGDNIQIDTK 436
Query: 294 DILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLV 353
DILFICGGAF+ LEKTISERRQDSSIGFGAPVRA+MRTGG++ A VTSSLLESV+SGDL+
Sbjct: 437 DILFICGGAFIDLEKTISERRQDSSIGFGAPVRASMRTGGISSAQVTSSLLESVESGDLI 496
Query: 354 AYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALR 413
AYGLIPEFIGRFPILVSL+ALNEDQLVQVL EPKNALG+Q++K+FSMNNVKLHFTD ALR
Sbjct: 497 AYGLIPEFIGRFPILVSLAALNEDQLVQVLTEPKNALGKQFRKLFSMNNVKLHFTDSALR 556
Query: 414 LIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCG 473
+IAKKAM KNTGARGLR +LENIL ++M+EIP+TK G ++AV+VD++AVGSVD PGCG
Sbjct: 557 IIAKKAMCKNTGARGLRTILENILMDSMYEIPDTKSGEKRIDAVVVDEDAVGSVDRPGCG 616
Query: 474 AKILHGDGELERVLHETK-----SAHENDSEVLLKSPGA 507
AKIL+GDG + L + K + E D E L S A
Sbjct: 617 AKILYGDGSFDHYLSQIKAMGDGAGSEADGEADLSSSRA 655
>gi|215769357|dbj|BAH01586.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218190998|gb|EEC73425.1| hypothetical protein OsI_07697 [Oryza sativa Indica Group]
Length = 645
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 318/442 (71%), Positives = 356/442 (80%), Gaps = 38/442 (8%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLPTPKEIC+GLD++VIGQ+RAKK +L AVYNHYKRIYH SLQK
Sbjct: 228 DLPTPKEICQGLDKYVIGQDRAKK-----VL----------SVAVYNHYKRIYHKSLQK- 271
Query: 131 LVSDHLYVDSILGSGVKSGNCNVE--NDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVN 188
GSG G + E +D+ VELEKSNVLLMGPTGSGKTLLAKTLAR VN
Sbjct: 272 ------------GSGADLGGFDGEADDDDGVELEKSNVLLMGPTGSGKTLLAKTLARFVN 319
Query: 189 VPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRN 247
VPF I DAT LTQAGYVGED ES+LYKLLA ADF+V+AAQ+G+VYIDEVDKI K AES N
Sbjct: 320 VPFVIADATTLTQAGYVGEDVESILYKLLAVADFNVQAAQQGMVYIDEVDKITKKAESLN 379
Query: 248 NGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLE 307
RDVSGEGVQQALLKMLEGT+VNVP + G RKHPRGDNI IDTKDILFICGGAF+ LE
Sbjct: 380 ISRDVSGEGVQQALLKMLEGTIVNVP--EKGARKHPRGDNIQIDTKDILFICGGAFIDLE 437
Query: 308 KTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPI 367
KTISERRQDSSIGFGAPVRANMR GG++ A VTSSLLESV+SGDL+AYGLIPEFIGRFPI
Sbjct: 438 KTISERRQDSSIGFGAPVRANMRAGGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPI 497
Query: 368 LVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGAR 427
LVSL+ALNEDQLVQVLMEPKNALG+Q+KK+FSMNNVKLHFTD ALR+IAKKAM+KNTGAR
Sbjct: 498 LVSLAALNEDQLVQVLMEPKNALGKQFKKLFSMNNVKLHFTDAALRIIAKKAMSKNTGAR 557
Query: 428 GLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVL 487
GLR +LENIL +AM+EIP+ K G ++AV+VD++AVG+VD PGCGAKIL+GDG ER L
Sbjct: 558 GLRTILENILMDAMYEIPDAKSGEKRIDAVVVDEDAVGAVDQPGCGAKILYGDGAFERYL 617
Query: 488 HETKSA-----HENDSEVLLKS 504
+ K A E D E L S
Sbjct: 618 SQIKVAGDAAGSEADGEAELSS 639
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 34/48 (70%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKVKVEEIMGGFIRKDGES 48
A+N CP C++A++FRP L PL+G+F+E+G+V+ + + +R G S
Sbjct: 104 ALNLCPNCRSAYFFRPHLLAPLQGTFVEIGRVRADLLPHDAVRARGAS 151
>gi|356561766|ref|XP_003549149.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Glycine max]
Length = 711
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 309/428 (72%), Positives = 350/428 (81%), Gaps = 32/428 (7%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D P+PKEICKGLD+FVIGQ+RAKK +L AVYNHYKRIYH++LQK
Sbjct: 292 DFPSPKEICKGLDKFVIGQQRAKK-----VL----------SVAVYNHYKRIYHATLQK- 335
Query: 131 LVSDHLYVDSILGSGVKSGNCNV-ENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNV 189
GS SG V ++D+ VELEKSNVLLMGPTGSGKTLLAKTLAR VNV
Sbjct: 336 ------------GSAADSGVSEVLDDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNV 383
Query: 190 PFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNN 248
PF +TDAT LTQAGYVGED ES+LYKLL +DF+V AAQ+GI+YIDEVDKI K ++S N
Sbjct: 384 PFVVTDATTLTQAGYVGEDVESILYKLLTVSDFNVAAAQQGIIYIDEVDKITKKSKSLNI 443
Query: 249 GRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEK 308
RDVSGEGVQQALLKMLEGT+VNVP + G RKHPRGDNI +DTK+ILFICGGAF+ LEK
Sbjct: 444 SRDVSGEGVQQALLKMLEGTIVNVP--EKGARKHPRGDNIQMDTKNILFICGGAFIDLEK 501
Query: 309 TISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
TISERRQDSSIGFGAPVRANMR GG+TD+ VTSSLLESV+S DL+AYGLIPEFIGRFPIL
Sbjct: 502 TISERRQDSSIGFGAPVRANMRAGGITDSAVTSSLLESVESADLIAYGLIPEFIGRFPIL 561
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
VSLSAL EDQL+ VL EPKNALG+QYKK+FSMNNVKLHFT+ ALRLIAKKAMAKNTGARG
Sbjct: 562 VSLSALTEDQLMMVLTEPKNALGKQYKKLFSMNNVKLHFTEKALRLIAKKAMAKNTGARG 621
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLH 488
LRALLENILTEAMFEIP+ K G+ V+AV++D+E+VGS+ APGCG KIL GDG LE+ L
Sbjct: 622 LRALLENILTEAMFEIPDIKTGSDRVDAVVIDEESVGSLTAPGCGGKILRGDGALEQYLA 681
Query: 489 ETKSAHEN 496
+ K + N
Sbjct: 682 KMKDSAVN 689
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 28/32 (87%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKV 32
+VN CP CKTA+YFRP+ TPL+G+F+E+G+V
Sbjct: 117 SVNLCPSCKTAYYFRPYDTTPLQGTFVEIGRV 148
>gi|255557853|ref|XP_002519956.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis]
gi|223541002|gb|EEF42560.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis]
Length = 698
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 312/423 (73%), Positives = 351/423 (82%), Gaps = 32/423 (7%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLPTPKEIC+GLD+FVIGQ+RAKK +L AVYNHYKRIYH+SL+K
Sbjct: 277 DLPTPKEICRGLDKFVIGQDRAKK-----VL----------SVAVYNHYKRIYHASLKK- 320
Query: 131 LVSDHLYVDSILGSGVKSGNCN-VENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNV 189
G G +SG+ + V++D+ VELEKSNVLLMGPTGSGKTLLAKTLAR VNV
Sbjct: 321 ------------GPGEESGSSDAVDDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNV 368
Query: 190 PFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNN 248
PF I DATALTQAGYVGED ES+LYKLL+ A+F+V+AAQ+GIVYIDEVDKI K AES N
Sbjct: 369 PFVIADATALTQAGYVGEDVESILYKLLSVAEFNVQAAQQGIVYIDEVDKITKKAESLNI 428
Query: 249 GRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEK 308
RDVSGEGVQQALLKMLEGT+VNVP + G RKHPRGDNI IDTKDILFICGGAFV LEK
Sbjct: 429 SRDVSGEGVQQALLKMLEGTIVNVP--EKGARKHPRGDNIQIDTKDILFICGGAFVDLEK 486
Query: 309 TISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
TISERRQDSSIGFGAPVRANMR GG+T+A VTSSLLESV+S DL+AYGLIPEFIGRFPIL
Sbjct: 487 TISERRQDSSIGFGAPVRANMRAGGVTNAAVTSSLLESVESADLIAYGLIPEFIGRFPIL 546
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
VSLSAL EDQLV+VL EPKNALG+QYKK+FSMN VKLHFT+ ALRLIAKKAMAKNTGARG
Sbjct: 547 VSLSALTEDQLVRVLTEPKNALGKQYKKLFSMNKVKLHFTEKALRLIAKKAMAKNTGARG 606
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLH 488
LRA+LE+ LTEAM+EIP+ K G+ V+AV+VD+E++GSV+A G G KIL GDG LE L
Sbjct: 607 LRAILESTLTEAMYEIPDVKTGSDRVDAVIVDEESIGSVNASGHGGKILRGDGALESYLA 666
Query: 489 ETK 491
E K
Sbjct: 667 EYK 669
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 31/32 (96%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKV 32
AVNFCP CKTA+YFRP+K+TPL+GSFIE+G+V
Sbjct: 127 AVNFCPSCKTAYYFRPYKITPLQGSFIEIGRV 158
>gi|449450117|ref|XP_004142810.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Cucumis sativus]
Length = 619
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 325/506 (64%), Positives = 376/506 (74%), Gaps = 63/506 (12%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKVK------------VEEIMGGFI------ 42
A+N CP CKTAFYFRP KL PL G+FIE+G+VK + G I
Sbjct: 104 ALNLCPNCKTAFYFRPLKLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCAD 163
Query: 43 ------RKDGESNGIESE--SETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKK 94
R++G G + S +G + + + L TPKEI LD+FV+GQE+AKK
Sbjct: 164 DFALPPRRNGSCGGSDDNLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKK 223
Query: 95 SHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVE 154
AVYNHYKRIYHSSLQK SG +E
Sbjct: 224 V---------------LSVAVYNHYKRIYHSSLQKT-------------SGQGPLGIELE 255
Query: 155 ND--EIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESV 212
ND E VELEKSN+LLMGPTGSGKTLLAKTLAR+VNVPFTI DATALTQAGYVGED ES+
Sbjct: 256 NDDNETVELEKSNLLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESI 315
Query: 213 LYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNGRDVSGEGVQQALLKMLEGTVVN 271
LYKLL A+F+VEAAQRGIVYIDEVDKI K +ES N+GRDVSGEGVQQALLKMLEGTVV+
Sbjct: 316 LYKLLLDAEFNVEAAQRGIVYIDEVDKITKKSESLNSGRDVSGEGVQQALLKMLEGTVVD 375
Query: 272 VPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRT 331
VP D G RKHPRGD I +DTK+ILFICGGAFVGLEK IS+R+ DSSIGFGAPVRA+MRT
Sbjct: 376 VP--DTGARKHPRGDTIQMDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRT 433
Query: 332 GGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALG 391
G LT+ LVTSS+LE+V+SGDL+ YGLIPEF+GR PILVSLSAL+EDQLVQVL +PKNALG
Sbjct: 434 GKLTEDLVTSSMLENVESGDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALG 493
Query: 392 RQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGT 451
+QYKKM MN+V+LHFT++ALR+IA+KAM KNTGARGLR++LENILTEAMFE+PE +
Sbjct: 494 KQYKKMLRMNDVELHFTENALRMIARKAMKKNTGARGLRSILENILTEAMFEVPE----S 549
Query: 452 SSVNAVLVDKEAVGSVDAPGCGAKIL 477
+S+ AVLVD+EAVGSVDA GCGAKIL
Sbjct: 550 NSIKAVLVDEEAVGSVDASGCGAKIL 575
>gi|242062022|ref|XP_002452300.1| hypothetical protein SORBIDRAFT_04g023280 [Sorghum bicolor]
gi|241932131|gb|EES05276.1| hypothetical protein SORBIDRAFT_04g023280 [Sorghum bicolor]
Length = 640
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 308/424 (72%), Positives = 346/424 (81%), Gaps = 33/424 (7%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLPTPKEICKGLD++VIGQ+RAKK AVYNHYKRIYH SLQK
Sbjct: 227 DLPTPKEICKGLDKYVIGQDRAKKV---------------LSVAVYNHYKRIYHQSLQK- 270
Query: 131 LVSDHLYVDSILGSGVKSGNCNVE--NDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVN 188
GSG G + E +D+ VELEKSNVLLMGPTGSGKTLLAKTLAR VN
Sbjct: 271 ------------GSGADLGGFDGEADDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVN 318
Query: 189 VPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRN 247
VPF I DAT LTQAGYVGED ES+LYKLL ADF+V+AAQ+G+VYIDEVDKI K AES N
Sbjct: 319 VPFVIADATTLTQAGYVGEDVESILYKLLTVADFNVQAAQQGMVYIDEVDKITKKAESLN 378
Query: 248 NGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLE 307
RDVSGEGVQQALLKMLEGT+VNVP + G RKHPRGDNI IDTKDILFICGGAFV LE
Sbjct: 379 ISRDVSGEGVQQALLKMLEGTIVNVP--EKGARKHPRGDNIQIDTKDILFICGGAFVDLE 436
Query: 308 KTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPI 367
KTISERRQDSSIGFGAPVRANMR GG++ A VTSSLLESV+SGDL+AYGLIPEFIGRFPI
Sbjct: 437 KTISERRQDSSIGFGAPVRANMRAGGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPI 496
Query: 368 LVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGAR 427
LVSL+ALNEDQLVQVL EPKNALG+Q+KK+FSMNNVKLHFTD ALR+IAKKAM+KNTGAR
Sbjct: 497 LVSLAALNEDQLVQVLTEPKNALGKQFKKLFSMNNVKLHFTDGALRIIAKKAMSKNTGAR 556
Query: 428 GLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVL 487
GLR +LE IL ++M+EIP+ + G ++AV+VD++AVGSVD PGCGAKIL+GDG L++ L
Sbjct: 557 GLRTILETILMDSMYEIPDARSGEKRIDAVVVDEDAVGSVDQPGCGAKILYGDGALDQYL 616
Query: 488 HETK 491
+ K
Sbjct: 617 SQIK 620
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 29/35 (82%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKVKVE 35
A+N CP C++A++FRP L PL+G+F+E+G+V+ +
Sbjct: 110 ALNLCPNCRSAYFFRPHVLAPLQGTFVEIGRVRAD 144
>gi|222623077|gb|EEE57209.1| hypothetical protein OsJ_07170 [Oryza sativa Japonica Group]
Length = 583
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 317/456 (69%), Positives = 354/456 (77%), Gaps = 52/456 (11%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLPTPKEIC+GLD++VIGQ+RAKK AVYNHYKRIYH SLQK
Sbjct: 152 DLPTPKEICQGLDKYVIGQDRAKKV---------------LSVAVYNHYKRIYHKSLQK- 195
Query: 131 LVSDHLYVDSILGSGVKSGNCNVE--NDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVN 188
GSG G + E +D+ VELEKSNVLLMGPTGSGKTLLAKTLAR VN
Sbjct: 196 ------------GSGADLGGFDGEADDDDGVELEKSNVLLMGPTGSGKTLLAKTLARFVN 243
Query: 189 VPFTITDATALTQA--------------GYVGEDAESVLYKLLAAADFDVEAAQRGIVYI 234
VPF I DAT LTQA GYVGED ES+LYKLLA ADF+V+AAQ+G+VYI
Sbjct: 244 VPFVIADATTLTQAIPKVKLNSCAFLQAGYVGEDVESILYKLLAVADFNVQAAQQGMVYI 303
Query: 235 DEVDKIVK-AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTK 293
DEVDKI K AES N RDVSGEGVQQALLKMLEGT+VNVP + G RKHPRGDNI IDTK
Sbjct: 304 DEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP--EKGARKHPRGDNIQIDTK 361
Query: 294 DILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLV 353
DILFICGGAF+ LEKTISERRQDSSIGFGAPVRANMR GG++ A VTSSLLESV+SGDL+
Sbjct: 362 DILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRAGGISSAQVTSSLLESVESGDLI 421
Query: 354 AYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALR 413
AYGLIPEFIGRFPILVSL+ALNEDQLVQVLMEPKNALG+Q+KK+FSMNNVKLHFTD ALR
Sbjct: 422 AYGLIPEFIGRFPILVSLAALNEDQLVQVLMEPKNALGKQFKKLFSMNNVKLHFTDAALR 481
Query: 414 LIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCG 473
+IAKKAM+KNTGARGLR +LENIL +AM+EIP+ K G ++AV+VD++AVG+VD PGCG
Sbjct: 482 IIAKKAMSKNTGARGLRTILENILMDAMYEIPDAKSGEKRIDAVVVDEDAVGAVDQPGCG 541
Query: 474 AKILHGDGELERVLHETKSA-----HENDSEVLLKS 504
AKIL+GDG ER L + K A E D E L S
Sbjct: 542 AKILYGDGAFERYLSQIKVAGDAAGSEADGEAELSS 577
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 34/48 (70%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKVKVEEIMGGFIRKDGES 48
A+N CP C++A++FRP L PL+G+F+E+G+V+ + + +R G S
Sbjct: 28 ALNLCPNCRSAYFFRPHLLAPLQGTFVEIGRVRADLLPHDAVRARGAS 75
>gi|356529352|ref|XP_003533258.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Glycine max]
Length = 713
Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust.
Identities = 308/428 (71%), Positives = 349/428 (81%), Gaps = 32/428 (7%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D P+PKEICKGLD+FVIGQ+RAKK +L AVYNHYKRIYH++LQK
Sbjct: 294 DFPSPKEICKGLDKFVIGQQRAKK-----VL----------SVAVYNHYKRIYHATLQK- 337
Query: 131 LVSDHLYVDSILGSGVKSGNCNV-ENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNV 189
GS SG V ++D+ VELEKSNVLLMGPTGSGKTLLAKTLAR VNV
Sbjct: 338 ------------GSAADSGASEVLDDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNV 385
Query: 190 PFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNN 248
PF I DAT LTQAGYVGED ES+LYKLL +DF+V AAQ+GI+YIDEVDKI K AES N
Sbjct: 386 PFVIADATTLTQAGYVGEDVESILYKLLVVSDFNVAAAQQGIIYIDEVDKITKKAESLNI 445
Query: 249 GRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEK 308
RDVSGEGVQQALLKMLEGT+VNVP + G RK+PRGDNI +DTK+ILFICGGAF+ LEK
Sbjct: 446 SRDVSGEGVQQALLKMLEGTIVNVP--EKGARKNPRGDNIQMDTKNILFICGGAFIDLEK 503
Query: 309 TISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
TISERRQDSSIGFGAPVRANMR G+TD+ VTSSLLESV+S DL+AYGLIPEFIGRFPIL
Sbjct: 504 TISERRQDSSIGFGAPVRANMRAVGITDSAVTSSLLESVESADLIAYGLIPEFIGRFPIL 563
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
VSLSAL EDQL VL EPKNALG+QYKK+FSMNNVKLHFT++ALRLIAKKAMAKNTGARG
Sbjct: 564 VSLSALTEDQLTMVLTEPKNALGKQYKKLFSMNNVKLHFTENALRLIAKKAMAKNTGARG 623
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLH 488
LRALLE+ILTEAMFEIP+ K G+ V+AV++D+E+VGS+ APGCG KILHGDG L++ L
Sbjct: 624 LRALLESILTEAMFEIPDIKTGSDRVDAVVIDEESVGSLTAPGCGGKILHGDGALKQYLA 683
Query: 489 ETKSAHEN 496
+ K + N
Sbjct: 684 KMKDSAVN 691
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 28/32 (87%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKV 32
+VN CP CKTA+YFRP+ TPL+G+F+E+G+V
Sbjct: 115 SVNLCPSCKTAYYFRPYDTTPLQGTFVEIGRV 146
>gi|359493519|ref|XP_002264217.2| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Vitis vinifera]
Length = 685
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 323/435 (74%), Positives = 355/435 (81%), Gaps = 34/435 (7%)
Query: 60 GNRNRNSEGNI--DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYN 117
G RN N+ DLPTPKEICKGLD+FVIGQERAKK +L AVYN
Sbjct: 253 GERNGWGGSNLGKDLPTPKEICKGLDKFVIGQERAKK-----VL----------SVAVYN 297
Query: 118 HYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKT 177
HYKRIYH SLQK GSG +SG V++D VELEKSNVLLMGPTGSGKT
Sbjct: 298 HYKRIYHGSLQK-------------GSGAESGTSEVDDDS-VELEKSNVLLMGPTGSGKT 343
Query: 178 LLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEV 237
LLAKTLAR VNVPF I DAT LTQAGYVGED ES+LYKLL A+F+V+AAQ+G+VYIDEV
Sbjct: 344 LLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVAEFNVQAAQQGMVYIDEV 403
Query: 238 DKIVK-AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDIL 296
DKI K AES N RDVSGEGVQQALLKMLEGT+VNVP + G RKHPRGDNI IDTKDIL
Sbjct: 404 DKITKKAESLNLSRDVSGEGVQQALLKMLEGTIVNVP--EKGARKHPRGDNIQIDTKDIL 461
Query: 297 FICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYG 356
FICGGAFV LEKTIS+RRQDSSIGFGAPVRANMRTGGLT+A+VTSSLLESV+S DL+AYG
Sbjct: 462 FICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRTGGLTNAVVTSSLLESVESSDLIAYG 521
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
LIPEFIGRFPILVSLSAL EDQLV+VL EPKNALG+QYKK+FSMNNVKLHFT+ ALR IA
Sbjct: 522 LIPEFIGRFPILVSLSALTEDQLVKVLTEPKNALGKQYKKLFSMNNVKLHFTEKALRQIA 581
Query: 417 KKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKI 476
KKAM KNTGARGLRALLE+ILTEAM+EIP+ K G V+AV+VD+E+VGSV+APGCG KI
Sbjct: 582 KKAMVKNTGARGLRALLESILTEAMYEIPDVKTGKDRVDAVVVDEESVGSVNAPGCGGKI 641
Query: 477 LHGDGELERVLHETK 491
L GDG L+ L ETK
Sbjct: 642 LRGDGALDCYLAETK 656
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 28/31 (90%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGK 31
AVN CP CKTA+YFRP+K+ PL+GSF+E+G+
Sbjct: 119 AVNLCPNCKTAYYFRPYKIAPLQGSFVEIGR 149
>gi|46390353|dbj|BAD15818.1| putative ATP-dependent Clp protease ATP-binding subunit ClpX1
(CLPX) [Oryza sativa Japonica Group]
Length = 666
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 318/463 (68%), Positives = 356/463 (76%), Gaps = 59/463 (12%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLPTPKEIC+GLD++VIGQ+RAKK +L AVYNHYKRIYH SLQK
Sbjct: 228 DLPTPKEICQGLDKYVIGQDRAKK-----VL----------SVAVYNHYKRIYHKSLQK- 271
Query: 131 LVSDHLYVDSILGSGVKSGNCNVE--NDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVN 188
GSG G + E +D+ VELEKSNVLLMGPTGSGKTLLAKTLAR VN
Sbjct: 272 ------------GSGADLGGFDGEADDDDGVELEKSNVLLMGPTGSGKTLLAKTLARFVN 319
Query: 189 VPFTITDATALTQA--------------GYVGEDAESVLYKLLAAADFDVEAAQRGIVYI 234
VPF I DAT LTQA GYVGED ES+LYKLLA ADF+V+AAQ+G+VYI
Sbjct: 320 VPFVIADATTLTQAIPKVKLNSCAFLQAGYVGEDVESILYKLLAVADFNVQAAQQGMVYI 379
Query: 235 DEVDKIVK--------AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGD 286
DEVDKI K AES N RDVSGEGVQQALLKMLEGT+VNVP + G RKHPRGD
Sbjct: 380 DEVDKITKKADVFNMQAESLNISRDVSGEGVQQALLKMLEGTIVNVP--EKGARKHPRGD 437
Query: 287 NIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLES 346
NI IDTKDILFICGGAF+ LEKTISERRQDSSIGFGAPVRANMR GG++ A VTSSLLES
Sbjct: 438 NIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRAGGISSAQVTSSLLES 497
Query: 347 VDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLH 406
V+SGDL+AYGLIPEFIGRFPILVSL+ALNEDQLVQVLMEPKNALG+Q+KK+FSMNNVKLH
Sbjct: 498 VESGDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLMEPKNALGKQFKKLFSMNNVKLH 557
Query: 407 FTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
FTD ALR+IAKKAM+KNTGARGLR +LENIL +AM+EIP+ K G ++AV+VD++AVG+
Sbjct: 558 FTDAALRIIAKKAMSKNTGARGLRTILENILMDAMYEIPDAKSGEKRIDAVVVDEDAVGA 617
Query: 467 VDAPGCGAKILHGDGELERVLHETKSA-----HENDSEVLLKS 504
VD PGCGAKIL+GDG ER L + K A E D E L S
Sbjct: 618 VDQPGCGAKILYGDGAFERYLSQIKVAGDAAGSEADGEAELSS 660
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 34/48 (70%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKVKVEEIMGGFIRKDGES 48
A+N CP C++A++FRP L PL+G+F+E+G+V+ + + +R G S
Sbjct: 104 ALNLCPNCRSAYFFRPHLLAPLQGTFVEIGRVRADLLPHDAVRARGAS 151
>gi|356576571|ref|XP_003556404.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Glycine max]
Length = 513
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 312/457 (68%), Positives = 350/457 (76%), Gaps = 46/457 (10%)
Query: 41 FIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCI 100
FIR G +G S N R D PTPKEICKGLD+FVIGQ RAKK
Sbjct: 80 FIRASGPRDGWVGGS-----NLGR------DFPTPKEICKGLDKFVIGQHRAKKV----- 123
Query: 101 LVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVE 160
AVYNHY+RIY S E +S L ++ + VE
Sbjct: 124 ----------LSVAVYNHYQRIYQGSEADEGLSQGL-----------------DDGDDVE 156
Query: 161 LEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAA 220
LEKSNVLLMGPTGSGKTLLAKTLAR VNVPF I DAT LTQAGYVGED ES+LYKLLAAA
Sbjct: 157 LEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLAAA 216
Query: 221 DFDVEAAQRGIVYIDEVDKIVK-AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGP 279
+F+V+AAQ+GIVYIDEVDKI K AES N RDVSGEGVQQALLKMLEGT+VNVP + G
Sbjct: 217 EFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTMVNVP--ERGA 274
Query: 280 RKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALV 339
RKHPRGDNI IDTK+ILFICGGAF+ LEKTISERRQDSSIGFG+PVR+NMRTGG+T+A V
Sbjct: 275 RKHPRGDNIQIDTKNILFICGGAFIDLEKTISERRQDSSIGFGSPVRSNMRTGGVTNAAV 334
Query: 340 TSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFS 399
TSSLLESV+S DL+AYGLIPEFIGRFPIL+SLSAL EDQL+QVL EPKNAL +QYKK+F+
Sbjct: 335 TSSLLESVESADLIAYGLIPEFIGRFPILISLSALTEDQLMQVLTEPKNALAKQYKKLFN 394
Query: 400 MNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLV 459
MNNVKLHFT+ ALRLIAKKAMAKNTGARGLRALLE+ILTEAMFEIP+ K G + AV+V
Sbjct: 395 MNNVKLHFTEKALRLIAKKAMAKNTGARGLRALLESILTEAMFEIPDVKAGNELIGAVVV 454
Query: 460 DKEAVGSVDAPGCGAKILHGDGELERVLHETKSAHEN 496
D+E+VGSV+APGCG KIL GDG LE L + + + N
Sbjct: 455 DEESVGSVNAPGCGGKILCGDGALELYLAKMEGSVAN 491
>gi|147770637|emb|CAN64542.1| hypothetical protein VITISV_013764 [Vitis vinifera]
Length = 730
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 324/462 (70%), Positives = 360/462 (77%), Gaps = 44/462 (9%)
Query: 60 GNRNRNSEGNI--DLPTPKEICKGLDEFVIGQERAKK-SHIFCILVDM----LVYVIGAC 112
G RN N+ DLPTPKEICKGLD+FVIGQERAKK S I +V++ +
Sbjct: 253 GERNGWGGSNLGKDLPTPKEICKGLDKFVIGQERAKKFSGIEVYIVEIGKWGHSFKRSNW 312
Query: 113 C--------AVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKS 164
C AVYNHYKRIYH SLQK GSG +SG V++D VELEKS
Sbjct: 313 CQTWEVLSVAVYNHYKRIYHGSLQK-------------GSGAESGTSEVDDDS-VELEKS 358
Query: 165 NVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDV 224
NVLLMGPTGSGKTLLAKTLAR VNVPF I DAT LTQAGYVGED ES+LYKLL A+F+V
Sbjct: 359 NVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVAEFNV 418
Query: 225 EAAQRGIVYIDEVDKIVK-AESRNNGRDVSGEGVQQALLKMLEGTVVN------------ 271
+AAQ+G+VYIDEVDKI K AES N RDVSGEGVQQALLKMLEGT +
Sbjct: 419 QAAQQGMVYIDEVDKITKKAESLNLSRDVSGEGVQQALLKMLEGTDLKWSGYKILRGIKQ 478
Query: 272 --VPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANM 329
V +P+ G RKHPRGDNI IDTKDILFICGGAFV LEKTIS+RRQDSSIGFGAPVRANM
Sbjct: 479 XIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANM 538
Query: 330 RTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNA 389
RTGGLT+A+VTSSLLESV+S DL+AYGLIPEFIGRFPILVSLSAL EDQLV+VL EPKNA
Sbjct: 539 RTGGLTNAVVTSSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEDQLVKVLTEPKNA 598
Query: 390 LGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKI 449
LG+QYKK+FSMNNVKLHFT+ ALR IAKKAM KNTGARGLRALLE+ILTEAM+EIP+ K
Sbjct: 599 LGKQYKKLFSMNNVKLHFTEKALRQIAKKAMVKNTGARGLRALLESILTEAMYEIPDVKT 658
Query: 450 GTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHETK 491
G V+AV+VD+E+VGSV+APGCG KIL GDG L+ L ETK
Sbjct: 659 GKDRVDAVVVDEESVGSVNAPGCGGKILRGDGALDCYLAETK 700
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 28/31 (90%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGK 31
AVN CP CKTA+YFRP+K+ PL+GSF+E+G+
Sbjct: 119 AVNLCPNCKTAYYFRPYKIAPLQGSFVEIGR 149
>gi|449447519|ref|XP_004141515.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Cucumis sativus]
gi|449510687|ref|XP_004163734.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Cucumis sativus]
Length = 699
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 309/423 (73%), Positives = 349/423 (82%), Gaps = 32/423 (7%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLPTPKEICKGLD+FVIGQE+AKK +L AV+NHYKRIYH+SLQK
Sbjct: 280 DLPTPKEICKGLDKFVIGQEKAKK-----VL----------SVAVHNHYKRIYHASLQK- 323
Query: 131 LVSDHLYVDSILGSGVKSGNCN-VENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNV 189
GSG +SG + V++D+ VELEKSNVLLMGPTGSGKTLLAKTLAR VNV
Sbjct: 324 ------------GSGNESGTQDTVDDDDSVELEKSNVLLMGPTGSGKTLLAKTLARFVNV 371
Query: 190 PFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNN 248
PF + DAT LTQAGYVGED ES+LYKLLAAA+F+V+AAQ+G++YIDEVDKI K AES N
Sbjct: 372 PFVLADATTLTQAGYVGEDVESILYKLLAAAEFNVQAAQQGMIYIDEVDKITKKAESLNI 431
Query: 249 GRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEK 308
RDVSGEGVQQALLKMLEGT+VNVP + G RKHPRGDNI IDTKDILFICGGAFV LEK
Sbjct: 432 SRDVSGEGVQQALLKMLEGTIVNVP--EKGSRKHPRGDNIQIDTKDILFICGGAFVDLEK 489
Query: 309 TISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
TIS+RRQDSSIGFGAPVRANMR GG T A VTSSLLESV+S DL+AYGLIPEFIGRFPIL
Sbjct: 490 TISDRRQDSSIGFGAPVRANMRIGGATSAAVTSSLLESVESSDLIAYGLIPEFIGRFPIL 549
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
VSL AL EDQLVQVL EPKNALG+QYKK+F MN VKLH+T+ ALR+IAKKA+AKNTGARG
Sbjct: 550 VSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTEKALRMIAKKAIAKNTGARG 609
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLH 488
LRA+LE+ILTEAM+EIP+ K G V+AV+VD+E+VG +++ GCG KIL GDG LER L
Sbjct: 610 LRAILESILTEAMYEIPDVKTGIERVDAVVVDEESVGPLNSRGCGGKILRGDGALERYLA 669
Query: 489 ETK 491
ETK
Sbjct: 670 ETK 672
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKVKVEEIMGGFIR---KDGESNGIESESET 57
AVN CP CKTA+YFRP+K+ PL+GSFIE+G + + R KDG+ N I S+
Sbjct: 135 AVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSERRITTKDGKGNAIAGFSD- 193
Query: 58 ENGNRNR 64
EN NR
Sbjct: 194 ENYVNNR 200
>gi|255551247|ref|XP_002516670.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis]
gi|223544165|gb|EEF45689.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis]
Length = 565
Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust.
Identities = 301/440 (68%), Positives = 347/440 (78%), Gaps = 35/440 (7%)
Query: 55 SETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCA 114
S +++G + GN + PTPKEIC+GLD+FVIGQ+RAKK +L A
Sbjct: 130 SNSKDGCWGGSDLGN-NFPTPKEICRGLDKFVIGQDRAKK-----VL----------SVA 173
Query: 115 VYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVE--NDEIVELEKSNVLLMGPT 172
VYNHYKRIYH S+QK D SGN E +++ VELEKSN+LLMGPT
Sbjct: 174 VYNHYKRIYHDSIQKWSAGD-------------SGNNKAEAMDEDGVELEKSNILLMGPT 220
Query: 173 GSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIV 232
GSGKTLLAKTLAR VNVPF I DAT LTQAGYVGED ES+LYKLL AAD++V AAQ+GIV
Sbjct: 221 GSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMAADYNVAAAQQGIV 280
Query: 233 YIDEVDKIVK-AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPID 291
YIDEVDKI K AES N RDVSGEGVQQALLKMLEGTVVNVP + G RKHPRGDNI ID
Sbjct: 281 YIDEVDKITKKAESVNISRDVSGEGVQQALLKMLEGTVVNVP--EKGARKHPRGDNIQID 338
Query: 292 TKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGD 351
TKDILFICGGAF+ LEKTISERRQDSSIGFGAPVRANMR G +T A VTSSLLE+V+SGD
Sbjct: 339 TKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRMGSVTSAAVTSSLLETVESGD 398
Query: 352 LVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDA 411
L++YGLIPEF+GRFP+LVSLSAL E+QLVQVL EPKNALG+QYKKMF MN V+LHFT++A
Sbjct: 399 LISYGLIPEFVGRFPVLVSLSALTENQLVQVLTEPKNALGKQYKKMFQMNGVRLHFTENA 458
Query: 412 LRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPG 471
LRLIAKKA+ KNTGARGLRA+LENIL +AM+EIP+ K G ++AV+VD+EAVG+ + G
Sbjct: 459 LRLIAKKAITKNTGARGLRAILENILMDAMYEIPDVKTGEDIIDAVVVDEEAVGT-EGCG 517
Query: 472 CGAKILHGDGELERVLHETK 491
G +IL+G G L+R L E K
Sbjct: 518 TGGRILYGKGALDRYLAENK 537
>gi|449456973|ref|XP_004146223.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Cucumis sativus]
Length = 571
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 296/430 (68%), Positives = 345/430 (80%), Gaps = 32/430 (7%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+ PTPKEI KGLD+FVIGQERAKK V +G VYNHYKRIYH SLQ+
Sbjct: 154 NFPTPKEIAKGLDKFVIGQERAKK-----------VLSVG----VYNHYKRIYHESLQRP 198
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
D + + +D+ VELEKSN+LLMGPTGSGKTLLAKTLAR VNVP
Sbjct: 199 -TGDTF-----------NNKADAADDDKVELEKSNILLMGPTGSGKTLLAKTLARFVNVP 246
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNG 249
F I DAT LTQAGYVGED ES+LYKLL AD++V AAQ+GIVYIDEVDKI K AES N
Sbjct: 247 FVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNIS 306
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLKMLEGT+VNVP + G RKHPRG+NI IDTKDILFICGGAF+ LEKT
Sbjct: 307 RDVSGEGVQQALLKMLEGTIVNVP--EKGARKHPRGENIQIDTKDILFICGGAFIDLEKT 364
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
ISERRQDSS+GFGAPVRANMR GG+TDA+VTSSLLE+V+S DL+AYGLIPEF+GRFPILV
Sbjct: 365 ISERRQDSSLGFGAPVRANMRAGGVTDAMVTSSLLETVESSDLIAYGLIPEFVGRFPILV 424
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SLSAL E+QLVQVL EPKNALG+QY+KMF MN+VKLHFT+++LRLIA+KAM+KNTGARGL
Sbjct: 425 SLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHFTENSLRLIARKAMSKNTGARGL 484
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHE 489
R++LEN+L ++M+EIP+ + G ++AV+VD+E+VGS D+PG GAKIL+G G L+R L
Sbjct: 485 RSILENLLMDSMYEIPDVRTGKDIIDAVIVDEESVGS-DSPGFGAKILYGKGALDRHLSG 543
Query: 490 TKSAHENDSE 499
K A DSE
Sbjct: 544 QK-ATSQDSE 552
>gi|307135876|gb|ADN33742.1| ATP-dependent clp protease ATP-binding subunit clpx [Cucumis melo
subsp. melo]
Length = 571
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 296/430 (68%), Positives = 345/430 (80%), Gaps = 32/430 (7%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+ PTPKEI KGLD+FVIGQ+RAKK V +G VYNHYKRIYH SLQ+
Sbjct: 154 NFPTPKEIAKGLDKFVIGQDRAKK-----------VLSVG----VYNHYKRIYHESLQRP 198
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
D + + +D+ VELEKSN+LLMGPTGSGKTLLAKTLAR VNVP
Sbjct: 199 -TGDAF-----------NNKADAADDDKVELEKSNILLMGPTGSGKTLLAKTLARFVNVP 246
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNG 249
F I DAT LTQAGYVGED ES+LYKLL AD++V AAQ+GIVYIDEVDKI K AES N
Sbjct: 247 FVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNIS 306
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLKMLEGT+VNVP + G RKHPRG+NI IDTKDILFICGGAF+ LEKT
Sbjct: 307 RDVSGEGVQQALLKMLEGTIVNVP--EKGARKHPRGENIQIDTKDILFICGGAFIDLEKT 364
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
ISERRQDSS+GFGAPVRANMR GG+TDA+VTSSLLE+V+S DL+AYGLIPEF+GRFPILV
Sbjct: 365 ISERRQDSSLGFGAPVRANMRAGGVTDAMVTSSLLETVESSDLIAYGLIPEFVGRFPILV 424
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SLSAL E+QLVQVL EPKNALG+QY+KMF MN+VKLHFT++ALRLIA+KAM+KNTGARGL
Sbjct: 425 SLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHFTENALRLIARKAMSKNTGARGL 484
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHE 489
R++LEN+L ++M+EIP+ + G ++AV+VD+E+VGS D+PG GAKIL+G G L+R L
Sbjct: 485 RSILENLLMDSMYEIPDIRTGKDIIDAVVVDEESVGS-DSPGFGAKILYGKGALDRYLSG 543
Query: 490 TKSAHENDSE 499
K A DSE
Sbjct: 544 QK-ATSQDSE 552
>gi|12322385|gb|AAG51217.1|AC051630_14 CLP protease regulatory subunit CLPX, putative; 15869-19379
[Arabidopsis thaliana]
Length = 670
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 295/432 (68%), Positives = 342/432 (79%), Gaps = 27/432 (6%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D PTPKEICK LD+FVIGQ RAKK +L AVYNHYKRIYH+S++K
Sbjct: 248 DFPTPKEICKWLDKFVIGQSRAKK-----VL----------SVAVYNHYKRIYHTSMKKG 292
Query: 131 LVSDH--------LYVDSILGS-GVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAK 181
L+ D L+ IL + +S +++D+ VEL+KSNVLLMGPTGSGKTLLAK
Sbjct: 293 LLHDSDALSPFNPLWFTLILWTLNPRSAAQPIDDDDNVELDKSNVLLMGPTGSGKTLLAK 352
Query: 182 TLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV 241
TLAR+VNVPF I DAT LTQAGYVG+D ES+L+KLL A+F+V+AAQ+GIVYIDEVDKI
Sbjct: 353 TLARLVNVPFVIADATTLTQAGYVGDDVESILHKLLTVAEFNVQAAQQGIVYIDEVDKIT 412
Query: 242 K-AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICG 300
K AES N RDVSGEGVQQALLK+LEGT+VNVP G RKHPRGD+I IDTKDILFICG
Sbjct: 413 KKAESLNISRDVSGEGVQQALLKLLEGTIVNVP--GKGARKHPRGDHIQIDTKDILFICG 470
Query: 301 GAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPE 360
GAFV LEKTI +RRQDSSIGFGAPVRANM T G+T +TSSLLESV+S DL AYGLIPE
Sbjct: 471 GAFVDLEKTIVDRRQDSSIGFGAPVRANMATSGVTSGAITSSLLESVESADLTAYGLIPE 530
Query: 361 FIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAM 420
F+GRFPILVSLSAL EDQL++VL+EPKNALG+QYKK+FSMNNVKLHFT+ AL +I+K+AM
Sbjct: 531 FVGRFPILVSLSALTEDQLIRVLVEPKNALGKQYKKLFSMNNVKLHFTEKALEIISKQAM 590
Query: 421 AKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGD 480
KNTGARGLRALLE+ILTEAMFEIP+ K G ++AV+VD+E+ S + GC AKIL GD
Sbjct: 591 VKNTGARGLRALLESILTEAMFEIPDDKKGDERIDAVIVDEESTSSEASRGCTAKILRGD 650
Query: 481 GELERVLHETKS 492
G ER L E KS
Sbjct: 651 GAFERYLSENKS 662
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 28/33 (84%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKVK 33
+VNFCP CKTA+ F P ++PL+G+FIE+G+V+
Sbjct: 113 SVNFCPTCKTAYGFNPRGVSPLQGTFIEIGRVQ 145
>gi|225455378|ref|XP_002272792.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
isoform 1 [Vitis vinifera]
Length = 583
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 295/422 (69%), Positives = 332/422 (78%), Gaps = 30/422 (7%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+ PTPKEIC+GLD+FVIGQERAKK +L AVYNHYKRIYH SLQK
Sbjct: 162 NFPTPKEICRGLDKFVIGQERAKK-----VL----------SVAVYNHYKRIYHQSLQKW 206
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
D +++ VELEKSN+LLMGPTGSGKTLLAKTLAR VNVP
Sbjct: 207 PAED-----------TSDDKAEATDNDSVELEKSNILLMGPTGSGKTLLAKTLARFVNVP 255
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNG 249
F I DAT LTQAGYVGED ES+LYKLL AD++V AAQ+GIVYIDEVDKI K AES N
Sbjct: 256 FVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNLS 315
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLKMLEGTVVNVP + G RKHPRGDNI IDTKDILFICGGAF+ LEKT
Sbjct: 316 RDVSGEGVQQALLKMLEGTVVNVP--EKGARKHPRGDNIQIDTKDILFICGGAFIDLEKT 373
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
ISERRQDSSIGFGAPVRANMRTGG TDA V SSLLE+V+S DL++YGLIPEF+GRFPILV
Sbjct: 374 ISERRQDSSIGFGAPVRANMRTGGPTDAAVASSLLETVESSDLISYGLIPEFVGRFPILV 433
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SLSAL E+QLV+VL EPKNALG+QYKKMF MN VKLHFT +ALRLI++KAM+KNTGARGL
Sbjct: 434 SLSALTENQLVEVLTEPKNALGKQYKKMFQMNGVKLHFTKNALRLISRKAMSKNTGARGL 493
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHE 489
R++LENIL AM+EIP+ + G ++AV+VD EAVGS D G GAKIL+G G L+ L +
Sbjct: 494 RSILENILMNAMYEIPDVRTGNDIIDAVVVDDEAVGS-DGHGFGAKILYGKGALDCYLSQ 552
Query: 490 TK 491
K
Sbjct: 553 HK 554
>gi|297851760|ref|XP_002893761.1| hypothetical protein ARALYDRAFT_473508 [Arabidopsis lyrata subsp.
lyrata]
gi|297339603|gb|EFH70020.1| hypothetical protein ARALYDRAFT_473508 [Arabidopsis lyrata subsp.
lyrata]
Length = 660
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 293/431 (67%), Positives = 338/431 (78%), Gaps = 35/431 (8%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D PTPKEICK LD+FVIGQ RAKK +L AVYNHYKRIYH+S++K
Sbjct: 252 DFPTPKEICKWLDKFVIGQTRAKK-----VL----------SVAVYNHYKRIYHTSMKK- 295
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
GS + +++D+ VEL+KSNVLLMGPTGSGKTLLAKTLAR+VNVP
Sbjct: 296 ------------GSAAQP----IDDDDNVELDKSNVLLMGPTGSGKTLLAKTLARLVNVP 339
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNG 249
F I DAT LTQAGYVG+D ES+L+KLL A+F+V+AAQ+GIVYIDEVDKI K AES N
Sbjct: 340 FVIADATTLTQAGYVGDDVESILHKLLTVAEFNVQAAQQGIVYIDEVDKITKKAESLNIS 399
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+VNVP G RKHPRGD+I IDTKDILFICGGAFV LEKT
Sbjct: 400 RDVSGEGVQQALLKLLEGTIVNVP--GKGARKHPRGDHIQIDTKDILFICGGAFVDLEKT 457
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I +RRQDSSIGFGAPVRANM T G+T +TSSLLESV+S DL AYGLIPEF+GRFPILV
Sbjct: 458 IVDRRQDSSIGFGAPVRANMATSGVTSGAITSSLLESVESADLTAYGLIPEFVGRFPILV 517
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SLSAL EDQL++VL+EPKNALG+QYKK+FSMNNVKLHFT+ AL +I+K+AM KNTGARGL
Sbjct: 518 SLSALTEDQLIRVLVEPKNALGKQYKKLFSMNNVKLHFTEKALEIISKQAMVKNTGARGL 577
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHE 489
RALLE+ILTEAMFEIP+ K G ++AV+VD+E+ S + GC AKIL GDG ER L E
Sbjct: 578 RALLESILTEAMFEIPDDKKGDERIDAVIVDEESTSSEASRGCSAKILRGDGAFERYLSE 637
Query: 490 TKSAHENDSEV 500
KS +S V
Sbjct: 638 NKSKDATESMV 648
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 28/33 (84%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKVK 33
++NFCP CKTA+ F P ++PL+G+FIE+G+V+
Sbjct: 113 SMNFCPTCKTAYGFNPRGVSPLQGTFIEIGRVQ 145
>gi|302143904|emb|CBI23009.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 294/422 (69%), Positives = 331/422 (78%), Gaps = 30/422 (7%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+ PTPKEIC+GLD+FVIGQERAKK +L AVYNHYKRIYH SLQK
Sbjct: 162 NFPTPKEICRGLDKFVIGQERAKK-----VL----------SVAVYNHYKRIYHQSLQKW 206
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
D +++ VELEKSN+LLMGPTGSGKTLLAKTLAR VNVP
Sbjct: 207 PAED-----------TSDDKAEATDNDSVELEKSNILLMGPTGSGKTLLAKTLARFVNVP 255
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNG 249
F I DAT LTQA YVGED ES+LYKLL AD++V AAQ+GIVYIDEVDKI K AES N
Sbjct: 256 FVIADATTLTQARYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNLS 315
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLKMLEGTVVNVP + G RKHPRGDNI IDTKDILFICGGAF+ LEKT
Sbjct: 316 RDVSGEGVQQALLKMLEGTVVNVP--EKGARKHPRGDNIQIDTKDILFICGGAFIDLEKT 373
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
ISERRQDSSIGFGAPVRANMRTGG TDA V SSLLE+V+S DL++YGLIPEF+GRFPILV
Sbjct: 374 ISERRQDSSIGFGAPVRANMRTGGPTDAAVASSLLETVESSDLISYGLIPEFVGRFPILV 433
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SLSAL E+QLV+VL EPKNALG+QYKKMF MN VKLHFT +ALRLI++KAM+KNTGARGL
Sbjct: 434 SLSALTENQLVEVLTEPKNALGKQYKKMFQMNGVKLHFTKNALRLISRKAMSKNTGARGL 493
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHE 489
R++LENIL AM+EIP+ + G ++AV+VD EAVGS D G GAKIL+G G L+ L +
Sbjct: 494 RSILENILMNAMYEIPDVRTGNDIIDAVVVDDEAVGS-DGHGFGAKILYGKGALDCYLSQ 552
Query: 490 TK 491
K
Sbjct: 553 HK 554
>gi|297792705|ref|XP_002864237.1| hypothetical protein ARALYDRAFT_918413 [Arabidopsis lyrata subsp.
lyrata]
gi|297310072|gb|EFH40496.1| hypothetical protein ARALYDRAFT_918413 [Arabidopsis lyrata subsp.
lyrata]
Length = 572
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 292/423 (69%), Positives = 335/423 (79%), Gaps = 29/423 (6%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D PTPKEICKGL++FVIGQERAKK +L AVYNHYKRIYH S QK
Sbjct: 150 DFPTPKEICKGLNKFVIGQERAKK-----VL----------SVAVYNHYKRIYHESSQKR 194
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+ DS + VK + D++VELEKSN+LLMGPTGSGKTLLAKTLAR VNVP
Sbjct: 195 SAGE---TDS---TAVKPAD-----DDMVELEKSNILLMGPTGSGKTLLAKTLARFVNVP 243
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNG 249
F I DAT LTQAGYVGED ES+LYKLL AD++V AAQ+GIVYIDEVDKI K AES N
Sbjct: 244 FVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESLNIS 303
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLKMLEGT+VNVP + G RKHPRGDNI IDTKDILFICGGAFV +EKT
Sbjct: 304 RDVSGEGVQQALLKMLEGTIVNVP--EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKT 361
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
ISERR DSSIGFGAPVRANMR GG+T+A V S+L+E+V+S DL+AYGLIPEF+GRFP+LV
Sbjct: 362 ISERRHDSSIGFGAPVRANMRAGGVTNAAVASNLMETVESSDLIAYGLIPEFVGRFPVLV 421
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SLSAL E+QL+QVL EPKNALG+QYKKM+ MN+VKLHFT+ ALRLIA+KA+ KNTGARGL
Sbjct: 422 SLSALTENQLMQVLTEPKNALGKQYKKMYQMNSVKLHFTESALRLIARKAITKNTGARGL 481
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHE 489
R+LLE+IL ++M+EIP+ G+ + AV+VD+EAV G GAKIL G G L R L E
Sbjct: 482 RSLLESILMDSMYEIPDESTGSDMIEAVVVDEEAVEGEGRRGSGAKILRGKGALGRYLSE 541
Query: 490 TKS 492
TKS
Sbjct: 542 TKS 544
>gi|12322572|gb|AAG51286.1|AC027035_9 CLP protease regulatory subunit CLPX, putative [Arabidopsis
thaliana]
Length = 650
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 293/423 (69%), Positives = 338/423 (79%), Gaps = 29/423 (6%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D PTPKEICK LD+FVIGQ RAKK +L AVYNHYKRIYH+S++K
Sbjct: 248 DFPTPKEICKWLDKFVIGQSRAKK-----VL----------SVAVYNHYKRIYHTSMKKG 292
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
LV S++ S +++D+ VEL+KSNVLLMGPTGSGKTLLAKTLAR+VNVP
Sbjct: 293 LVL------SLIHSAQP-----IDDDDNVELDKSNVLLMGPTGSGKTLLAKTLARLVNVP 341
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNG 249
F I DAT LTQAGYVG+D ES+L+KLL A+F+V+AAQ+GIVYIDEVDKI K AES N
Sbjct: 342 FVIADATTLTQAGYVGDDVESILHKLLTVAEFNVQAAQQGIVYIDEVDKITKKAESLNIS 401
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+VNVP G RKHPRGD+I IDTKDILFICGGAFV LEKT
Sbjct: 402 RDVSGEGVQQALLKLLEGTIVNVP--GKGARKHPRGDHIQIDTKDILFICGGAFVDLEKT 459
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I +RRQDSSIGFGAPVRANM T G+T +TSSLLESV+S DL AYGLIPEF+GRFPILV
Sbjct: 460 IVDRRQDSSIGFGAPVRANMATSGVTSGAITSSLLESVESADLTAYGLIPEFVGRFPILV 519
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SLSAL EDQL++VL+EPKNALG+QYKK+FSMNNVKLHFT+ AL +I+K+AM KNTGARGL
Sbjct: 520 SLSALTEDQLIRVLVEPKNALGKQYKKLFSMNNVKLHFTEKALEIISKQAMVKNTGARGL 579
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHE 489
RALLE+ILTEAMFEIP+ K G ++AV+VD+E+ S + GC AKIL GDG ER L E
Sbjct: 580 RALLESILTEAMFEIPDDKKGDERIDAVIVDEESTSSEASRGCTAKILRGDGAFERYLSE 639
Query: 490 TKS 492
KS
Sbjct: 640 NKS 642
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 28/33 (84%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKVK 33
+VNFCP CKTA+ F P ++PL+G+FIE+G+V+
Sbjct: 113 SVNFCPTCKTAYGFNPRGVSPLQGTFIEIGRVQ 145
>gi|359490703|ref|XP_003634146.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
isoform 2 [Vitis vinifera]
Length = 577
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 293/422 (69%), Positives = 329/422 (77%), Gaps = 36/422 (8%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+ PTPKEIC+GLD+FVIGQERAKK AVYNHYKRIYH SLQK
Sbjct: 162 NFPTPKEICRGLDKFVIGQERAKKV---------------LSVAVYNHYKRIYHQSLQK- 205
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+++ VELEKSN+LLMGPTGSGKTLLAKTLAR VNVP
Sbjct: 206 ----------------CDDKAEATDNDSVELEKSNILLMGPTGSGKTLLAKTLARFVNVP 249
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNG 249
F I DAT LTQAGYVGED ES+LYKLL AD++V AAQ+GIVYIDEVDKI K AES N
Sbjct: 250 FVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNLS 309
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLKMLEGTVVNVP + G RKHPRGDNI IDTKDILFICGGAF+ LEKT
Sbjct: 310 RDVSGEGVQQALLKMLEGTVVNVP--EKGARKHPRGDNIQIDTKDILFICGGAFIDLEKT 367
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
ISERRQDSSIGFGAPVRANMRTGG TDA V SSLLE+V+S DL++YGLIPEF+GRFPILV
Sbjct: 368 ISERRQDSSIGFGAPVRANMRTGGPTDAAVASSLLETVESSDLISYGLIPEFVGRFPILV 427
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SLSAL E+QLV+VL EPKNALG+QYKKMF MN VKLHFT +ALRLI++KAM+KNTGARGL
Sbjct: 428 SLSALTENQLVEVLTEPKNALGKQYKKMFQMNGVKLHFTKNALRLISRKAMSKNTGARGL 487
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHE 489
R++LENIL AM+EIP+ + G ++AV+VD EAVGS D G GAKIL+G G L+ L +
Sbjct: 488 RSILENILMNAMYEIPDVRTGNDIIDAVVVDDEAVGS-DGHGFGAKILYGKGALDCYLSQ 546
Query: 490 TK 491
K
Sbjct: 547 HK 548
>gi|18423503|ref|NP_568792.1| CLP protease regulatory subunit X [Arabidopsis thaliana]
gi|9759182|dbj|BAB09797.1| ATP-dependent Clp protease regulatory subunit CLPX [Arabidopsis
thaliana]
gi|14334860|gb|AAK59608.1| putative ATP-dependent Clp protease ATP-binding subunit ClpX1
[Arabidopsis thaliana]
gi|23296603|gb|AAN13130.1| putative ATP-dependent Clp protease ATP-binding subunit ClpX1
[Arabidopsis thaliana]
gi|332008960|gb|AED96343.1| CLP protease regulatory subunit X [Arabidopsis thaliana]
Length = 579
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 289/423 (68%), Positives = 330/423 (78%), Gaps = 29/423 (6%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D PTPKEICKGL++FVIGQERAKK +L AVYNHYKRIYH S QK
Sbjct: 157 DFPTPKEICKGLNKFVIGQERAKK-----VL----------SVAVYNHYKRIYHESSQKR 201
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+ S +D++VELEKSN+LLMGPTGSGKTLLAKTLAR VNVP
Sbjct: 202 SAGE-----------TDSTAAKPADDDMVELEKSNILLMGPTGSGKTLLAKTLARFVNVP 250
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNG 249
F I DAT LTQAGYVGED ES+LYKLL AD++V AAQ+GIVYIDEVDKI K AES N
Sbjct: 251 FVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESLNIS 310
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLKMLEGT+VNVP + G RKHPRGDNI IDTKDILFICGGAFV +EKT
Sbjct: 311 RDVSGEGVQQALLKMLEGTIVNVP--EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKT 368
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
ISERR DSSIGFGAPVRANMR GG+T+A V S+L+E+V+S DL+AYGLIPEF+GRFP+LV
Sbjct: 369 ISERRHDSSIGFGAPVRANMRAGGVTNAAVASNLMETVESSDLIAYGLIPEFVGRFPVLV 428
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SLSAL E+QL+QVL EPKNALG+QYKKM+ MN+VKLHFT+ ALRLIA+KA+ KNTGARGL
Sbjct: 429 SLSALTENQLMQVLTEPKNALGKQYKKMYQMNSVKLHFTESALRLIARKAITKNTGARGL 488
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHE 489
RALLE+IL ++M+EIP+ G+ + AV+VD+EAV G GAKIL G G L R L E
Sbjct: 489 RALLESILMDSMYEIPDEGTGSDMIEAVVVDEEAVEGEGRRGSGAKILRGKGALARYLSE 548
Query: 490 TKS 492
T S
Sbjct: 549 TNS 551
>gi|42562485|ref|NP_564423.3| ATP-dependent Clp protease [Arabidopsis thaliana]
gi|51536496|gb|AAU05486.1| At1g33360 [Arabidopsis thaliana]
gi|53850505|gb|AAU95429.1| At1g33360 [Arabidopsis thaliana]
gi|332193466|gb|AEE31587.1| ATP-dependent Clp protease [Arabidopsis thaliana]
Length = 656
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 291/423 (68%), Positives = 335/423 (79%), Gaps = 35/423 (8%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D PTPKEICK LD+FVIGQ RAKK +L AVYNHYKRIYH+S++K
Sbjct: 248 DFPTPKEICKWLDKFVIGQSRAKK-----VL----------SVAVYNHYKRIYHTSMKK- 291
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
GS + +++D+ VEL+KSNVLLMGPTGSGKTLLAKTLAR+VNVP
Sbjct: 292 ------------GSAAQP----IDDDDNVELDKSNVLLMGPTGSGKTLLAKTLARLVNVP 335
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNG 249
F I DAT LTQAGYVG+D ES+L+KLL A+F+V+AAQ+GIVYIDEVDKI K AES N
Sbjct: 336 FVIADATTLTQAGYVGDDVESILHKLLTVAEFNVQAAQQGIVYIDEVDKITKKAESLNIS 395
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+VNVP G RKHPRGD+I IDTKDILFICGGAFV LEKT
Sbjct: 396 RDVSGEGVQQALLKLLEGTIVNVP--GKGARKHPRGDHIQIDTKDILFICGGAFVDLEKT 453
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I +RRQDSSIGFGAPVRANM T G+T +TSSLLESV+S DL AYGLIPEF+GRFPILV
Sbjct: 454 IVDRRQDSSIGFGAPVRANMATSGVTSGAITSSLLESVESADLTAYGLIPEFVGRFPILV 513
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SLSAL EDQL++VL+EPKNALG+QYKK+FSMNNVKLHFT+ AL +I+K+AM KNTGARGL
Sbjct: 514 SLSALTEDQLIRVLVEPKNALGKQYKKLFSMNNVKLHFTEKALEIISKQAMVKNTGARGL 573
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHE 489
RALLE+ILTEAMFEIP+ K G ++AV+VD+E+ S + GC AKIL GDG ER L E
Sbjct: 574 RALLESILTEAMFEIPDDKKGDERIDAVIVDEESTSSEASRGCTAKILRGDGAFERYLSE 633
Query: 490 TKS 492
KS
Sbjct: 634 NKS 636
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 28/33 (84%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKVK 33
+VNFCP CKTA+ F P ++PL+G+FIE+G+V+
Sbjct: 113 SVNFCPTCKTAYGFNPRGVSPLQGTFIEIGRVQ 145
>gi|115441503|ref|NP_001045031.1| Os01g0886600 [Oryza sativa Japonica Group]
gi|56784314|dbj|BAD82240.1| putative CLP protease regulatory subunit CLPX [Oryza sativa
Japonica Group]
gi|56785236|dbj|BAD82124.1| putative CLP protease regulatory subunit CLPX [Oryza sativa
Japonica Group]
gi|113534562|dbj|BAF06945.1| Os01g0886600 [Oryza sativa Japonica Group]
Length = 496
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 284/423 (67%), Positives = 338/423 (79%), Gaps = 33/423 (7%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTP+E+C+ LDEFVIGQ +AKK AVYNHYKRIY++++QK
Sbjct: 76 ELPTPREMCRRLDEFVIGQGKAKKV---------------LSVAVYNHYKRIYNATVQK- 119
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEI--VELEKSNVLLMGPTGSGKTLLAKTLARIVN 188
G SG + +D+ +E++KSNVLLMGPTGSGKTLLAKTLARIVN
Sbjct: 120 ------------GCSTNSGWLDAASDDQNNIEIDKSNVLLMGPTGSGKTLLAKTLARIVN 167
Query: 189 VPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRN 247
VPF I DAT+LTQAGYVGED ES+L KLL AA+++V+AAQ+GIVYIDEVDKI K AES N
Sbjct: 168 VPFIIADATSLTQAGYVGEDVESILQKLLVAAEYNVQAAQQGIVYIDEVDKITKKAESAN 227
Query: 248 NGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLE 307
RDVSGEGVQQALLK+LEGTVV+ IP+ G RK+ R ++I IDTKDILFICGGAFV LE
Sbjct: 228 VSRDVSGEGVQQALLKILEGTVVS--IPEKGSRKNSRNESIQIDTKDILFICGGAFVDLE 285
Query: 308 KTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPI 367
KTISERRQDSSIGFGAP+R NMR+ +TD +VTSSLLESV+SGDL YGLIPEFIGR PI
Sbjct: 286 KTISERRQDSSIGFGAPIRINMRSSEVTDPMVTSSLLESVESGDLARYGLIPEFIGRLPI 345
Query: 368 LVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGAR 427
LVSL+ALNEDQLVQVL EPKN+L RQY+KMFS+N VKLHFTD ALR++AKKA+A+NTGAR
Sbjct: 346 LVSLTALNEDQLVQVLTEPKNSLSRQYRKMFSLNKVKLHFTDGALRIVAKKAIARNTGAR 405
Query: 428 GLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVL 487
GLRA+LE++L EAM+EIP+ K G+ V+AV+VD+EA+GS+D PGCGAKIL GDG LE+ +
Sbjct: 406 GLRAILESLLLEAMYEIPDEKTGSERVDAVVVDEEAIGSIDRPGCGAKILRGDGALEQYI 465
Query: 488 HET 490
T
Sbjct: 466 TNT 468
>gi|2674203|gb|AAB88706.1| CLP protease regulatory subunit CLPX [Arabidopsis thaliana]
Length = 579
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 287/423 (67%), Positives = 328/423 (77%), Gaps = 29/423 (6%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D PTPKEICKGL++FVIGQERAKK +L AVYNHYKRIYH S QK
Sbjct: 157 DFPTPKEICKGLNKFVIGQERAKK-----VL----------SVAVYNHYKRIYHESSQKR 201
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+ S +D++VELEKSN+LLMGPTGSGKTLLAKTLAR VNVP
Sbjct: 202 SAGE-----------TDSTAAKPADDDMVELEKSNILLMGPTGSGKTLLAKTLARFVNVP 250
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNG 249
F I DAT LTQAGYVGED ES+LYKLL AD++V AAQ+GIVYIDEVDKI K AES
Sbjct: 251 FVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESLYIS 310
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLKMLEGT+VNVP + G RKHPRGDNI IDTKDILFICGGAFV +EKT
Sbjct: 311 RDVSGEGVQQALLKMLEGTIVNVP--EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKT 368
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
ISERR DSSIGFGAPVRANMR GG+T A V S+L+E+V++ DL+AYGLIPEF+GRFP+LV
Sbjct: 369 ISERRHDSSIGFGAPVRANMRAGGVTTAAVASNLMETVETSDLIAYGLIPEFVGRFPVLV 428
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SLSAL E+QL+QVL EPKNALG+QYKKM+ MN+VKLHFT+ ALRLIA+KA+ KNTGARGL
Sbjct: 429 SLSALTENQLMQVLTEPKNALGKQYKKMYQMNSVKLHFTESALRLIARKAITKNTGARGL 488
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHE 489
RALLE+IL ++M+EIP+ G+ + AV+VD+EAV G GAKIL G G L R L E
Sbjct: 489 RALLESILMDSMYEIPDEGTGSDMIEAVVVDEEAVEGEGRRGSGAKILRGKGALARYLSE 548
Query: 490 TKS 492
T S
Sbjct: 549 TNS 551
>gi|449515470|ref|XP_004164772.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent Clp protease
ATP-binding subunit ClpX-like [Cucumis sativus]
Length = 571
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 292/430 (67%), Positives = 341/430 (79%), Gaps = 32/430 (7%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+ PTPKEI KGLD+FVIGQERAKK V +G VYNHYKRIYH SLQ+
Sbjct: 154 NFPTPKEIAKGLDKFVIGQERAKK-----------VLSVG----VYNHYKRIYHESLQRP 198
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
D + + +D+ VELEKSN+LLMGPTGSGKTLLAKTLAR VNVP
Sbjct: 199 -TGDTF-----------NNKADAADDDKVELEKSNILLMGPTGSGKTLLAKTLARFVNVP 246
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNG 249
F I DAT LTQAGYVGED ES+LYKLL AD++V AAQ+GIVYIDEVDKI K AES N
Sbjct: 247 FVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNIS 306
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLKMLEGT+VNVP + G RKHPRG+NI IDTKDILFICG + L KT
Sbjct: 307 RDVSGEGVQQALLKMLEGTIVNVP--EKGARKHPRGENIQIDTKDILFICGVPSLXLGKT 364
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
ISERRQDSS+GFGAPVRANMR GG+TDA+VTSSLLE+V+S DL+AYGLIPEF+GRFPILV
Sbjct: 365 ISERRQDSSLGFGAPVRANMRAGGVTDAMVTSSLLETVESSDLIAYGLIPEFVGRFPILV 424
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SLSAL E+QLVQVL EPKNALG+QY+KMF MN+VKLHFT+++LRLIA+KAM+KNTGARGL
Sbjct: 425 SLSALTENQLVQVLTEPKNALGKQYRKMFQMNDVKLHFTENSLRLIARKAMSKNTGARGL 484
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHE 489
R++LEN+L ++M+EIP+ + G ++AV+VD+E+VGS D+PG GAKIL+G G L+R L
Sbjct: 485 RSILENLLMDSMYEIPDVRTGKDIIDAVIVDEESVGS-DSPGFGAKILYGKGALDRHLSG 543
Query: 490 TKSAHENDSE 499
K A DSE
Sbjct: 544 QK-ATSQDSE 552
>gi|218189491|gb|EEC71918.1| hypothetical protein OsI_04712 [Oryza sativa Indica Group]
Length = 630
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 287/429 (66%), Positives = 342/429 (79%), Gaps = 36/429 (8%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGAC------CAVYNHYKRIYH 124
+LPTP+E+C+ LDEFVIGQ +AKK + GAC AVYNHYKRIY+
Sbjct: 201 ELPTPREMCRRLDEFVIGQGKAKK------------VLEGACHNWVLSVAVYNHYKRIYN 248
Query: 125 SSLQKELVSDHLYVDSILGSGVKSGNCNVENDEI--VELEKSNVLLMGPTGSGKTLLAKT 182
+++QK G SG + +D+ +E++KSNVLLMGPTGSGKTLLAKT
Sbjct: 249 ATVQK-------------GCSTNSGWLDAASDDQNNIEIDKSNVLLMGPTGSGKTLLAKT 295
Query: 183 LARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK 242
LARIVNVPF I DAT+LTQAGYVGED ES+L KLL AA+++V+AAQ+GIVYIDEVDKI K
Sbjct: 296 LARIVNVPFIIADATSLTQAGYVGEDVESILQKLLVAAEYNVQAAQQGIVYIDEVDKITK 355
Query: 243 -AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGG 301
AES N RDVSGEGVQQALLK+LEGTVV+ IP+ G RK+ R ++I IDTKDILFICGG
Sbjct: 356 KAESVNVSRDVSGEGVQQALLKILEGTVVS--IPEKGSRKNSRNESIQIDTKDILFICGG 413
Query: 302 AFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEF 361
AFV LEKTISERRQDSSIGFGAP+R NMR+ +TD +VTSSLLESV+SGDL YGLIPEF
Sbjct: 414 AFVDLEKTISERRQDSSIGFGAPIRTNMRSSEVTDPMVTSSLLESVESGDLARYGLIPEF 473
Query: 362 IGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMA 421
IGR PILVSL+ALNEDQLVQVL EPKN+L RQY+KMFS+N VKLHFTD ALR++AKKA+A
Sbjct: 474 IGRLPILVSLTALNEDQLVQVLTEPKNSLSRQYRKMFSLNKVKLHFTDGALRIVAKKAIA 533
Query: 422 KNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDG 481
+NTGARGLRA+LE++L EAM+EIP+ K G+ V+AV+VD+EA+GS+D PGCGAKIL GDG
Sbjct: 534 RNTGARGLRAILESLLLEAMYEIPDEKTGSERVDAVVVDEEAIGSIDRPGCGAKILRGDG 593
Query: 482 ELERVLHET 490
LE+ + T
Sbjct: 594 ALEQYITNT 602
>gi|357126242|ref|XP_003564797.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Brachypodium distachyon]
Length = 617
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 288/425 (67%), Positives = 338/425 (79%), Gaps = 33/425 (7%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTP+E+C+ LDEFVIGQ +AKK +L AVYNHYKRIY++++QK
Sbjct: 199 ELPTPREMCRRLDEFVIGQGKAKK-----VL----------SVAVYNHYKRIYNANVQK- 242
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDE--IVELEKSNVLLMGPTGSGKTLLAKTLARIVN 188
GS SG ND+ VE++KSNVLLMGPTGSGKTLLAKTLARIVN
Sbjct: 243 ------------GSAANSGCPEAANDDQNTVEIDKSNVLLMGPTGSGKTLLAKTLARIVN 290
Query: 189 VPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRN 247
VPF I DAT+LTQAGYVGED ES+L KLL A+++V+AAQ+GIVYIDEVDKI K AES N
Sbjct: 291 VPFIIADATSLTQAGYVGEDVESILQKLLVEAEYNVQAAQQGIVYIDEVDKITKKAESAN 350
Query: 248 NGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLE 307
RDVSGEGVQQALLK+LEGTVV IP+ G RK+ R D+I IDTKDILFICGGAFV L+
Sbjct: 351 VSRDVSGEGVQQALLKILEGTVVT--IPEKGSRKNSRNDSIQIDTKDILFICGGAFVDLD 408
Query: 308 KTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPI 367
KTISERRQDSSIGFGAP+R MR+ G+T+ VTSSLLESV+SGDL YGLIPEFIGR PI
Sbjct: 409 KTISERRQDSSIGFGAPIRTKMRSSGVTNPTVTSSLLESVESGDLAKYGLIPEFIGRLPI 468
Query: 368 LVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGAR 427
LVSL+AL+EDQLVQVL EPKN+L RQY+KMFS+NNVKLHFTDDALR++AKKA+A+NTGAR
Sbjct: 469 LVSLAALHEDQLVQVLTEPKNSLSRQYRKMFSLNNVKLHFTDDALRIVAKKAIARNTGAR 528
Query: 428 GLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVL 487
GLRA+LE+IL EAM+EIP+ K G V+AV+VD+EA+GSVD PGCGAKIL GDG L + +
Sbjct: 529 GLRAILESILLEAMYEIPDEKAGNERVDAVVVDEEAIGSVDRPGCGAKILRGDGALAQYI 588
Query: 488 HETKS 492
T +
Sbjct: 589 TRTSA 593
>gi|413951702|gb|AFW84351.1| hypothetical protein ZEAMMB73_159465 [Zea mays]
Length = 624
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 281/421 (66%), Positives = 335/421 (79%), Gaps = 29/421 (6%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLPTP+E+C+ LDEFVIGQ +AKK AVYNHYKRIY++++QKE
Sbjct: 204 DLPTPRELCRRLDEFVIGQAKAKKV---------------LSVAVYNHYKRIYNANVQKE 248
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+ + D+ ++ IVE++KSNVLLMGPTGSGKTLLAKTLARIVNVP
Sbjct: 249 FAGNSGFPDA-----------GHDDQNIVEIDKSNVLLMGPTGSGKTLLAKTLARIVNVP 297
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNG 249
F I DAT+LTQAGYVGED ES+L KLL AA+++V+AAQ+GIVYIDE+DKI K AES N
Sbjct: 298 FVIADATSLTQAGYVGEDVESILQKLLVAAEYNVQAAQQGIVYIDEIDKITKKAESANVS 357
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTVV+ IP+ G RK+ R D+I IDT DILFICGGAFV LEKT
Sbjct: 358 RDVSGEGVQQALLKILEGTVVS--IPEKGSRKNSRNDSIQIDTTDILFICGGAFVDLEKT 415
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
ISERRQDSSIGFGAP+R NMR+ G + +VTSSLLESV+SGDLV YGLIPEFIGR PILV
Sbjct: 416 ISERRQDSSIGFGAPIRTNMRSSGASCPMVTSSLLESVESGDLVRYGLIPEFIGRLPILV 475
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SL+ALNE QLVQVL EPKN+L +QY+KMF++N VKLHFTD ALRL+AKKA+AK+TGARGL
Sbjct: 476 SLAALNEGQLVQVLTEPKNSLSKQYRKMFNLNKVKLHFTDGALRLLAKKAIAKSTGARGL 535
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHE 489
RA+LE +L EAM+E+P+ K G V+AV+VD+EA+GSVD PGCGAKIL GDG L++ +
Sbjct: 536 RAILETVLLEAMYEVPDEKTGNERVDAVVVDEEAIGSVDRPGCGAKILRGDGALDQYITR 595
Query: 490 T 490
T
Sbjct: 596 T 596
>gi|224132768|ref|XP_002321405.1| predicted protein [Populus trichocarpa]
gi|222868401|gb|EEF05532.1| predicted protein [Populus trichocarpa]
Length = 403
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 282/423 (66%), Positives = 327/423 (77%), Gaps = 34/423 (8%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
PTPKEICK LD FVIGQ RAKK AVYNHYKRIY S++K
Sbjct: 10 FPTPKEICKALDNFVIGQRRAKKV---------------LSVAVYNHYKRIYLESVKK-- 52
Query: 132 VSDHLYVDSILGSGVKSGN--CNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNV 189
S SGN ++ +D+ VELEKSN+LLMGPTGSGKTLLAKTLAR VNV
Sbjct: 53 -----------WSNTDSGNEKSDIMDDDGVELEKSNILLMGPTGSGKTLLAKTLARFVNV 101
Query: 190 PFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNN 248
PF I DAT LTQA YVGED ES+LYKLL AAD++V AAQ+GI+YIDE+DKI K AES N
Sbjct: 102 PFVIADATTLTQARYVGEDVESILYKLLTAADYNVAAAQQGIIYIDEIDKITKKAESVNI 161
Query: 249 GRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEK 308
RDVSGEGVQQALLKMLEGT+VNVP + G RKHPRGDNI IDTKDILFICGGAF+ LEK
Sbjct: 162 SRDVSGEGVQQALLKMLEGTIVNVP--EKGARKHPRGDNIQIDTKDILFICGGAFIDLEK 219
Query: 309 TISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
TISERRQDSSIGFGAPVRANMRTGG+T VTSSLLE+ +S DLV+YGLIPEF+GRFPIL
Sbjct: 220 TISERRQDSSIGFGAPVRANMRTGGVTSTAVTSSLLETAESSDLVSYGLIPEFVGRFPIL 279
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
VSL+AL EDQLVQVL EPKNALG+QYKK+F MN+VKLH T++ALR IA+KA+ KNTGAR
Sbjct: 280 VSLAALTEDQLVQVLTEPKNALGKQYKKLFQMNDVKLHVTENALRSIARKAITKNTGARA 339
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLH 488
LR++LENIL ++M+EIP+ + G ++AV+VD+ A+GS + GAKIL+G G L+ L
Sbjct: 340 LRSILENILMDSMYEIPDVRTGDDIIDAVVVDEVAIGS-EERSVGAKILYGRGALDHYLS 398
Query: 489 ETK 491
+ K
Sbjct: 399 KEK 401
>gi|326489807|dbj|BAJ93977.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 619
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 284/420 (67%), Positives = 333/420 (79%), Gaps = 33/420 (7%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTP+E+C+ LDEFVIGQ +AKK + + AVYNHYKR+Y++++QK
Sbjct: 199 ELPTPREMCRRLDEFVIGQGKAKK--VLSV-------------AVYNHYKRVYNATVQK- 242
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEI--VELEKSNVLLMGPTGSGKTLLAKTLARIVN 188
GS SG + ND+ VE++KSNVLLMGPTGSGKTLLAKTLARIVN
Sbjct: 243 ------------GSADNSGCPDAANDDHDNVEIDKSNVLLMGPTGSGKTLLAKTLARIVN 290
Query: 189 VPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRN 247
VPF I DAT+LTQAGYVGED ES+L KLL A+++V+AAQ+GIVYIDEVDKI K AES N
Sbjct: 291 VPFVIADATSLTQAGYVGEDVESILQKLLVEAEYNVQAAQQGIVYIDEVDKITKKAESAN 350
Query: 248 NGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLE 307
RDVSGEGVQQALLK+LEGTVV IP+ G RK+ R D+I IDTKDILFICGGAFV LE
Sbjct: 351 VSRDVSGEGVQQALLKILEGTVVT--IPEKGSRKNSRNDSIQIDTKDILFICGGAFVDLE 408
Query: 308 KTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPI 367
KTISERRQDSSIGFGAP+R N+R+ G+T VTSSLLESV+SGDL +GLIPEFIGR PI
Sbjct: 409 KTISERRQDSSIGFGAPIRTNIRSSGVTSPTVTSSLLESVESGDLAKFGLIPEFIGRLPI 468
Query: 368 LVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGAR 427
LVSL+ALNEDQLVQVL EPKN+L RQY+KMFS+NNVKLHFTD ALR++AKKA+ KNTGAR
Sbjct: 469 LVSLAALNEDQLVQVLTEPKNSLSRQYRKMFSLNNVKLHFTDGALRIVAKKAIVKNTGAR 528
Query: 428 GLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVL 487
GLR +LE IL EAM+EIP+ K G V+AV+VD+EA+GSVD PGCGAKIL GDG L + +
Sbjct: 529 GLRVILETILLEAMYEIPDEKAGNERVDAVVVDEEAIGSVDRPGCGAKILRGDGALAQYI 588
>gi|242059473|ref|XP_002458882.1| hypothetical protein SORBIDRAFT_03g042120 [Sorghum bicolor]
gi|241930857|gb|EES04002.1| hypothetical protein SORBIDRAFT_03g042120 [Sorghum bicolor]
Length = 623
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 283/421 (67%), Positives = 338/421 (80%), Gaps = 29/421 (6%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTP+E+C+ LDEFVIGQ +AKK + + AVYNHYKRIY++++QKE
Sbjct: 203 ELPTPREMCRRLDEFVIGQAKAKK--VLSV-------------AVYNHYKRIYNANVQKE 247
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
S SG+ + +N IVE++KSNVLLMGPTGSGKTLLAKTLARIVNVP
Sbjct: 248 ---------SAANSGLPDAGHDDQN--IVEIDKSNVLLMGPTGSGKTLLAKTLARIVNVP 296
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNG 249
F I DAT+LTQAGYVGED ES+L KLL AA+++V+AAQ+GIVYIDE+DKI K AES N
Sbjct: 297 FVIADATSLTQAGYVGEDVESILQKLLVAAEYNVQAAQQGIVYIDEIDKITKKAESANVS 356
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTVV+ IP+ G RK+ R D+I IDT DILFICGGAFV LEKT
Sbjct: 357 RDVSGEGVQQALLKILEGTVVS--IPEKGSRKNSRNDSIQIDTTDILFICGGAFVDLEKT 414
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
ISERRQDSSIGFGAPVR NMR+ G + +VTS+LLESV+SGDLV YGLIPEFIGR PILV
Sbjct: 415 ISERRQDSSIGFGAPVRTNMRSSGASCPMVTSTLLESVESGDLVRYGLIPEFIGRLPILV 474
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SL+ALNE QLVQVL EPKN+L +QY+KMF++N V+LHFTD ALRL+AKKA+AK+TGARGL
Sbjct: 475 SLAALNEGQLVQVLTEPKNSLSKQYRKMFNLNKVRLHFTDGALRLVAKKAIAKSTGARGL 534
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHE 489
RA+LE +L EAM+EIP+ K G V+AV+VD+EA+GSVD PGCGAKIL GDG L++ +
Sbjct: 535 RAILETVLLEAMYEIPDEKTGNERVDAVVVDEEAIGSVDRPGCGAKILRGDGALDQYITR 594
Query: 490 T 490
T
Sbjct: 595 T 595
>gi|222619642|gb|EEE55774.1| hypothetical protein OsJ_04339 [Oryza sativa Japonica Group]
Length = 572
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 282/422 (66%), Positives = 335/422 (79%), Gaps = 36/422 (8%)
Query: 78 ICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGAC------CAVYNHYKRIYHSSLQKEL 131
+C+ LDEFVIGQ +AKK + GAC AVYNHYKRIY++++QK
Sbjct: 1 MCRRLDEFVIGQGKAKK------------VLEGACQNWVLSVAVYNHYKRIYNATVQK-- 46
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEI--VELEKSNVLLMGPTGSGKTLLAKTLARIVNV 189
G SG + +D+ +E++KSNVLLMGPTGSGKTLLAKTLARIVNV
Sbjct: 47 -----------GCSTNSGWLDAASDDQNNIEIDKSNVLLMGPTGSGKTLLAKTLARIVNV 95
Query: 190 PFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNN 248
PF I DAT+LTQAGYVGED ES+L KLL AA+++V+AAQ+GIVYIDEVDKI K AES N
Sbjct: 96 PFIIADATSLTQAGYVGEDVESILQKLLVAAEYNVQAAQQGIVYIDEVDKITKKAESANV 155
Query: 249 GRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEK 308
RDVSGEGVQQALLK+LEGTVV+ IP+ G RK+ R ++I IDTKDILFICGGAFV LEK
Sbjct: 156 SRDVSGEGVQQALLKILEGTVVS--IPEKGSRKNSRNESIQIDTKDILFICGGAFVDLEK 213
Query: 309 TISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
TISERRQDSSIGFGAP+R NMR+ +TD +VTSSLLESV+SGDL YGLIPEFIGR PIL
Sbjct: 214 TISERRQDSSIGFGAPIRINMRSSEVTDPMVTSSLLESVESGDLARYGLIPEFIGRLPIL 273
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
VSL+ALNEDQLVQVL EPKN+L RQY+KMFS+N VKLHFTD ALR++AKKA+A+NTGARG
Sbjct: 274 VSLTALNEDQLVQVLTEPKNSLSRQYRKMFSLNKVKLHFTDGALRIVAKKAIARNTGARG 333
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLH 488
LRA+LE++L EAM+EIP+ K G+ V+AV+VD+EA+GS+D PGCGAKIL GDG LE+ +
Sbjct: 334 LRAILESLLLEAMYEIPDEKTGSERVDAVVVDEEAIGSIDRPGCGAKILRGDGALEQYIT 393
Query: 489 ET 490
T
Sbjct: 394 NT 395
>gi|356516065|ref|XP_003526717.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Glycine max]
Length = 524
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 301/472 (63%), Positives = 356/472 (75%), Gaps = 42/472 (8%)
Query: 39 GGFIRKDGESN-------GIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQER 91
GG + + G SN G + +++ G ++ GN PTPKEICKGLD+FVIGQER
Sbjct: 66 GGIVVRPGNSNFEVAGGGGAPNSGDSKEGCWGGSNLGN-SFPTPKEICKGLDKFVIGQER 124
Query: 92 AKKSHIFCILVDMLVYVIGACCAVYNHYKRIYH-SSLQKELVSDHLYVDSILGSGVKSGN 150
AKK +L AVYNHYKRI++ +SL K D S
Sbjct: 125 AKK-----VL----------SVAVYNHYKRIFNETSLPKWPAGDS----------DNSVK 159
Query: 151 CNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAE 210
+ +D+ VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPF I DAT+LTQAGYVGED E
Sbjct: 160 VDAADDDRVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATSLTQAGYVGEDVE 219
Query: 211 SVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNGRDVSGEGVQQALLKMLEGTV 269
S+LYKLL AD++V AAQ+GIVYIDEVDKI K AES N RDVSGEGVQQALLKMLEGTV
Sbjct: 220 SILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 279
Query: 270 VNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANM 329
VNVP + G RKHPRGDNI IDTK+ILFICGGAFV LEKTISERR DSSIGFGAP+RANM
Sbjct: 280 VNVP--EKGARKHPRGDNIQIDTKNILFICGGAFVDLEKTISERRHDSSIGFGAPIRANM 337
Query: 330 RTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNA 389
RTG +T+A V SSLLE+V+S DL+AYGLIPEF+GRFPILVSLSAL E+QL+QVL EPKNA
Sbjct: 338 RTGKVTEAAVASSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLIQVLSEPKNA 397
Query: 390 LGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKI 449
LG+QYKKMF MN VKLHFT++ALR IA+KA++KNTGARGLR++LEN+L +AM+EIP+ +
Sbjct: 398 LGKQYKKMFQMNGVKLHFTENALRSIARKAISKNTGARGLRSILENVLVDAMYEIPDIRT 457
Query: 450 GTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHETKSAHENDSEVL 501
++AV+VD+EAVG + G GAKIL+G G L++ L E K NDSE +
Sbjct: 458 DDDVIDAVVVDEEAVGG-EGRGRGAKILYGKGALDQYLSEQK----NDSETM 504
>gi|168043143|ref|XP_001774045.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674591|gb|EDQ61097.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 283/423 (66%), Positives = 331/423 (78%), Gaps = 41/423 (9%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLPTP+EIC+ LD+FV+GQERAKK IL AVYNHYKRIYH S+QK
Sbjct: 9 DLPTPREICQALDKFVVGQERAKK-----IL----------SVAVYNHYKRIYHESVQK- 52
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
GS E D++VELEKSNVLLMGPTGSGKTLLAKTLAR VNVP
Sbjct: 53 ------------GS---------EEDDVVELEKSNVLLMGPTGSGKTLLAKTLARFVNVP 91
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNG 249
F I DAT LTQAGYVGED ES+LYKLL ++F+V AAQ+GIVYIDEVDKI K AES +
Sbjct: 92 FIIADATTLTQAGYVGEDVESILYKLLMVSEFNVPAAQQGIVYIDEVDKITKKAESVSIS 151
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLKMLEGT+VNVP + G RKHPRGD+I IDTKDILFICGGAF+ L KT
Sbjct: 152 RDVSGEGVQQALLKMLEGTIVNVP--EKGARKHPRGDHIQIDTKDILFICGGAFIELAKT 209
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
++ER+QDSSIGFG+PVRA+MR LTD+ +TSSLLE V+S DL++YGLIPEFIGRFP+LV
Sbjct: 210 VAERKQDSSIGFGSPVRASMRGNKLTDSAITSSLLEMVESSDLISYGLIPEFIGRFPVLV 269
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SLSALNEDQLVQVL EP+NALG+QYKKMFSMNNVKLH+TD ALR IA+KA+ KNTGARGL
Sbjct: 270 SLSALNEDQLVQVLTEPRNALGKQYKKMFSMNNVKLHYTDGALRRIAQKAIVKNTGARGL 329
Query: 430 RALLENILTEAMFEIPETKIGTSS-VNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLH 488
R+++E +LTEAM+++P+T + V+AV++D+EAVG+ D G AKIL G G L+ L
Sbjct: 330 RSIMETLLTEAMYQVPDTILNRDEHVDAVVLDEEAVGAPDGNGERAKILRGKGALDFFLG 389
Query: 489 ETK 491
K
Sbjct: 390 NQK 392
>gi|356509253|ref|XP_003523365.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Glycine max]
Length = 524
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 302/476 (63%), Positives = 355/476 (74%), Gaps = 49/476 (10%)
Query: 39 GGFIRKDGESN-------GIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQER 91
GG + + G SN + +++ G ++ GN PTPKEICKGLD+FVIGQER
Sbjct: 65 GGIVVRPGNSNFDVAGGGAAPNSGDSKEGCWGGSNLGN-SFPTPKEICKGLDKFVIGQER 123
Query: 92 AKKSHIFCILVDMLVYVIGACCAVYNHYKRIYH-SSLQKELVSDHLYVDSILGSGVKSGN 150
AKK +L AVYNHYKRI++ +S K D S N
Sbjct: 124 AKK-----VL----------SVAVYNHYKRIFNETSSSKWPAGD-------------SDN 155
Query: 151 CNVENDEI----VELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVG 206
NV+ D + VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPF I DAT+LTQAGYVG
Sbjct: 156 NNVKTDAVDDDRVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATSLTQAGYVG 215
Query: 207 EDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNGRDVSGEGVQQALLKML 265
ED ES+LYKLL AD++V AAQ+GIVYIDEVDKI K AES N RDVSGEGVQQALLKML
Sbjct: 216 EDVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 275
Query: 266 EGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPV 325
EGTVVNVP + G RKHPRGDNI IDTK+ILFICGGAFV LEKTISE R DSSIGFGAP+
Sbjct: 276 EGTVVNVP--EKGARKHPRGDNIQIDTKNILFICGGAFVDLEKTISESRHDSSIGFGAPI 333
Query: 326 RANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLME 385
RANMRTG +T+A V SSLL++V+S DLVAYGLIPEF+GRFPILVSLSAL E+QL+QVL E
Sbjct: 334 RANMRTGKVTEAAVASSLLQTVESSDLVAYGLIPEFVGRFPILVSLSALTENQLIQVLTE 393
Query: 386 PKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP 445
PKNALG+QYKKMF MN VKLHFT++ALR IA+KA++KNTGARGLR++LEN+L +AM+EIP
Sbjct: 394 PKNALGKQYKKMFQMNGVKLHFTENALRSIARKAISKNTGARGLRSILENVLVDAMYEIP 453
Query: 446 ETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHETKSAHENDSEVL 501
+ + G ++AV+VD+EAVG + G GAKIL+G L+R L E K NDSE +
Sbjct: 454 DIRTGDDVIDAVVVDEEAVGG-EGRGRGAKILYGKDALDRYLSEQK----NDSETM 504
>gi|168042097|ref|XP_001773526.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675228|gb|EDQ61726.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 433
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 278/424 (65%), Positives = 336/424 (79%), Gaps = 14/424 (3%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTP+EI + LD+FV+GQE+AKK+ + L + AVYNHYKRI++ SL K
Sbjct: 22 ELPTPREISQALDKFVVGQEKAKKAFSLFPSFNSLAIL---SVAVYNHYKRIHYESLLKS 78
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+ + G + E ++ VELEKSNVLLMGPTGSGKTLLAKTLAR VNVP
Sbjct: 79 NIR-------LTDEGAGHSDMEDEENDGVELEKSNVLLMGPTGSGKTLLAKTLARFVNVP 131
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNG 249
F I DAT LTQAGYVGED ES+LYKLL AA+F+V AAQ+GIVYIDEVDKI K AE+ N
Sbjct: 132 FVIADATTLTQAGYVGEDVESILYKLLMAAEFNVPAAQQGIVYIDEVDKITKKAENMNIS 191
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLKMLEGTVVNVP + G RKHPRGD+I +DTKDILFICGGAF+ LEKT
Sbjct: 192 RDVSGEGVQQALLKMLEGTVVNVP--EKGARKHPRGDHIQVDTKDILFICGGAFIELEKT 249
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I+ERRQDSSIGFGAPVRANMR L +A VTSSLLE V+S DL++YGLIPEFIGRFP+LV
Sbjct: 250 IAERRQDSSIGFGAPVRANMRVNKLVNAAVTSSLLELVESSDLISYGLIPEFIGRFPVLV 309
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SL+ALNEDQLVQVL EP+NALG+QYKKMF+MNNVKLH+T+ ALR IA+KAM KNTGARGL
Sbjct: 310 SLAALNEDQLVQVLTEPRNALGKQYKKMFAMNNVKLHYTEGALRRIAQKAMIKNTGARGL 369
Query: 430 RALLENILTEAMFEIPETKIGT-SSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLH 488
R+++E +LT++M+++P++ T ++AV++D++AVG D G GAKIL G+G L+ L+
Sbjct: 370 RSIMEALLTDSMYQVPDSVSETDEKIDAVVLDEDAVGPPDGVGSGAKILRGEGALDIYLN 429
Query: 489 ETKS 492
KS
Sbjct: 430 NMKS 433
>gi|168031008|ref|XP_001768014.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680856|gb|EDQ67289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 282/426 (66%), Positives = 335/426 (78%), Gaps = 25/426 (5%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP+EIC+ LD+FV+GQE+AKK+ I + AVYNHYKRIY S++K
Sbjct: 10 LPTPREICQALDKFVVGQEQAKKARILSV-------------AVYNHYKRIYFESMRKGN 56
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ G GV C END VELEKSNVLLMGPTGSGKTLLAKTLAR VNVPF
Sbjct: 57 AKP-----TNEGFGVSEVECE-END--VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPF 108
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNGR 250
I DAT+LTQAGYVGED ES+LYKLL A+F+V AAQ+GI+YIDEVDKI K AES+N R
Sbjct: 109 VIADATSLTQAGYVGEDVESILYKLLVEAEFNVLAAQQGIIYIDEVDKITKKAESKNISR 168
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKMLEGTVVNVP + G RKHPRG++I IDTKDILFICGGAFV LEK+I
Sbjct: 169 DVSGEGVQQALLKMLEGTVVNVP--EKGARKHPRGEHIQIDTKDILFICGGAFVELEKSI 226
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+ER+QDSSIGFGAPVRANMR L DA +TSSLLE+V+S DL++YGLIPEFIGRFP++VS
Sbjct: 227 AERKQDSSIGFGAPVRANMRGNKLIDAAITSSLLETVESSDLISYGLIPEFIGRFPVIVS 286
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
LSAL+EDQLVQVL EP+NALG+QYKKMF+MNNVKLH+T+ LR IA+KA+ KNTGARGLR
Sbjct: 287 LSALDEDQLVQVLTEPRNALGKQYKKMFAMNNVKLHYTEGGLRRIAQKAVVKNTGARGLR 346
Query: 431 ALLENILTEAMFEIPETKIGT-SSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHE 489
+ LE +LTEAM+++P++ V+AV++D++AVG+ D G GAKIL G G L+ L
Sbjct: 347 STLETVLTEAMYQVPDSISNEGEQVDAVVLDEDAVGAPDGNGEGAKILRGKGALDFYLRN 406
Query: 490 TKSAHE 495
K+ E
Sbjct: 407 LKTPSE 412
>gi|357498613|ref|XP_003619595.1| ATP-dependent Clp protease ATP-binding subunit clpX [Medicago
truncatula]
gi|355494610|gb|AES75813.1| ATP-dependent Clp protease ATP-binding subunit clpX [Medicago
truncatula]
Length = 672
Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust.
Identities = 302/437 (69%), Positives = 347/437 (79%), Gaps = 42/437 (9%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLP+PKEICKGLD+FVIGQ RAKK +L AVYNHYKRIYH++L K
Sbjct: 245 DLPSPKEICKGLDKFVIGQGRAKK-----VL----------SVAVYNHYKRIYHATLPK- 288
Query: 131 LVSDHLYVDSILGSGVKSGNCNV-ENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNV 189
GSG SG + ++DE VELEKSNVLLMGPTGSGKTLLAKTLAR VNV
Sbjct: 289 ------------GSGADSGISGILDDDENVELEKSNVLLMGPTGSGKTLLAKTLARFVNV 336
Query: 190 PFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNN 248
PF I DAT LTQAGYVGED ES+LYKLLAAAD++V AAQ+GI+YIDEVDKI K AES N
Sbjct: 337 PFVIADATTLTQAGYVGEDVESILYKLLAAADYNVAAAQQGIIYIDEVDKITKKAESLNI 396
Query: 249 GRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEK 308
RDVSGEGVQQALLKMLEGT+VNVP + G RK+PRGDNI IDTK+ILFICGGAF+ LEK
Sbjct: 397 SRDVSGEGVQQALLKMLEGTIVNVP--EKGARKNPRGDNIQIDTKNILFICGGAFIDLEK 454
Query: 309 TISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
TISERRQDSSIGFGAPVRAN+R+G + D+ V SSLLESV+S DL+AYGLIPEFIGRFPIL
Sbjct: 455 TISERRQDSSIGFGAPVRANIRSGRIIDSAVASSLLESVESSDLIAYGLIPEFIGRFPIL 514
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMN----------NVKLHFTDDALRLIAKK 418
VSLSAL E+QL+QVL EPK+ALG+QYKK+ MN VKLHFTD ALR+IAKK
Sbjct: 515 VSLSALTEEQLMQVLTEPKHALGKQYKKLVGMNEVSIYVCVFVRVKLHFTDKALRMIAKK 574
Query: 419 AMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILH 478
AMAKNTGARGLRAL+ENILT+AM+EIP+ K G+ ++AV+VD+E+VGS+ APGCG KIL
Sbjct: 575 AMAKNTGARGLRALIENILTDAMYEIPDIKTGSDRIDAVVVDEESVGSLTAPGCGGKILR 634
Query: 479 GDGELERVLHETKSAHE 495
GDG LE+ L + K + +
Sbjct: 635 GDGALEQYLAKIKDSED 651
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 28/32 (87%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKV 32
AVN CP CKTA++FRP+ +PL+G+F+E+G+V
Sbjct: 78 AVNLCPNCKTAYHFRPYNTSPLQGTFVEIGRV 109
>gi|226491966|ref|NP_001147507.1| ATP-dependent Clp protease ATP-binding subunit clpX [Zea mays]
gi|195611856|gb|ACG27758.1| ATP-dependent Clp protease ATP-binding subunit clpX [Zea mays]
Length = 559
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 293/429 (68%), Positives = 343/429 (79%), Gaps = 34/429 (7%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
PTPKEIC+GLD+FVIGQ+RAKK +L AVYNHYKRIY SL
Sbjct: 138 FPTPKEICRGLDKFVIGQQRAKK-----VL----------SVAVYNHYKRIYCESLINRS 182
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+D DS C + D +VELEKSN+L+MGPTGSGKTLLAKTLAR VNVPF
Sbjct: 183 AADCSQSDS----------CTSDTD-MVELEKSNILVMGPTGSGKTLLAKTLARFVNVPF 231
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNGR 250
I DAT+LTQAGYVGED ES+LYKLLAAADFDV AAQ+GIVYIDEVDKI K AES N R
Sbjct: 232 VIADATSLTQAGYVGEDVESILYKLLAAADFDVAAAQQGIVYIDEVDKITKKAESINLSR 291
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKMLEGTVV+VP + G R+HPRGDNI IDTK+ILFICGGAFV LEKTI
Sbjct: 292 DVSGEGVQQALLKMLEGTVVSVP--EKGARRHPRGDNIQIDTKNILFICGGAFVDLEKTI 349
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
SERR DSSIGF A VR+NMR+GG+ +A +TSSLL+SV+SGDL+AYGLIPEF+GRFPILV
Sbjct: 350 SERRHDSSIGFRAQVRSNMRSGGVINAEITSSLLKSVESGDLIAYGLIPEFVGRFPILVG 409
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
LS+L+EDQLV+VL EPKNALGRQY K+F MN+VKLHFT++ALRLIAK+A++KNTGARGLR
Sbjct: 410 LSSLSEDQLVEVLTEPKNALGRQYTKLFEMNDVKLHFTEEALRLIAKRAISKNTGARGLR 469
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHET 490
++LE+ILTEAM+EIPET+IG ++AV+VD+E+VGSV+ G GAKIL G+ L+ L
Sbjct: 470 SILESILTEAMYEIPETRIGKDKIDAVVVDEESVGSVNQHGIGAKILCGEKALDVYL--- 526
Query: 491 KSAHENDSE 499
A+ N+ E
Sbjct: 527 --ANHNNKE 533
>gi|413936321|gb|AFW70872.1| ATP-dependent Clp protease ATP-binding subunit clpX [Zea mays]
Length = 559
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 292/429 (68%), Positives = 342/429 (79%), Gaps = 34/429 (7%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
PTPKEIC+GLD+FVIGQ+RAKK +L AVYNHYKRIY SL
Sbjct: 138 FPTPKEICRGLDKFVIGQQRAKK-----VL----------SVAVYNHYKRIYCESLINRS 182
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+D DS C + D +VELEKSN+L+MGPTGSGKTLLAKTLAR VNVPF
Sbjct: 183 AADCSQSDS----------CTSDTD-MVELEKSNILVMGPTGSGKTLLAKTLARFVNVPF 231
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNGR 250
I DAT+LTQAGYVGED ES+LYKLLAAADFDV AAQ+GIVYIDEVDKI K AES N R
Sbjct: 232 VIADATSLTQAGYVGEDVESILYKLLAAADFDVAAAQQGIVYIDEVDKITKKAESINLSR 291
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKMLEGTVV+VP + G R+HPRGDNI IDTK+ILFICGGAFV LEKTI
Sbjct: 292 DVSGEGVQQALLKMLEGTVVSVP--EKGARRHPRGDNIQIDTKNILFICGGAFVDLEKTI 349
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
SERR DSSIGF A VR+NMR+GG+ +A +TSSLL+SV+SGDL+AYGLIPEF+GRFPILV
Sbjct: 350 SERRHDSSIGFRAQVRSNMRSGGVINAEITSSLLKSVESGDLIAYGLIPEFVGRFPILVG 409
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
LS+L+EDQLV+VL EPKNALGRQY K+F MN+VKLHFT++ALRLIAK+A++KNTGARGLR
Sbjct: 410 LSSLSEDQLVEVLTEPKNALGRQYTKLFEMNDVKLHFTEEALRLIAKRAISKNTGARGLR 469
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHET 490
++LE+ILTEAM+EIPET+ G ++AV+VD+E+VGSV+ G GAKIL G+ L+ L
Sbjct: 470 SILESILTEAMYEIPETRTGKDKIDAVVVDEESVGSVNQHGIGAKILCGEKALDVYL--- 526
Query: 491 KSAHENDSE 499
A+ N+ E
Sbjct: 527 --ANHNNKE 533
>gi|222622641|gb|EEE56773.1| hypothetical protein OsJ_06335 [Oryza sativa Japonica Group]
Length = 479
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 286/419 (68%), Positives = 332/419 (79%), Gaps = 29/419 (6%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
PTPKEIC+GLD+FVIGQERAKK AVYNHYKRI+ L
Sbjct: 59 FPTPKEICRGLDKFVIGQERAKKV---------------LSVAVYNHYKRIHCELLSSRS 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
D DS C + D VELEKSN+L+MGPTGSGKTLLAKTLAR VNVPF
Sbjct: 104 AGDCSETDS----------CASDTDG-VELEKSNILVMGPTGSGKTLLAKTLARFVNVPF 152
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNGR 250
I DAT LTQAGYVGED ES+LYKLLAAADFDV AAQ+GIVYIDEVDKI K AES N R
Sbjct: 153 VIADATTLTQAGYVGEDVESILYKLLAAADFDVAAAQQGIVYIDEVDKITKKAESINLSR 212
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKMLEGTVV+VP + G R+HPRGDNI IDTK+ILFICGGAFV LEKTI
Sbjct: 213 DVSGEGVQQALLKMLEGTVVSVP--EKGARRHPRGDNIQIDTKNILFICGGAFVDLEKTI 270
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
SERR DSSIGF AP+R+NMRTGG+ +A +TSSLLESV+SGDL+AYGLIPEF+GRFPILVS
Sbjct: 271 SERRHDSSIGFQAPIRSNMRTGGVINAEITSSLLESVESGDLIAYGLIPEFVGRFPILVS 330
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
LS+L+EDQLV+VL +PKNALGRQY K+F MN+VKLHFT+ ALRLI+K+A+AKNTGARGLR
Sbjct: 331 LSSLSEDQLVEVLTKPKNALGRQYTKLFEMNDVKLHFTEKALRLISKRAIAKNTGARGLR 390
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHE 489
++LE++LTE+M+EIPE + G ++AV+VD+++VGS + G GAKIL G+G L+ L E
Sbjct: 391 SILESLLTESMYEIPEIRTGKDKIDAVVVDEDSVGSTNQHGSGAKILCGEGALDLYLDE 449
>gi|224120816|ref|XP_002318424.1| predicted protein [Populus trichocarpa]
gi|222859097|gb|EEE96644.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 282/432 (65%), Positives = 325/432 (75%), Gaps = 30/432 (6%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE- 130
PTPK+ICK LD+FVIGQ+RAKK AVYNHYKRI+ S++K
Sbjct: 10 FPTPKDICKALDKFVIGQQRAKKV---------------LSVAVYNHYKRIHLESVKKWS 54
Query: 131 -LVSDHLYVDSILGSGVKSGNC---------NVENDEIVELEKSNVLLMGPTGSGKTLLA 180
L V+ V C ++E VELEKSN+LLMGPTGSGKTLLA
Sbjct: 55 VLFLSMALVNPFFPFPVTVMVCLYFPCNEKAETMDEEEVELEKSNILLMGPTGSGKTLLA 114
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
KTLAR VNVPF I DAT LTQA YVGED ES+LYKLL AAD++V AAQ+GI+YIDEVDKI
Sbjct: 115 KTLARFVNVPFVIADATTLTQARYVGEDVESMLYKLLTAADYNVAAAQQGIIYIDEVDKI 174
Query: 241 VK-AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K AES N RDVSGEGVQQALLKMLEGTVVNVP D RKHPRGDNI I+TKDILFIC
Sbjct: 175 TKKAESVNISRDVSGEGVQQALLKMLEGTVVNVP--DKEARKHPRGDNIQINTKDILFIC 232
Query: 300 GGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIP 359
GGAF+ LEKTISERRQDSSIGFGAPVRANMRTGG+T A +TSSLLE+ +S DLV+YGLIP
Sbjct: 233 GGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGVTSAAMTSSLLETAESSDLVSYGLIP 292
Query: 360 EFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKA 419
EF+GRFPILVSLSAL EDQLVQVL EPKNALG+QY+K+F MN VKLH T+ ALR IA KA
Sbjct: 293 EFVGRFPILVSLSALTEDQLVQVLTEPKNALGKQYRKLFQMNGVKLHVTEHALRSIAIKA 352
Query: 420 MAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHG 479
+ KNTGAR LR++LENIL ++M+EIP+ + G ++AV+VD+EA+G G GAKIL+G
Sbjct: 353 ITKNTGARALRSILENILMDSMYEIPDVRRGADIIDAVVVDEEAIGP-KQRGAGAKILYG 411
Query: 480 DGELERVLHETK 491
G L+ L + K
Sbjct: 412 RGALDHYLSKNK 423
>gi|47847699|dbj|BAD21479.1| putative ATP-dependent Clp protease ATP-binding subunit ClpX1
(CLPX) [Oryza sativa Japonica Group]
Length = 554
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 286/419 (68%), Positives = 332/419 (79%), Gaps = 29/419 (6%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
PTPKEIC+GLD+FVIGQERAKK AVYNHYKRI+ L
Sbjct: 147 FPTPKEICRGLDKFVIGQERAKKV---------------LSVAVYNHYKRIHCELLSSRS 191
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
D DS C + D VELEKSN+L+MGPTGSGKTLLAKTLAR VNVPF
Sbjct: 192 AGDCSETDS----------CASDTDG-VELEKSNILVMGPTGSGKTLLAKTLARFVNVPF 240
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNGR 250
I DAT LTQAGYVGED ES+LYKLLAAADFDV AAQ+GIVYIDEVDKI K AES N R
Sbjct: 241 VIADATTLTQAGYVGEDVESILYKLLAAADFDVAAAQQGIVYIDEVDKITKKAESINLSR 300
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKMLEGTVV+VP + G R+HPRGDNI IDTK+ILFICGGAFV LEKTI
Sbjct: 301 DVSGEGVQQALLKMLEGTVVSVP--EKGARRHPRGDNIQIDTKNILFICGGAFVDLEKTI 358
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
SERR DSSIGF AP+R+NMRTGG+ +A +TSSLLESV+SGDL+AYGLIPEF+GRFPILVS
Sbjct: 359 SERRHDSSIGFQAPIRSNMRTGGVINAEITSSLLESVESGDLIAYGLIPEFVGRFPILVS 418
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
LS+L+EDQLV+VL +PKNALGRQY K+F MN+VKLHFT+ ALRLI+K+A+AKNTGARGLR
Sbjct: 419 LSSLSEDQLVEVLTKPKNALGRQYTKLFEMNDVKLHFTEKALRLISKRAIAKNTGARGLR 478
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHE 489
++LE++LTE+M+EIPE + G ++AV+VD+++VGS + G GAKIL G+G L+ L E
Sbjct: 479 SILESLLTESMYEIPEIRTGKDKIDAVVVDEDSVGSTNQHGSGAKILCGEGALDLYLDE 537
>gi|357142782|ref|XP_003572692.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Brachypodium distachyon]
Length = 548
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 281/417 (67%), Positives = 332/417 (79%), Gaps = 29/417 (6%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
PTPKEIC+GLD+FVIGQERAKK +L AVYNHYKRI S
Sbjct: 129 FPTPKEICRGLDKFVIGQERAKK-----VL----------SVAVYNHYKRISCESFSSRS 173
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
D D+ C + D +VELEKSN+L+MGPTGSGKTLLAKTLAR VNVPF
Sbjct: 174 AGDSSESDT----------CTSDTD-MVELEKSNILVMGPTGSGKTLLAKTLARFVNVPF 222
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNGR 250
I DAT LTQAGYVGED ES+LYKLLAAADFD+ AAQ+GIVYIDEVDKI K AES N R
Sbjct: 223 VIADATTLTQAGYVGEDVESILYKLLAAADFDIAAAQQGIVYIDEVDKITKKAESMNLSR 282
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKMLEGTVV+VP + G R+HPRGDNI IDTK+ILFICGGAFV LEKTI
Sbjct: 283 DVSGEGVQQALLKMLEGTVVSVP--EKGARRHPRGDNIQIDTKNILFICGGAFVDLEKTI 340
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
SERR DSSIGF APVR+NMRTG + +A +TS+LLE+V+SGDL+AYGLIPEF+GRFP+LVS
Sbjct: 341 SERRHDSSIGFQAPVRSNMRTGSVINAEITSTLLETVESGDLIAYGLIPEFVGRFPVLVS 400
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
LS+L+EDQLV+VL +PKNALGRQY K+F MN+VKLHFT+ ALRLI+K+A++KNTGARGLR
Sbjct: 401 LSSLSEDQLVEVLTKPKNALGRQYTKLFEMNDVKLHFTEKALRLISKRAISKNTGARGLR 460
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVL 487
++LE++LTEAM+EIPE + G ++AV+VD+E++GS + G GAKIL G+G L+ L
Sbjct: 461 SILESVLTEAMYEIPEIRTGKDKIDAVVVDEESIGSSNQHGFGAKILSGEGALDLYL 517
>gi|413922727|gb|AFW62659.1| hypothetical protein ZEAMMB73_067276 [Zea mays]
gi|413922728|gb|AFW62660.1| hypothetical protein ZEAMMB73_067276 [Zea mays]
gi|413922729|gb|AFW62661.1| hypothetical protein ZEAMMB73_067276 [Zea mays]
gi|413922730|gb|AFW62662.1| hypothetical protein ZEAMMB73_067276 [Zea mays]
Length = 346
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 264/346 (76%), Positives = 297/346 (85%), Gaps = 8/346 (2%)
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
MGPTGSGKTLLAKTLAR VNVPF I DAT LTQAGYVGED ES+LYKLL ADF+V+AAQ
Sbjct: 1 MGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADFNVQAAQ 60
Query: 229 RGIVYIDEVDKIVK-AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
+G+VYIDEVDKI K AES N RDVSGEGVQQALLKMLEGT+VNVP + G RKHPRGDN
Sbjct: 61 QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP--EKGARKHPRGDN 118
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESV 347
I IDTKDILFICGGAFV LEKTISERRQDSSIGFGAPVRANMR GG++ A VTSSLLESV
Sbjct: 119 IQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGGISSAQVTSSLLESV 178
Query: 348 DSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHF 407
+SGDL+AYGLIPEFIGRFPILVSL+ALNEDQLVQVL+EPKNALG+Q+KK+FSMNNVKLHF
Sbjct: 179 ESGDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLIEPKNALGKQFKKLFSMNNVKLHF 238
Query: 408 TDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSV 467
TD ALR+IAKKAM+KNTGARGLR +LENIL ++M+EIP+ K G ++AV+VD++AVGSV
Sbjct: 239 TDGALRIIAKKAMSKNTGARGLRTILENILMDSMYEIPDAKSGEKRIDAVVVDEDAVGSV 298
Query: 468 DAPGCGAKILHGDGELERVLHETKSA-----HENDSEVLLKSPGAC 508
D PGCGAKIL+GDG L++ L + K + E D E L S A
Sbjct: 299 DQPGCGAKILYGDGALDQYLSQIKVSGDGVGSEMDGEAELSSSRAI 344
>gi|226532215|ref|NP_001140773.1| uncharacterized protein LOC100272848 [Zea mays]
gi|194701024|gb|ACF84596.1| unknown [Zea mays]
Length = 346
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/326 (78%), Positives = 287/326 (88%), Gaps = 3/326 (0%)
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
MGPTGSGKTLLAKTLAR VNVPF I DAT LTQAGYVGED ES+LYKLL ADF+V+AAQ
Sbjct: 1 MGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADFNVQAAQ 60
Query: 229 RGIVYIDEVDKIVK-AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
+G+VYIDEVDKI K AES N RDVSGEGVQQALLKMLEGT+VNVP + G RKHPRGDN
Sbjct: 61 QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP--EKGARKHPRGDN 118
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESV 347
I IDTKDILFICGGAFV LEKTISERRQDSSIGFGAPVRANMR GG + A VTSSLLESV
Sbjct: 119 IQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRVGGTSSAQVTSSLLESV 178
Query: 348 DSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHF 407
+SGDL+AYGLIPEFIGRFPILVSL+ALNEDQLVQVL EPKNALG+Q+KK+FSMN+VKLHF
Sbjct: 179 ESGDLIAYGLIPEFIGRFPILVSLTALNEDQLVQVLTEPKNALGKQFKKLFSMNDVKLHF 238
Query: 408 TDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSV 467
TD ALR+IA+KAM+KNTGARGLR +LENIL ++M+EIP+ K G ++AV+VD++AVGSV
Sbjct: 239 TDGALRIIAEKAMSKNTGARGLRTILENILMDSMYEIPDAKSGEKRIDAVVVDEDAVGSV 298
Query: 468 DAPGCGAKILHGDGELERVLHETKSA 493
D PG GAKIL+GDG L++ L K A
Sbjct: 299 DQPGYGAKILYGDGALDQYLSHIKVA 324
>gi|147791350|emb|CAN75136.1| hypothetical protein VITISV_040753 [Vitis vinifera]
Length = 600
Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust.
Identities = 275/432 (63%), Positives = 315/432 (72%), Gaps = 33/432 (7%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+ PTPKEIC+GLD+FVIGQERAKK AVYNHYKRIYH SLQK
Sbjct: 162 NFPTPKEICRGLDKFVIGQERAKKV---------------LSVAVYNHYKRIYHZSLQKC 206
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+ + +++ VELEKSN+LLMGPTGSG T + +
Sbjct: 207 DPTWRIRP----AEDTSDDKAEATDNDSVELEKSNILLMGPTGSGSTGSLSIIMLFLITW 262
Query: 191 FTIT--------DATA--LTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
FT D T L AGYVGED ES+LYKLL AD++V AAQ+GIVYIDEVDKI
Sbjct: 263 FTWYFHFFKDREDITCQNLGTAGYVGEDVESILYKLLMVADYNVVAAQQGIVYIDEVDKI 322
Query: 241 VK-AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K AES N RDVSGEGVQQALLKMLEGTVVNVP + G RKHPRGDNI IDTKDILFIC
Sbjct: 323 TKKAESLNLSRDVSGEGVQQALLKMLEGTVVNVP--EKGARKHPRGDNIQIDTKDILFIC 380
Query: 300 GGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIP 359
GGAF+ LEKTISERRQDSSIGFGAPVRANMRTGG T A V SSLLE+V+S DL++YGLIP
Sbjct: 381 GGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGPTXAAVASSLLETVESSDLISYGLIP 440
Query: 360 EFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKA 419
EF+GRFPILVSLSAL E+QLV+VL EPKNALG+QYKKMF MN VKLHFT +ALRLI++KA
Sbjct: 441 EFVGRFPILVSLSALTENQLVEVLTEPKNALGKQYKKMFQMNGVKLHFTKNALRLISRKA 500
Query: 420 MAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHG 479
+KNTGARGLR+ LENIL +AM+EIP+ + G ++AV+VD EAVGS D G GAKIL+G
Sbjct: 501 XSKNTGARGLRSXLENILMBAMYEIPDVRTGNDIIDAVVVDDEAVGS-DGHGFGAKILYG 559
Query: 480 DGELERVLHETK 491
G L+ L + K
Sbjct: 560 KGALDCYLSQHK 571
>gi|238005674|gb|ACR33872.1| unknown [Zea mays]
Length = 362
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 255/343 (74%), Positives = 299/343 (87%), Gaps = 8/343 (2%)
Query: 158 IVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLL 217
+VELEKSN+L+MGPTGSGKTLLAKTLAR VNVPF I DAT+LTQAGYVGED ES+LYKLL
Sbjct: 1 MVELEKSNILVMGPTGSGKTLLAKTLARFVNVPFVIADATSLTQAGYVGEDVESILYKLL 60
Query: 218 AAADFDVEAAQRGIVYIDEVDKIVK-AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPD 276
AAADFDV AAQ+GIVYIDEVDKI K AES N RDVSGEGVQQALLKMLEGTVV+VP +
Sbjct: 61 AAADFDVAAAQQGIVYIDEVDKITKKAESINLSRDVSGEGVQQALLKMLEGTVVSVP--E 118
Query: 277 NGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTD 336
G R+HPRGDNI IDTK+ILFICGGAFV LEKTISERR DSSIGF A VR+NMR+GG+ +
Sbjct: 119 KGARRHPRGDNIQIDTKNILFICGGAFVDLEKTISERRHDSSIGFRAQVRSNMRSGGVIN 178
Query: 337 ALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKK 396
A +TSSLL+SV+SGDL+AYGLIPEF+GRFPILV LS+L+EDQLV+VL EPKNALGRQY K
Sbjct: 179 AEITSSLLKSVESGDLIAYGLIPEFVGRFPILVGLSSLSEDQLVEVLTEPKNALGRQYTK 238
Query: 397 MFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNA 456
+F MN+VKLHFT++ALRLIAK+A++KNTGARGLR++LE+ILTEAM+EIPET+ G ++A
Sbjct: 239 LFEMNDVKLHFTEEALRLIAKRAISKNTGARGLRSILESILTEAMYEIPETRTGKDKIDA 298
Query: 457 VLVDKEAVGSVDAPGCGAKILHGDGELERVLHETKSAHENDSE 499
V+VD+E+VGSV+ G GAKIL G+ L+ L A+ N+ E
Sbjct: 299 VVVDEESVGSVNQHGIGAKILCGEKALDVYL-----ANHNNKE 336
>gi|357498615|ref|XP_003619596.1| ATP-dependent Clp protease ATP-binding subunit clpX [Medicago
truncatula]
gi|355494611|gb|AES75814.1| ATP-dependent Clp protease ATP-binding subunit clpX [Medicago
truncatula]
Length = 386
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 262/354 (74%), Positives = 302/354 (85%), Gaps = 13/354 (3%)
Query: 153 VENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESV 212
+++DE VELEKSNVLLMGPTGSGKTLLAKTLAR VNVPF I DAT LTQAGYVGED ES+
Sbjct: 14 LDDDENVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESI 73
Query: 213 LYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNGRDVSGEGVQQALLKMLEGTVVN 271
LYKLLAAAD++V AAQ+GI+YIDEVDKI K AES N RDVSGEGVQQALLKMLEGT+VN
Sbjct: 74 LYKLLAAADYNVAAAQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 133
Query: 272 VPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRT 331
VP + G RK+PRGDNI IDTK+ILFICGGAF+ LEKTISERRQDSSIGFGAPVRAN+R+
Sbjct: 134 VP--EKGARKNPRGDNIQIDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRANIRS 191
Query: 332 GGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALG 391
G + D+ V SSLLESV+S DL+AYGLIPEFIGRFPILVSLSAL E+QL+QVL EPK+ALG
Sbjct: 192 GRIIDSAVASSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEEQLMQVLTEPKHALG 251
Query: 392 RQYKKMFSMN----------NVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAM 441
+QYKK+ MN VKLHFTD ALR+IAKKAMAKNTGARGLRAL+ENILT+AM
Sbjct: 252 KQYKKLVGMNEVSIYVCVFVRVKLHFTDKALRMIAKKAMAKNTGARGLRALIENILTDAM 311
Query: 442 FEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHETKSAHE 495
+EIP+ K G+ ++AV+VD+E+VGS+ APGCG KIL GDG LE+ L + K + +
Sbjct: 312 YEIPDIKTGSDRIDAVVVDEESVGSLTAPGCGGKILRGDGALEQYLAKIKDSED 365
>gi|413922731|gb|AFW62663.1| hypothetical protein ZEAMMB73_067276 [Zea mays]
Length = 324
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/277 (83%), Positives = 253/277 (91%), Gaps = 3/277 (1%)
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
MGPTGSGKTLLAKTLAR VNVPF I DAT LTQAGYVGED ES+LYKLL ADF+V+AAQ
Sbjct: 1 MGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADFNVQAAQ 60
Query: 229 RGIVYIDEVDKIVK-AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
+G+VYIDEVDKI K AES N RDVSGEGVQQALLKMLEGT+VNVP + G RKHPRGDN
Sbjct: 61 QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP--EKGARKHPRGDN 118
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESV 347
I IDTKDILFICGGAFV LEKTISERRQDSSIGFGAPVRANMR GG++ A VTSSLLESV
Sbjct: 119 IQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGGISSAQVTSSLLESV 178
Query: 348 DSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHF 407
+SGDL+AYGLIPEFIGRFPILVSL+ALNEDQLVQVL+EPKNALG+Q+KK+FSMNNVKLHF
Sbjct: 179 ESGDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLIEPKNALGKQFKKLFSMNNVKLHF 238
Query: 408 TDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEI 444
TD ALR+IAKKAM+KNTGARGLR +LENIL ++M+E+
Sbjct: 239 TDGALRIIAKKAMSKNTGARGLRTILENILMDSMYEV 275
>gi|147866723|emb|CAN80513.1| hypothetical protein VITISV_026067 [Vitis vinifera]
Length = 469
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/296 (79%), Positives = 263/296 (88%), Gaps = 4/296 (1%)
Query: 201 QAGYVGEDAESVLYKLLA-AADFDVEAAQRGIVYIDEVDKIVK-AESRNNGRDVSGEGVQ 258
+ G +++ S++ KLL A+F+VEAAQ+GIVYIDEVDKI K AES N GRDVSGEGVQ
Sbjct: 151 KKGSSAQESASLVKKLLGLVAEFNVEAAQQGIVYIDEVDKITKKAESSNTGRDVSGEGVQ 210
Query: 259 QALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSS 318
QALLKMLEGT+VNVP D G RKHPRGDNI IDTKDILFICGGAFV LEKTISERRQDSS
Sbjct: 211 QALLKMLEGTIVNVP--DKGGRKHPRGDNIQIDTKDILFICGGAFVDLEKTISERRQDSS 268
Query: 319 IGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQ 378
IGFGAPVRANMRTGGLTDA+VTSSLLESV+SGDL+AYGLIPEFIGRFPILVSLSALNEDQ
Sbjct: 269 IGFGAPVRANMRTGGLTDAVVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLSALNEDQ 328
Query: 379 LVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILT 438
LVQVL EPKNALG+QYKKM SMNNVKLHFT++ALRLIAKKA+AKNTGAR LRA+LE ILT
Sbjct: 329 LVQVLTEPKNALGKQYKKMLSMNNVKLHFTENALRLIAKKAIAKNTGARSLRAILEKILT 388
Query: 439 EAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHETKSAH 494
EAMFEIP+ K GT V+AVLVD+EAV S++ GCGAK+L G+G LE+ LHETKS++
Sbjct: 389 EAMFEIPDVKTGTDMVDAVLVDEEAVESIEEQGCGAKVLRGEGALEQFLHETKSSN 444
>gi|218197157|gb|EEC79584.1| hypothetical protein OsI_20758 [Oryza sativa Indica Group]
Length = 495
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/419 (56%), Positives = 302/419 (72%), Gaps = 30/419 (7%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
PTPKEI +GLDEFV+GQ++AKK C AV+NHYKRIY S +
Sbjct: 46 FPTPKEIRRGLDEFVVGQDKAKKV---------------LCVAVHNHYKRIYSESSNCSM 90
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
S G+ ++ D+ +ELEKSN+LL+GPTGSGKTLLAKTLAR +VPF
Sbjct: 91 KSS------------ACGDVSMSGDDDIELEKSNILLIGPTGSGKTLLAKTLARFADVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNGR 250
I DATA+TQAGY GED ES++ LLAAA F+VEA +RGIVYIDEVDK++K E + R
Sbjct: 139 VIADATAITQAGYSGEDVESIICNLLAAAKFNVEATERGIVYIDEVDKLIKKVECNEDRR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQ ALLK+ EGTV+NVP N + + ++TK+ILFICGG+F GLEK +
Sbjct: 199 DVSGEGVQHALLKIFEGTVINVPRKRN--QDSISDGYVEVNTKNILFICGGSFSGLEKIV 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
SER ++ +GFG P ++R G T+A+ S +E+++S DL+AYGLIPEFIGR PI V
Sbjct: 257 SERHRNCHMGFGLPTSGDLRNCGWTNAIGESCCVEAIESDDLIAYGLIPEFIGRLPITVG 316
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L+E QLVQVLMEPKNA+G+QYKK+F MN+VKLHFT++ALRLIAKKA ++ TGAR LR
Sbjct: 317 LNDLSEAQLVQVLMEPKNAIGKQYKKLFKMNDVKLHFTENALRLIAKKAASRETGARELR 376
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHE 489
+++E+ILTEAMFEIP+ + G + AVLVD+E+VGSV + GCGAKI DG LE +++
Sbjct: 377 SIMEDILTEAMFEIPDAREGKEKIIAVLVDEESVGSVHSRGCGAKIFRDDGALELYVYQ 435
>gi|357128686|ref|XP_003566001.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Brachypodium distachyon]
Length = 485
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/422 (57%), Positives = 299/422 (70%), Gaps = 34/422 (8%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
PTPKEI +GLD+FV+GQ++AKK C AV+NHYKRIY+ E
Sbjct: 34 FPTPKEIRRGLDQFVVGQDKAKKV---------------LCVAVHNHYKRIYN-----EP 73
Query: 132 VSDHLYVDSILGSGVKSGNCNVEN--DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNV 189
S++ V S + +CNV D+ +ELEKSN+LL+GPTGSGKTLLAKTLAR NV
Sbjct: 74 SSNNSAVTS-------AADCNVSTSGDDDIELEKSNILLIGPTGSGKTLLAKTLARFANV 126
Query: 190 PFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNN 248
PF I DATA+TQAGY GED ES+LYKLLAAAD +VEAA+RGI+YIDEVDK+ K + +
Sbjct: 127 PFVIADATAITQAGYSGEDVESILYKLLAAADCNVEAAERGIIYIDEVDKLTKKVGCQED 186
Query: 249 GRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN-IPIDTKDILFICGGAFVGLE 307
RD+SGEGVQQALLKM EGTV+NVP N +H + +DTK+ILFICGGAF L
Sbjct: 187 WRDISGEGVQQALLKMFEGTVINVPRKRN---QHSVSHGYVEVDTKNILFICGGAFSDLG 243
Query: 308 KTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPI 367
K ISER GFG P ++ T+AL SSLLE +++ DL+AYGL PEFIGR PI
Sbjct: 244 KIISERHHRCPFGFGTPKCRELQDYASTNALEESSLLEVIENDDLIAYGLTPEFIGRLPI 303
Query: 368 LVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGAR 427
V L+ L EDQL+QVL EPKNA+G+QYKK F MNNVKLH T++ALRLIA+KA A+ TGAR
Sbjct: 304 TVGLAHLTEDQLIQVLREPKNAIGKQYKKWFKMNNVKLHLTENALRLIARKAAARETGAR 363
Query: 428 GLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVL 487
GLR+++E+ILTEAMFEIP+ G V AV+VD+E+VG + GCGAKI DG LE L
Sbjct: 364 GLRSIMESILTEAMFEIPDAGEGKQKVIAVVVDEESVGPLSRQGCGAKIFRDDGALELYL 423
Query: 488 HE 489
++
Sbjct: 424 YK 425
>gi|222632348|gb|EEE64480.1| hypothetical protein OsJ_19330 [Oryza sativa Japonica Group]
Length = 504
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/422 (55%), Positives = 306/422 (72%), Gaps = 27/422 (6%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
PTPKEI +GLDEFV+GQ++AKK + +LV +++ C AV+ + I +SS
Sbjct: 46 FPTPKEIRRGLDEFVVGQDKAKKVNETSLLVGVVL-----CVAVHITPRGIQNSS----- 95
Query: 132 VSDHLYVDSILGSGVKSGNC---NVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVN 188
+KS C ++ D+ +ELEKSN+LL+GPTGSGKTLLAKTLAR +
Sbjct: 96 -----------NCSMKSSACGDVSMSGDDDIELEKSNILLIGPTGSGKTLLAKTLARFAD 144
Query: 189 VPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRN 247
VPF I DATA+TQAGY GED ES++ LLAAA F+VEA +RGIVYIDEVDK++K E
Sbjct: 145 VPFVIADATAITQAGYSGEDVESIICNLLAAAKFNVEATERGIVYIDEVDKLIKKVECNE 204
Query: 248 NGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLE 307
+ RDVSGEGVQ ALLK+ EGTV+NVP N + + ++TK+ILFICGG+F GLE
Sbjct: 205 DRRDVSGEGVQHALLKIFEGTVINVPRKRN--QDSISDGYVEVNTKNILFICGGSFSGLE 262
Query: 308 KTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPI 367
K +SER ++ +GFG P ++R G T+A+ S +E+++S DL+AYGLIPEFIGR PI
Sbjct: 263 KIVSERHRNCHMGFGLPTSGDLRNCGWTNAIGESCCVEAIESDDLIAYGLIPEFIGRLPI 322
Query: 368 LVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGAR 427
V L+ L+E QLVQVLMEPKNA+G+QYKK+F MN+VKLHFT++ALRLIAKKA ++ TGAR
Sbjct: 323 TVGLNDLSEAQLVQVLMEPKNAIGKQYKKLFKMNDVKLHFTENALRLIAKKAASRETGAR 382
Query: 428 GLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVL 487
LR+++E+ILTEAMFEIP+ + G + AVLVD+E+VGSV + GCGAKI DG LE +
Sbjct: 383 ELRSIMEDILTEAMFEIPDAREGKEKIIAVLVDEESVGSVHSRGCGAKIFRDDGALELYV 442
Query: 488 HE 489
++
Sbjct: 443 YQ 444
>gi|242088601|ref|XP_002440133.1| hypothetical protein SORBIDRAFT_09g026620 [Sorghum bicolor]
gi|241945418|gb|EES18563.1| hypothetical protein SORBIDRAFT_09g026620 [Sorghum bicolor]
Length = 546
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/393 (58%), Positives = 293/393 (74%), Gaps = 27/393 (6%)
Query: 103 DMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELE 162
D+ V V+ AV+NHYKRIY+ S S+ V S+ GV + +C D+ +ELE
Sbjct: 115 DLAVQVLSV--AVHNHYKRIYNES------SNKCSVKSLARGGV-TASC----DDDIELE 161
Query: 163 KSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADF 222
KSN+LL+GPTG+GKTLLAKTLAR VNVPF I DATA+TQAGY GED ESV+YKLL AADF
Sbjct: 162 KSNILLIGPTGTGKTLLAKTLARYVNVPFVIADATAITQAGYSGEDVESVIYKLLVAADF 221
Query: 223 DVEAAQRGIVYIDEVDKIVK-AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRK 281
+++AA+ GIVYIDEVDK+ K A+ R + RDVSGEGVQQALLK+ EGTV++VP RK
Sbjct: 222 NIKAAEHGIVYIDEVDKLTKKADCREDRRDVSGEGVQQALLKIFEGTVISVP------RK 275
Query: 282 HPRGDNIP-----IDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTD 336
+ DN+P ++T++ILFICGGAF GLEK ++ER Q +GFG P+ +R T
Sbjct: 276 RSQ-DNMPQGYVEVNTRNILFICGGAFFGLEKIVAERHQHP-VGFGIPICHELRNCSWTT 333
Query: 337 ALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKK 396
AL S +++V++ DL+AYGLIPEFIGR PI V L+ L+E+QLVQVL EPKNA+G+QYKK
Sbjct: 334 ALQESCSIDTVENDDLIAYGLIPEFIGRLPITVGLNNLSEEQLVQVLREPKNAIGKQYKK 393
Query: 397 MFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNA 456
+F MN+VKL+FTD+ALR+IAKKA AK TGARGLR+++E+ILTEAMFEIP+ + G V A
Sbjct: 394 LFKMNDVKLYFTDNALRMIAKKAAAKETGARGLRSIMEDILTEAMFEIPDAREGKEKVIA 453
Query: 457 VLVDKEAVGSVDAPGCGAKILHGDGELERVLHE 489
VLVD+E+VG + G GAKI DG LE ++
Sbjct: 454 VLVDEESVGPLHHRGYGAKIFRDDGALELYVYH 486
>gi|326504532|dbj|BAJ91098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 491
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/422 (54%), Positives = 286/422 (67%), Gaps = 44/422 (10%)
Query: 76 KEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDH 135
KEI +GLD++V+GQ++AKK C AV+NHYKRIY K
Sbjct: 47 KEIRRGLDQYVVGQDKAKKV---------------LCVAVHNHYKRIYSEPSNK------ 85
Query: 136 LYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITD 195
S S + E+D ELEKSN+LL+GPTGSGKTLLAKTLAR NVPF I D
Sbjct: 86 ---SSSQASAGRDAGTAAEDD--TELEKSNILLLGPTGSGKTLLAKTLARFANVPFVIAD 140
Query: 196 ATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNGRDVSG 254
ATA+TQAGY GED ES++YKLL AADF+VEAA+RGI+YIDEVDK+ K + + RDVSG
Sbjct: 141 ATAVTQAGYSGEDVESIVYKLLVAADFNVEAAERGIIYIDEVDKLAKKVGCQEDRRDVSG 200
Query: 255 EGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN------IPIDTKDILFICGGAFVGLEK 308
EGVQQALLKM EGTV++VP RK R N + +DT +ILFICGGAF L K
Sbjct: 201 EGVQQALLKMFEGTVISVP------RK--RSQNGLSHGCVEVDTTNILFICGGAFSDLGK 252
Query: 309 TISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
ISER GFG P+R +R L + SSL E +++ DL+AYGL PEFIGR PI+
Sbjct: 253 IISERLHHCPFGFGTPIRHELRDYALMNE--QSSLFEEIENDDLIAYGLTPEFIGRLPII 310
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
V L+ L EDQL+QV+ EPKNA+G+QYKK+F MN+VKLH T++ALRLIAKKA + TGARG
Sbjct: 311 VGLTHLTEDQLIQVIREPKNAIGKQYKKLFKMNDVKLHITENALRLIAKKASVRETGARG 370
Query: 429 LRALLENILTEAMFEIPET-KIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVL 487
LR++LE ILTEAMFEIP+ G + VLVD+E+VG+ GCGAKI +G LE +
Sbjct: 371 LRSILEGILTEAMFEIPDDGGEGQEKIIVVLVDEESVGTPTRQGCGAKIFRDNGALELYV 430
Query: 488 HE 489
++
Sbjct: 431 YQ 432
>gi|115465091|ref|NP_001056145.1| Os05g0533900 [Oryza sativa Japonica Group]
gi|48843829|gb|AAT47088.1| putative ATP-dependent Clp protease subunit clpX [Oryza sativa
Japonica Group]
gi|113579696|dbj|BAF18059.1| Os05g0533900 [Oryza sativa Japonica Group]
Length = 406
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/342 (60%), Positives = 267/342 (78%), Gaps = 3/342 (0%)
Query: 149 GNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGED 208
G+ ++ D+ +ELEKSN+LL+GPTGSGKTLLAKTLAR +VPF I DATA+TQAGY GED
Sbjct: 7 GDVSMSGDDDIELEKSNILLIGPTGSGKTLLAKTLARFADVPFVIADATAITQAGYSGED 66
Query: 209 AESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNGRDVSGEGVQQALLKMLEG 267
ES++ LLAAA F+VEA +RGIVYIDEVDK++K E + RDVSGEGVQ ALLK+ EG
Sbjct: 67 VESIICNLLAAAKFNVEATERGIVYIDEVDKLIKKVECNEDRRDVSGEGVQHALLKIFEG 126
Query: 268 TVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRA 327
TV+NVP N + + ++TK+ILFICGG+F GLEK +SER ++ +GFG P
Sbjct: 127 TVINVPRKRN--QDSISDGYVEVNTKNILFICGGSFSGLEKIVSERHRNCHMGFGLPTSG 184
Query: 328 NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPK 387
++R G T+A+ S +E+++S DL+AYGLIPEFIGR PI V L+ L+E QLVQVLMEPK
Sbjct: 185 DLRNCGWTNAIGESCCVEAIESDDLIAYGLIPEFIGRLPITVGLNDLSEAQLVQVLMEPK 244
Query: 388 NALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPET 447
NA+G+QYKK+F MN+VKLHFT++ALRLIAKKA ++ TGAR LR+++E+ILTEAMFEIP+
Sbjct: 245 NAIGKQYKKLFKMNDVKLHFTENALRLIAKKAASRETGARELRSIMEDILTEAMFEIPDA 304
Query: 448 KIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHE 489
+ G + AVLVD+E+VGSV + GCGAKI DG LE +++
Sbjct: 305 REGKEKIIAVLVDEESVGSVHSRGCGAKIFRDDGALELYVYQ 346
>gi|356533721|ref|XP_003535408.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent Clp protease
ATP-binding subunit ClpX-like [Glycine max]
Length = 399
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/273 (76%), Positives = 239/273 (87%), Gaps = 3/273 (1%)
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
L+ AA+F+V+AAQ+GI+YIDEVDKI K AES N RDVSGEGVQQALLKMLEGT+VNVP
Sbjct: 98 LIXAAEFNVQAAQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP- 156
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
+ G KHPRGDNI IDTK+ILFICGGAF+ LEKTISERRQDSSIGFGAPVR+NMR GG+
Sbjct: 157 -EKGAWKHPRGDNIXIDTKNILFICGGAFINLEKTISERRQDSSIGFGAPVRSNMRAGGI 215
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
T+A VTSSLLESV+S DL+AYGLIPE IG FPIL+SLSAL EDQL+QVL+EPKNAL +QY
Sbjct: 216 TNAAVTSSLLESVESADLIAYGLIPECIGXFPILISLSALTEDQLMQVLIEPKNALAKQY 275
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSV 454
KK+F+ NNVKLHFT+ A RLIAKKAMAK TGARGLRALLE+ILTEAM+EIP+ K G +
Sbjct: 276 KKLFNTNNVKLHFTEKAHRLIAKKAMAKKTGARGLRALLESILTEAMYEIPDVKAGDELI 335
Query: 455 NAVLVDKEAVGSVDAPGCGAKILHGDGELERVL 487
+AV+VD+E+VGSV+APGCG KIL GDG LE L
Sbjct: 336 DAVVVDEESVGSVNAPGCGGKILCGDGALELYL 368
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 31/54 (57%), Gaps = 15/54 (27%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYH 124
D PTPKEI KGLD+FVIGQ AKK AVYNHY+RIYH
Sbjct: 24 DFPTPKEIFKGLDKFVIGQHMAKKV---------------LSVAVYNHYQRIYH 62
>gi|449519729|ref|XP_004166887.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit
ClpX-like, partial [Cucumis sativus]
Length = 298
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/259 (77%), Positives = 233/259 (89%), Gaps = 7/259 (2%)
Query: 220 ADFDVEAAQRGIVYIDEVDKIVK-AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNG 278
A+F+VEAAQRGIVYIDEVDKI K +ES N+GRDVSGEGVQQALLKMLEGTVV+VP D G
Sbjct: 2 AEFNVEAAQRGIVYIDEVDKITKKSESLNSGRDVSGEGVQQALLKMLEGTVVDVP--DTG 59
Query: 279 PRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDAL 338
RKHPRGD I +DTK+ILFICGGAFVGLEK IS+R+ DSSIGFGAPVRA+MRTG LT+ L
Sbjct: 60 ARKHPRGDTIQMDTKNILFICGGAFVGLEKCISDRQHDSSIGFGAPVRASMRTGKLTEDL 119
Query: 339 VTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMF 398
V SS+LE+V+SGDL+ YGLIPEF+GR PILVSLSAL+EDQLVQVL +PKNALG+QYKKM
Sbjct: 120 VKSSMLENVESGDLITYGLIPEFVGRCPILVSLSALDEDQLVQVLTKPKNALGKQYKKML 179
Query: 399 SMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVL 458
MN+V+LHFT++ALR+IA+KAM KNTGARGLR++LENILTEAMFE+PE ++S+ AVL
Sbjct: 180 RMNDVELHFTENALRMIARKAMKKNTGARGLRSILENILTEAMFEVPE----SNSIKAVL 235
Query: 459 VDKEAVGSVDAPGCGAKIL 477
VD+EAVGSVDA GCGAK+L
Sbjct: 236 VDEEAVGSVDASGCGAKVL 254
>gi|389703170|ref|ZP_10185464.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter sp.
HA]
gi|388611573|gb|EIM40673.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter sp.
HA]
Length = 436
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/401 (51%), Positives = 267/401 (66%), Gaps = 49/401 (12%)
Query: 65 NSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYH 124
N N LP P EI LD++VIGQ+ AKK+ AVYNHYKR+
Sbjct: 53 NDWANRPLPKPHEIRAALDQYVIGQDVAKKT---------------LSVAVYNHYKRL-- 95
Query: 125 SSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLA 184
+ +G K+ D+ VE+ KSN+LL+GPTGSGKTLLA+TLA
Sbjct: 96 ---------------KVQTNGKKA-------DDSVEIAKSNILLVGPTGSGKTLLAQTLA 133
Query: 185 RIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KA 243
R+++VPF + DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+
Sbjct: 134 RLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKS 193
Query: 244 ESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAF 303
E+ + RDVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF
Sbjct: 194 ENPSITRDVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAF 251
Query: 304 VGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIG 363
GLEK + +R++ IGF A VR T L+D L V++ DLV +GLIPEFIG
Sbjct: 252 SGLEKIVQQRQEKGGIGFTAEVRNKEETKKLSD------LFRQVEATDLVKFGLIPEFIG 305
Query: 364 RFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKN 423
R P++ +L L+E+ L+Q+L EPKNAL RQYK +F M NV L F D ALR +AKKA+ +N
Sbjct: 306 RLPVIATLDELDEEALMQILTEPKNALTRQYKHLFDMENVDLVFEDSALRAVAKKALERN 365
Query: 424 TGARGLRALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
TGARGLR++LEN L E M+++P T +GT V+ +++ EA
Sbjct: 366 TGARGLRSILENSLLETMYDLPSRTDVGTVVVSEAVINGEA 406
>gi|225850860|ref|YP_002731094.1| ATP-dependent protease ATP-binding subunit ClpX [Persephonella
marina EX-H1]
gi|225645554|gb|ACO03740.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Persephonella
marina EX-H1]
Length = 411
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/401 (52%), Positives = 262/401 (65%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI K LDE+VIGQERAKK IL AVYNHYKRI+H
Sbjct: 58 LPTPAEIKKKLDEYVIGQERAKK-----IL----------SVAVYNHYKRIFHPGRY--- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
D+ VELEKSN+LL+GPTGSGKTLLA+TLA+I+NVPF
Sbjct: 100 -----------------------TDDDVELEKSNILLIGPTGSGKTLLARTLAKILNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNG-- 249
I DAT +T+AGYVGED ES+L +L+ AAD+D+E A++GI+YIDE+DKI K N
Sbjct: 137 AIADATNITEAGYVGEDVESILVRLVQAADYDIEKAEKGIIYIDEIDKIAKKSGENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV N IP G RKHP + I +DT +ILFI GGAFVGLE
Sbjct: 197 RDVSGEGVQQALLKILEGTVAN--IPPQGGRKHPHQEFIQLDTSNILFILGGAFVGLEDI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I +R SIGF +R+ G ++L V DL+ +GLIPEFIGR P++
Sbjct: 255 IKQRIGKKSIGFATQIRSKEEEEG--------NILSKVRVEDLIKFGLIPEFIGRIPVVA 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+ED LV+VL EPKNAL +QYKK+ SM+ V+L FTDDA+R IAK+A+ + TGARGL
Sbjct: 307 TLDELDEDALVRVLTEPKNALIKQYKKLLSMDGVELEFTDDAIRAIAKEAIDRKTGARGL 366
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA++E I+ + M+EIP+ + V V++DK+ V P
Sbjct: 367 RAIVEEIMLDVMYEIPQAQ----GVKKVVIDKDVVLKKKQP 403
>gi|357463949|ref|XP_003602256.1| LCR [Medicago truncatula]
gi|355491304|gb|AES72507.1| LCR [Medicago truncatula]
Length = 335
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/306 (67%), Positives = 250/306 (81%), Gaps = 8/306 (2%)
Query: 202 AGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNGRDVSGEGVQQA 260
AGYVGED ES+LYKLLAAAD++V AAQ+GIVYIDEVDKI K AES N RDVSGEGVQQA
Sbjct: 22 AGYVGEDVESILYKLLAAADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQA 81
Query: 261 LLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIG 320
LLKMLEGT+VNVP + G RKHPRGDNI IDTK+ILFICGGAF+ LEKTISERRQDSSIG
Sbjct: 82 LLKMLEGTIVNVP--EKGARKHPRGDNIQIDTKNILFICGGAFIDLEKTISERRQDSSIG 139
Query: 321 FGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLV 380
FGAPVRA M+ G +T+A + SSLL +V+S DL+AYGLIPEF+GRFPILVSLSAL E+QL+
Sbjct: 140 FGAPVRAKMKAGSVTEASIASSLLGTVESSDLIAYGLIPEFVGRFPILVSLSALTENQLI 199
Query: 381 QVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEA 440
QVL EPK+AL +QYKK F +N VKLHFT+ A + IA++AM+KNTGARGLRA++E+IL +A
Sbjct: 200 QVLTEPKSALEKQYKKTFQINGVKLHFTESARKSIARQAMSKNTGARGLRAIIESILVDA 259
Query: 441 MFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHETKSAHENDSEV 500
M+EIP+ + G ++AV+VD+++VG + GAKIL+G G +R L S +NDSE
Sbjct: 260 MYEIPDIRTGDDVIDAVVVDEDSVGG-EGSVRGAKILYGRGAFDRYL----SKEKNDSET 314
Query: 501 LLKSPG 506
S G
Sbjct: 315 TEVSGG 320
>gi|260432981|ref|ZP_05786952.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Silicibacter
lacuscaerulensis ITI-1157]
gi|260416809|gb|EEX10068.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Silicibacter
lacuscaerulensis ITI-1157]
Length = 422
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/416 (49%), Positives = 282/416 (67%), Gaps = 60/416 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPK+IC+ LD++VIGQ RAK+ AV+NHYKR+ H+
Sbjct: 63 VPTPKDICEVLDDYVIGQARAKRV---------------LSVAVHNHYKRLNHAQ----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G+ +EL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ---------------KAGS-------DIELSKSNILLIGPTGCGKTLLAQTLARILDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K+E+ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
++R + S++GFGA VR N G + + ++ DL+ +GLIPEF+GR P+L +
Sbjct: 259 AQRGKGSAMGFGADVRDNDERG-------VGEIFQDLEPEDLLKFGLIPEFVGRLPVLAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED LV +L +PKNAL +QY+++F + NV+L FT+DAL+ IAKKA+ + TGARGLR
Sbjct: 312 LEDLDEDALVTILTKPKNALVKQYQRLFELENVELDFTEDALKAIAKKAIERKTGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERV 486
++LE+IL + MFE+P G +V V+V++EAV S P I++ D E E V
Sbjct: 372 SILEDILLDTMFELP----GMKNVTKVVVNEEAVTSDAQP----LIIYADAEPETV 419
>gi|15606540|ref|NP_213920.1| ATP-dependent protease ATP-binding subunit ClpX [Aquifex aeolicus
VF5]
gi|6225162|sp|O67356.1|CLPX_AQUAE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|2983756|gb|AAC07316.1| ATP-dependent protease ATPase subunit clpX [Aquifex aeolicus VF5]
Length = 412
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/415 (51%), Positives = 274/415 (66%), Gaps = 58/415 (13%)
Query: 58 ENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYN 117
EN + N E D+P P++I K LDE+VIGQERAKK IL AVYN
Sbjct: 46 ENKKTSYNFELK-DIPKPEQIKKILDEYVIGQERAKK-----IL----------SVAVYN 89
Query: 118 HYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKT 177
HYKRI K+ + D+ VELEKSN+LL+GPTGSGKT
Sbjct: 90 HYKRI------------------------KAKEAGLSLDD-VELEKSNILLIGPTGSGKT 124
Query: 178 LLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEV 237
LLA+TLA+I+NVPF I DAT+LT+AGYVGED E+VL +LL A D+DV+AAQ+GIVYIDE+
Sbjct: 125 LLARTLAKILNVPFAIADATSLTEAGYVGEDVENVLVRLLQACDYDVKAAQKGIVYIDEI 184
Query: 238 DKIVKAESRNNG--RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDI 295
DKI K N RDVSGEGVQQALLK++EG+VVNVP P G RKHP + I +DT DI
Sbjct: 185 DKIAKKSGINPSITRDVSGEGVQQALLKIVEGSVVNVP-PQGG-RKHPHQEFIQVDTTDI 242
Query: 296 LFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAY 355
LFICGGAFVGLE I +R S +GF A ++ + LLE V+ DL+ +
Sbjct: 243 LFICGGAFVGLEDIIKQRLGKSRVGFEAEIKKVDK---------EQDLLELVEPDDLIRF 293
Query: 356 GLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLI 415
G+IPEFIGRFP++ +L L ED+LV++L+EPKNAL +QY+K+F + VKL FT+ ALR I
Sbjct: 294 GMIPEFIGRFPVIATLRELTEDELVRILVEPKNALVKQYQKLFELEGVKLTFTEKALREI 353
Query: 416 AKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
AK+A+ + TGARGLRA++E+I+ + MFE+P V V++D+ V + + P
Sbjct: 354 AKEAIRRKTGARGLRAIMEDIMADIMFEVP----SLPGVKEVIIDENVVKNKEKP 404
>gi|237755490|ref|ZP_04584112.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Sulfurihydrogenibium yellowstonense SS-5]
gi|237692354|gb|EEP61340.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Sulfurihydrogenibium yellowstonense SS-5]
Length = 408
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/410 (51%), Positives = 268/410 (65%), Gaps = 58/410 (14%)
Query: 63 NRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRI 122
N+ E +LPTP EI LDE+VIGQERAKK IL AVYNHYKRI
Sbjct: 47 NKKFENLSELPTPAEIKAKLDEYVIGQERAKK-----IL----------SVAVYNHYKRI 91
Query: 123 YHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKT 182
Y QKEL D+ VE+EKSN+LL+GPTGSGKTLLA+T
Sbjct: 92 Y----QKELF----------------------KDKDVEIEKSNILLIGPTGSGKTLLART 125
Query: 183 LARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK 242
LARI+NVPF I DAT +T+AGYVGED ES+L +LL AD+DVEAA++GIVYIDEVDKI K
Sbjct: 126 LARILNVPFAIADATNITEAGYVGEDVESILARLLQNADYDVEAAEKGIVYIDEVDKIAK 185
Query: 243 AESRNNG--RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICG 300
N RDVSGEGVQQALLK+LEGT+ NVP P G RKHP + I IDT +ILFI G
Sbjct: 186 KSGDNPSITRDVSGEGVQQALLKILEGTIANVP-PQGG-RKHPHQEFIQIDTTNILFILG 243
Query: 301 GAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPE 360
GAFVGLE I +R SIGFGA +++ LL V DL+ +GLIPE
Sbjct: 244 GAFVGLEDIIKQRIGKKSIGFGADIKSKSE---------EKDLLSLVQPEDLIKFGLIPE 294
Query: 361 FIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAM 420
F+GR P++ +L L+ED LV+VL EPKNAL +QYK + +++ ++L FT+DALR IA++A+
Sbjct: 295 FLGRIPVIATLEELDEDALVRVLTEPKNALIKQYKSLLAIDGIELEFTEDALRKIAREAI 354
Query: 421 AKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+ TGARGLRA++E+++ + M+E P K ++ V++DK+ V P
Sbjct: 355 KRKTGARGLRAIIEDLMLDVMYEAPNQK----TLKKVIIDKDVVLKQKPP 400
>gi|50083773|ref|YP_045283.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter sp.
ADP1]
gi|61211483|sp|Q6FEP7.1|CLPX_ACIAD RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|49529749|emb|CAG67461.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter sp.
ADP1]
Length = 436
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/395 (50%), Positives = 259/395 (65%), Gaps = 49/395 (12%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLP P EI LD++VIGQ+ AKK+ AVYNHYKR+
Sbjct: 59 DLPKPHEIRAALDQYVIGQDLAKKT---------------LSVAVYNHYKRL-------- 95
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
K+G + VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VP
Sbjct: 96 ----------------KAGQSGHVSKHEVEIAKSNILLIGPTGSGKTLLAQTLARLLDVP 139
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ +
Sbjct: 140 FAMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSIT 199
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK
Sbjct: 200 RDVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKI 257
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ +R + IGF A V+ T L + L V+ DLV +GLIPEFIGR P++
Sbjct: 258 VQQRHEKGGIGFNAEVKKKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIA 311
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+E L+Q+L EPKNAL RQY+ +F M NV L F + ALR IAKKA+ +NTGARGL
Sbjct: 312 TLEELDEAALMQILTEPKNALTRQYQSLFQMENVDLVFEESALRAIAKKALERNTGARGL 371
Query: 430 RALLENILTEAMFEIPETK-IGTSSVNAVLVDKEA 463
R+++EN+L E M+++P K IGT VN ++ EA
Sbjct: 372 RSIMENVLLETMYDLPSRKDIGTVVVNEAVIRGEA 406
>gi|262374980|ref|ZP_06068214.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
lwoffii SH145]
gi|262309993|gb|EEY91122.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
lwoffii SH145]
Length = 436
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/401 (50%), Positives = 264/401 (65%), Gaps = 49/401 (12%)
Query: 65 NSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYH 124
N N LP P EI LD++VIGQ+ AKK+ AVYNHYKR+
Sbjct: 53 NDWANRPLPKPHEIRAALDQYVIGQDVAKKT---------------LSVAVYNHYKRL-- 95
Query: 125 SSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLA 184
K N + D+ VEL KSN++L+GPTGSGKTLLA+TLA
Sbjct: 96 ----------------------KVQNNGKKADDSVELSKSNIMLVGPTGSGKTLLAQTLA 133
Query: 185 RIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KA 243
R+++VPF + DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+
Sbjct: 134 RLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKS 193
Query: 244 ESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAF 303
E+ + RDVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF
Sbjct: 194 ENPSITRDVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAF 251
Query: 304 VGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIG 363
GLEK + +R++ IGF A VR T L+D L V++ DLV +GLIPEFIG
Sbjct: 252 SGLEKIVQQRQEKGGIGFTAEVRKKDETKKLSD------LFRQVEATDLVKFGLIPEFIG 305
Query: 364 RFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKN 423
R P++ +L L+E+ L+Q+L EPKNAL RQY+ +F M +V L F + ALR +AKKA+ +N
Sbjct: 306 RLPVIATLDELDEEALMQILTEPKNALTRQYQHLFDMEDVDLVFEESALRAVAKKAVERN 365
Query: 424 TGARGLRALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
TGARGLR++LEN L E M+++P + +GT +N ++ EA
Sbjct: 366 TGARGLRSILENSLLETMYDLPSRSDVGTVVINEAVIKGEA 406
>gi|225848211|ref|YP_002728374.1| ATP-dependent protease ATP-binding subunit ClpX
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225643885|gb|ACN98935.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 405
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/404 (51%), Positives = 266/404 (65%), Gaps = 58/404 (14%)
Query: 63 NRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRI 122
N+ EG LPTP EI LDE+VIGQE+AKK IL AVYNHYKRI
Sbjct: 44 NKKFEGLSQLPTPAEIKAKLDEYVIGQEKAKK-----IL----------SVAVYNHYKRI 88
Query: 123 YHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKT 182
Y L K +GV E+EKSN+LL+GPTGSGKTLLA+T
Sbjct: 89 YQKDLFK-------------NTGV-------------EVEKSNILLIGPTGSGKTLLART 122
Query: 183 LARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK 242
LARI+NVPF I DAT +T+AGYVGED ES+L +LL AD+DVEAA++GIVYIDEVDKI K
Sbjct: 123 LARILNVPFAIADATNITEAGYVGEDVESILARLLQNADYDVEAAEKGIVYIDEVDKIAK 182
Query: 243 AESRNNG--RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICG 300
N RDVSGEGVQQALLK+LEGT+ NVP P G RKHP + I IDT +ILFI G
Sbjct: 183 KSGDNPSITRDVSGEGVQQALLKILEGTIANVP-PQGG-RKHPHQEFIQIDTTNILFILG 240
Query: 301 GAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPE 360
GAFVGLE I +R +IGFGA +++ G LLE V DL+ +GLIPE
Sbjct: 241 GAFVGLEDIIRQRLGKKAIGFGAEIKSKKEEG---------DLLEQVQPEDLIKFGLIPE 291
Query: 361 FIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAM 420
F+GR P++ +L L+ED LV+VL EPKNAL +QY+ + +++ + L FT+DALR IA++A+
Sbjct: 292 FLGRIPVIATLKELDEDMLVRVLTEPKNALIKQYQALLAVDGIDLEFTEDALREIAREAI 351
Query: 421 AKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+ TGARGLRA++E+I+ + M+E P K ++ V++DK+ V
Sbjct: 352 KRKTGARGLRAIIEDIMLDIMYEAPNQK----TLKKVVIDKDVV 391
>gi|386828605|ref|ZP_10115712.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Beggiatoa
alba B18LD]
gi|386429489|gb|EIJ43317.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Beggiatoa
alba B18LD]
Length = 427
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/416 (49%), Positives = 270/416 (64%), Gaps = 59/416 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI + LDE+VIGQE AKK AVYNHYKR+
Sbjct: 67 LPTPHEIHQHLDEYVIGQEHAKKV---------------LSVAVYNHYKRV--------- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N +N+ VE+ KSN+LL+GPTGSGKTLLA+TLAR +NVPF
Sbjct: 103 ----------------ETQLNKKNE--VEIAKSNILLIGPTGSGKTLLAETLARFLNVPF 144
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQ GI+YIDE+DKI K+++ + R
Sbjct: 145 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQTGIIYIDEIDKISRKSDNPSITR 204
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT ++LFICGGAF GLEK I
Sbjct: 205 DVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTTNMLFICGGAFAGLEKVI 262
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R + S IGF A VR+N +T+ LL V+ DL+ YGLIPEFIGR PI+ +
Sbjct: 263 RARSEKSGIGFSAEVRSNDDKRNITE------LLHGVEPEDLIKYGLIPEFIGRLPIITT 316
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L E+QLV++L+EPKNAL +QY K+F M KL F D+ L+ IA+KA+A+NTGARGLR
Sbjct: 317 LEELTEEQLVKILVEPKNALTKQYIKLFEMEGAKLEFRDEVLKAIARKALARNTGARGLR 376
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERV 486
++LENIL E M+++P +V V+VD+ + P IL+ + E +RV
Sbjct: 377 SILENILLETMYDLP----SMENVAKVIVDETVIEGESKP----LILYKNTEKQRV 424
>gi|188996269|ref|YP_001930520.1| ATP-dependent protease ATP-binding subunit ClpX
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188931336|gb|ACD65966.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 408
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/410 (51%), Positives = 267/410 (65%), Gaps = 58/410 (14%)
Query: 63 NRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRI 122
N+ E LPTP EI LDE+VIGQE+AKK IL AVYNHYKRI
Sbjct: 47 NKKFENLSKLPTPAEIKAKLDEYVIGQEKAKK-----IL----------SVAVYNHYKRI 91
Query: 123 YHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKT 182
Y QKEL D+ VE+EKSN+LL+GPTGSGKTLLA+T
Sbjct: 92 Y----QKELF----------------------KDKDVEIEKSNILLIGPTGSGKTLLART 125
Query: 183 LARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK 242
LARI+NVPF I DAT +T+AGYVGED ES+L +LL AD+DVEAA++GIVYIDEVDKI K
Sbjct: 126 LARILNVPFAIADATNITEAGYVGEDVESILARLLQNADYDVEAAEKGIVYIDEVDKIAK 185
Query: 243 AESRNNG--RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICG 300
N RDVSGEGVQQALLK+LEGT+ NVP P G RKHP + I IDT +ILFI G
Sbjct: 186 KSGDNPSITRDVSGEGVQQALLKILEGTIANVP-PQGG-RKHPHQEFIQIDTTNILFILG 243
Query: 301 GAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPE 360
GAFVGLE I +R SIGFGA +++ LL V DL+ +GLIPE
Sbjct: 244 GAFVGLEDIIKQRIGKKSIGFGADIKSKSE---------EKELLSLVQPEDLIKFGLIPE 294
Query: 361 FIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAM 420
F+GR P++ +L L+ED LV+VL EPKNAL +QYK + +++ ++L FT+DALR IA++A+
Sbjct: 295 FLGRIPVIATLEELDEDALVRVLTEPKNALIKQYKSLLAIDGIELEFTEDALREIAREAI 354
Query: 421 AKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+ TGARGLRA++E+++ + M+E P K ++ V++DK+ V P
Sbjct: 355 KRKTGARGLRAIIEDLMLDVMYEAPNQK----TLKKVIIDKDVVLKQKPP 400
>gi|445423514|ref|ZP_21436679.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
sp. WC-743]
gi|444755551|gb|ELW80131.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
sp. WC-743]
Length = 436
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/395 (50%), Positives = 263/395 (66%), Gaps = 49/395 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+ S
Sbjct: 60 LPKPHEIRAALDQYVIGQDTAKKT---------------LSVAVYNHYKRLKVSQ----- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+G K + VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 100 ------------TGHKPKDA-------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 141 AMADATTLTEAGYVGEDVENIIQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I +DT +ILFICGGAF GLEK +
Sbjct: 201 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQVDTANILFICGGAFSGLEKVV 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ D S L V++ DLV +GLIPEFIGR P++ +
Sbjct: 259 QQRQEKGGIGFTADVKNK------DDTKKVSELFRQVEAADLVKFGLIPEFIGRLPVIAT 312
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F M NV L F D ALR IAKKA+ +NTGARGLR
Sbjct: 313 LEELDEEALMQILTEPKNALTRQYQYLFEMENVDLLFEDSALRAIAKKALERNTGARGLR 372
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEAV 464
++LEN+L E M+++P + IGT +N +++ +AV
Sbjct: 373 SILENVLLETMYDLPSRSDIGTVIINEAVINDKAV 407
>gi|403051410|ref|ZP_10905894.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
bereziniae LMG 1003]
Length = 436
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/395 (50%), Positives = 263/395 (66%), Gaps = 49/395 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+ S
Sbjct: 60 LPKPHEIRAALDQYVIGQDTAKKT---------------LSVAVYNHYKRLKVSQ----- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+G K + VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 100 ------------TGHKPKDA-------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 141 AMADATTLTEAGYVGEDVENIIQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I +DT +ILFICGGAF GLEK +
Sbjct: 201 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQVDTANILFICGGAFSGLEKVV 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ D S L V++ DLV +GLIPEFIGR P++ +
Sbjct: 259 QQRQEKGGIGFTADVKNK------DDTKKVSELFRQVEAADLVKFGLIPEFIGRLPVIAT 312
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F M NV L F D ALR IAKKA+ +NTGARGLR
Sbjct: 313 LEELDEEALMQILTEPKNALTRQYQYLFEMENVDLLFEDSALRAIAKKALERNTGARGLR 372
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEAV 464
++LEN+L E M+++P + IGT +N +++ +AV
Sbjct: 373 SILENVLLETMYDLPSRSDIGTVIINEAVINDKAV 407
>gi|365174863|ref|ZP_09362301.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Synergistes
sp. 3_1_syn1]
gi|363613728|gb|EHL65233.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Synergistes
sp. 3_1_syn1]
Length = 440
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/421 (48%), Positives = 277/421 (65%), Gaps = 55/421 (13%)
Query: 52 ESESETENGNRNRNSEGNID-LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIG 110
E E + + + S +ID LP P EI + LD++VIGQ +AKK
Sbjct: 61 EPEQSQKKQSPDYTSLPSIDKLPKPAEIKEFLDQYVIGQAQAKKV--------------- 105
Query: 111 ACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMG 170
AVYNHYKR+ + ++ D+ VEL KSNVLL+G
Sbjct: 106 LSVAVYNHYKRLLNPAV---------------------------GDDDVELPKSNVLLVG 138
Query: 171 PTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRG 230
PTGSGKTLLA+TLA++++VPF +TDAT LT+AGYVGED E++L +LL AADFD++AA+RG
Sbjct: 139 PTGSGKTLLAQTLAKMLHVPFAMTDATTLTEAGYVGEDVENILLRLLQAADFDIQAAERG 198
Query: 231 IVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIP 289
I+YIDE+DKI K+ES + RDVSGEGVQQALLK++EGTV N IP G RKHP + IP
Sbjct: 199 IIYIDEIDKIARKSESTSITRDVSGEGVQQALLKIIEGTVAN--IPPKGGRKHPSQEMIP 256
Query: 290 IDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDS 349
IDT +ILFICGGAF GLEK IS+R + +GFG + +N+ ++ LL+ ++
Sbjct: 257 IDTSNILFICGGAFDGLEKIISQRTNEKQLGFGGEISSNVSKRS------SAELLKKLEP 310
Query: 350 GDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTD 409
DL +YG IPEFIGR P+LV+L +L+ED LV++L EPKNA +QYKK+F++ ++ L FTD
Sbjct: 311 DDLRSYGFIPEFIGRLPVLVALESLSEDALVRILKEPKNAPLKQYKKLFALEDIDLEFTD 370
Query: 410 DALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDA 469
DA+R IA++A NTGARGLR +LE ++ + +EIP +S+V ++ V K AV +
Sbjct: 371 DAVRTIAERAAKLNTGARGLRTILERLMLDLQYEIPNK---SSNVASLTVTKGAVEGTEK 427
Query: 470 P 470
P
Sbjct: 428 P 428
>gi|308446478|ref|XP_003087188.1| hypothetical protein CRE_23295 [Caenorhabditis remanei]
gi|308260041|gb|EFP03994.1| hypothetical protein CRE_23295 [Caenorhabditis remanei]
Length = 436
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/427 (48%), Positives = 278/427 (65%), Gaps = 55/427 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+ S
Sbjct: 60 LPKPHEIRAALDQYVIGQDTAKKT---------------LSVAVYNHYKRLKVSQ----- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+G K + VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 100 ------------TGHKPKDA-------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 141 AMADATTLTEAGYVGEDVENIIQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I +DT +ILFICGGAF GLEK +
Sbjct: 201 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQVDTANILFICGGAFSGLEKVV 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ D+ S L V++ DLV +GLIPEFIGR P++ +
Sbjct: 259 QQRQEKGGIGFTANVKNK------DDSKKVSELFRQVEAADLVKFGLIPEFIGRLPVIAT 312
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+++ L+Q+L EPKNAL RQY+ +F M NV L F D ALR IAKKA+ +NTGARGLR
Sbjct: 313 LEELDQEALMQILTEPKNALTRQYQYLFEMENVDLLFEDSALRAIAKKALERNTGARGLR 372
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERV--- 486
++LEN+L E M+++P + IGT +N +++ +A + + H + E+E+V
Sbjct: 373 SILENVLLETMYDLPSRSDIGTVIINEAVINDKAAPEFKSE---RQPKHENTEVEKVDLK 429
Query: 487 LHETKSA 493
+ +TKSA
Sbjct: 430 VLDTKSA 436
>gi|169634425|ref|YP_001708161.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii SDF]
gi|169797266|ref|YP_001715059.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AYE]
gi|184156808|ref|YP_001845147.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ACICU]
gi|213155940|ref|YP_002317985.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB0057]
gi|215484707|ref|YP_002326942.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii AB307-0294]
gi|239500789|ref|ZP_04660099.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB900]
gi|260556148|ref|ZP_05828367.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|301346761|ref|ZP_07227502.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB056]
gi|301512253|ref|ZP_07237490.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB058]
gi|301594242|ref|ZP_07239250.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB059]
gi|332851227|ref|ZP_08433300.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii 6013150]
gi|332866081|ref|ZP_08436809.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii 6013113]
gi|332873221|ref|ZP_08441178.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii 6014059]
gi|384130480|ref|YP_005513092.1| clpX [Acinetobacter baumannii 1656-2]
gi|384141765|ref|YP_005524475.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii MDR-ZJ06]
gi|385236077|ref|YP_005797416.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii TCDC-AB0715]
gi|387125277|ref|YP_006291159.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Acinetobacter baumannii MDR-TJ]
gi|403673395|ref|ZP_10935692.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter sp.
NCTC 10304]
gi|407931413|ref|YP_006847056.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Acinetobacter baumannii TYTH-1]
gi|416146585|ref|ZP_11601248.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB210]
gi|417548860|ref|ZP_12199941.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-18]
gi|417554476|ref|ZP_12205545.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-81]
gi|417559835|ref|ZP_12210714.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC137]
gi|417566510|ref|ZP_12217382.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC143]
gi|417570410|ref|ZP_12221267.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC189]
gi|417571823|ref|ZP_12222677.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Canada BC-5]
gi|417577372|ref|ZP_12228217.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-17]
gi|417871121|ref|ZP_12516064.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH1]
gi|417875783|ref|ZP_12520587.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH2]
gi|417879719|ref|ZP_12524275.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH3]
gi|417882117|ref|ZP_12526425.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH4]
gi|421201042|ref|ZP_15658201.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC109]
gi|421202631|ref|ZP_15659779.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AC12]
gi|421454197|ref|ZP_15903546.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-123]
gi|421533665|ref|ZP_15979946.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AC30]
gi|421625769|ref|ZP_16066615.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC098]
gi|421630631|ref|ZP_16071332.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC180]
gi|421634255|ref|ZP_16074874.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-13]
gi|421642783|ref|ZP_16083294.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-235]
gi|421649346|ref|ZP_16089741.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-251]
gi|421650920|ref|ZP_16091292.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC0162]
gi|421655156|ref|ZP_16095480.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-72]
gi|421659274|ref|ZP_16099495.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-83]
gi|421675826|ref|ZP_16115745.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC065]
gi|421677460|ref|ZP_16117352.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC111]
gi|421688455|ref|ZP_16128155.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-143]
gi|421692612|ref|ZP_16132263.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-116]
gi|421698050|ref|ZP_16137594.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-58]
gi|421702212|ref|ZP_16141697.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ZWS1122]
gi|421705951|ref|ZP_16145372.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ZWS1219]
gi|421789232|ref|ZP_16225494.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-82]
gi|421792386|ref|ZP_16228541.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-2]
gi|421798248|ref|ZP_16234273.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-21]
gi|421798785|ref|ZP_16234796.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Canada BC1]
gi|421805852|ref|ZP_16241728.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-A-694]
gi|421807882|ref|ZP_16243739.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC035]
gi|424053764|ref|ZP_17791295.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
baumannii Ab11111]
gi|424061208|ref|ZP_17798698.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
baumannii Ab33333]
gi|424064699|ref|ZP_17802183.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
baumannii Ab44444]
gi|425749276|ref|ZP_18867256.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-348]
gi|425751578|ref|ZP_18869523.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-113]
gi|445400104|ref|ZP_21429754.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-57]
gi|445446824|ref|ZP_21443455.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-A-92]
gi|445465207|ref|ZP_21449985.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC338]
gi|445481642|ref|ZP_21456086.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-78]
gi|445486129|ref|ZP_21457187.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii AA-014]
gi|226706570|sp|B7H092.1|CLPX_ACIB3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706571|sp|B7I5E4.1|CLPX_ACIB5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238685491|sp|A3M1Y8.2|CLPX_ACIBT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238688025|sp|B0V4T7.1|CLPX_ACIBY RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238688111|sp|B0VKU4.1|CLPX_ACIBS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238691033|sp|B2I3C2.1|CLPX_ACIBC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|169150193|emb|CAM88087.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter
baumannii AYE]
gi|169153217|emb|CAP02313.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter
baumannii]
gi|183208402|gb|ACC55800.1| ATP-dependent protease Clp, ATPase subunit [Acinetobacter baumannii
ACICU]
gi|193076290|gb|ABO10932.2| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter
baumannii ATCC 17978]
gi|213055100|gb|ACJ40002.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii AB0057]
gi|213988694|gb|ACJ58993.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii AB307-0294]
gi|260410203|gb|EEX03502.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|322506700|gb|ADX02154.1| clpX [Acinetobacter baumannii 1656-2]
gi|323516574|gb|ADX90955.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii TCDC-AB0715]
gi|332730107|gb|EGJ61434.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii 6013150]
gi|332734827|gb|EGJ65920.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii 6013113]
gi|332738733|gb|EGJ69603.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii 6014059]
gi|333365966|gb|EGK47980.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB210]
gi|342224855|gb|EGT89870.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH2]
gi|342225942|gb|EGT90918.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH1]
gi|342227605|gb|EGT92524.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH3]
gi|342238366|gb|EGU02799.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH4]
gi|347592258|gb|AEP04979.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii MDR-ZJ06]
gi|385879769|gb|AFI96864.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Acinetobacter baumannii MDR-TJ]
gi|395522417|gb|EJG10506.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC137]
gi|395550858|gb|EJG16867.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC189]
gi|395552182|gb|EJG18190.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC143]
gi|395563074|gb|EJG24727.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC109]
gi|395570593|gb|EJG31255.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-17]
gi|398328014|gb|EJN44144.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AC12]
gi|400207391|gb|EJO38361.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Canada BC-5]
gi|400212964|gb|EJO43921.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-123]
gi|400389159|gb|EJP52231.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-18]
gi|400390893|gb|EJP57940.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-81]
gi|404559898|gb|EKA65149.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-116]
gi|404561198|gb|EKA66434.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-143]
gi|404573096|gb|EKA78136.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-58]
gi|404666890|gb|EKB34820.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
baumannii Ab33333]
gi|404667250|gb|EKB35171.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
baumannii Ab11111]
gi|404672782|gb|EKB40586.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
baumannii Ab44444]
gi|407194975|gb|EKE66111.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ZWS1122]
gi|407195364|gb|EKE66498.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ZWS1219]
gi|407899994|gb|AFU36825.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Acinetobacter baumannii TYTH-1]
gi|408508932|gb|EKK10608.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC0162]
gi|408509293|gb|EKK10968.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-72]
gi|408511349|gb|EKK12997.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-235]
gi|408514119|gb|EKK15731.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-251]
gi|408697017|gb|EKL42537.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC180]
gi|408697863|gb|EKL43369.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC098]
gi|408704973|gb|EKL50329.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-13]
gi|408707985|gb|EKL53263.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-83]
gi|409988337|gb|EKO44509.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AC30]
gi|410381343|gb|EKP33909.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC065]
gi|410393216|gb|EKP45570.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC111]
gi|410394834|gb|EKP47158.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-21]
gi|410399162|gb|EKP51359.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-82]
gi|410400693|gb|EKP52861.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-2]
gi|410408114|gb|EKP60089.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-A-694]
gi|410411434|gb|EKP63305.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Canada BC1]
gi|410416061|gb|EKP67836.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC035]
gi|425489349|gb|EKU55661.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-348]
gi|425500025|gb|EKU66053.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-113]
gi|444759766|gb|ELW84228.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-A-92]
gi|444769614|gb|ELW93782.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii AA-014]
gi|444770434|gb|ELW94591.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-78]
gi|444779339|gb|ELX03333.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC338]
gi|444783486|gb|ELX07345.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-57]
gi|452955760|gb|EME61157.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii MSP4-16]
Length = 437
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/394 (50%), Positives = 263/394 (66%), Gaps = 50/394 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+ K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKT---------------LSVAVYNHYKRL------KVG 98
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
S H+ D VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 99 QSGHVSKD-------------------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 140 AMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK +
Sbjct: 200 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIV 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ T L + L V+ DLV +GLIPEFIGR P++ +
Sbjct: 258 QQRQEKGGIGFTADVKNKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F+M NV L F D ALR +AK+A+ +NTGARGLR
Sbjct: 312 LEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLR 371
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
++LEN+L E M+++P T +GT +N +++ EA
Sbjct: 372 SILENVLLETMYDLPSRTDVGTVFINEAVINGEA 405
>gi|445458101|ref|ZP_21446925.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC047]
gi|444775745|gb|ELW99801.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC047]
Length = 437
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/394 (50%), Positives = 263/394 (66%), Gaps = 50/394 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+ K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKT---------------LSVAVYNHYKRL------KVG 98
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
S H+ D VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 99 QSGHVSKD-------------------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 140 AMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK +
Sbjct: 200 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIV 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ T L + L V+ DLV +GLIPEFIGR P++ +
Sbjct: 258 QQRQEKGGIGFTADVKNKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F+M NV L F D ALR +AK+A+ +NTGARGLR
Sbjct: 312 LEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLR 371
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
++LEN+L E M+++P T +GT +N +++ EA
Sbjct: 372 SILENVLLETMYDLPSRTDVGTVFINEAVINGEA 405
>gi|417545335|ref|ZP_12196421.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC032]
gi|421666371|ref|ZP_16106463.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC087]
gi|421671117|ref|ZP_16111099.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC099]
gi|400383223|gb|EJP41901.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC032]
gi|410383414|gb|EKP35947.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC099]
gi|410388296|gb|EKP40735.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC087]
Length = 437
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/394 (50%), Positives = 263/394 (66%), Gaps = 50/394 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+ K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKT---------------LSVAVYNHYKRL------KVG 98
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
S H+ D VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 99 QSGHVSKD-------------------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 140 AMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK +
Sbjct: 200 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIV 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ T L + L V+ DLV +GLIPEFIGR P++ +
Sbjct: 258 QQRQEKGGIGFTADVKNKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F+M NV L F D ALR +AK+A+ +NTGARGLR
Sbjct: 312 LEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLR 371
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
++LEN+L E M+++P T +GT +N +++ EA
Sbjct: 372 SILENVLLETMYDLPSRTDVGTVFINEAVINGEA 405
>gi|262280903|ref|ZP_06058686.1| ATP-dependent protease Clp [Acinetobacter calcoaceticus RUH2202]
gi|262257803|gb|EEY76538.1| ATP-dependent protease Clp [Acinetobacter calcoaceticus RUH2202]
Length = 437
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/395 (50%), Positives = 264/395 (66%), Gaps = 52/395 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKT---------------LSVAVYNHYKRL--------- 95
Query: 132 VSDHLYVDSILGSGVKSG-NCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
K G N +V + VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VP
Sbjct: 96 ---------------KVGHNGHVSKE--VEIAKSNILLIGPTGSGKTLLAQTLARLLDVP 138
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ +
Sbjct: 139 FAMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSIT 198
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK
Sbjct: 199 RDVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFSGLEKI 256
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ +R++ IGF A V+ T L + L V+ DLV +GLIPEFIGR P++
Sbjct: 257 VQQRQEKGGIGFTADVKNKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIA 310
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+E+ L+Q+L EPKNAL RQY+ +F+M NV L F D ALR IAKKA+ +NTGARGL
Sbjct: 311 TLEELDEEALMQILTEPKNALTRQYQYLFTMENVDLIFEDSALRAIAKKALERNTGARGL 370
Query: 430 RALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
R+++EN+L E M+++P T +GT +N +++ EA
Sbjct: 371 RSIMENVLLETMYDLPSRTDVGTVIINEAVINGEA 405
>gi|424743169|ref|ZP_18171482.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-141]
gi|422943430|gb|EKU38446.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-141]
Length = 437
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/395 (50%), Positives = 264/395 (66%), Gaps = 52/395 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKT---------------LSVAVYNHYKRL--------- 95
Query: 132 VSDHLYVDSILGSGVKSG-NCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
K G N +V + VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VP
Sbjct: 96 ---------------KVGHNGHVSKE--VEIAKSNILLIGPTGSGKTLLAQTLARLLDVP 138
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ +
Sbjct: 139 FAMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSIT 198
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK
Sbjct: 199 RDVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFSGLEKI 256
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ +R++ IGF A V+ T L + L V+ DLV +GLIPEFIGR P++
Sbjct: 257 VQQRQEKGGIGFTADVKNKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIA 310
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+E+ L+Q+L EPKNAL RQY+ +F+M NV L F D ALR IAKKA+ +NTGARGL
Sbjct: 311 TLEELDEEALMQILTEPKNALTRQYQYLFTMENVDLIFEDSALRAIAKKALERNTGARGL 370
Query: 430 RALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
R+++EN+L E M+++P T +GT +N +++ EA
Sbjct: 371 RSIMENVLLETMYDLPSRTDVGTVIINEAVINGEA 405
>gi|299771639|ref|YP_003733665.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
oleivorans DR1]
gi|298701727|gb|ADI92292.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
oleivorans DR1]
Length = 437
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/395 (50%), Positives = 264/395 (66%), Gaps = 52/395 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKT---------------LSVAVYNHYKRL--------- 95
Query: 132 VSDHLYVDSILGSGVKSG-NCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
K G N +V + VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VP
Sbjct: 96 ---------------KVGHNGHVSKE--VEIAKSNILLIGPTGSGKTLLAQTLARLLDVP 138
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ +
Sbjct: 139 FAMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSIT 198
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK
Sbjct: 199 RDVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFSGLEKI 256
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ +R++ IGF A V+ T L + L V+ DLV +GLIPEFIGR P++
Sbjct: 257 VQQRQEKGGIGFTADVKNKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIA 310
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+E+ L+Q+L EPKNAL RQY+ +F+M NV L F D ALR IAKKA+ +NTGARGL
Sbjct: 311 TLEELDEEALMQILTEPKNALTRQYQYLFTMENVDLIFEDSALRAIAKKALERNTGARGL 370
Query: 430 RALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
R+++EN+L E M+++P T +GT +N +++ EA
Sbjct: 371 RSIMENVLLETMYDLPSRTDVGTVIINEAVINGEA 405
>gi|359428059|ref|ZP_09219101.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
sp. NBRC 100985]
gi|358236510|dbj|GAB00640.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
sp. NBRC 100985]
Length = 436
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/417 (49%), Positives = 269/417 (64%), Gaps = 55/417 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+
Sbjct: 60 LPKPHEIRAALDQYVIGQDVAKKT---------------LSVAVYNHYKRL--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G N EI E+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 96 ---------------KVGQSQHGNPEI-EIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 140 AMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK +
Sbjct: 200 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTANILFICGGAFSGLEKIV 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ D+ S L V++ DLV +GLIPEFIGR P++ +
Sbjct: 258 QQRQEKGGIGFTADVKNK------DDSKKVSELFRQVEATDLVKFGLIPEFIGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +FSM +V L F D ALR +AKKA+ +NTGARGLR
Sbjct: 312 LEELDEEALMQILTEPKNALTRQYQYLFSMEDVDLVFDDSALRAVAKKALERNTGARGLR 371
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERV 486
++LEN+L E M+++P T +GT V+VD+ + P A+ L G E V
Sbjct: 372 SILENVLLETMYDLPSRTDVGT-----VIVDEAVINGTAKPTFKAERLPQTGTPELV 423
>gi|421662138|ref|ZP_16102306.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC110]
gi|421693925|ref|ZP_16133557.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-692]
gi|404569764|gb|EKA74849.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-692]
gi|408714941|gb|EKL60071.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC110]
Length = 437
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/394 (50%), Positives = 263/394 (66%), Gaps = 50/394 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKT---------------LSVAVYNHYKRL--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ SG S + VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 96 --------KVGQSGHASKD--------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 140 AMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK +
Sbjct: 200 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIV 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ T L + L V+ DLV +GLIPEFIGR P++ +
Sbjct: 258 QQRQEKGGIGFTADVKNKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F+M NV L F D ALR +AK+A+ +NTGARGLR
Sbjct: 312 LEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLR 371
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
++LEN+L E M+++P T +GT +N +++ EA
Sbjct: 372 SILENVLLETMYDLPSRTDVGTVFINEAVINGEA 405
>gi|302390302|ref|YP_003826123.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermosediminibacter oceani DSM 16646]
gi|302200930|gb|ADL08500.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermosediminibacter oceani DSM 16646]
Length = 421
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 271/401 (67%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
++P P EI + LD++VIGQE+AKK IL AVYNHYKRI
Sbjct: 60 NIPKPSEIKEILDQYVIGQEKAKK-----IL----------SVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N +V+ D+ VEL+KSN++++GPTGSGKTLLA+TLA+I+NVP
Sbjct: 97 -------------------NSSVKTDD-VELQKSNIIMLGPTGSGKTLLAQTLAKILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A++GIVYIDE+DKI K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ +VP P G RKHP + I IDT +ILFICGGAF G+EK
Sbjct: 197 RDVSGEGVQQALLKILEGTIASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFEGIEKI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I+ R SIGFGA +R+ LL + DL+ +G+IPEF+GR PI+V
Sbjct: 255 IANRIGKKSIGFGAEIRSKEEKN-------VGELLSQIMPEDLLKFGMIPEFVGRVPIIV 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+E L+++L EPKNAL +QY+K+F M+NV+L FTD+AL++IA++A+ + TGARGL
Sbjct: 308 TLDALDEQALIRILKEPKNALVKQYQKLFEMDNVQLEFTDEALQVIAQEALNRKTGARGL 367
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA+LE ++ + M+EIP S + +V KE V + P
Sbjct: 368 RAILEEVMMDVMYEIP----SRSDITKCVVTKEVVLKREEP 404
>gi|372279705|ref|ZP_09515741.1| ATP-dependent protease ATP-binding subunit ClpX [Oceanicola sp.
S124]
Length = 421
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/436 (47%), Positives = 287/436 (65%), Gaps = 72/436 (16%)
Query: 36 EIMGGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKS 95
E+ IR++ +S G++S SEG +PTPKEIC LD++VIGQ AK+
Sbjct: 42 ELCMDIIREETKSTGLKS------------SEG---VPTPKEICAVLDDYVIGQATAKRV 86
Query: 96 HIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEN 155
AV+NHYKR+ HS+ K G+
Sbjct: 87 ---------------LSVAVHNHYKRLNHSA--------------------KGGD----- 106
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
+EL KSN+LL+GPTG GKTLLA+TLARI++VPFT+ DAT LT+AGYVGED E+++ K
Sbjct: 107 ---IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILK 163
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
LL +++++VE AQRGIVYIDEVDKI K+E+ + RDVSGEGVQQALLK++EGTV +VP
Sbjct: 164 LLQSSEYNVEKAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVP- 222
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
P G RKHP+ + + +DT +ILFICGGAF GL+K I+ R + S++GFGA VR N
Sbjct: 223 PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKIIAARGKGSAMGFGADVRDN------ 275
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
DA + + ++ DL+ +GLIPEF+GR P+L +L L+ + LV +L EPKNAL +QY
Sbjct: 276 -DARGVGEIFQDLEPEDLLKFGLIPEFVGRLPVLATLEDLDAEALVTILTEPKNALVKQY 334
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSV 454
+++F + +V+L FTDDAL+ IAK+A+ + TGARGLR++LE+IL + MFE+P G V
Sbjct: 335 QRLFELEDVELTFTDDALQSIAKRAIERKTGARGLRSILEDILLDTMFELP----GMDDV 390
Query: 455 NAVLVDKEAVGSVDAP 470
V+V++EAV + AP
Sbjct: 391 TEVVVNEEAVTADAAP 406
>gi|358012228|ref|ZP_09144038.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter sp.
P8-3-8]
Length = 436
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/394 (50%), Positives = 263/394 (66%), Gaps = 49/394 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+ S
Sbjct: 60 LPKPHEIRAALDQYVIGQDTAKKT---------------LSVAVYNHYKRLKVSQ----- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+G K + VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 100 ------------TGHKPADA-------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 141 AMADATTLTEAGYVGEDVENIIQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I +DT +ILFICGGAF GLEK +
Sbjct: 201 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQVDTANILFICGGAFSGLEKVV 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ D+ S L V++ DLV +GLIPEFIGR P++ +
Sbjct: 259 QQRQEKGGIGFTADVKNK------DDSKKLSELFRQVEAADLVRFGLIPEFIGRLPVIAT 312
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F M NV L F D ALR +AKKA+ +NTGARGLR
Sbjct: 313 LEELDEEALMQILTEPKNALTRQYQYLFEMENVDLIFEDSALRAVAKKALDRNTGARGLR 372
Query: 431 ALLENILTEAMFEIPETK-IGTSSVNAVLVDKEA 463
++LEN+L E M+++P + +GT +N +++ +A
Sbjct: 373 SILENVLLETMYDLPSRQDVGTVIINEAVINDKA 406
>gi|262369922|ref|ZP_06063249.1| ATP-dependent protease Clp [Acinetobacter johnsonii SH046]
gi|262314961|gb|EEY96001.1| ATP-dependent protease Clp [Acinetobacter johnsonii SH046]
Length = 438
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/394 (50%), Positives = 263/394 (66%), Gaps = 49/394 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+
Sbjct: 62 LPKPHEIRAALDQYVIGQDVAKKT---------------LSVAVYNHYKRL--------- 97
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+ + ++D+ VE+ KSN+LL+GPTGSGKTLLA+T+AR+++VPF
Sbjct: 98 ---------------KATHGGHKHDDAVEIAKSNILLVGPTGSGKTLLAQTMARLLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 143 AMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK +
Sbjct: 203 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFSGLEKIV 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ L+D L V++ DLV +GLIPEFIGR P++ +
Sbjct: 261 QQRQEKGGIGFTAEVKKKDEGKKLSD------LFRQVEATDLVKFGLIPEFIGRLPVIAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F M NV L F D ALR +AKKA+ +NTGARGLR
Sbjct: 315 LEELDEEALMQILTEPKNALTRQYQHLFDMENVDLVFEDSALRAVAKKALDRNTGARGLR 374
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
++LEN L E M+++P T +GT VN +++ A
Sbjct: 375 SILENTLLETMYDLPSRTDVGTVVVNEDVINGTA 408
>gi|293610273|ref|ZP_06692574.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827505|gb|EFF85869.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 439
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/395 (50%), Positives = 264/395 (66%), Gaps = 52/395 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+
Sbjct: 62 LPKPHEIRAALDQYVIGQDLAKKT---------------LSVAVYNHYKRL--------- 97
Query: 132 VSDHLYVDSILGSGVKSG-NCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
K G N +V + VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VP
Sbjct: 98 ---------------KVGHNGHVSKE--VEIAKSNILLIGPTGSGKTLLAQTLARLLDVP 140
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ +
Sbjct: 141 FAMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSIT 200
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK
Sbjct: 201 RDVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFSGLEKI 258
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ +R++ IGF A V+ T L + L V+ DLV +GLIPEFIGR P++
Sbjct: 259 VQQRQEKGGIGFTADVKNKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+E+ L+Q+L EPKNAL RQY+ +F+M NV L F D ALR +AKKA+ +NTGARGL
Sbjct: 313 TLEELDEEALMQILTEPKNALTRQYQYLFTMENVDLIFEDSALRAVAKKALERNTGARGL 372
Query: 430 RALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
R+++EN+L E M+++P T +GT +N +++ EA
Sbjct: 373 RSIMENVLLETMYDLPSRTDVGTVIINEAVINGEA 407
>gi|381197076|ref|ZP_09904417.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
lwoffii WJ10621]
Length = 436
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/394 (50%), Positives = 263/394 (66%), Gaps = 49/394 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+
Sbjct: 60 LPKPHEIRAALDQYVIGQDVAKKT---------------LSVAVYNHYKRL--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+ + ++D+ VE+ KSN+LL+GPTGSGKTLLA+T+AR+++VPF
Sbjct: 96 ---------------KATHGGHKHDDAVEIAKSNILLVGPTGSGKTLLAQTMARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 141 AMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK +
Sbjct: 201 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFSGLEKIV 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ L+D L V++ DLV +GLIPEFIGR P++ +
Sbjct: 259 QQRQEKGGIGFTAEVKKKDEGKKLSD------LFRQVEATDLVKFGLIPEFIGRLPVIAT 312
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F M NV L F D ALR +AKKA+ +NTGARGLR
Sbjct: 313 LEELDEEALMQILTEPKNALTRQYQHLFDMENVDLVFEDSALRAVAKKALDRNTGARGLR 372
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
++LEN L E M+++P T +GT VN +++ A
Sbjct: 373 SILENTLLETMYDLPSRTDVGTVVVNEDVINGTA 406
>gi|375137008|ref|YP_004997658.1| ATP-dependent protease ATP-binding subunit [Acinetobacter
calcoaceticus PHEA-2]
gi|427422963|ref|ZP_18913129.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-136]
gi|325124453|gb|ADY83976.1| ATP-dependent protease ATP-binding subunit [Acinetobacter
calcoaceticus PHEA-2]
gi|425700063|gb|EKU69654.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-136]
Length = 437
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/395 (50%), Positives = 264/395 (66%), Gaps = 52/395 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKT---------------LSVAVYNHYKRL--------- 95
Query: 132 VSDHLYVDSILGSGVKSG-NCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
K G N +V + VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VP
Sbjct: 96 ---------------KVGHNGHVSKE--VEIAKSNILLIGPTGSGKTLLAQTLARLLDVP 138
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ +
Sbjct: 139 FAMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSIT 198
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK
Sbjct: 199 RDVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFSGLEKI 256
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ +R++ IGF A V+ T L + L V+ DLV +GLIPEFIGR P++
Sbjct: 257 VQQRQEKGGIGFTADVKNKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIA 310
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+E+ L+Q+L EPKNAL RQY+ +F+M NV L F D ALR +AKKA+ +NTGARGL
Sbjct: 311 TLEELDEEALMQILTEPKNALTRQYQYLFTMENVDLIFEDSALRAVAKKALERNTGARGL 370
Query: 430 RALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
R+++EN+L E M+++P T +GT +N +++ EA
Sbjct: 371 RSIMENVLLETMYDLPSRTDVGTVIINEAVINGEA 405
>gi|425740489|ref|ZP_18858660.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-487]
gi|425494753|gb|EKU60948.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-487]
Length = 437
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/394 (50%), Positives = 263/394 (66%), Gaps = 50/394 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+ K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKT---------------LSVAVYNHYKRL------KVG 98
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
S H+ D VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 99 QSGHVSKD-------------------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 140 AMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK +
Sbjct: 200 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIV 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ + + + L V+ DLV +GLIPEFIGR P++ +
Sbjct: 258 QQRQEKGGIGFTADVKKKDESKKIAE------LFRQVEPTDLVKFGLIPEFIGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F+M NV L F D ALR +AK+A+ +NTGARGLR
Sbjct: 312 LEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLR 371
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
++LEN+L E M+++P T +GT +N +++ EA
Sbjct: 372 SILENVLLETMYDLPSRTDVGTVFINEAVINGEA 405
>gi|254448887|ref|ZP_05062343.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [gamma
proteobacterium HTCC5015]
gi|198261577|gb|EDY85866.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [gamma
proteobacterium HTCC5015]
Length = 426
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/410 (49%), Positives = 263/410 (64%), Gaps = 56/410 (13%)
Query: 62 RNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKR 121
+ ++ G+ +LPTP EI + LD++VIGQERAKK AVYNHYKR
Sbjct: 55 QEQSESGDTNLPTPHEIKQRLDDYVIGQERAKKV---------------LSVAVYNHYKR 99
Query: 122 IYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAK 181
+ S NDEI EL KSN+LL+GPTGSGKTLLA+
Sbjct: 100 MESSQ---------------------------RNDEI-ELSKSNILLIGPTGSGKTLLAE 131
Query: 182 TLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV 241
T+AR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DK+
Sbjct: 132 TMARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKVS 191
Query: 242 -KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICG 300
KA++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICG
Sbjct: 192 RKADNPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSNILFICG 249
Query: 301 GAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPE 360
GAF GL+K I ER + IGF A V+ D L LL V+ DLV YGLIPE
Sbjct: 250 GAFAGLDKVIRERSEKGGIGFAAEVKTE------EDDLAIGQLLHEVEPEDLVKYGLIPE 303
Query: 361 FIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAM 420
FIGR P++ +L L E+ L+++L +PKNA+ +Q+K +F M V++ F D AL IA+KAM
Sbjct: 304 FIGRLPVVATLEELGEEALIEILTQPKNAIIKQFKYLFEMEGVEIEFLDAALSAIAQKAM 363
Query: 421 AKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+ TGARGLR +LENIL + M+E+P SV+ V++D + P
Sbjct: 364 ERKTGARGLRTILENILLDTMYEVP----SMESVSKVVIDDAVIRGESEP 409
>gi|294651551|ref|ZP_06728860.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter
haemolyticus ATCC 19194]
gi|292822574|gb|EFF81468.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter
haemolyticus ATCC 19194]
Length = 436
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/416 (48%), Positives = 268/416 (64%), Gaps = 53/416 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+
Sbjct: 60 LPKPHEIRAALDQYVIGQDIAKKT---------------LSVAVYNHYKRL--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G + EI E+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 96 ---------------KAGQSGHTHKEI-EIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 140 AMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK +
Sbjct: 200 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTANILFICGGAFSGLEKIV 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ D+ S L V++ DLV +GLIPEFIGR P++ +
Sbjct: 258 QQRQEKGGIGFTADVKNK------DDSKKVSELFRQVEATDLVKFGLIPEFIGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F+M +V L F + ALR +AKKA+ +NTGARGLR
Sbjct: 312 LEELDEEALMQILTEPKNALTRQYQYLFTMEDVDLVFEESALRAVAKKALERNTGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERV 486
++LEN+L E M+++P S V V+VD+ + P A+ L +E V
Sbjct: 372 SILENVLLETMYDLP----SRSDVGTVIVDEAVINGTAKPKFKAERLPQTTSVETV 423
>gi|445437356|ref|ZP_21441002.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC021]
gi|444753938|gb|ELW78574.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC021]
Length = 437
Score = 370 bits (950), Expect = e-99, Method: Compositional matrix adjust.
Identities = 198/394 (50%), Positives = 263/394 (66%), Gaps = 50/394 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+ K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKT---------------LSVAVYNHYKRL------KVG 98
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
S H+ D VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 99 QSGHVSKD-------------------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 140 AMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK +
Sbjct: 200 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIV 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ + + + L V+ DLV +GLIPEFIGR P++ +
Sbjct: 258 QQRQEKGGIGFTADVKKKDESKKIAE------LFRQVEPTDLVKFGLIPEFIGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F+M NV L F D ALR +AK+A+ +NTGARGLR
Sbjct: 312 LEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLR 371
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
++LEN+L E M+++P T +GT +N +++ EA
Sbjct: 372 SILENVLLETMYDLPSRTDVGTVFINEAVINGEA 405
>gi|257455805|ref|ZP_05621031.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Enhydrobacter
aerosaccus SK60]
gi|257446819|gb|EEV21836.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Enhydrobacter
aerosaccus SK60]
Length = 427
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 201/392 (51%), Positives = 263/392 (67%), Gaps = 42/392 (10%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTPKEI LDE+VIGQ++AKK+ AVYNHYKR+
Sbjct: 67 LPTPKEIRSHLDEYVIGQDKAKKT---------------LAVAVYNHYKRLK-------- 103
Query: 132 VSDHLYVDSILGS-GVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
VS+ L D L + G + D +VEL KSN+LL+GPTGSGKTLLA+TLAR+++VP
Sbjct: 104 VSEKLSEDKALTTLGAE--------DAMVELSKSNILLIGPTGSGKTLLAQTLARLLDVP 155
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LT+AGYVGED E+++ KLL AA+FDVE AQ+GI+YIDE+DKI K+E+ +
Sbjct: 156 FALADATTLTEAGYVGEDVENIVQKLLQAAEFDVERAQKGIIYIDEIDKISRKSENPSIT 215
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGTV N IP G RKHP + I +DT +IL ICGGAF GL+
Sbjct: 216 RDVSGEGVQQALLKLIEGTVAN--IPPQGGRKHPNQEMIQVDTSNILVICGGAFAGLDNV 273
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I +R + + IGF A V+A T L + V+ DL+ +GLIPE IGR P++
Sbjct: 274 IQQRTEKTGIGFNAEVKAK------DSGKKTGELFKQVEPEDLIKFGLIPELIGRLPVVA 327
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+E+ LVQ+L EPKNAL +QY+ +F M N L FTDDAL IAK+A+ + TGARGL
Sbjct: 328 TLEELDEEALVQILTEPKNALVKQYEYLFEMENATLSFTDDALVAIAKQALKRRTGARGL 387
Query: 430 RALLENILTEAMFEIPETKIG-TSSVNAVLVD 460
R+++EN L + M+E+P G T +VN ++D
Sbjct: 388 RSIVENALLDTMYELPSMTPGKTVTVNKAVID 419
>gi|424057019|ref|ZP_17794536.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
nosocomialis Ab22222]
gi|407440552|gb|EKF47069.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
nosocomialis Ab22222]
Length = 437
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 198/394 (50%), Positives = 263/394 (66%), Gaps = 50/394 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+ K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKT---------------LSVAVYNHYKRL------KVG 98
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
S H+ D VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 99 QSGHVSKD-------------------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 140 AMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK +
Sbjct: 200 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIV 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ + + + L V+ DLV +GLIPEFIGR P++ +
Sbjct: 258 QQRQEKGGIGFTADVKKKDESKKIAE------LFRQVEPTDLVKFGLIPEFIGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F+M NV L F D ALR +AK+A+ +NTGARGLR
Sbjct: 312 LEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLR 371
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
++LEN+L E M+++P T +GT +N +++ EA
Sbjct: 372 SILENVLLETMYDLPSRTDVGTVFINEAVINGEA 405
>gi|402758021|ref|ZP_10860277.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter sp.
NCTC 7422]
Length = 436
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 199/394 (50%), Positives = 263/394 (66%), Gaps = 50/394 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+
Sbjct: 60 LPKPHEIRAALDQYVIGQDVAKKT---------------LSVAVYNHYKRL--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G + EI E+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 96 ---------------KVGQSTHGHQEI-EIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 140 AMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK +
Sbjct: 200 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTANILFICGGAFSGLEKIV 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ D+ S L V++ DLV +GLIPEFIGR P++ +
Sbjct: 258 QQRQEKGGIGFTADVKNK------DDSKKVSELFRQVEATDLVKFGLIPEFIGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F+M NV L F + ALR +AKKA+ +NTGARGLR
Sbjct: 312 LEELDEEALMQILTEPKNALTRQYQYLFTMENVDLVFDESALRAVAKKALDRNTGARGLR 371
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
++LEN+L E M+++P T +GT V+A +++ A
Sbjct: 372 SILENVLLETMYDLPSRTDVGTVIVDAAVINGTA 405
>gi|226953944|ref|ZP_03824408.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter sp.
ATCC 27244]
gi|226835298|gb|EEH67681.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter sp.
ATCC 27244]
Length = 436
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 265/407 (65%), Gaps = 53/407 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+
Sbjct: 60 LPKPHEIRAALDQYVIGQDIAKKT---------------LSVAVYNHYKRL--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G + EI E+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 96 ---------------KAGQSGHTHKEI-EIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 140 AMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK +
Sbjct: 200 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTANILFICGGAFSGLEKIV 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ D+ S L V++ DLV +GLIPEFIGR P++ +
Sbjct: 258 QQRQEKGGIGFTADVKNK------DDSKKVSELFRQVEATDLVKFGLIPEFIGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F+M +V L F + ALR +AKKA+ +NTGARGLR
Sbjct: 312 LEELDEEALMQILTEPKNALTRQYQYLFTMEDVDLVFEESALRAVAKKALERNTGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKIL 477
++LEN+L E M+++P S V V+VD+ + P A+ L
Sbjct: 372 SILENVLLETMYDLP----SRSDVGTVIVDEAVINGTAKPKFKAERL 414
>gi|86137327|ref|ZP_01055904.1| ATP-dependent protease ATP-binding subunit [Roseobacter sp. MED193]
gi|85825662|gb|EAQ45860.1| ATP-dependent protease ATP-binding subunit [Roseobacter sp. MED193]
Length = 422
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 202/414 (48%), Positives = 277/414 (66%), Gaps = 60/414 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P+PK+IC+ LD++VIGQ AKK AV+NHYKR+ H+
Sbjct: 63 VPSPKDICEVLDDYVIGQAMAKKV---------------LSVAVHNHYKRLNHAQ----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+GN +EL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ---------------KAGN-------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K+E+ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL++ I
Sbjct: 201 DVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDRII 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
++R + S++GFGA VR N G + + ++ DL+ +GLIPEF+GR P+L +
Sbjct: 259 AQRGKGSAMGFGADVRNNDDRG-------VGEIFQELEPEDLLKFGLIPEFVGRLPVLAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED LV +L +PKNAL +QY+++F + +L FTD+AL IAK+A+ + TGARGLR
Sbjct: 312 LEDLDEDALVTILTKPKNALVKQYQRLFELEETELDFTDEALSAIAKRAIERKTGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELE 484
++LE++L E MFE+P G SV V+V++EAV S P ++H D E E
Sbjct: 372 SILEDLLLETMFELP----GMESVTKVVVNEEAVTSDAQP----LMIHTDAEKE 417
>gi|430375835|ref|ZP_19430238.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella macacae
0408225]
gi|429541066|gb|ELA09094.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella macacae
0408225]
Length = 428
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 201/413 (48%), Positives = 275/413 (66%), Gaps = 49/413 (11%)
Query: 36 EIMGGFIRKDGE--SNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAK 93
E+ GFI D + S+G E+ S NR +LPTPK+I + LDE+VIGQ+RAK
Sbjct: 36 EVCEGFIDVDDDIDSHGEEAASYENWANR--------ELPTPKQIREHLDEYVIGQDRAK 87
Query: 94 KSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNV 153
K+ AVYNHYKR+ V+D + VK+G
Sbjct: 88 KT---------------LAVAVYNHYKRLK--------VADQFQNEPKF---VKTG---- 117
Query: 154 ENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVL 213
+D ++EL KSN+LL+GPTGSGKTLLA+TLAR+++VPF I DAT LT+AGYVGED E+++
Sbjct: 118 ADDAMIELSKSNILLIGPTGSGKTLLAQTLARLIDVPFAIADATTLTEAGYVGEDVENIV 177
Query: 214 YKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNV 272
KLL +AD+D+E Q+GI+YIDE+DKI K E+ + RDVSGEGVQQALLK++EGT+ NV
Sbjct: 178 LKLLQSADYDIEKTQKGIIYIDEIDKISRKGENVSITRDVSGEGVQQALLKLIEGTITNV 237
Query: 273 PIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTG 332
P P G RKHP + I +DT +IL ICGGAF GL+K I +R + + IGF A V+A +
Sbjct: 238 P-PQGG-RKHPNQEMIQVDTSNILVICGGAFAGLDKVIQQRTEKTGIGFNADVKAKDSSK 295
Query: 333 GLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGR 392
+ L + V+ DL+ +GLIPE IGR P++ +L L+E+ L+Q+L EPKNAL +
Sbjct: 296 KI------GELFKQVEPEDLIKFGLIPELIGRLPVVATLEELDEESLIQILTEPKNALVK 349
Query: 393 QYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP 445
QY+ +F+M N KL F+ +AL IAK+A+ +NTGARGLR+++EN L + M+E+P
Sbjct: 350 QYEYLFNMENAKLEFSQEALIAIAKQALKRNTGARGLRSIVENALLDTMYELP 402
>gi|121534155|ref|ZP_01665980.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermosinus
carboxydivorans Nor1]
gi|121307258|gb|EAX48175.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermosinus
carboxydivorans Nor1]
Length = 420
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 270/401 (67%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI + LD++VIGQE AKK+ AVYNHYKRI
Sbjct: 60 DIPKPKEIKEILDQYVIGQEEAKKT---------------LAVAVYNHYKRIN------- 97
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
LGS + E VEL+KSN++++GPTGSGKTLLA+TLA+I+NVP
Sbjct: 98 -----------LGSKM----------EDVELQKSNIVMLGPTGSGKTLLAQTLAKILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A++GIVYIDE+DKI K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ +VP P G RKHP + I IDT +ILFICGGAF G++K
Sbjct: 197 RDVSGEGVQQALLKILEGTIASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFDGIDKI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
IS R ++GFGA +++ + +L + DL+ +GLIPEF+GR P++V
Sbjct: 255 ISARTGKKTLGFGADIKSREKKQ-------VGEILRQILPEDLLKFGLIPEFVGRLPVIV 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+ED LV++L+EPKNAL +QY+K ++NV+L F +DALR IA++A+ +NTGARGL
Sbjct: 308 TLDALDEDALVRILVEPKNALVKQYQKFLELDNVQLEFKEDALRAIAQEALKRNTGARGL 367
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA++EN++ M+E+P + V +V KE V + + P
Sbjct: 368 RAIIENLMRNVMYEVP----SRTDVTKCIVTKEVVLNKEEP 404
>gi|406038260|ref|ZP_11045615.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
ursingii DSM 16037 = CIP 107286]
Length = 436
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 195/391 (49%), Positives = 261/391 (66%), Gaps = 49/391 (12%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LP P+EI K LD++VIGQ+ AKK+ AVYNHYKR+
Sbjct: 59 ELPKPQEIRKALDQYVIGQDIAKKT---------------LSVAVYNHYKRL-------- 95
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
K G + ++ +E+ KSN+LL+GPTGSGKTLLA+TLAR+++VP
Sbjct: 96 ----------------KVGQSGHKANQDIEIAKSNILLIGPTGSGKTLLAQTLARLLDVP 139
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ +
Sbjct: 140 FAMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSIT 199
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK
Sbjct: 200 RDVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTANILFICGGAFSGLEKI 257
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ +R++ IGF A V+ + L + L V+ DLV +GLIPEFIGR P++
Sbjct: 258 VQQRQEKGGIGFTAEVKNKDESKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIA 311
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+E L+Q+L EPKNAL RQY+ +F+M +V L F D ALR +AKKA+ +NTGARGL
Sbjct: 312 TLEELDEAALMQILTEPKNALTRQYQYLFNMEDVDLVFEDAALRAVAKKALERNTGARGL 371
Query: 430 RALLENILTEAMFEIP-ETKIGTSSVNAVLV 459
R++LEN+L E M+E+P +GT +N ++
Sbjct: 372 RSILENVLLETMYELPSRDDVGTVIINEAVI 402
>gi|254512525|ref|ZP_05124592.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodobacteraceae bacterium KLH11]
gi|221536236|gb|EEE39224.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodobacteraceae bacterium KLH11]
Length = 421
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 201/408 (49%), Positives = 277/408 (67%), Gaps = 59/408 (14%)
Query: 64 RNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIY 123
++S+G +PTPK+IC+ LD++VIGQ AK+ AV+NHYKR+
Sbjct: 58 KSSDG---VPTPKDICEVLDDYVIGQATAKRV---------------LSVAVHNHYKRLN 99
Query: 124 HSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTL 183
H+ K+G+ +EL KSN+LL+GPTG GKTLLA+TL
Sbjct: 100 HAQ--------------------KAGS-------DIELAKSNILLIGPTGCGKTLLAQTL 132
Query: 184 ARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-K 242
ARI++VPFT+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K
Sbjct: 133 ARILDVPFTMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRK 192
Query: 243 AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGA 302
+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGA
Sbjct: 193 SENPSITRDVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGA 250
Query: 303 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFI 362
F GL+K I++R + S++GFGA VR N G + + ++ DL+ +GLIPEF+
Sbjct: 251 FAGLDKIIAQRGKGSAMGFGADVRDNDDRG-------VGEIFKELEPEDLLKFGLIPEFV 303
Query: 363 GRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAK 422
GR P+L +L L+ED LV +L PKNAL +QY+++F + + +L FTDDAL+ IAKKA+ +
Sbjct: 304 GRLPVLATLEDLDEDALVTILTSPKNALVKQYQRLFELEDAELAFTDDALKAIAKKAIER 363
Query: 423 NTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
TGARGLR++LE+IL + MFE+P G +V V+V++EAV S P
Sbjct: 364 KTGARGLRSILEDILLDTMFELP----GMKNVTEVVVNEEAVTSESQP 407
>gi|346995187|ref|ZP_08863259.1| ATP-dependent protease ATP-binding subunit ClpX [Ruegeria sp. TW15]
Length = 421
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 201/408 (49%), Positives = 277/408 (67%), Gaps = 59/408 (14%)
Query: 64 RNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIY 123
++S+G +PTPK+IC+ LD++VIGQ AK+ AV+NHYKR+
Sbjct: 58 KSSDG---VPTPKDICEVLDDYVIGQATAKRV---------------LSVAVHNHYKRLN 99
Query: 124 HSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTL 183
H+ K+G+ +EL KSN+LL+GPTG GKTLLA+TL
Sbjct: 100 HAQ--------------------KAGS-------DIELAKSNILLIGPTGCGKTLLAQTL 132
Query: 184 ARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-K 242
ARI++VPFT+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K
Sbjct: 133 ARILDVPFTMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRK 192
Query: 243 AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGA 302
+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGA
Sbjct: 193 SENPSITRDVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGA 250
Query: 303 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFI 362
F GL+K I++R + S++GFGA VR N G + + ++ DL+ +GLIPEF+
Sbjct: 251 FAGLDKIIAQRGKGSAMGFGADVRDNDERG-------VGEIFKDLEPEDLLKFGLIPEFV 303
Query: 363 GRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAK 422
GR P+L +L L+ED LV +L PKNAL +QY+++F + + +L FTDDAL+ IAKKA+ +
Sbjct: 304 GRLPVLATLEDLDEDALVTILTSPKNALVKQYQRLFELEDAELGFTDDALKAIAKKAIER 363
Query: 423 NTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
TGARGLR++LE+IL + MFE+P G +V V+V++EAV S P
Sbjct: 364 KTGARGLRSILEDILLDTMFELP----GMKNVTEVVVNEEAVTSDSQP 407
>gi|210621781|ref|ZP_03292810.1| hypothetical protein CLOHIR_00755 [Clostridium hiranonis DSM 13275]
gi|210154545|gb|EEA85551.1| hypothetical protein CLOHIR_00755 [Clostridium hiranonis DSM 13275]
Length = 412
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 204/396 (51%), Positives = 268/396 (67%), Gaps = 62/396 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKE+ + L+++VIGQE+AKK+ AVYNHYKRIY +S
Sbjct: 62 LPKPKEMMEILNDYVIGQEKAKKA---------------LSVAVYNHYKRIYSNS----- 101
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
END V+++KSN+LL+GPTGSGKTLLA+TLA+ +NVPF
Sbjct: 102 ----------------------END--VDIQKSNILLLGPTGSGKTLLAQTLAKTLNVPF 137
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DATALT+AGYVGED E++L KL+ AAD DVE A++GI+YIDE+DKI K+E+ + R
Sbjct: 138 AMADATALTEAGYVGEDVENILLKLIQAADNDVEKAEKGIIYIDEIDKIAKKSENVSITR 197
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV NVP P G RKHP + I IDT +ILFI GGAF GLE+ I
Sbjct: 198 DVSGEGVQQALLKILEGTVANVP-PQGG-RKHPNREFIKIDTTNILFILGGAFDGLEQII 255
Query: 311 SERRQDSSIGFGAPV--RANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
R + ++GFGA + + N+ G + E+V DL+ YG+IPEFIGR P++
Sbjct: 256 QRRSSEKTLGFGAKIESKKNLDLG---------KIYENVLPEDLLKYGIIPEFIGRIPVI 306
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L+ L+ED LV +L EPKNAL +QYKK+F + +V+L F DDALR IAKKA+ +NTGARG
Sbjct: 307 ATLNMLDEDALVTILKEPKNALVKQYKKLFDIEDVELEFEDDALREIAKKAIDRNTGARG 366
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
LR+++ENI+ + M+E+P +V V+V KEAV
Sbjct: 367 LRSIVENIMMDTMYEVP----SEENVEKVVVTKEAV 398
>gi|308799613|ref|XP_003074587.1| CLP protease regulatory subunit CLPX (ISS) [Ostreococcus tauri]
gi|116000758|emb|CAL50438.1| CLP protease regulatory subunit CLPX (ISS) [Ostreococcus tauri]
Length = 506
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 202/400 (50%), Positives = 274/400 (68%), Gaps = 24/400 (6%)
Query: 65 NSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYH 124
NS +LPTP+++ + LDE+++GQ AKK +L AVYNHYKR+
Sbjct: 92 NSYAIDELPTPRQMVRVLDEYIVGQAHAKK-----VL----------SVAVYNHYKRVGA 136
Query: 125 SSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLA 184
S Q+ + L ++ + N +D V LEKSN++L GPTGSGKTLLAKTLA
Sbjct: 137 ESEQRAREAADLSAVERELENDRTESANSFDD--VTLEKSNIILCGPTGSGKTLLAKTLA 194
Query: 185 RIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KA 243
+ NVPF I D+T LTQAGYVGED ES+L+KLL A+FDV AAQRGIVYIDE+DK+ K+
Sbjct: 195 KFANVPFAIADSTTLTQAGYVGEDVESILHKLLQNANFDVNAAQRGIVYIDEIDKLARKS 254
Query: 244 ESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAF 303
++ + RDVSGEGVQQALLKM+EGTVVNVP + G RK+P +P+DT +ILFICGGAF
Sbjct: 255 DTVSVTRDVSGEGVQQALLKMVEGTVVNVP--EKGGRKNPNSQFVPLDTANILFICGGAF 312
Query: 304 VGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIG 363
GLE I +R+ SSIGFG PV A + ++ V++GD+V+YGLIPEF+G
Sbjct: 313 TGLENVIQQRQSKSSIGFGKPVSARDEPNSKEAIEAAAKAMQEVETGDIVSYGLIPEFVG 372
Query: 364 RFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKN 423
RFP+ V L AL E +LV +L +P++A+G+Q++++ M+ V+L +TDDAL IA A+ +
Sbjct: 373 RFPVCVPLQALGEKELVDILTKPRDAIGKQFQRLMDMHGVELQYTDDALAHIASAAVKRG 432
Query: 424 TGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEA 463
TGARGLR LLE +LT+AMFE+P+ + ++ V++D E+
Sbjct: 433 TGARGLRTLLERLLTDAMFEVPDDPM----ISEVIIDGES 468
>gi|313891580|ref|ZP_07825190.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dialister
microaerophilus UPII 345-E]
gi|313120039|gb|EFR43221.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dialister
microaerophilus UPII 345-E]
Length = 411
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 198/383 (51%), Positives = 260/383 (67%), Gaps = 51/383 (13%)
Query: 67 EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSS 126
E LPTP EI K +D++VI QE AK I AVYNHYKRI +
Sbjct: 56 EEEFKLPTPVEIKKYMDQYVIDQEEAK---------------IALAVAVYNHYKRIKYE- 99
Query: 127 LQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARI 186
K G ND+ VEL+KSN++++GPTGSGKTLLA+TLAR
Sbjct: 100 --------------------KDGG----NDD-VELQKSNIIMLGPTGSGKTLLAQTLARF 134
Query: 187 VNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAES 245
++VPF I+DAT LT+AGYVGED E++L +L+ AAD+D+E A+RGIVYIDE+DKI K+E+
Sbjct: 135 LDVPFAISDATTLTEAGYVGEDVENILLRLIQAADYDLEKAERGIVYIDEIDKIARKSEN 194
Query: 246 RNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVG 305
+ RDVSGEGVQQALLK+LEGTV NVP P G RKHP + I +DT ILFICGGAF G
Sbjct: 195 PSITRDVSGEGVQQALLKILEGTVANVP-PQGG-RKHPNQEMIQLDTSKILFICGGAFAG 252
Query: 306 LEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRF 365
++K +++R S++GFGA ++ + +L V+ DL+ +GLIPEFIGR
Sbjct: 253 MDKVVAKRLTKSAVGFGADIKKKEEKD-------VAKILNMVEPEDLLKFGLIPEFIGRL 305
Query: 366 PILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTG 425
PILV+LS L+ED LV++L +PKNAL +QYKK+ M+NV+L F + A+R IAKKA+ +NTG
Sbjct: 306 PILVALSPLSEDALVRILTQPKNALIKQYKKLLKMDNVELEFEEKAIRAIAKKAIERNTG 365
Query: 426 ARGLRALLENILTEAMFEIPETK 448
ARGLRA++E I+ + M++IPE K
Sbjct: 366 ARGLRAIIEKIMQKVMYDIPEMK 388
>gi|421849602|ref|ZP_16282580.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus
NBRC 101655]
gi|421853138|ref|ZP_16285817.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371459663|dbj|GAB27783.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus
NBRC 101655]
gi|371478598|dbj|GAB31020.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 378
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 272/400 (68%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EICK LD++VIGQ +AKK AV+NHYKR+ +
Sbjct: 19 VPTPREICKVLDDYVIGQAQAKKV---------------LSVAVHNHYKRLTQVA----- 58
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G+ VE+ KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 59 ---------------KAGD--------VEIAKSNILLIGPTGSGKTLLAQTLARILDVPF 95
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 96 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISKKSDNPSITR 155
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ++LFICGGAF GL+K I
Sbjct: 156 DVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNMLFICGGAFAGLDKII 213
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + ++IGFGA VRA D T +L V+ DL+ +GLIPEFIGR P++ +
Sbjct: 214 SARGKGTNIGFGADVRA-------PDERKTGEILHDVEPEDLMKFGLIPEFIGRLPVIAT 266
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+++L EPKNAL +QY+++F M NV+L+FTDDAL+ IA +A+ + TGARGLR
Sbjct: 267 LGDLDEAALIKILTEPKNALVKQYQRLFQMENVQLNFTDDALKAIADRAIVRKTGARGLR 326
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE+IL MF++P G +V V+V+++ +P
Sbjct: 327 SILESILMSTMFDLP----GLENVEEVVVNRDVAEGKASP 362
>gi|150396096|ref|YP_001326563.1| ATP-dependent protease ATP-binding subunit ClpX [Sinorhizobium
medicae WSM419]
gi|166215207|sp|A6U7U8.1|CLPX_SINMW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|150027611|gb|ABR59728.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sinorhizobium
medicae WSM419]
Length = 425
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 203/402 (50%), Positives = 273/402 (67%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI K LDE+VIGQ++AK+ IL AV+NHYKR+ H++
Sbjct: 66 VPTPQEIIKVLDEYVIGQQQAKR-----IL----------SVAVHNHYKRLAHAA----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KS + VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KSSD--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGFGA VRA + R G +L ++ DLV +GLIPEFIGR P+L
Sbjct: 261 SARGEKTSIGFGATVRAPEDRRVG---------EVLRELEPEDLVKFGLIPEFIGRLPVL 311
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+ED L+Q+L EPKNAL +QY+++F M +V+L+F +DALR IA++A+ + TGARG
Sbjct: 312 ATLEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELNFHEDALREIARRAIVRKTGARG 371
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E IL + MFE+P + V V++ +E V P
Sbjct: 372 LRSIMEKILLDTMFELPTLE----GVREVVISEEVVKGTARP 409
>gi|410727501|ref|ZP_11365718.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Clostridium
sp. Maddingley MBC34-26]
gi|410598747|gb|EKQ53314.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Clostridium
sp. Maddingley MBC34-26]
Length = 429
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 203/401 (50%), Positives = 270/401 (67%), Gaps = 59/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P P EI + LD +VIGQERAKKS AVYNHYKRI
Sbjct: 60 VPKPNEIKEYLDSYVIGQERAKKS---------------LAVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N N E+ + VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF
Sbjct: 96 ------------------NTNKEDID-VELSKSNILLLGPTGSGKTLLAQTLARFLNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ AD+DVE A+RGI+YIDE+DKI K+E+ + R
Sbjct: 137 AIADATTLTEAGYVGEDVENILLKLIQNADYDVEKAERGIIYIDEIDKIARKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV +VP P G RKHP + I I+T +ILFICGGAF G++K I
Sbjct: 197 DVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQINTSNILFICGGAFDGVDKII 254
Query: 311 SERRQDSSIGFGAPVRA-NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
R + SS+GFGA ++A N + G SLL+ + DL+ +GLIPEF+GR PILV
Sbjct: 255 ENRTRKSSMGFGAKIQAKNEKDVG--------SLLKEIMPADLLKFGLIPEFVGRLPILV 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L +L++D L+Q+L +PKNAL +QYKK+F +++VKL F D++L IA++A+++ TGARGL
Sbjct: 307 TLESLDKDALIQILTKPKNALVKQYKKLFELDDVKLEFDDNSLNAIAEEAISRETGARGL 366
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA++E+I+ E M+EIP + + V + ++A+ AP
Sbjct: 367 RAIIEDIMNEVMYEIP----SDNRITKVTITEDAIKDKKAP 403
>gi|338981065|ref|ZP_08632301.1| ClpX [Acidiphilium sp. PM]
gi|338208031|gb|EGO95930.1| ClpX [Acidiphilium sp. PM]
Length = 375
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 202/394 (51%), Positives = 273/394 (69%), Gaps = 61/394 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EICK LD++VIGQ+ AK+ IL AV+NHYKR+ H+ QK
Sbjct: 19 VPTPREICKVLDDYVIGQDHAKR-----IL----------SVAVHNHYKRLAHA--QKN- 60
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND +E+ KSN++L+GPTGSGKTLLA+TLARI++VPF
Sbjct: 61 -----------------------ND--IEIAKSNIMLVGPTGSGKTLLAQTLARILDVPF 95
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 96 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 155
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 156 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 213
Query: 311 SERRQDSSIGFGAPVR--ANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
++R + S IGFGA VR RTG ++L V+ DL+ +GLIPEFIGR P++
Sbjct: 214 AQRGKGSGIGFGADVRDPTEQRTG---------AILREVEPEDLLKFGLIPEFIGRLPVV 264
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E L+++L +PKNAL +QY ++F M VKL+FT+DAL+++A +A+ + TGARG
Sbjct: 265 ATLEDLDEAALIEILTKPKNALVKQYGRLFEMEGVKLNFTEDALKVVAARAIQRKTGARG 324
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKE 462
LR+++ENIL E MF++P G SV V+++ E
Sbjct: 325 LRSIMENILLETMFDLP----GLDSVEEVVINGE 354
>gi|254462093|ref|ZP_05075509.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodobacterales bacterium HTCC2083]
gi|206678682|gb|EDZ43169.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodobacteraceae bacterium HTCC2083]
Length = 377
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 205/422 (48%), Positives = 278/422 (65%), Gaps = 64/422 (15%)
Query: 64 RNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIY 123
+NSEG +PTPK+IC+ LD++VIGQ AK+ AV+NHYKR+
Sbjct: 14 KNSEG---VPTPKDICQVLDDYVIGQATAKRV---------------LSVAVHNHYKRLN 55
Query: 124 HSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTL 183
H+ +N EI EL KSN+LLMGPTG GKTLLA+TL
Sbjct: 56 HAQ---------------------------KNSEI-ELAKSNILLMGPTGCGKTLLAQTL 87
Query: 184 ARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-K 242
AR ++VPFT+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K
Sbjct: 88 ARTLDVPFTMADATTLTEAGYVGEDVENIILKLLQASEYNVEKAQRGIVYIDEVDKITRK 147
Query: 243 AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGA 302
+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGA
Sbjct: 148 SENPSITRDVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGA 205
Query: 303 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFI 362
F GL+K I+ R + S++GFGA VR N G + ++ DL+ +GLIPEF+
Sbjct: 206 FAGLDKIIAARGKGSAMGFGADVRDNDDRG-------IGEIFTELEPEDLLRFGLIPEFV 258
Query: 363 GRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAK 422
GR P+L +L L+ED LV +L +PKNAL +QY+++F + + +L FT+DAL IAK+A+ +
Sbjct: 259 GRLPVLATLEDLDEDALVTILTQPKNALVKQYQRLFELESTQLTFTEDALSAIAKRAIER 318
Query: 423 NTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGE 482
TGARGLR++LE IL + MF++P G +V V+V+ EAV S P ++HG+ E
Sbjct: 319 KTGARGLRSILEEILLDTMFDLP----GMDTVTEVVVNDEAVTSDAQP----LMIHGEPE 370
Query: 483 LE 484
E
Sbjct: 371 KE 372
>gi|209885040|ref|YP_002288897.1| ATP-dependent protease ATP-binding subunit ClpX [Oligotropha
carboxidovorans OM5]
gi|337741328|ref|YP_004633056.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Oligotropha
carboxidovorans OM5]
gi|386030344|ref|YP_005951119.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Oligotropha
carboxidovorans OM4]
gi|229484078|sp|B6JGU8.1|CLPX_OLICO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|209873236|gb|ACI93032.1| ATP-dependent Clp protease [Oligotropha carboxidovorans OM5]
gi|336095412|gb|AEI03238.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Oligotropha
carboxidovorans OM4]
gi|336098992|gb|AEI06815.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Oligotropha
carboxidovorans OM5]
Length = 424
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 203/402 (50%), Positives = 267/402 (66%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQAHAKKV---------------LSVAVHNHYKRLNHQTKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 258 SSRGRTTSIGFAASVLAPEDRRTG---------EIFREVEPEDLLKYGLIPEFVGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E L ++L+EPKNAL +QY+++F M NV+L F D+AL +A+KA+ + TGARG
Sbjct: 309 ATLEDLDEASLKKILVEPKNALVKQYQRLFEMENVELTFADEALGAVARKAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE+IL E MF++P G V V++ +E V + P
Sbjct: 369 LRSILESILLETMFDLP----GLEGVEEVVISREVVEATARP 406
>gi|310829090|ref|YP_003961447.1| ATP-dependent Clp protease ATP-binding subunit clpX [Eubacterium
limosum KIST612]
gi|308740824|gb|ADO38484.1| ATP-dependent Clp protease ATP-binding subunit clpX [Eubacterium
limosum KIST612]
Length = 421
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 265/401 (66%), Gaps = 56/401 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
++PTP+EI LDE+VI Q RAK++ AVYNHYKRI
Sbjct: 59 NVPTPREIKAKLDEYVISQHRAKRA---------------LAVAVYNHYKRI-------- 95
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N +++D+ VEL+KSN++L+GPTGSGKTLLA+TLAR+++VP
Sbjct: 96 -------------------NAMLDSDDDVELQKSNIILIGPTGSGKTLLAQTLARVLDVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KLL AAD DVE AQ+GI+YIDE+DKI K+++ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLLQAADMDVERAQKGIIYIDEIDKISRKSDNPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV NVP P G RKHP + I +DT +ILFICGGAF G++
Sbjct: 197 RDVSGEGVQQALLKILEGTVANVP-PQGG-RKHPHQEFIQLDTSNILFICGGAFDGMDGV 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R + S+GF A ++ +D LL++++ DL+ YGLIPEFIGR P++
Sbjct: 255 IERRMEKGSMGFSATIKT-------SDEKAKEELLDNIEPQDLLKYGLIPEFIGRIPVIA 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+E+ L+ +L EPKNAL +QYKKMF + V L F DAL+ IA+KA+ TGARGL
Sbjct: 308 TLQNLDEEALINILTEPKNALVKQYKKMFEIEGVALEFEKDALKAIAEKALQNGTGARGL 367
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R ++ENI+T+ MF+IP V+ V++ K+ V ++AP
Sbjct: 368 RGIIENIMTDIMFDIP----SEEGVSKVIITKDVVEQLEAP 404
>gi|260549097|ref|ZP_05823318.1| ATP-dependent protease Clp [Acinetobacter sp. RUH2624]
gi|260407825|gb|EEX01297.1| ATP-dependent protease Clp [Acinetobacter sp. RUH2624]
Length = 437
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 197/394 (50%), Positives = 263/394 (66%), Gaps = 50/394 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI L+++VIGQ+ AKK+ AVYNHYKR+ K
Sbjct: 60 LPKPHEIRAALNQYVIGQDLAKKT---------------LSVAVYNHYKRL------KVG 98
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
S H+ D VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 99 QSGHVSKD-------------------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 140 AMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK +
Sbjct: 200 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIV 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ + + + L V+ DLV +GLIPEFIGR P++ +
Sbjct: 258 QQRQEKGGIGFTADVKKKDESKKIAE------LFRQVEPTDLVKFGLIPEFIGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F+M NV L F D ALR +AK+A+ +NTGARGLR
Sbjct: 312 LEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLR 371
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
++LEN+L E M+++P T +GT +N +++ EA
Sbjct: 372 SILENVLLETMYDLPSRTDVGTVFINEAVINGEA 405
>gi|408785975|ref|ZP_11197715.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium lupini
HPC(L)]
gi|424910123|ref|ZP_18333500.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392846154|gb|EJA98676.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|408488164|gb|EKJ96478.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium lupini
HPC(L)]
Length = 425
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 203/400 (50%), Positives = 271/400 (67%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ++AKK IL AV+NHYKR+ H+S
Sbjct: 66 VPTPQDIIKILDEYVIGQKQAKK-----IL----------SVAVHNHYKRLAHAS----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G+ VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KNGD--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+A D +L ++ DLV +GLIPEFIGR P+L +
Sbjct: 261 SARGEKTSIGFGATVKAE-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EPKNAL +QY+++F M +V+L F +DALR IA+KA+ + TGARGLR
Sbjct: 314 LEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELTFHEDALREIARKAITRKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+++E IL + MFE+P + V V++ + V V P
Sbjct: 374 SIMEKILLDTMFELPTLE----GVREVVISNDVVSGVARP 409
>gi|421464270|ref|ZP_15912960.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
radioresistens WC-A-157]
gi|400205023|gb|EJO36004.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
radioresistens WC-A-157]
Length = 438
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 194/391 (49%), Positives = 263/391 (67%), Gaps = 49/391 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+ S
Sbjct: 60 LPKPHEIRAALDQYVIGQDIAKKT---------------LSVAVYNHYKRLKVSQ----- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+G K+ ++ VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 100 ------------NGQKT-------EDKVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+D+E AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 141 AMADATTLTEAGYVGEDVENIVQKLLQKADYDIEKAQKGIIYIDEIDKITRKSENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I +DT ++LFICGGAF GLEK +
Sbjct: 201 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQVDTSNVLFICGGAFSGLEKIV 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R++ IGF A V++ T L + L V+ DLV +GLIPEFIGR P++ +
Sbjct: 259 QHRQEKGGIGFTAEVKSKDETKKLAE------LFRQVEPADLVKFGLIPEFIGRLPVIAT 312
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L+EPKNAL RQY+ +F+M +V L F D ALR +AKKA+ +NTGARGLR
Sbjct: 313 LEELDEDALMQILIEPKNALTRQYQYLFNMEDVDLVFEDSALRAVAKKALERNTGARGLR 372
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVD 460
++LEN+L E M+++P +GT +N +++
Sbjct: 373 SILENVLLETMYDLPSRNDVGTVVINEAVIN 403
>gi|414166620|ref|ZP_11422852.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Afipia
clevelandensis ATCC 49720]
gi|410892464|gb|EKS40256.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Afipia
clevelandensis ATCC 49720]
Length = 424
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 202/402 (50%), Positives = 268/402 (66%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ+ AKK AV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQQHAKKV---------------LSVAVHNHYKRLNHQTKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGLEKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 258 SGRGRTTSIGFAAQVLAPEDRRTG---------EIFREVEPEDLLKYGLIPEFVGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E L ++L+EPKNAL +QY+++F M N++L F D+AL +A+KA+ + TGARG
Sbjct: 309 ATLEDLDEASLKKILVEPKNALVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE+IL E MF++P G V V++ +E V + P
Sbjct: 369 LRSILESILLETMFDLP----GLEGVEEVVISREVVEATARP 406
>gi|398353147|ref|YP_006398611.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sinorhizobium
fredii USDA 257]
gi|390128473|gb|AFL51854.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sinorhizobium
fredii USDA 257]
Length = 425
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 204/402 (50%), Positives = 271/402 (67%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI K LDE+VIGQ++AK+ IL AV+NHYKR+ H++
Sbjct: 66 VPTPQEIIKVLDEYVIGQQQAKR-----IL----------SVAVHNHYKRLAHAA----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KS + VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KSSD--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGFGA VRA + R G +L ++ DLV +GLIPEFIGR P+L
Sbjct: 261 SARGEKTSIGFGATVRAPEDRRVG---------EVLRELEPEDLVKFGLIPEFIGRLPVL 311
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+ED L+Q+L EPKNAL +QY+++F M +V+L F +DALR IAK+A+ + TGARG
Sbjct: 312 ATLEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELTFHEDALREIAKRAIVRKTGARG 371
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E IL + MFE+P + V V++ E V P
Sbjct: 372 LRSIMEKILLDTMFELPTLE----GVREVVISDEVVKGTARP 409
>gi|338974251|ref|ZP_08629613.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Bradyrhizobiaceae bacterium SG-6C]
gi|338232978|gb|EGP08106.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Bradyrhizobiaceae bacterium SG-6C]
Length = 424
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 202/402 (50%), Positives = 268/402 (66%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ+ AKK AV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQQHAKKV---------------LSVAVHNHYKRLNHQTKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGLEKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 258 SGRGRTTSIGFAAQVLAPEDRRTG---------EIFREVEPEDLLKYGLIPEFVGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E L ++L+EPKNAL +QY+++F M N++L F D+AL +A+KA+ + TGARG
Sbjct: 309 ATLEDLDEASLKKILVEPKNALVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE+IL E MF++P G V V++ +E V + P
Sbjct: 369 LRSILESILLETMFDLP----GLEGVEEVVISREVVEATARP 406
>gi|15965009|ref|NP_385362.1| ATP-dependent protease ATP-binding subunit ClpX [Sinorhizobium
meliloti 1021]
gi|334315799|ref|YP_004548418.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sinorhizobium
meliloti AK83]
gi|384528968|ref|YP_005713056.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sinorhizobium
meliloti BL225C]
gi|384536771|ref|YP_005720856.1| ATP-dependent protease ATP-binding subunit [Sinorhizobium meliloti
SM11]
gi|407720200|ref|YP_006839862.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sinorhizobium
meliloti Rm41]
gi|418402635|ref|ZP_12976143.1| ATP-dependent protease ATP-binding subunit ClpX [Sinorhizobium
meliloti CCNWSX0020]
gi|433613030|ref|YP_007189828.1| endopeptidase Clp ATP-binding regulatory subunit (clpX)
[Sinorhizobium meliloti GR4]
gi|21263475|sp|Q92QQ2.1|CLPX_RHIME RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|15074188|emb|CAC45835.1| Probable ATP-dependent CLP protease ATP-binding subunit
[Sinorhizobium meliloti 1021]
gi|333811144|gb|AEG03813.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sinorhizobium
meliloti BL225C]
gi|334094793|gb|AEG52804.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sinorhizobium
meliloti AK83]
gi|336033663|gb|AEH79595.1| ATP-dependent protease ATP-binding subunit [Sinorhizobium meliloti
SM11]
gi|359503376|gb|EHK75930.1| ATP-dependent protease ATP-binding subunit ClpX [Sinorhizobium
meliloti CCNWSX0020]
gi|407318432|emb|CCM67036.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sinorhizobium
meliloti Rm41]
gi|429551220|gb|AGA06229.1| endopeptidase Clp ATP-binding regulatory subunit (clpX)
[Sinorhizobium meliloti GR4]
Length = 425
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 203/402 (50%), Positives = 272/402 (67%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI K LDE+VIGQ++AK+ IL AV+NHYKR+ H++
Sbjct: 66 VPTPQEIIKVLDEYVIGQQQAKR-----IL----------SVAVHNHYKRLAHAA----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KS + VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KSSD--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGFGA VRA + R G +L ++ DLV +GLIPEFIGR P+L
Sbjct: 261 SARGEKTSIGFGATVRAPEDRRVG---------EVLRELEPEDLVKFGLIPEFIGRLPVL 311
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+ED L+Q+L EPKNAL +QY+++F M +V+L+F +DALR IA++A+ + TGARG
Sbjct: 312 ATLEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELNFHEDALREIARRAIVRKTGARG 371
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E IL + MFE+P + V V++ E V P
Sbjct: 372 LRSIMEKILLDTMFELPTLE----GVREVVISDEVVKGTARP 409
>gi|27380054|ref|NP_771583.1| ATP-dependent protease ATP-binding subunit ClpX [Bradyrhizobium
japonicum USDA 110]
gi|421598922|ref|ZP_16042240.1| ATP-dependent protease ATP-binding subunit ClpX [Bradyrhizobium sp.
CCGE-LA001]
gi|46576546|sp|Q89KG2.1|CLPX_BRAJA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|27353208|dbj|BAC50208.1| ATP-dependent Clp protease ATP-binding subunit [Bradyrhizobium
japonicum USDA 110]
gi|404268967|gb|EJZ33329.1| ATP-dependent protease ATP-binding subunit ClpX [Bradyrhizobium sp.
CCGE-LA001]
Length = 423
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 203/402 (50%), Positives = 265/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKV---------------LSVAVHNHYKRLNHQTKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGFGA V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 258 SARGRSTSIGFGAQVLAPEDRRTG---------EIFRHVEPEDLLKYGLIPEFVGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E L ++L EPKNAL +QY+++F M N++L F D+AL +A+KA+ + TGARG
Sbjct: 309 ATLEDLDETSLKKILTEPKNALVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE IL E MF++P G V V++ +E V P
Sbjct: 369 LRSILEAILLETMFDLP----GLEGVEEVVISREVVEGTARP 406
>gi|126700923|ref|YP_001089820.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile 630]
gi|254976903|ref|ZP_05273375.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile QCD-66c26]
gi|255094289|ref|ZP_05323767.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile CIP 107932]
gi|255102471|ref|ZP_05331448.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile QCD-63q42]
gi|255308376|ref|ZP_05352547.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile ATCC 43255]
gi|255316043|ref|ZP_05357626.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile QCD-76w55]
gi|255518700|ref|ZP_05386376.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile QCD-97b34]
gi|255651822|ref|ZP_05398724.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile QCD-37x79]
gi|255657262|ref|ZP_05402671.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile QCD-23m63]
gi|260684848|ref|YP_003216133.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile CD196]
gi|260688506|ref|YP_003219640.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile R20291]
gi|296451897|ref|ZP_06893614.1| ATP-dependent Clp protease ATP-binding subunit [Clostridium
difficile NAP08]
gi|296879708|ref|ZP_06903683.1| ATP-dependent Clp protease ATP-binding subunit [Clostridium
difficile NAP07]
gi|306521609|ref|ZP_07407956.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile QCD-32g58]
gi|384362517|ref|YP_006200369.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile BI1]
gi|423081792|ref|ZP_17070391.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
difficile 002-P50-2011]
gi|423085911|ref|ZP_17074346.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
difficile 050-P50-2011]
gi|423089386|ref|ZP_17077745.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
difficile 70-100-2010]
gi|123066426|sp|Q180E8.1|CLPX_CLOD6 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|115252360|emb|CAJ70201.1| ATP-dependent Clp protease ATP-binding subunit clpX [Clostridium
difficile 630]
gi|260211011|emb|CBA66322.1| ATP-dependent Clp protease ATP-binding subunit [Clostridium
difficile CD196]
gi|260214523|emb|CBE07037.1| ATP-dependent Clp protease ATP-binding subunit [Clostridium
difficile R20291]
gi|296259279|gb|EFH06157.1| ATP-dependent Clp protease ATP-binding subunit [Clostridium
difficile NAP08]
gi|296429297|gb|EFH15169.1| ATP-dependent Clp protease ATP-binding subunit [Clostridium
difficile NAP07]
gi|357548302|gb|EHJ30168.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
difficile 050-P50-2011]
gi|357549865|gb|EHJ31703.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
difficile 002-P50-2011]
gi|357558183|gb|EHJ39685.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
difficile 70-100-2010]
Length = 416
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 201/408 (49%), Positives = 267/408 (65%), Gaps = 63/408 (15%)
Query: 67 EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSS 126
E LP PKE+ + L+++VIGQE+AKK+ AVYNHYKRIY
Sbjct: 55 EDTTSLPKPKEMMEILNDYVIGQEKAKKA---------------LSVAVYNHYKRIYSK- 98
Query: 127 LQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARI 186
KS + + +E++KSN+LL+GPTGSGKTLLA+TLAR
Sbjct: 99 --------------------KSSSKD------IEIQKSNILLLGPTGSGKTLLAQTLART 132
Query: 187 VNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAES 245
+NVPF + DAT+LT+AGYVGED E++L KL+ AADFD+E A+RGI+YIDE+DKI K+E+
Sbjct: 133 LNVPFAMADATSLTEAGYVGEDVENILLKLIQAADFDIEKAERGIIYIDEIDKIARKSEN 192
Query: 246 RNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVG 305
+ RDVSGEGVQQALLK+LEGTV NVP P G RKHP + + IDT ++LFI GGAF G
Sbjct: 193 PSITRDVSGEGVQQALLKILEGTVANVP-PQGG-RKHPHQEFLKIDTTNVLFILGGAFDG 250
Query: 306 LEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRF 365
LEK I +R D ++GFGA + + L L E V DL+ YG+IPEFIGR
Sbjct: 251 LEKIIQKRGGDKTLGFGAKIESKKE-------LDLGKLYEKVLPEDLLKYGIIPEFIGRI 303
Query: 366 PILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTG 425
P+L +L L+ED L+Q+L EPKNAL +QYKK+ +++V+L F + ALR IAKKA+ +NTG
Sbjct: 304 PVLATLELLDEDALMQILQEPKNALVKQYKKLLELDDVELEFEEGALRAIAKKAIERNTG 363
Query: 426 ARGLRALLENILTEAMFEIP-----------ETKIGTSSVNAVLVDKE 462
ARGLR+++E+++ E MFE+P E + SVN ++V K+
Sbjct: 364 ARGLRSIVESVMMETMFEVPSRDNIKKVIVTEKSVNEDSVNPIIVLKD 411
>gi|408379475|ref|ZP_11177069.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
albertimagni AOL15]
gi|407746959|gb|EKF58481.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
albertimagni AOL15]
Length = 425
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 199/376 (52%), Positives = 262/376 (69%), Gaps = 53/376 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ++AKK IL AV+NHYKR+ H+S
Sbjct: 66 VPTPQDIIKILDEYVIGQKQAKK-----IL----------SVAVHNHYKRLSHAS----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G+ VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KGGD--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+A D +L ++ DLV +GLIPEFIGR P+L +
Sbjct: 261 SARGEKTSIGFGATVKAE-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EPKNAL +QY+++F M +V+L F +DALR IA+KA+ + TGARGLR
Sbjct: 314 LEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELTFHEDALREIARKAITRKTGARGLR 373
Query: 431 ALLENILTEAMFEIPE 446
+++E IL + MFE+PE
Sbjct: 374 SIMEKILLDTMFELPE 389
>gi|384261375|ref|YP_005416561.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhodospirillum
photometricum DSM 122]
gi|378402475|emb|CCG07591.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhodospirillum
photometricum DSM 122]
Length = 446
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 205/402 (50%), Positives = 266/402 (66%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P+P+EI + LD++VIGQ AKK AV+NHYKR+ H
Sbjct: 87 VPSPREIMQVLDDYVIGQHHAKKV---------------LAVAVHNHYKRLSH------- 124
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
V + VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 125 ---------------------VGRNSDVELAKSNILLIGPTGCGKTLLAQTLARILDVPF 163
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 164 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKSDNPSITR 223
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 224 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 281
Query: 311 SERRQDSSIGFGAPVR--ANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + SSIGFGA VR RTG +L +V+ DL+ YGLIPEF+GR P+L
Sbjct: 282 SARGKGSSIGFGADVRDPETRRTG---------EILRNVEPEDLLKYGLIPEFVGRLPVL 332
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+ED LV +L PKNAL +QY+K+F M + L F D+ALR IAKKA+A+ TGARG
Sbjct: 333 ATLDDLDEDALVDILTSPKNALVKQYQKLFEMESTHLSFKDEALRGIAKKAIARKTGARG 392
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E IL + MF++P G S V+ V+V+KE V P
Sbjct: 393 LRSIMEGILLDTMFDLP----GLSGVDEVVVNKEVVDGRSKP 430
>gi|299135042|ref|ZP_07028233.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Afipia sp.
1NLS2]
gi|298590019|gb|EFI50223.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Afipia sp.
1NLS2]
Length = 424
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 202/402 (50%), Positives = 267/402 (66%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKV---------------LSVAVHNHYKRLNHQTKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGLEKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 258 SSRGRTTSIGFAASVLAPEDRRTG---------EIFREVEPEDLLKYGLIPEFVGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E L ++L+EPKNAL +QY+++F M N++L F D+AL +A+KA+ + TGARG
Sbjct: 309 ATLEDLDEASLKKILVEPKNALVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE+IL E MF++P G V V++ +E V + P
Sbjct: 369 LRSILESILLETMFDLP----GLEGVEEVVISREVVEATARP 406
>gi|339503122|ref|YP_004690542.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Roseobacter
litoralis Och 149]
gi|338757115|gb|AEI93579.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Roseobacter
litoralis Och 149]
Length = 421
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 202/414 (48%), Positives = 273/414 (65%), Gaps = 61/414 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPK+IC LD++VIGQ AK+ AV+NHYKR+ H+
Sbjct: 63 VPTPKDICAVLDDYVIGQAMAKRV---------------LSVAVHNHYKRLNHAQ----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G+ +EL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ---------------KGGD--------IELAKSNILLIGPTGCGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +++++VE AQRGIVYIDEVDKI K+E+ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 200 DVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+ R + S++GFGA VR N G + ++ DL+ +GLIPEF+GR P+L +
Sbjct: 258 AARGKGSAMGFGADVRGNDDRG-------VGEIFTDLEPEDLLKFGLIPEFVGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED LV +L +PKNAL +QY+++F + + +L FTDDAL IAK+A+ + TGARGLR
Sbjct: 311 LEDLDEDALVTILTQPKNALVKQYQRLFELEDTELSFTDDALSAIAKRAIERKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELE 484
++LE+IL MFE+P G SV V+V++EAV S AP ++H D E
Sbjct: 371 SILEDILLNTMFELP----GLDSVTEVVVNEEAVNSDAAP----LMIHADASKE 416
>gi|148255922|ref|YP_001240507.1| ATP-dependent protease ATP-binding subunit ClpX [Bradyrhizobium sp.
BTAi1]
gi|166214758|sp|A5EKA7.1|CLPX_BRASB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|146408095|gb|ABQ36601.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bradyrhizobium
sp. BTAi1]
Length = 424
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 200/402 (49%), Positives = 265/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ H + +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKV---------------LSVAVHNHYKRLNHQTKHSD- 106
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 107 ---------------------------VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGLEKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 258 SARGRSTSIGFAAQVLAPEDRRTG---------EIFRHVEPEDLLKYGLIPEFVGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E+ L ++L EPKNAL +QY+++F M N++L F D+AL +A+KA+ + TGARG
Sbjct: 309 ATLEDLDENSLKKILTEPKNALVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE+IL E MF++P G V V++ +E V P
Sbjct: 369 LRSILESILLETMFDLP----GLEGVEEVVISREVVEGTARP 406
>gi|227500203|ref|ZP_03930272.1| ATP dependent protease ATP-binding subunit [Anaerococcus tetradius
ATCC 35098]
gi|227217725|gb|EEI83029.1| ATP dependent protease ATP-binding subunit [Anaerococcus tetradius
ATCC 35098]
Length = 404
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 203/398 (51%), Positives = 262/398 (65%), Gaps = 61/398 (15%)
Query: 68 GNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSL 127
G+++L TPKEI + LD +VIGQ+ AKK+ AVYNHYKRI
Sbjct: 56 GDVELSTPKEIKEFLDSYVIGQDDAKKT---------------LSVAVYNHYKRI----- 95
Query: 128 QKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIV 187
N N E+ EI EL+KSN+L++GPTGSGKTLLA+TLAR +
Sbjct: 96 ----------------------NSNEEDSEI-ELQKSNILMLGPTGSGKTLLAQTLARKL 132
Query: 188 NVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESR 246
NVPF I DAT+LT+AGYVGED E+++ KL+ AAD+D+E A+RGI+Y+DE+DKI K+E+
Sbjct: 133 NVPFAIADATSLTEAGYVGEDVENIILKLVQAADYDIELAERGIIYVDEIDKITRKSENP 192
Query: 247 NNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGL 306
+ RDVSGEGVQQALLK++EGT NVP P G RKHP + I +DT +ILFI GGAF G+
Sbjct: 193 SITRDVSGEGVQQALLKLIEGTEANVP-PQGG-RKHPSQEYIQVDTTNILFILGGAFDGI 250
Query: 307 EKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFP 366
E I+ R + +IGFGA V N + L+ V++ DL+ YGLIPEFIGR P
Sbjct: 251 EDIINRRLSEKTIGFGASVSKNAKAS-----------LKEVNTEDLLKYGLIPEFIGRVP 299
Query: 367 ILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGA 426
I+VSL AL D LVQ+L EPKN+ +QY+K+F ++ VKL F DDAL IAKKA + TGA
Sbjct: 300 IIVSLDALEIDSLVQILKEPKNSFVKQYQKLFELDGVKLTFEDDALYQIAKKAFDQKTGA 359
Query: 427 RGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
RGLR ++EN+L + MFEIP + V+V KE+V
Sbjct: 360 RGLRTIMENLLLDLMFEIP----SIDDLEEVIVTKESV 393
>gi|120554757|ref|YP_959108.1| ATP-dependent protease ATP-binding subunit ClpX [Marinobacter
aquaeolei VT8]
gi|387813880|ref|YP_005429363.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|166214783|sp|A1U1Q2.1|CLPX_MARAV RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|120324606|gb|ABM18921.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Marinobacter
aquaeolei VT8]
gi|381338893|emb|CCG94940.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 427
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 200/414 (48%), Positives = 268/414 (64%), Gaps = 56/414 (13%)
Query: 58 ENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYN 117
E N E + LPTP EI + L+E+VIGQ+RAK + AVYN
Sbjct: 53 EEIQENAPEEASDRLPTPAEIRETLNEYVIGQDRAK---------------VVLSVAVYN 97
Query: 118 HYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKT 177
HYKR+ + E VEL KSN+LL+GPTGSGKT
Sbjct: 98 HYKRLRYG----------------------------EGKSDVELGKSNILLIGPTGSGKT 129
Query: 178 LLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEV 237
LLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+
Sbjct: 130 LLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEI 189
Query: 238 DKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDIL 296
DKI K+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +IL
Sbjct: 190 DKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTGNIL 247
Query: 297 FICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYG 356
FICGGAF GL+K I ER + SSIGF A V++ D+ T ++ V++ DLV +G
Sbjct: 248 FICGGAFAGLDKVIQERSERSSIGFSATVKSQ------DDSKSTGDIIREVETEDLVKFG 301
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
LIPEF+GR P++ +L+ L+E+ LVQ+L EPKNAL +QY+K+F M V+L F +DALR +A
Sbjct: 302 LIPEFVGRLPVVATLTELDEEALVQILTEPKNALTKQYQKLFDMEGVELDFREDALRAVA 361
Query: 417 KKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+KAM + TGARGLR+++E L + M++IP V+ V++D+ + P
Sbjct: 362 RKAMERKTGARGLRSIMEATLLDTMYQIP----SEHDVSKVVIDESVIKGDSEP 411
>gi|148259929|ref|YP_001234056.1| ATP-dependent protease ATP-binding subunit ClpX [Acidiphilium
cryptum JF-5]
gi|326403117|ref|YP_004283198.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acidiphilium
multivorum AIU301]
gi|254763827|sp|A5FX05.1|CLPX_ACICJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|146401610|gb|ABQ30137.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acidiphilium
cryptum JF-5]
gi|325049978|dbj|BAJ80316.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acidiphilium
multivorum AIU301]
Length = 418
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 203/405 (50%), Positives = 275/405 (67%), Gaps = 61/405 (15%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
NR + +PTP+EICK LD++VIGQ+ AK+ IL AV+NHYK
Sbjct: 51 NRTHLVKTRDGVPTPREICKVLDDYVIGQDHAKR-----IL----------SVAVHNHYK 95
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
R+ H+ QK ND +E+ KSN++L+GPTGSGKTLLA
Sbjct: 96 RLAHA--QKN------------------------ND--IEIAKSNIMLVGPTGSGKTLLA 127
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+TLARI++VPFT+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI
Sbjct: 128 QTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKI 187
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K+++ + RDVSGEGVQQALLK++EGTV +V P G RKHP+ + + +DT +ILFIC
Sbjct: 188 SRKSDNPSITRDVSGEGVQQALLKIMEGTVASV--PPQGGRKHPQQEFLQVDTTNILFIC 245
Query: 300 GGAFVGLEKTISERRQDSSIGFGAPVR--ANMRTGGLTDALVTSSLLESVDSGDLVAYGL 357
GGAF GLEK I++R + S IGFGA VR RTG ++L V+ DL+ +GL
Sbjct: 246 GGAFAGLEKIIAQRGKGSGIGFGADVRDPTEQRTG---------AILREVEPEDLLKFGL 296
Query: 358 IPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAK 417
IPEFIGR P++ +L L+E L+++L +PKNAL +QY ++F M VKL+FT+DAL+++A
Sbjct: 297 IPEFIGRLPVVATLEDLDEAALIEILTKPKNALVKQYGRLFEMEGVKLNFTEDALKVVAA 356
Query: 418 KAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKE 462
+A+ + TGARGLR+++ENIL E MF++P G SV V+++ E
Sbjct: 357 RAIQRKTGARGLRSIMENILLETMFDLP----GLDSVEEVVINGE 397
>gi|335042769|ref|ZP_08535796.1| ATP-dependent protease Clp, ATPase subunit [Methylophaga
aminisulfidivorans MP]
gi|333789383|gb|EGL55265.1| ATP-dependent protease Clp, ATPase subunit [Methylophaga
aminisulfidivorans MP]
Length = 423
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 198/405 (48%), Positives = 266/405 (65%), Gaps = 56/405 (13%)
Query: 67 EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSS 126
E LPTP+EI LD +VIGQERAK+ Y+ AVYNHYKR+ +
Sbjct: 58 EAESKLPTPREINDALDNYVIGQERAKR------------YL---SVAVYNHYKRLRTA- 101
Query: 127 LQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARI 186
N +ND VEL KSN+LL+GPTGSGKTLLA+TLAR
Sbjct: 102 -------------------------NKDND--VELSKSNILLIGPTGSGKTLLAETLARQ 134
Query: 187 VNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAES 245
+NVPFT+ DAT LT+AGYVGED E+++ KLL D+DV+ A+ GIVYIDE+DKI K+++
Sbjct: 135 LNVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAETGIVYIDEIDKISRKSDN 194
Query: 246 RNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVG 305
+ RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT ILFICGGAF G
Sbjct: 195 PSITRDVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAG 252
Query: 306 LEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRF 365
L+K I R Q IGF A +++ + D S L +V+ DL+ YGLIPEF+GR
Sbjct: 253 LDKVIRNRTQKGGIGFSAELKS------VDDNKPLSESLRTVEPEDLIQYGLIPEFVGRL 306
Query: 366 PILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTG 425
P++ +L L+E LVQ+L EPKNAL +QY+++F+M N +L F DDALR IA+KAM + TG
Sbjct: 307 PVVATLDELDEKALVQILTEPKNALTKQYQQLFNMENAELEFRDDALRAIARKAMERKTG 366
Query: 426 ARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
ARGLR+++EN+L + MFE+P +V+ V++D+ + ++P
Sbjct: 367 ARGLRSIIENVLLDTMFELP----SADNVSKVVIDESVIAGENSP 407
>gi|414162391|ref|ZP_11418638.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Afipia felis
ATCC 53690]
gi|410880171|gb|EKS28011.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Afipia felis
ATCC 53690]
Length = 424
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 202/402 (50%), Positives = 267/402 (66%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKV---------------LSVAVHNHYKRLNHQTKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGLEKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 258 SSRGRTTSIGFAASVLAPEDRRTG---------EIFREVEPEDLLKYGLIPEFVGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E L ++L+EPKNAL +QY+++F M N++L F D+AL +A+KA+ + TGARG
Sbjct: 309 ATLEDLDEASLKKILVEPKNALVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE+IL E MF++P G V V++ +E V + P
Sbjct: 369 LRSILESILLETMFDLP----GLEGVEEVVISREVVEATARP 406
>gi|255321157|ref|ZP_05362323.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
radioresistens SK82]
gi|421855045|ref|ZP_16287427.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
gi|255301711|gb|EET80962.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
radioresistens SK82]
gi|403189545|dbj|GAB73628.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
Length = 438
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 194/391 (49%), Positives = 262/391 (67%), Gaps = 49/391 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+ S
Sbjct: 60 LPKPHEIRAALDQYVIGQDIAKKT---------------LSVAVYNHYKRLKVSQ----- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+G K+ ++ VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 100 ------------NGQKT-------EDKVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+D+E AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 141 AMADATTLTEAGYVGEDVENIVQKLLQKADYDIEKAQKGIIYIDEIDKITRKSENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I +DT ++LFICGGAF GLEK +
Sbjct: 201 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQVDTSNVLFICGGAFSGLEKIV 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R++ IGF A V++ T L + L V+ DLV +GLIPEFIGR P++ +
Sbjct: 259 QHRQEKGGIGFTAEVKSKDETKKLAE------LFRQVEPADLVKFGLIPEFIGRLPVIAT 312
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EPKNAL RQY+ +F+M +V L F D ALR +AKKA+ +NTGARGLR
Sbjct: 313 LEELDEDALMQILTEPKNALTRQYQYLFNMEDVDLVFEDSALRAVAKKALERNTGARGLR 372
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVD 460
++LEN+L E M+++P +GT +N +++
Sbjct: 373 SILENVLLETMYDLPSRNDVGTVVINEAVIN 403
>gi|39936025|ref|NP_948301.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodopseudomonas
palustris CGA009]
gi|192291680|ref|YP_001992285.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodopseudomonas
palustris TIE-1]
gi|61211520|sp|Q6N5L4.1|CLPX_RHOPA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|229484081|sp|B3Q7P4.1|CLPX_RHOPT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|39649879|emb|CAE28401.1| ATP-dependent Clp protease ATP binding subunit ClpX
[Rhodopseudomonas palustris CGA009]
gi|192285429|gb|ACF01810.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodopseudomonas palustris TIE-1]
Length = 424
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 202/402 (50%), Positives = 266/402 (66%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKV---------------LSVAVHNHYKRLNHQTKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 258 SSRGRTTSIGFAAQVLAPEDRRTG---------EIFRHVEPEDLLKYGLIPEFVGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E+ L ++L +PKNAL +QY+++F M NV+L F D+AL +A+KA+ + TGARG
Sbjct: 309 ATLEDLDENSLKKILTDPKNALVKQYQRLFEMENVELTFADEALGAVARKAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE+IL E MF++P G V V++ +E V P
Sbjct: 369 LRSILESILLETMFDLP----GLEGVEEVVISREVVDGTARP 406
>gi|262373454|ref|ZP_06066732.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
junii SH205]
gi|262311207|gb|EEY92293.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
junii SH205]
Length = 436
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 262/400 (65%), Gaps = 53/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKT---------------LSVAVYNHYKRL--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G + + +I E+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 96 ---------------KVGQTHHAHQDI-EIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 140 AMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK +
Sbjct: 200 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFSGLEKIV 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ D+ S L V++ DLV +GLIPEFIGR P++ +
Sbjct: 258 QQRQEKGGIGFTADVKNK------DDSKKVSELFRQVEATDLVKFGLIPEFIGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F+M +V L F + ALR +AKKA+ +NTGARGLR
Sbjct: 312 LDELDEEALMQILTEPKNALTRQYQYLFTMEDVDLVFDESALRAVAKKALERNTGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LEN+L E M+++P K V V+VD+ + P
Sbjct: 372 SILENVLLETMYDLPSRK----DVGTVIVDEAVINGTAKP 407
>gi|162148814|ref|YP_001603275.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconacetobacter
diazotrophicus PAl 5]
gi|209545438|ref|YP_002277667.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconacetobacter
diazotrophicus PAl 5]
gi|189044136|sp|A9HRV3.1|CLPX_GLUDA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|161787391|emb|CAP56986.1| ATP-dependent Clp protease ATP-binding subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533115|gb|ACI53052.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Gluconacetobacter diazotrophicus PAl 5]
Length = 419
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 203/400 (50%), Positives = 272/400 (68%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ HS QK
Sbjct: 62 VPTPKEICKVLDDYVIGQFYAKKV---------------LSVAVHNHYKRLAHS--QKN- 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VE+ KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 104 -----------------------ND--VEIAKSNILLVGPTGSGKTLLAQTLARILDVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 139 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ++LFICGGAF GL+K I
Sbjct: 199 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNMLFICGGAFAGLDKII 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + S IGFGA V++ D T ++L V+ DL+ +GLIPEFIGR P++ +
Sbjct: 257 SARGKGSGIGFGADVQS-------PDERRTGAILRDVEPEDLLKFGLIPEFIGRLPVVAT 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+++L +PKNAL +QY ++F M VKL FTDDAL+ +A +A+A+ TGARGLR
Sbjct: 310 LEDLDEAALIEILTKPKNALVKQYARLFQMEGVKLTFTDDALKQVALRAIARRTGARGLR 369
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
A++E+IL MF++P G +V+ V+++K+ S +P
Sbjct: 370 AIMESILLSTMFDLP----GLENVDEVVINKDVAESKTSP 405
>gi|350552165|ref|ZP_08921371.1| ATP-dependent Clp protease ATP-binding subunit clpX [Thiorhodospira
sibirica ATCC 700588]
gi|349795030|gb|EGZ48836.1| ATP-dependent Clp protease ATP-binding subunit clpX [Thiorhodospira
sibirica ATCC 700588]
Length = 427
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 198/394 (50%), Positives = 266/394 (67%), Gaps = 54/394 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI K LDE+VIGQERAKK AVYNHYKR+
Sbjct: 64 LPKPHEIKKILDEYVIGQERAKKV---------------LSVAVYNHYKRL--------- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G + ++D VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 100 ---------------EAGAVHAKDD--VELAKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTHNILFICGGAFAGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + S IGF A V++ + L+DA +LL +++ DLV YGLIPEF+GR P+L +
Sbjct: 261 RDRTEKSGIGFSAEVKS--KRSSLSDA----ALLNHIEAEDLVKYGLIPEFVGRLPVLAN 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E LVQ+L EP+NAL +QY+K+F M V + F +DALR +++KAM + TGARGLR
Sbjct: 315 LEELDEAALVQILTEPRNALTKQYQKLFKMEGVDIEFREDALRCVSRKAMDRKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+LE +L + M+++P +V+ V++D+ +
Sbjct: 375 TILEQVLLDTMYDLP----SIDNVSKVVIDEAVI 404
>gi|329121862|ref|ZP_08250477.1| ATP-dependent Clp protease ATP-binding subunit [Dialister
micraerophilus DSM 19965]
gi|327467800|gb|EGF13292.1| ATP-dependent Clp protease ATP-binding subunit [Dialister
micraerophilus DSM 19965]
Length = 411
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 197/383 (51%), Positives = 260/383 (67%), Gaps = 51/383 (13%)
Query: 67 EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSS 126
E LPTP EI + +D++VI QE AK I AVYNHYKRI +
Sbjct: 56 EEEFKLPTPVEIKEYMDQYVIDQEEAK---------------IALAVAVYNHYKRIKYE- 99
Query: 127 LQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARI 186
K G ND+ VEL+KSN++++GPTGSGKTLLA+TLAR
Sbjct: 100 --------------------KDGG----NDD-VELQKSNIIMLGPTGSGKTLLAQTLARF 134
Query: 187 VNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAES 245
++VPF I+DAT LT+AGYVGED E++L +L+ AAD+D+E A+RGIVYIDE+DKI K+E+
Sbjct: 135 LDVPFAISDATTLTEAGYVGEDVENILLRLIQAADYDLEKAERGIVYIDEIDKIARKSEN 194
Query: 246 RNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVG 305
+ RDVSGEGVQQALLK+LEGTV NVP P G RKHP + I +DT ILFICGGAF G
Sbjct: 195 PSITRDVSGEGVQQALLKILEGTVANVP-PQGG-RKHPNQEMIQLDTSKILFICGGAFAG 252
Query: 306 LEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRF 365
++K +++R S++GFGA ++ + +L V+ DL+ +GLIPEFIGR
Sbjct: 253 MDKVVAKRLTKSAVGFGADIKKKEEKD-------VAKILNMVEPEDLLKFGLIPEFIGRL 305
Query: 366 PILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTG 425
PILV+LS L+ED LV++L +PKNAL +QYKK+ M+NV+L F + A+R IAKKA+ +NTG
Sbjct: 306 PILVALSPLSEDALVRILTQPKNALIKQYKKLLKMDNVELEFEEKAIRAIAKKAIERNTG 365
Query: 426 ARGLRALLENILTEAMFEIPETK 448
ARGLRA++E I+ + M++IPE K
Sbjct: 366 ARGLRAIIEKIMQKVMYDIPEMK 388
>gi|258542725|ref|YP_003188158.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-01]
gi|384042646|ref|YP_005481390.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-12]
gi|384051163|ref|YP_005478226.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-03]
gi|384054271|ref|YP_005487365.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-07]
gi|384057505|ref|YP_005490172.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-22]
gi|384060146|ref|YP_005499274.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-26]
gi|384063438|ref|YP_005484080.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-32]
gi|384119448|ref|YP_005502072.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256633803|dbj|BAH99778.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-01]
gi|256636862|dbj|BAI02831.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-03]
gi|256639915|dbj|BAI05877.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-07]
gi|256642971|dbj|BAI08926.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-22]
gi|256646026|dbj|BAI11974.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-26]
gi|256649079|dbj|BAI15020.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-32]
gi|256652066|dbj|BAI18000.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655123|dbj|BAI21050.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-12]
Length = 421
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 272/400 (68%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EICK LD++VIGQ +AKK AV+NHYKR+ +
Sbjct: 62 VPTPREICKVLDDYVIGQAQAKKV---------------LSVAVHNHYKRLTQVA----- 101
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G+ VE+ KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 102 ---------------KAGD--------VEIAKSNILLIGPTGSGKTLLAQTLARILDVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 139 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISKKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ++LFICGGAF GL+K I
Sbjct: 199 DVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNMLFICGGAFAGLDKII 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + ++IGFGA VRA D T +L V+ DL+ +GLIPEFIGR P++ +
Sbjct: 257 SARGKGTNIGFGADVRA-------PDERKTGEILHDVEPEDLMKFGLIPEFIGRLPVIAT 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+++L EPKNAL +QY+++F M NV+L+FTDDAL+ IA +A+ + TGARGLR
Sbjct: 310 LGDLDEAALIKILTEPKNALVKQYQRLFQMENVQLNFTDDALKAIADRAIVRKTGARGLR 369
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE+IL MF++P G +V V+V+++ +P
Sbjct: 370 SILESILMSTMFDLP----GLENVEEVVVNRDVAEGKASP 405
>gi|83943112|ref|ZP_00955572.1| ATP-dependent protease ATP-binding subunit [Sulfitobacter sp.
EE-36]
gi|83954270|ref|ZP_00962990.1| ATP-dependent protease ATP-binding subunit [Sulfitobacter sp.
NAS-14.1]
gi|83841307|gb|EAP80477.1| ATP-dependent protease ATP-binding subunit [Sulfitobacter sp.
NAS-14.1]
gi|83846120|gb|EAP83997.1| ATP-dependent protease ATP-binding subunit [Sulfitobacter sp.
EE-36]
Length = 421
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 203/414 (49%), Positives = 274/414 (66%), Gaps = 61/414 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPK+IC LD++VIGQ AK+ AV+NHYKR+ H+
Sbjct: 63 VPTPKDICDVLDDYVIGQAMAKRV---------------LSVAVHNHYKRLNHAQ----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G+ +EL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ---------------KGGD--------IELAKSNILLIGPTGCGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K+E+ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL++ I
Sbjct: 200 DVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDRII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+ R + S++GFGA VR DA + ++ DL+ +GLIPEF+GR P+L +
Sbjct: 258 AARGKGSAMGFGADVRDQ-------DARGIGEIFTDLEPEDLLKFGLIPEFVGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED LV +L EPKNAL +QY+++F + + +L FTDDAL IAK+A+ + TGARGLR
Sbjct: 311 LEDLDEDALVTILTEPKNALVKQYQRLFEIEDTQLTFTDDALLAIAKRAIERKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELE 484
++LE+IL MF++P G SV V+V++EAV S AP ++H D E E
Sbjct: 371 SILEDILLNTMFDLP----GMDSVTEVVVNEEAVTSDAAP----LMIHADAEKE 416
>gi|365888481|ref|ZP_09427243.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. STM 3809]
gi|365335846|emb|CCD99774.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. STM 3809]
Length = 380
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 199/402 (49%), Positives = 265/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ H + +
Sbjct: 19 IPTPKEICKVLDDYVIGQNHAKKV---------------LSVAVHNHYKRLNHQTKHSD- 62
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 63 ---------------------------VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 95
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 96 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 155
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 156 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGLEKII 213
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 214 SARGRSTSIGFAAQVLAPEDRRTG---------EIFRHVEPEDLLKYGLIPEFVGRLPVV 264
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E+ L ++L EPKNAL +QY+++F M N++L F D+AL +++KA+ + TGARG
Sbjct: 265 ATLEDLDENSLKKILTEPKNALVKQYQRLFEMENIELTFADEALGAVSRKAIERKTGARG 324
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE+IL E MF++P G V V++ +E V P
Sbjct: 325 LRSILESILLETMFDLP----GLEGVEEVVISREVVEGTARP 362
>gi|389690969|ref|ZP_10179862.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Microvirga
sp. WSM3557]
gi|388589212|gb|EIM29501.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Microvirga
sp. WSM3557]
Length = 422
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 200/394 (50%), Positives = 266/394 (67%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEI + LD++VIGQE AKK AV+NHYKR+ H++
Sbjct: 63 VPTPKEISRVLDDYVIGQEHAKKV---------------LSVAVHNHYKRLAHATKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLE+ I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+A D T + SV+ DL+ +GLIPEF+GR P+L +
Sbjct: 258 SGRGKGTSIGFGATVQA-------PDDRRTGEIFRSVEPEDLLKFGLIPEFVGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L ++L EPKNAL +QY+++F M NV L F D+AL +IA+KA+ + TGARGLR
Sbjct: 311 LEDLDEEALKKILQEPKNALVKQYQRLFEMENVSLTFQDEALSMIARKAIERKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E IL E M+++P G SV V++ E V
Sbjct: 371 SIMEGILLETMYDLP----GLDSVEQVVIGPEVV 400
>gi|262380155|ref|ZP_06073310.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
radioresistens SH164]
gi|262298349|gb|EEY86263.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
radioresistens SH164]
Length = 438
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 194/391 (49%), Positives = 262/391 (67%), Gaps = 49/391 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+ S
Sbjct: 60 LPKPHEIRAALDQYVIGQDIAKKT---------------LSVAVYNHYKRLKVSQ----- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+G K+ ++ VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 100 ------------NGHKT-------EDKVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+D+E AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 141 AMADATTLTEAGYVGEDVENIVQKLLQKADYDIEKAQKGIIYIDEIDKITRKSENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I +DT ++LFICGGAF GLEK +
Sbjct: 201 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQVDTSNVLFICGGAFSGLEKIV 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R++ IGF A V++ T L + L V+ DLV +GLIPEFIGR P++ +
Sbjct: 259 QHRQEKGGIGFTAEVKSKDETKKLAE------LFRQVEPADLVKFGLIPEFIGRLPVIAT 312
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EPKNAL RQY+ +F+M +V L F D ALR +AKKA+ +NTGARGLR
Sbjct: 313 LEELDEDALMQILTEPKNALTRQYQYLFNMEDVDLVFEDSALRTVAKKALERNTGARGLR 372
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVD 460
++LEN+L E M+++P +GT +N +++
Sbjct: 373 SILENVLLETMYDLPSRNDVGTVVINEAVIN 403
>gi|417860287|ref|ZP_12505343.1| ATP-dependent protease ATP-binding subunit [Agrobacterium
tumefaciens F2]
gi|418296069|ref|ZP_12907913.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
tumefaciens CCNWGS0286]
gi|338823351|gb|EGP57319.1| ATP-dependent protease ATP-binding subunit [Agrobacterium
tumefaciens F2]
gi|355539501|gb|EHH08739.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
tumefaciens CCNWGS0286]
Length = 425
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 202/400 (50%), Positives = 271/400 (67%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ++AKK IL AV+NHYKR+ H+S
Sbjct: 66 VPTPQDIIKILDEYVIGQKQAKK-----IL----------SVAVHNHYKRLAHAS----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G+ VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KNGD--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+A D +L ++ DLV +GLIPEFIGR P+L +
Sbjct: 261 SARGEKTSIGFGATVKAE-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EPKNAL +QY+++F M +V+L F +DALR IA+KA+ + TGARGLR
Sbjct: 314 LEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELTFHEDALREIARKAITRKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+++E IL + MFE+P + V V++ + V V P
Sbjct: 374 SIMEKILLDTMFELPTLE----GVREVVISNDVVSGVARP 409
>gi|15888589|ref|NP_354270.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
fabrum str. C58]
gi|335035105|ref|ZP_08528448.1| ATP-dependent protease ATP-binding subunit [Agrobacterium sp. ATCC
31749]
gi|23813866|sp|Q8UFY5.1|CLPX_AGRT5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|15156307|gb|AAK87055.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
fabrum str. C58]
gi|333793536|gb|EGL64890.1| ATP-dependent protease ATP-binding subunit [Agrobacterium sp. ATCC
31749]
Length = 425
Score = 367 bits (942), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 202/400 (50%), Positives = 271/400 (67%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ++AKK IL AV+NHYKR+ H+S
Sbjct: 66 VPTPQDIIKILDEYVIGQKQAKK-----IL----------SVAVHNHYKRLAHAS----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G+ VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KNGD--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+A D +L ++ DLV +GLIPEFIGR P+L +
Sbjct: 261 SARGEKTSIGFGATVKAE-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EPKNAL +QY+++F M +V+L F +DALR IA++A+ + TGARGLR
Sbjct: 314 LEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELTFHEDALREIARRAITRKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+++E IL + MFE+P + V V++ + V V P
Sbjct: 374 SIMEKILLDTMFELPTLE----GVREVVISNDVVSGVARP 409
>gi|85704730|ref|ZP_01035831.1| ATP-dependent protease ATP-binding subunit [Roseovarius sp. 217]
gi|85670548|gb|EAQ25408.1| ATP-dependent protease ATP-binding subunit [Roseovarius sp. 217]
Length = 422
Score = 367 bits (942), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 207/436 (47%), Positives = 285/436 (65%), Gaps = 73/436 (16%)
Query: 36 EIMGGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKS 95
E+ IR++ ++ GI+S SEG +P P++ICK LD++VIGQ RAKK
Sbjct: 42 ELCMDIIREETKTAGIKS------------SEG---IPAPRDICKVLDDYVIGQARAKKV 86
Query: 96 HIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEN 155
AV+NHYKR+ +S SD
Sbjct: 87 ---------------LSVAVHNHYKRLNNSG-----KSD--------------------- 105
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
+EL KSN+LL+GPTG GKTLLA+TLARI++VPFT+ DAT LT+AGYVGED E+++ K
Sbjct: 106 ---IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILK 162
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
LL +++++VE AQRGIVYIDEVDKI K+E+ + RDVSGEGVQQALLK++EGTV VP
Sbjct: 163 LLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVAAVP- 221
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
P G RKHP+ + + +DT +ILFICGGAF GL+K I++R + S++GFGA VR N
Sbjct: 222 PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRDN------ 274
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
DA + ++ DL+ +GLIPEF+GR P++ +L L+ED LV +L +PKNAL +QY
Sbjct: 275 -DARGIGEIFTDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALVTILTQPKNALVKQY 333
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSV 454
+++F + +L FTDDAL+ I+K+A+A+ TGARGLR++LE+IL + MF++P + V
Sbjct: 334 QRLFELEGAQLSFTDDALKAISKRAIARKTGARGLRSILEDILLDTMFDLPSME----HV 389
Query: 455 NAVLVDKEAVGSVDAP 470
VLV++EAV S AP
Sbjct: 390 EEVLVNEEAVNSDAAP 405
>gi|456354944|dbj|BAM89389.1| ATP-dependent protease ATP-binding subunit ClpX [Agromonas
oligotrophica S58]
Length = 424
Score = 367 bits (941), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 200/402 (49%), Positives = 264/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ H + +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKV---------------LSVAVHNHYKRLNHQTKHSD- 106
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 107 ---------------------------VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGLEKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 258 SARGRSTSIGFAAQVLAPEDRRTG---------EIFRHVEPEDLLKYGLIPEFVGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E L ++L EPKNAL +QY+++F M N++L F D+AL +A+KA+ + TGARG
Sbjct: 309 ATLEDLDETSLKKILTEPKNALVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE+IL E MF++P G V V++ +E V P
Sbjct: 369 LRSILESILLETMFDLP----GLEGVEEVVISREVVEGTARP 406
>gi|254477070|ref|ZP_05090456.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ruegeria sp.
R11]
gi|214031313|gb|EEB72148.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ruegeria sp.
R11]
Length = 422
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 200/414 (48%), Positives = 275/414 (66%), Gaps = 60/414 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPK+IC+ LD++VIGQ AK+ AV+NHYKR+ H+
Sbjct: 63 VPTPKDICEVLDDYVIGQAMAKRV---------------LSVAVHNHYKRLNHAQ----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+GN +EL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ---------------KAGN-------DIELSKSNILLIGPTGCGKTLLAQTLARILDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K+E+ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + S++GFGA VR G + ++ DL+ +GLIPEF+GR P+L +
Sbjct: 259 KQRGKGSAMGFGADVREESDAG-------VGETFKDLEPEDLLKFGLIPEFVGRLPVLAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+ +L +PKNAL +QY+++F + + +L FTD+AL IAK+A+ + TGARGLR
Sbjct: 312 LEDLDEDALITILTKPKNALVKQYQRLFELEDTELDFTDEALSAIAKRAIERKTGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELE 484
++LE+IL + MF++P G SV V+V++EAV S P ++H D E E
Sbjct: 372 SILEDILLDTMFDLP----GMESVEKVVVNEEAVTSDAQP----LMIHADAEKE 417
>gi|194595679|gb|ACF77122.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum
brasilense]
Length = 422
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 201/394 (51%), Positives = 269/394 (68%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I LD++VIGQ AK+ AV+NHYKR+ H
Sbjct: 63 VPTPRDIHAVLDDYVIGQHHAKRV---------------LSVAVHNHYKRLAH------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G K ND VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 101 -------------GTK------HND--VELAKSNILLVGPTGCGKTLLAQTLARIIDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTSNILFICGGAFAGLDKII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
++R + +SIGFGA VR D T +L V+ DL+ +GLIPEFIGR P++ +
Sbjct: 258 AQRGKGTSIGFGADVRG-------PDERSTGDILREVEPEDLLKFGLIPEFIGRLPVVAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
LS L+E LV++L +PKNAL +QY+++F M +V+L F+DDALR I+ KA+ + TGARGLR
Sbjct: 311 LSDLDETALVEILTKPKNALVKQYQRLFEMEDVRLEFSDDALRTISHKAIQRKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E+IL + MF++P G S V ++LV+KE V
Sbjct: 371 SIMESILLDPMFDLP----GLSGVESILVNKEVV 400
>gi|414173787|ref|ZP_11428414.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Afipia
broomeae ATCC 49717]
gi|410890421|gb|EKS38220.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Afipia
broomeae ATCC 49717]
Length = 424
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 201/402 (50%), Positives = 267/402 (66%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ+ AKK AV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQQHAKKV---------------LSVAVHNHYKRLNHQTKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGLEKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 258 SSRGRTTSIGFAAQVLAPEDRRTG---------EIFREVEPEDLLKYGLIPEFVGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E L ++L +PKNAL +QY+++F M N++L F D+AL +A+KA+ + TGARG
Sbjct: 309 ATLEDLDEASLKKILTDPKNALVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE+IL E MF++P G V V++ +E V + P
Sbjct: 369 LRSILESILLETMFDLP----GLEGVEEVVISREVVEATARP 406
>gi|51891497|ref|YP_074188.1| ATP-dependent protease ATP-binding subunit ClpX [Symbiobacterium
thermophilum IAM 14863]
gi|61211457|sp|Q67SJ9.1|CLPX_SYMTH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|51855186|dbj|BAD39344.1| ATP-dependent Clp protease ATP-binding subunit [Symbiobacterium
thermophilum IAM 14863]
Length = 424
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 200/401 (49%), Positives = 268/401 (66%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P P EI LD++VIGQERAK++ AVYNHYKRI
Sbjct: 61 DVPKPAEIKAILDQYVIGQERAKRT---------------LAVAVYNHYKRIN------- 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
LGS + VEL+KSN+L++GPTGSGKTLLA+TLARI+NVP
Sbjct: 99 -----------LGSKLDD----------VELQKSNILMLGPTGSGKTLLAQTLARILNVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E A+RGIVYIDEVDKI K+E+ +
Sbjct: 138 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAERGIVYIDEVDKIARKSENPSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ +VP P G RKHP + I I+T +ILFICGGAF G++K
Sbjct: 198 RDVSGEGVQQALLKILEGTIASVP-PQGG-RKHPHQEFIQINTTNILFICGGAFDGIDKI 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I+ R S +GFGA +R+ LL+ + DL+ +GLIPEFIGR PI+V
Sbjct: 256 IANRVGRSGLGFGADIRSKQEQN-------VGELLKQIMPEDLLKFGLIPEFIGRLPIVV 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+ED LV++L EPKNAL +QY+K+ ++N++L F ++A+R IAK+A+ +NTGARGL
Sbjct: 309 TLDALDEDALVRILREPKNALVKQYQKLLQLDNIELEFEEEAVRAIAKEALRRNTGARGL 368
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA++E+I+T+ M+E+P + V ++ K+ V P
Sbjct: 369 RAIIEDIMTDVMYEVP----SRTDVTKCVITKDVVLKKQEP 405
>gi|384250570|gb|EIE24049.1| ClpX, ATPase regulatory subunit [Coccomyxa subellipsoidea C-169]
Length = 570
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 199/392 (50%), Positives = 264/392 (67%), Gaps = 53/392 (13%)
Query: 60 GNRNRNSEGNIDL------PTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACC 113
G+ + +EG+ L PTP++I LD+F++GQE KK+
Sbjct: 177 GSTSSTAEGSYRLWDPSKVPTPRKIVAALDKFIVGQEATKKTLAV--------------- 221
Query: 114 AVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTG 173
AVYNHY R+ H +++ + VELEKSNVLL+GPTG
Sbjct: 222 AVYNHYMRVAHEEQRRKRA----------------------QERQVELEKSNVLLLGPTG 259
Query: 174 SGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVY 233
+GKTLLAKTLAR+V VPF + DAT LTQAGYVG+D ES+LYKLL + ++++ AQRGIV
Sbjct: 260 TGKTLLAKTLARLVEVPFAMADATTLTQAGYVGDDVESILYKLLQSCSYNLQVAQRGIV- 318
Query: 234 IDEVDKIVK-AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDT 292
DKIVK +E+ + RDVSGEGVQQALLKMLEGTV+NVP + G RK+PRGD + +DT
Sbjct: 319 ----DKIVKKSENISITRDVSGEGVQQALLKMLEGTVMNVP--EKGGRKNPRGDFLQVDT 372
Query: 293 KDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDL 352
KDILFICGGAF+GL++ ++ER SSIGFG PVRA ++ G V+S++L+ V+ DL
Sbjct: 373 KDILFICGGAFIGLDRQVAERTAMSSIGFGNPVRAKIQ--GFGQPKVSSNVLKQVEQTDL 430
Query: 353 VAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDAL 412
+ YGLIPEF+GRFPI+ SL AL ED+L++VL P+NAL RQY+ MF M++V LH T A
Sbjct: 431 IQYGLIPEFVGRFPIISSLQALTEDELMEVLTRPRNALSRQYEAMFGMSSVGLHLTQTAT 490
Query: 413 RLIAKKAMAKNTGARGLRALLENILTEAMFEI 444
R IA+ A+ + TGARGLR+++E +L M+E+
Sbjct: 491 RAIARAALERGTGARGLRSIMEGLLQPVMYEV 522
>gi|86357225|ref|YP_469117.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium etli CFN
42]
gi|190891273|ref|YP_001977815.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium etli
CIAT 652]
gi|417110579|ref|ZP_11963749.1| ATP-dependent protease ATP-binding subunit [Rhizobium etli
CNPAF512]
gi|421587069|ref|ZP_16032522.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium sp.
Pop5]
gi|123512322|sp|Q2K9U6.1|CLPX_RHIEC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238692521|sp|B3PVY5.1|CLPX_RHIE6 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|86281327|gb|ABC90390.1| ATP-dependent Clp protease, ATP-binding subunit protein [Rhizobium
etli CFN 42]
gi|190696552|gb|ACE90637.1| ATP-dependent Clp protease protein, ATP-binding subunit [Rhizobium
etli CIAT 652]
gi|327188466|gb|EGE55680.1| ATP-dependent protease ATP-binding subunit [Rhizobium etli
CNPAF512]
gi|403708547|gb|EJZ23213.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium sp.
Pop5]
Length = 425
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 202/394 (51%), Positives = 268/394 (68%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ +AKK IL AV+NHYKR+ H+S
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKK-----IL----------SVAVHNHYKRLAHAS----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KNGE--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+A D +L ++ DLV +GLIPEFIGR P+L +
Sbjct: 261 SARGEKTSIGFGATVKAQ-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EPKNAL +QY+++F M +V+L F +DALR IA+KA+ + TGARGLR
Sbjct: 314 LEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELTFHEDALREIARKAIVRKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E IL + MFE+P + V V++ +E V
Sbjct: 374 SIMEKILLDTMFELPTLE----GVREVVISEEVV 403
>gi|163746711|ref|ZP_02154068.1| ATP-dependent protease ATP-binding subunit [Oceanibulbus indolifex
HEL-45]
gi|161379825|gb|EDQ04237.1| ATP-dependent protease ATP-binding subunit [Oceanibulbus indolifex
HEL-45]
Length = 422
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 201/412 (48%), Positives = 274/412 (66%), Gaps = 61/412 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++IC LD++VIGQ AK+ AV+NHYKR+ H+
Sbjct: 63 VPTPRDICGVLDDYVIGQAMAKRV---------------LSVAVHNHYKRLNHAQ----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G+ +EL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ---------------KGGD--------IELAKSNILLIGPTGCGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +++++VE AQRGIVYIDEVDKI K+E+ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 200 DVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+ R + S++GFGA VR N DA + ++ DL+ +GLIPEF+GR P+L +
Sbjct: 258 AARGKGSAMGFGADVRDN-------DARGIGEIFTDLEPEDLLKFGLIPEFVGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED LV +L EPKNAL +QY+++F + + +L FTDDAL IAK+A+ + TGARGLR
Sbjct: 311 LEDLDEDALVTILTEPKNALVKQYQRLFELEDTQLTFTDDALTAIAKRAIERKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGE 482
++LE+IL + MFE+P G +V V+V++EAV S P ++H D E
Sbjct: 371 SILEDILLDTMFELP----GLDTVTEVVVNEEAVMSEAKP----LMIHADSE 414
>gi|406035384|ref|ZP_11042748.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
parvus DSM 16617 = CIP 108168]
Length = 436
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 202/408 (49%), Positives = 266/408 (65%), Gaps = 55/408 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+ K
Sbjct: 60 LPKPHEIRAALDQYVIGQDIAKKT---------------LSVAVYNHYKRL------KVG 98
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
S H + D VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 99 QSHHKHQD-------------------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 140 AMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK +
Sbjct: 200 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFSGLEKIV 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ D S L V++ DLV +GLIPEFIGR P++ +
Sbjct: 258 QQRQEKGGIGFTADVKNK------DDRKKISELFRQVEATDLVKFGLIPEFIGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F+M +V L F + ALR +AKKA+ +NTGARGLR
Sbjct: 312 LEELDEEALMQILTEPKNALTRQYQYLFTMEDVDLVFDESALRAVAKKALERNTGARGLR 371
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEAVGSVDAPGCGAKIL 477
++LEN+L E M+++P T +GT V+VD+ + P A+ L
Sbjct: 372 SILENVLLETMYDLPSRTDVGT-----VIVDEAVINGTAKPTYKAERL 414
>gi|325292626|ref|YP_004278490.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Agrobacterium
sp. H13-3]
gi|418406779|ref|ZP_12980098.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
tumefaciens 5A]
gi|325060479|gb|ADY64170.1| ATP-dependent clp protease ATP-binding subunit ClpX [Agrobacterium
sp. H13-3]
gi|358007272|gb|EHJ99595.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
tumefaciens 5A]
Length = 425
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 201/400 (50%), Positives = 271/400 (67%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ++AKK IL AV+NHYKR+ H+S
Sbjct: 66 VPTPQDIIKILDEYVIGQKQAKK-----IL----------SVAVHNHYKRLAHAS----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G+ VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KNGD--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+A D +L ++ DLV +GLIPEFIGR P+L +
Sbjct: 261 SARGEKTSIGFGATVKAE-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EPKNAL +QY+++F M +V+L F +DALR IA++A+ + TGARGLR
Sbjct: 314 LEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELTFHEDALREIARRAITRKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+++E IL + MFE+P + V V++ + V + P
Sbjct: 374 SIMEKILLDTMFELPTLE----GVREVVISNDVVSGIARP 409
>gi|163793183|ref|ZP_02187159.1| ATP-dependent protease Clp [alpha proteobacterium BAL199]
gi|159181829|gb|EDP66341.1| ATP-dependent protease Clp [alpha proteobacterium BAL199]
Length = 424
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 200/376 (53%), Positives = 261/376 (69%), Gaps = 53/376 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP +IC+ LD++VIGQ +AK+ I + AV+NHYKR+ H
Sbjct: 66 VPTPGDICQVLDDYVIGQLKAKR--ILSV-------------AVHNHYKRLAH------- 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G N ND VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 104 -----------------GQKN--ND--VELAKSNILLIGPTGCGKTLLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGLEKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + SSIGFGA VRA D T +L V+ DL+ +GLIPEF+GR P+L +
Sbjct: 261 SNRSRGSSIGFGADVRA-------PDDRRTGEVLREVEPEDLLKFGLIPEFVGRLPVLAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L ED LV +L +PKNAL +QY+++F M +V+L F DDALR IA+KA+ + TGARGLR
Sbjct: 314 LEDLEEDALVDILTKPKNALVKQYQRLFEMEDVRLEFRDDALRAIARKAIDRKTGARGLR 373
Query: 431 ALLENILTEAMFEIPE 446
+++ENIL + M+++P+
Sbjct: 374 SIMENILLDPMYDLPQ 389
>gi|110680062|ref|YP_683069.1| ATP-dependent protease ATP-binding subunit ClpX [Roseobacter
denitrificans OCh 114]
gi|123361806|sp|Q165G0.1|CLPX_ROSDO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|109456178|gb|ABG32383.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Roseobacter
denitrificans OCh 114]
Length = 421
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 201/414 (48%), Positives = 274/414 (66%), Gaps = 61/414 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPK+IC LD++VIGQ AK+ AV+NHYKR+ H+
Sbjct: 63 VPTPKDICAVLDDYVIGQAMAKRV---------------LSVAVHNHYKRLNHAQ----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G+ +EL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ---------------KGGD--------IELAKSNILLIGPTGCGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +++++VE AQRGIVYIDEVDKI K+E+ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 200 DVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+ R + S++GFGA VR N G + ++ DL+ +GLIPEF+GR P+L +
Sbjct: 258 AARGKGSAMGFGADVRGNDDRG-------VGEIFTDLEPEDLLKFGLIPEFVGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED LV +L +PKNAL +QY+++F + + +L FTDDAL IAK+A+ + TGARGLR
Sbjct: 311 LEDLDEDALVTILTQPKNALVKQYQRLFELEDTELTFTDDALSAIAKRAIERKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELE 484
++LE+IL + MF++P G SV V+V++EAV S AP ++H D E
Sbjct: 371 SILEDILLDTMFDLP----GLESVTEVVVNEEAVNSDAAP----LMIHADASKE 416
>gi|405379886|ref|ZP_11033731.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. CF142]
gi|397323501|gb|EJJ27894.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. CF142]
Length = 425
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 198/375 (52%), Positives = 261/375 (69%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ +AKK IL AV+NHYKR+ H+S
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKK-----IL----------SVAVHNHYKRLAHAS----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G+ VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KNGD--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+A D +L ++ DLV +GLIPEFIGR P+L +
Sbjct: 261 SARGEKTSIGFGATVKAQ-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EPKNAL +QY+++F M +V+L F +DALR IA+KA+ + TGARGLR
Sbjct: 314 LEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELSFHEDALREIARKAIIRKTGARGLR 373
Query: 431 ALLENILTEAMFEIP 445
+++E IL + MFE+P
Sbjct: 374 SIMEKILLDTMFELP 388
>gi|163851840|ref|YP_001639883.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
extorquens PA1]
gi|218530632|ref|YP_002421448.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
extorquens CM4]
gi|240139004|ref|YP_002963479.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Methylobacterium extorquens AM1]
gi|254561599|ref|YP_003068694.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Methylobacterium extorquens DM4]
gi|418060065|ref|ZP_12697993.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Methylobacterium extorquens DSM 13060]
gi|238687353|sp|A9W5F6.1|CLPX_METEP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763853|sp|B7KNT1.1|CLPX_METC4 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|163663445|gb|ABY30812.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacterium extorquens PA1]
gi|218522935|gb|ACK83520.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacterium extorquens CM4]
gi|240008976|gb|ACS40202.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Methylobacterium extorquens AM1]
gi|254268877|emb|CAX24838.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Methylobacterium extorquens DM4]
gi|373566383|gb|EHP92384.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Methylobacterium extorquens DSM 13060]
Length = 423
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 202/410 (49%), Positives = 273/410 (66%), Gaps = 61/410 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEI + LD++VIGQ+ AKK AV+NHYKR+ H++
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKV---------------LSVAVHNHYKRLAHATKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN++L+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNIMLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLE+ I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S+R + +SIGFGA V+A D T + SV+ DL+ +GLIPEF+GR P+L +
Sbjct: 258 SQRGKGTSIGFGASVQA-------PDDRRTGEVFRSVEPEDLLKFGLIPEFVGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L ++L EPKNAL +QY+++F M NV+L F D+AL L+A+KA+ + TGARGLR
Sbjct: 311 LEDLDEEALKKILQEPKNALVKQYQRLFEMENVELTFQDEALSLVARKAIERKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGD 480
++LE IL + M+++P G SV V++ E V P +HGD
Sbjct: 371 SILETILLDTMYDLP----GLESVEQVVIGPEVVEGKSRP----LFIHGD 412
>gi|254463915|ref|ZP_05077326.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodobacterales bacterium Y4I]
gi|206684823|gb|EDZ45305.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodobacterales bacterium Y4I]
Length = 422
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 200/414 (48%), Positives = 277/414 (66%), Gaps = 60/414 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPK+IC+ LD++VIGQ AK+ AV+NHYKR+ H+
Sbjct: 63 VPTPKDICQVLDDYVIGQATAKRV---------------LSVAVHNHYKRLNHAQ----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G+ +EL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ---------------KAGS-------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +++++VE AQRGIVYIDEVDKI K+E+ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + S++GFGA VR N G + + ++ DL+ +GLIPEF+GR P+L +
Sbjct: 259 SARGKGSAMGFGADVRDNDERG-------VGEVFKDLEPEDLLKFGLIPEFVGRLPVLAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ LV +L EPKNAL +QY+++F + + +L FTD+AL+ IA+KA+ + TGARGLR
Sbjct: 312 LEDLDEEALVTILTEPKNALVKQYQRLFELEDTELDFTDEALKAIARKAIQRKTGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELE 484
+++E+IL MF++P G SV V+V++EAV S P ++H D E E
Sbjct: 372 SIMEDILLNTMFDLP----GMDSVTKVVVNEEAVTSDAQP----LMIHADAEKE 417
>gi|365879288|ref|ZP_09418720.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. ORS 375]
gi|365292813|emb|CCD91251.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. ORS 375]
Length = 424
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 199/402 (49%), Positives = 265/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ H + +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKV---------------LSVAVHNHYKRLNHQTKHSD- 106
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 107 ---------------------------VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGLEKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 258 SARGRSTSIGFAAQVLAPEDRRTG---------EIFRHVEPEDLLKYGLIPEFVGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E+ L ++L EPKNAL +QY+++F M N++L F D+AL +++KA+ + TGARG
Sbjct: 309 ATLEDLDENSLKKILTEPKNALVKQYQRLFEMENIELTFADEALGAVSRKAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE+IL E MF++P G V V++ +E V P
Sbjct: 369 LRSILESILLETMFDLP----GLEGVEEVVISREVVEGTARP 406
>gi|99081367|ref|YP_613521.1| ATP-dependent protease ATP-binding subunit ClpX [Ruegeria sp.
TM1040]
gi|123077615|sp|Q1GGF7.1|CLPX_SILST RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|99037647|gb|ABF64259.1| ATP-dependent Clp protease; ATP-binding subunit ClpX [Ruegeria sp.
TM1040]
Length = 421
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 200/410 (48%), Positives = 272/410 (66%), Gaps = 60/410 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPK+IC+ LD++VIGQ AK+ AV+NHYKR+ H+
Sbjct: 63 VPTPKDICEVLDDYVIGQATAKRV---------------LSVAVHNHYKRLNHAQ----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+GN +EL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ---------------KAGN-------DIELSKSNILLIGPTGCGKTLLAQTLARILDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K+E+ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + S++GFGA VR G ++ DL+ +GLIPEF+GR P+L +
Sbjct: 259 KQRGKGSAMGFGADVREESDAG-------VGETFRDLEPEDLLKFGLIPEFVGRLPVLAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+ +L +PKNAL +QY+++F + + +L FTD+AL IAKKA+ + TGARGLR
Sbjct: 312 LEDLDEDALITILTKPKNALVKQYQRLFELEDTELDFTDEALSAIAKKAIERKTGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGD 480
++LE+IL + MFE+P G SV V+V++EAV S P ++H D
Sbjct: 372 SILEDILLDTMFELP----GMESVTKVVVNEEAVCSEAQP----LMIHAD 413
>gi|389806652|ref|ZP_10203699.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter
thiooxydans LCS2]
gi|388445304|gb|EIM01384.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter
thiooxydans LCS2]
Length = 430
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 200/398 (50%), Positives = 265/398 (66%), Gaps = 56/398 (14%)
Query: 64 RNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIY 123
+ + G LP PKEI + LD++V+GQ RAKK+ AVYNHYKRI
Sbjct: 58 KAASGRTQLPKPKEIRESLDQYVVGQTRAKKA---------------LAVAVYNHYKRI- 101
Query: 124 HSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTL 183
S QK +D+I EL KSN+LL+GPTGSGKTLLA+TL
Sbjct: 102 -ESRQK-------------------------SDDI-ELGKSNILLIGPTGSGKTLLAETL 134
Query: 184 ARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-K 242
AR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K
Sbjct: 135 ARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQSGIVYIDEIDKISRK 194
Query: 243 AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGA 302
+E+ + RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DTK+ILFICGGA
Sbjct: 195 SENPSITRDVSGEGVQQALLKLIEGTLASVP-PQGG-RKHPQQEFLQVDTKNILFICGGA 252
Query: 303 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFI 362
F GLEK I +R +++SIGF A VR+ RT L +L V+ DLV +GLIPEF+
Sbjct: 253 FAGLEKVIQQRSENTSIGFSAEVRSKERTENL------GKVLADVEPADLVRFGLIPEFV 306
Query: 363 GRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAK 422
GR P++ +L L+E LV++L EPKNA+ +Q+K++F M V+L F +AL+ IA+KA+ +
Sbjct: 307 GRLPVVATLDELDEAALVKILTEPKNAVTKQFKRLFEMEEVELEFRPEALQAIARKALKR 366
Query: 423 NTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVD 460
TGARGLR +LE +L + M+E+P V+ V+VD
Sbjct: 367 KTGARGLRTILEQVLLDTMYELP----SLEHVSKVVVD 400
>gi|384218432|ref|YP_005609598.1| ATP-dependent Clp protease, ATP-binding subunit [Bradyrhizobium
japonicum USDA 6]
gi|354957331|dbj|BAL10010.1| ATP-dependent Clp protease, ATP-binding subunit [Bradyrhizobium
japonicum USDA 6]
Length = 423
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 202/402 (50%), Positives = 264/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKV---------------LSVAVHNHYKRLNHQTKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 258 SARGRSTSIGFAAQVLAPEDRRTG---------EIFRHVEPEDLLKYGLIPEFVGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E L ++L EPKNAL +QY+++F M N++L F D+AL +A+KA+ + TGARG
Sbjct: 309 ATLEDLDETSLKKILTEPKNALVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE IL E MF++P G V V++ +E V P
Sbjct: 369 LRSILEAILLETMFDLP----GLEGVEEVVISREVVEGTARP 406
>gi|392382085|ref|YP_005031282.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum
brasilense Sp245]
gi|356877050|emb|CCC97851.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum
brasilense Sp245]
Length = 422
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 200/394 (50%), Positives = 269/394 (68%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I LD++VIGQ AK+ AV+NHYKR+ H
Sbjct: 63 VPTPRDIHAVLDDYVIGQHHAKRV---------------LSVAVHNHYKRLAH------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G K ND VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 101 -------------GTK------HND--VELAKSNILLVGPTGCGKTLLAQTLARIIDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTSNILFICGGAFAGLDKII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
++R + +SIGFGA VR D T +L V+ DL+ +GLIPEFIGR P++ +
Sbjct: 258 AQRGKGTSIGFGADVRG-------PDERSTGDILREVEPEDLLKFGLIPEFIGRLPVVAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L+E LV++L +PKNAL +QY+++F M +V+L F+DDALR I+ KA+ + TGARGLR
Sbjct: 311 LADLDESALVEILTKPKNALVKQYQRLFEMEDVRLEFSDDALRTISHKAIQRKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E+IL + MF++P G S V ++LV+KE V
Sbjct: 371 SIMESILLDPMFDLP----GLSGVESILVNKEVV 400
>gi|393769362|ref|ZP_10357886.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
sp. GXF4]
gi|392725261|gb|EIZ82602.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
sp. GXF4]
Length = 423
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 203/410 (49%), Positives = 271/410 (66%), Gaps = 61/410 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEI + LD++VIGQ+ AKK AV+NHYKR+ H++
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKV---------------LSVAVHNHYKRLAHATKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN++L+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNIMLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLE+ I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S+R + +SIGFGA V+A D T + SV+ DL+ +GLIPEF+GR P+L +
Sbjct: 258 SQRGKGTSIGFGASVQA-------PDDRRTGEIFRSVEPEDLLKFGLIPEFVGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L ++L EPKNAL +QY+++F M NV L F DDAL L+A+KA+ + TGARGLR
Sbjct: 311 LEDLDEAALKKILQEPKNALVKQYQRLFEMENVDLTFQDDALSLVARKAIERKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGD 480
++LE IL + M+++P G SV V++ E V P +HGD
Sbjct: 371 SILETILLDTMYDLP----GLESVEQVVIGPEVVEGKSRP----LYIHGD 412
>gi|425744506|ref|ZP_18862562.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-323]
gi|425490661|gb|EKU56957.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-323]
Length = 436
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 197/394 (50%), Positives = 263/394 (66%), Gaps = 50/394 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+
Sbjct: 60 LPKPHEIRAALDQYVIGQDVAKKT---------------LSVAVYNHYKRL--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G N + +I E+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 96 ---------------KVGQSNHGHQDI-EIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 140 AMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK +
Sbjct: 200 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTANILFICGGAFSGLEKIV 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ D+ S L V++ DLV +GLIPEFIGR P++ +
Sbjct: 258 QQRQEKGGIGFTADVKNK------DDSKKVSELFRQVEATDLVKFGLIPEFIGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F+M +V L F + ALR +AKKA+ +NTGARGLR
Sbjct: 312 LEELDEEALMQILTEPKNALTRQYQYLFTMEDVDLVFDESALRAVAKKALDRNTGARGLR 371
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
++LEN+L E M+++P T +GT V+ +++ A
Sbjct: 372 SILENVLLETMYDLPSRTDVGTVIVDEAVINGTA 405
>gi|367473665|ref|ZP_09473213.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. ORS 285]
gi|365274061|emb|CCD85681.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. ORS 285]
Length = 424
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 199/402 (49%), Positives = 265/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ H + +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKV---------------LSVAVHNHYKRLNHQTKHSD- 106
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 107 ---------------------------VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGLEKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 258 SSRGRSTSIGFAAQVLAPEDRRTG---------EIFRHVEPEDLLKYGLIPEFVGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E+ L ++L EPKNAL +QY+++F M N++L F D+AL +++KA+ + TGARG
Sbjct: 309 ATLEDLDENSLKKILTEPKNALVKQYQRLFEMENIELTFADEALGAVSRKAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE+IL E MF++P G V V++ +E V P
Sbjct: 369 LRSILESILLETMFDLP----GLEGVEEVVISREVVEGTARP 406
>gi|227821607|ref|YP_002825577.1| ATP-dependent protease ATP-binding subunit ClpX [Sinorhizobium
fredii NGR234]
gi|254763858|sp|C3MA45.1|CLPX_RHISN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|227340606|gb|ACP24824.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sinorhizobium
fredii NGR234]
Length = 425
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 203/402 (50%), Positives = 271/402 (67%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI K LDE+VIGQ++AK+ IL AV+NHYKR+ H++
Sbjct: 66 VPTPQEIIKVLDEYVIGQQQAKR-----IL----------SVAVHNHYKRLAHAA----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KS + VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KSSD--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGFGA VR+ + R G +L ++ DLV +GLIPEFIGR P+L
Sbjct: 261 SARGEKTSIGFGATVRSPEDRRVG---------EVLRELEPEDLVKFGLIPEFIGRLPVL 311
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+ED L+Q+L EPKNAL +QY+++F M +V+L F +DALR IAK+A+ + TGARG
Sbjct: 312 ATLEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELTFHEDALREIAKRAIIRKTGARG 371
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E IL + MFE+P + V V++ E V P
Sbjct: 372 LRSIMEKILLDTMFELPTLE----GVREVVISDEVVKGTARP 409
>gi|261855008|ref|YP_003262291.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Halothiobacillus neapolitanus c2]
gi|261835477|gb|ACX95244.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Halothiobacillus neapolitanus c2]
Length = 434
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 266/401 (66%), Gaps = 46/401 (11%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTPKE+ + LDE+VIGQ+RAK++ AVYNHYKR+
Sbjct: 61 LPTPKELVEALDEYVIGQQRAKRA---------------LAVAVYNHYKRL--------- 96
Query: 132 VSDHLYVDSILGSGVKSGNCNVEND-EIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
++ GS K + ++D E VEL KSN+LL+GPTGSGKTLLA+TLAR+++VP
Sbjct: 97 --------NLFGSTRKVAEKDKDSDSEPVELSKSNILLIGPTGSGKTLLAQTLARVLDVP 148
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT LT+AGYVGED E++L KLL D+DVE AQ GIVYIDE+DKI K+E+ +
Sbjct: 149 FAIADATTLTEAGYVGEDVENILQKLLQRCDYDVEKAQHGIVYIDEIDKITRKSENPSIT 208
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT +ILFICGGAF GL+
Sbjct: 209 RDVSGEGVQQALLKLIEGTQASVP-PQGG-RKHPQQEFVQLDTTNILFICGGAFSGLDSI 266
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I +R + IGF A V++ D LL ++S DL YGLIPEFIGR P++
Sbjct: 267 IRQRIEKGGIGFSAEVKSK------DDKRAADELLTQIESEDLTRYGLIPEFIGRLPVIA 320
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E LV++L+EPKNAL +QY ++F M V+L +DALR +A++A+ + TGARGL
Sbjct: 321 TLNELDEAALVKILVEPKNALTKQYMRLFEMEGVELDLREDALREVARQAIKRKTGARGL 380
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R ++E++L + MF++P T +V V+VD V +AP
Sbjct: 381 RTIVEHVLLDTMFDVP----STENVQKVVVDASVVRGENAP 417
>gi|149376711|ref|ZP_01894469.1| ATP-dependent protease ATP-binding subunit [Marinobacter algicola
DG893]
gi|149358950|gb|EDM47416.1| ATP-dependent protease ATP-binding subunit [Marinobacter algicola
DG893]
Length = 427
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 199/414 (48%), Positives = 268/414 (64%), Gaps = 56/414 (13%)
Query: 58 ENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYN 117
E N E + LPTP EI L+E+VIGQ+RAK + AVYN
Sbjct: 53 EEIQENAQEEASDRLPTPAEIRDTLNEYVIGQDRAK---------------VVLSVAVYN 97
Query: 118 HYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKT 177
HYKR+ + + E VEL KSN+LL+GPTGSGKT
Sbjct: 98 HYKRLRYGEGKAE----------------------------VELGKSNILLIGPTGSGKT 129
Query: 178 LLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEV 237
LLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+
Sbjct: 130 LLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAQRGIVYIDEI 189
Query: 238 DKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDIL 296
DKI K+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ++L
Sbjct: 190 DKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTGNML 247
Query: 297 FICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYG 356
FICGGAF GL+K I ER + SSIGF A V++ D T +++ V++ DLV YG
Sbjct: 248 FICGGAFAGLDKVIQERSERSSIGFSALVKSP------DDTKNTGDIIKDVETEDLVKYG 301
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
LIPEF+GR P++ +L+ L+E+ LVQ+L EPKNAL +QY+K+F M V+L F +DALR +A
Sbjct: 302 LIPEFVGRLPVVATLTELDEEALVQILTEPKNALTKQYQKLFDMEGVELDFREDALRAVA 361
Query: 417 KKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+KAM + TGARGLR+++E L + M++IP V+ V++D+ + P
Sbjct: 362 RKAMERKTGARGLRSIMEATLLDTMYQIP----SEHDVSKVVIDESVISGQSEP 411
>gi|352085687|ref|ZP_08953278.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodanobacter
sp. 2APBS1]
gi|389798003|ref|ZP_10201031.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter sp.
116-2]
gi|351681628|gb|EHA64752.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodanobacter
sp. 2APBS1]
gi|388445898|gb|EIM01951.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter sp.
116-2]
Length = 430
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 200/398 (50%), Positives = 265/398 (66%), Gaps = 56/398 (14%)
Query: 64 RNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIY 123
+ + G LP PKEI + LD++V+GQ RAKK+ AVYNHYKRI
Sbjct: 58 KAASGRTQLPKPKEIRESLDQYVVGQTRAKKA---------------LAVAVYNHYKRI- 101
Query: 124 HSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTL 183
S QK +D+I EL KSN+LL+GPTGSGKTLLA+TL
Sbjct: 102 -ESRQK-------------------------SDDI-ELGKSNILLIGPTGSGKTLLAETL 134
Query: 184 ARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-K 242
AR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K
Sbjct: 135 ARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQSGIVYIDEIDKISRK 194
Query: 243 AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGA 302
+E+ + RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DTK+ILFICGGA
Sbjct: 195 SENPSITRDVSGEGVQQALLKLIEGTLASVP-PQGG-RKHPQQEFLQVDTKNILFICGGA 252
Query: 303 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFI 362
F GLEK I +R +++SIGF A VR+ RT L +L V+ DLV +GLIPEF+
Sbjct: 253 FAGLEKVIQQRSENTSIGFSAEVRSKERTENL------GKVLADVEPADLVRFGLIPEFV 306
Query: 363 GRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAK 422
GR P++ +L L+E LV++L EPKNA+ +Q+K++F M V+L F +AL+ IA+KA+ +
Sbjct: 307 GRLPVVATLDELDEAALVKILTEPKNAVTKQFKRLFEMEEVELEFRPEALQAIARKALKR 366
Query: 423 NTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVD 460
TGARGLR +LE +L + M+E+P V+ V+VD
Sbjct: 367 KTGARGLRTILEQVLLDTMYELP----SLEHVSKVVVD 400
>gi|400754135|ref|YP_006562503.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Phaeobacter
gallaeciensis 2.10]
gi|398653288|gb|AFO87258.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Phaeobacter
gallaeciensis 2.10]
Length = 422
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 200/414 (48%), Positives = 276/414 (66%), Gaps = 60/414 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPK+IC+ LD++VIGQ AK+ AV+NHYKR+ H+
Sbjct: 63 VPTPKDICEVLDDYVIGQAMAKRV---------------LSVAVHNHYKRLNHAQ----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G+ +EL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ---------------KAGS-------DIELSKSNILLIGPTGCGKTLLAQTLARILDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K+E+ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + S++GFGA VR + G + ++ DL+ +GLIPEF+GR P+L +
Sbjct: 259 KQRGKGSAMGFGADVRDDSDAG-------VGETFKDLEPEDLLKFGLIPEFVGRLPVLAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+ +L +PKNAL +QY+++F + + +L FT++AL IAKKA+ + TGARGLR
Sbjct: 312 LEDLDEDALITILTKPKNALVKQYQRLFELEDTELDFTEEALSSIAKKAIERKTGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELE 484
++LE+IL + MFE+P G SV V+V++EAV S P ++H D E E
Sbjct: 372 SILEDILLDTMFELP----GMDSVEKVVVNEEAVNSDAQP----LMIHADAEKE 417
>gi|288958757|ref|YP_003449098.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum sp.
B510]
gi|288911065|dbj|BAI72554.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum sp.
B510]
Length = 420
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 200/394 (50%), Positives = 269/394 (68%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I LD++VIGQ AK+ AV+NHYKR+ H
Sbjct: 63 VPTPRDIHAVLDDYVIGQSYAKRV---------------LSVAVHNHYKRLAH------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G K ND VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 101 -------------GTK------HND--VELAKSNILLIGPTGCGKTLLAQTLARIIDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTSNILFICGGAFAGLDKII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
++R + +SIGFGA VR+ D T +L V+ DL+ +GLIPEFIGR P+L +
Sbjct: 258 AQRGKGTSIGFGADVRS-------ADERATGEILHEVEPEDLLKFGLIPEFIGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
LS L+E LV++L +PKNAL +QY+++F M +V L F++DA+R IA KA+A+ TGARGLR
Sbjct: 311 LSDLDEAALVEILSKPKNALVKQYQRLFEMEDVHLEFSEDAMRAIAHKAIARKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E IL + MF++P G + + ++LV+KE V
Sbjct: 371 SIMEAILLDPMFDLP----GLTGIESILVNKEVV 400
>gi|414343401|ref|YP_006984922.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconobacter
oxydans H24]
gi|411028736|gb|AFW01991.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconobacter
oxydans H24]
Length = 421
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 269/400 (67%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AK++ AV+NHYKR+ H
Sbjct: 62 VPTPKEICKVLDDYVIGQFEAKRA---------------LSVAVHNHYKRLAH------- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
V+ + +E+ KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 100 ---------------------VQKNSDIEIAKSNILLIGPTGSGKTLLAQTLARILDVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 139 TMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEIDKISRKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ++LFICGGAF GL+K I
Sbjct: 199 DVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNMLFICGGAFAGLDKII 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + S IGFGA VR+ D ++L++V+ DL+ +GLIPEFIGR P++ +
Sbjct: 257 SARGKGSGIGFGADVRSE-------DERRLGAILQTVEPEDLLKFGLIPEFIGRLPVIAA 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L+E L+Q+L +PKNAL +QY ++F M VKL FT+DAL IAK+A+ + TGARGLR
Sbjct: 310 LNDLDESALIQILSKPKNALTKQYGRLFEMEGVKLSFTEDALSGIAKRAIERKTGARGLR 369
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+++ENIL MF++P G V V++++E S P
Sbjct: 370 SIMENILLGTMFDLP----GLEGVEEVVINREVSESKANP 405
>gi|365895291|ref|ZP_09433412.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. STM 3843]
gi|365424010|emb|CCE05954.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. STM 3843]
Length = 424
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 199/402 (49%), Positives = 265/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ H + +
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKV---------------LSVAVHNHYKRLNHQTKHSD- 106
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 107 ---------------------------VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGLEKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 258 SARGRSTSIGFAAQVLAPEDRRTG---------EIFRHVEPEDLLKYGLIPEFVGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E+ L ++L +PKNAL +QY+++F M N++L F D+AL +A+KA+ + TGARG
Sbjct: 309 ATLEDLDENSLKKILTDPKNALVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE+IL E MF++P G V V++ +E V P
Sbjct: 369 LRSILESILLETMFDLP----GLEGVEEVVISREVVEGTARP 406
>gi|430003193|emb|CCF18978.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhizobium sp.]
Length = 425
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 197/375 (52%), Positives = 260/375 (69%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ++AK+ IL AV+NHYKR+ H+S
Sbjct: 66 VPTPQDIIKVLDEYVIGQQQAKR-----IL----------SVAVHNHYKRLAHAS----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KGGE--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+A D +L ++ DLV +GLIPEFIGR P+L +
Sbjct: 261 SARGEKTSIGFGATVKAE-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EPKNAL +QY+++F M +V+L F +DALR IA+KA+ + TGARGLR
Sbjct: 314 LEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELTFHEDALREIARKAITRKTGARGLR 373
Query: 431 ALLENILTEAMFEIP 445
+++E IL + MFE+P
Sbjct: 374 SIMEKILLDTMFELP 388
>gi|146341126|ref|YP_001206174.1| ATP-dependent protease ATP-binding subunit ClpX [Bradyrhizobium sp.
ORS 278]
gi|166214759|sp|A4YVM3.1|CLPX_BRASO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|146193932|emb|CAL77949.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. ORS 278]
Length = 424
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 199/402 (49%), Positives = 265/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ H + +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKV---------------LSVAVHNHYKRLNHQTKHSD- 106
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 107 ---------------------------VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGLEKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 258 SARGRSTSIGFAAQVLAPEDRRTG---------EIFRHVEPEDLLKYGLIPEFVGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E+ L ++L EPKNAL +QY+++F M N++L F D+AL +++KA+ + TGARG
Sbjct: 309 ATLEDLDENSLKKILTEPKNALVKQYQRLFEMENIELTFADEALGAVSRKAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE+IL E MF++P G V V++ +E V P
Sbjct: 369 LRSILESILLETMFDLP----GLEGVEEVVISREVVEGTARP 406
>gi|378825566|ref|YP_005188298.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sinorhizobium
fredii HH103]
gi|365178618|emb|CCE95473.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sinorhizobium
fredii HH103]
Length = 425
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 203/402 (50%), Positives = 271/402 (67%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI K LDE+VIGQ++AK+ IL AV+NHYKR+ H++
Sbjct: 66 VPTPQEIIKVLDEYVIGQQQAKR-----IL----------SVAVHNHYKRLAHAA----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KS + VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KSSD--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGFGA VR+ + R G +L ++ DLV +GLIPEFIGR P+L
Sbjct: 261 SARGEKTSIGFGATVRSPEDRRVG---------EVLRELEPEDLVKFGLIPEFIGRLPVL 311
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+ED L+Q+L EPKNAL +QY+++F M +V+L F +DALR IAK+A+ + TGARG
Sbjct: 312 ATLEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELTFHEDALREIAKRAIIRKTGARG 371
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E IL + MFE+P + V V++ E V P
Sbjct: 372 LRSIMEKILLDTMFELPTLE----GVREVVISDEVVKGTARP 409
>gi|342217840|ref|ZP_08710478.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Megasphaera
sp. UPII 135-E]
gi|341592827|gb|EGS35687.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Megasphaera
sp. UPII 135-E]
Length = 410
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 201/401 (50%), Positives = 261/401 (65%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LP PKEI LDE+VIGQE AKK+ AVYNHYKR+
Sbjct: 58 ELPKPKEIKATLDEYVIGQEAAKKT---------------LSVAVYNHYKRL-------- 94
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N E D+ VEL+KSN++++GPTGSGKTLLA+TLAR+++VP
Sbjct: 95 -------------------RSNTEKDD-VELQKSNIVMLGPTGSGKTLLAQTLARLLDVP 134
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E+ L KL+ AADFD+E AQ GI+YIDE+DKI K+E+ +
Sbjct: 135 FAIADATSLTEAGYVGEDVENCLLKLIQAADFDIEKAQCGIIYIDEIDKISRKSENPSIT 194
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGTV +VP P G RKHP + + IDT +ILFICGGAF G+EKT
Sbjct: 195 RDVSGEGVQQALLKIIEGTVASVP-PQGG-RKHPSQEMLQIDTTNILFICGGAFDGIEKT 252
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I +R D +GFGA + + + L+ V DL +GLIPE +GR P+LV
Sbjct: 253 IQKRTADKKMGFGADIHSKSKKK-------LEETLKEVLPTDLQKFGLIPELVGRLPVLV 305
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ +V +L EPKNAL +QYKKM M+NV+L FT DALR IAK+A+ +NTGARGL
Sbjct: 306 TLNPLDEEAMVHILTEPKNALVKQYKKMLEMDNVELKFTTDALREIAKEALKRNTGARGL 365
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E I+ + MFE+P K V +V+K V P
Sbjct: 366 RSIIERIMLDIMFEVPSRK----DVKKCIVNKSCVTDNQKP 402
>gi|389795693|ref|ZP_10198807.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter
fulvus Jip2]
gi|388430345|gb|EIL87519.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter
fulvus Jip2]
Length = 430
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 202/408 (49%), Positives = 264/408 (64%), Gaps = 56/408 (13%)
Query: 64 RNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIY 123
+ + G LP P+EI + LD++V+GQ RAKK+ AVYNHYKRI
Sbjct: 58 KAASGRTQLPKPREIRESLDQYVVGQSRAKKA---------------LAVAVYNHYKRI- 101
Query: 124 HSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTL 183
S QK SD +EL KSN+LL+GPTGSGKTLLA+TL
Sbjct: 102 -ESRQK---SDD-----------------------IELGKSNILLIGPTGSGKTLLAETL 134
Query: 184 ARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-K 242
AR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K
Sbjct: 135 ARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQSGIVYIDEIDKISRK 194
Query: 243 AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGA 302
+E+ + RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DTK+ILFICGGA
Sbjct: 195 SENPSITRDVSGEGVQQALLKLIEGTLASVP-PQGG-RKHPQQEFLQVDTKNILFICGGA 252
Query: 303 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFI 362
F GLEK I +R + + IGF A VR+ RT L +L V+ DLV +GLIPEF+
Sbjct: 253 FAGLEKVIQQRSETTGIGFSAEVRSKERTENL------GKVLADVEPEDLVRFGLIPEFV 306
Query: 363 GRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAK 422
GR P++ +L L+E LV++L EPKNA+ +Q+KK+F M V+L F +AL+ IAKKA+ +
Sbjct: 307 GRLPVVATLDELDEAALVKILTEPKNAVTKQFKKLFEMEEVELEFRPEALQAIAKKALKR 366
Query: 423 NTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
TGARGLR +LE +L E M+E+P V+ V+VD + P
Sbjct: 367 KTGARGLRTILEQVLLETMYELP----SLEHVSKVVVDDAVINGQAEP 410
>gi|160871875|ref|ZP_02062007.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rickettsiella
grylli]
gi|159120674|gb|EDP46012.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rickettsiella
grylli]
Length = 439
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 201/406 (49%), Positives = 265/406 (65%), Gaps = 48/406 (11%)
Query: 66 SEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHS 125
EG + +P P EI + +EFVIGQE AKK IL A YNHYKR+
Sbjct: 59 QEGGMSIPKPSEIHEVFNEFVIGQEFAKK-----IL----------SVAAYNHYKRL--- 100
Query: 126 SLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLAR 185
EL+ + N ++D EL KSNVLL+GPTGSGKTLLAKTLAR
Sbjct: 101 ----ELIKK-----------ARLHPLNTKDD--TELSKSNVLLIGPTGSGKTLLAKTLAR 143
Query: 186 IVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AE 244
+ N+PF I DAT LT+AGYVG+D E++L KLL AA+ +E AQ GI+YIDE+DKI + AE
Sbjct: 144 VFNLPFAIADATTLTEAGYVGDDVENILQKLLQAANGSIEKAQLGIIYIDEIDKISRRAE 203
Query: 245 SRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFV 304
+ + RDVSGEGVQQ LLK+LEGTV +VP+ G RKHP + + IDT +ILFICGG F
Sbjct: 204 NPSITRDVSGEGVQQGLLKLLEGTVASVPL--QGGRKHPNQETVQIDTTNILFICGGTFS 261
Query: 305 GLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGR 364
GLEK I ER + + IGF A VR+ LT +LL +DS DL+ YG+IPE IGR
Sbjct: 262 GLEKIIRERTEKTGIGFSADVRSKKDKKSLT------TLLSRLDSEDLIKYGIIPELIGR 315
Query: 365 FPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNT 424
P++ +L L+E L+Q+L EPKNAL +QY K+F M+NV L F +DAL+++A+KA+A+ T
Sbjct: 316 LPVIATLEELDESMLIQILKEPKNALIKQYFKLFKMDNVDLEFREDALQMVARKALARKT 375
Query: 425 GARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
GARGLRA+LE++L + M+E+P + +VN ++++ V P
Sbjct: 376 GARGLRAILESVLLDTMYELPSMQ----NVNKIVIEASTVSKGAKP 417
>gi|410943167|ref|ZP_11374908.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconobacter
frateurii NBRC 101659]
Length = 421
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 269/400 (67%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AK++ AV+NHYKR+ H+
Sbjct: 62 VPTPKEICKVLDDYVIGQFEAKRA---------------LSVAVHNHYKRLAHA------ 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ + +E+ KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 101 ----------------------QKNSDIEIAKSNILLIGPTGSGKTLLAQTLARILDVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 139 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ++LFICGGAF GL+K I
Sbjct: 199 DVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNMLFICGGAFAGLDKII 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + S IGFGA VR+ D ++L++V+ DL+ +GLIPEFIGR P++ +
Sbjct: 257 SARGKGSGIGFGADVRSE-------DERRLGAILQTVEPEDLLKFGLIPEFIGRLPVIAA 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L+E L+Q+L +PKNAL +QY ++F M VKL FT+DAL IAK+A+ + TGARGLR
Sbjct: 310 LNDLDEAALIQILSKPKNALTKQYGRLFEMEGVKLSFTEDALSGIAKRAIERKTGARGLR 369
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+++ENIL MF++P G V V++++E S P
Sbjct: 370 SIMENILLGTMFDLP----GLEGVEEVVINREVAESKANP 405
>gi|260426453|ref|ZP_05780432.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Citreicella
sp. SE45]
gi|260420945|gb|EEX14196.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Citreicella
sp. SE45]
Length = 421
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 202/416 (48%), Positives = 275/416 (66%), Gaps = 60/416 (14%)
Query: 56 ETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAV 115
E G ++SEG +P+P+EIC LD++VIGQ AK+ AV
Sbjct: 50 EETKGAGLKSSEG---VPSPREICDVLDDYVIGQMMAKRV---------------LSVAV 91
Query: 116 YNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSG 175
+NHYKR+ HS KS + +EL KSN+LL+GPTG G
Sbjct: 92 HNHYKRLNHSQ--------------------KSSD--------IELAKSNILLIGPTGCG 123
Query: 176 KTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYID 235
KTLLA+TLARI++VPFT+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYID
Sbjct: 124 KTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYID 183
Query: 236 EVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKD 294
EVDKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +
Sbjct: 184 EVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTN 241
Query: 295 ILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVA 354
ILFICGGAF GL++ I++R + S++GFGA VR G T + + ++ DL+
Sbjct: 242 ILFICGGAFAGLDRIIAQRGKGSAMGFGADVREPDERG-------TGEVFKDLEPEDLLK 294
Query: 355 YGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRL 414
+GLIPEF+GR P++ +L L+ED LV +L +PKNAL +QY+++F M + +L FTDDAL
Sbjct: 295 FGLIPEFVGRLPVIATLEDLDEDALVTILTQPKNALVKQYQRLFEMEDTELSFTDDALSA 354
Query: 415 IAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
IAK+A+ + TGARGLR++LE IL + MFE+P G V V+V++EAV S P
Sbjct: 355 IAKRAIERKTGARGLRSILEGILLDTMFELP----GMDDVTEVVVNEEAVTSEAKP 406
>gi|86749682|ref|YP_486178.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodopseudomonas
palustris HaA2]
gi|123292611|sp|Q2IWZ3.1|CLPX_RHOP2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|86572710|gb|ABD07267.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Rhodopseudomonas palustris HaA2]
Length = 424
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 201/402 (50%), Positives = 265/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKV---------------LSVAVHNHYKRLNHQTKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 258 SARGRSTSIGFAAQVLAPEDRRTG---------EIFRHVEPEDLLKYGLIPEFVGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E L ++L +PKNAL +QY+++F M N++L F D+AL +A+KA+ + TGARG
Sbjct: 309 ATLEDLDEASLKKILTDPKNALVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE+IL E MF++P G V V++ +E V P
Sbjct: 369 LRSILESILLETMFDLP----GLEGVEEVVISREVVDGTARP 406
>gi|23014985|ref|ZP_00054777.1| COG1219: ATP-dependent protease Clp, ATPase subunit
[Magnetospirillum magnetotacticum MS-1]
Length = 422
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 196/394 (49%), Positives = 265/394 (67%), Gaps = 56/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPK+IC+ LD++VIGQ AKK AV+NHYKR+ H
Sbjct: 63 VPTPKDICQVLDDYVIGQGHAKKV---------------LSVAVHNHYKRLQHGG----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+N+ VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ----------------------KNNNEVELAKSNILLIGPTGCGKTLLAQTLARILDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AA+++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIILKLLQAAEYNVERAQRGIVYIDEVDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +V P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 201 DVSGEGVQQALLKIMEGTVASV--PPQGGRKHPQQEFLQVDTTNILFICGGAFSGLEKII 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R + +SIGFGA VR D T +L V+ DL+ +GLIPEF+GR P+L +
Sbjct: 259 GSRGRGTSIGFGADVRG-------PDERRTGEILREVEPEDLLKFGLIPEFVGRLPVLAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ D L+ +L +PKNAL +QY+++F M + +L F+DDAL+ IA+KA+A+ TGARGLR
Sbjct: 312 LEDLDVDALIDILSKPKNALVKQYQRLFEMEDTRLSFSDDALKAIAEKAIARKTGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E IL + MF++P G +V+ V+++KE V
Sbjct: 372 SIMETILLDTMFDLP----GLDAVDEVVINKEVV 401
>gi|209548851|ref|YP_002280768.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|424890862|ref|ZP_18314461.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|424894552|ref|ZP_18318126.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM2297]
gi|424914595|ref|ZP_18337959.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|238066658|sp|B5ZY09.1|CLPX_RHILW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|209534607|gb|ACI54542.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|392850771|gb|EJB03292.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|393173080|gb|EJC73125.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|393178779|gb|EJC78818.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM2297]
Length = 425
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 201/394 (51%), Positives = 268/394 (68%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ +AKK IL AV+NHYKR+ H+S
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKK-----IL----------SVAVHNHYKRLAHAS----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KNGE--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+A D +L ++ DLV +GLIPEFIGR P+L +
Sbjct: 261 SARGEKTSIGFGATVKAQ-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EPKNAL +QY+++F M +V+L F +DALR IA+KA+ + TGARGLR
Sbjct: 314 LEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELTFHEDALREIARKAIVRKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E IL + MFE+P + V V++ +E V
Sbjct: 374 SIMEKILLDTMFELPTLE----GVREVVISEEVV 403
>gi|290969193|ref|ZP_06560718.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Megasphaera
genomosp. type_1 str. 28L]
gi|335049524|ref|ZP_08542514.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Megasphaera
sp. UPII 199-6]
gi|290780699|gb|EFD93302.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Megasphaera
genomosp. type_1 str. 28L]
gi|333762784|gb|EGL40269.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Megasphaera
sp. UPII 199-6]
Length = 410
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 201/400 (50%), Positives = 262/400 (65%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LDE+VIGQE AKK+ AVYNHYKR+
Sbjct: 59 LPTPHEIKATLDEYVIGQEAAKKT---------------LAVAVYNHYKRL--------- 94
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + D+ VEL+KSNV+++GPTGSGKTLLA+TLAR++NVPF
Sbjct: 95 ------------------QSNTDADD-VELQKSNVVMVGPTGSGKTLLAQTLARLLNVPF 135
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT+LT+AGYVGED E+ L KL+ AAD+D+E AQRGI+YIDE+DKI K+E+ + R
Sbjct: 136 AIADATSLTEAGYVGEDVENCLLKLIQAADYDIEKAQRGIIYIDEIDKISRKSENPSITR 195
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV VP P G RKHP D + IDT +ILFICGGAF G++KTI
Sbjct: 196 DVSGEGVQQALLKILEGTVAGVP-PQGG-RKHPHQDMLQIDTTNILFICGGAFDGIDKTI 253
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R D +GFGA V++ + +LL+ + DL +GLIPE IGR P+LV+
Sbjct: 254 QKRISDKKMGFGADVQSKSKKA-------LKTLLKDIIPVDLQKFGLIPELIGRLPVLVT 306
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ +V +L EPKNAL +QY+KM M++V+L FT DAL+ IAK+A+ +NTGARGLR
Sbjct: 307 LDPLDEEAMVHILTEPKNALVKQYQKMLKMDDVELKFTSDALQEIAKEALRRNTGARGLR 366
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+++E I+ + MF++P K V +V+K V P
Sbjct: 367 SIIERIMLDVMFDVPSRK----DVEKCIVNKSCVTEGKKP 402
>gi|188581624|ref|YP_001925069.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
populi BJ001]
gi|238692872|sp|B1Z9C8.1|CLPX_METPB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|179345122|gb|ACB80534.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacterium populi BJ001]
Length = 423
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 202/410 (49%), Positives = 273/410 (66%), Gaps = 61/410 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEI + LD++VIGQ+ AKK AV+NHYKR+ H++
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKV---------------LSVAVHNHYKRLAHATKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN++L+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNIMLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLE+ I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S+R + +SIGFGA V+A D T + SV+ DL+ +GLIPEF+GR P+L +
Sbjct: 258 SQRGKGTSIGFGASVQA-------PDDRRTGEVFRSVEPEDLLKFGLIPEFVGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L ++L EPKNAL +QY+++F M NV+L F D+AL L+A+KA+ + TGARGLR
Sbjct: 311 LEDLDEEALKKILQEPKNALVKQYQRLFEMENVELTFQDEALGLVARKAIERKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGD 480
++LE IL + M+++P G SV V++ E V P +HGD
Sbjct: 371 SILETILLDTMYDLP----GLDSVEQVVIGPEVVDGKSKP----LFIHGD 412
>gi|83311890|ref|YP_422154.1| ATP-dependent protease ATP-binding subunit ClpX [Magnetospirillum
magneticum AMB-1]
gi|123541533|sp|Q2W3I0.1|CLPX_MAGSA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|82946731|dbj|BAE51595.1| ATP-dependent protease Clp [Magnetospirillum magneticum AMB-1]
Length = 421
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 198/394 (50%), Positives = 267/394 (67%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPK+IC+ LD++VIGQ AKK AV+NHYKR+ H
Sbjct: 63 VPTPKDICQVLDDYVIGQSHAKKV---------------LSVAVHNHYKRLQHGG----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+N+E VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ----------------------KNNE-VELAKSNILLIGPTGCGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AA+++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAAEYNVERAQRGIVYIDEVDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R + +SIGFGA VR D T +L V+ DL+ +GLIPEF+GR P+L +
Sbjct: 258 GSRGRGTSIGFGADVRG-------PDERRTGEILREVEPEDLLKFGLIPEFVGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ D L+ +L +PKNAL +QY+++F M + +L F+DDAL+ IA+KA+A+ TGARGLR
Sbjct: 311 LEDLDVDALIDILSKPKNALVKQYQRLFEMEDTRLAFSDDALKAIAEKAIARKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E IL + MF++P G +V+ V+++KE V
Sbjct: 371 SIMETILLDTMFDLP----GLDAVDEVVINKEVV 400
>gi|349685704|ref|ZP_08896846.1| Clp protease ATP-binding subunit [Gluconacetobacter oboediens
174Bp2]
Length = 419
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 199/392 (50%), Positives = 269/392 (68%), Gaps = 57/392 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EICK LD++VIGQ AKK AV+NHYKR+ H+ QK
Sbjct: 62 VPTPREICKILDDYVIGQAHAKKV---------------LSVAVHNHYKRLAHA--QKN- 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VE+ KSN++L+GPTGSGKTLLA+TLARI++VPF
Sbjct: 104 -----------------------ND--VEIAKSNIMLIGPTGSGKTLLAQTLARILDVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 139 TMADATTLTEAGYVGEDVENIILKLLQAADYNVEKAQRGIVYIDEIDKISRKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ++LFICGGAF GL+K I
Sbjct: 199 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNMLFICGGAFAGLDKII 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + S IGFGA V++ D ++L V+ DL+ +GLIPEFIGR P++ +
Sbjct: 257 SARGKGSGIGFGADVQS-------PDERRMGAVLRDVEPEDLLKFGLIPEFIGRLPVVAT 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+++L +PKNAL +QY ++F M +V+L FT+DALR +A++A+A+ TGARGLR
Sbjct: 310 LEDLDEAALIEILTKPKNALVKQYARLFQMEDVQLTFTEDALRQVAQRAIARRTGARGLR 369
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKE 462
A+LE+IL MFE+P G +V ++V+KE
Sbjct: 370 AILESILLSTMFELP----GLKNVEEIVVNKE 397
>gi|218440072|ref|YP_002378401.1| ATP-dependent protease ATP-binding subunit ClpX [Cyanothece sp. PCC
7424]
gi|226706581|sp|B7KBH7.1|CLPX_CYAP7 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|218172800|gb|ACK71533.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cyanothece
sp. PCC 7424]
Length = 447
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 205/431 (47%), Positives = 271/431 (62%), Gaps = 50/431 (11%)
Query: 35 EEIMGGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKK 94
EE+M S + +R+R S G I P P+EI K LDE+VIGQ AKK
Sbjct: 45 EELMEAPTSPVASSVSSREDRPKRRSSRDRLSLGQI--PKPREIKKYLDEYVIGQNEAKK 102
Query: 95 SHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVE 154
AVYNHYKR+ S +Q + G+G
Sbjct: 103 V---------------LSVAVYNHYKRL--SDIQAKRT----------GTGA-------- 127
Query: 155 NDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLY 214
D+ VEL+KSN+LLMGPTGSGKTLLA+TLA+I++VPF + DAT LT+AGYVGED E++L
Sbjct: 128 TDDPVELQKSNILLMGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILL 187
Query: 215 KLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVP 273
+LL AD DVE AQRGI+YIDE+DKI K+E+ + RDVSGEGVQQALLKMLEGTV NVP
Sbjct: 188 RLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVP 247
Query: 274 IPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGG 333
P G RKHP D I IDT +ILFICGGAFVGL+K + +R S+GF P G
Sbjct: 248 -PQGG-RKHPYQDCIQIDTSNILFICGGAFVGLDKIVEQRLGKKSMGFIRPAE------G 299
Query: 334 LTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQ 393
+ ++ LL+ ++ DLV +G+IPEF+GR P++ SL L+ED L+ +L +P+NAL +Q
Sbjct: 300 TSKEKWSADLLKQLEPDDLVKFGMIPEFVGRIPVMASLDPLDEDALIAILTQPRNALVKQ 359
Query: 394 YKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSS 453
Y+K+ M+NV+L F +A+R IA++A + TGAR LR ++E ++ E M+E+P K
Sbjct: 360 YQKLLKMDNVQLEFKSEAVRAIAQEAYRRKTGARALRGIVEELMLEVMYELPSRK----D 415
Query: 454 VNAVLVDKEAV 464
V L+ +E V
Sbjct: 416 VKRCLITREMV 426
>gi|399038247|ref|ZP_10734548.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. CF122]
gi|398063910|gb|EJL55617.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. CF122]
Length = 425
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 196/375 (52%), Positives = 258/375 (68%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ +AKK IL AV+NHYKR+ H++ E
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKK-----IL----------SVAVHNHYKRLAHATKNSE- 109
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 110 ---------------------------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+A D +L ++ DLV +GLIPEFIGR P+L +
Sbjct: 261 SARGEKTSIGFGATVKA-------PDDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EPKNAL +QY+++F M +V+L F +DALR IA+KA+ + TGARGLR
Sbjct: 314 LEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELTFHEDALREIARKAIVRKTGARGLR 373
Query: 431 ALLENILTEAMFEIP 445
+++E IL + MFE+P
Sbjct: 374 SIMEKILLDTMFELP 388
>gi|332186790|ref|ZP_08388532.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sphingomonas
sp. S17]
gi|332013123|gb|EGI55186.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sphingomonas
sp. S17]
Length = 420
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 204/402 (50%), Positives = 264/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EIC LD++VIGQ++AK+ AV+NHYKR+ H
Sbjct: 61 VPTPQEICNVLDDYVIGQKQAKRV---------------LSVAVHNHYKRLNH------- 98
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G K + VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 99 -------------GAKGAD--------VELAKSNILLVGPTGCGKTLLAQTLARILDVPF 137
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI KAE+ + R
Sbjct: 138 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKAENPSITR 197
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 198 DVSGEGVQQALLKLMEGTTASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 255
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
+R Q SIGFGA V A RTG L + DL+ +GLIPEF+GR P++
Sbjct: 256 GDRLQGKSIGFGAYVAAPEEKRTG---------EYLRQTEPEDLLKFGLIPEFVGRLPVI 306
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+ LV++L EPKNAL +QY+K+F M NV+L FTDDAL +AKKA+ + TGARG
Sbjct: 307 ATLEDLDIAALVKILSEPKNALVKQYQKLFEMENVELDFTDDALTTVAKKAIERKTGARG 366
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE IL + MF++P G V+ V+VDK+ V P
Sbjct: 367 LRSILEGILLDTMFDLP----GMDGVDEVMVDKDVVEGRKEP 404
>gi|317123028|ref|YP_004103031.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermaerobacter marianensis DSM 12885]
gi|315593008|gb|ADU52304.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermaerobacter marianensis DSM 12885]
Length = 419
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 204/401 (50%), Positives = 265/401 (66%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLP P EI LD++VIGQERAKK IL AVYNHYKRI+
Sbjct: 60 DLPKPAEIKAFLDQYVIGQERAKK-----IL----------AVAVYNHYKRIH------- 97
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
LG + VEL+KSN+L++GPTGSGKTLLA+TLA+++NVP
Sbjct: 98 -----------LGGRIDD----------VELQKSNILMIGPTGSGKTLLAQTLAKLLNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E A+RGIVYIDE+DKI KAE+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIERAERGIVYIDEIDKIARKAENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFICGGAF GL+K
Sbjct: 197 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFEGLDKI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
IS R +GFGA VR+ T +L + DL+ +GLIPEF+GR P++
Sbjct: 255 ISSRIGRRVLGFGAEVRSKQETN-------VGEILRHIMPEDLLKFGLIPEFVGRLPVIA 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+ED LV++L EPKNAL +QY K+ +++NV+L F +ALR IA++A+ +NTGARGL
Sbjct: 308 TLDALDEDALVRILTEPKNALVKQYHKLLALDNVELEFEPEALRAIAQEALKRNTGARGL 367
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA++E ++ + M+E+P G V V+V +E V P
Sbjct: 368 RAIVEELMLDLMYELP----GRDDVARVVVTEETVRQRREP 404
>gi|116251455|ref|YP_767293.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium
leguminosarum bv. viciae 3841]
gi|241204074|ref|YP_002975170.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|424874765|ref|ZP_18298427.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|424881044|ref|ZP_18304676.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WU95]
gi|166214809|sp|Q1MIM6.1|CLPX_RHIL3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|115256103|emb|CAK07184.1| putative ATP-dependent Clp protease ATP-binding subunit ClpX
[Rhizobium leguminosarum bv. viciae 3841]
gi|240857964|gb|ACS55631.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|392517407|gb|EIW42139.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WU95]
gi|393170466|gb|EJC70513.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 425
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 200/394 (50%), Positives = 269/394 (68%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ +AKK IL AV+NHYKR+ H+S
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKK-----IL----------SVAVHNHYKRLAHAS----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KNGE--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V++ D +L ++ DLV +GLIPEFIGR P+L +
Sbjct: 261 SARGEKTSIGFGASVKSQ-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EPKNAL +QY+++F M +V+L+F +DALR IA+KA+ + TGARGLR
Sbjct: 314 LEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELNFHEDALREIARKAIVRKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E IL + MFE+P + V V++ +E V
Sbjct: 374 SIMEKILLDTMFELPTLE----GVREVVISEEVV 403
>gi|399992449|ref|YP_006572689.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|398657004|gb|AFO90970.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 422
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 200/414 (48%), Positives = 275/414 (66%), Gaps = 60/414 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPK+IC+ LD++VIGQ AK+ AV+NHYKR+ H+
Sbjct: 63 VPTPKDICEVLDDYVIGQAMAKRV---------------LSVAVHNHYKRLNHAQ----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G+ +EL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ---------------KAGS-------DIELSKSNILLIGPTGCGKTLLAQTLARILDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K+E+ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + S++GFGA VR + G + ++ DL+ +GLIPEF+GR P+L +
Sbjct: 259 KQRGKGSAMGFGADVRDDSDAG-------VGETFKDLEPEDLLKFGLIPEFVGRLPVLAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+ +L +PKNAL +QY+++F + + +L FT++AL IAKKA+ + TGARGLR
Sbjct: 312 LEDLDEDALITILTKPKNALVKQYQRLFELEDTELDFTEEALSSIAKKAIERKTGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELE 484
++LE+IL MFE+P G SV V+V++EAV S P ++H D E E
Sbjct: 372 SILEDILLNTMFELP----GMDSVEKVVVNEEAVNSDAQP----LMIHADAEKE 417
>gi|89070384|ref|ZP_01157691.1| ATP-dependent protease ATP-binding subunit [Oceanicola granulosus
HTCC2516]
gi|89044031|gb|EAR50206.1| ATP-dependent protease ATP-binding subunit [Oceanicola granulosus
HTCC2516]
Length = 422
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 200/436 (45%), Positives = 287/436 (65%), Gaps = 73/436 (16%)
Query: 36 EIMGGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKS 95
E+ IR++ +++G++S S+G +PTP+EIC+ LD++VIGQ AK+
Sbjct: 42 ELCMDIIREETKTSGLKS------------SDG---VPTPREICEVLDDYVIGQMHAKRV 86
Query: 96 HIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEN 155
AV+NHYKR+ H+ +
Sbjct: 87 ---------------LSVAVHNHYKRLNHA-----------------------------D 102
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
+EL KSN+LL+GPTG GKTLLA+TLARI++VPFT+ DAT LT+AGYVGED E+++ K
Sbjct: 103 KSDIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILK 162
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
LL A++++VE AQRGIVYIDEVDKI K+++ + RDVSGEGVQQALLK++EGTV +VP
Sbjct: 163 LLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP- 221
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
P G RKHP+ + + +DT +ILFICGGAF GL+K I++R + S++GFGA VR G
Sbjct: 222 PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRDVEERG-- 278
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
+ +S++ DL+ +GLIPEF+GR P++ +L L+E+ LV +L +PKNAL +QY
Sbjct: 279 -----VGEVFKSLEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALVTILTQPKNALVKQY 333
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSV 454
+++F + + KL FTDDA++ IAK+A+ + TGARGLR+++E+IL + MF++P G SV
Sbjct: 334 QRLFDLEDTKLTFTDDAMKAIAKRAIERKTGARGLRSIMEDILLDTMFDLP----GMDSV 389
Query: 455 NAVLVDKEAVGSVDAP 470
N V+V++EAVG P
Sbjct: 390 NEVVVNEEAVGPDATP 405
>gi|383771491|ref|YP_005450556.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bradyrhizobium
sp. S23321]
gi|381359614|dbj|BAL76444.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bradyrhizobium
sp. S23321]
Length = 423
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 201/402 (50%), Positives = 264/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKV---------------LSVAVHNHYKRLNHQTKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 258 SARGRSTSIGFAAQVLAPEDRRTG---------EIFRHVEPEDLLKYGLIPEFVGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E L ++L EPKNAL +QY+++F M N++L F D+AL +A++A+ + TGARG
Sbjct: 309 ATLEDLDEASLKKILTEPKNALVKQYQRLFEMENIELTFADEALGAVARRAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE IL E MF++P G V V++ +E V P
Sbjct: 369 LRSILEAILLETMFDLP----GLEGVEEVVISREVVEGTARP 406
>gi|379012039|ref|YP_005269851.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acetobacterium
woodii DSM 1030]
gi|375302828|gb|AFA48962.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acetobacterium
woodii DSM 1030]
Length = 423
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 201/395 (50%), Positives = 254/395 (64%), Gaps = 56/395 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI K L E+VI Q AK++ AVYNHYKRI
Sbjct: 59 DVPKPKEIKKKLSEYVIAQNHAKRA---------------LSVAVYNHYKRITSMD---- 99
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
END VEL+KSN+LL+GPTGSGKTLLA+TLAR++NVP
Sbjct: 100 -----------------------ENDPEVELQKSNILLIGPTGSGKTLLAQTLARVLNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KLL AA+FDV A++GI+YIDE+DKI K ++ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLLQAANFDVAKAEKGIIYIDEIDKIARKGDNPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV NVP P G RKHP D I I+T ++LFICGGAF G++K
Sbjct: 197 RDVSGEGVQQALLKILEGTVANVP-PQGG-RKHPHQDFIQINTNNVLFICGGAFDGMDKL 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I +R SS+GFGA VR N + + L SV DL+ YGLIPEFIGR P++
Sbjct: 255 IEQRTDKSSMGFGAEVRNNKKE-------TEDNTLNSVQPQDLLKYGLIPEFIGRIPVIA 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SL L+E+ L+Q+L EP+NAL +QY KMF + V+L F DAL IAKKA+ TGARGL
Sbjct: 308 SLEHLDEEALIQILTEPRNALVKQYIKMFKIEGVELEFHQDALVAIAKKALDTKTGARGL 367
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
R ++ENI+ + MFE+P ++ V++ E V
Sbjct: 368 RGIIENIMLDIMFEVP----SNENIEKVIITNEVV 398
>gi|91977363|ref|YP_570022.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodopseudomonas
palustris BisB5]
gi|123762673|sp|Q135W8.1|CLPX_RHOPS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91683819|gb|ABE40121.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Rhodopseudomonas palustris BisB5]
Length = 424
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 201/402 (50%), Positives = 265/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQGHAKKV---------------LSVAVHNHYKRLNHQTKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 258 SARGRSTSIGFAAQVLAPEDRRTG---------EIFRHVEPEDLLKYGLIPEFVGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E L ++L +PKNAL +QY+++F M N++L F D+AL +A+KA+ + TGARG
Sbjct: 309 ATLEDLDEASLKKILTDPKNALVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE+IL E MF++P G V V++ +E V P
Sbjct: 369 LRSILESILLETMFDLP----GLEGVEEVVISREVVDGTARP 406
>gi|119774362|ref|YP_927102.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella
amazonensis SB2B]
gi|166215200|sp|A1S4X6.1|CLPX_SHEAM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|119766862|gb|ABL99432.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
amazonensis SB2B]
Length = 425
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 262/401 (65%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP E+ LD++VIGQE+AKK AVYNHYKR+ ++
Sbjct: 64 LPTPHELRAHLDDYVIGQEKAKKV---------------LSVAVYNHYKRLRNA------ 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G K G VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF
Sbjct: 103 -------------GPKDG---------VELGKSNILLIGPTGSGKTLLAETLARFLNVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GLEK I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLEKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R S IGFGA V+ ++D +L V+ DLV YGLIPEFIGR P++
Sbjct: 259 EQRTHTGSGIGFGAQVKGKEEKESMSD------ILSQVEPEDLVKYGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+ED L+Q+L EPKNAL +QY +F M NV+L F +DAL+ IA+KAM++ TGARGL
Sbjct: 313 TLAELDEDALIQILSEPKNALTKQYAALFEMENVELEFREDALKAIAQKAMSRKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E IL + M+++P + V+ +VD+ V AP
Sbjct: 373 RSIVEGILLDTMYDLPSQQ----GVSKAVVDESVVKGESAP 409
>gi|329114675|ref|ZP_08243434.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acetobacter
pomorum DM001]
gi|326696155|gb|EGE47837.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acetobacter
pomorum DM001]
Length = 421
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 271/400 (67%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EICK LD++VIGQ +AKK AV+NHYKR+ +
Sbjct: 62 VPTPREICKVLDDYVIGQAQAKKV---------------LSVAVHNHYKRLTQVA----- 101
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G+ VE+ KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 102 ---------------KAGD--------VEIAKSNILLIGPTGSGKTLLAQTLARILDVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 139 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISKKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ++LFICGGAF GL+K I
Sbjct: 199 DVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNMLFICGGAFAGLDKII 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + ++IGFGA VRA D T +L V+ DL+ +GLIPEFIGR P++ +
Sbjct: 257 SARGKGTNIGFGADVRA-------PDERKTGEILHDVEPEDLMKFGLIPEFIGRLPVIAT 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+++L EPKNAL +QY+++F M +V+L FTDDAL+ IA +A+ + TGARGLR
Sbjct: 310 LGDLDEAALIKILTEPKNALVKQYQRLFQMEDVQLDFTDDALKAIADRAIVRKTGARGLR 369
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE+IL MF++P G +V V+V+++ +P
Sbjct: 370 SILESILMSTMFDLP----GLENVEEVVVNRDVAEGKASP 405
>gi|222148265|ref|YP_002549222.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
vitis S4]
gi|254763828|sp|B9JVD6.1|CLPX_AGRVS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|221735253|gb|ACM36216.1| ATP-dependent Clp protease ATP-binding subunit [Agrobacterium vitis
S4]
Length = 425
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 204/402 (50%), Positives = 270/402 (67%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ +AKK IL AV+NHYKR+ H+S
Sbjct: 66 VPTPQDIIKILDEYVIGQRQAKK-----IL----------SVAVHNHYKRLSHAS----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G+ VEL KSN+LL+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KGGD--------VELAKSNILLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGFGA V + + R G +L ++ DLV +GLIPEFIGR P+L
Sbjct: 261 SARGEKTSIGFGATVVSPEDRRVG---------EVLRELEPEDLVKFGLIPEFIGRLPVL 311
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+ED L+Q+L EPKNAL +QY+++F M +V+L F +DALR IA+KA+ + TGARG
Sbjct: 312 ATLEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELSFHEDALREIARKAITRKTGARG 371
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E IL + MFE+PE + V V++ E V P
Sbjct: 372 LRSIMEKILLDTMFELPELE----GVREVVISDEVVRGAARP 409
>gi|84387736|ref|ZP_00990752.1| ATP-dependent protease ATP-binding subunit [Vibrio splendidus
12B01]
gi|84377419|gb|EAP94286.1| ATP-dependent protease ATP-binding subunit [Vibrio splendidus
12B01]
Length = 426
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 261/401 (65%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP+EI + LD++VIGQE AKK AVYNHYKR+
Sbjct: 65 LPTPREIREHLDDYVIGQEYAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 ---------------RNGDTTAEG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLVEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFSGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + SSIGFGA VR+ +A L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVEKGSSIGFGAEVRSK------DEAKTVGELFTQVEPEDLVKYGLIPEFIGRLPVTT 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ LVQ+L EPKNAL +QY +F + +L F DDALR IAKKAM + TGARGL
Sbjct: 315 TLTELDEEALVQILCEPKNALTKQYAALFEIEETELEFRDDALRAIAKKAMERKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P ++ V+ V++D+ + P
Sbjct: 375 RSILEGVLLETMYELP----SSTDVSKVVIDESVINGESEP 411
>gi|408373742|ref|ZP_11171436.1| ATP-dependent protease ATP-binding subunit ClpX [Alcanivorax
hongdengensis A-11-3]
gi|407766446|gb|EKF74889.1| ATP-dependent protease ATP-binding subunit ClpX [Alcanivorax
hongdengensis A-11-3]
Length = 427
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 200/400 (50%), Positives = 259/400 (64%), Gaps = 54/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LDE+VIGQERAKK AVYNHYKR+ S+ +K
Sbjct: 65 LPKPNEIKTTLDEYVIGQERAKKV---------------LAVAVYNHYKRLRSSTSRK-- 107
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 108 -----------------------GDE-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 143
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 144 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITR 203
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ++LFICGGAF GL+K I
Sbjct: 204 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSNMLFICGGAFAGLDKVI 261
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + IGF A V++ + L + LV V+ DLV YGLIPEFIGR P++ +
Sbjct: 262 RDRSEKGGIGFSAEVKSKDDSRNLGETLV------DVEPEDLVKYGLIPEFIGRLPVIAT 315
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED LVQ+L EP+NAL +QY ++F M V+L F DDALR +A KAM + TGARGLR
Sbjct: 316 LEELSEDALVQILTEPRNALTKQYARLFEMEGVELDFRDDALRAVAHKAMERKTGARGLR 375
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+++P V V++D + P
Sbjct: 376 SILEGVLLDTMYQVP----SMDDVAKVVIDSHTIKGESDP 411
>gi|145341067|ref|XP_001415637.1| mitochondrial ClpX chaperone [Ostreococcus lucimarinus CCE9901]
gi|144575860|gb|ABO93929.1| mitochondrial ClpX chaperone [Ostreococcus lucimarinus CCE9901]
Length = 524
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 205/404 (50%), Positives = 272/404 (67%), Gaps = 25/404 (6%)
Query: 64 RNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIY 123
R S DLPTPKE+ + LDE+++GQ AKK +L AVYNHYKR+
Sbjct: 102 RTSYAVDDLPTPKEMVRVLDEYIVGQAHAKK-----VL----------SVAVYNHYKRVG 146
Query: 124 HSSLQKELVSDHLYVDSI--LGSGVKSGNCNVEND-EIVELEKSNVLLMGPTGSGKTLLA 180
++ + + + + N EN + V LEKSN+LL GPTGSGKTLLA
Sbjct: 147 AEGERRAREASAAFAQRLDEEDGAFEDENVVDENSLDDVTLEKSNILLCGPTGSGKTLLA 206
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
KTLA+ NVPF I D+T LTQAGYVGED ES+L+KLL A++DV+AAQRGIVYIDE+DK+
Sbjct: 207 KTLAKFANVPFAIADSTTLTQAGYVGEDVESILHKLLQNANYDVQAAQRGIVYIDEIDKL 266
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K+++ + RDVSGEGVQQALLKM+EGT VNVP + G RK+P + +DT +ILFIC
Sbjct: 267 SRKSDNVSITRDVSGEGVQQALLKMVEGTTVNVP--EKGGRKNPNSQFVQLDTTNILFIC 324
Query: 300 GGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIP 359
GGAF GLE I +R SSIGFG PV A + L+ V++GD+V+YGLIP
Sbjct: 325 GGAFTGLESVIQQRLSKSSIGFGKPVIARDEPNSKQAVEAAAKALQEVETGDIVSYGLIP 384
Query: 360 EFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKA 419
EF+GRFP+ V LSAL E +LV +L +P++A+G+QY+++ M+ L +TD+AL LIA+ A
Sbjct: 385 EFVGRFPVCVPLSALGEKELVDILTKPRDAVGKQYQRLLEMHGADLTYTDEALSLIARAA 444
Query: 420 MAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEA 463
+ + TGARGLR LLE +LT+AMFE+P+ +V+ VL+D E+
Sbjct: 445 VKRGTGARGLRTLLERLLTDAMFEVPD----DPTVSEVLIDGES 484
>gi|374575869|ref|ZP_09648965.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Bradyrhizobium sp. WSM471]
gi|386402535|ref|ZP_10087313.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Bradyrhizobium sp. WSM1253]
gi|374424190|gb|EHR03723.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Bradyrhizobium sp. WSM471]
gi|385743161|gb|EIG63357.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Bradyrhizobium sp. WSM1253]
Length = 423
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 201/402 (50%), Positives = 265/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKV---------------LSVAVHNHYKRLNHQTKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGLEKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 258 SARGRSTSIGFAAQVLAPEDRRTG---------EIFRHVEPEDLLKYGLIPEFVGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E L ++L+EPKNAL +QY+++F M N++L F D+AL +A++A+ + TGARG
Sbjct: 309 ATLEDLDEASLKKILVEPKNALVKQYQRLFEMENIELTFADEALGAVARRAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE IL E MF++P G V V++ +E V P
Sbjct: 369 LRSILEAILLETMFDLP----GLEGVEEVVISREVVEGTARP 406
>gi|374292311|ref|YP_005039346.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum
lipoferum 4B]
gi|357424250|emb|CBS87117.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum
lipoferum 4B]
Length = 420
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 200/394 (50%), Positives = 269/394 (68%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I LD++VIGQ AK+ AV+NHYKR+ H
Sbjct: 63 VPTPRDIHAVLDDYVIGQSYAKRV---------------LSVAVHNHYKRLAH------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G K ND VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 101 -------------GTK------HND--VELAKSNILLIGPTGCGKTLLAQTLARIIDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSIIR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTSNILFICGGAFAGLDKII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
++R + +SIGFGA VR+ D T +L V+ DL+ +GLIPEFIGR P+L +
Sbjct: 258 AQRGKGTSIGFGADVRS-------ADERATGEILHEVEPEDLLKFGLIPEFIGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
LS L+E LV++L +PKNAL +QY+++F M +V L F++DA+R IA KA+A+ TGARGLR
Sbjct: 311 LSDLDEGALVEILSKPKNALVKQYQRLFEMEDVHLEFSEDAMRAIAHKAIARKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E IL + MF++P G + + ++LV+KE V
Sbjct: 371 SIMEAILLDPMFDLP----GLTGIESILVNKEVV 400
>gi|409436887|ref|ZP_11264046.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhizobium
mesoamericanum STM3625]
gi|408751361|emb|CCM75200.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhizobium
mesoamericanum STM3625]
Length = 425
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 196/375 (52%), Positives = 258/375 (68%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ +AKK IL AV+NHYKR+ H++ E
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKK-----IL----------SVAVHNHYKRLAHATKNSE- 109
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 110 ---------------------------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+A D +L ++ DLV +GLIPEFIGR P+L +
Sbjct: 261 SARGEKTSIGFGATVKA-------PDDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EPKNAL +QY+++F M +V+L F +DALR IA+KA+ + TGARGLR
Sbjct: 314 LEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELTFHEDALREIARKAIIRKTGARGLR 373
Query: 431 ALLENILTEAMFEIP 445
+++E IL + MFE+P
Sbjct: 374 SIMEKILLDTMFELP 388
>gi|393718796|ref|ZP_10338723.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas
echinoides ATCC 14820]
Length = 422
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 204/402 (50%), Positives = 265/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EIC LD++VIGQ+RAK+ AV+NHYKR+ H
Sbjct: 64 VPTPQEICDVLDDYVIGQKRAKRV---------------LSVAVHNHYKRLNH------- 101
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G K + VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 102 -------------GQKGAD--------VELAKSNILLVGPTGCGKTLLAQTLARILDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI KAE+ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKAENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 201 DVSGEGVQQALLKLMEGTTASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGLEKII 258
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
+R Q SIGFGA V + RTG L+SV+ DL+ +GLIPEF+GR P++
Sbjct: 259 GDRLQGKSIGFGAYVASPEERRTG---------ETLKSVEPEDLLKFGLIPEFVGRLPVI 309
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+ LV +L EPKNAL +QY+K+F M VKL FTDDAL +AKKA+ + TGARG
Sbjct: 310 ATLEDLDVPALVTILTEPKNALVKQYQKLFDMEAVKLGFTDDALVQVAKKAIDRKTGARG 369
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE IL + MF++P G V+ V++DK+ + P
Sbjct: 370 LRSILEGILLDTMFDLP----GMDGVDEVMIDKDVIDGRKEP 407
>gi|410582588|ref|ZP_11319694.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermaerobacter subterraneus DSM 13965]
gi|410505408|gb|EKP94917.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermaerobacter subterraneus DSM 13965]
Length = 419
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 203/401 (50%), Positives = 266/401 (66%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLP P EI LD++VIGQERAKK IL AVYNHYKRI+
Sbjct: 60 DLPKPAEIKAFLDQYVIGQERAKK-----IL----------SVAVYNHYKRIH------- 97
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
LG + VEL+KSN+L++GPTGSGKTLLA+TLA+++NVP
Sbjct: 98 -----------LGGRIDD----------VELQKSNILMIGPTGSGKTLLAQTLAKLLNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E A+RGIVYIDE+DKI KAE+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIERAERGIVYIDEIDKIARKAENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFICGGAF GL+K
Sbjct: 197 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFEGLDKI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I+ R +GFGA VR+ T +L + DL+ +GLIPEF+GR P++
Sbjct: 255 IASRIGRRVMGFGAEVRSKQETN-------VGDILRHIMPEDLLKFGLIPEFVGRLPVIA 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+ED LV++L EPKNAL +QY+K+ +++NV+L F +ALR IA++A+ +NTGARGL
Sbjct: 308 TLDALDEDALVRILTEPKNALVKQYQKLLALDNVELEFEPEALRAIAQEALKRNTGARGL 367
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA++E ++ + M+E+P G V V+V +E V P
Sbjct: 368 RAIVEELMLDLMYELP----GRDDVARVVVTEETVRQRREP 404
>gi|254488366|ref|ZP_05101571.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Roseobacter
sp. GAI101]
gi|214045235|gb|EEB85873.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Roseobacter
sp. GAI101]
Length = 421
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 269/400 (67%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPK+IC LD++VIGQ AKK AV+NHYKR+ H+
Sbjct: 63 VPTPKDICDVLDDYVIGQAMAKKV---------------LSVAVHNHYKRLNHAQ----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G+ +EL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ---------------KGGD--------IELAKSNILLIGPTGCGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +++++VE AQRGIVYIDEVDKI K+E+ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL++ I
Sbjct: 200 DVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDRII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+ R + S++GFGA VR DA + ++ DL+ +GLIPEF+GR P+L +
Sbjct: 258 AARGKGSAMGFGADVRDK-------DARGIGEIFTDLEPEDLLKFGLIPEFVGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED LV +L +PKNAL +QY+++F + + +L FTDDAL IAK+A+ + TGARGLR
Sbjct: 311 LEDLDEDALVTILTQPKNALVKQYQRLFEIEDTQLTFTDDALAAIAKRAIERKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE+IL + MFE+P G +V V+V++EAV S AP
Sbjct: 371 SILEDILLDTMFELP----GMDTVTEVVVNEEAVMSDAAP 406
>gi|357384550|ref|YP_004899274.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pelagibacterium halotolerans B2]
gi|351593187|gb|AEQ51524.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pelagibacterium halotolerans B2]
Length = 425
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 197/399 (49%), Positives = 270/399 (67%), Gaps = 59/399 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P+P +ICK LD++VIGQ RAK+ AV+NHYKR++H++ ++
Sbjct: 65 VPSPADICKVLDDYVIGQRRAKRV---------------LSVAVHNHYKRLHHATKNQD- 108
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 109 ---------------------------VELSKSNILLIGPTGCGKTLLAQTLARILDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++V+ AQRGIVYIDEVDKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIILKLLQAADYNVDKAQRGIVYIDEVDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKVI 259
Query: 311 SERRQDSSIGFGAPVR-ANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ R ++SSIGF A V+ N R G +L V+ D+V +GLIPEFIGR P++
Sbjct: 260 AARGENSSIGFTAAVKDPNDRRVG--------DVLAEVEPEDMVRFGLIPEFIGRLPVIA 311
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+ED LVQ+L EPKNAL RQY ++F M +V+L F +DAL+ +A++A+A+ TGARGL
Sbjct: 312 TLEDLDEDALVQILSEPKNALVRQYARLFEMEDVQLTFHEDALKAVARQAIARKTGARGL 371
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVD 468
R++LE IL + M+++P + V V++ +E V + D
Sbjct: 372 RSILEAILLDTMYDLPSLE----GVEEVVISQEVVENKD 406
>gi|114767021|ref|ZP_01445929.1| ATP-dependent protease ATP-binding subunit [Pelagibaca bermudensis
HTCC2601]
gi|114540805|gb|EAU43869.1| ATP-dependent protease ATP-binding subunit [Roseovarius sp.
HTCC2601]
Length = 421
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 202/416 (48%), Positives = 273/416 (65%), Gaps = 60/416 (14%)
Query: 56 ETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAV 115
E G ++SEG +P+P+EIC LD++VIGQ AK+ AV
Sbjct: 50 EETKGAGLKSSEG---VPSPREICDVLDDYVIGQAMAKRV---------------LSVAV 91
Query: 116 YNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSG 175
+NHYKR+ HS KS + +EL KSN+LL+GPTG G
Sbjct: 92 HNHYKRLNHSQ--------------------KSSD--------IELAKSNILLIGPTGCG 123
Query: 176 KTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYID 235
KTLLA+TLARI++VPFT+ DAT LT+AGYVGED E+++ KLL +++++VE AQRGIVYID
Sbjct: 124 KTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQSSEYNVERAQRGIVYID 183
Query: 236 EVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKD 294
EVDKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +
Sbjct: 184 EVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTN 241
Query: 295 ILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVA 354
ILFICGGAF GL++ I++R + S++GFGA VR G T + + ++ DL+
Sbjct: 242 ILFICGGAFAGLDRIIAQRGKGSAMGFGADVRDPEERG-------TGEVFKDLEPEDLLK 294
Query: 355 YGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRL 414
+GLIPEF+GR P++ +L L+ED LV +L PKNAL +QY+++F M + +L FTDDAL
Sbjct: 295 FGLIPEFVGRLPVIATLEDLDEDALVTILTAPKNALVKQYQRLFEMEDTQLTFTDDALSA 354
Query: 415 IAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
IAKKA+ + TGARGLR++LE IL + MFE+P G V V+V+ EAV S P
Sbjct: 355 IAKKAIERKTGARGLRSILEGILLDTMFELP----GMDEVTEVVVNDEAVNSDAKP 406
>gi|262277076|ref|ZP_06054869.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [alpha
proteobacterium HIMB114]
gi|262224179|gb|EEY74638.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [alpha
proteobacterium HIMB114]
Length = 423
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 203/409 (49%), Positives = 273/409 (66%), Gaps = 59/409 (14%)
Query: 63 NRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRI 122
++N EG +PTPKEI L+E+VIGQ++AK+ IL AV+NHYKR+
Sbjct: 53 SKNEEG---VPTPKEIFSILNEYVIGQKKAKQ-----IL----------SVAVHNHYKRL 94
Query: 123 YHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKT 182
H+ KS N VEL KSN+LL+GPTG GKTLLA+T
Sbjct: 95 GHTE--------------------KSSND-------VELAKSNILLIGPTGCGKTLLAQT 127
Query: 183 LARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV- 241
LA+I++VPFT+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI
Sbjct: 128 LAKILDVPFTMADATTLTEAGYVGEDVENIILKLLQAADYNVEKAQRGIVYIDEVDKISR 187
Query: 242 KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGG 301
K E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFI GG
Sbjct: 188 KTENPSITRDVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFIVGG 245
Query: 302 AFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEF 361
AF G++K IS+R Q SSIGFGA ++ ++ G L++ V+ DL+ +GLIPEF
Sbjct: 246 AFAGIDKIISDRGQGSSIGFGAKIKDKIKKG-------VGELIKDVEPEDLLKFGLIPEF 298
Query: 362 IGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMA 421
IGR PI+ +L L+E+ LVQ+L EPKN+L +QY K+F + VKL F DAL+ IA+KA+
Sbjct: 299 IGRLPIISTLEDLDEESLVQILEEPKNSLTKQYSKLFEIEGVKLTFAKDALKAIAQKAIV 358
Query: 422 KNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+ TGARGLR+++E +L E MF++P V+ V+++KE + P
Sbjct: 359 RKTGARGLRSIIEEVLLETMFDLP----SIEGVDEVILNKEVINGNTKP 403
>gi|398823689|ref|ZP_10582045.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Bradyrhizobium sp. YR681]
gi|398225662|gb|EJN11928.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Bradyrhizobium sp. YR681]
Length = 423
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 201/402 (50%), Positives = 264/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKV---------------LSVAVHNHYKRLNHQTKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 258 SARGRSTSIGFAAQVMAPEDRRTG---------EIFRHVEPEDLLKYGLIPEFVGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E L ++L EPKNAL +QY+++F M N++L F D+AL +A+KA+ + TGARG
Sbjct: 309 ATLEDLDEVSLKKILTEPKNALVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE IL E MF++P G V V++ +E V P
Sbjct: 369 LRSILEAILLETMFDLP----GLEGVEEVVISREVVEGTARP 406
>gi|374262730|ref|ZP_09621293.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
drancourtii LLAP12]
gi|363536954|gb|EHL30385.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
drancourtii LLAP12]
Length = 396
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 262/400 (65%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI K LDE+VIGQ AKK AVYNHYKR+ H S
Sbjct: 36 LPSPKEISKFLDEYVIGQPHAKKV---------------LSVAVYNHYKRLQHKS----- 75
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++ VEL KSN+LL+GPTGSGKTLLA+TLARI+NVPF
Sbjct: 76 ------------------------EDGVELGKSNILLIGPTGSGKTLLAQTLARILNVPF 111
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL D+DV+ AQ+GIVYIDE+DKI K+++ + R
Sbjct: 112 AMADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAQQGIVYIDEIDKISRKSDNPSITR 171
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 172 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSNILFICGGAFAGLDKVI 229
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
ER + SSIGF A ++ ++ S +L ++S DL+ YGLIPEF+GR P++ +
Sbjct: 230 RERSEKSSIGFSAQLKNKK-----DNSEEISKVLSRLESDDLIKYGLIPEFVGRLPVVTT 284
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L++ L+ +L PKNAL +Q++ +F M NV+L F D+AL IAKKA+ + GARGLR
Sbjct: 285 LQELDQGALIDILTNPKNALTKQFQSLFKMENVELEFRDEALVAIAKKALERKMGARGLR 344
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
A+LENIL + M+E+P + VN V++D+ AV + P
Sbjct: 345 AILENILLDTMYELPSLE----GVNKVVIDENAVNNTSKP 380
>gi|389756356|ref|ZP_10191466.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter sp.
115]
gi|388431604|gb|EIL88662.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter sp.
115]
Length = 432
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 198/408 (48%), Positives = 265/408 (64%), Gaps = 56/408 (13%)
Query: 64 RNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIY 123
+ + G LP PKEI + L+++V+GQ RAKK+ AVYNHYKR+
Sbjct: 58 KAASGRTQLPKPKEIMETLNQYVVGQTRAKKA---------------LSVAVYNHYKRM- 101
Query: 124 HSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTL 183
S QK +E VEL KSN+LL+GPTGSGKTLLA+TL
Sbjct: 102 -ESRQK--------------------------NEEVELAKSNILLIGPTGSGKTLLAETL 134
Query: 184 ARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-K 242
AR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DV+ AQ GIVYIDE+DKI K
Sbjct: 135 ARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAQSGIVYIDEIDKISRK 194
Query: 243 AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGA 302
+E+ + RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DTK+ILFICGGA
Sbjct: 195 SENPSITRDVSGEGVQQALLKLIEGTLASVP-PQGG-RKHPQQEFLQVDTKNILFICGGA 252
Query: 303 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFI 362
F GLEK I +R + + IGFGA VR+ RT L LL V+ DLV +GLIPEF+
Sbjct: 253 FAGLEKVIQQRSETTGIGFGAEVRSKERTENL------GKLLAEVEPADLVRFGLIPEFV 306
Query: 363 GRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAK 422
GR P++ +L L+ED LV++L EP+NA+ +Q+K++F M +L F +AL IAK+A+ +
Sbjct: 307 GRLPVVATLDELDEDALVKILTEPRNAVTKQFKRLFEMEGAELEFRPEALSAIAKRALKR 366
Query: 423 NTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
TGARGLR +LE +L + M+E+P + V+ V+VD + P
Sbjct: 367 KTGARGLRTILEQVLLDTMYELPSLE----HVSKVVVDDAVIDGQAEP 410
>gi|217979045|ref|YP_002363192.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylocella
silvestris BL2]
gi|254763855|sp|B8EIL3.1|CLPX_METSB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|217504421|gb|ACK51830.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylocella
silvestris BL2]
Length = 421
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 267/400 (66%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ +AK+ AV+NHYKR+ H++
Sbjct: 63 IPTPKEICKVLDDYVIGQPQAKRV---------------LSVAVHNHYKRLNHATKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+A D T + V+ DL+ +GLIPEF+GR P++ +
Sbjct: 258 STRGKGTSIGFGATVQA-------PDDRRTGEIFRKVEPEDLLKFGLIPEFVGRLPVIAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L ++L EPKNAL +QY+++F M N +L F D+AL ++AKKA+ + TGARGLR
Sbjct: 311 LEDLDEEALKKILTEPKNALVKQYQRLFEMENTELSFQDEALNVVAKKAIERRTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+++E IL + MF++P G SV V++ + V P
Sbjct: 371 SIMEGILLDTMFDLP----GLDSVEQVVIGPDVVEGKSRP 406
>gi|417949952|ref|ZP_12593081.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio splendidus
ATCC 33789]
gi|342807382|gb|EGU42571.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio splendidus
ATCC 33789]
Length = 426
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 262/401 (65%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP+EI + LD++VIGQE AKK AVYNHYKR+
Sbjct: 65 LPTPREIREHLDDYVIGQEYAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 ---------------RNGDTTAEG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV P+P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLVEGTVA--PVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SERRQDSS-IGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + S IGFGA VR+ T + + L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVETGSGIGFGAEVRSKDETKTIGE------LFTQVEPEDLVKYGLIPEFIGRLPVTT 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY +F + + +L F +DALR IAKKAM++ TGARGL
Sbjct: 315 TLTELDEEALIQILCEPKNALTKQYAALFELEDAELEFREDALRAIAKKAMSRKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P ++ V+ V++D+ + P
Sbjct: 375 RSILEGVLLETMYELP----SSTDVSKVVIDESVINGESEP 411
>gi|407768975|ref|ZP_11116352.1| ATP-dependent protease ATP-binding subunit ClpX [Thalassospira
xiamenensis M-5 = DSM 17429]
gi|407287895|gb|EKF13374.1| ATP-dependent protease ATP-binding subunit ClpX [Thalassospira
xiamenensis M-5 = DSM 17429]
Length = 421
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 199/396 (50%), Positives = 270/396 (68%), Gaps = 61/396 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P+P+EICK LD++VIGQ AKK AV+NHYKR++H+S
Sbjct: 63 VPSPQEICKVLDDYVIGQGHAKKV---------------LSVAVHNHYKRLHHAS----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+E +EL KSN++L+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 -----------------------KNEDIELAKSNIMLVGPTGCGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFI GGAF GL+K I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFIVGGAFAGLDKVI 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S+R + S+IGFGA VR+ + RTG +L V+ DL+ +GLIPEFIGR P+L
Sbjct: 258 SQRGKGSAIGFGADVRSPEDRRTG---------EVLREVEPEDLLKFGLIPEFIGRLPVL 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+ED LV++L EPKNAL +QY+++F M +VKL F DAL IAKKA+ + TGARG
Sbjct: 309 ATLEDLDEDALVKILTEPKNALIKQYQRLFDMEDVKLTFQPDALVGIAKKAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
LR+++E IL + MF++P + SV ++++++ V
Sbjct: 369 LRSIMEGILLDTMFDLPTLE----SVEEIVINRDVV 400
>gi|90423894|ref|YP_532264.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodopseudomonas
palustris BisB18]
gi|115524518|ref|YP_781429.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodopseudomonas
palustris BisA53]
gi|122296221|sp|Q07NN5.1|CLPX_RHOP5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|122476340|sp|Q215J1.1|CLPX_RHOPB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|90105908|gb|ABD87945.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodopseudomonas palustris BisB18]
gi|115518465|gb|ABJ06449.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodopseudomonas palustris BisA53]
Length = 424
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 200/402 (49%), Positives = 265/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKV---------------LSVAVHNHYKRLNHQTKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGLEKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 258 SARGRSTSIGFAAQVLAPEDRRTG---------EIFRHVEPEDLLKYGLIPEFVGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E L ++L +PKNAL +QY+++F M N++L F D+AL +A+KA+ + TGARG
Sbjct: 309 ATLEDLDEASLKKILTDPKNALVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE+IL E MF++P G V V++ +E V P
Sbjct: 369 LRSILESILLETMFDLP----GLEGVEEVVISREVVEGTARP 406
>gi|339486804|ref|YP_004701332.1| ATP-dependent protease, ATP-binding subunit ClpX [Pseudomonas
putida S16]
gi|431801809|ref|YP_007228712.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
HB3267]
gi|338837647|gb|AEJ12452.1| ATP-dependent protease, ATP-binding subunit ClpX [Pseudomonas
putida S16]
gi|430792574|gb|AGA72769.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
HB3267]
Length = 427
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 200/400 (50%), Positives = 259/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ + DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKGDE-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGFGA VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTKGGIGFGAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M NV L F DAL+ +A+KA+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYAKLFEMENVDLEFRSDALKAVARKALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP K V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIPSKK----DVSKVVIDESVIDGTSQP 410
>gi|170751515|ref|YP_001757775.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
radiotolerans JCM 2831]
gi|238688765|sp|B1LW29.1|CLPX_METRJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|170658037|gb|ACB27092.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacterium radiotolerans JCM 2831]
Length = 423
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 202/410 (49%), Positives = 271/410 (66%), Gaps = 61/410 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEI + LD++VIGQ+ AKK AV+NHYKR+ H++
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKV---------------LSVAVHNHYKRLAHATKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN++L+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNIMLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLE+ I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S+R + +SIGFGA V+A D T + SV+ DL+ +GLIPEF+GR P+L +
Sbjct: 258 SQRGKGTSIGFGATVQA-------PDDRRTGEIFRSVEPEDLLKFGLIPEFVGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L ++L EPKNAL +QY+++F M NV L F D+AL L+A+KA+ + TGARGLR
Sbjct: 311 LEDLDEAALKKILQEPKNALVKQYQRLFEMENVDLTFQDEALSLVARKAIERKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGD 480
++LE IL + M+++P G SV V++ E V P +HGD
Sbjct: 371 SILETILLDTMYDLP----GLESVEQVVIGPEVVEGKSRP----LYIHGD 412
>gi|71083580|ref|YP_266299.1| ATP-dependent protease ATP-binding subunit ClpX [Candidatus
Pelagibacter ubique HTCC1062]
gi|71062693|gb|AAZ21696.1| ATP-dependent clp proteinase regulatory chain X [Candidatus
Pelagibacter ubique HTCC1062]
Length = 422
Score = 363 bits (933), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 265/400 (66%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEIC LD++VIGQ AKK AV+NHYKR+
Sbjct: 59 LPPPKEICAVLDDYVIGQPHAKKV---------------LSVAVHNHYKRL--------- 94
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + + VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 95 ------------------NYETKTSKTVELSKSNILLVGPTGCGKTLLAQTLARILDVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+E+ + R
Sbjct: 137 TMADATTLTEAGYVGEDVENIILKLLQAADYNVEKAQRGIVYIDEVDKISRKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 197 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S+R + +SIGFGA V+ TD T +++++ DL+ YGLIPEFIGR P++ +
Sbjct: 255 SQRDKGTSIGFGANVKK-------TDDKKTGEWMKTLEPEDLLKYGLIPEFIGRLPMIAT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E LV++L EPKN+L +QY+++F ++ KL F ++A++ IA+KA+ K TGARGLR
Sbjct: 308 LEDLDEKSLVKILQEPKNSLIKQYQELFKLDGAKLSFKENAIKEIAQKAINKKTGARGLR 367
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LENIL + M+++P +V V+VD A + P
Sbjct: 368 SILENILLKTMYDLP----SQDNVEEVIVDASAAKGLSQP 403
>gi|150016210|ref|YP_001308464.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
beijerinckii NCIMB 8052]
gi|189082489|sp|A6LT28.1|CLPX_CLOB8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|149902675|gb|ABR33508.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
beijerinckii NCIMB 8052]
Length = 429
Score = 363 bits (933), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 199/400 (49%), Positives = 266/400 (66%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P P EI + LD +VIGQERAKKS AVYNHYKRI
Sbjct: 60 VPKPNEIKEYLDSYVIGQERAKKS---------------LAVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N N E+ + VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF
Sbjct: 96 ------------------NTNKEDID-VELSKSNILLLGPTGSGKTLLAQTLARFLNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ AD+DVE A+RGI+YIDE+DKI K+E+ + R
Sbjct: 137 AIADATTLTEAGYVGEDVENILLKLIQNADYDVEKAERGIIYIDEIDKIARKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV +VP P G RKHP + I I+T +ILFICGGAF G++K I
Sbjct: 197 DVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQINTSNILFICGGAFDGVDKII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R + SS+GFGA ++A SLL+ + DL+ +GLIPEF+GR PILV+
Sbjct: 255 ENRTRKSSMGFGAQIQAKHEKD-------VGSLLKEIMPADLLKFGLIPEFVGRLPILVT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L +L+++ L+Q+L +PKNAL +QYKK+F +++VKL F + +L IA++A+++ TGARGLR
Sbjct: 308 LESLDKEALIQILTKPKNALVKQYKKLFELDDVKLEFDEKSLIAIAEEAISRQTGARGLR 367
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
A++E+I+ E M+EIP + + V++ +EA+ P
Sbjct: 368 AIIEDIMNEIMYEIP----SDNRITNVIITEEAIKEKKQP 403
>gi|56695905|ref|YP_166256.1| ATP-dependent protease ATP-binding subunit ClpX [Ruegeria pomeroyi
DSS-3]
gi|81350417|sp|Q5LUP9.1|CLPX_SILPO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|56677642|gb|AAV94308.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ruegeria
pomeroyi DSS-3]
Length = 424
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 197/408 (48%), Positives = 276/408 (67%), Gaps = 59/408 (14%)
Query: 64 RNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIY 123
++S+G +PTP++IC LD++VIGQ AK+ AV+NHYKR+
Sbjct: 60 KSSDG---VPTPRDICDVLDDYVIGQSTAKRV---------------LSVAVHNHYKRLN 101
Query: 124 HSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTL 183
H+ K+G+ +EL KSN+LL+GPTG GKTLLA+TL
Sbjct: 102 HAQ--------------------KAGS-------DIELAKSNILLIGPTGCGKTLLAQTL 134
Query: 184 ARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-K 242
ARI++VPFT+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K
Sbjct: 135 ARILDVPFTMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRK 194
Query: 243 AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGA 302
+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGA
Sbjct: 195 SENPSITRDVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGA 252
Query: 303 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFI 362
F GL+K I++R + S++GFGA VRA+ G L ++ DL+ +GLIPEF+
Sbjct: 253 FAGLDKIIAQRGKGSAMGFGADVRASDERG-------VGELFTELEPEDLLKFGLIPEFV 305
Query: 363 GRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAK 422
GR P+L +L L+ED LV +L +PKNAL +QY+++F + + +L FTDDAL+ IAK+A+ +
Sbjct: 306 GRLPVLATLEDLDEDALVTILTKPKNALVKQYQRLFELEDTELDFTDDALKAIAKRAIER 365
Query: 423 NTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
TGARGLR+++E+IL + MF++P +V V+V++EAV S P
Sbjct: 366 KTGARGLRSIMEDILLDTMFDLP----SMDNVTKVVVNEEAVTSDAQP 409
>gi|316933822|ref|YP_004108804.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Rhodopseudomonas palustris DX-1]
gi|315601536|gb|ADU44071.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodopseudomonas palustris DX-1]
Length = 424
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 201/402 (50%), Positives = 265/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQGHAKKV---------------LSVAVHNHYKRLNHQTKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 258 SGRGRSTSIGFAAQVLAPEDRRTG---------EIFRHVEPEDLLKYGLIPEFVGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E L ++L +PKNAL +QY+++F M N++L F D+AL +A+KA+ + TGARG
Sbjct: 309 ATLEDLDETSLKKILTDPKNALVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE+IL E MF++P G V V++ +E V P
Sbjct: 369 LRSILESILLETMFDLP----GLEGVEEVVISREVVEGTARP 406
>gi|91761999|ref|ZP_01263964.1| ATP-dependent clp proteinase regulatory chain X [Candidatus
Pelagibacter ubique HTCC1002]
gi|91717801|gb|EAS84451.1| ATP-dependent clp proteinase regulatory chain X [Candidatus
Pelagibacter ubique HTCC1002]
Length = 422
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 265/400 (66%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEIC LD++VIGQ AKK AV+NHYKR+
Sbjct: 59 LPPPKEICAVLDDYVIGQPHAKKV---------------LSVAVHNHYKRL--------- 94
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + + VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 95 ------------------NYETKTSKTVELSKSNILLVGPTGCGKTLLAQTLARILDVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+E+ + R
Sbjct: 137 TMADATTLTEAGYVGEDVENIILKLLQAADYNVEKAQRGIVYIDEVDKISRKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 197 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S+R + +SIGFGA V+ TD T +++++ DL+ YGLIPEFIGR P++ +
Sbjct: 255 SQRDKGTSIGFGANVKK-------TDDKKTGEWMKTLEPEDLLKYGLIPEFIGRLPMIAT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E LV++L EPKN+L +QY+++F ++ KL F ++A++ IA+KA+ K TGARGLR
Sbjct: 308 LEDLDEKSLVKILQEPKNSLIKQYQELFKLDGAKLSFKENAIKEIAQKAINKKTGARGLR 367
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LENIL + M+++P +V V+VD A + P
Sbjct: 368 SILENILLKTMYDLP----SQDNVEEVIVDASAAKGLSQP 403
>gi|114563761|ref|YP_751274.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella
frigidimarina NCIMB 400]
gi|122299289|sp|Q07ZX9.1|CLPX_SHEFN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|114335054|gb|ABI72436.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
frigidimarina NCIMB 400]
Length = 426
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 264/401 (65%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP E+ K LD++VIGQ++AKK AVYNHYKR+ + +
Sbjct: 65 LPTPHELRKHLDDYVIGQDQAKKV---------------LAVAVYNHYKRLRNGA----- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+K G VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF
Sbjct: 105 --------------IKDG---------VELGKSNILLLGPTGSGKTLLAETLARSLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL D+DVE A+RGIVYIDE+DKI K+++ + R
Sbjct: 142 AMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAERGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLEKVI 259
Query: 311 SERRQDSS-IGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA V+ G D S +L V+ GDLV +GLIPEFIGR P++
Sbjct: 260 EQRAHTGTGIGFGAEVK------GEADKATISQILSQVEPGDLVKFGLIPEFIGRLPVVA 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E LVQ+L EPKNAL +QY +F M +V+L F DDAL+ IA+KAM++ TGARGL
Sbjct: 314 TLTELDEAALVQILSEPKNALTKQYSALFEMEDVELEFRDDALQAIAQKAMSRKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E+IL + M++IP T+ V +VD+ V AP
Sbjct: 374 RSIVESILLDTMYDIPSTQ----GVIKAVVDESVVKGESAP 410
>gi|451818369|ref|YP_007454570.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451784348|gb|AGF55316.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 429
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 197/375 (52%), Positives = 254/375 (67%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P P EI + LD +VIGQERAKKS AVYNHYKRI
Sbjct: 60 VPKPNEIKEYLDSYVIGQERAKKS---------------LAVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N N E + VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF
Sbjct: 96 ------------------NTNKEEMD-VELSKSNILLLGPTGSGKTLLAQTLARFLNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ AD+DVE A+RGI+YIDE+DKI K+E+ + R
Sbjct: 137 AIADATTLTEAGYVGEDVENILLKLIQNADYDVEKAERGIIYIDEIDKIARKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV +VP P G RKHP + I I+T +ILFICGGAF G++K I
Sbjct: 197 DVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQINTSNILFICGGAFDGVDKII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + SS+GFGA ++A SLL+ + DL+ +GLIPEF+GR PILV+
Sbjct: 255 EKRTRKSSMGFGAEIQAKHEKD-------VGSLLKEIMPADLLKFGLIPEFVGRLPILVT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L +L+ + L+Q+L +PKNAL +QYKK+F M++VKL F D +L IA +A+++ TGARGLR
Sbjct: 308 LESLDREALIQILTKPKNALVKQYKKLFEMDDVKLEFDDKSLDAIADEAISRQTGARGLR 367
Query: 431 ALLENILTEAMFEIP 445
A++E+I+ E M+EIP
Sbjct: 368 AIIEDIMNEIMYEIP 382
>gi|296116538|ref|ZP_06835148.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconacetobacter
hansenii ATCC 23769]
gi|295976750|gb|EFG83518.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconacetobacter
hansenii ATCC 23769]
Length = 419
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 200/400 (50%), Positives = 271/400 (67%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EIC LD++VIGQ AKK AV+NHYKR+ HS QK
Sbjct: 62 VPTPREICNILDDYVIGQMHAKKV---------------LSVAVHNHYKRLAHS--QKN- 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VE+ KSN++L+GPTGSGKTLLA+TLARI++VPF
Sbjct: 104 -----------------------ND--VEIAKSNIMLIGPTGSGKTLLAQTLARILDVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 139 TMADATTLTEAGYVGEDVENIILKLLQAADYNVEKAQRGIVYIDEIDKISRKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ++LFICGGAF GL+K I
Sbjct: 199 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNMLFICGGAFAGLDKII 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + S IGFGA V++ D T ++L ++ DL+ +GLIPEFIGR P+L +
Sbjct: 257 SARGKGSGIGFGADVQS-------PDDRRTGAILRDIEPEDLLKFGLIPEFIGRLPVLAT 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+++L +PKNAL +QY ++F M +VKL F+D+AL IA++A+A+ TGARGLR
Sbjct: 310 LEDLDEAALIEILTKPKNALVKQYARLFQMEDVKLTFSDEALSTIAQRAIARRTGARGLR 369
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
A+LE+IL MF++P G +V ++V+K+A + P
Sbjct: 370 AILESILLTTMFDLP----GLKNVEEIVVNKDAAENKAPP 405
>gi|254294161|ref|YP_003060184.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Hirschia
baltica ATCC 49814]
gi|254042692|gb|ACT59487.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Hirschia
baltica ATCC 49814]
Length = 423
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 201/402 (50%), Positives = 271/402 (67%), Gaps = 56/402 (13%)
Query: 64 RNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIY 123
+++EG +PTP+EIC LD++VIGQ +AK+ AV+NHYKR+
Sbjct: 59 KSTEG---VPTPQEICDVLDDYVIGQAQAKRV---------------LAVAVHNHYKRLS 100
Query: 124 HSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTL 183
H+S K+GN VEL KSN+LL+GPTG GKTLLA+TL
Sbjct: 101 HAS--------------------KNGN-------EVELAKSNILLVGPTGCGKTLLAQTL 133
Query: 184 ARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-K 242
ARI++VPFT+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI K
Sbjct: 134 ARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRK 193
Query: 243 AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGA 302
+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ++LFICGGA
Sbjct: 194 SDNPSITRDVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNMLFICGGA 251
Query: 303 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFI 362
F GL+K IS+R Q SSIGFGA V D ++L+ + DLV +GLIPEFI
Sbjct: 252 FAGLDKVISDRGQGSSIGFGATVSD-------PDDRRVGAVLQDCEPEDLVKFGLIPEFI 304
Query: 363 GRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAK 422
GR P++ +L L+ D LV +L +PKNAL +QY+++F M NV+L F+DDAL +A KA+ +
Sbjct: 305 GRLPVIATLEDLDTDSLVMILTQPKNALLKQYQRLFDMENVQLTFSDDALTGVANKAIQR 364
Query: 423 NTGARGLRALLENILTEAMFEIPETK-IGTSSVNAVLVDKEA 463
TGARGLR++LE IL + MFE+P + I +NA +V+ A
Sbjct: 365 RTGARGLRSILEGILLDTMFELPNLRGIEEVVINAEVVEGRA 406
>gi|222085565|ref|YP_002544095.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
radiobacter K84]
gi|221723013|gb|ACM26169.1| ATP-dependent Clp protease [Agrobacterium radiobacter K84]
Length = 470
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 199/394 (50%), Positives = 268/394 (68%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ +AKK IL AV+NHYKR+ H+S
Sbjct: 111 VPTPQDIIKVLDEYVIGQRQAKK-----IL----------SVAVHNHYKRLAHAS----- 150
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G+ VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 151 ---------------KNGD--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 187
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 188 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 247
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 248 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 305
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+ D +L ++ DLV +GLIPEFIGR P+L +
Sbjct: 306 SARGEKTSIGFGAAVKG-------PDDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLAT 358
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EPKNAL +QY+++F M +V+L+F +DALR IA++A+ + TGARGLR
Sbjct: 359 LEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELNFHEDALREIARRAIVRKTGARGLR 418
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E IL + MF++P V V++ +E V
Sbjct: 419 SIMEKILLDTMFDLP----ALEGVREVVISEEVV 448
>gi|329889320|ref|ZP_08267663.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
diminuta ATCC 11568]
gi|328844621|gb|EGF94185.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
diminuta ATCC 11568]
Length = 422
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 197/375 (52%), Positives = 255/375 (68%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEI LD++VIGQ AKK AV+NHYKR+ H++
Sbjct: 63 VPTPKEIRDVLDDYVIGQSHAKKV---------------LSVAVHNHYKRLNHATKN--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN++L+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNIMLIGPTGSGKTLLAQTLARIIDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFI GGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTANILFIVGGAFAGLEKVI 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+ D T +L+ V+ DL+ +GLIPEFIGR P+L +
Sbjct: 258 SARGEGASIGFGAKVKE-------IDERRTGEILKQVEPDDLMRFGLIPEFIGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+++L EPKNAL +QYK++F M NV L FTDDAL +AKKA+ + TGARGLR
Sbjct: 311 LEDLDEVALIKILTEPKNALVKQYKRLFEMENVTLTFTDDALSAVAKKAITRKTGARGLR 370
Query: 431 ALLENILTEAMFEIP 445
++LE +L E MFE+P
Sbjct: 371 SILEGVLLETMFELP 385
>gi|383317430|ref|YP_005378272.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Frateuria
aurantia DSM 6220]
gi|379044534|gb|AFC86590.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Frateuria
aurantia DSM 6220]
Length = 430
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 201/408 (49%), Positives = 265/408 (64%), Gaps = 56/408 (13%)
Query: 64 RNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIY 123
+ + G LP P+EI LD++V+GQ RAKKS AVYNHYKRI
Sbjct: 58 KAASGRSHLPKPREIMDALDQYVVGQTRAKKS---------------LAVAVYNHYKRI- 101
Query: 124 HSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTL 183
S QK +DE VEL KSN+LL+GPTGSGKTLLA+TL
Sbjct: 102 -ESRQK-------------------------SDE-VELGKSNILLIGPTGSGKTLLAETL 134
Query: 184 ARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-K 242
AR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K
Sbjct: 135 ARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQSGIVYIDEIDKISRK 194
Query: 243 AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGA 302
+E+ + RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DTK+ILFI GGA
Sbjct: 195 SENPSITRDVSGEGVQQALLKLIEGTLASVP-PQGG-RKHPQQEFLQVDTKNILFIVGGA 252
Query: 303 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFI 362
F GL+K I +R + + IGF A VR+ RT L LL V+ GDLV YGLIPEF+
Sbjct: 253 FAGLDKVIQQRAETTGIGFSAEVRSKERTTNL------GRLLADVEPGDLVRYGLIPEFV 306
Query: 363 GRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAK 422
GR P++ +L L+E LV++L EPKNA+ +Q+K++F M +L F +AL+ IA+KA+ +
Sbjct: 307 GRLPVIATLDELDEAALVKILTEPKNAVTKQFKRLFEMEEAELEFRPEALQAIARKALKR 366
Query: 423 NTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
TGARGLR +LE +L + M+E+P + V+ V+VD+ + P
Sbjct: 367 KTGARGLRTILEQVLLDTMYELPSLE----HVSKVVVDETVIDGQSEP 410
>gi|295689636|ref|YP_003593329.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Caulobacter
segnis ATCC 21756]
gi|295431539|gb|ADG10711.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Caulobacter
segnis ATCC 21756]
Length = 420
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 199/377 (52%), Positives = 255/377 (67%), Gaps = 57/377 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EIC+ LD++VIGQ AKK AV+NHYKR+ H+S
Sbjct: 63 VPTPREICEVLDDYVIGQGHAKKV---------------LAVAVHNHYKRLNHASKN--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTG+GKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLVGPTGTGKTLLAQTLARIIDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIVLKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 257
Query: 311 SERRQDSSIGFGAPVR--ANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R SIGFGA V RTG +L +V+ DL +GLIPEFIGR P++
Sbjct: 258 SARGAAKSIGFGAKVTDPEERRTG---------EILRNVEPDDLQRFGLIPEFIGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E LV++L EPKNA +QY+++F M N+ L FTDDAL +AKKA+A+ TGARG
Sbjct: 309 ATLEDLDEAALVKILTEPKNAFVKQYQRLFEMENIGLTFTDDALHQVAKKAIARKTGARG 368
Query: 429 LRALLENILTEAMFEIP 445
LR+++E IL E MFE+P
Sbjct: 369 LRSIMEGILLETMFELP 385
>gi|292670225|ref|ZP_06603651.1| ATP-dependent Clp protease ATP-binding subunit [Selenomonas noxia
ATCC 43541]
gi|292648177|gb|EFF66149.1| ATP-dependent Clp protease ATP-binding subunit [Selenomonas noxia
ATCC 43541]
Length = 421
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 261/401 (65%), Gaps = 56/401 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI LD++VIGQ+ AKKS AVYNHYKRI
Sbjct: 60 DIPKPKEIRHILDQYVIGQDEAKKS---------------LSVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N +E VEL KSN+L++GPTGSGKTLLA+TLARI+NVP
Sbjct: 97 -------------------NAGQNKNEDVELRKSNILMLGPTGSGKTLLAQTLARILNVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E AQRGI+YIDE+DKI K+E+ +
Sbjct: 138 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAQRGIIYIDEIDKIARKSENPSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT +VP P G RKHP+ + + IDT +ILFICGGAF G+E+
Sbjct: 198 RDVSGEGVQQALLKILEGTTASVP-PQGG-RKHPQQELLQIDTTNILFICGGAFDGIEEI 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R +GFGA VR+ R + +LL V DL+ GLIPEFIGR P++V
Sbjct: 256 IESRLGKKQMGFGAQVRSKKR-------VTVGALLSKVIPEDLMKNGLIPEFIGRLPVVV 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L++L+E LV++L EPKNAL +Q++K+ ++ V+L F DDALRLIAK+A+ TGARGL
Sbjct: 309 TLNSLDEKALVRILTEPKNALVKQFQKLLELDGVRLTFEDDALRLIAKEALTHKTGARGL 368
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E I+ M+E+P + V A V K+ + + P
Sbjct: 369 RSIIEGIMRNVMYEVPSIQ----GVTACQVTKDVIANRSDP 405
>gi|254429578|ref|ZP_05043285.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Alcanivorax
sp. DG881]
gi|196195747|gb|EDX90706.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Alcanivorax
sp. DG881]
Length = 426
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 204/400 (51%), Positives = 259/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LDE+VIGQERAKK AVYNHYKR
Sbjct: 65 LPKPNEIKDTLDEYVIGQERAKKV---------------LAVAVYNHYKR---------- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
L SG K DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 100 ----------LRSGGKG------RDE-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ++LFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSNMLFICGGAFAGLDKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
ER + IGF A V++ T L + LV V+ DLV YGLIPEFIGR P++ +
Sbjct: 261 RERSEKGGIGFSAEVKSKDNTRNLGELLV------DVEPEDLVKYGLIPEFIGRLPVIAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EP+NAL +QY ++F M V+L F DDALR IA KAM + TGARGLR
Sbjct: 315 LEELSEEALIQILTEPRNALTKQYARLFEMEGVELDFRDDALRAIANKAMVRKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+++P SV V++D + P
Sbjct: 375 SILEGVLLDTMYQVP----SMDSVAKVVIDSPTIKGESEP 410
>gi|406942058|gb|EKD74393.1| hypothetical protein ACD_44C00469G0003 [uncultured bacterium]
Length = 422
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 202/416 (48%), Positives = 261/416 (62%), Gaps = 58/416 (13%)
Query: 56 ETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAV 115
E +N N+ LPTP EICK LDE+VIGQ AKK+ AV
Sbjct: 49 EVQNTQSTDNTLSK--LPTPAEICKILDEYVIGQSIAKKT---------------LSVAV 91
Query: 116 YNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSG 175
YNHYK++ N D VEL KSN+LL+GPTGSG
Sbjct: 92 YNHYKKLR----------------------------NKHKDGDVELNKSNILLIGPTGSG 123
Query: 176 KTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYID 235
KTLLA+TLAR++NVPF I DAT LT+AGYVGED E+++ KLL D+DV AQ GIVYID
Sbjct: 124 KTLLAETLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAQTGIVYID 183
Query: 236 EVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKD 294
E+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + I +DTK+
Sbjct: 184 EIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFIQVDTKN 241
Query: 295 ILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVA 354
ILFICGGAF GLEK I ER + S IGF A + + DA LL V+ DL+
Sbjct: 242 ILFICGGAFAGLEKVIRERSEKSGIGFSAEIHSK------EDAKSIDQLLHEVEPADLIR 295
Query: 355 YGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRL 414
+GLIPE IGR P++ +L L+++ L+++L EPKNAL +QY+K+F M V L F D AL+L
Sbjct: 296 FGLIPELIGRLPVVATLEELDKEVLLRILTEPKNALVKQYRKLFEMEGVSLEFRDTALQL 355
Query: 415 IAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
IA++++ K TGARGLR++LE L + M+E+P S V V+VD+ + +P
Sbjct: 356 IAERSVEKKTGARGLRSILEKTLLDIMYELP----SLSHVTKVIVDESCIKGESSP 407
>gi|440226209|ref|YP_007333300.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhizobium
tropici CIAT 899]
gi|440037720|gb|AGB70754.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhizobium
tropici CIAT 899]
Length = 425
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 200/394 (50%), Positives = 267/394 (67%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ +AKK IL AV+NHYKR+ H+S
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKK-----IL----------SVAVHNHYKRLAHAS----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G+ VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KNGD--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+A D +L ++ DLV +GLIPEFIGR P+L +
Sbjct: 261 SARGEKTSIGFGATVKA-------PDDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ D L+Q+L EPKNAL +QY+++F M +V+L F +DALR IA++A+ + TGARGLR
Sbjct: 314 LEDLDADALIQILSEPKNALVKQYQRLFEMEDVELTFHEDALREIARRAIVRKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E IL + MFE+P V V++ +E V
Sbjct: 374 SIMEKILLDTMFELP----ALEGVREVVISEEVV 403
>gi|402486167|ref|ZP_10832999.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium sp. CCGE
510]
gi|401814823|gb|EJT07153.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium sp. CCGE
510]
Length = 425
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 200/394 (50%), Positives = 267/394 (67%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ +AKK IL AV+NHYKR+ H+S
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKK-----IL----------SVAVHNHYKRLAHAS----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KNGE--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+A D +L ++ DLV +GLIPEFIGR P+L +
Sbjct: 261 SARGEKTSIGFGATVKAQ-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EPKNAL +QY+++F M +V+L F +DALR A+KA+ + TGARGLR
Sbjct: 314 LEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELTFHEDALRETARKAIVRKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E IL + MFE+P + V V++ +E V
Sbjct: 374 SIMEKILLDTMFELPTLE----GVREVVISEEVV 403
>gi|307151648|ref|YP_003887032.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cyanothece sp.
PCC 7822]
gi|306981876|gb|ADN13757.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cyanothece
sp. PCC 7822]
Length = 446
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 200/411 (48%), Positives = 267/411 (64%), Gaps = 51/411 (12%)
Query: 58 ENGNRNRNSEGNIDL---PTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCA 114
E + RNS + L P P+EI K LDE+VIGQ AKK A
Sbjct: 62 EERPKRRNSRERLTLGQIPKPREIKKYLDEYVIGQNEAKKV---------------LSVA 106
Query: 115 VYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGS 174
VYNHYKR+ S +Q + +SG ++ D+ +EL+KSN+LLMGPTGS
Sbjct: 107 VYNHYKRL--SDIQSK----------------RSGTGSI--DDPIELQKSNILLMGPTGS 146
Query: 175 GKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYI 234
GKTLLA+TLA+I++VPF + DAT LT+AGYVGED E++L +LL AD DVE AQRGI+YI
Sbjct: 147 GKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGIIYI 206
Query: 235 DEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTK 293
DE+DKI K+E+ + RDVSGEGVQQALLKMLEGT+ NVP P G RKHP D I IDT
Sbjct: 207 DEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTIANVP-PQGG-RKHPYQDCIQIDTS 264
Query: 294 DILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLV 353
+ILFICGGAFVGL+K + +R S+GF P N + T+ LL+ ++ DLV
Sbjct: 265 NILFICGGAFVGLDKIVEQRLGKKSMGFIQPGDGNAKDKR------TADLLKVIEPDDLV 318
Query: 354 AYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALR 413
+G+IPEF+GR P++ SL L+E+ L+ +L +P+NAL +QY+K+ M+NV+L F DA+R
Sbjct: 319 KFGMIPEFVGRIPVMASLDPLDEEALIAILTQPRNALVKQYQKLLKMDNVQLEFKSDAVR 378
Query: 414 LIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
IA++A + TGAR LR ++E ++ E M+E+P K V L+ +E V
Sbjct: 379 AIAQEAYRRKTGARALRGIVEELMLEVMYELPSRK----DVKRCLITREMV 425
>gi|92117751|ref|YP_577480.1| ATP-dependent protease ATP-binding subunit ClpX [Nitrobacter
hamburgensis X14]
gi|122417675|sp|Q1QL77.1|CLPX_NITHX RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91800645|gb|ABE63020.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Nitrobacter
hamburgensis X14]
Length = 424
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 201/402 (50%), Positives = 265/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQGHAKKV---------------LSVAVHNHYKRLNHQTKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGLEKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 258 SARGRTTSIGFAAQVLAPEDRRTG---------EIFRHVEPEDLLKYGLIPEFVGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E L ++L +PKNAL +QY+++F M N++L F D+AL IA+KA+ + TGARG
Sbjct: 309 ATLEDLDEASLKKILTDPKNALVKQYQRLFEMENIELTFADEALGAIARKAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE+IL E MF++P G V V++ +E V P
Sbjct: 369 LRSILESILLETMFDLP----GLEGVEEVVISREVVEGTARP 406
>gi|452964827|gb|EME69860.1| ATP-dependent protease ATP-binding subunit ClpX [Magnetospirillum
sp. SO-1]
Length = 421
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 197/394 (50%), Positives = 266/394 (67%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPK+IC LD++VIGQ AKK AV+NHYKR+ H
Sbjct: 63 VPTPKDICAVLDDYVIGQGHAKKV---------------LSVAVHNHYKRLQHGG----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+N+E VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ----------------------KNNE-VELAKSNILLIGPTGCGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AA+++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAAEYNVERAQRGIVYIDEVDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +V P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASV--PPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R + +SIGFGA VR D T +L V+ DL+ +GLIPEF+GR P+L +
Sbjct: 258 GSRGRGTSIGFGADVRG-------PDERRTGEILREVEPEDLLKFGLIPEFVGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ D L+ +L +PKNAL +QY+++F M + +L F+DDAL+ IA+KA+A+ TGARGLR
Sbjct: 311 LEDLDVDALIDILSKPKNALVKQYQRLFEMEDTRLAFSDDALKSIAEKAIARKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E+IL + MF++P G +V+ V+++KE V
Sbjct: 371 SIMESILLDTMFDLP----GLDAVDEVVINKEVV 400
>gi|409426235|ref|ZP_11260797.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
HYS]
Length = 427
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 200/400 (50%), Positives = 259/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISTILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ +ND+ VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKNDD-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGFGA VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QARSTRGGIGFGAEVRSKQEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +A+KA+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRSDALKSVARKALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE IL + M+EIP K V+ V++D+ + P
Sbjct: 375 SILEGILLDTMYEIPSQK----DVSKVVIDESVIDGSSQP 410
>gi|420238691|ref|ZP_14743074.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. CF080]
gi|398085331|gb|EJL75991.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. CF080]
Length = 425
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 197/377 (52%), Positives = 262/377 (69%), Gaps = 57/377 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ++AK+ IL AV+NHYKR+ H+S
Sbjct: 66 VPTPQDIIKVLDEYVIGQKQAKR-----IL----------SVAVHNHYKRLAHAS----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G+ VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KGGD--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGFGA V++ + R G +L ++ DLV +GLIPEFIGR P+L
Sbjct: 261 SARGEKTSIGFGASVKSAEDRRVG---------EVLRELEPEDLVKFGLIPEFIGRLPVL 311
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+ED L+Q+L EPKNAL +QY+++F M +V L F +DALR IAK+A+ + TGARG
Sbjct: 312 ATLEDLDEDALIQILSEPKNALIKQYQRLFEMEDVDLTFHEDALREIAKRAITRKTGARG 371
Query: 429 LRALLENILTEAMFEIP 445
LR+++E IL + MFE+P
Sbjct: 372 LRSIMEKILLDTMFELP 388
>gi|110834072|ref|YP_692931.1| ATP-dependent protease ATP-binding subunit ClpX [Alcanivorax
borkumensis SK2]
gi|123345580|sp|Q0VQ89.1|CLPX_ALCBS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|110647183|emb|CAL16659.1| ATP-dependent Clp protease, ATP-binding subunitClpX [Alcanivorax
borkumensis SK2]
Length = 426
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 203/400 (50%), Positives = 261/400 (65%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LDE+VIGQERAKK AVYNHYKR
Sbjct: 65 LPKPNEIKDTLDEYVIGQERAKKV---------------LAVAVYNHYKR---------- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
L SG K DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 100 ----------LRSGGKG------RDE-VELGKSNILLIGPTGSGKTLLAETLARMLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ++LFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSNMLFICGGAFAGLDKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
ER + IGF A V++ T L + LV V+ DLV YGLIPEFIGR P++ +
Sbjct: 261 RERSEKGGIGFSAEVKSKDNTRNLGELLV------DVEPEDLVKYGLIPEFIGRLPVIAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EP+NAL +QY ++F M V+L F +DAL+ IA KAM + TGARGLR
Sbjct: 315 LEELSEDALIQILTEPRNALTKQYARLFEMEGVELDFREDALKAIANKAMVRKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE++L + M+++P + SV V++D + P
Sbjct: 375 SILESVLLDTMYQVPSME----SVAKVVIDSPTIKGESEP 410
>gi|398378315|ref|ZP_10536479.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. AP16]
gi|397725069|gb|EJK85525.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. AP16]
Length = 425
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 199/394 (50%), Positives = 268/394 (68%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ +AKK IL AV+NHYKR+ H+S
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKK-----IL----------SVAVHNHYKRLAHAS----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G+ VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KNGD--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+ D +L ++ DLV +GLIPEFIGR P+L +
Sbjct: 261 SARGEKTSIGFGAAVKG-------PDDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EPKNAL +QY+++F M +V+L+F +DALR IA++A+ + TGARGLR
Sbjct: 314 LEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELNFHEDALREIARRAIVRKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E IL + MF++P V V++ +E V
Sbjct: 374 SIMEKILLDTMFDLP----ALEGVREVVISEEVV 403
>gi|336311089|ref|ZP_08566056.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella sp.
HN-41]
gi|335865305|gb|EGM70331.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella sp.
HN-41]
Length = 426
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 206/404 (50%), Positives = 261/404 (64%), Gaps = 57/404 (14%)
Query: 69 NIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQ 128
N LPTP E+ LD++VIGQ+RAKK AVYNHYKR+ +SS
Sbjct: 62 NDKLPTPHELRAHLDDYVIGQDRAKKV---------------LSVAVYNHYKRLKNSS-- 104
Query: 129 KELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVN 188
K G VEL KSN+LL+GPTGSGKTLLA+TLAR +N
Sbjct: 105 -----------------PKDG---------VELGKSNILLIGPTGSGKTLLAETLARSLN 138
Query: 189 VPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRN 247
VPFT+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ +
Sbjct: 139 VPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPS 198
Query: 248 NGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLE 307
RDVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GLE
Sbjct: 199 ITRDVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLE 256
Query: 308 KTISERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFP 366
K I +R S IGFGA V+ G + S L V+ GDLV YGLIPEFIGR P
Sbjct: 257 KVIEQRAHVGSGIGFGAQVK------GEKEKATISETLSQVEPGDLVKYGLIPEFIGRLP 310
Query: 367 ILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGA 426
++ +L+ L+E+ LVQ+L +PKNAL +QY +F M V+L F +DAL+ IA KAM++ TGA
Sbjct: 311 VVATLTELDEEALVQILSQPKNALTKQYSALFEMEGVELEFREDALKAIAHKAMSRKTGA 370
Query: 427 RGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RGLR+++E IL + M++IP T+ V +VD+ V AP
Sbjct: 371 RGLRSIVEGILLDTMYDIPSTE----GVVKAVVDESVVNGESAP 410
>gi|323136624|ref|ZP_08071705.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylocystis
sp. ATCC 49242]
gi|322397941|gb|EFY00462.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylocystis
sp. ATCC 49242]
Length = 422
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 195/394 (49%), Positives = 265/394 (67%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EICK LD++VIGQ +AK+ AV+NHYKR+ H++
Sbjct: 63 IPTPREICKVLDDYVIGQAQAKRV---------------LSVAVHNHYKRLNHAT----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G+ VEL KSN+LL+GPTG GKT+LA+TLARI++VPF
Sbjct: 103 ---------------KHGD--------VELAKSNILLIGPTGVGKTMLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVY+DE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYVDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+A D T + V DL+ +GLIPEF+GR P++ +
Sbjct: 258 SARGRSTSIGFGATVQA-------PDDRRTGDIFRQVQPEDLLKFGLIPEFVGRLPVIAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L ++L EPKNAL +QY+++F M NV+L F DDAL +A+KA+ ++TGARGLR
Sbjct: 311 LEDLDEDALKKILTEPKNALVKQYQRLFEMENVELTFQDDALSAVARKAIERHTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E IL + MF++P G V V++ E V
Sbjct: 371 SIMEGILLDTMFDLP----GLEGVEQVVIGPEVV 400
>gi|395493606|ref|ZP_10425185.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas sp.
PAMC 26617]
gi|404253933|ref|ZP_10957901.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas sp.
PAMC 26621]
Length = 422
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 202/402 (50%), Positives = 265/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EIC LD++VIGQ+RAK+ AV+NHYKR+ H
Sbjct: 64 VPTPQEICDVLDDYVIGQKRAKRV---------------LSVAVHNHYKRLNH------- 101
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G K + VEL KSN+LLMGPTG GKTLLA+TLARI++VPF
Sbjct: 102 -------------GQKGAD--------VELAKSNILLMGPTGCGKTLLAQTLARILDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI KAE+ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKAENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT +ILFICGGAF G+EK I
Sbjct: 201 DVSGEGVQQALLKLMEGTTASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGIEKII 258
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
+R Q SIGFGA V + RTG L++V+ DL+ +GLIPEF+GR P++
Sbjct: 259 GDRLQGKSIGFGAYVASPEERRTG---------ETLKAVEPEDLLKFGLIPEFVGRLPVI 309
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+ LV +L EPKNAL +QY+K+F M VKL FTD+AL +AKKA+ + TGARG
Sbjct: 310 ATLEDLDVPALVTILTEPKNALVKQYQKLFDMETVKLGFTDEALVQVAKKAIDRKTGARG 369
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE IL + MF++P G V+ V++DK+ + P
Sbjct: 370 LRSILEGILLDTMFDLP----GMDGVDEVMIDKDVIDGRKEP 407
>gi|407785098|ref|ZP_11132246.1| ATP-dependent protease ATP-binding subunit ClpX [Celeribacter
baekdonensis B30]
gi|407203130|gb|EKE73117.1| ATP-dependent protease ATP-binding subunit ClpX [Celeribacter
baekdonensis B30]
Length = 421
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 200/436 (45%), Positives = 287/436 (65%), Gaps = 71/436 (16%)
Query: 36 EIMGGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKS 95
E+ IR++ +S+G++S SEG +P P++IC+ LD++VIGQ AK+
Sbjct: 42 ELCMDIIREETKSSGLKS------------SEG---VPAPRDICQVLDDYVIGQATAKRV 86
Query: 96 HIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEN 155
AV+NHYKR+ H++ GN +
Sbjct: 87 ---------------LSVAVHNHYKRLNHAA---------------------KGNGD--- 107
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
+EL KSN+LL+GPTG GKTLLA+TLARI++VPFT+ DAT LT+AGYVGED E+++ K
Sbjct: 108 ---IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILK 164
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
LL A++++VE AQRGIVYIDEVDKI K+++ + RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 LLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP- 223
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
P G RKHP+ + + +DT +ILFICGGAF GL++ I++R + +++GFGA V+ + G
Sbjct: 224 PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRNKGTAMGFGADVKNDEDKG-- 280
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
+ + ++ DL+ +GLIPEF+GR P+L +L L+ED LV +L +PKNAL +QY
Sbjct: 281 -----VGEMFKQLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTQPKNALVKQY 335
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSV 454
+++F + N KL FT+DAL IAK+A+ + TGARGLR++LE+IL + MFE+P G +V
Sbjct: 336 QRLFELENAKLTFTEDALTSIAKRAIERKTGARGLRSILEDILLDTMFELP----GMDNV 391
Query: 455 NAVLVDKEAVGSVDAP 470
V+V+++AV S P
Sbjct: 392 TEVVVNEDAVMSSAKP 407
>gi|182679146|ref|YP_001833292.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Beijerinckia
indica subsp. indica ATCC 9039]
gi|238691227|sp|B2IGP2.1|CLPX_BEII9 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|182635029|gb|ACB95803.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Beijerinckia
indica subsp. indica ATCC 9039]
Length = 421
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 196/400 (49%), Positives = 267/400 (66%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EICK LD++VIGQ +AK+ AV+NHYKR+ H++
Sbjct: 63 IPTPREICKVLDDYVIGQPQAKRV---------------LSVAVHNHYKRLNHATKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGF A V+A D T + V+ DL+ +GLIPEF+GR P++ +
Sbjct: 258 STRGKTTSIGFAASVQA-------PDDRRTGEIFRKVEPEDLLKFGLIPEFVGRLPVIAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L ++L EPKNAL +QY+++F M N +L F D+AL ++AKKA+ + TGARGLR
Sbjct: 311 LEDLDEEALKKILTEPKNALVKQYQRLFEMENTELTFQDEALNVVAKKAIERKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+++E+IL + MF++P G SV V++ + V P
Sbjct: 371 SIMESILLDTMFDLP----GLDSVEQVVIGPDVVEGKSRP 406
>gi|407775743|ref|ZP_11123035.1| ATP-dependent protease ATP-binding subunit ClpX [Thalassospira
profundimaris WP0211]
gi|407281104|gb|EKF06668.1| ATP-dependent protease ATP-binding subunit ClpX [Thalassospira
profundimaris WP0211]
Length = 421
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 265/400 (66%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P+P+EICK LD++VIGQ AKK AV+NHYKR++HSS
Sbjct: 63 VPSPQEICKVLDDYVIGQGHAKKV---------------LSVAVHNHYKRLHHSS----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+E +EL KSN++L+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 -----------------------KNEDIELAKSNIMLVGPTGCGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFI GGAF GL+K I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFIVGGAFAGLDKVI 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S+R + S+IGFGA VR D +L V+ DL+ +GLIPEFIGR P+L +
Sbjct: 258 SQRGRGSAIGFGADVRG-------PDERRAGDVLREVEPEDLLKFGLIPEFIGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ + LVQ+L EPKNAL +QY+++F M +VKL F DAL+ IA KA+ + TGARGLR
Sbjct: 311 LEDLDNEALVQILTEPKNALIKQYQRLFDMEDVKLTFQTDALKAIADKAIERKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+++E IL E MF++P + SV ++++ + V P
Sbjct: 371 SIMEGILLETMFDLPTME----SVEEIVINADVVNGKAKP 406
>gi|126668932|ref|ZP_01739873.1| ATP-dependent protease ATP-binding subunit [Marinobacter sp. ELB17]
gi|126626595|gb|EAZ97251.1| ATP-dependent protease ATP-binding subunit [Marinobacter sp. ELB17]
Length = 427
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 199/416 (47%), Positives = 268/416 (64%), Gaps = 60/416 (14%)
Query: 58 ENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYN 117
E N E + LPTP EI + L+E+VIGQ+RAK + AVYN
Sbjct: 53 EEIQENAQEEASDRLPTPAEIRETLNEYVIGQDRAK---------------VVLAVAVYN 97
Query: 118 HYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKT 177
HYKR+ + E VEL KSN+LL+GPTGSGKT
Sbjct: 98 HYKRLRYG----------------------------EGKADVELGKSNILLIGPTGSGKT 129
Query: 178 LLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEV 237
LLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+
Sbjct: 130 LLAETLARVLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEI 189
Query: 238 DKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDIL 296
DKI K+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + ++T +IL
Sbjct: 190 DKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVNTSNIL 247
Query: 297 FICGGAFVGLEKTISERRQDSSIGFGAPV--RANMRTGGLTDALVTSSLLESVDSGDLVA 354
FICGGAF GLEK I +R SSIGF A V + N+++ G +++ V + DLV
Sbjct: 248 FICGGAFAGLEKVIQQRSARSSIGFSAEVASKDNIKSAG--------EIIKDVQTEDLVK 299
Query: 355 YGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRL 414
+GLIPEF+GR P++ +L+ L+ED L+Q+L EPKNAL +QY+K+F M V+L F ++ALR
Sbjct: 300 FGLIPEFVGRLPVVATLTELDEDALIQILTEPKNALTKQYQKLFEMEGVELDFREEALRA 359
Query: 415 IAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+A+KA +NTGARGLR+++E L + M++IP + V V+VD+ + P
Sbjct: 360 VARKAKERNTGARGLRSIMEATLLDTMYQIPSEQ----DVCKVVVDESVISGDSEP 411
>gi|24373361|ref|NP_717404.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
oneidensis MR-1]
gi|46576583|sp|Q8EG18.1|CLPX_SHEON RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|24347624|gb|AAN54848.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
oneidensis MR-1]
Length = 426
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 207/404 (51%), Positives = 259/404 (64%), Gaps = 57/404 (14%)
Query: 69 NIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQ 128
N LPTP E+ LD++VIGQ+RAKK AVYNHYKR+ +SS
Sbjct: 62 NDKLPTPHELRAHLDDYVIGQDRAKKV---------------LSVAVYNHYKRLKNSS-- 104
Query: 129 KELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVN 188
K G VEL KSN+LL+GPTGSGKTLLA+TLAR +N
Sbjct: 105 -----------------PKDG---------VELGKSNILLIGPTGSGKTLLAETLARSLN 138
Query: 189 VPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRN 247
VPFT+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ +
Sbjct: 139 VPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPS 198
Query: 248 NGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLE 307
RDVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GLE
Sbjct: 199 ITRDVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLE 256
Query: 308 KTISERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFP 366
K I +R S IGFGA V+ G D S L V+ GDLV YGLIPEFIGR P
Sbjct: 257 KVIEQRAHVGSGIGFGAQVK------GEKDKATISETLSQVEPGDLVKYGLIPEFIGRLP 310
Query: 367 ILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGA 426
++ +L+ L+E+ LVQ+L EPKNAL +QY +F M V+L F +DAL+ IA KAM++ TGA
Sbjct: 311 VVATLTELDEEALVQILSEPKNALTKQYNALFEMEGVELEFREDALKAIAHKAMSRKTGA 370
Query: 427 RGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RGLR+++E IL + M++IP V +VD+ V AP
Sbjct: 371 RGLRSIVEGILLDTMYDIP----SIDGVVKAVVDESVVNGESAP 410
>gi|255263549|ref|ZP_05342891.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thalassiobium
sp. R2A62]
gi|255105884|gb|EET48558.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thalassiobium
sp. R2A62]
Length = 422
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 200/414 (48%), Positives = 274/414 (66%), Gaps = 60/414 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEIC+ LD++VIGQ AK+ AV+NHYKR+ H++
Sbjct: 63 VPTPKEICEVLDDYVIGQSHAKRV---------------LSVAVHNHYKRLNHAA----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KSG +EL KSN++L+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ---------------KSGGD-------IELAKSNIMLVGPTGCGKTLLAQTLARILDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFI GGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFIVGGAFAGLDKII 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
++R + S++GFGA VR G L ++ DL+ +GLIPEF+GR P+L +
Sbjct: 259 AQRGKGSAMGFGADVREKNDKG-------IGELFLDLEPEDLLKFGLIPEFVGRLPVLAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+ +L EPKNAL +QY+++F + L FTDDAL IA++A+ + TGARGLR
Sbjct: 312 LQDLDEDALITILTEPKNALVKQYQRLFELEETALTFTDDALTAIARRAIERKTGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELE 484
++LE+IL E MF++P G SV V+V++EAV S P ++HG+ + E
Sbjct: 372 SILEDILLETMFDLP----GMDSVTEVVVNEEAVTSDAQP----LMIHGEADKE 417
>gi|358450533|ref|ZP_09160991.1| ATP-dependent protease ATP-binding subunit ClpX [Marinobacter
manganoxydans MnI7-9]
gi|385331925|ref|YP_005885876.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Marinobacter
adhaerens HP15]
gi|311695075|gb|ADP97948.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Marinobacter
adhaerens HP15]
gi|357225182|gb|EHJ03689.1| ATP-dependent protease ATP-binding subunit ClpX [Marinobacter
manganoxydans MnI7-9]
Length = 427
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 200/414 (48%), Positives = 268/414 (64%), Gaps = 56/414 (13%)
Query: 58 ENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYN 117
E N E + LPTP EI LDE+VIGQ+RAK + AVYN
Sbjct: 53 EEIQENAQEEPSDRLPTPAEIRNTLDEYVIGQDRAK---------------VVLSVAVYN 97
Query: 118 HYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKT 177
HYKR+ + G G+ VEL KSN+LL+GPTGSGKT
Sbjct: 98 HYKRLRY--------------------GEGKGD--------VELGKSNILLIGPTGSGKT 129
Query: 178 LLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEV 237
LLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+
Sbjct: 130 LLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAQRGIVYIDEI 189
Query: 238 DKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDIL 296
DKI K+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ++L
Sbjct: 190 DKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTGNML 247
Query: 297 FICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYG 356
FICGGAF GL+K I ER + +SIGF A V + DA T +++ V++ DLV YG
Sbjct: 248 FICGGAFAGLDKVIRERTEKNSIGFSASVASQ------DDAKNTGDVIKDVETEDLVKYG 301
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
LIPEF+GR P++ +L+ L+E+ LVQ+L EPKN+L +QY+K+F M V+L F +DALR +A
Sbjct: 302 LIPEFVGRLPVVATLNELDEEALVQILTEPKNSLTKQYQKLFDMEGVELDFREDALRAVA 361
Query: 417 KKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+KAM + TGARGLR+++E L + M++IP V V++D+ + P
Sbjct: 362 RKAMERKTGARGLRSIMEATLLDTMYQIP----SEHDVTKVVIDESVISGDSEP 411
>gi|158321198|ref|YP_001513705.1| ATP-dependent protease ATP-binding subunit ClpX [Alkaliphilus
oremlandii OhILAs]
gi|229889849|sp|A8MIS7.1|CLPX_ALKOO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|158141397|gb|ABW19709.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Alkaliphilus
oremlandii OhILAs]
Length = 426
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 198/402 (49%), Positives = 265/402 (65%), Gaps = 56/402 (13%)
Query: 70 IDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQK 129
+DLP P EI LD++VIGQE+AKK+ AVYNHYKRI
Sbjct: 58 MDLPKPSEIKDILDQYVIGQEKAKKA---------------LAVAVYNHYKRIN------ 96
Query: 130 ELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNV 189
V D VKSG+ VEL+KSN+L++GPTGSGKTLLA+TLA+I+NV
Sbjct: 97 --VED-----------VKSGD--------VELQKSNILMLGPTGSGKTLLAQTLAKIINV 135
Query: 190 PFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNN 248
PF I DAT+LT+AGYVGED E++L KL+ AAD+D+E A++GI+YIDEVDKI K+E+ +
Sbjct: 136 PFAIADATSLTEAGYVGEDVENILLKLIQAADYDIERAEKGIIYIDEVDKIARKSENPSI 195
Query: 249 GRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEK 308
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFI GGAF G++
Sbjct: 196 TRDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTTNILFIVGGAFDGIDS 253
Query: 309 TISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I +R S+GFGA + + L SLL+ + DL+ +GLIPEF+GR P++
Sbjct: 254 IIQKRTSKKSMGFGAEIESKQ-------VLDLGSLLKQIQPEDLLKFGLIPEFVGRLPVV 306
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
V+L L+E+ L+++L EPKNAL +QYK++F ++ V L ++ALRLIAKKA+ + TGARG
Sbjct: 307 VTLEQLDEEALIKILTEPKNALTKQYKRLFEIDGVHLEIEEEALRLIAKKAIERKTGARG 366
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR ++E I+ + M+EIP + V++ EA+ P
Sbjct: 367 LRGIVEGIMMDTMYEIP----SRDDIEKVIITAEAITENKEP 404
>gi|429333162|ref|ZP_19213867.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
CSV86]
gi|428762168|gb|EKX84377.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
CSV86]
Length = 427
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 200/400 (50%), Positives = 259/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISAILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ + DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKGDE-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R IGFGA VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QQRSTRGGIGFGAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +A+KA+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYGKLFEMEGVDLEFRSDALKSVARKALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE IL + M+EIP K V+ V++D+ + P
Sbjct: 375 SILEGILLDTMYEIPSQK----DVSKVVIDESVIDGTSQP 410
>gi|296134053|ref|YP_003641300.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Thermincola
potens JR]
gi|296032631|gb|ADG83399.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermincola
potens JR]
Length = 419
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 191/376 (50%), Positives = 260/376 (69%), Gaps = 53/376 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LP P+EI + LD++VIGQE AKK+ AVYNHYKRI
Sbjct: 60 ELPKPREIKEILDQYVIGQEPAKKA---------------LAVAVYNHYKRIN------- 97
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+G+ + VEL+KSN++++GPTGSGKTLLA+TLAR++NVP
Sbjct: 98 -----------MGNKIDD----------VELQKSNIVMLGPTGSGKTLLAQTLARLLNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A++GIVYIDE+DKI K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I +DT +ILFICGGAF G+EK
Sbjct: 197 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQLDTTNILFICGGAFDGIEKI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R ++GFGA +++ +L+ + DL+ +GLIPEF+GR P++V
Sbjct: 255 IQNRIGKKTLGFGAEIKSQKEKN-------VGDILKHILPEDLLKFGLIPEFVGRLPVIV 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+E+ LV++L EP+NAL +QY+K+F ++N+ L FTDDALR IA++AM +NTGARGL
Sbjct: 308 TLEALDENALVRILTEPRNALIKQYQKLFELDNIALEFTDDALRTIAQEAMKRNTGARGL 367
Query: 430 RALLENILTEAMFEIP 445
RA++E+I+ E M++IP
Sbjct: 368 RAIIEDIMLEVMYDIP 383
>gi|297616503|ref|YP_003701662.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Syntrophothermus lipocalidus DSM 12680]
gi|297144340|gb|ADI01097.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Syntrophothermus lipocalidus DSM 12680]
Length = 417
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 266/401 (66%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P P+EI LD++VIGQE+AKK IL AVYNHYKRI
Sbjct: 61 DIPKPQEIKDILDQYVIGQEKAKK-----IL----------AVAVYNHYKRI-------- 97
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N + D+ VEL+KSN+L++GPTGSGKTLLA+TLA+I+NVP
Sbjct: 98 -------------------NLGTKLDD-VELQKSNILMLGPTGSGKTLLAQTLAKILNVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E A++GIVYIDE+DKI K ++ +
Sbjct: 138 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAEKGIVYIDEIDKIARKTDNPSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ +VP P G RKHP + I IDT +ILFICGGAF G++K
Sbjct: 198 RDVSGEGVQQALLKILEGTIASVP-PQGG-RKHPHQEFIQIDTSNILFICGGAFEGIDKI 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R S+GFGA ++ +LE + DL+ +GLIPEF+GR PI+V
Sbjct: 256 IQNRVGQKSMGFGADIKTKKEKK-------IGEILEQILPQDLLKFGLIPEFVGRVPIIV 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+E LV++L EPKNAL RQY+K+F M+ V L FTDDAL+ IA++AM ++TGARGL
Sbjct: 309 TLDALDESALVRILTEPKNALVRQYQKLFDMDGVNLEFTDDALKAIAEEAMRRSTGARGL 368
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA++E+++ + M+EIP + V +V K+ + + P
Sbjct: 369 RAIVEDVMLDVMYEIP----SRADVTKCVVTKDVIQKKEKP 405
>gi|302382858|ref|YP_003818681.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brevundimonas
subvibrioides ATCC 15264]
gi|302193486|gb|ADL01058.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
subvibrioides ATCC 15264]
Length = 420
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 198/375 (52%), Positives = 254/375 (67%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEI + LD++VIGQ AKK AV+NHYKR+ H++
Sbjct: 63 VPTPKEIREVLDDYVIGQSHAKKV---------------LSVAVHNHYKRLNHATKN--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN++L+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNIMLIGPTGSGKTLLAQTLARIIDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFI GGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTANILFIVGGAFAGLEKVI 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+ R +SIGFGA V+ D T +L+ V+ DL+ +GLIPEFIGR P+L +
Sbjct: 258 AARGAGASIGFGAKVKE-------VDERRTGDILKGVEPDDLMRFGLIPEFIGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E LV +L EPKNAL +QYK++F M NV L FTDDAL +AKKA+ + TGARGLR
Sbjct: 311 LEDLDEKALVTILTEPKNALVKQYKRLFEMENVGLTFTDDALNAVAKKAITRKTGARGLR 370
Query: 431 ALLENILTEAMFEIP 445
++LE IL E MFE+P
Sbjct: 371 SILEGILLETMFELP 385
>gi|254418572|ref|ZP_05032296.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
sp. BAL3]
gi|196184749|gb|EDX79725.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
sp. BAL3]
Length = 422
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 199/375 (53%), Positives = 254/375 (67%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEI LD++VIGQ AKK AV+NHYKR+ H++
Sbjct: 63 VPTPKEIRDVLDDYVIGQSHAKKV---------------LSVAVHNHYKRLNHATKN--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN++L+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNIMLIGPTGSGKTLLAQTLARIIDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFI GGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTANILFIVGGAFAGLEKVI 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R +SIGFGA V+ D T +L+ V+ DL+ +GLIPEFIGR P+L +
Sbjct: 258 SARGAGASIGFGAQVKE-------IDERRTGDILKGVEPDDLMRFGLIPEFIGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E LV +L EPKNAL +QYK++F M NV+L FTDDAL +AKKA+ + TGARGLR
Sbjct: 311 LEDLDETALVTILTEPKNALVKQYKRLFEMENVELTFTDDALIAVAKKAITRKTGARGLR 370
Query: 431 ALLENILTEAMFEIP 445
++LE IL E MFE+P
Sbjct: 371 SILEGILLETMFELP 385
>gi|120599413|ref|YP_963987.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella sp.
W3-18-1]
gi|146292591|ref|YP_001183015.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella
putrefaciens CN-32]
gi|166215204|sp|A4Y5I3.1|CLPX_SHEPC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166215206|sp|A1RL88.1|CLPX_SHESW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|120559506|gb|ABM25433.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
sp. W3-18-1]
gi|145564281|gb|ABP75216.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
putrefaciens CN-32]
Length = 426
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 205/401 (51%), Positives = 259/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP E+ LD++VIGQ+RAKK AVYNHYKR+ +SS
Sbjct: 65 LPTPHELRAHLDDYVIGQDRAKKV---------------LSVAVYNHYKRLKNSS----- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF
Sbjct: 105 --------------PKDG---------VELGKSNILLIGPTGSGKTLLAETLARSLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLEKVI 259
Query: 311 SERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R S IGFGA V+ G D S L V+ GDLV YGLIPEFIGR P++
Sbjct: 260 EQRAHVGSGIGFGAQVK------GEKDKATISETLSQVEPGDLVKYGLIPEFIGRLPVVA 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ LVQ+L +PKNAL +QY +F M V+L F +DAL+ IA KAM++ TGARGL
Sbjct: 314 TLTELDEEALVQILSQPKNALTKQYSALFEMEGVELEFREDALKAIAHKAMSRKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E+IL + M++IP V +VD+ V AP
Sbjct: 374 RSIVESILLDTMYDIP----SVDGVVKAVVDESVVNGESAP 410
>gi|406706128|ref|YP_006756481.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [alpha
proteobacterium HIMB5]
gi|406651904|gb|AFS47304.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [alpha
proteobacterium HIMB5]
Length = 422
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 201/412 (48%), Positives = 269/412 (65%), Gaps = 60/412 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEIC LD++VIGQ AKK AV+NHYKR+ + S
Sbjct: 59 LPSPKEICTVLDDYVIGQAHAKKV---------------LSVAVHNHYKRLNYES----- 98
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ + VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 99 ----------------------KTSKNVELSKSNILLVGPTGCGKTLLAQTLARILDVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+E+ + R
Sbjct: 137 TMADATTLTEAGYVGEDVENIILKLLQAADYNVEKAQRGIVYIDEVDKISRKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 197 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S+R + +SIGFGA V+ T T +++++ DL+ YGLIPEFIGR P++ +
Sbjct: 255 SQRDKGTSIGFGADVKN-------TQDKKTGEWMKTLEPEDLLKYGLIPEFIGRLPMIAT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+++L EPKN+L +QY+++F ++ KL F D+AL+ IA KA+ K TGARGLR
Sbjct: 308 LEDLDEKSLIKILQEPKNSLTKQYQELFKLDGAKLIFKDNALKEIALKAIRKKTGARGLR 367
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGE 482
++LENIL + M+++P +V V+VD A P I+H GE
Sbjct: 368 SILENILLKTMYDLP----SMDNVEEVIVDSGAAKGQSQP----IIVHSKGE 411
>gi|399910854|ref|ZP_10779168.1| ATP-dependent protease ATP-binding subunit ClpX [Halomonas sp.
KM-1]
Length = 425
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 262/400 (65%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P+EI + LDE+VIGQ+RAK AVYNHYKR
Sbjct: 65 LPVPREIRRTLDEYVIGQDRAKTV---------------LSVAVYNHYKR---------- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
L +G+K + VEL KSN+LL+GPTGSGKTLLA+T+AR++NVPF
Sbjct: 100 ----------LRAGIKGDD--------VELGKSNILLIGPTGSGKTLLAETMARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT +ILFI GGAF GL+K I
Sbjct: 202 DVSGEGVQQALLKLIEGTTASVP-PQGG-RKHPQQEFLQVDTGNILFIVGGAFAGLDKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + IGF A V++ T G+ D LL V+ DLV +GLIPEF+GR P++ +
Sbjct: 260 RDRAEKGGIGFSAVVKSKDETKGVGD------LLADVEPEDLVKFGLIPEFVGRLPVIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ LNED L+Q+L EPKN+L +QY ++F M V+L F +DALR +A KAMA+ TGARGLR
Sbjct: 314 LTELNEDALIQILTEPKNSLVKQYARLFDMEGVELEFREDALRAVAAKAMARKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE++L + M+EIP + V V++D + P
Sbjct: 374 SILESVLLDTMYEIPSME----GVTKVVIDASVIAGDSEP 409
>gi|427407871|ref|ZP_18898073.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sphingobium
yanoikuyae ATCC 51230]
gi|425713834|gb|EKU76846.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sphingobium
yanoikuyae ATCC 51230]
Length = 422
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 206/416 (49%), Positives = 267/416 (64%), Gaps = 60/416 (14%)
Query: 56 ETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAV 115
ET+ G + G +PTP+EIC LD++VIGQ+RAK+ AV
Sbjct: 51 ETKGGLVGKKDGG---VPTPQEICDVLDDYVIGQKRAKRV---------------LSVAV 92
Query: 116 YNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSG 175
+NHYKR+ H G K G VEL KSN+LL+GPTG G
Sbjct: 93 HNHYKRLNH--------------------GSKPGE--------VELAKSNILLVGPTGCG 124
Query: 176 KTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYID 235
KTLLA+TLA+ +VPFT+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYID
Sbjct: 125 KTLLAQTLAKTFDVPFTMADATTLTEAGYVGEDVENIILKLLQASDYNVEKAQRGIVYID 184
Query: 236 EVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKD 294
E+DKI KAE+ + RDVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT +
Sbjct: 185 EIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVP-PQGG-RKHPQQEFLQVDTTN 242
Query: 295 ILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVA 354
ILFICGGAF GLEK I +R + SIGFGA V A + T LL + DL+
Sbjct: 243 ILFICGGAFAGLEKIIGDRLEAKSIGFGAHVAA-------PEERKTGELLRQSEPEDLLK 295
Query: 355 YGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRL 414
+GLIPEF+GR P++ +L L+ LV++L+EPKNAL +QY K+F M NV+L FTDDAL
Sbjct: 296 FGLIPEFVGRLPVIATLEDLDVTALVKILVEPKNALVKQYGKLFDMENVELSFTDDALTA 355
Query: 415 IAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
IAKKA+ + TGARGLR++LE IL + MF++P + V V+VDK+ V P
Sbjct: 356 IAKKAIERKTGARGLRSILEAILLDTMFDLPSME----GVGEVVVDKDVVAGTKEP 407
>gi|148548676|ref|YP_001268778.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
F1]
gi|386012907|ref|YP_005931184.1| protein ClpX [Pseudomonas putida BIRD-1]
gi|395444304|ref|YP_006384557.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
ND6]
gi|397698113|ref|YP_006535996.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
putida DOT-T1E]
gi|421521991|ref|ZP_15968640.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
LS46]
gi|166214807|sp|A5W634.1|CLPX_PSEP1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|148512734|gb|ABQ79594.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
putida F1]
gi|313499613|gb|ADR60979.1| ClpX [Pseudomonas putida BIRD-1]
gi|388558301|gb|AFK67442.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
ND6]
gi|397334843|gb|AFO51202.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
putida DOT-T1E]
gi|402754252|gb|EJX14737.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
LS46]
Length = 427
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 199/400 (49%), Positives = 259/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ + DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKGDE-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGFGA VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTKGGIGFGAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M +V L F DAL+ +A+KA+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYAKLFEMESVDLEFRSDALKAVARKALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP K V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIPSKK----DVSKVVIDESVIEGTSQP 410
>gi|393725065|ref|ZP_10344992.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas sp.
PAMC 26605]
Length = 422
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 202/396 (51%), Positives = 264/396 (66%), Gaps = 61/396 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EIC LD++VIGQ+RAK+ AV+NHYKR+ H
Sbjct: 64 VPTPQEICDVLDDYVIGQKRAKRV---------------LSVAVHNHYKRLNH------- 101
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G K + VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 102 -------------GQKGAD--------VELAKSNILLVGPTGCGKTLLAQTLARILDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI KAE+ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKAENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 201 DVSGEGVQQALLKLMEGTTASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGLEKII 258
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
+R Q SIGFGA V + RTG L++V+ DL+ +GLIPEF+GR P++
Sbjct: 259 GDRLQGKSIGFGAYVASPEERRTG---------ETLKAVEPEDLLKFGLIPEFVGRLPVI 309
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+ LV +L EPKNAL +QY+K+F M VKL FTD+AL +AKKA+ + TGARG
Sbjct: 310 ATLEDLDVPALVTILTEPKNALVKQYQKLFDMEAVKLGFTDEALVSVAKKAIDRKTGARG 369
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
LR++LE IL + MF++P G SV V++DK+ +
Sbjct: 370 LRSILEGILLDTMFDLP----GMDSVEEVMIDKDVI 401
>gi|167032911|ref|YP_001668142.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
GB-1]
gi|189044143|sp|B0KJG7.1|CLPX_PSEPG RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166859399|gb|ABY97806.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
putida GB-1]
Length = 427
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 199/400 (49%), Positives = 259/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ + DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKGDE-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGFGA VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTKGGIGFGAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M +V L F DAL+ +A+KA+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYAKLFEMESVDLEFRSDALKAVARKALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP K V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIPSKK----EVSKVVIDESVIEGTSQP 410
>gi|75676089|ref|YP_318510.1| ATP-dependent protease ATP-binding subunit ClpX [Nitrobacter
winogradskyi Nb-255]
gi|123773227|sp|Q3SRD3.1|CLPX_NITWN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|74420959|gb|ABA05158.1| ClpX, ATPase regulatory subunit [Nitrobacter winogradskyi Nb-255]
Length = 424
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 200/402 (49%), Positives = 265/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQGHAKKV---------------LSVAVHNHYKRLNHQTKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGLEKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 258 SARGRTTSIGFAAQVLAPEDRRTG---------EIFRHVEPEDLLKYGLIPEFVGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E L ++L +PKNAL +QY+++F M N++L F D+AL +A+KA+ + TGARG
Sbjct: 309 ATLEDLDEASLKKILTDPKNALVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE+IL E MF++P G V V++ +E V P
Sbjct: 369 LRSILESILLETMFDLP----GLEGVEEVVISREVVEGTARP 406
>gi|325274290|ref|ZP_08140401.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
TJI-51]
gi|324100573|gb|EGB98308.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
TJI-51]
Length = 427
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 199/400 (49%), Positives = 259/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ + DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKGDE-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGFGA VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTKGGIGFGAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E LVQ+L EPKNAL +QY K+F M +V L F DAL+ +A++A+ + TGARGLR
Sbjct: 315 LDELDEAALVQILTEPKNALTKQYAKLFEMESVDLEFRSDALKAVARRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP K V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIPSQK----DVSKVVIDESVIDGTSQP 410
>gi|386313268|ref|YP_006009433.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
putrefaciens 200]
gi|319425893|gb|ADV53967.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
putrefaciens 200]
Length = 426
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 205/401 (51%), Positives = 259/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP E+ LD++VIGQ+RAKK AVYNHYKR+ +SS
Sbjct: 65 LPTPHELRAHLDDYVIGQDRAKKV---------------LSVAVYNHYKRLKNSS----- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF
Sbjct: 105 --------------PKDG---------VELGKSNILLIGPTGSGKTLLAETLARSLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLEKVI 259
Query: 311 SERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R S IGFGA V+ G D S L V+ GDLV YGLIPEFIGR P++
Sbjct: 260 EQRAHVGSGIGFGAQVK------GEKDKATISETLSQVEPGDLVKYGLIPEFIGRLPVVA 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ LVQ+L +PKNAL +QY +F M V+L F +DAL+ IA KAM++ TGARGL
Sbjct: 314 TLTELDEEALVQILSQPKNALTKQYSALFEMEGVELEFREDALKAIAHKAMSRKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E+IL + M++IP V +VD+ V AP
Sbjct: 374 RSIVESILLDTMYDIP----SVDGVVKAVVDESVVNGESAP 410
>gi|85716434|ref|ZP_01047406.1| ATP-dependent protease ATP-binding subunit [Nitrobacter sp.
Nb-311A]
gi|85696791|gb|EAQ34677.1| ATP-dependent protease ATP-binding subunit [Nitrobacter sp.
Nb-311A]
Length = 400
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 200/402 (49%), Positives = 265/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ H +
Sbjct: 39 IPTPKEICKVLDDYVIGQGHAKKV---------------LSVAVHNHYKRLNHQTKH--- 80
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 81 -----------------------ND--VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 115
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 116 TMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEIDKISRKSDNPSITR 175
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 176 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGLEKII 233
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGF A V A + RTG + V+ DL+ YGLIPEF+GR P++
Sbjct: 234 SARGRTTSIGFAAQVLAPEDRRTG---------EIFRHVEPEDLLKYGLIPEFVGRLPVV 284
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E L ++L +PKNAL +QY+++F M N++L F D+AL +A+KA+ + TGARG
Sbjct: 285 ATLEDLDEASLKKILTDPKNALVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARG 344
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE+IL E MF++P G V V++ +E V P
Sbjct: 345 LRSILESILLETMFDLP----GLEGVEEVVISREVVEGTARP 382
>gi|332141944|ref|YP_004427682.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'Deep ecotype']
gi|410862349|ref|YP_006977583.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii AltDE1]
gi|327551966|gb|AEA98684.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'Deep ecotype']
gi|410819611|gb|AFV86228.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii AltDE1]
Length = 424
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 200/401 (49%), Positives = 263/401 (65%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQE AKK AVYNHYKR+
Sbjct: 65 LPKPTEIHAHLDDYVIGQEHAKKV---------------LSVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ + E VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 ---------------RNGDVH----EGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 259
Query: 311 SERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R Q D+ IGFGA V++ + + S L + V+ DLV YGLIPEFIGR P++
Sbjct: 260 EQRAQKDTGIGFGATVKSKDNSKQI------SELFKQVEPEDLVKYGLIPEFIGRLPVVT 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SL LNED L+Q+L EPKNA+ +QY +FSM +V+L F DDAL IAKKAM + TGARGL
Sbjct: 314 SLEELNEDALIQILREPKNAITKQYGALFSMEDVELEFRDDALNAIAKKAMERKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E +L + M+++P V+ V++D+ + P
Sbjct: 374 RSIVEAVLLDTMYDLP----SMDDVSKVVIDETVIRGESKP 410
>gi|417001833|ref|ZP_11941338.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Anaerococcus
prevotii ACS-065-V-Col13]
gi|325479719|gb|EGC82809.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Anaerococcus
prevotii ACS-065-V-Col13]
Length = 402
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 201/401 (50%), Positives = 259/401 (64%), Gaps = 61/401 (15%)
Query: 66 SEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHS 125
S G+IDL TPKEI LD +VIGQ+ AKK+ AVYNHYKRI
Sbjct: 52 SYGDIDLSTPKEIKDFLDSYVIGQDDAKKT---------------LSVAVYNHYKRI--- 93
Query: 126 SLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLAR 185
N N E D +EL+KSN+L++GPTGSGKTLLA+TLAR
Sbjct: 94 ------------------------NSN-EEDSDIELQKSNILMLGPTGSGKTLLAQTLAR 128
Query: 186 IVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAE 244
+NVPF I DAT+LT+AGYVGED E+++ KL+ AAD+D+E A+RGI+Y+DE+DKI K+E
Sbjct: 129 KLNVPFAIADATSLTEAGYVGEDVENIILKLVQAADYDIEVAERGIIYVDEIDKITRKSE 188
Query: 245 SRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFV 304
+ + RDVSGEGVQQALLK++EGT NVP P G RKHP + I +DT +ILFI GGAF
Sbjct: 189 NPSITRDVSGEGVQQALLKLIEGTEANVP-PQGG-RKHPSQEYIQVDTTNILFILGGAFD 246
Query: 305 GLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGR 364
G+E I R + +IGFGA V + L+ V + DL+ +GLIPEFIGR
Sbjct: 247 GIEDIIGRRLSEKTIGFGANVNKQEKAS-----------LKEVSTEDLLKFGLIPEFIGR 295
Query: 365 FPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNT 424
PI+VSL AL+ D LV++L EPKN+ RQY+K+F ++ VKL F DDAL IAKK+ + T
Sbjct: 296 VPIIVSLDALDVDSLVKILKEPKNSFVRQYQKLFELDGVKLTFEDDALYEIAKKSYDQKT 355
Query: 425 GARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVG 465
GARGLR ++EN+L + MFEIP + V+V KE++
Sbjct: 356 GARGLRTIMENLLLDLMFEIP----SIDDLEEVIVTKESIA 392
>gi|148977889|ref|ZP_01814442.1| ATP-dependent protease ATP-binding subunit [Vibrionales bacterium
SWAT-3]
gi|145962835|gb|EDK28107.1| ATP-dependent protease ATP-binding subunit [Vibrionales bacterium
SWAT-3]
Length = 426
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 263/401 (65%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP+EI + LD++VIGQE AKK AVYNHYKR+
Sbjct: 65 LPTPREIREHLDDYVIGQEYAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 ---------------RNGDTTAEG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLVEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SERRQDSS-IGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + S IGFGA VR+ T + + L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVETGSGIGFGAEVRSKDETKTIGE------LFTQVEPEDLVKYGLIPEFIGRLPVTT 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY +F + + +L F +DALR IAKKAM++ TGARGL
Sbjct: 315 TLTELDEEALIQILCEPKNALTKQYAALFELEDTELEFREDALRAIAKKAMSRKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P ++ V+ V++D+ + P
Sbjct: 375 RSILEGVLLETMYELP----SSTDVSKVVIDESVINGESEP 411
>gi|342214311|ref|ZP_08707012.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Veillonella
sp. oral taxon 780 str. F0422]
gi|341594542|gb|EGS37231.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Veillonella
sp. oral taxon 780 str. F0422]
Length = 407
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 265/401 (66%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+PTPKEI LD++VIGQ+ AK + AVYNHYKR+ H
Sbjct: 59 DIPTPKEIKAHLDQYVIGQDDAK---------------VSLAVAVYNHYKRLQHD----- 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
NV +D VEL+KSNVL +GPTGSGKTLLA+TLA+++ VP
Sbjct: 99 ---------------------NVIDD--VELQKSNVLFIGPTGSGKTLLAQTLAKMLQVP 135
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT+LT+AGYVGED E++L KL+ AAD D+E A+RGI+YIDE+DKI K+E+ +
Sbjct: 136 FAMADATSLTEAGYVGEDVENILLKLIQAADHDIELAERGIIYIDEIDKIARKSENPSIT 195
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + + +DT +ILFICGGAF G+EK
Sbjct: 196 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPNQEMLHLDTTNILFICGGAFDGMEKV 253
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I++R ++GFGA ++ +S+L+ V DL +GLIPEFIGR P++V
Sbjct: 254 ITKRTAKKTLGFGADIQKKEEQD-------VASILKEVVPEDLQKFGLIPEFIGRLPVMV 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+LS L+E+ L+++L EPKNAL +QY+KM S+++VKL F DALR IAK+A+ +NTGARGL
Sbjct: 307 TLSPLDEEALIKILTEPKNALTKQYEKMLSLDDVKLVFESDALREIAKEALERNTGARGL 366
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA++E ++ M+E+P K V +V +AV + P
Sbjct: 367 RAIIEKVMKRVMYEVPSMK----DVKECIVTDKAVRGEEEP 403
>gi|365838986|ref|ZP_09380239.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Anaeroglobus
geminatus F0357]
gi|364566007|gb|EHM43713.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Anaeroglobus
geminatus F0357]
Length = 415
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 262/400 (65%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP+EI + LD++VIGQE AKK+ AVYNHYKR+ +S
Sbjct: 62 LPTPREIKQNLDDYVIGQETAKKT---------------LSVAVYNHYKRLQSNS----- 101
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ SG+ VEL+KSN++++GPTGSGKTLLA+TLAR ++VPF
Sbjct: 102 -------------SMNSGD--------VELQKSNIVMVGPTGSGKTLLAQTLARFLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT+LT+AGYVGED E+ L KL+ AADFD+ A+RGI+YIDE+DKI K+E+ + R
Sbjct: 141 AIADATSLTEAGYVGEDVENCLLKLIQAADFDIARAERGIIYIDEIDKIARKSENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGT NVP P G RKHP + + IDT +ILFICGGAF G+EKTI
Sbjct: 201 DVSGEGVQQALLKILEGTEANVP-PQGG-RKHPHQEMLQIDTTNILFICGGAFDGIEKTI 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
RR + ++GFGA + LL+ + DL +GLIPE IGR P+LV+
Sbjct: 259 RSRRTEKNMGFGADIHKKNEES-------VEELLKEIIPTDLQKFGLIPELIGRLPVLVT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L+E+ +V +L EPKNAL +QY+KM M+ VKL FTDDAL+ IA++A+ + TGARGLR
Sbjct: 312 LNPLDEEAMVHILTEPKNALVKQYQKMLDMDEVKLTFTDDALKAIAEEALRRKTGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+++E I+ + MF+ P K V +V KE++ AP
Sbjct: 372 SIIERIMLDVMFDAPSRK----DVEECIVTKESIIDGKAP 407
>gi|407781585|ref|ZP_11128803.1| ATP-dependent protease ATP-binding subunit ClpX [Oceanibaculum
indicum P24]
gi|407207802|gb|EKE77733.1| ATP-dependent protease ATP-binding subunit ClpX [Oceanibaculum
indicum P24]
Length = 422
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 199/400 (49%), Positives = 266/400 (66%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP EI LD++VIGQ AK+ AV+NHYKR+ H
Sbjct: 63 IPTPTEIRTVLDDYVIGQAHAKRV---------------LSVAVHNHYKRLAH------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G K+G+ VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 101 -------------GAKNGD--------VELAKSNILLVGPTGCGKTLLAQTLARIIDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGLEKII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + +SIGFGA V+ D T +L V+ DL+ +GLIPEFIGR P+L +
Sbjct: 258 GQRNKGTSIGFGADVQG-------PDERRTGDVLREVEPEDLLKFGLIPEFIGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ LV +L PKNAL +QY+++F M +V L F +DALR IA+KA+ + TGARGLR
Sbjct: 311 LEDLDENALVDILTSPKNALVKQYQRLFEMEDVHLTFAEDALRAIAQKAIQRKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+++E IL + MF++P G ++ +++++E V S AP
Sbjct: 371 SIMEGILLDPMFDLP----GMEDIDEIVINREVVESKVAP 406
>gi|209964555|ref|YP_002297470.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodospirillum
centenum SW]
gi|238066659|sp|B6ISY6.1|CLPX_RHOCS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|209958021|gb|ACI98657.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodospirillum centenum SW]
Length = 421
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 198/394 (50%), Positives = 268/394 (68%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P+P++IC LD++VIGQE AK+ AV+NHYKR+ H
Sbjct: 63 VPSPRDICAVLDDYVIGQEHAKRV---------------LSVAVHNHYKRLAH------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G K ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 101 -------------GAK------HND--VELAKSNILLIGPTGSGKTLLAQTLARIIDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLE+ I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+ R + +SIGFGA VRA D T +L V+ DL+ +GLIPEF+GR P++ +
Sbjct: 258 AARGKGTSIGFGADVRA-------PDERRTGDILREVEPEDLLKFGLIPEFVGRLPVVAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+++L +PKNAL +QY+++F M +VKL ++ALR IA KA+ + TGARGLR
Sbjct: 311 LHDLDENALIEILTKPKNALVKQYQRLFEMEDVKLGIHEEALRSIAVKAIQRKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E+IL E MF++P G V ++++KE V
Sbjct: 371 SIMESILLEPMFDLP----GLQGVEEIVINKEVV 400
>gi|187931472|ref|YP_001891456.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. mediasiatica FSC147]
gi|187712381|gb|ACD30678.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Francisella
tularensis subsp. mediasiatica FSC147]
Length = 417
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 195/378 (51%), Positives = 245/378 (64%), Gaps = 51/378 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI K LD+++IGQ+ AKK AVYNHYKRI
Sbjct: 56 LPKPVEIKKYLDDYIIGQDNAKKV---------------LSVAVYNHYKRI--------- 91
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N+ D+ EL+KSNVLL+GPTGSGKTL A+TLA+++NVPF
Sbjct: 92 ------------------TSNLTKDDDTELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPF 133
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVG+D E+++ +LL ADFDV AQ+GI+YIDE+DKI K+ES + R
Sbjct: 134 AIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKSESTSITR 193
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP D I +DT DILFICGGAF G+EK I
Sbjct: 194 DVSGEGVQQALLKLIEGTVSSVP-PKGG-RKHPNQDMIQVDTSDILFICGGAFAGIEKVI 251
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R SIGF A V ++L + L++ ++S DL +GLIPE IGR PI+
Sbjct: 252 KHRMDKVSIGFNADVTQQ------KNSLDSDKLMQKIESEDLTRFGLIPELIGRLPIVTV 305
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L E+ LV++L EPKNAL +QY K+F +NV + FTD AL IAKKA+ K TGARGLR
Sbjct: 306 LNELKEEDLVRILTEPKNALIKQYIKLFKFDNVNIEFTDQALVEIAKKAITKKTGARGLR 365
Query: 431 ALLENILTEAMFEIPETK 448
+LEN+L E MF IP ++
Sbjct: 366 TILENVLLEVMFHIPSSE 383
>gi|16126204|ref|NP_420768.1| ATP-dependent protease ATP-binding subunit [Caulobacter crescentus
CB15]
gi|221234976|ref|YP_002517412.1| ATP-dependent protease ATP-binding subunit ClpX [Caulobacter
crescentus NA1000]
gi|239977101|sp|B8GX14.1|CLPX_CAUCN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|239977102|sp|P0CAU2.1|CLPX_CAUCR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|3688207|emb|CAA09092.1| clpX protein [Caulobacter crescentus CB15]
gi|13423422|gb|AAK23936.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Caulobacter
crescentus CB15]
gi|220964148|gb|ACL95504.1| ATP-dependent endopeptidase clp, ATP-binding subunit ClpX
[Caulobacter crescentus NA1000]
Length = 420
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 198/377 (52%), Positives = 255/377 (67%), Gaps = 57/377 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EIC+ LD++VIGQ AKK AV+NHYKR+ H+S
Sbjct: 63 VPTPREICEVLDDYVIGQGHAKKV---------------LAVAVHNHYKRLNHASKN--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTG+GKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLVGPTGTGKTLLAQTLARIIDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIVLKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 257
Query: 311 SERRQDSSIGFGAPVR--ANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R SIGFGA V RTG +L +V+ DL +GLIPEFIGR P++
Sbjct: 258 SARGAAKSIGFGAKVTDPEERRTG---------EILRNVEPDDLQRFGLIPEFIGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E LV++L EPKNA +QY+++F M N+ L FT+DAL +AKKA+A+ TGARG
Sbjct: 309 ATLEDLDEAALVKILTEPKNAFVKQYQRLFEMENIGLTFTEDALHQVAKKAIARKTGARG 368
Query: 429 LRALLENILTEAMFEIP 445
LR+++E IL E MFE+P
Sbjct: 369 LRSIMEGILLETMFELP 385
>gi|326795824|ref|YP_004313644.1| ATP-dependent Clp protease ATP-binding subunit clpX [Marinomonas
mediterranea MMB-1]
gi|326546588|gb|ADZ91808.1| ATP-dependent Clp protease ATP-binding subunit clpX [Marinomonas
mediterranea MMB-1]
Length = 427
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 196/405 (48%), Positives = 265/405 (65%), Gaps = 55/405 (13%)
Query: 67 EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSS 126
E + +LPTP ++ K LD++VIGQERAKK AVYNHYKR+ H S
Sbjct: 63 EASDELPTPLKLSKSLDDYVIGQERAKKV---------------LAVAVYNHYKRLRHQS 107
Query: 127 LQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARI 186
D VEL KSN+LL+GPTGSGKTLLA+TLAR+
Sbjct: 108 ---------------------------SKDSPVELGKSNILLIGPTGSGKTLLAQTLARV 140
Query: 187 VNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAES 245
++VPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++
Sbjct: 141 LDVPFTIADATTLTEAGYVGEDVENIIQKLLQNCDYDVEKAQRGIVYIDEIDKISRKSDN 200
Query: 246 RNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVG 305
+ RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF G
Sbjct: 201 PSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSNILFICGGAFAG 258
Query: 306 LEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRF 365
LE+ IS+R + SSIGF A V++ ++A + V++ DLV +GLIPEF+GR
Sbjct: 259 LERVISDRTEKSSIGFSATVKSKDEGRTFSEA------IHQVETEDLVKFGLIPEFVGRL 312
Query: 366 PILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTG 425
P++ +LS L+E+ L+ +L EPKNAL +QY+ +F + V+L FTD++LR A A+ + TG
Sbjct: 313 PVVATLSELDEEALMTILSEPKNALTKQYQHLFDLEGVELEFTDESLREAAHLALERKTG 372
Query: 426 ARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
ARGLR++LE+ L + M+E+P S V +++D +V P
Sbjct: 373 ARGLRSILESALLDCMYELP----NRSDVVKIVMDGASVRGESTP 413
>gi|294011931|ref|YP_003545391.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sphingobium
japonicum UT26S]
gi|390167377|ref|ZP_10219368.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingobium
indicum B90A]
gi|390167656|ref|ZP_10219637.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingobium
indicum B90A]
gi|292675261|dbj|BAI96779.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sphingobium
japonicum UT26S]
gi|389589722|gb|EIM67736.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingobium
indicum B90A]
gi|389590079|gb|EIM68084.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingobium
indicum B90A]
Length = 422
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 202/400 (50%), Positives = 260/400 (65%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EIC LD++VIGQ RAK+ AV+NHYKR+ H
Sbjct: 64 VPTPQEICDVLDDYVIGQNRAKRV---------------LSVAVHNHYKRLNH------- 101
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G K G VEL KSN+LL+GPTG GKTLLA+TLA+ +VPF
Sbjct: 102 -------------GTKPGE--------VELAKSNILLVGPTGCGKTLLAQTLAKTFDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI KAE+ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIILKLLQASDYNVEKAQRGIVYIDEIDKISRKAENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 201 DVSGEGVQQALLKLMEGTTASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + SIGFGA V A + T LL + DL+ +GLIPEF+GR P++ +
Sbjct: 259 GDRLEAKSIGFGAHVAA-------PEERKTGELLRQSEPEDLLKFGLIPEFVGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ LV++L+EPKNAL +QY K+F M NV+L FTDDAL IAKKA+ + TGARGLR
Sbjct: 312 LEDLDVAALVKILVEPKNALVKQYAKLFDMENVELSFTDDALTAIAKKAIERKTGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE IL + MF++P + V V+VDK+ V P
Sbjct: 372 SILEAILLDTMFDLPSME----GVGEVVVDKDVVAGSKEP 407
>gi|126741245|ref|ZP_01756924.1| ATP-dependent protease ATP-binding subunit [Roseobacter sp.
SK209-2-6]
gi|126717650|gb|EBA14373.1| ATP-dependent protease ATP-binding subunit [Roseobacter sp.
SK209-2-6]
Length = 422
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 198/414 (47%), Positives = 276/414 (66%), Gaps = 60/414 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P+PK+IC+ LD++VIGQ AK+ AV+NHYKR+ H+
Sbjct: 63 VPSPKDICEVLDDYVIGQAMAKRV---------------LSVAVHNHYKRLNHAQ----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G+ +EL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ---------------KAGS-------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K+E+ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL++ I
Sbjct: 201 DVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDRII 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
++R + S++GFGA VR N G + + ++ DL+ +GLIPEF+GR P+L +
Sbjct: 259 AQRGKGSAMGFGADVRDNDDRG-------VGEIFQDLEPEDLLKFGLIPEFVGRLPVLAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED LV +L PKNAL +QY+++F + +L FT +AL+ IAKKA+ + TGARGLR
Sbjct: 312 LEDLDEDALVTILTLPKNALVKQYQRLFELEETELDFTPEALKAIAKKAIERKTGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELE 484
+++E+IL + MF++P G SV V+V++EAV S P ++H D E E
Sbjct: 372 SIMEDILLDTMFDLP----GMDSVTKVVVNEEAVTSDAQP----LMIHADAEKE 417
>gi|428201397|ref|YP_007079986.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pleurocapsa
sp. PCC 7327]
gi|427978829|gb|AFY76429.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pleurocapsa
sp. PCC 7327]
Length = 447
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 207/423 (48%), Positives = 272/423 (64%), Gaps = 55/423 (13%)
Query: 48 SNGIES---ESETENGNRNRNSEG-NID-LPTPKEICKGLDEFVIGQERAKKSHIFCILV 102
SN + S SE R N + N D +P P+EI K LDE+VIGQ+ AKK I +
Sbjct: 53 SNSVSSSVPRSEENPAKRRANRDRLNFDRIPKPREIKKYLDEYVIGQDDAKK--ILSV-- 108
Query: 103 DMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELE 162
AVYNHYKR+ S +K SG+ D+ VEL+
Sbjct: 109 -----------AVYNHYKRLSVSQARK--------------SGII--------DDPVELQ 135
Query: 163 KSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADF 222
KSN+LL+GPTGSGKTLLA+TLA+I++VPF + DAT LT+AGYVGED E++L +LL AD
Sbjct: 136 KSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLLQVADL 195
Query: 223 DVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRK 281
DVE AQRGI+YIDE+DKI K+E+ + RDVSGEGVQQALLKMLEGTV NVP P G RK
Sbjct: 196 DVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVP-PQGG-RK 253
Query: 282 HPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTS 341
HP D I IDT +ILFICGGAFVGL+K + +R S+GF P G + T+
Sbjct: 254 HPYQDCIQIDTSNILFICGGAFVGLDKMVEQRLGKKSMGFVRP------GEGTSKEKRTA 307
Query: 342 SLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMN 401
LL+ ++ DLV YG+IPEF+GR P++ SL L+E+ LV +L +P+NAL +QY+K+ M+
Sbjct: 308 DLLKQLEPDDLVKYGMIPEFVGRIPVMASLDPLDEETLVAILTQPRNALVKQYQKLLKMD 367
Query: 402 NVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDK 461
NV+L F DA+R IA++A + TGAR LR ++E ++ + M+E+P K V L+ +
Sbjct: 368 NVQLEFRHDAVRAIAQEAYRRKTGARALRGIVEELMLDVMYELPSRK----DVQRCLITR 423
Query: 462 EAV 464
E V
Sbjct: 424 EMV 426
>gi|83644979|ref|YP_433414.1| ATP-dependent protease ATP-binding subunit ClpX [Hahella chejuensis
KCTC 2396]
gi|123533762|sp|Q2SK35.1|CLPX_HAHCH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|83633022|gb|ABC28989.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Hahella
chejuensis KCTC 2396]
Length = 427
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 193/407 (47%), Positives = 266/407 (65%), Gaps = 56/407 (13%)
Query: 65 NSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYH 124
S+ + LPTP EI + LD++VIGQ RAK + AVYNHYKR+ +
Sbjct: 60 TSDSSDRLPTPHEIKETLDDYVIGQTRAK---------------LALAVAVYNHYKRLRY 104
Query: 125 SSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLA 184
+ E VEL KSN+LL+GPTGSGKTLLA+TLA
Sbjct: 105 EDKKGE----------------------------VELGKSNILLIGPTGSGKTLLAETLA 136
Query: 185 RIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KA 243
R++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ+GIVYIDE+DKI K+
Sbjct: 137 RLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQKGIVYIDEIDKISRKS 196
Query: 244 ESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAF 303
++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF
Sbjct: 197 DNPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSNILFICGGAF 254
Query: 304 VGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIG 363
GLEK I +R + SIGF A V++ + + + + L+ V++ DL+ +GLIPEF+G
Sbjct: 255 AGLEKIIRDRAEKGSIGFSAVVKSQLSSKSVGET------LKDVETEDLIKFGLIPEFVG 308
Query: 364 RFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKN 423
R P++ +L L+E L+Q+L +P+NAL +QY K+F M +V++ F +DALR IAKKAM +
Sbjct: 309 RLPVIATLDELDEAALIQILTQPRNALTKQYSKLFEMESVEVDFREDALRSIAKKAMERK 368
Query: 424 TGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
TGARGLR++LE +L + M++IP + V V++D+ + P
Sbjct: 369 TGARGLRSILEQVLLKTMYDIPSEQ----DVCKVVIDEGVIAGESEP 411
>gi|403387722|ref|ZP_10929779.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium sp.
JC122]
Length = 430
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 199/396 (50%), Positives = 265/396 (66%), Gaps = 57/396 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI K LD++V+GQ+ AKKS AVYNHYKRI
Sbjct: 60 LPKPAEIKKYLDQYVVGQDEAKKS---------------LSVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
S V G+ VEL+KSN+LL+GPTGSGKTLLA+TLA+++NVPF
Sbjct: 96 -----------SSNVSEGD--------VELQKSNILLLGPTGSGKTLLAQTLAKMLNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ +D+DVE A++GI+YIDE+DKI K+E+ + R
Sbjct: 137 AIADATTLTEAGYVGEDVENILLKLIQNSDYDVEKAEKGIIYIDEIDKIARKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV +VP P G RKHP + I I+T +ILFICGGAF GL+K I
Sbjct: 197 DVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQINTSNILFICGGAFDGLDKII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R Q SS+GFG A+++T + D +LL+ + GDL+ +GLIPEF+GR PI+V+
Sbjct: 255 SRRTQKSSMGFG----ADVQTKEVKD---IGALLKEIMPGDLLRFGLIPEFVGRLPIIVT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L AL+E LV +L EPKNAL +QYKK+F M++V L F ++AL+ IA +A+ + TGARGLR
Sbjct: 308 LQALDESALVSILSEPKNALVKQYKKLFEMDDVLLDFDEEALKQIANEAIKRKTGARGLR 367
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
A++E + + MFEIP + V++ K+ + +
Sbjct: 368 AIIEETMKDIMFEIP----SREEIEKVIITKDTIKT 399
>gi|20807120|ref|NP_622291.1| ATP-dependent protease ATP-binding subunit ClpX [Thermoanaerobacter
tengcongensis MB4]
gi|254479267|ref|ZP_05092610.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Carboxydibrachium pacificum DSM 12653]
gi|23813862|sp|Q8RC24.1|CLPX_THETN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|20515614|gb|AAM23895.1| ATP-dependent protease Clp, ATPase subunit [Thermoanaerobacter
tengcongensis MB4]
gi|214034805|gb|EEB75536.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Carboxydibrachium pacificum DSM 12653]
Length = 425
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 263/401 (65%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLP PKEI LD++VIGQ+RAKK+ AVYNHYKRI
Sbjct: 59 DLPKPKEIKAFLDQYVIGQDRAKKA---------------LAVAVYNHYKRI-------- 95
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N V++D+ VEL+KSN+LL+GPTGSGKTLLA+TLA+++NVP
Sbjct: 96 -------------------NSKVKSDD-VELQKSNILLLGPTGSGKTLLAQTLAKLLNVP 135
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT LT+AGYVGED E++L +L+ AAD+D+E A++GI+YIDE+DKI K+E+ +
Sbjct: 136 FAIADATTLTEAGYVGEDVENILLRLIQAADYDIERAEKGIIYIDEIDKIARKSENPSIT 195
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ NVP P G RKHP + I IDT +ILFICGGAF G++K
Sbjct: 196 RDVSGEGVQQALLKILEGTIANVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFEGIDKI 253
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R S+GFGA V++ +L+ + DL+ +G+IPEFIGR PI+V
Sbjct: 254 IESRIGKKSLGFGAEVQSKKEKD-------VGEILKHIMPEDLLKFGMIPEFIGRVPIVV 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L +D LV++L EPKNAL +QY+K+F M+ VKL F AL LIA+ A+ + TGARGL
Sbjct: 307 TLDPLTKDDLVRILTEPKNALVKQYEKLFEMDGVKLEFEKKALDLIAEMALERGTGARGL 366
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA+LE+I+ + M+EIP ++ ++ +E V + P
Sbjct: 367 RAILEDIMLDVMYEIP----SDETIEKCIITEETVRKIAPP 403
>gi|26989025|ref|NP_744450.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
KT2440]
gi|38257486|sp|Q88KI9.1|CLPX_PSEPK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|24983848|gb|AAN67914.1|AE016423_9 ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
putida KT2440]
Length = 442
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 199/400 (49%), Positives = 259/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 80 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 118
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ + DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 119 --------------------DKKGDE-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 157
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 158 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 217
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 218 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 275
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGFGA VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 276 QNRSTKGGIGFGAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 329
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M +V L F DAL+ +A+KA+ + TGARGLR
Sbjct: 330 LDELDEAALMQILTEPKNALTKQYAKLFEMESVDLEFRSDALKAVARKALERKTGARGLR 389
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP K V+ V++D+ + P
Sbjct: 390 SILEGVLLDTMYEIPSKK----DVSKVVIDESVIEGTSQP 425
>gi|334344658|ref|YP_004553210.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sphingobium
chlorophenolicum L-1]
gi|334101280|gb|AEG48704.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sphingobium
chlorophenolicum L-1]
Length = 422
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 202/400 (50%), Positives = 260/400 (65%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EIC LD++VIGQ RAK+ AV+NHYKR+ H
Sbjct: 64 VPTPQEICDVLDDYVIGQNRAKRV---------------LSVAVHNHYKRLNH------- 101
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G K G VEL KSN+LL+GPTG GKTLLA+TLA+ +VPF
Sbjct: 102 -------------GTKPGE--------VELAKSNILLVGPTGCGKTLLAQTLAKTFDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI KAE+ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIILKLLQASDYNVEKAQRGIVYIDEIDKISRKAENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 201 DVSGEGVQQALLKLMEGTTASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + SIGFGA V A + T LL + DL+ +GLIPEF+GR P++ +
Sbjct: 259 GDRLEAKSIGFGAHVAA-------PEERKTGELLRQSEPEDLLKFGLIPEFVGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ LV++L+EPKNAL +QY K+F M NV+L FTDDAL IAKKA+ + TGARGLR
Sbjct: 312 LEDLDVTALVKILVEPKNALVKQYAKLFDMENVELSFTDDALTAIAKKAIERKTGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE IL + MF++P + V V+VDK+ V P
Sbjct: 372 SILEAILLDTMFDLPSME----GVGEVVVDKDVVAGNKEP 407
>gi|302878842|ref|YP_003847406.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Gallionella
capsiferriformans ES-2]
gi|302581631|gb|ADL55642.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Gallionella
capsiferriformans ES-2]
Length = 416
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 197/395 (49%), Positives = 257/395 (65%), Gaps = 58/395 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LP PK+IC LDE+VIGQERAK+ I + AVYNHYKR+
Sbjct: 62 ELPVPKDICATLDEYVIGQERAKR--ILSV-------------AVYNHYKRL-------- 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
CN D+ VEL KSN+LL+GPTGSGKTLLA+TLAR+++VP
Sbjct: 99 -------------------KCN--TDDGVELAKSNILLVGPTGSGKTLLAQTLARMLDVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LT+AGYVGED E+++ KLL A D++VE AQRGI+Y+DE+DKI K+++ +
Sbjct: 138 FVMADATTLTEAGYVGEDVENIIQKLLQACDYNVEKAQRGIIYVDEIDKISRKSDNPSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGT IP G RKHP + + +DT +ILFICGGAF GLEK
Sbjct: 198 RDVSGEGVQQALLKLIEGT--KASIPPQGGRKHPNTEFLQVDTTNILFICGGAFDGLEKV 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R +SIGFGA +R+ D T L V+ DLV +GLIPEF+GR P++
Sbjct: 256 IRNRSSKASIGFGATIRS-------VDERKTGETLRDVEPEDLVKFGLIPEFVGRLPVIA 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+E + Q+L EPKNAL +QYKK+F M V+L F +DAL IAKKA+A+ TGARGL
Sbjct: 309 TLEELDEAAMKQILTEPKNALTKQYKKLFEMEGVELEFREDALLAIAKKALARKTGARGL 368
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
R++LE L + MF++P +V+ V++D V
Sbjct: 369 RSILEQALLDVMFDLP----SMDNVSKVVLDDSGV 399
>gi|350425874|ref|XP_003494260.1| PREDICTED: hypothetical protein LOC100749102 [Bombus impatiens]
Length = 2402
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 208/442 (47%), Positives = 280/442 (63%), Gaps = 63/442 (14%)
Query: 57 TENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVY 116
TENG ++++ LPTP +I K LD++VIGQ+RAKK AVY
Sbjct: 669 TENGEFDKST-----LPTPHQIRKHLDQYVIGQDRAKKV---------------LAVAVY 708
Query: 117 NHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGK 176
NHYKR+Y SD K+ N VEL KSN+LL+GPTGSGK
Sbjct: 709 NHYKRLY---------SD------------KTVNG-------VELGKSNILLIGPTGSGK 740
Query: 177 TLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDE 236
TLLA+TLAR ++VPF I DAT LT+AGYVGED E+++ KLL D+DVE AQRGI+YIDE
Sbjct: 741 TLLAETLARRLDVPFAIADATTLTEAGYVGEDVENIVQKLLQNCDYDVEKAQRGIIYIDE 800
Query: 237 VDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDI 295
+DKI K+++ + RDVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT I
Sbjct: 801 IDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVP-PKGG-RKHPQQEFLQVDTSKI 858
Query: 296 LFICGGAFVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVA 354
LFICGGAF GL+K IS+R ++ IGFGA V++ + +D LL ++ DL+
Sbjct: 859 LFICGGAFAGLDKVISQRVATNTGIGFGAEVKSEKQNASESD------LLAQIEPEDLIK 912
Query: 355 YGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRL 414
+GLIPEFIGR P++ +LS L+E L+Q+L EPKNAL +QY+ +F++ N +L F+ +AL
Sbjct: 913 FGLIPEFIGRLPVVATLSELDEKALIQILTEPKNALTKQYQALFNLENTELEFSQEALEA 972
Query: 415 IAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGA 474
IAKKAM + TGARGLR+++ENIL + M+++P V V+V K+ V P
Sbjct: 973 IAKKAMKRKTGARGLRSIVENILLDTMYDLP----SFDDVAKVVVTKDTVDENLPPNLIK 1028
Query: 475 KI-LHGDGELERVLHETKSAHE 495
I L + E E + K + +
Sbjct: 1029 TIKLENNAETEENIMSNKHSKQ 1050
>gi|406942780|gb|EKD74935.1| hypothetical protein ACD_44C00289G0001 [uncultured bacterium]
Length = 423
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 194/407 (47%), Positives = 264/407 (64%), Gaps = 56/407 (13%)
Query: 65 NSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYH 124
N E LP P+EI K LD++VIGQ AKK IL AVYNHYKR+ H
Sbjct: 58 NQETQQRLPHPREIAKTLDDYVIGQTLAKK-----IL----------SVAVYNHYKRLQH 102
Query: 125 SSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLA 184
S + + +EL KSN+LL+GPTGSGKTLLA+TLA
Sbjct: 103 DSKKDD----------------------------IELNKSNILLIGPTGSGKTLLAETLA 134
Query: 185 RIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KA 243
RI+NVPFTI DAT LT+AGYVGED E+++ KLL D+DV+ AQ GIVYIDE+DKI K+
Sbjct: 135 RILNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVKKAQTGIVYIDEIDKISRKS 194
Query: 244 ESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAF 303
+S + RDVSGEGVQQALLK++EGT+ +V P +G RKHP+ + + +DT +ILFICGGAF
Sbjct: 195 DSPSITRDVSGEGVQQALLKLIEGTIASV--PPHGGRKHPQQEFLQVDTSNILFICGGAF 252
Query: 304 VGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIG 363
GLEK + +R + SSIGF A V + + + +L S++ DL+ YGLIPEF+G
Sbjct: 253 SGLEKIVKDRTEKSSIGFSAQVHSKHNKKQIGE------VLRSLEPEDLIKYGLIPEFVG 306
Query: 364 RFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKN 423
R P++ +L L+ + L+QVL++PKN+L +QY K+F M+ V+L F +D+++ IAKKA+
Sbjct: 307 RLPVVATLDELDLNSLIQVLIQPKNSLIKQYTKLFKMDGVELEFREDSIKTIAKKALEHK 366
Query: 424 TGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
TGARGLR+++E IL + MFE+P ++ V++D + AP
Sbjct: 367 TGARGLRSIMEQILLDIMFELP----SLEKLSKVVIDASVISGDTAP 409
>gi|399545472|ref|YP_006558780.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Marinobacter
sp. BSs20148]
gi|399160804|gb|AFP31367.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Marinobacter
sp. BSs20148]
Length = 427
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 198/416 (47%), Positives = 269/416 (64%), Gaps = 60/416 (14%)
Query: 58 ENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYN 117
E N E + LPTP EI + L+E+VIGQ+RAK + AVYN
Sbjct: 53 EEIQENAQEEASDRLPTPAEIRETLNEYVIGQDRAK---------------VVLAVAVYN 97
Query: 118 HYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKT 177
HYKR+ + + E VEL KSN+LL+GPTGSGKT
Sbjct: 98 HYKRLRYGEGKAE----------------------------VELGKSNILLIGPTGSGKT 129
Query: 178 LLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEV 237
LLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+
Sbjct: 130 LLAETLARVLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEI 189
Query: 238 DKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDIL 296
DKI K+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + ++T +IL
Sbjct: 190 DKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVNTSNIL 247
Query: 297 FICGGAFVGLEKTISERRQDSSIGFGAPV--RANMRTGGLTDALVTSSLLESVDSGDLVA 354
FICGGAF GL+K I +R SSIGF A V + N+++ G +++ V + DLV
Sbjct: 248 FICGGAFAGLDKVIQQRSARSSIGFSAEVASKDNIKSPG--------EIIKDVQTEDLVK 299
Query: 355 YGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRL 414
+GLIPEF+GR P++ +L+ L+ED L+Q+L EPKNAL +QY+K+F M V+L F ++ALR
Sbjct: 300 FGLIPEFVGRLPVVATLTELDEDALIQILTEPKNALTKQYQKLFEMEGVELDFREEALRA 359
Query: 415 IAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+A+KA +NTGARGLR+++E L + M++IP + V V+VD+ + P
Sbjct: 360 VARKAKERNTGARGLRSIMEATLLDTMYQIPSEQ----DVCKVVVDESVISGDSEP 411
>gi|260768946|ref|ZP_05877880.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
furnissii CIP 102972]
gi|375131468|ref|YP_004993568.1| ATP-dependent protease ATP-binding subunit [Vibrio furnissii NCTC
11218]
gi|260616976|gb|EEX42161.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
furnissii CIP 102972]
gi|315180642|gb|ADT87556.1| ATP-dependent protease ATP-binding subunit [Vibrio furnissii NCTC
11218]
Length = 426
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 259/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP+EI + LD++VIGQE AKK AVYNHYKR+
Sbjct: 65 LPTPREIREHLDDYVIGQEHAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 ---------------RNGDTTSEG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLVEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR+ + L S L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVATGTGIGFGAEVRSKDESKSL------SELFTQVEPEDLVKYGLIPEFIGRLPVTA 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+++ L+Q+L EPKNAL +QY +F + NV L F +DALR IA +AM + TGARGL
Sbjct: 315 TLTELDQEALIQILCEPKNALTKQYAALFELENVNLEFREDALRAIAARAMKRKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LEN+L E M+E+P + V V++D+ + P
Sbjct: 375 RSILENVLLETMYELP----SMTEVEKVVIDESVINGESEP 411
>gi|170744619|ref|YP_001773274.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
sp. 4-46]
gi|238688059|sp|B0UD19.1|CLPX_METS4 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|168198893|gb|ACA20840.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacterium sp. 4-46]
Length = 423
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 202/410 (49%), Positives = 271/410 (66%), Gaps = 61/410 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEI + LD++VIGQ+ AKK AV+NHYKR+ H++
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKV---------------LSVAVHNHYKRLAHAAKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLE+ I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+A D T + +V+ DL+ +GLIPEF+GR P+L +
Sbjct: 258 SARGKGTSIGFGATVQA-------PDDRRTGEIFRAVEPEDLLKFGLIPEFVGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L ++L EPKNAL +QY+++F M NV L F ++AL L+A+KA+ + TGARGLR
Sbjct: 311 LEDLDETALKRILQEPKNALVKQYQRLFEMENVDLTFQEEALTLVARKAIERKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGD 480
++LE+IL E M+++P G SV V++ E V P +HGD
Sbjct: 371 SILESILLETMYDLP----GLDSVEQVVIGPEVVEGKARP----LYIHGD 412
>gi|440781232|ref|ZP_20959574.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
pasteurianum DSM 525]
gi|440220837|gb|ELP60043.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
pasteurianum DSM 525]
Length = 434
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 195/375 (52%), Positives = 256/375 (68%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQE AKKS AVYNHYKRI
Sbjct: 60 LPKPIEIKNYLDQYVIGQEEAKKS---------------LAVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N NV N++I EL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF
Sbjct: 96 ------------------NSNVSNEDI-ELQKSNILLLGPTGSGKTLLAQTLAKFLNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ AD+DVE A++GI+YIDE+DKI K+E+ + R
Sbjct: 137 AIADATTLTEAGYVGEDVENILLKLIQNADYDVERAEKGIIYIDEIDKIARKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV +VP P G RKHP + I I+T +ILFICGGAF G++K I
Sbjct: 197 DVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQINTTNILFICGGAFDGIDKII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R + SS+GFGA V++ LL+ + GDL+ +GLIPEF+GR PILV+
Sbjct: 255 EHRTRTSSMGFGADVQSKKEKD-------IGVLLKDIMPGDLLKFGLIPEFVGRLPILVT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L AL+E L+++L +PKNAL +QYKK+F M++V L F +++L IAK+A+++NTGARGLR
Sbjct: 308 LDALDEKALIEILSKPKNALVKQYKKLFQMDSVDLEFKEESLTAIAKEAISRNTGARGLR 367
Query: 431 ALLENILTEAMFEIP 445
A++E ++ + MF+IP
Sbjct: 368 AIIEEMMKDIMFDIP 382
>gi|170720928|ref|YP_001748616.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
W619]
gi|229484079|sp|B1J693.1|CLPX_PSEPW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|169758931|gb|ACA72247.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
putida W619]
Length = 427
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 259/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LSVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ + DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKGDE-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGFGA VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTKGGIGFGAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY ++F M +V L F DAL+ +A+KA+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYARLFEMESVDLEFRSDALKAVARKALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP K V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIPSQK----EVSKVVIDESVIEGTSQP 410
>gi|257065889|ref|YP_003152145.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Anaerococcus
prevotii DSM 20548]
gi|256797769|gb|ACV28424.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Anaerococcus
prevotii DSM 20548]
Length = 404
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 200/398 (50%), Positives = 261/398 (65%), Gaps = 61/398 (15%)
Query: 68 GNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSL 127
+IDL TPKEI + LD +VIGQ+ AKK+ AVYNHYKRI
Sbjct: 56 ADIDLSTPKEIKEFLDSYVIGQDDAKKT---------------LSVAVYNHYKRI----- 95
Query: 128 QKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIV 187
N N E D +EL+KSN+L++GPTGSGKTLLA+TLAR +
Sbjct: 96 ----------------------NSN-EEDSDIELQKSNILMLGPTGSGKTLLAQTLARKL 132
Query: 188 NVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESR 246
NVPF I DAT+LT+AGYVGED E+++ KL+ AAD+D++ A+RGI+Y+DE+DKI K+E+
Sbjct: 133 NVPFAIADATSLTEAGYVGEDVENIILKLVQAADYDIDIAERGIIYVDEIDKITRKSENP 192
Query: 247 NNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGL 306
+ RDVSGEGVQQALLK++EGT NVP P G RKHP + I +DT +ILFI GGAF G+
Sbjct: 193 SITRDVSGEGVQQALLKLIEGTEANVP-PQGG-RKHPSQEYIQVDTTNILFILGGAFDGI 250
Query: 307 EKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFP 366
E I+ R + +IGFGA V N S+ L+ V++ DL+ YGLIPEFIGR P
Sbjct: 251 EDIINRRLSEKTIGFGASVTKN-----------ASASLKEVNTEDLLKYGLIPEFIGRVP 299
Query: 367 ILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGA 426
I+VSL AL D LV++L EPKN+ RQY+K+F ++ VKL F D+AL IA+KA + TGA
Sbjct: 300 IVVSLDALEVDSLVKILKEPKNSFVRQYQKLFELDGVKLTFEDEALEKIAEKAYNQKTGA 359
Query: 427 RGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
RGLR ++EN+L + MFEIP + V+V KE++
Sbjct: 360 RGLRTIMENLLLDLMFEIP----SIDDLEEVIVTKESI 393
>gi|325922709|ref|ZP_08184449.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
gardneri ATCC 19865]
gi|325546826|gb|EGD17940.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
gardneri ATCC 19865]
Length = 428
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 203/424 (47%), Positives = 272/424 (64%), Gaps = 62/424 (14%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E R+S LP P+EI + LD++VIGQ RAK++
Sbjct: 48 NDIIREELEEKAQSARSS-----LPKPREILEVLDQYVIGQLRAKRT------------- 89
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKRI S +NDE VEL KSN+LL
Sbjct: 90 --LAVAVYNHYKRIESRS---------------------------KNDE-VELAKSNILL 119
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ
Sbjct: 120 VGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQ 179
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
+GIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ +
Sbjct: 180 QGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEF 237
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQDS-SIGFGAPVRANMRTGGLTDALVTSSLLES 346
+ +DTK+ILFICGGAF GL+K I +R D+ IGFGA V+++ R + +L
Sbjct: 238 LQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSERKQEV------GKILAE 291
Query: 347 VDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLH 406
V+ DL+ +GLIPEF+GR P++ +L L+E L+++L EPKNA+ +Q+KK+F M V+L
Sbjct: 292 VEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFDMEGVELE 351
Query: 407 FTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
F DAL IAKKA+ + TGARGLR ++E++L + M+E+P +V+ V+VD+ +
Sbjct: 352 FRPDALSAIAKKALKRKTGARGLRTIVESVLLDTMYELP----SQENVSKVVVDESVIEH 407
Query: 467 VDAP 470
P
Sbjct: 408 KSEP 411
>gi|404369990|ref|ZP_10975317.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
sp. 7_2_43FAA]
gi|226913879|gb|EEH99080.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
sp. 7_2_43FAA]
Length = 431
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 193/400 (48%), Positives = 271/400 (67%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P P EI LD++VIGQE+AKKS AVYNHYKRI
Sbjct: 60 VPKPNEIKNYLDQYVIGQEKAKKS---------------LSVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N N+ +D+I EL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF
Sbjct: 96 ------------------NSNLIDDDI-ELQKSNILLLGPTGSGKTLLAQTLAKFLNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ +AD+D+E A++GI+YIDE+DKI K+E+ + R
Sbjct: 137 AIADATTLTEAGYVGEDVENILLKLIQSADYDIERAEKGIIYIDEIDKIARKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGT +VP P G RKHP + + I+T +ILFICGGAF G++K I
Sbjct: 197 DVSGEGVQQALLKILEGTTASVP-PQGG-RKHPHQEFLQINTSNILFICGGAFDGVDKII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + SSIGFG AN+ + D LL+ + DL+ +GLIPEF+GR P++V+
Sbjct: 255 EKRTEKSSIGFG----ANITSRHTKDV---GKLLKDIMPSDLLKFGLIPEFVGRLPVVVT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L +L+ D LV +L +PKNAL +QY+K+F ++NV+L FTDDAL+ IA +A+ + TGARGLR
Sbjct: 308 LESLDNDALVNILTQPKNALVKQYRKLFEIDNVELDFTDDALKAIANEAIERKTGARGLR 367
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+++E ++TE MF+IP +++ V+++++ + ++P
Sbjct: 368 SIVEEMMTEVMFDIP----SDETISKVIINEDCIKEKNSP 403
>gi|253999169|ref|YP_003051232.1| ATP-dependent protease ATP-binding subunit ClpX [Methylovorus
glucosetrophus SIP3-4]
gi|253985848|gb|ACT50705.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylovorus
glucosetrophus SIP3-4]
Length = 423
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 196/403 (48%), Positives = 266/403 (66%), Gaps = 54/403 (13%)
Query: 69 NIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQ 128
N DLPTPKEIC LD++VIGQ +AKK+ AVYNHYKR+ S+ +
Sbjct: 59 NGDLPTPKEICNILDQYVIGQTQAKKN---------------LAVAVYNHYKRLDQSATK 103
Query: 129 KELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVN 188
+ DE VE+ KSN+L++GPTGSGKTLLA+TLAR+++
Sbjct: 104 -------------------------DKDE-VEIAKSNILVIGPTGSGKTLLAQTLARLLD 137
Query: 189 VPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRN 247
VPF + DAT LT+AGYVGED E+++ KLL D+D+E AQRGIVYIDE+DKI K+++ +
Sbjct: 138 VPFVMADATTLTEAGYVGEDVENIMQKLLQKCDYDIEKAQRGIVYIDEIDKISRKSDNPS 197
Query: 248 NGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLE 307
RDVSGEGVQQALLK++EGTV +VP P G RKHP + + +DT +ILFICGGAF GL+
Sbjct: 198 ITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPNQEFVQLDTTNILFICGGAFDGLD 255
Query: 308 KTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPI 367
K I R + IGFGA V++ D +L V+ DL+ +GLIPEF+GR P
Sbjct: 256 KIIRRRSEKGGIGFGAEVKSK------DDLREVGEVLREVEPEDLIKFGLIPEFVGRLPA 309
Query: 368 LVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGAR 427
+ +L +L+ED L+++L+EPKNAL +QY K+F M V+L F + ALRLI+KKA+ + TGAR
Sbjct: 310 IATLESLDEDALMKILVEPKNALTKQYAKLFKMEGVELEFRESALRLISKKALERKTGAR 369
Query: 428 GLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
GLR+++E+ L E MF++P S++ V+VD+ V + P
Sbjct: 370 GLRSIMEHALLEIMFDLP----SISNLTKVVVDEGVVRGNNPP 408
>gi|398847903|ref|ZP_10604777.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM84]
gi|398250861|gb|EJN36153.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM84]
Length = 427
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 259/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LSVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ + DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKGDE-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGFGA VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTKGGIGFGAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M +V L F DAL+ +A++A+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYAKLFEMESVDLEFRSDALKAVARRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP K V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIPSQK----EVSKVVIDESVIEGTSKP 410
>gi|167628598|ref|YP_001679097.1| ATP-dependent protease ATP-binding subunit ClpX [Heliobacterium
modesticaldum Ice1]
gi|238687890|sp|B0TFI7.1|CLPX_HELMI RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167591338|gb|ABZ83086.1| ATP-dependent clp protease, ATP-binding subunit clpx
[Heliobacterium modesticaldum Ice1]
Length = 420
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 193/376 (51%), Positives = 255/376 (67%), Gaps = 53/376 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI + LD++VIGQE+AKK+ AVYNHYKRI
Sbjct: 61 DVPKPKEIREILDQYVIGQEQAKKA---------------LSVAVYNHYKRIN------- 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
LGS + +EL+KSN++++GPTGSGKTLLA+TLARI+NVP
Sbjct: 99 -----------LGSKIDD----------IELQKSNIIMLGPTGSGKTLLAQTLARILNVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A++GIVYIDE+DKI K+E+ +
Sbjct: 138 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I +DT +ILFICGGAF G+EK
Sbjct: 198 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQLDTTNILFICGGAFDGIEKL 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R ++GF A ++ L + DL+ +GLIPEF+GR P++V
Sbjct: 256 IMNRIGKKTMGFNADIKGKQEKK-------IGETLREILPVDLLKFGLIPEFVGRLPVIV 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+ED LV++L EPKNAL +QY+K F ++ V+L FTDDALR IA++A+ +NTGARGL
Sbjct: 309 TLDALDEDALVRILTEPKNALVKQYQKFFELDQVQLEFTDDALRAIAQEAIKRNTGARGL 368
Query: 430 RALLENILTEAMFEIP 445
RA+LE ++ + M++IP
Sbjct: 369 RAILEEVMLDVMYDIP 384
>gi|338999444|ref|ZP_08638087.1| ATP-dependent protease ATP-binding subunit ClpX [Halomonas sp.
TD01]
gi|338763593|gb|EGP18582.1| ATP-dependent protease ATP-binding subunit ClpX [Halomonas sp.
TD01]
Length = 426
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 265/400 (66%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP+EI LD++VIGQ+RAK M++ V AVYNHYKR
Sbjct: 65 LPTPREIRHTLDDYVIGQDRAK----------MVLSV-----AVYNHYKR---------- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
L + V+ G+ VEL KSN+LL+GPTGSGKTLLA+T+AR++NVPF
Sbjct: 100 ----------LKTEVREGD--------VELGKSNILLIGPTGSGKTLLAETMARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE A+RGIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAERGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT +VP P G RKHP+ + + ++T +ILFI GGAF GL+K I
Sbjct: 202 DVSGEGVQQALLKLIEGTTASVP-PQGG-RKHPQQEFVQVNTANILFIVGGAFAGLDKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + IGF A V++ + G+ LL V+ DLV +GLIPEF+GR P++ +
Sbjct: 260 RDRAEKGGIGFNASVKSKESSRGV------GELLADVEPDDLVKFGLIPEFVGRLPVIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ LNED LVQ+L EPKN+L +QY K+F M +V L F DDALR +A KAM + TGARGLR
Sbjct: 314 LTELNEDALVQILTEPKNSLVKQYAKLFEMEDVTLEFRDDALRAVATKAMERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE++L + M+EIP + V+ V++D + P
Sbjct: 374 SILESVLLDTMYEIPSLE----GVSKVVIDSSVIAGESEP 409
>gi|60115356|gb|AAX14030.1| ATP-binding subunit heat shock protein ClpX [Azospirillum
brasilense]
Length = 422
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 197/394 (50%), Positives = 264/394 (67%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I LD++VIGQ AK+ AV+NHYKR+ H++
Sbjct: 63 VPTPQDIHAVLDDYVIGQHHAKRV---------------LSVAVHNHYKRLAHATKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLVGPTGCGKTLLAQTLARIIDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AA + AAQRGIVYIDEVDKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAARLNRRAAQRGIVYIDEVDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP--PQGGRKHPQQEFLQVDTSNILFICGGAFAGLDKII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
++R + +SIGFGA VR D T +L V+ DL+ +GLIPEFIGR P++ +
Sbjct: 258 AQRGRGTSIGFGADVRG-------PDERRTGDILREVEPEDLLKFGLIPEFIGRLPVVAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
LS L+E LV++L +PKNAL +QY+++F M NV+L F+DDALR I+ KA+ + TGARGLR
Sbjct: 311 LSDLDETALVEILTKPKNALVKQYQRLFEMENVRLEFSDDALRTISHKAIQRKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E+IL + MF++P G S V +LV+KE V
Sbjct: 371 SIMESILLDPMFDLP----GLSGVEEILVNKEVV 400
>gi|260892393|ref|YP_003238490.1| ATP-dependent protease ATP-binding subunit ClpX [Ammonifex degensii
KC4]
gi|260864534|gb|ACX51640.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ammonifex
degensii KC4]
Length = 420
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 258/401 (64%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLPTPKEI + LD++VIGQE AKK+ AVYNHYKR++
Sbjct: 60 DLPTPKEIKEFLDQYVIGQEHAKKT---------------LAVAVYNHYKRVH------- 97
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
LG + VEL+KSN+L++GPTG GKTLLA+TLAR +NVP
Sbjct: 98 -----------LGGKIDD----------VELQKSNILMLGPTGCGKTLLAQTLARFLNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E A+RGIVYIDEVDKI K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLVQAADYDIEKAERGIVYIDEVDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ NVP P G RKHP + I IDT +ILFICGGAF G+EK
Sbjct: 197 RDVSGEGVQQALLKILEGTIANVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFEGIEKI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R S+GFGA + +L + DL+ +GLIPEF+GR PI+V
Sbjct: 255 IQNRISRKSMGFGAELVVQREQD-------LGKILRQILPQDLLKFGLIPEFVGRLPIIV 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L ED LV++L EP+NAL RQY+K+F ++ V+L F +A+R IA++A+ +NTGARGL
Sbjct: 308 TLDPLTEDDLVRILTEPRNALIRQYQKLFELDGVQLEFQPEAIRAIAQEALRRNTGARGL 367
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA+LE I+ M+EIP V ++ ++ V + P
Sbjct: 368 RAILEEIMLNVMYEIP----SRGDVTKCIISRDTVLKREQP 404
>gi|21230440|ref|NP_636357.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66769566|ref|YP_244328.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. campestris str. 8004]
gi|188992774|ref|YP_001904784.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. campestris str. B100]
gi|384426844|ref|YP_005636201.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. raphani 756C]
gi|23813857|sp|Q8PBY5.1|CLPX_XANCP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|81304479|sp|Q4URL5.1|CLPX_XANC8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|229485950|sp|B0RTF5.1|CLPX_XANCB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|21112002|gb|AAM40281.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66574898|gb|AAY50308.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
campestris pv. campestris str. 8004]
gi|167734534|emb|CAP52744.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
campestris pv. campestris]
gi|341935944|gb|AEL06083.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
campestris pv. raphani 756C]
Length = 428
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 203/424 (47%), Positives = 272/424 (64%), Gaps = 62/424 (14%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E R+S LP P+EI + LD++VIGQ RAK++
Sbjct: 48 NDIIREELEEKAQSARSS-----LPKPREILEVLDQYVIGQLRAKRT------------- 89
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKRI S +NDE VEL KSN+LL
Sbjct: 90 --LAVAVYNHYKRIESRS---------------------------KNDE-VELAKSNILL 119
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ
Sbjct: 120 VGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQ 179
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
+GIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ +
Sbjct: 180 QGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEF 237
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQDS-SIGFGAPVRANMRTGGLTDALVTSSLLES 346
+ +DTK+ILFICGGAF GL+K I R D+ IGFGA V+++ R + +L
Sbjct: 238 LQVDTKNILFICGGAFAGLDKVIQARSNDAGGIGFGAKVKSSERKQEV------GKILAE 291
Query: 347 VDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLH 406
V+ DL+ +GLIPEF+GR P++ +L L+E L+++L EPKNA+ +Q+KK+F M +V+L
Sbjct: 292 VEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFEMESVELE 351
Query: 407 FTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
F DAL IAKKA+ + TGARGLR ++E++L + M+E+P +V+ V+VD+ +
Sbjct: 352 FRPDALSAIAKKALKRKTGARGLRTIVESVLLDTMYELP----SQENVSKVVVDESVIEH 407
Query: 467 VDAP 470
P
Sbjct: 408 KSEP 411
>gi|313201271|ref|YP_004039929.1| ATP-dependent clp protease, ATP-binding subunit clpx [Methylovorus
sp. MP688]
gi|312440587|gb|ADQ84693.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylovorus
sp. MP688]
Length = 423
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 196/403 (48%), Positives = 266/403 (66%), Gaps = 54/403 (13%)
Query: 69 NIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQ 128
N DLPTPKEIC LD++VIGQ +AKK+ AVYNHYKR+ S+ +
Sbjct: 59 NGDLPTPKEICNILDQYVIGQTQAKKN---------------LAVAVYNHYKRLDQSATK 103
Query: 129 KELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVN 188
+ DE VE+ KSN+L++GPTGSGKTLLA+TLAR+++
Sbjct: 104 -------------------------DKDE-VEIAKSNILVIGPTGSGKTLLAQTLARLLD 137
Query: 189 VPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRN 247
VPF + DAT LT+AGYVGED E+++ KLL D+D+E AQRGIVYIDE+DKI K+++ +
Sbjct: 138 VPFVMADATTLTEAGYVGEDVENIMQKLLQKCDYDIEKAQRGIVYIDEIDKISRKSDNPS 197
Query: 248 NGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLE 307
RDVSGEGVQQALLK++EGTV +VP P G RKHP + + +DT +ILFICGGAF GL+
Sbjct: 198 ITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPNQEFVQLDTTNILFICGGAFDGLD 255
Query: 308 KTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPI 367
K I R + IGFGA V++ D +L V+ DL+ +GLIPEF+GR P
Sbjct: 256 KIIRRRSEKGGIGFGAEVKSK------DDLREVGEVLREVEPEDLIKFGLIPEFVGRLPA 309
Query: 368 LVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGAR 427
+ +L +L+ED L+++L+EPKNAL +QY K+F M V+L F + ALRLI+KKA+ + TGAR
Sbjct: 310 IATLESLDEDALMKILVEPKNALTKQYAKLFKMEGVELEFRESALRLISKKALERKTGAR 369
Query: 428 GLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
GLR+++E+ L E MF++P S++ V+VD+ V + P
Sbjct: 370 GLRSIMEHALLEIMFDLP----SISNLTKVVVDEGVVRGNNPP 408
>gi|89256250|ref|YP_513612.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica LVS]
gi|156502311|ref|YP_001428376.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|254367563|ref|ZP_04983589.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
holarctica 257]
gi|254369240|ref|ZP_04985252.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
holarctica FSC022]
gi|422938669|ref|YP_007011816.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica FSC200]
gi|423050598|ref|YP_007009032.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica F92]
gi|89144081|emb|CAJ79332.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
holarctica LVS]
gi|134253379|gb|EBA52473.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
holarctica 257]
gi|156252914|gb|ABU61420.1| ATP-dependent Clp protease, ATP-binding subunit [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|157122190|gb|EDO66330.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
holarctica FSC022]
gi|407293820|gb|AFT92726.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica FSC200]
gi|421951320|gb|AFX70569.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica F92]
Length = 417
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 195/378 (51%), Positives = 245/378 (64%), Gaps = 51/378 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI K LD+++IGQ+ AKK AVYNHYKRI
Sbjct: 56 LPKPVEIKKYLDDYIIGQDNAKKV---------------LSVAVYNHYKRI--------- 91
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N+ D+ EL+KSNVLL+GPTGSGKTL A+TLA+++NVPF
Sbjct: 92 ------------------TSNLTKDDDTELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPF 133
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVG+D E+++ +LL ADFDV AQ+GI+YIDE+DKI K+ES + R
Sbjct: 134 AIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKSESTSITR 193
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP D I +DT DILFICGGAF G+EK I
Sbjct: 194 DVSGEGVQQALLKLIEGTVSSVP-PKGG-RKHPNQDMIQVDTSDILFICGGAFAGIEKVI 251
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R SIGF A V ++L + L++ ++S DL +GLIPE IGR PI+
Sbjct: 252 KHRMDKVSIGFNADVIQQ------KNSLDSDKLMQKIESEDLTRFGLIPELIGRLPIVTV 305
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L E+ LV++L EPKNAL +QY K+F +NV + FTD AL IAKKA+ K TGARGLR
Sbjct: 306 LNELKEEDLVRILTEPKNALIKQYIKLFKFDNVNIEFTDQALVEIAKKAITKKTGARGLR 365
Query: 431 ALLENILTEAMFEIPETK 448
+LEN+L E MF IP ++
Sbjct: 366 TILENVLLEVMFHIPSSE 383
>gi|388456733|ref|ZP_10139028.1| ATP-dependent protease ATP-binding subunit ClpX [Fluoribacter
dumoffii Tex-KL]
Length = 424
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 260/407 (63%), Gaps = 56/407 (13%)
Query: 65 NSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYH 124
+ E + LP+PKEI LDE+VIGQ AKK AVYNHYKR+ H
Sbjct: 56 HEEAEVRLPSPKEISTFLDEYVIGQSHAKKV---------------LSVAVYNHYKRLQH 100
Query: 125 SSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLA 184
S ++ VEL KSN+LL+GPTGSGKTLLA+TLA
Sbjct: 101 KS-----------------------------EDGVELGKSNILLIGPTGSGKTLLAQTLA 131
Query: 185 RIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KA 243
RI+NVPF + DAT LT+AGYVGED E+++ KLL D+DV+ AQ GIVYIDE+DKI K+
Sbjct: 132 RILNVPFAMADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAQHGIVYIDEIDKISRKS 191
Query: 244 ESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAF 303
++ + RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT +ILFICGGAF
Sbjct: 192 DNPSITRDVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTSNILFICGGAF 249
Query: 304 VGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIG 363
GLEK I ER S IGF A ++ +D + S +L ++S DL+ YGLIPEF+G
Sbjct: 250 AGLEKVIRERSDKSGIGFSAQLKNKKEN---SDEI--SKVLNQLESDDLIKYGLIPEFVG 304
Query: 364 RFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKN 423
R P++ +L L+E L+ +L PKNAL +Q++ +F M V+L F +DAL IAKKA+ +
Sbjct: 305 RLPVVATLQELDESALIDILTNPKNALTKQFQSLFKMEGVELEFREDALVAIAKKALERK 364
Query: 424 TGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
GARGLRA+LENIL + M+E+P + V V+VD+ AV S P
Sbjct: 365 MGARGLRAILENILLDTMYELPSLE----GVIKVVVDESAVNSSSKP 407
>gi|330814218|ref|YP_004358457.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Candidatus
Pelagibacter sp. IMCC9063]
gi|327487313|gb|AEA81718.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Candidatus
Pelagibacter sp. IMCC9063]
Length = 380
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 201/393 (51%), Positives = 265/393 (67%), Gaps = 58/393 (14%)
Query: 56 ETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAV 115
E N ++N EG +P+PKEI LDE+VIGQ+ AK+ IL AV
Sbjct: 6 EESKSNFSKNEEG---VPSPKEIFSTLDEYVIGQKTAKQ-----IL----------SVAV 47
Query: 116 YNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSG 175
+NHYKR+ + N + D VEL KSN+LLMGPTG G
Sbjct: 48 HNHYKRLNYE------------------------GKNNKGD--VELAKSNILLMGPTGCG 81
Query: 176 KTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYID 235
KTLLA+TLARI++VPFT+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYID
Sbjct: 82 KTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQAADYNVEKAQRGIVYID 141
Query: 236 EVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKD 294
EVDKI K E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +
Sbjct: 142 EVDKISRKTENPSITRDVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTN 199
Query: 295 ILFICGGAFVGLEKTISERRQDSSIGFGAPV--RANMRTGGLTDALVTSSLLESVDSGDL 352
ILFICGGAF G++K IS R + SSIGFG+ + +A + G LL+S++ DL
Sbjct: 200 ILFICGGAFAGIDKIISSRDKGSSIGFGSKLNTKAEKKVG---------ELLKSIEPEDL 250
Query: 353 VAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDAL 412
+ +GLIPEFIGR PI+ +L L+ED LV++L EPKN+L +QY K+F + VKL+F+ DAL
Sbjct: 251 LKFGLIPEFIGRLPIISTLEDLDEDSLVKILEEPKNSLTKQYAKLFEIEGVKLNFSKDAL 310
Query: 413 RLIAKKAMAKNTGARGLRALLENILTEAMFEIP 445
+ IA KA+ + TGARGLR+++E +L E MF++P
Sbjct: 311 KAIAGKAILRKTGARGLRSIIEEVLLETMFDLP 343
>gi|395780055|ref|ZP_10460522.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
washoensis 085-0475]
gi|395419322|gb|EJF85622.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
washoensis 085-0475]
Length = 424
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 204/430 (47%), Positives = 278/430 (64%), Gaps = 69/430 (16%)
Query: 36 EIMGGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKS 95
E+ IR++ +S+GI++ +PTP+EI LD++VIGQ+ AK+
Sbjct: 44 ELCMDIIREENKSSGIKARD---------------GVPTPQEIITVLDDYVIGQQHAKRV 88
Query: 96 HIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEN 155
AV+NHYKR+ H S KS N
Sbjct: 89 ---------------LSVAVHNHYKRLAHQS--------------------KS------N 107
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
D +EL KSN+LL+GPTG GKT LA+TLARI++VPFT+ DAT LT+AGYVGED E+++ K
Sbjct: 108 D--IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILK 165
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
LL AAD++VE AQRGIVYIDEVDKI KA++ + RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQAADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVP- 224
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
P G RKHP+ + + +DT +ILFICGGAF GLE+ IS R + +SIGF A V+A
Sbjct: 225 PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA------- 276
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
D + ++ DL+ +GLIPEFIGR PI+ +L L+ + LVQ+L +PKNAL +QY
Sbjct: 277 PDERCVGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALVQILSQPKNALVKQY 336
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETK-IGTSS 453
+++F M NV+L F +DALR+IAKKA+ + TGARGLR+++E IL E MFE+P + +
Sbjct: 337 QRLFEMENVELAFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFELPALEGVQKVV 396
Query: 454 VNAVLVDKEA 463
+++ +VD EA
Sbjct: 397 ISSDVVDSEA 406
>gi|118497647|ref|YP_898697.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
novicida U112]
gi|194323618|ref|ZP_03057394.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Francisella
novicida FTE]
gi|118423553|gb|ABK89943.1| ATP-dependent Clp protease subunit X [Francisella novicida U112]
gi|194321982|gb|EDX19464.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Francisella
tularensis subsp. novicida FTE]
Length = 417
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 195/378 (51%), Positives = 245/378 (64%), Gaps = 51/378 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI K LD+++IGQ+ AKK AVYNHYKRI
Sbjct: 56 LPKPVEIKKYLDDYIIGQDNAKKV---------------LSVAVYNHYKRI--------- 91
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N+ D+ EL+KSNVLL+GPTGSGKTL A+TLA+++NVPF
Sbjct: 92 ------------------TSNLTKDDDTELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPF 133
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVG+D E+++ +LL ADFDV AQ+GI+YIDE+DKI K+ES + R
Sbjct: 134 AIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKSESTSITR 193
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP D I +DT DILFICGGAF G+EK I
Sbjct: 194 DVSGEGVQQALLKLIEGTVSSVP-PKGG-RKHPNQDMIQVDTSDILFICGGAFAGIEKVI 251
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R SIGF A V ++L + L++ ++S DL +GLIPE IGR PI+
Sbjct: 252 KHRMDKVSIGFNADVIQQ------KNSLDSDKLMQKIESEDLTRFGLIPELIGRLPIVTV 305
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L E+ LV++L EPKNAL +QY K+F +NV + FTD AL IAKKA+ K TGARGLR
Sbjct: 306 LNELKEEDLVRILTEPKNALIKQYIKLFKFDNVNIEFTDQALVEIAKKAITKKTGARGLR 365
Query: 431 ALLENILTEAMFEIPETK 448
+LEN+L E MF IP ++
Sbjct: 366 TILENVLLEVMFHIPSSE 383
>gi|194364615|ref|YP_002027225.1| ATP-dependent protease ATP-binding subunit ClpX [Stenotrophomonas
maltophilia R551-3]
gi|238693450|sp|B4SLN2.1|CLPX_STRM5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|194347419|gb|ACF50542.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Stenotrophomonas maltophilia R551-3]
Length = 429
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 204/424 (48%), Positives = 272/424 (64%), Gaps = 62/424 (14%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E R+S LP P+EI + LD++VIGQ RAK++
Sbjct: 48 NDIIREELEEKAQSARSS-----LPKPREILEVLDQYVIGQNRAKRT------------- 89
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKRI S QK NDE VEL KSN+LL
Sbjct: 90 --LAVAVYNHYKRI--ESRQK-------------------------NDE-VELAKSNILL 119
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFT+ DAT LT+AGYVGED E+++ KLL D+DVE AQ
Sbjct: 120 VGPTGSGKTLLAETLARLLNVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQ 179
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
+GIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ +
Sbjct: 180 QGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEF 237
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLES 346
+ +DTK+ILFICGGAF GL+K I R D SIGFGA V++ R + +L
Sbjct: 238 LQVDTKNILFICGGAFAGLDKVIQARSTDVGSIGFGAKVKSAERKQEV------GKVLAE 291
Query: 347 VDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLH 406
V+ DL+ +GLIPEF+GR P++ +L L+E L+++L EPKNA+ +Q+KK+F M NV+L
Sbjct: 292 VEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFEMENVELE 351
Query: 407 FTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
F DAL IA+KA+ + TGARGLR ++E++L + M+++P +V+ V+VD+ +
Sbjct: 352 FRPDALSAIARKALKRKTGARGLRTIVESVLLDTMYDLP----SQENVSKVVVDESVIEH 407
Query: 467 VDAP 470
P
Sbjct: 408 KSEP 411
>gi|241760359|ref|ZP_04758454.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
flavescens SK114]
gi|241319237|gb|EER55715.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
flavescens SK114]
Length = 421
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 207/446 (46%), Positives = 275/446 (61%), Gaps = 71/446 (15%)
Query: 40 GFIRKDGESNGIESE---SETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSH 96
G + +D ES IE+E ++ EN + LPTP EI L++ VIGQE AKK+
Sbjct: 38 GMMLQDNESGEIENELAKAKEENAEKK--------LPTPAEIVANLNDHVIGQEHAKKA- 88
Query: 97 IFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEND 156
+VYNHYKR+ H + +
Sbjct: 89 --------------LAVSVYNHYKRLRHPKAEGK-------------------------- 108
Query: 157 EIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKL 216
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPF + DAT LT+AGYVGED E ++ KL
Sbjct: 109 --VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKL 166
Query: 217 LAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIP 275
L DFDVE AQRGIVYIDE+DKI K+++ + RDVSGEGVQQALLK++EGTV +VP P
Sbjct: 167 LGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP-P 225
Query: 276 DNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLT 335
G RKHP + I +DT +ILFICGGAF GLEK I +R + IGFGA V + +
Sbjct: 226 QGG-RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSKDENADI- 283
Query: 336 DALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYK 395
S+L E+V+ DL+ +GLIPE IGR P++ +L+ L+ED LV +L EPKNAL +QY+
Sbjct: 284 -----SALFETVEPEDLIKFGLIPELIGRLPVIATLAELDEDALVNILTEPKNALVKQYQ 338
Query: 396 KMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVN 455
+F+M +V L F +DALR IAK AM + TGARGLR+++E L + M+ +P+ K V
Sbjct: 339 TLFAMEDVGLEFEEDALRSIAKLAMERKTGARGLRSIVERCLLDTMYTLPDLK----DVA 394
Query: 456 AVLVDKEAVGSVDAPGCGAKILHGDG 481
V+++KE V + P K+ DG
Sbjct: 395 KVVINKEVVEKGEQP----KLFREDG 416
>gi|407071671|ref|ZP_11102509.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
cyclitrophicus ZF14]
Length = 426
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 262/401 (65%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP+EI + LD++VIGQE AKK AVYNHYKR+
Sbjct: 65 LPTPREIREHLDDYVIGQEYAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 ---------------RNGDTTAEG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLVEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + S IGFGA VR+ T + + L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVETGSGIGFGAEVRSKDETKTIGE------LFTQVEPEDLVKYGLIPEFIGRLPVTT 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY +F + + +L F +DALR IAKKAM + TGARGL
Sbjct: 315 TLTELDEEALIQILCEPKNALTKQYAALFELEDTELEFREDALRAIAKKAMNRKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P ++ V+ V++D+ + P
Sbjct: 375 RSILEGVLLETMYELP----SSTDVSKVVIDESVINGESEP 411
>gi|254374462|ref|ZP_04989943.1| hypothetical protein FTDG_00631 [Francisella novicida GA99-3548]
gi|385793030|ref|YP_005826006.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|151572181|gb|EDN37835.1| hypothetical protein FTDG_00631 [Francisella novicida GA99-3548]
gi|332678355|gb|AEE87484.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
cf. novicida Fx1]
Length = 417
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 195/378 (51%), Positives = 245/378 (64%), Gaps = 51/378 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI K LD+++IGQ+ AKK AVYNHYKRI
Sbjct: 56 LPKPVEIKKYLDDYIIGQDNAKKV---------------LSVAVYNHYKRI--------- 91
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N+ D+ EL+KSNVLL+GPTGSGKTL A+TLA+++NVPF
Sbjct: 92 ------------------TSNLTKDDDTELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPF 133
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVG+D E+++ +LL ADFDV AQ+GI+YIDE+DKI K+ES + R
Sbjct: 134 AIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKSESTSITR 193
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP D I +DT DILFICGGAF G+EK I
Sbjct: 194 DVSGEGVQQALLKLIEGTVSSVP-PKGG-RKHPNQDMIQVDTSDILFICGGAFAGIEKVI 251
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R SIGF A V ++L + L++ ++S DL +GLIPE IGR PI+
Sbjct: 252 KHRMDKVSIGFNADVIQQ------KNSLDSDKLMQKIESEDLTRFGLIPELIGRLPIVTV 305
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L E+ LV++L EPKNAL +QY K+F +NV + FTD AL IAKKA+ K TGARGLR
Sbjct: 306 LNELKEEDLVRILTEPKNALIKQYIKLFKFDNVNIEFTDQALVEIAKKAITKKTGARGLR 365
Query: 431 ALLENILTEAMFEIPETK 448
+LEN+L E MF IP ++
Sbjct: 366 TILENVLLEVMFHIPSSE 383
>gi|208779708|ref|ZP_03247052.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Francisella
novicida FTG]
gi|254373012|ref|ZP_04988501.1| hypothetical protein FTCG_00586 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570739|gb|EDN36393.1| hypothetical protein FTCG_00586 [Francisella novicida GA99-3549]
gi|208744163|gb|EDZ90463.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Francisella
novicida FTG]
Length = 417
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 195/378 (51%), Positives = 245/378 (64%), Gaps = 51/378 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI K LD+++IGQ+ AKK AVYNHYKRI
Sbjct: 56 LPKPVEIKKYLDDYIIGQDNAKKV---------------LSVAVYNHYKRI--------- 91
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N+ D+ EL+KSNVLL+GPTGSGKTL A+TLA+++NVPF
Sbjct: 92 ------------------TSNLTKDDDTELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPF 133
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVG+D E+++ +LL ADFDV AQ+GI+YIDE+DKI K+ES + R
Sbjct: 134 AIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKSESTSITR 193
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP D I +DT DILFICGGAF G+EK I
Sbjct: 194 DVSGEGVQQALLKLIEGTVSSVP-PKGG-RKHPNQDMIQVDTSDILFICGGAFAGIEKVI 251
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R SIGF A V ++L + L++ ++S DL +GLIPE IGR PI+
Sbjct: 252 KHRMDKVSIGFNADVIQQ------KNSLDSDKLMQKIESEDLTRFGLIPELIGRLPIVTV 305
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L E+ LV++L EPKNAL +QY K+F +NV + FTD AL IAKKA+ K TGARGLR
Sbjct: 306 LNELKEEDLVRILTEPKNALIKQYIKLFKFDNVSIEFTDQALVEIAKKAITKKTGARGLR 365
Query: 431 ALLENILTEAMFEIPETK 448
+LEN+L E MF IP ++
Sbjct: 366 TILENVLLEVMFHIPSSE 383
>gi|86148884|ref|ZP_01067135.1| ATP-dependent protease ATP-binding subunit [Vibrio sp. MED222]
gi|218710173|ref|YP_002417794.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio splendidus
LGP32]
gi|254763873|sp|B7VHZ9.1|CLPX_VIBSL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|85833327|gb|EAQ51534.1| ATP-dependent protease ATP-binding subunit [Vibrio sp. MED222]
gi|218323192|emb|CAV19369.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio
splendidus LGP32]
Length = 426
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 262/401 (65%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP+EI + LD++VIGQE AKK AVYNHYKR+
Sbjct: 65 LPTPREIREHLDDYVIGQEYAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 ---------------RNGDTTAEG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLVEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + S IGFGA VR+ T + + L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVETGSGIGFGAEVRSKDETKTIGE------LFTQVEPEDLVKYGLIPEFIGRLPVTT 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY +F + + +L F +DALR IAKKAM + TGARGL
Sbjct: 315 TLTELDEEALIQILCEPKNALTKQYAALFELEDTELEFREDALRAIAKKAMNRKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P ++ V+ V++D+ + P
Sbjct: 375 RSILEGVLLETMYELP----SSTDVSKVVIDESVINGESEP 411
>gi|325186763|emb|CCA21310.1| ATPdependent Clp protease ATPbinding subunit clpX putative [Albugo
laibachii Nc14]
Length = 556
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 210/432 (48%), Positives = 273/432 (63%), Gaps = 60/432 (13%)
Query: 74 TPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSL---QKE 130
TP+ +C+GLD++VIGQE KK AV+NHYKR++ L QKE
Sbjct: 125 TPRMMCQGLDDYVIGQESVKKV---------------LSVAVHNHYKRLHLLDLMRAQKE 169
Query: 131 L-----------------------VSDHLYVDSILG-----SGVKSGNCNVENDEI---V 159
+S L ++ +L S +SG EN +I V
Sbjct: 170 AAVAKATMLKSRIELNDLPEGLSDMSRRLLLEQVLSGLNEKSWSESGVTVTENLKILEDV 229
Query: 160 ELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAA 219
EL+K+NVLL+GPTGSGKTLLAKTLAR+V VP I DAT LTQAGYVGED ESVL+KL A
Sbjct: 230 ELDKTNVLLLGPTGSGKTLLAKTLARLVKVPIVIADATCLTQAGYVGEDVESVLFKLYQA 289
Query: 220 ADFDVEAAQRGIVYIDEVDKIVKAESRNN-GRDVSGEGVQQALLKMLEGTVVNVPIPDNG 278
+ +++EA QRGIVYIDE+DKI + + N RDVSGEGVQQALLKMLEG +VN IP+ G
Sbjct: 290 SGYNIEATQRGIVYIDEIDKISRKNATTNIARDVSGEGVQQALLKMLEGNLVN--IPEKG 347
Query: 279 PRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDAL 338
RK+PR D + IDT +ILFICGGAF GLEKTI+ R SSIGFGA M L
Sbjct: 348 GRKNPRDDCVTIDTSNILFICGGAFAGLEKTIAARTCRSSIGFGAI----MPNTDLHMQK 403
Query: 339 VTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMF 398
++ +E+V+ DL+A+GLIPEFIGR P++VS L + ++V++L EPKN++ RQ+K +F
Sbjct: 404 EAAACMENVEPEDLIAFGLIPEFIGRLPVIVSTRGLQKQEMVRILSEPKNSIVRQFKALF 463
Query: 399 SMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVL 458
++ V+ T AL +A+ A+ KNTGARGLR++LE L + MF++P+ SV AV
Sbjct: 464 ALQGVEFVVTKGALEAVAEIALEKNTGARGLRSILERTLVDVMFDLPD----LPSVRAVH 519
Query: 459 VDKEAVGSVDAP 470
VD + S AP
Sbjct: 520 VDTGTILSRKAP 531
>gi|406939454|gb|EKD72472.1| hypothetical protein ACD_45C00667G0003 [uncultured bacterium]
Length = 422
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 262/400 (65%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EICK LDE+VIGQ AKK+ AVYNHYK+ L
Sbjct: 63 LPTPAEICKILDEYVIGQSYAKKT---------------LSVAVYNHYKK---------L 98
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ H +N+EI EL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 99 RTKH------------------KNNEI-ELNKSNILLVGPTGSGKTLLAETLARLLNVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E+++ KLL D+DV AQ GI+YIDE+DKI K+E+ + R
Sbjct: 140 VIADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAQTGIIYIDEIDKISRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + I +DTK++LFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFIQVDTKNMLFICGGAFAGLEKVI 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
ER + S IGF A + + D+ LL V+ DL+ +GLIPE IGR P++ +
Sbjct: 258 RERSERSGIGFSAEIHSK------EDSKSIDQLLHEVEPADLIKFGLIPELIGRLPVVAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+++ LV++L EPKNAL +QY+K+F M+ L F D AL+LIA++ + K TGARGLR
Sbjct: 312 LEELDKEALVRILTEPKNALVKQYRKLFEMDGASLEFRDSALQLIAERCVEKKTGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+E+P ++V V++D+ +V +P
Sbjct: 372 SILEKVLLDTMYELP----SLNNVAKVIIDESSVKGDSSP 407
>gi|189424986|ref|YP_001952163.1| ATP-dependent protease ATP-binding subunit ClpX [Geobacter lovleyi
SZ]
gi|238692096|sp|B3E1Z3.1|CLPX_GEOLS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|189421245|gb|ACD95643.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Geobacter
lovleyi SZ]
Length = 419
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 200/400 (50%), Positives = 258/400 (64%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI + LDE+VIGQE AKK AVYNHYKRI +
Sbjct: 63 LPKPKEIKEFLDEYVIGQETAKKV---------------LSVAVYNHYKRIERPA----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G+ VE++KSN+L++GPTGSGKTLLA+TLAR++ VPF
Sbjct: 103 ---------------KPGD--------VEMQKSNILILGPTGSGKTLLAQTLARMLKVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E+++ LL AAD+DVE AQ+GIVYIDE+DKI KAES + R
Sbjct: 140 AIADATNLTEAGYVGEDVENIILSLLQAADYDVERAQKGIVYIDEIDKIARKAESPSLTR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV + IP G RKHP+ + + +DT +ILFICGGAF GL+ I
Sbjct: 200 DVSGEGVQQALLKIIEGTVAS--IPPKGGRKHPQQEFLKVDTSNILFICGGAFAGLDGVI 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R ++GFGA V+ + LL V DL+ YG IPEFIGR P+L S
Sbjct: 258 QQRIGKKTLGFGADVKKKLEKKA-------GELLLQVTPEDLLKYGYIPEFIGRLPMLAS 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L+ED LVQ+L EPKNAL +QY+K+F M V+L FTD AL IAK+A+ +NTGARGLR
Sbjct: 311 LTELDEDALVQILTEPKNALTKQYQKLFDMEGVRLRFTDGALVSIAKEALKRNTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
A+LE + + M+EIP ++V V++ ++ + + P
Sbjct: 371 AILEGAMLDIMYEIP----SQNTVREVVISEDVIYHKERP 406
>gi|163781837|ref|ZP_02176837.1| ATP-dependent protease ATP-binding subunit [Hydrogenivirga sp.
128-5-R1-1]
gi|159883057|gb|EDP76561.1| ATP-dependent protease ATP-binding subunit [Hydrogenivirga sp.
128-5-R1-1]
Length = 413
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 199/402 (49%), Positives = 263/402 (65%), Gaps = 57/402 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLPTP+ I LDE+VIGQERAKK AVYNHYKRI
Sbjct: 59 DLPTPERIKSILDEYVIGQERAKKV---------------LSVAVYNHYKRI-------- 95
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
K+ ++ D VE+EKSN+LL+GPTGSGKTL+AKTLA+I+NVP
Sbjct: 96 ----------------KAKEAGLDLDG-VEVEKSNILLIGPTGSGKTLMAKTLAKILNVP 138
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNG- 249
F I DAT+LT+AGYVGED E+VL +LL +DV+AAQ+GIVYIDE+DK+ K N
Sbjct: 139 FAIADATSLTEAGYVGEDVENVLTRLLQNCGYDVDAAQKGIVYIDEIDKVAKKSGINPSI 198
Query: 250 -RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEK 308
RDVSGEGVQQ+LLK++EGTV NVP P G RKHP + I IDT DILFICGGAFVGLE+
Sbjct: 199 TRDVSGEGVQQSLLKIIEGTVANVP-PQGG-RKHPHQEFIQIDTTDILFICGGAFVGLEE 256
Query: 309 TISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I R S++GF + ++ +++ V+ DL+ +GLIPEF+GR P++
Sbjct: 257 IIKHRIGKSTMGFESSIKKVEE---------EDNVVALVEPDDLIKFGLIPEFVGRLPVI 307
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L ++ LV++L+EPKNAL +QYKK+F ++ V+L FT++AL+ IA +A+ + TGARG
Sbjct: 308 TTLDELTQEDLVRILVEPKNALVKQYKKLFEIDGVELEFTEEALKEIANEAIRRKTGARG 367
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LRA+LE+++TE MFEIP + V V++DK+ V P
Sbjct: 368 LRAILEDVMTEIMFEIPSMR----DVKKVIIDKDTVAKKQRP 405
>gi|389774766|ref|ZP_10192885.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter
spathiphylli B39]
gi|388438365|gb|EIL95120.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter
spathiphylli B39]
Length = 430
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 197/398 (49%), Positives = 264/398 (66%), Gaps = 56/398 (14%)
Query: 64 RNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIY 123
+ + G LP P+EI + LD++V+GQ RAKK+ AVYNHYKRI
Sbjct: 58 KAASGRTQLPKPREIRESLDQYVVGQSRAKKA---------------LAVAVYNHYKRI- 101
Query: 124 HSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTL 183
S QK +D+I EL KSN+LL+GPTGSGKTLLA+TL
Sbjct: 102 -ESRQK-------------------------SDDI-ELGKSNILLIGPTGSGKTLLAETL 134
Query: 184 ARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-K 242
AR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K
Sbjct: 135 ARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQSGIVYIDEIDKISRK 194
Query: 243 AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGA 302
+E+ + RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DTK+ILFICGGA
Sbjct: 195 SENPSITRDVSGEGVQQALLKLIEGTLASVP-PQGG-RKHPQQEFLQVDTKNILFICGGA 252
Query: 303 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFI 362
F GL+K I +R + + IGF A VR+ RT L +L V+ DLV +GLIPEF+
Sbjct: 253 FSGLDKVIQQRSETTGIGFSAEVRSKERTENL------GKVLAEVEPADLVRFGLIPEFV 306
Query: 363 GRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAK 422
GR P++ +L L+E LV++L EPKNA+ +Q++K+F M V+L F +AL+ IA+KA+ +
Sbjct: 307 GRLPVVATLDELDEAALVKILTEPKNAVTKQFRKLFEMEEVELEFRPEALQAIARKALKR 366
Query: 423 NTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVD 460
TGARGLR +LE +L + M+E+P + V+ V+VD
Sbjct: 367 KTGARGLRTILEQVLLDTMYELPSLE----HVSKVVVD 400
>gi|399888211|ref|ZP_10774088.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
arbusti SL206]
Length = 448
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 195/375 (52%), Positives = 256/375 (68%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQE AKKS AVYNHYKRI
Sbjct: 60 LPKPIEIKNYLDQYVIGQEEAKKS---------------LAVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N NV N++I EL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF
Sbjct: 96 ------------------NSNVSNEDI-ELQKSNILLLGPTGSGKTLLAQTLAKFLNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ AD+DVE A++GI+YIDE+DKI K+E+ + R
Sbjct: 137 AIADATTLTEAGYVGEDVENILLKLIQNADYDVERAEKGIIYIDEIDKIARKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV +VP P G RKHP + I I+T ++LFICGGAF G++K I
Sbjct: 197 DVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQINTTNVLFICGGAFDGVDKII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R + SS+GFGA V++ LL+ + GDL+ +GLIPEF+GR PILV+
Sbjct: 255 ERRTRKSSMGFGADVQSKKEKD-------MGILLKDIMPGDLLKFGLIPEFVGRLPILVT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L AL+E L+++L +PKNAL +QYKK+F M++V L F + AL+ IAK+A+ +NTGARGLR
Sbjct: 308 LDALDEKALIEILSKPKNALVKQYKKLFQMDSVDLSFKEAALKAIAKEAINRNTGARGLR 367
Query: 431 ALLENILTEAMFEIP 445
A++E+++ + MF+IP
Sbjct: 368 AIIEDMMKDIMFDIP 382
>gi|422344961|ref|ZP_16425884.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Selenomonas
noxia F0398]
gi|355376103|gb|EHG23364.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Selenomonas
noxia F0398]
Length = 421
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 260/401 (64%), Gaps = 56/401 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI LD++VIGQ+ AKKS AVYNHYKRI
Sbjct: 60 DIPKPKEIRHILDQYVIGQDEAKKS---------------LSVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N +E VEL KSN+L++GPTGSGKTLLA+TLARI+NVP
Sbjct: 97 -------------------NAGQNKNEDVELRKSNILMLGPTGSGKTLLAQTLARILNVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E AQRGI+YIDE+DKI K+E+ +
Sbjct: 138 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAQRGIIYIDEIDKIARKSENPSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT +VP P G RKHP+ + + IDT +ILFICGGAF G+E+
Sbjct: 198 RDVSGEGVQQALLKILEGTTASVP-PQGG-RKHPQQELLQIDTTNILFICGGAFDGIEEI 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R +GFGA VR+ R + + L V DL+ GLIPEFIGR P++V
Sbjct: 256 IESRLGKKQMGFGAQVRSKKR-------VTVGASLSKVIPEDLMKNGLIPEFIGRLPVVV 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L++L+E LV++L EPKNAL +Q++K+ ++ V+L F DDALRLIAK+A+ TGARGL
Sbjct: 309 TLNSLDEKALVRILTEPKNALVKQFQKLLELDGVRLTFEDDALRLIAKEALTHKTGARGL 368
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E I+ M+E+P + V A V K+ + + P
Sbjct: 369 RSIIEGIMRNVMYEVPSIQ----GVTACQVTKDVIANRSDP 405
>gi|261365228|ref|ZP_05978111.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
mucosa ATCC 25996]
gi|288566311|gb|EFC87871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
mucosa ATCC 25996]
Length = 422
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 203/430 (47%), Positives = 269/430 (62%), Gaps = 60/430 (13%)
Query: 53 SESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGAC 112
S+ +E + S N LPTP EI L++ VIGQE+AKK+
Sbjct: 44 SDDLSEEKSATDASHPNNKLPTPAEIVANLNDHVIGQEQAKKA---------------LA 88
Query: 113 CAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPT 172
+VYNHYKR+ H +GN VEL KSN+LL+GPT
Sbjct: 89 VSVYNHYKRLRHPK--------------------ANGN--------VELSKSNILLIGPT 120
Query: 173 GSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIV 232
GSGKTLLA++LAR ++VPF + DAT LT+AGYVGED E ++ KLL DFDVE AQRGIV
Sbjct: 121 GSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIV 180
Query: 233 YIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPID 291
YIDE+DKI K+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP + I +D
Sbjct: 181 YIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPNQEFINVD 238
Query: 292 TKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGD 351
T +ILFICGGAF GLEK I +R + IGFGA V + +T L E V+ D
Sbjct: 239 TTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSKDENADIT------GLFEIVEPED 292
Query: 352 LVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDA 411
L+ +GLIPE IGR P++ +L+ L+ED LV +L EPKNAL +QY+ +F M NV+L F ++A
Sbjct: 293 LIKFGLIPELIGRLPVIATLAELDEDALVNILTEPKNALVKQYQTLFGMENVQLEFEEEA 352
Query: 412 LRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPG 471
LR IA++AM + TGARGLR+++E L + M+++P+ K V V++DK+ + P
Sbjct: 353 LRSIARQAMERKTGARGLRSIVERCLLDTMYQLPDLK----GVTKVVIDKDVIEKGKQP- 407
Query: 472 CGAKILHGDG 481
K+L DG
Sbjct: 408 ---KLLREDG 414
>gi|429768433|ref|ZP_19300589.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
diminuta 470-4]
gi|429189123|gb|EKY29970.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
diminuta 470-4]
Length = 422
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 197/375 (52%), Positives = 252/375 (67%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEI LD++VIGQ AKK AV+NHYKR+ H++
Sbjct: 63 VPTPKEIRDVLDDYVIGQAHAKKV---------------LSVAVHNHYKRLNHATKN--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN++L+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNIMLIGPTGSGKTLLAQTLARIIDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFI GGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTANILFIVGGAFAGLEKVI 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R SIGFGA V+ D T +L+ V+ DL+ +GLIPEFIGR P+L +
Sbjct: 258 SARGAGVSIGFGAKVKE-------IDERRTGEILKGVEPDDLMRFGLIPEFIGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+ +L EPKNAL +QYK++F M NV L FTDDAL +AKKA+ + TGARGLR
Sbjct: 311 LEDLDEAALITILTEPKNALVKQYKRLFEMENVALTFTDDALSAVAKKAITRKTGARGLR 370
Query: 431 ALLENILTEAMFEIP 445
++LE +L E MFE+P
Sbjct: 371 SILEGVLLETMFELP 385
>gi|339626864|ref|YP_004718507.1| ATP-dependent protease ATP-binding subunit ClpX [Sulfobacillus
acidophilus TPY]
gi|339284653|gb|AEJ38764.1| ATP-dependent protease ATP-binding subunit ClpX [Sulfobacillus
acidophilus TPY]
Length = 387
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 197/376 (52%), Positives = 255/376 (67%), Gaps = 53/376 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P P EI LD++V+GQERAKK+ AVYNHYKRI
Sbjct: 22 DIPKPTEIRAILDQYVVGQERAKKT---------------LSVAVYNHYKRIN------- 59
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
LGS V VEL+KSN+L++GPTGSGKTLLA+TLA+I+NVP
Sbjct: 60 -----------LGSKVDD----------VELQKSNILMLGPTGSGKTLLAQTLAKILNVP 98
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A+RGIVYIDEVDKI K+E+ +
Sbjct: 99 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAERGIVYIDEVDKIARKSENPSIT 158
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFI GGAF G+EK
Sbjct: 159 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTTNILFIVGGAFDGIEKI 216
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R +GF A ++ G +D + +L + DL+ +GLIPEF+GR PI V
Sbjct: 217 IKNRIGKRGLGFTAEIQ------GKSDVKI-GDVLAKIMPEDLLKFGLIPEFVGRLPITV 269
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+E+ LVQ+L EP+NAL +QY+KM M+NV+L F DDA+R +A++AM +NTGAR L
Sbjct: 270 TLDALDEEALVQILTEPRNALIKQYQKMLQMDNVELEFKDDAVRAVAREAMRRNTGARAL 329
Query: 430 RALLENILTEAMFEIP 445
RA++E+I+ + M++IP
Sbjct: 330 RAIIEDIMLDVMYDIP 345
>gi|167646808|ref|YP_001684471.1| ATP-dependent protease ATP-binding subunit ClpX [Caulobacter sp.
K31]
gi|399090708|ref|ZP_10754132.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Caulobacter
sp. AP07]
gi|189082487|sp|B0SZ62.1|CLPX_CAUSK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167349238|gb|ABZ71973.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Caulobacter
sp. K31]
gi|398027514|gb|EJL21063.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Caulobacter
sp. AP07]
Length = 420
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 197/377 (52%), Positives = 254/377 (67%), Gaps = 57/377 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EIC+ LD++VIGQ AKK AV+NHYKR+ H+S
Sbjct: 63 VPTPREICEVLDDYVIGQNHAKKV---------------LAVAVHNHYKRLNHASKN--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTG+GKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLVGPTGTGKTLLAQTLARIIDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIVLKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLE+ I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERII 257
Query: 311 SERRQDSSIGFGAPVR--ANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R Q SIGFGA V RTG +L V+ DL +GLIPEFIGR P++
Sbjct: 258 SARGQGKSIGFGAKVADPEERRTG---------EILRGVEPDDLQRFGLIPEFIGRLPVI 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E LV++L EPKNA +QY+++F M N+ L FT+DAL +AKKA+ + TGARG
Sbjct: 309 ATLEDLDEAALVKILTEPKNAFVKQYQRLFEMENIGLTFTEDALHGVAKKAILRKTGARG 368
Query: 429 LRALLENILTEAMFEIP 445
LR+++E IL E MFE+P
Sbjct: 369 LRSIMEGILLETMFELP 385
>gi|410666835|ref|YP_006919206.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermacetogenium phaeum DSM 12270]
gi|409104582|gb|AFV10707.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermacetogenium phaeum DSM 12270]
Length = 419
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 198/376 (52%), Positives = 257/376 (68%), Gaps = 54/376 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI + LD++VIGQE AKK IL AVYNHYKRI
Sbjct: 60 DIPKPKEIKEILDQYVIGQENAKK-----IL----------SVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
G+KS + VEL+KSN++++GPTG GKTLLA+TLA+I+NVP
Sbjct: 97 ------------NMGMKSDD--------VELQKSNIIMLGPTGCGKTLLAQTLAKILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A++GIVYIDE+DKI K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFICGGAF G++K
Sbjct: 197 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFEGIDKI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R +IGFGA + + G +L + DL+ YGLIPEF+GR PI+V
Sbjct: 255 IQNRIGKKTIGFGAELSRQEKDIG--------KILSQILPVDLLKYGLIPEFVGRVPIIV 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+E+ LV++L EPKNAL RQY+K+F ++ V L F +DALR +AK+A+ +NTGARGL
Sbjct: 307 TLDALDEEALVRILTEPKNALVRQYQKLFEIDGVTLEFKEDALRAVAKEAIRRNTGARGL 366
Query: 430 RALLENILTEAMFEIP 445
RA+LE+I+ M+E+P
Sbjct: 367 RAILEDIMLNVMYEVP 382
>gi|330503118|ref|YP_004379987.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
mendocina NK-01]
gi|328917404|gb|AEB58235.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
mendocina NK-01]
Length = 426
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 199/400 (49%), Positives = 257/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPAPKEISAILDQYVIGQERAKKV---------------LSVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + D+ VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 101 ------------------NQRDKKDD-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFAGLEKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGFGA VR+ + ++ L V+ DLV +GLIPEF+GR P++ +
Sbjct: 260 QARSTKGGIGFGAEVRSKQEGKKIGES------LREVEPDDLVKFGLIPEFVGRLPVIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E LVQ+L EPKNAL +QY K+F M V L F DAL+ +A+KA+ + TGARGLR
Sbjct: 314 LEELDEAALVQILTEPKNALTKQYAKLFEMEGVDLEFRSDALKSVAQKALERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE IL + M+EIP + V+ V++D+ + P
Sbjct: 374 SILEGILLDTMYEIPSQQ----DVSKVVIDESVIEGTSKP 409
>gi|381199611|ref|ZP_09906758.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingobium
yanoikuyae XLDN2-5]
Length = 422
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 200/400 (50%), Positives = 260/400 (65%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EIC LD++VIGQ+RAK+ AV+NHYKR+ H S E
Sbjct: 64 VPTPQEICDVLDDYVIGQKRAKRV---------------LSVAVHNHYKRLNHGSKPGE- 107
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTG GKTLLA+TLA+ +VPF
Sbjct: 108 ---------------------------VELAKSNILLVGPTGCGKTLLAQTLAKTFDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI KAE+ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIILKLLQASDYNVEKAQRGIVYIDEIDKISRKAENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 201 DVSGEGVQQALLKLMEGTTASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + SIGFGA V A + T LL + DL+ +GLIPEF+GR P++ +
Sbjct: 259 GDRLEAKSIGFGAHVAA-------PEERKTGELLRQSEPEDLLKFGLIPEFVGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ LV++L+EPKNAL +QY K+F M NV+L FTDDAL IAKKA+ + TGARGLR
Sbjct: 312 LEDLDVTALVKILVEPKNALVKQYGKLFDMENVELSFTDDALTAIAKKAIERKTGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE IL + MF++P + V V+V+K+ V P
Sbjct: 372 SILEAILLDTMFDLPSME----GVGEVVVNKDVVAGTKEP 407
>gi|329850565|ref|ZP_08265410.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Asticcacaulis
biprosthecum C19]
gi|328840880|gb|EGF90451.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Asticcacaulis
biprosthecum C19]
Length = 387
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 202/396 (51%), Positives = 267/396 (67%), Gaps = 61/396 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEI + LD++VIGQ +AKK AV+NHYKR+ H+
Sbjct: 30 VPTPKEIREVLDDYVIGQSQAKKV---------------LSVAVHNHYKRLNHA------ 68
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ GN VEL KSN++L+GPTGSGKTLLA+TLARI++VPF
Sbjct: 69 ---------------QKGND-------VELAKSNIMLIGPTGSGKTLLAQTLARIIDVPF 106
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 107 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 166
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 167 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 224
Query: 311 SERRQDSSIGFGAPVR--ANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + SSIGFGA V+ + RTG +L V+ DL+ +GLIPEFIGR P+L
Sbjct: 225 SGRGKGSSIGFGASVKDPEDRRTG---------EVLRDVEPDDLMKFGLIPEFIGRLPVL 275
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E LV++L EPKNAL +QY+++F M NV L+FT +AL +A+KA+ + TGARG
Sbjct: 276 ATLEDLDEVTLVKILTEPKNALIKQYQRLFEMENVSLNFTPEALMSVARKAIVRKTGARG 335
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
LR++LE IL + M+E+P + V V+++ E V
Sbjct: 336 LRSILEAILLDTMYELPTMQ----GVEEVVINGEVV 367
>gi|319789634|ref|YP_004151267.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermovibrio
ammonificans HB-1]
gi|317114136|gb|ADU96626.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermovibrio
ammonificans HB-1]
Length = 410
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 201/396 (50%), Positives = 258/396 (65%), Gaps = 58/396 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTPKEI + LD++VIGQE AKK AVYNHYKRI
Sbjct: 61 LPTPKEIKEFLDQYVIGQEEAKKV---------------LSVAVYNHYKRIMS------- 98
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G V VELEKSN+LL+GPTGSGKTLLA++LA++++VPF
Sbjct: 99 -----------GGSVDD----------VELEKSNILLIGPTGSGKTLLARSLAKLLDVPF 137
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L +L+ AAD+D+E A+RGI+YIDE+DKI K+E+ + R
Sbjct: 138 AIADATTLTEAGYVGEDVENILLRLIQAADYDIEKAERGIIYIDEIDKIARKSENPSITR 197
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV NVP P G RKHP I IDT +ILFICGGAFVGLE I
Sbjct: 198 DVSGEGVQQALLKILEGTVANVP-PQGG-RKHPHQQYIQIDTSNILFICGGAFVGLEDII 255
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+ R ++GF A V + LL+ V+ DLV +GLIPE IGR P++ +
Sbjct: 256 ARRIGKGAMGFTADVDKK--------KMERDELLKYVEPDDLVKFGLIPELIGRLPVIAT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L E+ LV+VL EPKNAL +QYKK+ M V+L FT++ALR IA++A+ + TGARGLR
Sbjct: 308 LKELKEEDLVRVLTEPKNALVKQYKKLLEMEGVELVFTEEALREIAREAIRRKTGARGLR 367
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
A++E ++T+ MFE+P K + V++D EAV +
Sbjct: 368 AIMEKLMTDVMFEVPTRK----DIKKVIIDAEAVKT 399
>gi|398382788|ref|ZP_10540869.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Sphingobium
sp. AP49]
gi|397726188|gb|EJK86629.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Sphingobium
sp. AP49]
Length = 422
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 204/416 (49%), Positives = 264/416 (63%), Gaps = 60/416 (14%)
Query: 56 ETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAV 115
ET+ G + G +PTP+EIC LD++VIGQ RAK+ AV
Sbjct: 51 ETKGGLVGKKDGG---VPTPQEICDVLDDYVIGQNRAKRV---------------LSVAV 92
Query: 116 YNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSG 175
+NHYKR+ H S E VEL KSN+LL+GPTG G
Sbjct: 93 HNHYKRLNHGSKPGE----------------------------VELAKSNILLVGPTGCG 124
Query: 176 KTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYID 235
KTLLA+TLA+ +VPFT+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYID
Sbjct: 125 KTLLAQTLAKTFDVPFTMADATTLTEAGYVGEDVENIILKLLQASDYNVEKAQRGIVYID 184
Query: 236 EVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKD 294
E+DKI KAE+ + RDVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT +
Sbjct: 185 EIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVP-PQGG-RKHPQQEFLQVDTTN 242
Query: 295 ILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVA 354
ILFICGGAF GLE+ I +R + SIGFGA V A + T LL + DL+
Sbjct: 243 ILFICGGAFAGLERIIGDRLEAKSIGFGAHVAA-------PEERKTGELLRQSEPEDLLK 295
Query: 355 YGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRL 414
+GLIPEF+GR P++ +L L+ LV++L+EPKNAL +QY K+F M NV L FTDDAL
Sbjct: 296 FGLIPEFVGRLPVIATLEDLDVAALVKILVEPKNALVKQYGKLFDMENVDLSFTDDALTA 355
Query: 415 IAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
IAKKA+ + TGARGLR++LE IL + MF++P + V V+VDK+ V P
Sbjct: 356 IAKKAIERKTGARGLRSILEAILLDTMFDLPSMQ----GVGEVVVDKDVVAGTKEP 407
>gi|380510629|ref|ZP_09854036.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
sacchari NCPPB 4393]
Length = 428
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 204/424 (48%), Positives = 273/424 (64%), Gaps = 62/424 (14%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E R+S LP P+EI + LD++VIGQ+RAK++
Sbjct: 48 NDIIREELEEKAQSARSS-----LPKPREILEVLDQYVIGQQRAKRT------------- 89
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKRI S QK NDE VEL KSN+LL
Sbjct: 90 --LAVAVYNHYKRI--ESRQK-------------------------NDE-VELAKSNILL 119
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DV+ AQ
Sbjct: 120 VGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAQ 179
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
+GIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ +
Sbjct: 180 QGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEF 237
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQDS-SIGFGAPVRANMRTGGLTDALVTSSLLES 346
+ +DTK+ILFICGGAF GL+K I +R D+ IGFGA V++ R + +L
Sbjct: 238 LQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSVERKREV------GKILAD 291
Query: 347 VDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLH 406
V+ DL+ +GLIPEF+GR P++ +L L+E L+++L EPKNA+ +Q+KK+F M V+L
Sbjct: 292 VEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFEMEGVELE 351
Query: 407 FTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
F DAL IAKKA+ + TGARGLR ++E++L + M+E+P +V+ V+VD+ +
Sbjct: 352 FRQDALLAIAKKALKRKTGARGLRTIVESVLLDTMYELP----SQENVSKVVVDESVIEH 407
Query: 467 VDAP 470
P
Sbjct: 408 KSEP 411
>gi|402771335|ref|YP_006590872.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylocystis
sp. SC2]
gi|401773355|emb|CCJ06221.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylocystis
sp. SC2]
Length = 421
Score = 360 bits (924), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 193/394 (48%), Positives = 264/394 (67%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EICK LD++VIGQ +AK+ AV+NHYKR+ H++
Sbjct: 63 IPTPREICKVLDDYVIGQSQAKRV---------------LSVAVHNHYKRLNHAT----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G+ VEL KSN+LL+GPTG GKT+LA+TLARI++VPF
Sbjct: 103 ---------------KHGD--------VELAKSNILLIGPTGVGKTMLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVY+DE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYVDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R +++SIGF A V++ D T + V DL+ +GLIPEF+GR P++ +
Sbjct: 258 SARGRNTSIGFAATVQS-------PDERRTGDIFRQVQPEDLLKFGLIPEFVGRLPVIAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L ++L EPKNAL +QY+++F M NV+L F DDAL +A+KA+ + TGARGLR
Sbjct: 311 LEDLDEDALKRILTEPKNALVKQYQRLFEMENVELTFQDDALSSVARKAIERRTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E IL + MF++P G V V++ E V
Sbjct: 371 SIMEGILLDTMFDLP----GLEGVEQVVIGPEVV 400
>gi|418939669|ref|ZP_13493059.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhizobium sp.
PDO1-076]
gi|375053610|gb|EHS49999.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhizobium sp.
PDO1-076]
Length = 425
Score = 360 bits (924), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 198/378 (52%), Positives = 261/378 (69%), Gaps = 57/378 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ++AKK IL AV+NHYKR+ H+S
Sbjct: 66 VPTPQDIIKILDEYVIGQKQAKK-----IL----------SVAVHNHYKRLSHAS----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G+ VEL KSN+LL+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KGGD--------VELAKSNILLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGFGA V + + R G +L ++ DLV +GLIPEFIGR P+L
Sbjct: 261 SARGEKTSIGFGATVTSPEDRRVG---------EVLRELEPEDLVKFGLIPEFIGRLPVL 311
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+ D L+Q+L EPKNAL +QY+++F M +V+L F +DALR IA KA+ + TGARG
Sbjct: 312 ATLEDLDADALIQILSEPKNALVKQYQRLFEMEDVELTFHEDALREIALKAITRKTGARG 371
Query: 429 LRALLENILTEAMFEIPE 446
LR+++E IL + MFE+PE
Sbjct: 372 LRSIMEKILLDTMFELPE 389
>gi|410636603|ref|ZP_11347196.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
lipolytica E3]
gi|410143885|dbj|GAC14401.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
lipolytica E3]
Length = 425
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 260/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LDE+VIGQE AKK AVYNHYKR+
Sbjct: 65 LPKPKEIHAHLDEYVIGQEHAKKV---------------LSVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+SG+ + E +EL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 ---------------RSGDVH----EGIELSKSNILLIGPTGSGKTLLAETLARLLDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 202 DVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 259
Query: 311 SERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R S IGFGA V+ D ++ L + V+ DLV YGLIPEFIGR P+L
Sbjct: 260 EQRAAVGSGIGFGATVKNK------DDKKASNELFKKVEPEDLVKYGLIPEFIGRLPVLT 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SL L+ED L+Q+L EPKNAL +QY +F+M + +L F DDAL IA KAM + TGARGL
Sbjct: 314 SLEELSEDALIQILQEPKNALTKQYGALFAMEDTELEFRDDALHAIANKAMQRKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E +L E M+++P + V+ V++D+ + P
Sbjct: 374 RSIVEGVLLETMYDLP----SMTGVSKVVIDETVIKGESNP 410
>gi|258646881|ref|ZP_05734350.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dialister
invisus DSM 15470]
gi|260404320|gb|EEW97867.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dialister
invisus DSM 15470]
Length = 412
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 270/401 (67%), Gaps = 56/401 (13%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N +E E +T ++ + + +LPTP++I + +D++VI Q+ AK
Sbjct: 42 NILEEEMKT---SKKKKGLPDFELPTPEKIKEYMDQYVIEQDDAK--------------- 83
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
+ AVYNHYKRI + ++D+ VEL+KSN+++
Sbjct: 84 VALAVAVYNHYKRIRYE----------------------------KDDDGVELQKSNIIM 115
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR +NVPF I+DAT LT+AGYVGED E++L +L+ AAD+D+E AQ
Sbjct: 116 LGPTGSGKTLLAQTLARFLNVPFAISDATTLTEAGYVGEDVENILLRLIQAADYDLERAQ 175
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
RGIVYIDE+DKI K+E+ + RDVSGEGVQQALLK+LEGTV +VP P G RKHP +
Sbjct: 176 RGIVYIDEIDKIAKKSENPSITRDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPNQEM 233
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESV 347
I +DT +ILFICGGAF G++K I+ R S++GFGA ++ D + +L++V
Sbjct: 234 IQLDTSNILFICGGAFAGIDKVIARRTTRSTMGFGADIKK-------ADEKDIAEVLQNV 286
Query: 348 DSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHF 407
+ DL+ +GLIPEFIGR P++V+L L E+ L+++L EPKNAL RQY+K+ M+NV+L F
Sbjct: 287 EPEDLLKFGLIPEFIGRLPVIVALHPLKEEALIRILSEPKNALIRQYQKLLGMDNVELVF 346
Query: 408 TDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETK 448
A+R IAKKA+ +NTGARGLRA++E I+T+ M+EIP K
Sbjct: 347 EGKAVRAIAKKAIERNTGARGLRAIIEKIMTKVMYEIPGMK 387
>gi|114771110|ref|ZP_01448550.1| ATP-dependent protease ATP-binding subunit [Rhodobacterales
bacterium HTCC2255]
gi|114548392|gb|EAU51278.1| ATP-dependent protease ATP-binding subunit [alpha proteobacterium
HTCC2255]
Length = 420
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 190/378 (50%), Positives = 257/378 (67%), Gaps = 53/378 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP +IC+ LD++VIGQ+ AK+ AV+NHYKR+ HS
Sbjct: 63 VPTPAKICQILDDYVIGQDVAKRV---------------LSVAVHNHYKRLDHS------ 101
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ +E +EL KSN+LL+GPTG GKTLLA+TLAR+++VPF
Sbjct: 102 ----------------------DTNEEIELSKSNILLVGPTGCGKTLLAQTLARVIDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A++++VE A+RGIVYIDEVDKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQASEYNVERAERGIVYIDEVDKITRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLKVDTTNILFICGGAFAGLDKII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S+R Q S IGFGA V+ G + ++ DL+ +GLIPEF+GR P+L +
Sbjct: 258 SQRGQGSGIGFGADVKDEESRG-------IGEIFSEMEPEDLLKFGLIPEFVGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L+ED LV +L EPKNAL +QY+ +FS+ N L FTD+AL+ IAK+A+A+ TGARGLR
Sbjct: 311 LTDLDEDALVTILSEPKNALVKQYQTLFSLENTNLTFTDEALKAIAKRAIARKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETK 448
++LE+IL MFE+P K
Sbjct: 371 SILEDILLNTMFELPGLK 388
>gi|312898488|ref|ZP_07757878.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Megasphaera
micronuciformis F0359]
gi|310620407|gb|EFQ03977.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Megasphaera
micronuciformis F0359]
Length = 417
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 262/401 (65%), Gaps = 55/401 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTP EI K LD++VIGQE AKK+ AVYNHYKR+
Sbjct: 62 ELPTPHEIKKNLDDYVIGQEAAKKT---------------LSVAVYNHYKRL-------- 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N N + D+ VEL+KSN++++GPTGSGKTLLA+TLA+ ++VP
Sbjct: 99 -----------------QSNSNKDKDD-VELQKSNIVMVGPTGSGKTLLAQTLAKFLDVP 140
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E+ L KL+ AADFD+ A+RGI+YIDE+DKI K+E+ +
Sbjct: 141 FAIADATSLTEAGYVGEDVENCLLKLIQAADFDIAKAERGIIYIDEIDKIARKSENPSIT 200
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT NVP P G RKHP + + IDT +ILFICGGAF G++KT
Sbjct: 201 RDVSGEGVQQALLKILEGTEANVP-PQGG-RKHPHQEMLQIDTTNILFICGGAFDGIDKT 258
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I RR + ++GFGA + LL+ + DL +GLIPE IGR P+LV
Sbjct: 259 IRSRRTEKNMGFGADIHKKNEES-------VEELLKEIIPTDLQKFGLIPELIGRLPVLV 311
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ ++ +L EPKNAL +QY+KM M++VKL FTDDAL+ IA++A+ + TGARGL
Sbjct: 312 TLNPLDEEAMIHILTEPKNALVKQYQKMLGMDDVKLTFTDDALKAIAEEALRRKTGARGL 371
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E I+ + MF+ P K V +V KE+V AP
Sbjct: 372 RSIIERIMLDVMFDAPSRK----DVEECIVTKESVVDGKAP 408
>gi|296536160|ref|ZP_06898288.1| ATP-dependent Clp protease ATP-binding subunit [Roseomonas
cervicalis ATCC 49957]
gi|296263531|gb|EFH10028.1| ATP-dependent Clp protease ATP-binding subunit [Roseomonas
cervicalis ATCC 49957]
Length = 418
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 193/375 (51%), Positives = 254/375 (67%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EICK LD++VIGQE AKK AV+NHYKR+ H
Sbjct: 61 VPTPREICKVLDDYVIGQEHAKKV---------------LSVAVHNHYKRLAH------- 98
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G K+G VE+ KSN++L+GPTGSGKTLLA+TLARI++VPF
Sbjct: 99 -------------GGKTGE--------VEIAKSNIMLVGPTGSGKTLLAQTLARILDVPF 137
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 138 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 197
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +V P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 198 DVSGEGVQQALLKIMEGTVASV--PPQGGRKHPQQEFLQVDTSNILFICGGAFAGLEKII 255
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+ R + S IG+GA VR D T +L V+ DL+ +GLIPEFIGR P++ +
Sbjct: 256 AGRGKGSGIGYGAEVRG-------PDERRTGQILREVEPEDLLKFGLIPEFIGRLPVVAT 308
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E LV++L +PKNAL +QY+++F M KL FTDDAL+ +A +A+ + TGARGLR
Sbjct: 309 LDDLDEKALVEILTKPKNALVKQYQRLFEMEATKLTFTDDALKSVANRAIQRKTGARGLR 368
Query: 431 ALLENILTEAMFEIP 445
+++E IL MF++P
Sbjct: 369 SIMEGILLGTMFDLP 383
>gi|407700788|ref|YP_006825575.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'Black Sea 11']
gi|407249935|gb|AFT79120.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'Black Sea 11']
Length = 424
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 264/401 (65%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQE AKK AVYNHYKR+
Sbjct: 65 LPKPSEIHAHLDDYVIGQEHAKKV---------------LSVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ + E VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 ---------------RNGDVH----EGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 259
Query: 311 SERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R Q D+ IGFGA V++ + + S L + V+ DLV YGLIPEFIGR P++
Sbjct: 260 EQRAQKDTGIGFGATVKSKDNSKKI------SELFKQVEPEDLVKYGLIPEFIGRLPVVT 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SL LNE+ L+Q+L EPKNA+ +QY +FSM +V+L F DDAL IAKKAM + TGARGL
Sbjct: 314 SLEELNEEALIQILREPKNAITKQYGALFSMEDVELEFRDDALNAIAKKAMDRKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E +L + M+++P +V+ V++D+ + P
Sbjct: 374 RSIVEAVLLDTMYDLP----SMENVSKVVIDETVIRGESKP 410
>gi|406597482|ref|YP_006748612.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii ATCC 27126]
gi|407684496|ref|YP_006799670.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'English Channel 673']
gi|407688424|ref|YP_006803597.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'Balearic Sea AD45']
gi|406374803|gb|AFS38058.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii ATCC 27126]
gi|407246107|gb|AFT75293.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'English Channel 673']
gi|407291804|gb|AFT96116.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'Balearic Sea AD45']
Length = 424
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 263/401 (65%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQE AKK AVYNHYKR+
Sbjct: 65 LPKPSEIHAHLDDYVIGQEHAKKV---------------LSVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ + E VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 ---------------RNGDVH----EGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 259
Query: 311 SERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R Q D+ IGFGA V++ + + S L + V+ DLV YGLIPEFIGR P++
Sbjct: 260 EQRAQKDTGIGFGATVKSKDNSKQI------SELFKQVEPEDLVKYGLIPEFIGRLPVVT 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SL LNE+ L+Q+L EPKNA+ +QY +FSM +V+L F DDAL IAKKAM + TGARGL
Sbjct: 314 SLEELNEEALIQILREPKNAITKQYGALFSMEDVELEFRDDALNAIAKKAMDRKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E +L + M+++P V+ V++D+ + P
Sbjct: 374 RSIVEAVLLDTMYDLP----SMEDVSKVVIDETVIRGESKP 410
>gi|349699183|ref|ZP_08900812.1| Clp protease ATP-binding subunit [Gluconacetobacter europaeus LMG
18494]
Length = 419
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 194/375 (51%), Positives = 260/375 (69%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EICK LD++VIGQ AKK AV+NHYKR+ H+ QK
Sbjct: 62 VPTPREICKILDDYVIGQGHAKKV---------------LSVAVHNHYKRLAHA--QKN- 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VE+ KSN++L+GPTGSGKTLLA+TLARI++VPF
Sbjct: 104 -----------------------ND--VEIAKSNIMLIGPTGSGKTLLAQTLARILDVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 139 TMADATTLTEAGYVGEDVENIILKLLQAADYNVEKAQRGIVYIDEIDKISRKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ++LFICGGAF GL+K I
Sbjct: 199 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNMLFICGGAFAGLDKII 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + S IGFGA V++ D ++L V+ DL+ +GLIPEFIGR P++ +
Sbjct: 257 SARGKGSGIGFGADVQS-------PDERRMGAVLRDVEPEDLLKFGLIPEFIGRLPVVAT 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+++L +PKNAL +QY ++F M +V+L FT+DALR +A++A+A+ TGARGLR
Sbjct: 310 LEDLDEAALIEILTKPKNALVKQYARLFQMEDVQLTFTEDALRQVAQRAIARRTGARGLR 369
Query: 431 ALLENILTEAMFEIP 445
A+LE+IL MFE+P
Sbjct: 370 AILESILLSTMFELP 384
>gi|160933530|ref|ZP_02080918.1| hypothetical protein CLOLEP_02376 [Clostridium leptum DSM 753]
gi|156867407|gb|EDO60779.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
leptum DSM 753]
Length = 439
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 203/429 (47%), Positives = 274/429 (63%), Gaps = 63/429 (14%)
Query: 51 IESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIG 110
+E E++ + + N ++ L P+EI LDE+VIGQE+AK I
Sbjct: 47 LEDEADFQERSANYHNNDETVLLKPEEIKAKLDEYVIGQEKAK---------------IA 91
Query: 111 ACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMG 170
AVYNHYKRIY S + VE+ KSNVLL+G
Sbjct: 92 LSVAVYNHYKRIYFGS------------------------------DDVEINKSNVLLLG 121
Query: 171 PTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRG 230
PTG GKTLLA+TLA+I++VPF I DAT LT+AGYVGED E++L +L+ AADFDVE A+RG
Sbjct: 122 PTGVGKTLLAQTLAKILDVPFAIADATTLTEAGYVGEDVENILLRLIQAADFDVERAERG 181
Query: 231 IVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIP 289
I+Y+DE+DKI K+E+ + RDVSGEGVQQALLK+LEGTV NVP P G RKHP+ + I
Sbjct: 182 IIYVDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVSNVP-PQGG-RKHPQQEFIQ 239
Query: 290 IDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDS 349
IDT +ILFICGGAF GLEK + +R SS+GFGA VR+ L T+ + V
Sbjct: 240 IDTSNILFICGGAFDGLEKVVEKRTGSSSLGFGAQVRSKKE-------LDTTKWMGEVVP 292
Query: 350 GDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTD 409
DLV YGLIPE +GR P++ +L L+++ LV++L EPKN++ +QYKK+F+++ V+L F
Sbjct: 293 HDLVKYGLIPELVGRLPVITALDGLDQEALVRILTEPKNSILKQYKKLFALDKVELDFEK 352
Query: 410 DALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDA 469
AL +A+KA+ + TGARGLR+++E LT+ M+++P SV V+VD E V +
Sbjct: 353 SALEAVAQKAIDRRTGARGLRSIMEETLTDLMYKVP----SDYSVEKVIVDGETVKN--- 405
Query: 470 PGCGAKILH 478
G AK++H
Sbjct: 406 -GREAKLIH 413
>gi|407696209|ref|YP_006820997.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Alcanivorax
dieselolei B5]
gi|407253547|gb|AFT70654.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Alcanivorax
dieselolei B5]
Length = 426
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 197/398 (49%), Positives = 259/398 (65%), Gaps = 55/398 (13%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E+G+ + G LP P EI LDE+VIGQERAKK
Sbjct: 46 NDIIREEVQEDGDNS----GQESLPKPDEIKNTLDEYVIGQERAKKV------------- 88
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKR+ N + + VEL KSN+LL
Sbjct: 89 --LSVAVYNHYKRL---------------------------NSTLRGRDDVELGKSNILL 119
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ
Sbjct: 120 IGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQ 179
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
+GIVYIDE+DKI K+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ +
Sbjct: 180 KGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEF 237
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESV 347
+ +DT +ILFICGGAF GL+K I +R + IGF A V++ + + LV V
Sbjct: 238 LQVDTSNILFICGGAFAGLDKVIRDRSEKGGIGFSAEVKSKEGDRNVGETLV------GV 291
Query: 348 DSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHF 407
+ DLV YGLIPEFIGR P++ +L L+ED LVQ+L EP+NAL +QY ++F M V+L F
Sbjct: 292 EPEDLVKYGLIPEFIGRLPVVATLEELSEDALVQILTEPRNALTKQYMRLFEMEGVELDF 351
Query: 408 TDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP 445
+DALR +A+KAM + +GARGLR++LE++L + M+++P
Sbjct: 352 REDALRSVARKAMERKSGARGLRSILESVLLDTMYQVP 389
>gi|386717298|ref|YP_006183624.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Stenotrophomonas maltophilia D457]
gi|384076860|emb|CCH11445.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Stenotrophomonas maltophilia D457]
Length = 429
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 203/424 (47%), Positives = 273/424 (64%), Gaps = 62/424 (14%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E R+S LP P+EI + LD++VIGQ RAK++
Sbjct: 48 NDIIREELEEKAQSARSS-----LPKPREILEVLDQYVIGQNRAKRT------------- 89
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKRI S QK ND+ VEL KSN+LL
Sbjct: 90 --LAVAVYNHYKRI--ESRQK-------------------------NDD-VELAKSNILL 119
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFT+ DAT LT+AGYVGED E+++ KLL D+DVE AQ
Sbjct: 120 VGPTGSGKTLLAETLARLLNVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQ 179
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
+GIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ +
Sbjct: 180 QGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEF 237
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLES 346
+ +DTK+ILFICGGAF GL+K I R D SIGFGA V+++ R + +L
Sbjct: 238 LQVDTKNILFICGGAFAGLDKVIQARSTDVGSIGFGAKVKSSERKQEV------GKVLAE 291
Query: 347 VDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLH 406
V+ DL+ +GLIPEF+GR P++ +L L+E L+++L EPKNA+ +Q+KK+F M NV+L
Sbjct: 292 VEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFEMENVELE 351
Query: 407 FTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
F DAL IA+KA+ + TGARGLR ++E++L + M+++P +V+ V+VD+ +
Sbjct: 352 FRPDALSAIARKALKRKTGARGLRTIVESVLLDTMYDLP----SQENVSKVVVDESVIEH 407
Query: 467 VDAP 470
P
Sbjct: 408 KSEP 411
>gi|147677140|ref|YP_001211355.1| ATP-dependent protease ATP-binding subunit ClpX [Pelotomaculum
thermopropionicum SI]
gi|146273237|dbj|BAF58986.1| ATP-dependent protease Clp, ATPase subunit [Pelotomaculum
thermopropionicum SI]
Length = 427
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 265/401 (66%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI + LD++VIGQE AKKS AVYNHYKRI
Sbjct: 68 DIPKPKEIKEILDQYVIGQESAKKS---------------LAVAVYNHYKRIN------- 105
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
LG + VEL+KSN++++GPTGSGKTLLA+TLAR++NVP
Sbjct: 106 -----------LGGKIDD----------VELQKSNIVMLGPTGSGKTLLAQTLARLLNVP 144
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A++GIVYIDE+DKI K+E+ +
Sbjct: 145 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSIT 204
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I +DT +ILFICGGAF G+EK
Sbjct: 205 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQLDTTNILFICGGAFDGIEKI 262
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R ++GFGA ++A L +L + DL+ YGLIPEF+GR PI+V
Sbjct: 263 IMNRIGKKAMGFGAEIKARKE-------LKIGEILSKILPEDLLKYGLIPEFVGRLPIIV 315
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+E+ L+++L EP+NAL +QY+K+F ++ V L FT DAL+ +A++A+ +NTGARGL
Sbjct: 316 TLDALDEEALIRILTEPRNALVKQYEKLFELDGVTLEFTQDALKAVAEEALKRNTGARGL 375
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA+LE ++ + M++IP S V +V +E + + P
Sbjct: 376 RAILEEVMLDVMYDIP----SRSDVAKCIVTRETILRREPP 412
>gi|117921101|ref|YP_870293.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella sp.
ANA-3]
gi|166215205|sp|A0KYL8.1|CLPX_SHESA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|117613433|gb|ABK48887.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
sp. ANA-3]
Length = 426
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 206/404 (50%), Positives = 259/404 (64%), Gaps = 57/404 (14%)
Query: 69 NIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQ 128
N LPTP E+ LD++VIGQ+RAKK AVYNHYKR+ +SS
Sbjct: 62 NDKLPTPHELRAHLDDYVIGQDRAKKV---------------LSVAVYNHYKRLRNSS-- 104
Query: 129 KELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVN 188
K G VEL KSN+LL+GPTGSGKTLLA+TLAR +N
Sbjct: 105 -----------------PKDG---------VELGKSNILLIGPTGSGKTLLAETLARSLN 138
Query: 189 VPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRN 247
VPFT+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ +
Sbjct: 139 VPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPS 198
Query: 248 NGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLE 307
RDVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GLE
Sbjct: 199 ITRDVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLE 256
Query: 308 KTISERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFP 366
K I +R S IGFGA V+ G D S L V+ DLV YGLIPEFIGR P
Sbjct: 257 KVIEQRAHVGSGIGFGAQVK------GEKDKATISQTLSQVEPEDLVKYGLIPEFIGRLP 310
Query: 367 ILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGA 426
++ +L+ L+E+ LVQ+L EPKNAL +QY +F M V+L F +DAL+ IA KAM++ TGA
Sbjct: 311 VVATLTELDEEALVQILSEPKNALTKQYNALFEMEGVELEFREDALKAIAHKAMSRKTGA 370
Query: 427 RGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RGLR+++E IL + M++IP + V +VD+ V AP
Sbjct: 371 RGLRSIVEGILLDTMYDIPSIE----GVVKAVVDESVVNGESAP 410
>gi|422674864|ref|ZP_16734214.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aceris str. M302273]
gi|330972588|gb|EGH72654.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aceris str. M302273]
Length = 427
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ +ND+ VEL KSN+LL+GPTGSGKTLLAKTLAR++NVPF
Sbjct: 104 --------------------DKKNDD-VELGKSNILLIGPTGSGKTLLAKTLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTRGGIGFNAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +A++A+ + TGARGLR
Sbjct: 315 LDELDEAALIQILTEPKNALTKQYAKLFEMEGVDLEFRTDALKSVARRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSDVSKVVIDESVIDGTSKP 410
>gi|220927144|ref|YP_002502446.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
nodulans ORS 2060]
gi|254763854|sp|B8IN27.1|CLPX_METNO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|219951751|gb|ACL62143.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacterium nodulans ORS 2060]
Length = 423
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 202/410 (49%), Positives = 271/410 (66%), Gaps = 61/410 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEI + LD++VIGQ+ AKK AV+NHYKR+ H++
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKV---------------LSVAVHNHYKRLAHAAKH--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLE+ I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+A D T + +V+ DL+ +GLIPEF+GR P+L +
Sbjct: 258 SARGKGTSIGFGATVQA-------PDDRRTGEIFRNVEPEDLLKFGLIPEFVGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L ++L EPKNAL +QY+++F M NV L F ++AL L+A+KA+ + TGARGLR
Sbjct: 311 LEDLDEIALKRILQEPKNALVKQYQRLFEMENVDLTFQEEALTLVARKAIERKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGD 480
++LE+IL E M+++P G SV V++ E V P +HGD
Sbjct: 371 SILESILLETMYDLP----GLDSVEQVVIGPEVVDGKARP----LYIHGD 412
>gi|28211966|ref|NP_782910.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium tetani
E88]
gi|46576541|sp|Q891J8.1|CLPX_CLOTE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|28204409|gb|AAO36847.1| ATP-dependent clp protease ATP-binding subunit clpX [Clostridium
tetani E88]
Length = 431
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 195/396 (49%), Positives = 266/396 (67%), Gaps = 57/396 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKRI
Sbjct: 62 LPKPSEIKSYLDDYVIGQDDAKKA---------------LSVAVYNHYKRI--------- 97
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N N ND+ VEL+KSN+LL+GPTGSGKTLLA+T+A+ +NVPF
Sbjct: 98 ------------------NLNNVNDD-VELQKSNILLLGPTGSGKTLLAQTMAKFLNVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ AD+D+E A+RGI+YIDE+DKI K+E+ + R
Sbjct: 139 AIADATTLTEAGYVGEDVENILLKLIQNADYDIEKAERGIIYIDEIDKIARKSENPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQ+LLK+LEGT+ +VP P G RKHP + I ++T +ILFICGGAF G++K I
Sbjct: 199 DVSGEGVQQSLLKILEGTIASVP-PQGG-RKHPHQEFIQLNTTNILFICGGAFDGVDKLI 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R ++SS+GFGA +++ LL+ + DL+ +GLIPEFIGR PI V+
Sbjct: 257 ERRTRNSSLGFGADIKSKRDEN-------VGELLKKIMPEDLLKFGLIPEFIGRLPITVT 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
LSAL+ D LV++L EPKNAL +QYKK+F M+NV L F ++AL+ IA++A+ ++TGARGLR
Sbjct: 310 LSALDRDALVEILTEPKNALVKQYKKLFEMDNVHLEFKEEALKAIAEEAIRRSTGARGLR 369
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
+++E I+ + MFEIP S++ V++++E V +
Sbjct: 370 SIIEEIMKDIMFEIP----SDESISKVIINEETVSN 401
>gi|319637747|ref|ZP_07992513.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
mucosa C102]
gi|317400902|gb|EFV81557.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
mucosa C102]
Length = 421
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 207/446 (46%), Positives = 273/446 (61%), Gaps = 71/446 (15%)
Query: 40 GFIRKDGESNGIESE---SETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSH 96
G + +D E IE+E ++ EN + LPTP EI L++ VIGQE AKK+
Sbjct: 38 GIMLQDNEFGEIENELVKAKEENAEKK--------LPTPAEIVANLNDHVIGQEHAKKA- 88
Query: 97 IFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEND 156
+VYNHYKR+ H + +
Sbjct: 89 --------------LAVSVYNHYKRLRHPKAEGK-------------------------- 108
Query: 157 EIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKL 216
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPF + DAT LT+AGYVGED E ++ KL
Sbjct: 109 --VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKL 166
Query: 217 LAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIP 275
L DFDVE AQRGIVYIDE+DKI K+++ + RDVSGEGVQQALLK++EGTV +VP P
Sbjct: 167 LGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP-P 225
Query: 276 DNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLT 335
G RKHP + I +DT +ILFICGGAF GLEK I +R + IGFGA V + +
Sbjct: 226 QGG-RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSKDENADI- 283
Query: 336 DALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYK 395
S+L E+V+ DL+ +GLIPE IGR P++ +L+ L+ED LV +L EPKNAL +QY+
Sbjct: 284 -----SALFETVEPEDLIKFGLIPELIGRLPMIATLAELDEDALVNILTEPKNALVKQYQ 338
Query: 396 KMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVN 455
+F M +V L F +DALR IAK AM + TGARGLR+++E L + M+ +P+ K V
Sbjct: 339 TLFEMEDVSLEFEEDALRSIAKLAMERKTGARGLRSIVERCLLDTMYALPDLK----DVA 394
Query: 456 AVLVDKEAVGSVDAPGCGAKILHGDG 481
V+++KE V D P K+ DG
Sbjct: 395 KVVINKEVVEKGDQP----KLFRADG 416
>gi|304316360|ref|YP_003851505.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|433654492|ref|YP_007298200.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermoanaerobacterium thermosaccharolyticum M0795]
gi|302777862|gb|ADL68421.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|433292681|gb|AGB18503.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 424
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 197/387 (50%), Positives = 262/387 (67%), Gaps = 58/387 (14%)
Query: 67 EGNID-----LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKR 121
E NID LP PKEI + LD++VIGQ++AKK+ AVYNHYKR
Sbjct: 50 EENIDVEIGELPKPKEIKEFLDQYVIGQDKAKKA---------------LAVAVYNHYKR 94
Query: 122 IYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAK 181
I N V++D+ VEL+KSN+L++GPTGSGKTLLA+
Sbjct: 95 I---------------------------NSRVKSDD-VELQKSNILMLGPTGSGKTLLAQ 126
Query: 182 TLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV 241
TLAR++NVPF I DAT+LT+AGYVGED E++L KL+ AAD+D+E A+RGIVYIDEVDKI
Sbjct: 127 TLARMLNVPFAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAERGIVYIDEVDKIA 186
Query: 242 -KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICG 300
K+E+ + RDVSGEGVQQALLK+LEGTV NVP P G RKHP + I IDT +ILFI G
Sbjct: 187 RKSENPSITRDVSGEGVQQALLKILEGTVANVP-PQGG-RKHPHQEFIQIDTTNILFIVG 244
Query: 301 GAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPE 360
GAF G+EK I R S+GFG+ V++ +L+++ DL+ +GLIPE
Sbjct: 245 GAFDGIEKIIESRIGKKSLGFGSEVQSKQEKK-------IGEILKNIMPEDLLKFGLIPE 297
Query: 361 FIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAM 420
FIGR PI+V+L +L++D L+++L EPKNAL +QY+K+F ++ VKL F AL +IA+KA+
Sbjct: 298 FIGRLPIVVTLDSLDKDALIRILTEPKNALTKQYEKLFELDGVKLEFDKKALSVIAQKAI 357
Query: 421 AKNTGARGLRALLENILTEAMFEIPET 447
+ TGARGLR++LE ++ + M+EIP +
Sbjct: 358 DRKTGARGLRSILEELMLDVMYEIPSS 384
>gi|113970829|ref|YP_734622.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella sp.
MR-4]
gi|114048054|ref|YP_738604.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella sp.
MR-7]
gi|123131263|sp|Q0HTK8.1|CLPX_SHESR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123324884|sp|Q0HHA2.1|CLPX_SHESM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|113885513|gb|ABI39565.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella sp.
MR-4]
gi|113889496|gb|ABI43547.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella sp.
MR-7]
Length = 426
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 206/404 (50%), Positives = 259/404 (64%), Gaps = 57/404 (14%)
Query: 69 NIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQ 128
N LPTP E+ LD++VIGQ+RAKK AVYNHYKR+ +SS
Sbjct: 62 NDKLPTPHELRAHLDDYVIGQDRAKKV---------------LSVAVYNHYKRLRNSS-- 104
Query: 129 KELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVN 188
K G VEL KSN+LL+GPTGSGKTLLA+TLAR +N
Sbjct: 105 -----------------PKDG---------VELGKSNILLIGPTGSGKTLLAETLARSLN 138
Query: 189 VPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRN 247
VPFT+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ +
Sbjct: 139 VPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPS 198
Query: 248 NGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLE 307
RDVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GLE
Sbjct: 199 ITRDVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLE 256
Query: 308 KTISERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFP 366
K I +R S IGFGA V+ G D S L V+ DLV YGLIPEFIGR P
Sbjct: 257 KVIEQRAHVGSGIGFGAQVK------GEKDKATISQTLSQVEPEDLVKYGLIPEFIGRLP 310
Query: 367 ILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGA 426
++ +L+ L+E+ LVQ+L EPKNAL +QY +F M V+L F +DAL+ IA KAM++ TGA
Sbjct: 311 VVATLTELDEEALVQILSEPKNALTKQYNALFEMEGVELEFREDALKAIAHKAMSRKTGA 370
Query: 427 RGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RGLR+++E IL + M++IP + V +VD+ V AP
Sbjct: 371 RGLRSIVEGILLDTMYDIPSIE----GVVKAVVDESVVNGESAP 410
>gi|339021746|ref|ZP_08645738.1| Clp protease ATP-binding subunit ClpX [Acetobacter tropicalis NBRC
101654]
gi|338751242|dbj|GAA09042.1| Clp protease ATP-binding subunit ClpX [Acetobacter tropicalis NBRC
101654]
Length = 421
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 196/400 (49%), Positives = 267/400 (66%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AKK AV+NHYKR+ S+
Sbjct: 62 VPTPKEICKVLDDYVIGQFEAKKV---------------LSVAVHNHYKRLTQSAKN--- 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VE+ KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 104 -----------------------ND--VEIAKSNILLIGPTGSGKTLLAQTLARILDVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 139 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ++LFICGGAF GL+K I
Sbjct: 199 DVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNMLFICGGAFAGLDKII 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+ R + + IGFGA VR+ D +L V+ DL+ +GLIPEFIGR P+L +
Sbjct: 257 AARGKGTGIGFGADVRS-------PDDRRMGEILHDVEPEDLMKFGLIPEFIGRLPVLAT 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+++L EPKNAL +QY+++F M +V+L FTDDAL+ IA +A+ + TGARGLR
Sbjct: 310 LGDLDEAALIRILTEPKNALVKQYQRLFQMEDVQLSFTDDALKAIADRAIKRKTGARGLR 369
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+++E+IL MF++P G +V V+V+++ +P
Sbjct: 370 SIMESILMSTMFDLP----GLDNVEEVVVNRDVAEEKTSP 405
>gi|110633523|ref|YP_673731.1| ATP-dependent protease ATP-binding subunit ClpX [Chelativorans sp.
BNC1]
gi|123162493|sp|Q11J59.1|CLPX_MESSB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|110284507|gb|ABG62566.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Chelativorans
sp. BNC1]
Length = 424
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 197/402 (49%), Positives = 264/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI + LD++VIGQ AK+ AV+NHYKR+ H+ +
Sbjct: 65 VPTPQEIMEVLDDYVIGQTYAKRV---------------LSVAVHNHYKRLAHAGKNAD- 108
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 109 ---------------------------VELSKSNILLIGPTGCGKTLLAQTLARIIDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTSSILFICGGAFAGLEKII 259
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S+R + +SIGFGA V + + R G LL V+ DL+ +GLIPEF+GR PIL
Sbjct: 260 SDRGKKTSIGFGASVSSPEDRRAG---------ELLRQVEPEDLLKFGLIPEFVGRLPIL 310
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E+ LVQ+L EPKNAL +QY+++F M NV+L F ++ALR IA+KA+ + TGARG
Sbjct: 311 ATLEDLDEEALVQILTEPKNALVKQYQRLFEMENVELTFHENALRAIARKAIERKTGARG 370
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E IL + MFE+P V V++ ++ V P
Sbjct: 371 LRSIMEAILLDTMFELP----ALEGVQEVVISEDVVAGSARP 408
>gi|167040914|ref|YP_001663899.1| ATP-dependent protease ATP-binding subunit ClpX [Thermoanaerobacter
sp. X514]
gi|300914950|ref|ZP_07132266.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter sp. X561]
gi|307723816|ref|YP_003903567.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter sp. X513]
gi|238687634|sp|B0K532.1|CLPX_THEPX RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166855154|gb|ABY93563.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter sp. X514]
gi|300889885|gb|EFK85031.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter sp. X561]
gi|307580877|gb|ADN54276.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter sp. X513]
Length = 424
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 198/391 (50%), Positives = 259/391 (66%), Gaps = 58/391 (14%)
Query: 63 NRNSEGNID-----LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYN 117
N E +ID LP PKEI + LD++VIGQE+AKK+ AVYN
Sbjct: 46 NEEFEEDIDMGIGELPKPKEIKEFLDQYVIGQEKAKKA---------------LAVAVYN 90
Query: 118 HYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKT 177
HYKRI N ++ D+ VEL+KSN+LL+GPTGSGKT
Sbjct: 91 HYKRI---------------------------NSRIKPDD-VELQKSNILLLGPTGSGKT 122
Query: 178 LLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEV 237
LLA+TLA+++NVPF I DAT+LT+AGYVGED E++L KL+ AAD+D+E A++GI+YIDE+
Sbjct: 123 LLAQTLAKLLNVPFAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAEKGIIYIDEI 182
Query: 238 DKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDIL 296
DKI K+E+ + RDVSGEGVQQALLK+LEGT+ NVP P G RKHP + I IDT +IL
Sbjct: 183 DKIARKSENPSITRDVSGEGVQQALLKILEGTIANVP-PQGG-RKHPHQEFIQIDTTNIL 240
Query: 297 FICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYG 356
FICGGAF G+EK I R S+GFGA V++ S +L + DL+ +G
Sbjct: 241 FICGGAFEGIEKIIESRIGKKSLGFGAEVQSRKEKD-------LSEILSHIMPQDLLKFG 293
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
+IPEFIGR PI+V+L L++D LV++L EPKNAL +QY+K+F ++ VKL F AL LIA
Sbjct: 294 MIPEFIGRVPIVVTLDPLSKDDLVRILTEPKNALTKQYEKLFELDGVKLEFDKKALGLIA 353
Query: 417 KKAMAKNTGARGLRALLENILTEAMFEIPET 447
A+ + TGARGLRA+LE I+ + M+EIP +
Sbjct: 354 DMALERKTGARGLRAILEEIMLDVMYEIPSS 384
>gi|190573023|ref|YP_001970868.1| ATP-dependent protease ATP-binding subunit ClpX [Stenotrophomonas
maltophilia K279a]
gi|254524793|ref|ZP_05136848.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Stenotrophomonas sp. SKA14]
gi|344206261|ref|YP_004791402.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Stenotrophomonas maltophilia JV3]
gi|424667285|ref|ZP_18104310.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Stenotrophomonas maltophilia Ab55555]
gi|229485949|sp|B2FQR3.1|CLPX_STRMK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|190010945|emb|CAQ44554.1| ATP-dependent clp protease ATP-binding subunit ClpX
[Stenotrophomonas maltophilia K279a]
gi|219722384|gb|EED40909.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Stenotrophomonas sp. SKA14]
gi|343777623|gb|AEM50176.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Stenotrophomonas maltophilia JV3]
gi|401069420|gb|EJP77942.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Stenotrophomonas maltophilia Ab55555]
gi|456738230|gb|EMF62907.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Stenotrophomonas maltophilia EPM1]
Length = 429
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 203/424 (47%), Positives = 273/424 (64%), Gaps = 62/424 (14%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E R+S LP P+EI + LD++VIGQ RAK++
Sbjct: 48 NDIIREELEEKAQSARSS-----LPKPREILEVLDQYVIGQNRAKRT------------- 89
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKRI S QK ND+ VEL KSN+LL
Sbjct: 90 --LAVAVYNHYKRI--ESRQK-------------------------NDD-VELAKSNILL 119
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFT+ DAT LT+AGYVGED E+++ KLL D+DVE AQ
Sbjct: 120 VGPTGSGKTLLAETLARLLNVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQ 179
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
+GIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ +
Sbjct: 180 QGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEF 237
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLES 346
+ +DTK+ILFICGGAF GL+K I R D SIGFGA V+++ R + +L
Sbjct: 238 LQVDTKNILFICGGAFAGLDKVIQARSTDVGSIGFGAKVKSSERKQEV------GKVLAE 291
Query: 347 VDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLH 406
V+ DL+ +GLIPEF+GR P++ +L L+E L+++L EPKNA+ +Q+KK+F M NV+L
Sbjct: 292 VEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFEMENVELE 351
Query: 407 FTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
F DAL IA+KA+ + TGARGLR ++E++L + M+++P +V+ V+VD+ +
Sbjct: 352 FRPDALSAIARKALKRKTGARGLRTIVESVLLDTMYDLP----SQENVSKVVVDESVIEH 407
Query: 467 VDAP 470
P
Sbjct: 408 KSEP 411
>gi|256752436|ref|ZP_05493295.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter ethanolicus CCSD1]
gi|256748705|gb|EEU61750.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter ethanolicus CCSD1]
Length = 424
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 198/391 (50%), Positives = 259/391 (66%), Gaps = 58/391 (14%)
Query: 63 NRNSEGNID-----LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYN 117
N E +ID LP PKEI + LD++VIGQE+AKK+ AVYN
Sbjct: 46 NEEFEEDIDMGIGELPKPKEIKEFLDQYVIGQEKAKKA---------------LAVAVYN 90
Query: 118 HYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKT 177
HYKRI N ++ D+ VEL+KSN+LL+GPTGSGKT
Sbjct: 91 HYKRI---------------------------NSRIKPDD-VELQKSNILLLGPTGSGKT 122
Query: 178 LLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEV 237
LLA+TLA+++NVPF I DAT+LT+AGYVGED E++L KL+ AAD+D+E A++GI+YIDE+
Sbjct: 123 LLAQTLAKLLNVPFAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAEKGIIYIDEI 182
Query: 238 DKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDIL 296
DKI K+E+ + RDVSGEGVQQALLK+LEGT+ NVP P G RKHP + I IDT +IL
Sbjct: 183 DKIARKSENPSITRDVSGEGVQQALLKILEGTIANVP-PQGG-RKHPHQEFIQIDTTNIL 240
Query: 297 FICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYG 356
FICGGAF G+EK I R S+GFGA V++ S +L + DL+ +G
Sbjct: 241 FICGGAFEGIEKIIESRIGKKSLGFGAEVQSRKEKD-------LSEILSHIMPQDLLKFG 293
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
+IPEFIGR PI+V+L L++D LV++L EPKNAL +QY+K+F ++ VKL F AL LIA
Sbjct: 294 MIPEFIGRVPIVVTLDPLSKDDLVRILTEPKNALTKQYEKLFELDGVKLEFDKKALGLIA 353
Query: 417 KKAMAKNTGARGLRALLENILTEAMFEIPET 447
A+ + TGARGLRA+LE I+ + M+EIP +
Sbjct: 354 DMALERKTGARGLRAILEEIMLDVMYEIPSS 384
>gi|71907347|ref|YP_284934.1| ATP-dependent protease ATP-binding subunit ClpX [Dechloromonas
aromatica RCB]
gi|123774411|sp|Q47FB7.1|CLPX_DECAR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|71846968|gb|AAZ46464.1| ClpX, ATPase regulatory subunit [Dechloromonas aromatica RCB]
Length = 420
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 196/398 (49%), Positives = 256/398 (64%), Gaps = 55/398 (13%)
Query: 68 GNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSL 127
G DLPTP+EI LD++VIGQE AK+ I + AVYNHYKR+ H++
Sbjct: 57 GRSDLPTPREISSILDQYVIGQEVAKR--ILSV-------------AVYNHYKRLRHTA- 100
Query: 128 QKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIV 187
+N VEL KSN+LL+GPTGSGKTLLA+TLAR++
Sbjct: 101 --------------------------KNAGDVELSKSNILLIGPTGSGKTLLAQTLARLL 134
Query: 188 NVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESR 246
NVPF + DAT LT+AGYVGED E+++ KLL D+DVE AQ+GIVYIDE+DKI K+++
Sbjct: 135 NVPFVMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQQGIVYIDEIDKISRKSDNP 194
Query: 247 NNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGL 306
+ RDVSGEGVQQALLK++EGT + IP G RKHP D + +DT +ILFICGGAF GL
Sbjct: 195 SITRDVSGEGVQQALLKLIEGTTAS--IPPQGGRKHPNQDFVQVDTTNILFICGGAFAGL 252
Query: 307 EKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFP 366
EK I R + IGFGA V++ D +L + DL+ +GLIPE IGR P
Sbjct: 253 EKVIQSRSERGGIGFGAEVKSK------DDGKAVGKILLDAEPEDLIKFGLIPELIGRLP 306
Query: 367 ILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGA 426
++ +L L E LVQ+L EPKNAL +QY+K+FSM +V+L AL IAKKA+A+ TGA
Sbjct: 307 VVATLQELEESALVQILTEPKNALVKQYQKLFSMEDVELEIRPTALSAIAKKALARKTGA 366
Query: 427 RGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
RGLR++LE+ L + M+E+P G SV V++D+ +
Sbjct: 367 RGLRSILEHALLDTMYELP----GMESVEKVVIDENTI 400
>gi|285017389|ref|YP_003375100.1| ATP-dependent clp protease ATP-binding subunit protein [Xanthomonas
albilineans GPE PC73]
gi|283472607|emb|CBA15112.1| probable atp-dependent clp protease atp-binding subunit protein
[Xanthomonas albilineans GPE PC73]
Length = 428
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 204/424 (48%), Positives = 272/424 (64%), Gaps = 62/424 (14%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E R+S LP P+EI + LD++VIGQ+RAK++
Sbjct: 48 NDIIREELEEKAQSARSS-----LPKPREILEVLDQYVIGQQRAKRT------------- 89
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKRI S QK NDE VEL KSN+LL
Sbjct: 90 --LAVAVYNHYKRI--ESRQK-------------------------NDE-VELAKSNILL 119
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DV+ AQ
Sbjct: 120 VGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAQ 179
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
GIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ +
Sbjct: 180 HGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEF 237
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQDS-SIGFGAPVRANMRTGGLTDALVTSSLLES 346
+ +DTK+ILFICGGAF GL+K I +R D+ IGFGA V++ R + +L
Sbjct: 238 LQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSVERKREV------GKILAE 291
Query: 347 VDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLH 406
V+ DL+ +GLIPEF+GR P++ +L L+E L+++L EPKNA+ +Q+KK+F M V+L
Sbjct: 292 VEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFEMEGVELE 351
Query: 407 FTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
F DAL IAKKA+ + TGARGLR ++E++L + M+E+P +V+ V+VD+ +
Sbjct: 352 FRQDALLAIAKKALKRKTGARGLRTIVESVLLDTMYELP----SQENVSKVVVDESVIEH 407
Query: 467 VDAP 470
P
Sbjct: 408 KSEP 411
>gi|148553516|ref|YP_001261098.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas
wittichii RW1]
gi|166215208|sp|A5V3U4.1|CLPX_SPHWW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|148498706|gb|ABQ66960.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sphingomonas
wittichii RW1]
Length = 424
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 198/396 (50%), Positives = 262/396 (66%), Gaps = 61/396 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP EIC+ LD++VIGQ +AK+ AV+NHYKR+ H
Sbjct: 64 VPTPHEICEHLDQYVIGQAKAKRV---------------LSVAVHNHYKRLNH------- 101
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G K + VEL KSN+LL+GPTGSGKTLLA+T+AR+++VPF
Sbjct: 102 -------------GAKGAD--------VELAKSNILLVGPTGSGKTLLAQTMARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI KA++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKADNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 201 DVSGEGVQQALLKLMEGTTASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 258
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
+R Q SIGFGA V A RTG L+ + DL+ +GLIPEF+GR P++
Sbjct: 259 GDRLQGKSIGFGAYVAAPEERRTG---------ETLQQCEPEDLLKFGLIPEFVGRLPVI 309
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E LV++L PKNAL +QY+K+F M VKL FTDDAL IA+KA+ + TGARG
Sbjct: 310 ATLMDLDEAALVEILTAPKNALVKQYQKLFDMEGVKLGFTDDALVAIARKAITRKTGARG 369
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
LR++LE +L + MF++P V+ ++VDK+ V
Sbjct: 370 LRSILEGLLLDTMFDLPS----MDGVDEIMVDKDVV 401
>gi|406980052|gb|EKE01719.1| hypothetical protein ACD_21C00067G0003 [uncultured bacterium]
Length = 421
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 194/418 (46%), Positives = 268/418 (64%), Gaps = 54/418 (12%)
Query: 54 ESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACC 113
+ +T++ + S LPTP+EI KGL+++VIGQE AKK+
Sbjct: 44 QDKTQDQKLQQISTEQTKLPTPEEINKGLNDYVIGQEYAKKA---------------LSV 88
Query: 114 AVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTG 173
AVYNHYKR+ H + +ND VEL KSN+LL+GPTG
Sbjct: 89 AVYNHYKRLAHK--------------------------DKKNDGDVELSKSNILLIGPTG 122
Query: 174 SGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVY 233
SGKTLLA+TLAR++NVPF I DAT LT+AGYVG+D E+++ KLL D+D + A+ GI+Y
Sbjct: 123 SGKTLLAETLARMLNVPFAIADATTLTEAGYVGDDIETIVQKLLQKCDYDTKKAETGIIY 182
Query: 234 IDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDT 292
IDE+DKI K++S + RDVSGEGVQQALLK++EGTV +V P +G RKHP+ + + ++T
Sbjct: 183 IDEIDKISRKSDSASITRDVSGEGVQQALLKLIEGTVASV--PPHGSRKHPQQEYLQVNT 240
Query: 293 KDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDL 352
K+ILFICGGAF L+K I R + S IGF A + G + LL V+ DL
Sbjct: 241 KNILFICGGAFAELDKIIKTRTEKSGIGFAAEIY------GEKNKKDVGELLRQVEPEDL 294
Query: 353 VAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDAL 412
+ +GLIPEF+GR P++ L L E +LV+VL EPKNAL +QY K+F M NV++ F DDAL
Sbjct: 295 IKFGLIPEFVGRLPVIAVLDELEETELVRVLKEPKNALTKQYHKLFMMENVEIEFQDDAL 354
Query: 413 RLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++IA+KA+ K +GARGLR++LE +L + M+ +P K +++ V++D V +AP
Sbjct: 355 KVIAQKALTKKSGARGLRSILEALLLDTMYHLPSQK----NLSKVIIDSGVVNGDNAP 408
>gi|301118793|ref|XP_002907124.1| ATP-dependent Clp protease ATP-binding subunit clpX [Phytophthora
infestans T30-4]
gi|262105636|gb|EEY63688.1| ATP-dependent Clp protease ATP-binding subunit clpX [Phytophthora
infestans T30-4]
Length = 692
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 187/309 (60%), Positives = 239/309 (77%), Gaps = 11/309 (3%)
Query: 157 EIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKL 216
E VEL+K+NV+L+GPTGSGKTLLAKTLAR+ VP I DAT LTQAGYVGED ESVL+KL
Sbjct: 361 EGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKL 420
Query: 217 LAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIP 275
AA++++EA QRGIVYIDE+DKI K+E+ + RDVSGEGVQQALLK+LEG++VNVP
Sbjct: 421 YQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVP-- 478
Query: 276 DNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLT 335
+ G RK+PRG++I IDT +ILFICGGAF GLEK ++ R SSIGFGA + NMR L
Sbjct: 479 EKGGRKNPRGEHITIDTTNILFICGGAFAGLEKQVTRRTSRSSIGFGAQM-PNMR---LK 534
Query: 336 DALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYK 395
D+ LL + DLV+YGLIPEFIGRFP+LVS + L++D+LVQVL EPKN+L RQYK
Sbjct: 535 DSNQIGQLLSQAEPEDLVSYGLIPEFIGRFPMLVSTTGLSKDELVQVLTEPKNSLVRQYK 594
Query: 396 KMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVN 455
+F++++V+ H T+ AL +A+ A+ KNTGARGLR++ E L E MF++P+ + V
Sbjct: 595 ALFALSDVEFHATEGALEAVAESALRKNTGARGLRSIFERALMETMFDLPD----MNDVR 650
Query: 456 AVLVDKEAV 464
AV VD+EA+
Sbjct: 651 AVYVDEEAI 659
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 17/85 (20%)
Query: 39 GGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIF 98
GG + DGE + +E+ + S+ + TP+EI +GL+E+VIGQ++ KK+
Sbjct: 187 GGRMNADGEYEKLANEALFSSAADATVSKDRV--LTPREIYEGLNEYVIGQDKVKKT--- 241
Query: 99 CILVDMLVYVIGACCAVYNHYKRIY 123
V+NHYKR++
Sbjct: 242 ------------LAVGVHNHYKRLH 254
>gi|163759317|ref|ZP_02166403.1| ATP-dependent Clp protease, ATP-binding subunit protein [Hoeflea
phototrophica DFL-43]
gi|162283721|gb|EDQ34006.1| ATP-dependent Clp protease, ATP-binding subunit protein [Hoeflea
phototrophica DFL-43]
Length = 426
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 195/375 (52%), Positives = 257/375 (68%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI LDE+VIGQ +AKK IL AV+NHYKR+ HSS
Sbjct: 66 VPTPQEIIATLDEYVIGQHQAKK-----IL----------SVAVHNHYKRLNHSS----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KSG VEL KSN+LL+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KSGE--------VELAKSNILLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILF+CGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFVCGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S+R + +SIGF A VRA D +L +++ DLV +GLIPEFIGR P+L +
Sbjct: 261 SDRGEKTSIGFSASVRAQ-------DERRVGEVLRALEPEDLVKFGLIPEFIGRLPVLAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY+++F M +V+L F + AL+ IAK+ + + TGARGLR
Sbjct: 314 LEDLDESALIQILTEPKNALVKQYQRLFEMEDVELTFHESALQEIAKRGIIRATGARGLR 373
Query: 431 ALLENILTEAMFEIP 445
+++E IL + MFE+P
Sbjct: 374 SIMEKILLDTMFELP 388
>gi|424863301|ref|ZP_18287214.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [SAR86 cluster
bacterium SAR86A]
gi|400757922|gb|EJP72133.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [SAR86 cluster
bacterium SAR86A]
Length = 418
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 263/401 (65%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+L +P EI LDE+VIGQE+AKK AVYNHYKR+ S L+ +
Sbjct: 59 ELLSPLEIYNQLDEYVIGQEKAKKV---------------LSVAVYNHYKRLKRSGLKDD 103
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
VEL+KSNVLL+GPTGSGKTLLA+TLA+I+NVP
Sbjct: 104 ----------------------------VELQKSNVLLLGPTGSGKTLLAQTLAKILNVP 135
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
FTI DAT LT+AGYVGED E+++ KLL AD+D E A+ GIVYIDE+DKI K+++ +
Sbjct: 136 FTIADATTLTEAGYVGEDVENIIQKLLQKADYDPEKAELGIVYIDEIDKIARKSDNPSIT 195
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGT+ + IP G RKHP+ + I IDT +ILFICGGAF GL K
Sbjct: 196 RDVSGEGVQQALLKLIEGTIAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFSGLNKV 253
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I +R + IGF A V + + L ++ ++ DLV YGLIPEF+GR P++
Sbjct: 254 IEQRTNKTGIGFSAEVDSKSKITSLNKN------IDDLEPEDLVKYGLIPEFVGRLPVIS 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+ED LV++L EPKNAL QYK +F ++NV+L+F D+AL+ IAK+A+++ TGARGL
Sbjct: 308 NLHELDEDALVRILKEPKNALVNQYKHLFEIDNVELNFRDEALKEIAKQAISRKTGARGL 367
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E++L E MFE+P + V++D++ V S + P
Sbjct: 368 RSIMEDLLMETMFELP-----NDDLEKVIIDEKTVASKNDP 403
>gi|384921303|ref|ZP_10021288.1| ATP-dependent protease ATP-binding subunit ClpX [Citreicella sp.
357]
gi|384464818|gb|EIE49378.1| ATP-dependent protease ATP-binding subunit ClpX [Citreicella sp.
357]
Length = 421
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 200/416 (48%), Positives = 273/416 (65%), Gaps = 60/416 (14%)
Query: 56 ETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAV 115
E G ++SEG +P+P+EIC LD++VIGQ AK+ AV
Sbjct: 50 EETKGAGLKSSEG---VPSPREICDVLDDYVIGQFTAKRV---------------LSVAV 91
Query: 116 YNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSG 175
+NHYKR+ HS KS + +EL KSN+LL+GPTG G
Sbjct: 92 HNHYKRLNHSQ--------------------KSAD--------IELAKSNILLIGPTGCG 123
Query: 176 KTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYID 235
KTLLA+TLARI++VPFT+ DAT LT+AGYVGED E+++ KLL +++++VE AQRGIVYID
Sbjct: 124 KTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQSSEYNVERAQRGIVYID 183
Query: 236 EVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKD 294
EVDKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +
Sbjct: 184 EVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTN 241
Query: 295 ILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVA 354
ILFICGGAF GL++ I++R + S++GFGA VR G + ++ DL+
Sbjct: 242 ILFICGGAFAGLDRIIAQRGKGSAMGFGADVRDPDERG-------VGEIFGDLEPEDLLK 294
Query: 355 YGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRL 414
+GLIPEF+GR P++ +L L+E+ LV +L +PKNAL +QY+++F M + KL FTDDAL
Sbjct: 295 FGLIPEFVGRLPVIATLEDLDEEALVTILTKPKNALVKQYQRLFEMEDTKLSFTDDALSA 354
Query: 415 IAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
IAK+A+ + TGARGLR++LE IL + MFE+P G V V+V++EAV S P
Sbjct: 355 IAKRAIERKTGARGLRSILEAILLDTMFELP----GMDDVTEVVVNEEAVTSEAKP 406
>gi|409401839|ref|ZP_11251493.1| ATP-dependent protease ATP-binding subunit ClpX [Acidocella sp.
MX-AZ02]
gi|409129476|gb|EKM99327.1| ATP-dependent protease ATP-binding subunit ClpX [Acidocella sp.
MX-AZ02]
Length = 418
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 197/392 (50%), Positives = 265/392 (67%), Gaps = 57/392 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EICK LD++VIGQ AK+ AV+NHYKR+ H++
Sbjct: 62 VPTPREICKVLDDYVIGQMHAKRV---------------LSVAVHNHYKRLSHAT----- 101
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KS ND VE+ KSN++L+GPTGSGKTLLA+TLARI++VPF
Sbjct: 102 ---------------KS------ND--VEIAKSNIMLVGPTGSGKTLLAQTLARILDVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 139 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 199 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + S IGFGA VR+ D ++L V+ DL+ +GLIPEFIGR P++ +
Sbjct: 257 SARGKGSGIGFGADVRSQ-------DERRMGAILREVEPEDLLKFGLIPEFIGRLPVVAT 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+++L +PKNAL +QY ++F M VKL FT+DAL+++A +A+ + TGARGLR
Sbjct: 310 LEDLDEAALIEILTKPKNALVKQYGRLFEMEGVKLTFTEDALKVVANRAIKRKTGARGLR 369
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKE 462
+++E IL MF++P G V+ V++ E
Sbjct: 370 SIMEGILLATMFDLP----GLEGVSEVVISGE 397
>gi|389681306|ref|ZP_10172651.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
chlororaphis O6]
gi|399007986|ref|ZP_10710480.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM17]
gi|425900380|ref|ZP_18876971.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|388554842|gb|EIM18090.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
chlororaphis O6]
gi|397890343|gb|EJL06825.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|398119026|gb|EJM08742.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM17]
Length = 427
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 199/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ +NDE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKNDE-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTRGGIGFNAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +AK+A+ + TGARGLR
Sbjct: 315 LDELDEAALIQILTEPKNALTKQYAKLFEMEGVDLEFRTDALKSVAKRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSEVSKVVIDESVIEGKSKP 410
>gi|188590512|ref|YP_001921997.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum E3 str. Alaska E43]
gi|251778366|ref|ZP_04821286.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum E1 str. 'BoNT E Beluga']
gi|238691974|sp|B2UX12.1|CLPX_CLOBA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|188500793|gb|ACD53929.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum E3 str. Alaska E43]
gi|243082681|gb|EES48571.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum E1 str. 'BoNT E Beluga']
Length = 429
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 196/400 (49%), Positives = 263/400 (65%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P P EI + LD +VIGQERAKKS AVYNHYKRI
Sbjct: 60 VPKPNEIKQYLDSYVIGQERAKKS---------------LSVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N N + D VEL KSN+LL+GPTGSGKTLLA+TLA+++NVPF
Sbjct: 96 ------------------NTN-KQDTDVELSKSNILLLGPTGSGKTLLAQTLAKVLNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ AD+DVE A+RGI+YIDE+DKI K+E+ + R
Sbjct: 137 AIADATTLTEAGYVGEDVENILLKLIQNADYDVERAERGIIYIDEIDKIARKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV +VP P G RKHP + I I+T +ILFICGGAF G++K I
Sbjct: 197 DVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQINTSNILFICGGAFDGVDKII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R + SS+GFGA ++ LL+ + GDL+ +GLIPEF+GR PILV+
Sbjct: 255 ENRTRKSSMGFGAEIQGKHEKD-------IGKLLKEIMPGDLLKFGLIPEFVGRLPILVT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L +L++D L+ +L +PKNAL +QYKK+F +++V+L F ++AL IA++A+ + TGARGLR
Sbjct: 308 LESLDKDALINILTKPKNALVKQYKKLFELDDVELEFNNEALTSIAEEAIERKTGARGLR 367
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
A++E ++TE M+EIP + V++ +E + + P
Sbjct: 368 AIIEEMMTEIMYEIP----SDEQITKVIITEECIKDKENP 403
>gi|227542943|ref|ZP_03972992.1| ATP-dependent protease ATP-binding subunit [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227181165|gb|EEI62137.1| ATP-dependent protease ATP-binding subunit [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 418
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 197/390 (50%), Positives = 262/390 (67%), Gaps = 50/390 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTPKEI + LDE+VIGQ+ AKK AVYNHYKR+
Sbjct: 63 LPTPKEIKEFLDEYVIGQDEAKKV---------------LSVAVYNHYKRVK-------- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ ++ GS D+ VEL+KSN+LL+GPTG GKT LA+TLA+ ++VPF
Sbjct: 100 ------LQNVFGS-----------DDGVELQKSNILLLGPTGCGKTYLAQTLAKKLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT+LT+AGYVGED E++L +LL AADFDV+ A+ GIVYIDE+DKI K E+ + R
Sbjct: 143 TIADATSLTEAGYVGEDVENILLRLLQAADFDVKKAEHGIVYIDEIDKITRKGENVSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV + IP G RKHP + I +DT +ILFI GAF GLEK I
Sbjct: 203 DVSGEGVQQALLKILEGTVAS--IPPQGGRKHPNQELIQVDTSNILFIASGAFAGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
ER S+GFGA +R+N + L +++L+ V DLV +GLIPEFIGR P+ +
Sbjct: 261 QERVGKKSLGFGADIRSN-------EELENANILQKVQPEDLVKFGLIPEFIGRLPVTAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
++ L++ LV VL EPKN+L +QY+KMFS ++ +L FTD AL IA+KA+A+ TGARGLR
Sbjct: 314 VNQLDKKALVSVLTEPKNSLVKQYQKMFSYDDTELVFTDGALGAIAEKALARKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVD 460
A++E IL M++IP ++ +++A +V+
Sbjct: 374 AIMEEILVPVMYDIPSREVSKVTIDAGVVN 403
>gi|261379792|ref|ZP_05984365.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
subflava NJ9703]
gi|284797477|gb|EFC52824.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
subflava NJ9703]
Length = 421
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 207/443 (46%), Positives = 273/443 (61%), Gaps = 65/443 (14%)
Query: 40 GFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFC 99
G + +D ES IE+E + N+E LPTP EI L++ VIGQE AKK+
Sbjct: 38 GMMLQDNESGEIENELAK---AKEENTEKK--LPTPAEIVANLNDHVIGQEHAKKA---- 88
Query: 100 ILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIV 159
+VYNHYKR+ H + + V
Sbjct: 89 -----------LAVSVYNHYKRLRHPKAEGK----------------------------V 109
Query: 160 ELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAA 219
EL KSN+LL+GPTGSGKTLLA++LAR ++VPF + DAT LT+AGYVGED E ++ KLL
Sbjct: 110 ELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLGK 169
Query: 220 ADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNG 278
DFDVE AQRGIVYIDE+DKI K+++ + RDVSGEGVQQALLK++EGTV +VP P G
Sbjct: 170 CDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG 228
Query: 279 PRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDAL 338
RKHP + I +DT +ILFICGGAF GLEK I +R + IGFGA V + +
Sbjct: 229 -RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSKDENADI---- 283
Query: 339 VTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMF 398
S+L E+V+ DL+ +GLIPE IGR P++ +L+ L+ED LV +L EPKNAL +QY+ +F
Sbjct: 284 --SALFETVEPEDLIKFGLIPELIGRLPVIATLAELDEDALVNILTEPKNALVKQYQTLF 341
Query: 399 SMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVL 458
M +V L F +DALR IAK AM + TGARGLR+++E L + M+ +P+ K V V+
Sbjct: 342 EMEDVGLEFEEDALRSIAKLAMERKTGARGLRSIVERCLLDTMYTLPDLK----DVAKVV 397
Query: 459 VDKEAVGSVDAPGCGAKILHGDG 481
++KE V + P K+ DG
Sbjct: 398 INKEVVEKGEQP----KLFREDG 416
>gi|58580657|ref|YP_199673.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas oryzae
pv. oryzae KACC 10331]
gi|84622590|ref|YP_449962.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas oryzae
pv. oryzae MAFF 311018]
gi|384418135|ref|YP_005627495.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
oryzae pv. oryzicola BLS256]
gi|81311961|sp|Q5H433.1|CLPX_XANOR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123522986|sp|Q2P6Y9.1|CLPX_XANOM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|58425251|gb|AAW74288.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas oryzae
pv. oryzae KACC 10331]
gi|84366530|dbj|BAE67688.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas oryzae
pv. oryzae MAFF 311018]
gi|353461049|gb|AEQ95328.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
oryzae pv. oryzicola BLS256]
Length = 428
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 202/424 (47%), Positives = 272/424 (64%), Gaps = 62/424 (14%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E R+S LP P+EI + LD++VIGQ RAK++
Sbjct: 48 NDIIREELEEKAQSARSS-----LPKPREILEVLDQYVIGQLRAKRT------------- 89
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKRI S +ND+ VEL KSN+LL
Sbjct: 90 --LAVAVYNHYKRIESRS---------------------------KNDD-VELAKSNILL 119
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ
Sbjct: 120 VGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQ 179
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
+GIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ +
Sbjct: 180 QGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEF 237
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQDS-SIGFGAPVRANMRTGGLTDALVTSSLLES 346
+ +DTK+ILFICGGAF GL+K I +R D+ IGFGA V+++ R + +L
Sbjct: 238 LQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSERKQEV------GKILAE 291
Query: 347 VDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLH 406
V+ DL+ +GLIPEF+GR P++ +L L+E L+++L EPKNA+ +Q+KK+F M V+L
Sbjct: 292 VEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFDMEGVELE 351
Query: 407 FTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
F DAL IAKKA+ + TGARGLR ++E++L + M+E+P +V+ V+VD+ +
Sbjct: 352 FRADALSAIAKKALKRKTGARGLRTIVESVLLDTMYELP----SQENVSKVVVDESVIEH 407
Query: 467 VDAP 470
P
Sbjct: 408 KSEP 411
>gi|359411826|ref|ZP_09204291.1| ATP-dependent Clp protease ATP-binding subunit clpX [Clostridium
sp. DL-VIII]
gi|357170710|gb|EHI98884.1| ATP-dependent Clp protease ATP-binding subunit clpX [Clostridium
sp. DL-VIII]
Length = 429
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 261/401 (65%), Gaps = 59/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P P EI + LD +VIGQERAKKS AVYNHYKRI
Sbjct: 60 VPKPNEIKEYLDSYVIGQERAKKS---------------LAVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEI-VELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N D+I VEL KSN+LL+GPTGSGKTLLA+TLAR +NVP
Sbjct: 96 --------------------NTNKDDIDVELSKSNILLLGPTGSGKTLLAQTLARFLNVP 135
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT LT+AGYVGED E++L KL+ AD+DVE A+RGI+YIDE+DKI K+E+ +
Sbjct: 136 FAIADATTLTEAGYVGEDVENILLKLIQNADYDVEKAERGIIYIDEIDKIARKSENPSIT 195
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I I+T +ILFICGGAF G++K
Sbjct: 196 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQINTSNILFICGGAFDGVDKI 253
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R + SS+GFGA ++A LL+ + DL+ +GLIPEF+GR PILV
Sbjct: 254 IENRTRKSSMGFGAEIQAKHEKD-------VGKLLKEIMPADLLKFGLIPEFVGRLPILV 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L +L+ + L+Q+L +PKNAL +QYKK+F +++VKL F + +L IA +A+++ TGARGL
Sbjct: 307 TLESLDREALIQILTKPKNALVKQYKKLFELDDVKLEFDNKSLESIADEAISRQTGARGL 366
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA++E+I+ E M+EIP + + V + ++A+ P
Sbjct: 367 RAIIEDIMNEVMYEIP----SDNRITKVTITEDAIKDKKEP 403
>gi|146307079|ref|YP_001187544.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
mendocina ymp]
gi|421501786|ref|ZP_15948743.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
mendocina DLHK]
gi|166214806|sp|A4XTZ6.1|CLPX_PSEMY RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|145575280|gb|ABP84812.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
mendocina ymp]
gi|400347529|gb|EJO95882.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
mendocina DLHK]
Length = 426
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 257/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPAPKEISAILDQYVIGQERAKKV---------------LSVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + D+ VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 101 ------------------NQRDKKDD-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFAGLEKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGFGA VR+ + ++ L V+ DLV +GLIPEF+GR P++ +
Sbjct: 260 QARSTKGGIGFGAEVRSKQEGKKIGES------LREVEPDDLVKFGLIPEFVGRLPVIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E LVQ+L EPKNAL +QY K+F M V L F DAL+ +A++A+ + TGARGLR
Sbjct: 314 LEELDEAALVQILTEPKNALTKQYAKLFEMEGVDLEFRSDALKSVAQRALERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE IL + M+EIP + V+ V++D+ + P
Sbjct: 374 SILEGILLDTMYEIPSQQ----DVSKVVIDESVIDGSSKP 409
>gi|338811973|ref|ZP_08624172.1| ATP-dependent protease ATP-binding subunit ClpX [Acetonema longum
DSM 6540]
gi|337275942|gb|EGO64380.1| ATP-dependent protease ATP-binding subunit ClpX [Acetonema longum
DSM 6540]
Length = 420
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 263/401 (65%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI LD++VIGQ+ AKKS AVYNHYKRI
Sbjct: 60 DVPKPKEIRSILDQYVIGQDEAKKS---------------LAVAVYNHYKRIN------- 97
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
LGS V VEL+KSN++++GPTGSGKTLLA+TLA+I+NVP
Sbjct: 98 -----------LGSKVDD----------VELQKSNIVMLGPTGSGKTLLAQTLAKILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+ GYVGED E++L KL+ AAD+DVE A++GIVYIDE+DKI K+E+ +
Sbjct: 137 FAIADATSLTEVGYVGEDVENILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ +VP P G RKHP + I IDT +ILFICGGAF G++K
Sbjct: 197 RDVSGEGVQQALLKILEGTIASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFDGVDKI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
IS R ++GFGA V+ + +L + DL+ YGLIPEF+GR P++V
Sbjct: 255 ISARTGKKTLGFGADVKTK-------ETKKVGEILRQILPEDLLKYGLIPEFVGRLPVIV 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+ED LV++L+EPKNAL +QY+K ++NV+L F +D LR IA +A+ +NTGARGL
Sbjct: 308 TLDALDEDALVRILVEPKNALVKQYQKFLELDNVQLEFKEDGLRAIAAEALKRNTGARGL 367
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA++E I+ M+++P + V +V KE V + + P
Sbjct: 368 RAIIEAIMRNVMYDVP----SRNDVTKCIVTKEVVVNKEEP 404
>gi|399520090|ref|ZP_10760871.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399111982|emb|CCH37430.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 426
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 199/400 (49%), Positives = 258/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPAPKEISAILDQYVIGQERAKKV---------------LSVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + D+ VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 101 ------------------NQRDKKDD-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT+LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATSLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFAGLEKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGFGA VR+ + ++ L V+ DLV +GLIPEF+GR P++ +
Sbjct: 260 QARSTKGGIGFGAEVRSKQEGKKIGES------LREVEPDDLVKFGLIPEFVGRLPVIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E LVQ+L EPKNAL +QY K+F M V L F DAL+ +A+KA+ + TGARGLR
Sbjct: 314 LEELDEAALVQILTEPKNALTKQYAKLFEMEGVDLEFRPDALKSVAQKALERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE IL + M+EIP + V+ V++D+ + P
Sbjct: 374 SILEGILLDTMYEIPSQQ----GVSKVVIDESVIEGSSKP 409
>gi|308050307|ref|YP_003913873.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Ferrimonas
balearica DSM 9799]
gi|307632497|gb|ADN76799.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Ferrimonas
balearica DSM 9799]
Length = 425
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 202/413 (48%), Positives = 263/413 (63%), Gaps = 60/413 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LDE+VIGQE+AKK AVYNHYKR+ H + E
Sbjct: 66 LPTPHEIRAHLDEYVIGQEQAKKV---------------LAVAVYNHYKRLRHGGDEAE- 109
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 110 ---------------------------VELGKSNILLIGPTGSGKTLLAETLARLLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SERR-QDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR+ LT+ V+ DLV YGLIPEFIGR P++
Sbjct: 261 EQRAFTGTGIGFGAEVRSKDDGKSLTETFA------RVEPEDLVKYGLIPEFIGRLPVVA 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+ED L+Q+L EPKNAL +QY +F + V+L F +DALR IA+KAM + TGARGL
Sbjct: 315 TLGELDEDALIQILQEPKNALTKQYGALFDLEGVELEFREDALRAIARKAMERKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGE 482
R+++E +L + M+++P + V+ V+VD+ + AP I +GD +
Sbjct: 375 RSIVEGVLLDTMYDLPSAQ----DVSKVVVDESVIKGETAP---LMIYNGDAQ 420
>gi|315499704|ref|YP_004088507.1| ATP-dependent clp protease, ATP-binding subunit clpx [Asticcacaulis
excentricus CB 48]
gi|315417716|gb|ADU14356.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Asticcacaulis
excentricus CB 48]
Length = 419
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 202/396 (51%), Positives = 266/396 (67%), Gaps = 58/396 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEI + LD++VIGQ +AKK AV+NHYKR+ H++
Sbjct: 63 VPTPKEIREVLDDYVIGQAQAKKV---------------LSVAVHNHYKRLNHAA----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
GN VEL KSN++L+GPTGSGKTLLA+TLARI++VPF
Sbjct: 103 ----------------KGND-------VELAKSNIMLIGPTGSGKTLLAQTLARIIDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 257
Query: 311 SERRQDSSIGFGAPVR--ANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGFGA V+ R G +L V+ DL+ +GLIPEFIGR P+L
Sbjct: 258 SGRGKGTSIGFGATVKDPEERRLG---------EVLHQVEPDDLMKFGLIPEFIGRLPVL 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E LV++L EPKNAL +QY ++F M NV L FTD+AL +AKKA+ + TGARG
Sbjct: 309 ATLEDLDEATLVKILTEPKNALVKQYARLFEMENVTLTFTDEALFAVAKKAIVRKTGARG 368
Query: 429 LRALLENILTEAMFEIPETK-IGTSSVNAVLVDKEA 463
LR++LE IL + M+E+P + + +NA +V++ A
Sbjct: 369 LRSILEGILLDTMYELPNMQGVEEVVINAEVVEERA 404
>gi|333977878|ref|YP_004515823.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Desulfotomaculum kuznetsovii DSM 6115]
gi|333821359|gb|AEG14022.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Desulfotomaculum kuznetsovii DSM 6115]
Length = 416
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 197/403 (48%), Positives = 265/403 (65%), Gaps = 61/403 (15%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI + LD++VIGQE+AKK+ AVYNHYKRI
Sbjct: 57 DIPKPKEIKEILDQYVIGQEQAKKT---------------LAVAVYNHYKRIN------- 94
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
LG + VEL+KSN++++GPTG GKTLLA+TLAR++NVP
Sbjct: 95 -----------LGGKIDD----------VELQKSNIIMLGPTGCGKTLLAQTLARLLNVP 133
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A++GIVYIDE+DKI K+E+ +
Sbjct: 134 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSIT 193
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I +DT +ILFICGGAF G+EK
Sbjct: 194 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQLDTTNILFICGGAFDGIEKI 251
Query: 310 ISERRQDSSIGFGAPV--RANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPI 367
I R +GFGA + R + + G +L + DL+ YGLIPEF+GR PI
Sbjct: 252 IQNRIGKKGLGFGAEIQSRRDQKIG---------EILSQILPEDLLKYGLIPEFVGRLPI 302
Query: 368 LVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGAR 427
+V+L AL+E+ L+++L EPKNAL +QY+K+F ++ V L F DALR +A++A+ +NTGAR
Sbjct: 303 IVTLDALDEEALIRILTEPKNALVKQYEKLFELDGVSLEFHPDALRTVAQEALKRNTGAR 362
Query: 428 GLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
GLRA+LE+I+ + M+EIP + V++ KE + + P
Sbjct: 363 GLRAILEDIMLDVMYEIP----SREDIARVIITKETILKKEKP 401
>gi|21241839|ref|NP_641421.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. citri str. 306]
gi|78046638|ref|YP_362813.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|289664184|ref|ZP_06485765.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. vasculorum NCPPB 702]
gi|289668775|ref|ZP_06489850.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. musacearum NCPPB 4381]
gi|294627914|ref|ZP_06706493.1| ATP-dependent protease ATP-binding subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|294666561|ref|ZP_06731802.1| ATP-dependent protease ATP-binding subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|325914925|ref|ZP_08177257.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
vesicatoria ATCC 35937]
gi|325927442|ref|ZP_08188689.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
perforans 91-118]
gi|346723959|ref|YP_004850628.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. citrumelo F1]
gi|381170419|ref|ZP_09879576.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
citri pv. mangiferaeindicae LMG 941]
gi|390990706|ref|ZP_10260987.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. punicae str. LMG 859]
gi|418517008|ref|ZP_13083176.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. malvacearum str. GSPB1386]
gi|23813860|sp|Q8PNI4.1|CLPX_XANAC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123585731|sp|Q3BWQ0.1|CLPX_XANC5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|21107219|gb|AAM35957.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
axonopodis pv. citri str. 306]
gi|78035068|emb|CAJ22713.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|292597828|gb|EFF41986.1| ATP-dependent protease ATP-binding subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|292603705|gb|EFF47115.1| ATP-dependent protease ATP-binding subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|325538818|gb|EGD10482.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
vesicatoria ATCC 35937]
gi|325542192|gb|EGD13687.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
perforans 91-118]
gi|346648706|gb|AEO41330.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. citrumelo F1]
gi|372554559|emb|CCF67962.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. punicae str. LMG 859]
gi|380689080|emb|CCG36063.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
citri pv. mangiferaeindicae LMG 941]
gi|410706221|gb|EKQ64683.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. malvacearum str. GSPB1386]
Length = 428
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 202/424 (47%), Positives = 272/424 (64%), Gaps = 62/424 (14%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E R+S LP P+EI + LD++VIGQ RAK++
Sbjct: 48 NDIIREELEEKAQSARSS-----LPKPREILEVLDQYVIGQLRAKRT------------- 89
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKRI S +ND+ VEL KSN+LL
Sbjct: 90 --LAVAVYNHYKRIESRS---------------------------KNDD-VELAKSNILL 119
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ
Sbjct: 120 VGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQ 179
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
+GIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ +
Sbjct: 180 QGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEF 237
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQDS-SIGFGAPVRANMRTGGLTDALVTSSLLES 346
+ +DTK+ILFICGGAF GL+K I +R D+ IGFGA V+++ R + +L
Sbjct: 238 LQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSERKQEV------GKILAE 291
Query: 347 VDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLH 406
V+ DL+ +GLIPEF+GR P++ +L L+E L+++L EPKNA+ +Q+KK+F M V+L
Sbjct: 292 VEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFDMEGVELE 351
Query: 407 FTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
F DAL IAKKA+ + TGARGLR ++E++L + M+E+P +V+ V+VD+ +
Sbjct: 352 FRPDALSAIAKKALKRKTGARGLRTIVESVLLDTMYELP----SQENVSKVVVDESVIEH 407
Query: 467 VDAP 470
P
Sbjct: 408 KSEP 411
>gi|83949689|ref|ZP_00958422.1| ATP-dependent protease ATP-binding subunit [Roseovarius nubinhibens
ISM]
gi|83837588|gb|EAP76884.1| ATP-dependent protease ATP-binding subunit [Roseovarius nubinhibens
ISM]
Length = 421
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 189/375 (50%), Positives = 257/375 (68%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EIC LD++VIGQ AK+ AV+NHYKR+ HS
Sbjct: 63 VPTPREICDVLDDYVIGQAMAKRV---------------LSVAVHNHYKRLNHSG----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KSG+ +EL+KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ---------------KSGD--------IELQKSNILLIGPTGCGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +++++VE AQRGIVYIDEVDKI K+E+ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 200 DVSGEGVQQALLKLMEGTVAAVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
++R + S++GFGA VR N G + + ++ DL+ +GLIPEF+GR P++ +
Sbjct: 258 AQRGKGSAMGFGADVRDNDDRG-------VGEVFKELEPEDLLKFGLIPEFVGRLPVIAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+ +L EPKNAL +QY+++F + +L FTDDAL+ IAK+A+ + TGARGLR
Sbjct: 311 LEDLDEDALITILTEPKNALVKQYQRLFELEGAQLSFTDDALKAIAKRAIQRKTGARGLR 370
Query: 431 ALLENILTEAMFEIP 445
++LE+IL MFE+P
Sbjct: 371 SILEDILLNTMFELP 385
>gi|395789945|ref|ZP_10469453.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
taylorii 8TBB]
gi|395428167|gb|EJF94249.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
taylorii 8TBB]
Length = 424
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 200/411 (48%), Positives = 268/411 (65%), Gaps = 68/411 (16%)
Query: 36 EIMGGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKS 95
E+ IR++ +S+GI++ +PTP+EI LD++VIGQ+ AK+
Sbjct: 44 ELCMDIIREENKSSGIKARD---------------GVPTPQEIITVLDDYVIGQQHAKRV 88
Query: 96 HIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEN 155
AV+NHYKR+ H S KS N
Sbjct: 89 ---------------LSVAVHNHYKRLAHQS--------------------KS------N 107
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
D +EL KSN+LL+GPTG GKT LA+TLARI++VPFT+ DAT LT+AGYVGED E+++ K
Sbjct: 108 D--IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILK 165
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
LL AAD++VE AQRGIVYIDEVDKI KA++ + RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQAADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVP- 224
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
P G RKHP+ + + +DT +ILFICGGAF GLE+ IS R + +SIGF A V+A
Sbjct: 225 PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA------- 276
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
D + ++ DL+ +GLIPEFIGR PI+ +L L+ + LVQ+L +PKNAL +QY
Sbjct: 277 PDERCVGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALVQILSQPKNALVKQY 336
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP 445
+++F M NV+L F +DALR+IAKKA+ + TGARGLR+++E IL E MFE+P
Sbjct: 337 QRLFEMENVELAFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFELP 387
>gi|332305575|ref|YP_004433426.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola sp.
4H-3-7+YE-5]
gi|410641919|ref|ZP_11352438.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
chathamensis S18K6]
gi|410646704|ref|ZP_11357154.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
agarilytica NO2]
gi|332172904|gb|AEE22158.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Glaciecola
sp. 4H-3-7+YE-5]
gi|410133876|dbj|GAC05553.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
agarilytica NO2]
gi|410138821|dbj|GAC10625.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
chathamensis S18K6]
Length = 425
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 197/402 (49%), Positives = 267/402 (66%), Gaps = 57/402 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTPKEI LD++VIGQE AKK AVYNHYKR+
Sbjct: 64 ELPTPKEIHSHLDDYVIGQEHAKKV---------------LSVAVYNHYKRL-------- 100
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
++G+ + + VEL KSN+LLMGPTGSGKTLLA+TLAR+++VP
Sbjct: 101 ----------------RNGDVH----DGVELGKSNILLMGPTGSGKTLLAETLARLLDVP 140
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
FT+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ +
Sbjct: 141 FTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSIT 200
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT ILFICGGAF GL+K
Sbjct: 201 RDVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKV 258
Query: 310 ISERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I +R + IGFG+ ++ +++ LL+ V+ DLV YGLIPEFIGR P+L
Sbjct: 259 IEQRAHTGTGIGFGSAIK------DISNKSKEGELLKKVEPEDLVKYGLIPEFIGRLPVL 312
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
SL L+E+ L+Q+L EPKN+L +QY +FS+ + +L F DDAL+ IAKKAM++ TGARG
Sbjct: 313 TSLEELSEEALIQILREPKNSLTKQYAALFSLEDTELEFRDDALQAIAKKAMSRKTGARG 372
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E +L + M+E+P S+V+ V+VD+ + P
Sbjct: 373 LRSIVEAVLLDTMYELP----SMSNVSKVVVDETVIRGESKP 410
>gi|423711328|ref|ZP_17685648.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
washoensis Sb944nv]
gi|395415242|gb|EJF81677.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
washoensis Sb944nv]
Length = 424
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 199/405 (49%), Positives = 270/405 (66%), Gaps = 54/405 (13%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
N++ + + +PTP+EI LD++VIGQ+ AK+ AV+NHYK
Sbjct: 54 NKSSSIKARDGVPTPQEIITVLDDYVIGQQHAKRV---------------LSVAVHNHYK 98
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
R+ H S KS ND +EL KSN+LL+GPTG GKT LA
Sbjct: 99 RLAHQS--------------------KS------ND--IELAKSNILLVGPTGCGKTYLA 130
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+TLARI++VPFT+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI
Sbjct: 131 QTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKI 190
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
KA++ + RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT +ILFIC
Sbjct: 191 SRKADNPSITRDVSGEGVQQALLKIMEGTIASVP-PQGG-RKHPQQEFLQVDTTNILFIC 248
Query: 300 GGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIP 359
GGAF GLE+ IS R + +SIGF A V+A D + ++ DL+ +GLIP
Sbjct: 249 GGAFAGLERIISGRGKKTSIGFSATVKA-------PDERCVGEIFRDLEPEDLIKFGLIP 301
Query: 360 EFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKA 419
EFIGR PI+ +L L+ + LVQ+L +PKNAL +QY+++F M NV+L F +DALR+IAKKA
Sbjct: 302 EFIGRLPIVATLEDLDVNALVQILSQPKNALVKQYQRLFEMENVELAFHEDALRVIAKKA 361
Query: 420 MAKNTGARGLRALLENILTEAMFEIPETK-IGTSSVNAVLVDKEA 463
+ + TGARGLR+++E IL E MFE+P + + +++ +VD EA
Sbjct: 362 IERKTGARGLRSIMEKILLETMFELPALEGVQKVVISSDVVDGEA 406
>gi|115314707|ref|YP_763430.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica OSU18]
gi|115129606|gb|ABI82793.1| endopeptidase Clp [Francisella tularensis subsp. holarctica OSU18]
Length = 417
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 194/378 (51%), Positives = 245/378 (64%), Gaps = 51/378 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI K LD+++IGQ+ AKK AVYNHYKRI
Sbjct: 56 LPKPVEIKKYLDDYIIGQDNAKKV---------------LSVAVYNHYKRI--------- 91
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N+ D+ EL++SNVLL+GPTGSGKTL A+TLA+++NVPF
Sbjct: 92 ------------------TSNLTKDDDTELKRSNVLLIGPTGSGKTLFAQTLAKLLNVPF 133
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVG+D E+++ +LL ADFDV AQ+GI+YIDE+DKI K+ES + R
Sbjct: 134 AIADATTLTKAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKSESTSITR 193
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP D I +DT DILFICGGAF G+EK I
Sbjct: 194 DVSGEGVQQALLKLIEGTVSSVP-PKGG-RKHPNQDMIQVDTSDILFICGGAFAGIEKVI 251
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R SIGF A V ++L + L++ ++S DL +GLIPE IGR PI+
Sbjct: 252 KHRMDKVSIGFNADVIQQ------KNSLDSDKLMQKIESEDLTRFGLIPELIGRLPIVTV 305
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L E+ LV++L EPKNAL +QY K+F +NV + FTD AL IAKKA+ K TGARGLR
Sbjct: 306 LNELKEEDLVRILTEPKNALIKQYIKLFKFDNVNIEFTDQALVEIAKKAITKKTGARGLR 365
Query: 431 ALLENILTEAMFEIPETK 448
+LEN+L E MF IP ++
Sbjct: 366 TILENVLLEVMFHIPSSE 383
>gi|56707750|ref|YP_169646.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis SCHU S4]
gi|110670221|ref|YP_666778.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis FSC198]
gi|254370253|ref|ZP_04986259.1| hypothetical protein FTBG_01378 [Francisella tularensis subsp.
tularensis FSC033]
gi|254874563|ref|ZP_05247273.1| ATP-dependent clp protease ATP-binding subunit clpX [Francisella
tularensis subsp. tularensis MA00-2987]
gi|379717000|ref|YP_005305336.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis TIGB03]
gi|379725604|ref|YP_005317790.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis TI0902]
gi|385794386|ref|YP_005830792.1| ATP-dependent protease ATP-binding subunit [Francisella tularensis
subsp. tularensis NE061598]
gi|421755255|ref|ZP_16192205.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 80700075]
gi|61211391|sp|Q5NH46.1|CLPX_FRATT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|56604242|emb|CAG45258.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320554|emb|CAL08641.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
tularensis FSC198]
gi|151568497|gb|EDN34151.1| hypothetical protein FTBG_01378 [Francisella tularensis subsp.
tularensis FSC033]
gi|254840562|gb|EET18998.1| ATP-dependent clp protease ATP-binding subunit clpX [Francisella
tularensis subsp. tularensis MA00-2987]
gi|282158921|gb|ADA78312.1| ATP-dependent protease ATP-binding subunit [Francisella tularensis
subsp. tularensis NE061598]
gi|377827053|gb|AFB80301.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis TI0902]
gi|377828677|gb|AFB78756.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis TIGB03]
gi|409088590|gb|EKM88654.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 80700075]
Length = 417
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 194/378 (51%), Positives = 245/378 (64%), Gaps = 51/378 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI K LD+++IGQ+ AKK AVYNHYKRI
Sbjct: 56 LPKPVEIKKYLDDYIIGQDNAKKV---------------LSVAVYNHYKRI--------- 91
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N+ D+ EL+KSNVLL+GPTGSGKTL A+TLA+++NVPF
Sbjct: 92 ------------------TSNLTKDDDTELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPF 133
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVG+D E+++ +LL ADFDV AQ+GI+YIDE+DKI K+ES + R
Sbjct: 134 AIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKSESTSITR 193
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP D I +DT DILFICGGAF G+EK I
Sbjct: 194 DVSGEGVQQALLKLIEGTVSSVP-PKGG-RKHPNQDMIQVDTSDILFICGGAFAGIEKVI 251
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R SIGF + V ++L + L++ ++S DL +GLIPE IGR PI+
Sbjct: 252 KHRMDKVSIGFNSDVIQQ------KNSLDSDKLMQKIESEDLTRFGLIPELIGRLPIVTV 305
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L E+ LV++L EPKNAL +QY K+F +NV + FTD AL IAKKA+ K TGARGLR
Sbjct: 306 LNELKEEDLVRILTEPKNALIKQYIKLFKFDNVNIEFTDQALVEIAKKAITKKTGARGLR 365
Query: 431 ALLENILTEAMFEIPETK 448
+LEN+L E MF IP ++
Sbjct: 366 TILENVLLEVMFHIPSSE 383
>gi|167038049|ref|YP_001665627.1| ATP-dependent protease ATP-binding subunit ClpX [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116458|ref|YP_004186617.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|326391009|ref|ZP_08212558.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter ethanolicus JW 200]
gi|392940443|ref|ZP_10306087.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermoanaerobacter siderophilus SR4]
gi|238687678|sp|B0KBA3.1|CLPX_THEP3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166856883|gb|ABY95291.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319929549|gb|ADV80234.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|325992954|gb|EGD51397.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter ethanolicus JW 200]
gi|392292193|gb|EIW00637.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermoanaerobacter siderophilus SR4]
Length = 424
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 194/378 (51%), Positives = 255/378 (67%), Gaps = 53/378 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LP PKEI + LD++VIGQE+AKK+ AVYNHYKRI
Sbjct: 59 ELPKPKEIKEFLDQYVIGQEKAKKA---------------LAVAVYNHYKRI-------- 95
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N ++ D+ VEL+KSN+LL+GPTGSGKTLLA+TLA+++NVP
Sbjct: 96 -------------------NSRIKPDD-VELQKSNILLLGPTGSGKTLLAQTLAKLLNVP 135
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E A++GI+YIDE+DKI K+E+ +
Sbjct: 136 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAEKGIIYIDEIDKIARKSENPSIT 195
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ NVP P G RKHP + I IDT +ILFICGGAF G+EK
Sbjct: 196 RDVSGEGVQQALLKILEGTIANVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFEGIEKI 253
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R S+GFGA V++ S +L + DL+ +G+IPEFIGR PI+V
Sbjct: 254 IESRIGKKSLGFGAEVQSRKEKD-------LSEILSHIMPQDLLKFGMIPEFIGRVPIVV 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L++D LV++L EPKNAL +QY+K+F ++ VKL F AL LIA A+ + TGARGL
Sbjct: 307 TLDPLSKDDLVRILTEPKNALTKQYEKLFELDGVKLEFDKKALGLIADMALERKTGARGL 366
Query: 430 RALLENILTEAMFEIPET 447
RA+LE I+ + M+EIP +
Sbjct: 367 RAILEEIMLDVMYEIPSS 384
>gi|347760101|ref|YP_004867662.1| Clp protease ATP-binding subunit [Gluconacetobacter xylinus NBRC
3288]
gi|347579071|dbj|BAK83292.1| Clp protease ATP-binding subunit [Gluconacetobacter xylinus NBRC
3288]
Length = 431
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 194/375 (51%), Positives = 259/375 (69%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EICK LD++VIGQ AKK AV+NHYKR+ H+ QK
Sbjct: 74 VPTPREICKILDDYVIGQAHAKKV---------------LSVAVHNHYKRLAHA--QKN- 115
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VE+ KSN++L+GPTGSGKTLLA+TLARI++VPF
Sbjct: 116 -----------------------ND--VEIAKSNIMLLGPTGSGKTLLAQTLARILDVPF 150
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 151 TMADATTLTEAGYVGEDVENIILKLLQAADYNVEKAQRGIVYIDEIDKISRKSDNPSITR 210
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ++LFICGGAF GL+K I
Sbjct: 211 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNMLFICGGAFAGLDKII 268
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + S IGFGA V++ D ++L V+ DL+ +GLIPEFIGR P++ +
Sbjct: 269 SARGKGSGIGFGADVQS-------PDERRMGAVLRDVEPEDLLKFGLIPEFIGRLPVVAT 321
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+++L +PKNAL +QY ++F M V+L FT+DALR IA++A+A+ TGARGLR
Sbjct: 322 LEDLDEAALIEILTKPKNALVKQYARLFQMEEVQLTFTEDALRQIAQRAIARRTGARGLR 381
Query: 431 ALLENILTEAMFEIP 445
A+LE+IL MF++P
Sbjct: 382 AILESILLTTMFDLP 396
>gi|227488330|ref|ZP_03918646.1| ATP-dependent protease ATP-binding subunit [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227091692|gb|EEI27004.1| ATP-dependent protease ATP-binding subunit [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 418
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 197/390 (50%), Positives = 262/390 (67%), Gaps = 50/390 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTPKEI + LDE+VIGQ+ AKK AVYNHYKR+
Sbjct: 63 LPTPKEIKEFLDEYVIGQDEAKKV---------------LSVAVYNHYKRVK-------- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ ++ GS D+ VEL+KSN+LL+GPTG GKT LA+TLA+ ++VPF
Sbjct: 100 ------LQNVFGS-----------DDGVELQKSNILLLGPTGCGKTYLAQTLAKKLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT+LT+AGYVGED E++L +LL AADFDV+ A+ GIVYIDE+DKI K E+ + R
Sbjct: 143 TIADATSLTEAGYVGEDVENILLRLLQAADFDVKKAEHGIVYIDEIDKITRKGENVSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV + IP G RKHP + I +DT +ILFI GAF GLEK I
Sbjct: 203 DVSGEGVQQALLKILEGTVAS--IPPQGGRKHPNQELIQVDTSNILFIASGAFAGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
ER S+GFGA +R+N + L +++L+ V DLV +GLIPEFIGR P+ +
Sbjct: 261 QERVGKKSLGFGADIRSN-------EELENANILQKVQPEDLVKFGLIPEFIGRLPVTAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
++ L++ LV VL EPKN+L +QY+KMFS ++ +L FTD AL IA+KA+A+ TGARGLR
Sbjct: 314 VNQLDKKALVSVLTEPKNSLVKQYQKMFSYDDTELVFTDGALGAIAEKALARKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVD 460
A++E IL M++IP ++ +++A +V+
Sbjct: 374 AIMEEILVPVMYDIPSREVSKVTIDAGVVN 403
>gi|345017120|ref|YP_004819473.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermoanaerobacter wiegelii Rt8.B1]
gi|344032463|gb|AEM78189.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermoanaerobacter wiegelii Rt8.B1]
Length = 424
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 194/378 (51%), Positives = 255/378 (67%), Gaps = 53/378 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LP PKEI + LD++VIGQE+AKK+ AVYNHYKRI
Sbjct: 59 ELPKPKEIKEFLDQYVIGQEKAKKA---------------LAVAVYNHYKRI-------- 95
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N ++ D+ VEL+KSN+LL+GPTGSGKTLLA+TLA+++NVP
Sbjct: 96 -------------------NSRIKPDD-VELQKSNILLLGPTGSGKTLLAQTLAKLLNVP 135
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E A++GI+YIDE+DKI K+E+ +
Sbjct: 136 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAEKGIIYIDEIDKIARKSENPSIT 195
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ NVP P G RKHP + I IDT +ILFICGGAF G+EK
Sbjct: 196 RDVSGEGVQQALLKILEGTIANVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFEGIEKI 253
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R S+GFGA V++ S +L + DL+ +G+IPEFIGR PI+V
Sbjct: 254 IESRIGKKSLGFGAEVQSRKEKD-------LSEILSHIMPQDLLKFGMIPEFIGRVPIVV 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L++D LV++L EPKNAL +QY+K+F ++ VKL F AL LIA A+ + TGARGL
Sbjct: 307 TLDPLSKDDLVRILTEPKNALTKQYEKLFELDGVKLEFDKKALGLIADMALERKTGARGL 366
Query: 430 RALLENILTEAMFEIPET 447
RA+LE I+ + M+EIP +
Sbjct: 367 RAILEEIMLDVMYEIPSS 384
>gi|118579612|ref|YP_900862.1| ATP-dependent protease ATP-binding subunit ClpX [Pelobacter
propionicus DSM 2379]
gi|166214798|sp|A1AN84.1|CLPX_PELPD RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|118502322|gb|ABK98804.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pelobacter
propionicus DSM 2379]
Length = 418
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 198/402 (49%), Positives = 263/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P+EI LDE+VIGQE+AKK AVYNHYKRI S+
Sbjct: 63 LPKPREIKDVLDEYVIGQEKAKKV---------------LSVAVYNHYKRIETSN----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G+ VE++KSN+LL+GPTGSGKTLLA+TLARI+ VPF
Sbjct: 103 ---------------KPGD--------VEMQKSNILLLGPTGSGKTLLAQTLARILKVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ LL AAD+DVE AQ+GI+YIDE+DKI K+ES + R
Sbjct: 140 AMADATNLTEAGYVGEDVENIILSLLQAADYDVERAQKGIIYIDEIDKIARKSESPSLTR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV + IP G RKHP+ + + +DT +ILFICGGAF GL+ I
Sbjct: 200 DVSGEGVQQALLKIIEGTVAS--IPPKGGRKHPQQEFMKVDTTNILFICGGAFAGLDSVI 257
Query: 311 SERRQDSSIGFGAPV--RANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
+R S+GFGA V RA + G LL +V DL+ YG IPEFIGR P+L
Sbjct: 258 QQRIGMKSLGFGADVKKRAEKKLG---------ELLLNVTPDDLLKYGYIPEFIGRLPML 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L+ L+ED +VQ+L EPKN+L +QY+K+F + NV+L FTD +L IA++A+ +NTGARG
Sbjct: 309 ATLTELDEDAMVQILKEPKNSLVKQYQKLFELENVRLRFTDGSLVAIAREALKRNTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LEN + + M+E+P +V V++ +E + + P
Sbjct: 369 LRSILENSMLDIMYEVP----SQPNVKEVVISEEVIYHKEKP 406
>gi|387773864|ref|ZP_10129149.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Haemophilus
parahaemolyticus HK385]
gi|386903685|gb|EIJ68492.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Haemophilus
parahaemolyticus HK385]
Length = 414
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 200/402 (49%), Positives = 256/402 (63%), Gaps = 54/402 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
++PTP E+ L+++VIGQE AKK AVYNHYKR+
Sbjct: 62 NVPTPHELHSHLNDYVIGQEHAKKV---------------LSVAVYNHYKRL-------- 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
KS N E VEL KSN+LL+GPTGSGKTLLA+TLAR +NVP
Sbjct: 99 ----------------KSALSNHEVTNGVELGKSNILLIGPTGSGKTLLAETLARRLNVP 142
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LTQAGYVGED E+V+ KLL DFD E A+RGIV+IDE+DKI K+ES +
Sbjct: 143 FAVADATTLTQAGYVGEDVENVIQKLLMKCDFDAEQAERGIVFIDEIDKITRKSESASIT 202
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV N I G RKHP+G+ IP+DT ILFICGGAF GL+K
Sbjct: 203 RDVSGEGVQQALLKLLEGTVAN--INPQGSRKHPKGETIPVDTSKILFICGGAFAGLDKI 260
Query: 310 ISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
+ R + IGF A ++ + LT+ L + V+ DLV +GLIPE IGR P++
Sbjct: 261 VESRTNKQGGIGFAAELKNDKDRQDLTE------LFKQVEPEDLVRFGLIPELIGRLPVV 314
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
L L+E+ L+Q+L EPKNA+ RQY+ +F M NV+L FT +AL IAKKA+A+ TGARG
Sbjct: 315 TPLQELDEEALIQILTEPKNAIIRQYQALFQMENVELEFTKEALVAIAKKAIARKTGARG 374
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++EN+L + M+++P T V+V KE V + P
Sbjct: 375 LRSIVENLLLDTMYDLP-----TLKAKKVIVSKECVERNEKP 411
>gi|451941813|ref|YP_007462450.1| ATP-dependent protease ATP-binding subunit ClpX [Bartonella
vinsonii subsp. berkhoffii str. Winnie]
gi|451901200|gb|AGF75662.1| ATP-dependent protease ATP-binding subunit ClpX [Bartonella
vinsonii subsp. berkhoffii str. Winnie]
Length = 424
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 201/411 (48%), Positives = 267/411 (64%), Gaps = 68/411 (16%)
Query: 36 EIMGGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKS 95
E+ IR++ +S+GI++ +PTP+EI LD++VIGQ+ AK+
Sbjct: 44 ELCMDIIREENKSSGIKARD---------------GVPTPQEIITVLDDYVIGQQHAKRV 88
Query: 96 HIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEN 155
AV+NHYKR+ H S KS N
Sbjct: 89 ---------------LSVAVHNHYKRLAHQS--------------------KS------N 107
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
D +EL KSN+LL+GPTG GKT LA+TLARI++VPFT+ DAT LT+AGYVGED E+++ K
Sbjct: 108 D--IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILK 165
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
LL AAD++VE AQRGIVYIDEVDKI KAE+ + RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQAADYNVERAQRGIVYIDEVDKISRKAENPSITRDVSGEGVQQALLKIMEGTIASVP- 224
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
P G RKHP+ + + +DT +ILFICGGAF GLE+ IS R + +SIGF A V+A
Sbjct: 225 PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA------- 276
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
D + ++ DL+ +GLIPEFIGR PI+ +L L+ LVQ+L +PKNAL +QY
Sbjct: 277 PDERCVGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVHALVQILSQPKNALVKQY 336
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP 445
+++F M NV+L F +DALR+IAKKA+ + TGARGLR+++E IL E MFE+P
Sbjct: 337 QRLFEMENVELAFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFELP 387
>gi|424795847|ref|ZP_18221655.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
translucens pv. graminis ART-Xtg29]
gi|433679139|ref|ZP_20510915.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
translucens pv. translucens DSM 18974]
gi|440731336|ref|ZP_20911361.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
translucens DAR61454]
gi|422795261|gb|EKU23984.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
translucens pv. graminis ART-Xtg29]
gi|430815743|emb|CCP41465.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
translucens pv. translucens DSM 18974]
gi|440373298|gb|ELQ10057.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
translucens DAR61454]
Length = 428
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 205/424 (48%), Positives = 272/424 (64%), Gaps = 62/424 (14%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E R+S LP PKEI + LD++VIGQ RAK++
Sbjct: 48 NDIIREELEEKAQSARSS-----LPKPKEILEVLDQYVIGQLRAKRT------------- 89
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKRI S QK NDE VEL KSN+LL
Sbjct: 90 --LAVAVYNHYKRI--ESRQK-------------------------NDE-VELAKSNILL 119
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DV+ AQ
Sbjct: 120 VGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAQ 179
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
+GIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ +
Sbjct: 180 QGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEF 237
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLES 346
+ +DTK+ILFICGGAF GL+K I +R D IGFGA V+++ R + +L
Sbjct: 238 LQVDTKNILFICGGAFAGLDKVIQQRSNDVGGIGFGAKVKSSERKREV------GKILAE 291
Query: 347 VDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLH 406
V+ DL+ +GLIPEF+GR P++ +L L+E L+++L EPKNA+ +Q+KK+F M V+L
Sbjct: 292 VEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIRILTEPKNAITKQFKKLFEMEGVELE 351
Query: 407 FTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
F DAL IAKKA+ + TGARGLR ++E++L + M+E+P +V+ V+VD+ +
Sbjct: 352 FRPDALLAIAKKALKRKTGARGLRTIVESVLLDTMYELP----SQENVSKVVVDESVIEH 407
Query: 467 VDAP 470
P
Sbjct: 408 KSEP 411
>gi|225019944|ref|ZP_03709136.1| hypothetical protein CLOSTMETH_03898 [Clostridium methylpentosum
DSM 5476]
gi|224947308|gb|EEG28517.1| hypothetical protein CLOSTMETH_03898 [Clostridium methylpentosum
DSM 5476]
Length = 425
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 198/397 (49%), Positives = 256/397 (64%), Gaps = 59/397 (14%)
Query: 75 PKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSD 134
P EI K LDE+VIGQ+ AK + AVYNHYKRI+ +
Sbjct: 77 PVEIKKVLDEYVIGQDAAK---------------VALSVAVYNHYKRIFAA--------- 112
Query: 135 HLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTIT 194
E VEL+KSNVLL+GPTG GKTLLA+TLA+I+ VPF I
Sbjct: 113 --------------------QQEGVELQKSNVLLLGPTGVGKTLLAQTLAKILEVPFAIA 152
Query: 195 DATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVS 253
DAT LT+AGYVGED E+VL +L+ AAD+DVEAA+RGI+YIDE+DKI K+E+ + RDVS
Sbjct: 153 DATTLTEAGYVGEDVENVLLRLIQAADYDVEAAERGIIYIDEIDKITRKSENVSITRDVS 212
Query: 254 GEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISER 313
GEGVQQALLK+LEGTV NVP P G RKHP D I IDTK+ILFICGGAF G+EK I+ R
Sbjct: 213 GEGVQQALLKILEGTVSNVP-PQGG-RKHPNQDFIQIDTKNILFICGGAFEGIEKVINRR 270
Query: 314 RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSA 373
S++GFGAP++ T + ++ ++ DLV +G+IPE +GR P++ +L
Sbjct: 271 MDTSAMGFGAPLKEKKDT-------TLAQAIKHIEPHDLVRFGMIPEIVGRIPVITALDD 323
Query: 374 LNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALL 433
L+ED LV++L EPKNAL +QY+ +F ++ L FTDDALR +A+ A+A+ TGARGLR +L
Sbjct: 324 LDEDSLVKILREPKNALLKQYQYLFELDGTTLEFTDDALRAVAQMAIARKTGARGLRGIL 383
Query: 434 ENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
E +L + MF +P K V++ KEAV P
Sbjct: 384 EGVLNDLMFRLPSEK-----ATRVVITKEAVEGTGEP 415
>gi|395792322|ref|ZP_10471760.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
vinsonii subsp. arupensis Pm136co]
gi|423714327|ref|ZP_17688586.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
vinsonii subsp. arupensis OK-94-513]
gi|395420711|gb|EJF86976.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
vinsonii subsp. arupensis OK-94-513]
gi|395432836|gb|EJF98811.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
vinsonii subsp. arupensis Pm136co]
Length = 424
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 196/386 (50%), Positives = 258/386 (66%), Gaps = 53/386 (13%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
N++ + +PTP+EI LD++VIGQ+ AK+ AV+NHYK
Sbjct: 54 NKSSGVKARDGVPTPQEIITVLDDYVIGQQHAKRV---------------LSVAVHNHYK 98
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
R+ H S KS ND +EL KSN+LL+GPTG GKT LA
Sbjct: 99 RLAHQS--------------------KS------ND--IELAKSNILLVGPTGCGKTYLA 130
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+TLARI++VPFT+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI
Sbjct: 131 QTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKI 190
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
KAE+ + RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT +ILFIC
Sbjct: 191 SRKAENPSITRDVSGEGVQQALLKIMEGTIASVP-PQGG-RKHPQQEFLQVDTTNILFIC 248
Query: 300 GGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIP 359
GGAF GLE+ IS R + +SIGF A V+A D + ++ DL+ +GLIP
Sbjct: 249 GGAFAGLERIISGRGEKTSIGFSATVKA-------PDERCVGEIFRDLEPEDLIKFGLIP 301
Query: 360 EFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKA 419
EFIGR PI+ +L L+ LVQ+L +PKNAL +QY+++F M NV+L F +DALR+IAKKA
Sbjct: 302 EFIGRLPIVATLEDLDVHALVQILSQPKNALVKQYQRLFEMENVELAFHEDALRVIAKKA 361
Query: 420 MAKNTGARGLRALLENILTEAMFEIP 445
+ + TGARGLR+++E IL E MFE+P
Sbjct: 362 IERKTGARGLRSIMEKILLETMFELP 387
>gi|357059571|ref|ZP_09120413.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Selenomonas
infelix ATCC 43532]
gi|355371648|gb|EHG18992.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Selenomonas
infelix ATCC 43532]
Length = 421
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 202/411 (49%), Positives = 264/411 (64%), Gaps = 61/411 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI LD++VIGQ+ AKKS AVYNHYKRI
Sbjct: 60 DVPKPKEIRHILDQYVIGQDEAKKS---------------LSVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N +E VEL+KSN+L++GPTGSGKTLLA+TLARI+NVP
Sbjct: 97 -------------------NVGQGKNEDVELKKSNILMIGPTGSGKTLLAQTLARILNVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E AQRGI+YIDE+DKI K+E+ +
Sbjct: 138 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAQRGIIYIDEIDKIARKSENPSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT +VP P G RKHP+ + + IDT +ILFICGGAF G+E+
Sbjct: 198 RDVSGEGVQQALLKILEGTTASVP-PQGG-RKHPQQELLQIDTTNILFICGGAFDGIEEI 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R +GFGA VR+ R L V S DL+ GLIPEFIGR P++V
Sbjct: 256 IESRLGKKQMGFGAEVRSKKRVS-------VGESLSKVISEDLMKNGLIPEFIGRLPVVV 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L++L+E+ LVQ+L EPKNAL +Q++K+ ++ V+L F D+AL LIAK+A+ TGARGL
Sbjct: 309 TLNSLDENALVQILTEPKNALVKQFQKLLELDGVRLAFDDEALHLIAKEALTHKTGARGL 368
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP-----GCGAK 475
R+++E I+ M+E+P + V A V K+ V + P G GA+
Sbjct: 369 RSIIEGIMRNVMYEVPSIQ----GVTACQVTKDVVANRSDPILTIDGTGAQ 415
>gi|225075808|ref|ZP_03719007.1| hypothetical protein NEIFLAOT_00824 [Neisseria flavescens
NRL30031/H210]
gi|224952841|gb|EEG34050.1| hypothetical protein NEIFLAOT_00824 [Neisseria flavescens
NRL30031/H210]
Length = 421
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 207/443 (46%), Positives = 273/443 (61%), Gaps = 65/443 (14%)
Query: 40 GFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFC 99
G + +D ES IE+E + N+E LPTP EI L++ VIGQE AKK+
Sbjct: 38 GMMLQDNESGEIENELAK---AKEENTEKK--LPTPAEIVANLNDHVIGQEHAKKA---- 88
Query: 100 ILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIV 159
+VYNHYKR+ H + + V
Sbjct: 89 -----------LAVSVYNHYKRLRHPKAEGK----------------------------V 109
Query: 160 ELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAA 219
EL KSN+LL+GPTGSGKTLLA++LAR ++VPF + DAT LT+AGYVGED E ++ KLL
Sbjct: 110 ELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLGK 169
Query: 220 ADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNG 278
DFDVE AQRGIVYIDE+DKI K+++ + RDVSGEGVQQALLK++EGTV +VP P G
Sbjct: 170 CDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG 228
Query: 279 PRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDAL 338
RKHP + I +DT +ILFICGGAF GLEK I +R + IGFGA V + +
Sbjct: 229 -RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSKDENADI---- 283
Query: 339 VTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMF 398
S+L E+V+ DL+ +GLIPE IGR P++ +L+ L+ED LV +L EPKNAL +QY+ +F
Sbjct: 284 --SALFETVEPEDLIKFGLIPELIGRLPVIATLAELDEDALVNILTEPKNALVKQYQTLF 341
Query: 399 SMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVL 458
M +V L F +DALR IAK AM + TGARGLR+++E L + M+ +P+ K V V+
Sbjct: 342 EMEDVGLEFEEDALRSIAKLAMERKTGARGLRSIVERCLLDTMYALPDLK----GVAKVV 397
Query: 459 VDKEAVGSVDAPGCGAKILHGDG 481
++KE V + P K+ DG
Sbjct: 398 INKEVVEKGEQP----KLFREDG 416
>gi|104781014|ref|YP_607512.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
entomophila L48]
gi|95110001|emb|CAK14706.1| ATP-dependent Clp protease ATP-binding subunit [Pseudomonas
entomophila L48]
Length = 442
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 80 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 118
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ + DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 119 --------------------DKKGDE-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 157
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 158 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 217
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 218 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 275
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 276 QNRSTKGGIGFSAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 329
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M +V L F DAL+ +A+KA+ + TGARGLR
Sbjct: 330 LDELDEAALMQILTEPKNALTKQYAKLFEMESVDLEFRSDALKAVARKALERKTGARGLR 389
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP K V+ V++D+ + P
Sbjct: 390 SILEGVLLDTMYEIPSQK----EVSKVVIDESVIEGTSQP 425
>gi|333368409|ref|ZP_08460608.1| ATP-dependent Clp protease ATP-binding subunit [Psychrobacter sp.
1501(2011)]
gi|332977274|gb|EGK14065.1| ATP-dependent Clp protease ATP-binding subunit [Psychrobacter sp.
1501(2011)]
Length = 425
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 199/428 (46%), Positives = 270/428 (63%), Gaps = 49/428 (11%)
Query: 44 KDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVD 103
+DG++N +E E N + LPTPKEI + LD +VIGQE AKK+
Sbjct: 43 EDGDANSVEGEDGEVNTWLTKK------LPTPKEIRQHLDSYVIGQETAKKA-------- 88
Query: 104 MLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEK 163
AVYNHYKR L V + L K +D +VEL K
Sbjct: 89 -------LSVAVYNHYKR--------------LKVAAKLADDRKQAKIGA-DDAMVELSK 126
Query: 164 SNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFD 223
SN+LL+GPTGSGKTLLA+TLAR+++VPF + DAT LT+AGYVGED E+++ KLL AAD+D
Sbjct: 127 SNILLIGPTGSGKTLLAQTLARMLDVPFAMADATTLTEAGYVGEDVENIVQKLLQAADYD 186
Query: 224 VEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKH 282
VE A++GI+Y+DE+DKI K E+ + RDVSGEGVQQALLK++EGTV IP +G RKH
Sbjct: 187 VERAEQGIIYVDEIDKISKKGENMSITRDVSGEGVQQALLKLIEGTV--AAIPPHGGRKH 244
Query: 283 PRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSS 342
P + I +DT +IL I GGAF GL+K I +R + S IGF A V++ LT+
Sbjct: 245 PNQELIQVDTSNILIIVGGAFSGLDKVIQQRTEKSGIGFNAEVKSKEDGKQLTE------ 298
Query: 343 LLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNN 402
L + V+ DL+ +GLIPE IGR P++ +L L+ED L+Q+L EPKNA+ +QY+ +F M +
Sbjct: 299 LFKQVEPEDLIKFGLIPELIGRLPVIATLEELDEDALMQILTEPKNAIIKQYQYLFEMED 358
Query: 403 VKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKE 462
+L FT++ L+ IA KAM + TGARGLR+++EN L + M+E+P S V+VD+
Sbjct: 359 AELTFTEEGLKAIAHKAMERKTGARGLRSIVENALLDTMYELP----SMSEAKTVVVDES 414
Query: 463 AVGSVDAP 470
+ P
Sbjct: 415 VINDGATP 422
>gi|254451899|ref|ZP_05065336.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Octadecabacter arcticus 238]
gi|198266305|gb|EDY90575.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Octadecabacter arcticus 238]
Length = 378
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 194/418 (46%), Positives = 274/418 (65%), Gaps = 65/418 (15%)
Query: 64 RNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIY 123
++SEG +PTP EIC+ LD++VIGQ AK+ AV+NHYKR+
Sbjct: 14 KSSEG---VPTPLEICQVLDDYVIGQRHAKRV---------------LSVAVHNHYKRLN 55
Query: 124 HSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTL 183
H+ + +EL KSN++L+GPTG GKTLLA+TL
Sbjct: 56 HA-----------------------------DKSDIELAKSNIMLIGPTGCGKTLLAQTL 86
Query: 184 ARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-K 242
ARI++VPFT+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K
Sbjct: 87 ARILDVPFTMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRK 146
Query: 243 AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGA 302
+++ + RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT +ILF+CGGA
Sbjct: 147 SDNPSITRDVSGEGVQQALLKIMEGTIASVP-PQGG-RKHPQQEFLQVDTTNILFVCGGA 204
Query: 303 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFI 362
F GL+K I++R + + +GFGA VR G + ++ DL+ +GLIPEF+
Sbjct: 205 FAGLDKIIAQRGKGAGMGFGAEVRGPDERG-------VGEIFSDLEPEDLLKFGLIPEFV 257
Query: 363 GRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAK 422
GR P++ +L L+ED LV +L +PKNAL +QY+++F + + KL FTDDAL IAK+A+ +
Sbjct: 258 GRLPVIATLEDLDEDALVTILSKPKNALVKQYQRLFELEDAKLTFTDDALVAIAKRAIER 317
Query: 423 NTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGD 480
TGARGLR+++E+IL + MFE+P G +V V+V++EAVG P ++H D
Sbjct: 318 KTGARGLRSIMEDILLDTMFELP----GMDTVTEVVVNEEAVG----PDAQPLMIHDD 367
>gi|346643098|ref|YP_261086.2| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
protegens Pf-5]
gi|341580245|gb|AAY93250.2| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
protegens Pf-5]
Length = 427
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 199/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+ Q++
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLN----QRDK 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
SD VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 106 KSDD-----------------------VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTKGGIGFNAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +AK+A+ + TGARGLR
Sbjct: 315 LDELDEAALIQILTEPKNALTKQYAKLFEMEGVDLEFRTDALKSVAKRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSEVSKVVIDESVIEGKSQP 410
>gi|348684952|gb|EGZ24767.1| hypothetical protein PHYSODRAFT_554819 [Phytophthora sojae]
Length = 703
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 187/309 (60%), Positives = 239/309 (77%), Gaps = 11/309 (3%)
Query: 157 EIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKL 216
E VEL+K+NV+L+GPTGSGKTLLAKTLAR+ VP I DAT LTQAGYVGED ESVL+KL
Sbjct: 372 EGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKL 431
Query: 217 LAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIP 275
AA++++EA QRGIVYIDE+DKI K+E+ + RDVSGEGVQQALLK+LEG++VNVP
Sbjct: 432 YQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVP-- 489
Query: 276 DNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLT 335
+ G RK+PRG+ I IDT +ILFICGGAF GLEK ++ R SSIGFGA + NMR L
Sbjct: 490 EKGGRKNPRGEYITIDTTNILFICGGAFAGLEKQVTRRTSRSSIGFGAQM-PNMR---LK 545
Query: 336 DALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYK 395
D+ LL + DLV+YGLIPEFIGRFP+LVS + L++D+LVQVL EPKN+L RQYK
Sbjct: 546 DSDQIGQLLSQAEPEDLVSYGLIPEFIGRFPMLVSTTGLSKDELVQVLTEPKNSLVRQYK 605
Query: 396 KMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVN 455
+F++++V+ H T+ AL +A+ A++KNTGARGLR++ E L E MF++P+ + V
Sbjct: 606 ALFALSDVEFHATEGALEAVAESALSKNTGARGLRSIFERALMETMFDLPD----MNDVR 661
Query: 456 AVLVDKEAV 464
AV VD+EA+
Sbjct: 662 AVYVDEEAI 670
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 15/85 (17%)
Query: 39 GGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIF 98
GG + DGE + +E+ + + TP+EI +GL+E+VIGQ++ KK+
Sbjct: 198 GGRMTADGEYEKLANEALFGGAAATDATVTKDRVLTPREIYEGLNEYVIGQDKVKKT--- 254
Query: 99 CILVDMLVYVIGACCAVYNHYKRIY 123
V+NHYKR++
Sbjct: 255 ------------LAVGVHNHYKRLH 267
>gi|218247704|ref|YP_002373075.1| ATP-dependent protease ATP-binding subunit ClpX [Cyanothece sp. PCC
8801]
gi|257060959|ref|YP_003138847.1| ATP-dependent protease ATP-binding subunit ClpX [Cyanothece sp. PCC
8802]
gi|226706582|sp|B7JW74.1|CLPX_CYAP8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|218168182|gb|ACK66919.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cyanothece
sp. PCC 8801]
gi|256591125|gb|ACV02012.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cyanothece
sp. PCC 8802]
Length = 448
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 195/395 (49%), Positives = 256/395 (64%), Gaps = 51/395 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P P+EI K LDE+VIGQ+ AKK AVYNHYKR+ +S E
Sbjct: 82 IPKPREIKKYLDEYVIGQDEAKKV---------------LSVAVYNHYKRLSLASKPGEE 126
Query: 132 VS-DHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
S DH +EL+KSN+LLMGPTGSGKTLLA+TLA+I++VP
Sbjct: 127 TSEDH-----------------------IELQKSNILLMGPTGSGKTLLAQTLAQILDVP 163
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LT+AGYVGED E++L +LL AD DVE AQRGI+YIDE+DKI K+E+ +
Sbjct: 164 FAVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSIT 223
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLKMLEGT+ NVP P G RKHP D I IDT +ILFICGGAFVGL+K
Sbjct: 224 RDVSGEGVQQALLKMLEGTIANVP-PQGG-RKHPYQDCIQIDTSNILFICGGAFVGLDKV 281
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I +RR S+GF P N + + L++ + DLV +G+IPEF+GR P++
Sbjct: 282 IEQRRGKKSMGFIRPGDTNQ-----SKEKRAADLMQQAEPDDLVKFGMIPEFVGRIPVMA 336
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SL L+E+ L+ +L +P+NAL +QY+K+ M+NV+L F DA+R IA++A + TGAR L
Sbjct: 337 SLEPLDEETLIAILTQPRNALVKQYQKLLKMDNVQLEFNKDAVRAIAQEAYRRKTGARAL 396
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
R ++E ++ + M+E+P K V L+ KE V
Sbjct: 397 RGIVEELMLDVMYELPSRK----DVQRCLITKEMV 427
>gi|110803718|ref|YP_698703.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
perfringens SM101]
gi|123341787|sp|Q0ST54.1|CLPX_CLOPS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|110684219|gb|ABG87589.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens SM101]
Length = 435
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 199/396 (50%), Positives = 261/396 (65%), Gaps = 56/396 (14%)
Query: 51 IESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIG 110
IE E E GN + +LP P+EI LD++V+GQ+RAKKS
Sbjct: 45 IEDEFE---GNTESSPLETSNLPKPQEIKDYLDQYVVGQDRAKKS--------------- 86
Query: 111 ACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMG 170
AVYNHYKRI N N D+ VEL+KSN+LL+G
Sbjct: 87 LAVAVYNHYKRI---------------------------NANKAEDD-VELQKSNILLLG 118
Query: 171 PTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRG 230
PTGSGKTLLA+TLA+++NVPF I DAT LT+AGYVGED E++L KL+ AD+DVE A++G
Sbjct: 119 PTGSGKTLLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLKLIQNADYDVERAEKG 178
Query: 231 IVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIP 289
I+YIDE+DKI K+E+ + RDVSGEGVQQALLK+LEGT +VP P G RKHP + I
Sbjct: 179 IIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTTASVP-PQGG-RKHPHQEFIQ 236
Query: 290 IDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDS 349
I+T +ILFICGGAF G++K I +R SSIGFGA V+ LL+ +
Sbjct: 237 INTSNILFICGGAFDGIDKIIEKRGTKSSIGFGAEVKGKSEKN-------VGELLKDIMP 289
Query: 350 GDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTD 409
GDL+ +GLIPEF+GR P+LV+L AL+ + LV +L +PKNAL +QYKK+F ++NVKL FT+
Sbjct: 290 GDLLKFGLIPEFVGRLPVLVTLEALDNEALVSILTKPKNALVKQYKKLFELDNVKLDFTE 349
Query: 410 DALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP 445
+AL+ IA +A+ + TGARGLRA++E + + MF+IP
Sbjct: 350 EALKAIADEAINRKTGARGLRAIVEETMMDIMFDIP 385
>gi|229591361|ref|YP_002873480.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
fluorescens SBW25]
gi|388466303|ref|ZP_10140513.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
synxantha BG33R]
gi|440741132|ref|ZP_20920587.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
fluorescens BRIP34879]
gi|447917343|ref|YP_007397911.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas poae
RE*1-1-14]
gi|259491265|sp|C3JYJ9.1|CLPX_PSEFS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|229363227|emb|CAY50310.1| ATP-dependent specificity component of clpP serine protease,
chaperone [Pseudomonas fluorescens SBW25]
gi|388009883|gb|EIK71070.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
synxantha BG33R]
gi|440373753|gb|ELQ10501.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
fluorescens BRIP34879]
gi|445201206|gb|AGE26415.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas poae
RE*1-1-14]
Length = 427
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ + DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKGDE-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QQRSTRGGIGFSAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +AK+A+ + TGARGLR
Sbjct: 315 LDELDEAALIQILTEPKNALTKQYAKLFEMEGVDLEFRTDALKSVAKRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSEVSKVVIDESVIEGKSKP 410
>gi|408481158|ref|ZP_11187377.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
R81]
Length = 427
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ + DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKGDE-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QQRSTRGGIGFSAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +AK+A+ + TGARGLR
Sbjct: 315 LDELDEAALIQILTEPKNALTKQYAKLFEMEGVDLEFRTDALKSVAKRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSEVSKVVIDESVIEGKSKP 410
>gi|225573067|ref|ZP_03781822.1| hypothetical protein RUMHYD_01258 [Blautia hydrogenotrophica DSM
10507]
gi|225039573|gb|EEG49819.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Blautia
hydrogenotrophica DSM 10507]
Length = 432
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 195/403 (48%), Positives = 265/403 (65%), Gaps = 58/403 (14%)
Query: 69 NIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQ 128
+I+L TP+EI LDE+VIGQ+ AKK+ AVYNHYKR+
Sbjct: 61 DINLMTPQEIHNFLDEYVIGQDEAKKA---------------LSVAVYNHYKRVM----- 100
Query: 129 KELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVN 188
KS + VEL+KSN+L++GPTGSGKTLLA+TLA+++N
Sbjct: 101 ----------------APKSLD--------VELQKSNILMLGPTGSGKTLLAQTLAKLLN 136
Query: 189 VPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRN 247
VPF I DAT LT+AGYVGED E++L K++ AAD+D+E AQ GI+YIDE+DKI K+E+ +
Sbjct: 137 VPFAIADATTLTEAGYVGEDVENILLKIIQAADYDIERAQYGIIYIDEIDKITRKSENAS 196
Query: 248 NGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLE 307
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFICGGAF GLE
Sbjct: 197 ITRDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFEGLE 254
Query: 308 KTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPI 367
K I+ R+ SIGFGA VR+ LL V D + +GLIPEFIGR P+
Sbjct: 255 KIIATRKDQKSIGFGADVRSAKEHN-------VGELLREVMPEDFIKFGLIPEFIGRVPV 307
Query: 368 LVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGAR 427
+VSL+AL+E+ L+++L EPKN+L +QY+K+F ++ V+L F DAL+LIA+K++ + TGAR
Sbjct: 308 VVSLNALDEEALIRILQEPKNSLVKQYRKLFELDGVELDFQKDALKLIAEKSLERKTGAR 367
Query: 428 GLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
GLR+++E+ + + M+++P ++ ++ KEAV P
Sbjct: 368 GLRSIMESTMMDLMYQVP----SDHTIQKCVITKEAVEGTAEP 406
>gi|357031708|ref|ZP_09093651.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconobacter
morbifer G707]
gi|356414938|gb|EHH68582.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconobacter
morbifer G707]
Length = 422
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 198/394 (50%), Positives = 271/394 (68%), Gaps = 61/394 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEICK LD++VIGQ AK++ AV+NHYKR+ H+
Sbjct: 63 VPTPKEICKVLDDYVIGQFEAKRA---------------LSVAVHNHYKRLSHAG----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KS ND +E+ KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 103 ---------------KS------ND--IEIAKSNILLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++V+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVDRAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ++LFICGGAF GL+K I
Sbjct: 200 DVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNMLFICGGAFSGLDKII 257
Query: 311 SERRQDSSIGFGAPVRAN--MRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
R + S IGFGA VR++ R G ++L+SV+ DL+ +GLIPEFIGR P++
Sbjct: 258 VARGKGSGIGFGADVRSDEERRLG---------AILQSVEPEDLLKFGLIPEFIGRLPVI 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L+ L+E L+Q+L +PKNAL +QY ++F M VKL FT+DAL IAK+A+ + TGARG
Sbjct: 309 AALNDLDEAALIQILSKPKNALVKQYARLFEMEGVKLTFTEDALVAIAKRAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKE 462
LR+++E+IL + MF++P G V V+++K+
Sbjct: 369 LRSIMESILLDTMFDLP----GLEGVEEVVINKD 398
>gi|126727091|ref|ZP_01742928.1| ATP-dependent protease ATP-binding subunit [Rhodobacterales
bacterium HTCC2150]
gi|126703519|gb|EBA02615.1| ATP-dependent protease ATP-binding subunit [Rhodobacterales
bacterium HTCC2150]
Length = 423
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 192/400 (48%), Positives = 268/400 (67%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEIC+ LD++VIGQ AK+ AV+NHYKR+ H+ E
Sbjct: 63 VPTPKEICEVLDDYVIGQGHAKRV---------------LSVAVHNHYKRLNHAGKGSE- 106
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+EL KSN++L+GPTG GKTLLA+TLARI++VPF
Sbjct: 107 ---------------------------IELAKSNIMLIGPTGCGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILF+CGGAF GL+K I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFVCGGAFAGLDKII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
++R + SSIGFGA VR G L+ ++ DL+ +GLIPEF+GR P++ +
Sbjct: 258 AQRGKGSSIGFGADVRDEATKG-------IGETLKDLEPEDLLKFGLIPEFVGRLPVIAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ D LV +L EPKNAL +QY+++F + + +L FTDDAL+ I +A+ + TGARGLR
Sbjct: 311 LEDLDLDALVTILSEPKNALVKQYQRLFELEDAELKFTDDALKAIGSRAIERKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+++E+IL + MF++P G +V+ V+V++EAV + AP
Sbjct: 371 SIMEDILLDTMFDLP----GLENVSEVVVNEEAVNAGAAP 406
>gi|301091465|ref|XP_002895917.1| ATP-dependent Clp protease ATP-binding subunit clpX, putative
[Phytophthora infestans T30-4]
gi|262096081|gb|EEY54133.1| ATP-dependent Clp protease ATP-binding subunit clpX, putative
[Phytophthora infestans T30-4]
Length = 705
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 187/309 (60%), Positives = 239/309 (77%), Gaps = 11/309 (3%)
Query: 157 EIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKL 216
E VEL+K+NV+L+GPTGSGKTLLAKTLAR+ VP I DAT LTQAGYVGED ESVL+KL
Sbjct: 374 EGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKL 433
Query: 217 LAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIP 275
AA++++EA QRGIVYIDE+DKI K+E+ + RDVSGEGVQQALLK+LEG++VNVP
Sbjct: 434 YQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVP-- 491
Query: 276 DNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLT 335
+ G RK+PRG++I IDT +ILFICGGAF GLEK ++ R SSIGFGA + NMR L
Sbjct: 492 EKGGRKNPRGEHITIDTTNILFICGGAFAGLEKQVTRRTSRSSIGFGAQM-PNMR---LK 547
Query: 336 DALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYK 395
D+ LL + DLV+YGLIPEFIGRFP+LVS + L++D+LVQVL EPKN+L RQYK
Sbjct: 548 DSNQIGQLLSQAEPEDLVSYGLIPEFIGRFPMLVSTTGLSKDELVQVLNEPKNSLVRQYK 607
Query: 396 KMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVN 455
+F++++V+ H T+ AL +A+ A+ KNTGARGLR++ E L E MF++P+ + V
Sbjct: 608 ALFALSDVEFHATEGALEAVAESALRKNTGARGLRSIFERALMETMFDLPD----MNDVR 663
Query: 456 AVLVDKEAV 464
AV VD+EA+
Sbjct: 664 AVYVDEEAI 672
>gi|134302068|ref|YP_001122037.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis WY96-3418]
gi|421751882|ref|ZP_16188919.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis AS_713]
gi|421753737|ref|ZP_16190726.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 831]
gi|421757463|ref|ZP_16194343.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 80700103]
gi|421759320|ref|ZP_16196153.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 70102010]
gi|424674638|ref|ZP_18111554.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 70001275]
gi|134049845|gb|ABO46916.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis WY96-3418]
gi|409086419|gb|EKM86538.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 831]
gi|409086609|gb|EKM86725.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis AS_713]
gi|409091046|gb|EKM91051.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 70102010]
gi|409092551|gb|EKM92522.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 80700103]
gi|417434682|gb|EKT89624.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 70001275]
Length = 417
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 194/378 (51%), Positives = 244/378 (64%), Gaps = 51/378 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI K LD+++IGQ+ AKK AVYNHYKRI
Sbjct: 56 LPKPVEIKKYLDDYIIGQDNAKKV---------------LSVAVYNHYKRI--------- 91
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N+ D+ EL+KSNVLL+GPTGSGKTL A+TL +++NVPF
Sbjct: 92 ------------------TSNLTKDDDTELKKSNVLLIGPTGSGKTLFAQTLVKLLNVPF 133
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVG+D E+++ +LL ADFDV AQ+GI+YIDE+DKI K+ES + R
Sbjct: 134 AIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKSESTSITR 193
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP D I +DT DILFICGGAF G+EK I
Sbjct: 194 DVSGEGVQQALLKLIEGTVSSVP-PKGG-RKHPNQDMIQVDTSDILFICGGAFAGIEKVI 251
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R SIGF A V ++L + L++ ++S DL +GLIPE IGR PI+
Sbjct: 252 KHRMDKVSIGFNADVIQQ------KNSLDSDKLMQKIESEDLTRFGLIPELIGRLPIVTV 305
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L E+ LV++L EPKNAL +QY K+F +NV + FTD AL IAKKA+ K TGARGLR
Sbjct: 306 LNELKEEDLVRILTEPKNALIKQYIKLFKFDNVNIEFTDQALVEIAKKAITKKTGARGLR 365
Query: 431 ALLENILTEAMFEIPETK 448
+LEN+L E MF IP ++
Sbjct: 366 TILENVLLEVMFHIPSSE 383
>gi|395787475|ref|ZP_10467076.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
birtlesii LL-WM9]
gi|395411899|gb|EJF78420.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
birtlesii LL-WM9]
Length = 424
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 200/411 (48%), Positives = 268/411 (65%), Gaps = 68/411 (16%)
Query: 36 EIMGGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKS 95
E+ IR++ +S+GI++ +PTP+EI LD++VIGQ+ AK+
Sbjct: 44 ELCMDIIREENKSSGIKARD---------------GVPTPQEIITVLDDYVIGQQHAKRV 88
Query: 96 HIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEN 155
AV+NHYKR+ H S KS N
Sbjct: 89 ---------------LSVAVHNHYKRLVHQS--------------------KS------N 107
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
D +EL KSN+LL+GPTG GKT LA+TLARI++VPFT+ DAT LT+AGYVGED E+++ K
Sbjct: 108 D--IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILK 165
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
LL AAD++VE AQRGIVYIDEVDKI KA++ + RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQAADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVP- 224
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
P G RKHP+ + + +DT +ILFICGGAF GLE+ IS R + +SIGF A V+A
Sbjct: 225 PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA------- 276
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
D + ++ DL+ +GLIPEFIGR PI+ +L L+ + LVQ+L +PKNAL +QY
Sbjct: 277 PDERCVGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALVQILSQPKNALVKQY 336
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP 445
+++F M NV+L F +DALR+IAKKA+ + TGARGLR+++E IL E MFE+P
Sbjct: 337 QRLFEMENVELTFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFELP 387
>gi|51595310|ref|YP_069501.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
pseudotuberculosis IP 32953]
gi|61211451|sp|Q66DT3.1|CLPX_YERPS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|51588592|emb|CAH20200.1| specificity component of clpA-clpP ATP-dependent serine protease,
chaperone [Yersinia pseudotuberculosis IP 32953]
Length = 423
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 202/422 (47%), Positives = 269/422 (63%), Gaps = 62/422 (14%)
Query: 51 IESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIG 110
I E + + +R+R+S LPTP EI LD++VIGQE AKK
Sbjct: 48 IREEIKEVSPHRDRSS-----LPTPHEIRHHLDDYVIGQEPAKKV--------------- 87
Query: 111 ACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMG 170
AVYNHYKR+ N + +EL KSN+LL+G
Sbjct: 88 LAVAVYNHYKRLR----------------------------NGDTSNGIELGKSNILLIG 119
Query: 171 PTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRG 230
PTGSGKTLLA+TLAR+++VPFT+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRG
Sbjct: 120 PTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRG 179
Query: 231 IVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIP 289
IVYIDE+DKI K+++ + RDVSGEGVQQALLK++EGT+ VP P G RKHP+ + +
Sbjct: 180 IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQ 237
Query: 290 IDTKDILFICGGAFVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVD 348
+DT ILFICGGAF GL+K I +R S IGFGA V+ G ++ LL V+
Sbjct: 238 VDTSKILFICGGAFAGLDKVIGQRINTGSGIGFGAVVK------GQSEKATEGELLSQVE 291
Query: 349 SGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFT 408
DL+ +GLIPEFIGR P++ +LS L+ED L+Q+L EPKNAL +QY+ +FS+ V+L F
Sbjct: 292 PEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFSLEGVELEFR 351
Query: 409 DDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVD 468
D+AL IAKKAMA+ TGARGLR+++E +L + M+++P SV V+VD+ +
Sbjct: 352 DEALTAIAKKAMARKTGARGLRSIVEGVLLDTMYDLP----SMDSVEKVVVDESVIAGQS 407
Query: 469 AP 470
AP
Sbjct: 408 AP 409
>gi|354593925|ref|ZP_09011968.1| clp protease ATP-binding subunit ClpX [Commensalibacter intestini
A911]
gi|353673036|gb|EHD14732.1| clp protease ATP-binding subunit ClpX [Commensalibacter intestini
A911]
Length = 419
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 197/411 (47%), Positives = 271/411 (65%), Gaps = 57/411 (13%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
N+ + ++ LPTPKEICK LD++VIGQ AKK AV+NHYK
Sbjct: 51 NKTQINKDQSSLPTPKEICKILDDYVIGQGDAKKV---------------LSVAVHNHYK 95
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
R+ + K+G+ VE+ KSN++L+GPTG+GKTLLA
Sbjct: 96 RLNQAD--------------------KAGD--------VEIAKSNIMLIGPTGTGKTLLA 127
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+TLARI++VPFT+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGI+YIDE+DKI
Sbjct: 128 QTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIIYIDEIDKI 187
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ++LFIC
Sbjct: 188 SRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNMLFIC 245
Query: 300 GGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIP 359
GGAF GL+K IS R IGFGA V++ D +L ++S DL+ +GLIP
Sbjct: 246 GGAFAGLDKIISARSVGYGIGFGAEVQS-------ADDHNIGALFRQLESEDLMKFGLIP 298
Query: 360 EFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKA 419
EFIGR P++ +L L+++ LVQ+L EPKNAL +QY+K+F M NV+L F D+A+ IA KA
Sbjct: 299 EFIGRLPVIATLDDLDQEALVQILKEPKNALVKQYQKLFEMENVQLTFEDEAVEEIANKA 358
Query: 420 MAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+ + TGARGLR++LE IL MFE+P+ + V+ V+V+K+ + P
Sbjct: 359 IERRTGARGLRSILETILLSTMFELPD----LNDVSEVIVNKDVINRKAEP 405
>gi|307544937|ref|YP_003897416.1| ATP-dependent protease ATP-binding subunit [Halomonas elongata DSM
2581]
gi|307216961|emb|CBV42231.1| ATP-dependent protease ATP-binding subunit [Halomonas elongata DSM
2581]
Length = 425
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 264/400 (66%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P+EI LD++VIGQ+RAK M++ V AVYNHYKR+ + +
Sbjct: 65 LPAPREIRHTLDDYVIGQDRAK----------MVLSV-----AVYNHYKRLRYGA----- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 105 -----------------------KDE-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT VP P G RKHP+ + + +DT ++LFI GGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTTAQVP-PQGG-RKHPQQEFLQVDTTNMLFIVGGAFAGLDKVI 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + IGF A V+ T G+ D LL V+ DLV +GLIPEF+GR P++ +
Sbjct: 259 RDRAEKGGIGFNAEVKTKDETKGVGD------LLLDVEPEDLVKFGLIPEFVGRLPVIAT 312
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L ED L+Q+L EPKN+L +QY ++F M V+L F +DALR +A KAMA+NTGARGLR
Sbjct: 313 LTELTEDALIQILTEPKNSLIKQYARLFDMEGVELDFREDALRAVAAKAMARNTGARGLR 372
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE++L + M+EIP + V+ V++D + + P
Sbjct: 373 SILESVLLDTMYEIPSIE----GVSKVVIDASVIANESEP 408
>gi|395782018|ref|ZP_10462427.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
rattimassiliensis 15908]
gi|395419869|gb|EJF86155.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
rattimassiliensis 15908]
Length = 424
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 194/375 (51%), Positives = 255/375 (68%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI LD++VIGQ+ AK+ AV+NHYKR+ H S
Sbjct: 65 VPTPQEIITVLDDYVIGQQHAKRV---------------LSVAVHNHYKRLAHQS----- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KS ND +EL KSN+LL+GPTG GKT LA+TLARI++VPF
Sbjct: 105 ---------------KS------ND--IELAKSNILLVGPTGCGKTYLAQTLARIIDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI KA++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKADNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT +ILFICGGAF GLE+ I
Sbjct: 202 DVSGEGVQQALLKIMEGTIASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERII 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGF A V+A D + ++ DL+ +GLIPEFIGR PI+ +
Sbjct: 260 SGRGEKTSIGFSATVKA-------PDERCVGEIFRDLEPEDLIKFGLIPEFIGRLPIVAT 312
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ + LVQ+L +PKNAL +QY+++F M NV+L F +DALR+IAKKA+ + TGARGLR
Sbjct: 313 LEDLDVNALVQILSQPKNALVKQYQRLFEMENVELAFHEDALRVIAKKAIERKTGARGLR 372
Query: 431 ALLENILTEAMFEIP 445
+++E IL E MFE+P
Sbjct: 373 SIMEKILLETMFELP 387
>gi|126732555|ref|ZP_01748353.1| ATP-dependent protease ATP-binding subunit [Sagittula stellata
E-37]
gi|126707001|gb|EBA06069.1| ATP-dependent protease ATP-binding subunit [Sagittula stellata
E-37]
Length = 421
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 190/375 (50%), Positives = 256/375 (68%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EIC+ LD++VIGQ +AK+ AV+NHYKR+ HS
Sbjct: 63 VPTPREICEVLDDYVIGQMKAKRV---------------LSVAVHNHYKRLNHSQ----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KS + +EL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ---------------KSSD--------IELAKSNILLIGPTGCGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K+E+ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL++ I
Sbjct: 200 DVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDRII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
++R + S++GFGA VR N G + ++ DL+ +GLIPEF+GR P++ +
Sbjct: 258 AQRGKGSAMGFGADVRDNDDRG-------VGEIFRDLEPEDLLKFGLIPEFVGRLPVVAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED LV +L +PKNAL +QY+++F M + L FTDDAL IAKKA+ + TGARGLR
Sbjct: 311 LEDLDEDALVTILTQPKNALVKQYQRLFEMEDTDLTFTDDALSAIAKKAIQRKTGARGLR 370
Query: 431 ALLENILTEAMFEIP 445
++LE IL + MFE+P
Sbjct: 371 SILEGILLDTMFELP 385
>gi|187933551|ref|YP_001887075.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum B str. Eklund 17B]
gi|238691649|sp|B2TPB8.1|CLPX_CLOBB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|187721704|gb|ACD22925.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum B str. Eklund 17B]
Length = 429
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 196/400 (49%), Positives = 262/400 (65%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P P EI + LD +VIGQERAKKS AVYNHYKRI
Sbjct: 60 VPKPNEIKQYLDSYVIGQERAKKS---------------LSVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N N + D VEL KSN+LL+GPTGSGKTLLA+TLA+++NVPF
Sbjct: 96 ------------------NTN-KQDTDVELSKSNILLLGPTGSGKTLLAQTLAKVLNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ AD+DVE A+RGI+YIDE+DKI K+E+ + R
Sbjct: 137 AIADATTLTEAGYVGEDVENILLKLIQNADYDVERAERGIIYIDEIDKIARKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV +VP P G RKHP + I I+T +ILFICGGAF G++K I
Sbjct: 197 DVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQINTSNILFICGGAFDGVDKII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R + SS+GFGA ++ LL+ + GDL+ +GLIPEF+GR PILV+
Sbjct: 255 ENRTRKSSMGFGAQIQGKHEKD-------IGKLLKEIMPGDLLKFGLIPEFVGRLPILVT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L +L++D L+ +L +PKNAL +QYKK+F +++V+L F ++AL IA++A+ + TGARGLR
Sbjct: 308 LESLDKDALINILTKPKNALVKQYKKLFELDDVELEFNNEALTSIAEEAIERKTGARGLR 367
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
A++E ++TE M+EIP + V + +E + + P
Sbjct: 368 AIIEEMMTEIMYEIP----SDEQITKVTITEECIKDKENP 403
>gi|312113124|ref|YP_004010720.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rhodomicrobium
vannielii ATCC 17100]
gi|311218253|gb|ADP69621.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodomicrobium vannielii ATCC 17100]
Length = 422
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 196/389 (50%), Positives = 263/389 (67%), Gaps = 53/389 (13%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
N+N + +PTP+EIC LD++VIGQ+ AK+ AV+NHYK
Sbjct: 53 NKNSYVKSRDGVPTPQEICTVLDDYVIGQDYAKRV---------------LSVAVHNHYK 97
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
RI HS+ ND VEL KSN+LL+GPTG GKTLLA
Sbjct: 98 RINHSAKN--------------------------ND--VELAKSNILLIGPTGCGKTLLA 129
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+TLARI++VPFT+ DAT LT+AGYVGED E+++ KLL AAD++V+ AQRGIVYIDEVDKI
Sbjct: 130 QTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQAADYNVDRAQRGIVYIDEVDKI 189
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFIC
Sbjct: 190 SRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFIC 247
Query: 300 GGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIP 359
GGAF GLEK I++R + SSIGFGA V + D T +L V+ DL+ +GLIP
Sbjct: 248 GGAFSGLEKIIAQRGKSSSIGFGAKVTSE-------DDRRTGEILRGVEPEDLLRFGLIP 300
Query: 360 EFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKA 419
EFIGR P+L +L L+E LV++L EPKNAL +QY+++F M V+L +++AL+ +A+KA
Sbjct: 301 EFIGRLPVLATLEDLDEVALVKILSEPKNALVKQYQRLFDMEGVQLTLSNEALKSVARKA 360
Query: 420 MAKNTGARGLRALLENILTEAMFEIPETK 448
+ + TGARGLR+++E IL ++MFE+P K
Sbjct: 361 IERKTGARGLRSIMEAILLDSMFELPSLK 389
>gi|429737529|ref|ZP_19271387.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Selenomonas
sp. oral taxon 138 str. F0429]
gi|429152335|gb|EKX95165.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Selenomonas
sp. oral taxon 138 str. F0429]
Length = 421
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 258/401 (64%), Gaps = 56/401 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI LD++VIGQ+ AKKS AVYNHYKRI
Sbjct: 60 DVPKPKEIRHILDQYVIGQDEAKKS---------------LSVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N E VEL KSN+L++GPTGSGKTLLA+TLARI+NVP
Sbjct: 97 -------------------NVGQGKSEDVELRKSNILMLGPTGSGKTLLAQTLARILNVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E AQRGI+YIDE+DKI K+E+ +
Sbjct: 138 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAQRGIIYIDEIDKIARKSENPSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT +VP P G RKHP+ + + IDT +ILFICGGAF G+E+
Sbjct: 198 RDVSGEGVQQALLKILEGTTASVP-PQGG-RKHPQQELLQIDTTNILFICGGAFDGIEEI 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R +GFGA VR+ R + L V DL+ GLIPEFIGR P++V
Sbjct: 256 IESRLGKKQMGFGAEVRSKKR-------ISVGESLSKVIPEDLMKNGLIPEFIGRLPVVV 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L++L+ED LV++L EPKNAL +Q++K+ ++ V+L F DDAL LIAK+A+ TGARGL
Sbjct: 309 TLNSLDEDALVRILTEPKNALVKQFQKLLELDGVRLTFEDDALHLIAKEALTHKTGARGL 368
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E I+ M+E+P + V A V KE + + P
Sbjct: 369 RSIIEGIMRNVMYEVPSIQ----GVTACQVTKEVIANHSDP 405
>gi|312961788|ref|ZP_07776286.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens WH6]
gi|311284047|gb|EFQ62630.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens WH6]
Length = 438
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 76 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 114
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ + DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 115 --------------------DKKGDE-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 153
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 154 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 213
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 214 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 271
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 272 QQRSTRGGIGFSAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 325
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +AK+A+ + TGARGLR
Sbjct: 326 LDELDEAALIQILTEPKNALTKQYAKLFEMEGVDLEFRTDALKSVAKRALERKTGARGLR 385
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 386 SILEGVLLDTMYEIP----SQSEVSKVVIDESVIEGKSKP 421
>gi|254876857|ref|ZP_05249567.1| ATP-dependent protease ATP-binding subunit [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254842878|gb|EET21292.1| ATP-dependent protease ATP-binding subunit [Francisella
philomiragia subsp. philomiragia ATCC 25015]
Length = 417
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 194/377 (51%), Positives = 245/377 (64%), Gaps = 51/377 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI K LD+++IGQ+ AKK AVYNHYKRI
Sbjct: 56 LPKPIEIKKYLDDYIIGQDNAKKV---------------LSVAVYNHYKRI--------- 91
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N D+ EL+KSNVLL+GPTGSGKTL A+TLA+++NVPF
Sbjct: 92 ------------------TSNTTKDDDTELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPF 133
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVG+D E+++ +LL ADFDV AQ+GI+YIDE+DKI K+ES + R
Sbjct: 134 AIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKSESASITR 193
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP D I +DT DILFICGGAF G+EK +
Sbjct: 194 DVSGEGVQQALLKLIEGTVSSVP-PKGG-RKHPNQDMIQVDTSDILFICGGAFAGIEKVV 251
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R SIGF A V ++L T L++ V+S DL +GLIPE IGR PI+
Sbjct: 252 KHRMDKVSIGFNADVIQQ------KNSLDTEKLMQKVESEDLTRFGLIPELIGRLPIVTV 305
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L E+ LV++L EPKNAL +QY K+F ++V + F+D+AL IAKKA+AK TGARGLR
Sbjct: 306 LNELKEEDLVKILTEPKNALIKQYVKLFKFDDVAIEFSDEALVEIAKKAIAKKTGARGLR 365
Query: 431 ALLENILTEAMFEIPET 447
+LEN+L E MF +P +
Sbjct: 366 TILENVLLEVMFHVPSS 382
>gi|254469906|ref|ZP_05083311.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudovibrio
sp. JE062]
gi|374331791|ref|YP_005081975.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudovibrio
sp. FO-BEG1]
gi|211961741|gb|EEA96936.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudovibrio
sp. JE062]
gi|359344579|gb|AEV37953.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudovibrio
sp. FO-BEG1]
Length = 421
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 203/396 (51%), Positives = 265/396 (66%), Gaps = 58/396 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI LD++VIGQ RAKK AV+NHYKR+ H+S
Sbjct: 63 IPTPQEIRGVLDDYVIGQGRAKKV---------------LSVAVHNHYKRLNHASKN--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTG GKT LA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLVGPTGCGKTHLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI KAE+ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKITRKAENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 257
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S+R + +SIGF A V A + +TG L ++ DL+ +GLIPEF+GR P++
Sbjct: 258 SDRGRSTSIGFAASVMAPEDRKTG---------ELFAELEPEDLLKFGLIPEFVGRLPVI 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+ED LV +L EPKNAL QY+++F M NV+L F +DAL+ IA+KA+ + TGARG
Sbjct: 309 ATLEDLDEDALVSILREPKNALVAQYQRLFEMENVELTFHEDALKAIARKAIERKTGARG 368
Query: 429 LRALLENILTEAMFEIPETK-IGTSSVNAVLVDKEA 463
LR++LE IL E M+E+P K + ++A +VD EA
Sbjct: 369 LRSILEAILLETMYELPGLKGVKEVVISAEVVDGEA 404
>gi|398948872|ref|ZP_10672974.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM33]
gi|398160046|gb|EJM48328.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM33]
Length = 427
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ +ND+ VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKNDD-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTKGGIGFNAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +AK+A+ + TGARGLR
Sbjct: 315 LDELDETALMQILTEPKNALTKQYAKLFEMEGVDLEFRSDALKSVAKRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSEVSKVVIDESVIEGKSKP 410
>gi|408823479|ref|ZP_11208369.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
geniculata N1]
Length = 429
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 202/424 (47%), Positives = 273/424 (64%), Gaps = 62/424 (14%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E R+S LP P+EI + LD++VIGQ RAK++
Sbjct: 48 NDIIREELEEKAQSARSS-----LPKPREILEVLDQYVIGQNRAKRT------------- 89
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKRI S QK ND+ VEL KSN+LL
Sbjct: 90 --LAVAVYNHYKRI--ESRQK-------------------------NDD-VELAKSNILL 119
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFT+ DAT LT+AGYVGED E+++ KLL D+DVE AQ
Sbjct: 120 VGPTGSGKTLLAETLARLLNVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQ 179
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
+GIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ +
Sbjct: 180 QGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEF 237
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLES 346
+ +DTK+ILFICGGAF GL++ I R D SIGFGA V+++ R + +L
Sbjct: 238 LQVDTKNILFICGGAFAGLDRVIQARSTDVGSIGFGAKVKSSERKQEV------GKVLAE 291
Query: 347 VDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLH 406
V+ DL+ +GLIPEF+GR P++ +L L+E L+++L EPKNA+ +Q+KK+F M NV+L
Sbjct: 292 VEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIRILTEPKNAITKQFKKLFEMENVELE 351
Query: 407 FTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
F DAL IA+KA+ + TGARGLR ++E++L + M+++P +V+ V+VD+ +
Sbjct: 352 FRPDALSAIARKALKRKTGARGLRTIVESVLLDTMYDLP----SQENVSKVVVDESVIEH 407
Query: 467 VDAP 470
P
Sbjct: 408 KSEP 411
>gi|310816209|ref|YP_003964173.1| ATP-dependent protease ATP-binding subunit [Ketogulonicigenium
vulgare Y25]
gi|385233714|ref|YP_005795056.1| ATP-dependent protease ATP-binding subunit [Ketogulonicigenium
vulgare WSH-001]
gi|308754944|gb|ADO42873.1| ATP-dependent protease ATP-binding subunit [Ketogulonicigenium
vulgare Y25]
gi|343462625|gb|AEM41060.1| ATP-dependent protease ATP-binding subunit [Ketogulonicigenium
vulgare WSH-001]
Length = 422
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 202/423 (47%), Positives = 276/423 (65%), Gaps = 68/423 (16%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EIC LD++VIGQ AK+ AV+NHYKR+ H++
Sbjct: 63 VPTPREICAVLDDYVIGQVHAKRV---------------LSVAVHNHYKRLNHAA----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KS N+EI EL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 103 ---------------KS------NNEI-ELAKSNILLIGPTGSGKTLLAQTLARILDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLE+ I
Sbjct: 201 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERII 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
++R + +GF A VR D L ++ DL+ +GLIPEF+GR P++ +
Sbjct: 259 AQRSKGQGMGFNANVRE-------VDERGVGELFMELEPEDLLKFGLIPEFVGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L+ D L+Q+L EPKNAL +QY+++F + VKL FT+DAL+ IA KA+ + TGARGLR
Sbjct: 312 LTDLDVDALIQILTEPKNALVKQYQRLFDIEAVKLTFTEDALKAIASKAIERKTGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHET 490
+++E IL + MFE+P G +V+ V+V+++AV LHG L+ E
Sbjct: 372 SIMEGILLDTMFELP----GLETVSEVVVNEDAV------------LHGAKPLQIHAEEK 415
Query: 491 KSA 493
K A
Sbjct: 416 KPA 418
>gi|28897692|ref|NP_797297.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
parahaemolyticus RIMD 2210633]
gi|153839647|ref|ZP_01992314.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus AQ3810]
gi|260366280|ref|ZP_05778736.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus K5030]
gi|260879438|ref|ZP_05891793.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus AN-5034]
gi|260898291|ref|ZP_05906787.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus Peru-466]
gi|417320362|ref|ZP_12106908.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
parahaemolyticus 10329]
gi|433657175|ref|YP_007274554.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
parahaemolyticus BB22OP]
gi|31340005|sp|Q87R79.1|CLPX_VIBPA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|28805905|dbj|BAC59181.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus RIMD 2210633]
gi|149746837|gb|EDM57825.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus AQ3810]
gi|308088429|gb|EFO38124.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus Peru-466]
gi|308093194|gb|EFO42889.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus AN-5034]
gi|308114044|gb|EFO51584.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus K5030]
gi|328473325|gb|EGF44173.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
parahaemolyticus 10329]
gi|432507863|gb|AGB09380.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
parahaemolyticus BB22OP]
Length = 426
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 259/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTPK+I + LD++VIGQ+ AKK AVYNHYKR+
Sbjct: 65 LPTPKQIREHLDDYVIGQDYAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 ---------------RNGDTTSEG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR+ T L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVATGTGIGFGAEVRSKNETK------TVGELFTQVEPEDLVKYGLIPEFIGRLPVTT 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY +F + N +L F +DALR IAKKAM + TGARGL
Sbjct: 315 TLTELDEEALIQILCEPKNALTKQYAALFELENAELEFREDALRAIAKKAMERKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE++L E M+E+P + V+ V++D+ + P
Sbjct: 375 RSILESVLLETMYELP----SATDVSKVVIDESVINGESEP 411
>gi|418520578|ref|ZP_13086626.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. malvacearum str. GSPB2388]
gi|410703463|gb|EKQ61954.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. malvacearum str. GSPB2388]
Length = 428
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 201/424 (47%), Positives = 272/424 (64%), Gaps = 62/424 (14%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E R+S LP P+EI + LD++VIGQ RAK++
Sbjct: 48 NDIIREELEEKAQSARSS-----LPKPREILEVLDQYVIGQLRAKRT------------- 89
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKRI S +ND+ VEL KSN+LL
Sbjct: 90 --LAVAVYNHYKRIESRS---------------------------KNDD-VELAKSNILL 119
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ
Sbjct: 120 VGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQ 179
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
+GIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ +
Sbjct: 180 QGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEF 237
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQDS-SIGFGAPVRANMRTGGLTDALVTSSLLES 346
+ +DTK+ILFICGGAF GL+K I +R D+ IGFGA V+++ R + +L
Sbjct: 238 LQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSERKQEV------GKILAE 291
Query: 347 VDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLH 406
V+ DL+ +GLIPEF+GR P++ +L L+E L+++L EPKNA+ +Q++K+F M V+L
Sbjct: 292 VEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFRKLFDMEGVELE 351
Query: 407 FTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
F DAL IAKKA+ + TGARGLR ++E++L + M+E+P +V+ V+VD+ +
Sbjct: 352 FRPDALSAIAKKALKRKTGARGLRTIVESVLLDTMYELP----SQENVSKVVVDESVIEH 407
Query: 467 VDAP 470
P
Sbjct: 408 KSEP 411
>gi|398893208|ref|ZP_10646002.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM55]
gi|398184566|gb|EJM72012.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM55]
Length = 427
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ +ND+ VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKNDD-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTKGGIGFSAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +AK+A+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRSDALKSVAKRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSEVSKVVIDESVIEGKSKP 410
>gi|333897650|ref|YP_004471524.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermoanaerobacterium xylanolyticum LX-11]
gi|390934516|ref|YP_006392021.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|333112915|gb|AEF17852.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermoanaerobacterium xylanolyticum LX-11]
gi|389570017|gb|AFK86422.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 424
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 195/387 (50%), Positives = 262/387 (67%), Gaps = 58/387 (14%)
Query: 67 EGNID-----LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKR 121
E NID LP PKEI + LD++VIGQ++AKK+ AVYNHYKR
Sbjct: 50 EENIDVEIGELPKPKEIKEFLDQYVIGQDKAKKA---------------LAVAVYNHYKR 94
Query: 122 IYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAK 181
I N V++D+ VEL+KSN+L++GPTGSGKTLLA+
Sbjct: 95 I---------------------------NSRVKSDD-VELQKSNILMLGPTGSGKTLLAQ 126
Query: 182 TLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV 241
TLAR++NVPF I DAT+LT+AGYVGED E++L KL+ AAD+D+E A++GIVYIDEVDKI
Sbjct: 127 TLARMLNVPFAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAEKGIVYIDEVDKIA 186
Query: 242 -KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICG 300
K+E+ + RDVSGEGVQQALLK+LEGTV NVP P G RKHP + I IDT +ILFI G
Sbjct: 187 RKSENPSITRDVSGEGVQQALLKILEGTVANVP-PQGG-RKHPHQEFIQIDTTNILFIVG 244
Query: 301 GAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPE 360
GAF G+EK I R S+GFG+ +++ +L+++ DL+ +GLIPE
Sbjct: 245 GAFDGIEKIIESRIGKKSLGFGSEIQSKQEKK-------IGEILKNIMPEDLLKFGLIPE 297
Query: 361 FIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAM 420
FIGR PI+V+L +L++D L+++L EPKNAL +QY+K+F ++ VKL F AL +IA+KA+
Sbjct: 298 FIGRLPIVVTLDSLDKDALIRILTEPKNALTKQYEKLFELDGVKLEFDKKALSVIAQKAI 357
Query: 421 AKNTGARGLRALLENILTEAMFEIPET 447
+ TGARGLR++LE ++ + M+EIP +
Sbjct: 358 DRKTGARGLRSILEELMLDVMYEIPSS 384
>gi|302874446|ref|YP_003843079.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
cellulovorans 743B]
gi|307690947|ref|ZP_07633393.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
cellulovorans 743B]
gi|302577303|gb|ADL51315.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
cellulovorans 743B]
Length = 426
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 193/375 (51%), Positives = 253/375 (67%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++V+GQE AKKS AVYNHYKRI
Sbjct: 60 LPKPMEIKTHLDQYVVGQESAKKS---------------LAVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N N+ ND+ VEL+KSN+LL+GPTG GKT LA+TLA+++NVPF
Sbjct: 96 ------------------NSNIANDD-VELQKSNILLLGPTGCGKTFLAQTLAKLLNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ AD+DVE A++GI+YIDE+DKI K+E+ + R
Sbjct: 137 AIADATTLTEAGYVGEDVENILLKLIQNADYDVERAEKGIIYIDEIDKIARKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV +VP P G RKHP + I I+T +ILFICGGAF G+EK I
Sbjct: 197 DVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQINTANILFICGGAFDGIEKII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R S+GFGA + + L+ + GDL+ YGLIPEF+GR PI+V+
Sbjct: 255 EKRTSKGSMGFGADITSKKEKN-------IGETLKELMPGDLLKYGLIPEFVGRLPIVVT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L +L+E+ LV++L EPKNAL +QYKK+F+M+ V L F + ALR IAK+A+ ++TGARGLR
Sbjct: 308 LQSLDEEALVKILYEPKNALVKQYKKLFAMDGVDLDFDEKALRAIAKEAIERSTGARGLR 367
Query: 431 ALLENILTEAMFEIP 445
A++E+++ + MFEIP
Sbjct: 368 AIIEDMMKDIMFEIP 382
>gi|331005197|ref|ZP_08328591.1| ATP-dependent Clp protease ATP-binding subunit ClpX [gamma
proteobacterium IMCC1989]
gi|330420979|gb|EGG95251.1| ATP-dependent Clp protease ATP-binding subunit ClpX [gamma
proteobacterium IMCC1989]
Length = 433
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 194/407 (47%), Positives = 269/407 (66%), Gaps = 53/407 (13%)
Query: 66 SEGNID-LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYH 124
SEG D LPTPKEI + LD++VIGQ RAK+ AVYNHYKR+
Sbjct: 61 SEGGSDKLPTPKEITEILDQYVIGQFRAKRV---------------LSVAVYNHYKRL-- 103
Query: 125 SSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLA 184
+ G+ ++ + VEL KSN+L++GPTGSGKTLLA+TLA
Sbjct: 104 ----------------------RFGDTAGKDKDTVELGKSNILMVGPTGSGKTLLAETLA 141
Query: 185 RIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KA 243
R+++VPFTI DAT LT+AGYVGED E+++ KLL D+DV+ AQ+GIVYIDE+DKI K+
Sbjct: 142 RLLDVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAQQGIVYIDEIDKISRKS 201
Query: 244 ESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAF 303
++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILF+CGGAF
Sbjct: 202 DNPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSNILFVCGGAF 259
Query: 304 VGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIG 363
GL+K I +R + IGF A V+ + G+ +A L+ ++S DLVAYGLIPEF+G
Sbjct: 260 AGLDKVIRDRSEKGGIGFNAVVKNKEESKGVGEA------LKELESEDLVAYGLIPEFVG 313
Query: 364 RFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKN 423
R P++ +L L+E L+Q+L EPKN+L +QY K+F M V++ F +DAL+ +A KAM +
Sbjct: 314 RLPMIATLEELDEQALIQILTEPKNSLTKQYTKLFEMEGVEIDFREDALKAVATKAMVRK 373
Query: 424 TGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
TGARGLR+++E +L + M+ IP + +V V+VD+ + P
Sbjct: 374 TGARGLRSIMEAVLLDTMYRIPSEE----NVQKVVVDEGVISGESEP 416
>gi|330994050|ref|ZP_08317980.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Gluconacetobacter sp. SXCC-1]
gi|329758996|gb|EGG75510.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Gluconacetobacter sp. SXCC-1]
Length = 419
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 195/377 (51%), Positives = 260/377 (68%), Gaps = 57/377 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EICK LD++VIGQ AKK AV+NHYKR+ H+ QK
Sbjct: 62 VPTPREICKILDDYVIGQAHAKKV---------------LSVAVHNHYKRLAHA--QKN- 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VE+ KSN++L+GPTGSGKTLLA+TLARI++VPF
Sbjct: 104 -----------------------ND--VEIAKSNIMLLGPTGSGKTLLAQTLARILDVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 139 TMADATTLTEAGYVGEDVENIILKLLQAADYNVEKAQRGIVYIDEIDKISRKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ++LFICGGAF GL+K I
Sbjct: 199 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNMLFICGGAFAGLDKII 256
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + S IGFGA V++ R G ++L V+ DL+ +GLIPEFIGR P++
Sbjct: 257 SARGKGSGIGFGADVQSPEERRMG---------AVLRDVEPEDLLKFGLIPEFIGRLPVV 307
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E L+++L +PKNAL +QY ++F M V+L FT+DALR IA++A+A+ TGARG
Sbjct: 308 ATLEDLDEAALIEILTKPKNALVKQYARLFQMEEVQLTFTEDALRQIAQRAIARRTGARG 367
Query: 429 LRALLENILTEAMFEIP 445
LRA+LE+IL MF++P
Sbjct: 368 LRAILESILLSTMFDLP 384
>gi|62260894|gb|AAX77944.1| unknown protein [synthetic construct]
Length = 452
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 194/378 (51%), Positives = 245/378 (64%), Gaps = 51/378 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI K LD+++IGQ+ AKK AVYNHYKRI
Sbjct: 82 LPKPVEIKKYLDDYIIGQDNAKKV---------------LSVAVYNHYKRI--------- 117
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N+ D+ EL+KSNVLL+GPTGSGKTL A+TLA+++NVPF
Sbjct: 118 ------------------TSNLTKDDDTELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPF 159
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVG+D E+++ +LL ADFDV AQ+GI+YIDE+DKI K+ES + R
Sbjct: 160 AIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKSESTSITR 219
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP D I +DT DILFICGGAF G+EK I
Sbjct: 220 DVSGEGVQQALLKLIEGTVSSVP-PKGG-RKHPNQDMIQVDTSDILFICGGAFAGIEKVI 277
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R SIGF + V ++L + L++ ++S DL +GLIPE IGR PI+
Sbjct: 278 KHRMDKVSIGFNSDVIQQ------KNSLDSDKLMQKIESEDLTRFGLIPELIGRLPIVTV 331
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L E+ LV++L EPKNAL +QY K+F +NV + FTD AL IAKKA+ K TGARGLR
Sbjct: 332 LNELKEEDLVRILTEPKNALIKQYIKLFKFDNVNIEFTDQALVEIAKKAITKKTGARGLR 391
Query: 431 ALLENILTEAMFEIPETK 448
+LEN+L E MF IP ++
Sbjct: 392 TILENVLLEVMFHIPSSE 409
>gi|164686708|ref|ZP_02210736.1| hypothetical protein CLOBAR_00303 [Clostridium bartlettii DSM
16795]
gi|164604098|gb|EDQ97563.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
bartlettii DSM 16795]
Length = 415
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 195/398 (48%), Positives = 269/398 (67%), Gaps = 60/398 (15%)
Query: 70 IDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQK 129
+ LP PKE+ + L+++VIGQERAKK IL AVYNHYKRIY
Sbjct: 58 LSLPKPKEMMEILNDYVIGQERAKK-----IL----------SVAVYNHYKRIYS----- 97
Query: 130 ELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNV 189
K GN + V+++KSN+LL+GPTGSGKTLLA+TLA+ +NV
Sbjct: 98 -----------------KKGNS-----KDVDIQKSNILLLGPTGSGKTLLAQTLAKTLNV 135
Query: 190 PFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNN 248
PF + DAT+LT+AGYVGED E++L KL+ AADFD+E A+RGI+YIDE+DKI K+E+ +
Sbjct: 136 PFAMADATSLTEAGYVGEDVENILLKLIQAADFDIEKAERGIIYIDEIDKIARKSENPSI 195
Query: 249 GRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEK 308
RDVSGEGVQQALLK+LEGTV NVP P G RKHP + + IDT ++LFI GGAF G+EK
Sbjct: 196 TRDVSGEGVQQALLKILEGTVANVP-PQGG-RKHPHQEFLKIDTTNVLFILGGAFDGIEK 253
Query: 309 TISERRQDSSIGFGAPV--RANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFP 366
I R + ++GFGA + + N+ G + ++ DL+ +G+IPEFIGR P
Sbjct: 254 IIQRRGETKTLGFGAKIESKKNVDLGKIYSKVLPE---------DLLKFGIIPEFIGRIP 304
Query: 367 ILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGA 426
++ +L L+E+ L+++L EPKNAL +QYKK+ ++NV+L F D+ALR IAKKA+ +NTGA
Sbjct: 305 VVATLELLDENALMRILQEPKNALVKQYKKLLELDNVELEFEDEALRAIAKKAIERNTGA 364
Query: 427 RGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
RGLR+++E+++ E+M+E+P + V+V K+AV
Sbjct: 365 RGLRSIVESVMMESMYEVP----SRDDIKKVIVTKKAV 398
>gi|402699100|ref|ZP_10847079.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas fragi
A22]
Length = 427
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 259/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ +ND+ VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKNDD-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK +
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVV 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QARSTRGGIGFSAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +AK+A+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYGKLFEMEGVDLEFRADALKAVAKRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE++L + MFEIP S V+ V++D+ + P
Sbjct: 375 SILESVLLDTMFEIP----SQSEVSKVVIDESVIEGKSKP 410
>gi|297538720|ref|YP_003674489.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylotenera
versatilis 301]
gi|297258067|gb|ADI29912.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylotenera
versatilis 301]
Length = 426
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 203/401 (50%), Positives = 266/401 (66%), Gaps = 52/401 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP+EICK LD++VIGQ AKK+ AVYNHYKR+ H++L
Sbjct: 63 LPTPQEICKILDQYVIGQTHAKKN---------------LAVAVYNHYKRLGHNNL---- 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
SD + DE VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 104 -SD-----------------GGQKDE-VEISKSNILLIGPTGSGKTLLAQTLARLLDVPF 144
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL D+DVE A+RGIVYIDEVDKI K+E+ + R
Sbjct: 145 VMADATTLTEAGYVGEDVENIMQKLLQKCDYDVEKAKRGIVYIDEVDKISRKSENASITR 204
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV + IP G RKHP + + +DT +ILFICGGAF GLEK I
Sbjct: 205 DVSGEGVQQALLKLIEGTVAS--IPPQGGRKHPNQEFVQLDTTNILFICGGAFDGLEKVI 262
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R + IGFGA V+ G D ++L V+ DL+ +GLIPEFIGR P++ +
Sbjct: 263 RLRSEKGGIGFGAEVK------GKNDIRQVGAVLRDVEPEDLIKFGLIPEFIGRLPVVAT 316
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L +L+E L+ +L EPKNAL +QY K+F M V+L F + AL LIAKKA+ + TGARGLR
Sbjct: 317 LESLDEAALMTILTEPKNALTKQYIKLFKMEGVELEFRESALLLIAKKALERKTGARGLR 376
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPG 471
++LE+ L + M+E+P + +++ V+VD E V DAP
Sbjct: 377 SILEHSLLDIMYELPSLE----NLSKVVVD-EGVVRGDAPA 412
>gi|84499431|ref|ZP_00997719.1| ATP-dependent protease ATP-binding subunit [Oceanicola batsensis
HTCC2597]
gi|84392575|gb|EAQ04786.1| ATP-dependent protease ATP-binding subunit [Oceanicola batsensis
HTCC2597]
Length = 422
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 196/411 (47%), Positives = 274/411 (66%), Gaps = 67/411 (16%)
Query: 36 EIMGGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKS 95
E+ IR++ +S G++S SEG +PTP+EIC LD++VIGQ+ AK+
Sbjct: 42 ELCMDIIREETKSTGLKS------------SEG---VPTPQEICDVLDDYVIGQKIAKRV 86
Query: 96 HIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEN 155
AV+NHYKR+ H++ KSG
Sbjct: 87 ---------------LSVAVHNHYKRLNHAA--------------------KSGG----- 106
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
+EL KSN+LL+GPTG GKTLLA+TLARI++VPFT+ DAT LT+AGYVGED E+++ K
Sbjct: 107 --DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILK 164
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
LL +++++VE AQRGIVYIDEVDKI K+E+ + RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 LLQSSEYNVEKAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVP- 223
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
P G RKHP+ + + +DT +ILFICGGAF GL++ I++R + S++GFGA VR N G
Sbjct: 224 PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAMGFGADVRDNDERG-- 280
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
+ + ++ DL+ +GLIPEF+GR P+L +L L+E+ LV +L EPKNAL +QY
Sbjct: 281 -----VGEVFQDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEEALVTILTEPKNALVKQY 335
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP 445
+++F + + +L FTDDAL I++KA+ + TGARGLR++LE+IL + MFE+P
Sbjct: 336 QRLFELEDARLTFTDDALSAISRKAIERKTGARGLRSILEDILLDTMFELP 386
>gi|182627118|ref|ZP_02954836.1| HesB-like domain protein [Clostridium perfringens D str. JGS1721]
gi|177907507|gb|EDT70165.1| HesB-like domain protein [Clostridium perfringens D str. JGS1721]
Length = 435
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 193/376 (51%), Positives = 254/376 (67%), Gaps = 53/376 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LP P+EI LD++V+GQ+RAKKS AVYNHYKRI
Sbjct: 62 NLPKPQEIKDYLDQYVVGQDRAKKS---------------LAVAVYNHYKRI-------- 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N N D+ VEL+KSN+LL+GPTGSGKTLLA+TLA+++NVP
Sbjct: 99 -------------------NANKAEDD-VELQKSNILLLGPTGSGKTLLAQTLAKMLNVP 138
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT LT+AGYVGED E++L KL+ AD+DVE A++GI+YIDE+DKI K+E+ +
Sbjct: 139 FAIADATTLTEAGYVGEDVENILLKLIQNADYDVERAEKGIIYIDEIDKIARKSENPSIT 198
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT +VP P G RKHP + I I+T +ILFICGGAF G++K
Sbjct: 199 RDVSGEGVQQALLKILEGTTASVP-PQGG-RKHPHQEFIQINTSNILFICGGAFDGIDKI 256
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I +R SSIGFGA V+ LL+ + GDL+ +GLIPEF+GR P+LV
Sbjct: 257 IEKRGTKSSIGFGAEVKGKSEKN-------VGELLKDIMPGDLLKFGLIPEFVGRLPVLV 309
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+ + LV +L +PKNAL +QYKK+F ++NVKL FT++AL+ IA +A+ + TGARGL
Sbjct: 310 TLEALDNEALVSILTKPKNALVKQYKKLFELDNVKLDFTEEALKAIADEAINRKTGARGL 369
Query: 430 RALLENILTEAMFEIP 445
RA++E + + MF+IP
Sbjct: 370 RAIVEETMMDIMFDIP 385
>gi|49475381|ref|YP_033422.1| ATP-dependent protease ATP-binding subunit ClpX [Bartonella
henselae str. Houston-1]
gi|61211490|sp|Q6G3Z2.1|CLPX_BARHE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|49238187|emb|CAF27397.1| ATP-dependent clp protease ATP-binding subunit clpX [Bartonella
henselae str. Houston-1]
Length = 424
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 200/411 (48%), Positives = 268/411 (65%), Gaps = 68/411 (16%)
Query: 36 EIMGGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKS 95
E+ IR++ +S+GI++ +PTP+EI LD++VIGQ+ AK+
Sbjct: 44 ELCMDIIREENKSSGIKARD---------------GVPTPQEIITVLDDYVIGQQHAKRV 88
Query: 96 HIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEN 155
AV+NHYKR+ H S KS N
Sbjct: 89 ---------------LSVAVHNHYKRLAHQS--------------------KS------N 107
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
D +EL KSN+LL+GPTG GKT LA+TLARI++VPFT+ DAT LT+AGYVGED E+++ K
Sbjct: 108 D--IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILK 165
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
LL AAD++VE AQRGIVYIDEVDKI KA++ + RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQAADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVP- 224
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
P G RKHP+ + + +DT +ILFICGGAF GLE+ IS R + +SIGF A V+A
Sbjct: 225 PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA------- 276
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
D + ++ DL+ +GLIPEFIGR PI+ +L L+ + LVQ+L +PKNAL +QY
Sbjct: 277 PDERCVGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALVQILSKPKNALVKQY 336
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP 445
+++F M NV+L F +DALR+IAKKA+ + TGARGLR+++E IL E MFE+P
Sbjct: 337 QRLFEMENVELAFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFELP 387
>gi|18310374|ref|NP_562308.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
perfringens str. 13]
gi|110800496|ref|YP_696087.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
perfringens ATCC 13124]
gi|168207807|ref|ZP_02633812.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens E str. JGS1987]
gi|168212103|ref|ZP_02637728.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens B str. ATCC 3626]
gi|168215326|ref|ZP_02640951.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens CPE str. F4969]
gi|168217823|ref|ZP_02643448.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens NCTC 8239]
gi|169342285|ref|ZP_02863363.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens C str. JGS1495]
gi|422346058|ref|ZP_16426972.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
perfringens WAL-14572]
gi|422874316|ref|ZP_16920801.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
perfringens F262]
gi|21263462|sp|Q8XKK2.1|CLPX_CLOPE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123148746|sp|Q0TQK3.1|CLPX_CLOP1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|18145054|dbj|BAB81098.1| ATP-dependent Clp protease ATP-binding subunit [Clostridium
perfringens str. 13]
gi|110675143|gb|ABG84130.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens ATCC 13124]
gi|169299612|gb|EDS81671.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens C str. JGS1495]
gi|170660869|gb|EDT13552.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens E str. JGS1987]
gi|170709985|gb|EDT22167.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens B str. ATCC 3626]
gi|170713288|gb|EDT25470.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens CPE str. F4969]
gi|182380170|gb|EDT77649.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens NCTC 8239]
gi|373226680|gb|EHP49002.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
perfringens WAL-14572]
gi|380304793|gb|EIA17079.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
perfringens F262]
Length = 435
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 199/396 (50%), Positives = 261/396 (65%), Gaps = 56/396 (14%)
Query: 51 IESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIG 110
IE E E GN + +LP P+EI LD++V+GQ+RAKKS
Sbjct: 45 IEDEFE---GNTESSPLEASNLPKPQEIKDYLDQYVVGQDRAKKS--------------- 86
Query: 111 ACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMG 170
AVYNHYKRI N N D+ VEL+KSN+LL+G
Sbjct: 87 LAVAVYNHYKRI---------------------------NANKAEDD-VELQKSNILLLG 118
Query: 171 PTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRG 230
PTGSGKTLLA+TLA+++NVPF I DAT LT+AGYVGED E++L KL+ AD+DVE A++G
Sbjct: 119 PTGSGKTLLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLKLIQNADYDVERAEKG 178
Query: 231 IVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIP 289
I+YIDE+DKI K+E+ + RDVSGEGVQQALLK+LEGT +VP P G RKHP + I
Sbjct: 179 IIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTTASVP-PQGG-RKHPHQEFIQ 236
Query: 290 IDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDS 349
I+T +ILFICGGAF G++K I +R SSIGFGA V+ LL+ +
Sbjct: 237 INTSNILFICGGAFDGIDKIIEKRGTKSSIGFGAEVKGKSEKN-------VGELLKDIMP 289
Query: 350 GDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTD 409
GDL+ +GLIPEF+GR P+LV+L AL+ + LV +L +PKNAL +QYKK+F ++NVKL FT+
Sbjct: 290 GDLLKFGLIPEFVGRLPVLVTLEALDNEALVSILTKPKNALVKQYKKLFELDNVKLDFTE 349
Query: 410 DALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP 445
+AL+ IA +A+ + TGARGLRA++E + + MF+IP
Sbjct: 350 EALKAIADEAINRKTGARGLRAIVEETMMDIMFDIP 385
>gi|350562400|ref|ZP_08931234.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349779342|gb|EGZ33688.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 425
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 209/424 (49%), Positives = 274/424 (64%), Gaps = 66/424 (15%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E G+ R+S LP P+EI LDE+VIGQ+ AKK IL
Sbjct: 46 NDIIREEMQEAGHTERDS-----LPKPREIRAILDEYVIGQDSAKK-----IL------- 88
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKR+ KSG +VE L KSN+LL
Sbjct: 89 ---SVAVYNHYKRLE----------------------AKSGKDDVE------LSKSNILL 117
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL +D+DVE A+
Sbjct: 118 IGPTGSGKTLLAETLARVLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKSDYDVEKAE 177
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
GIVYIDE+DKI K+++ + RDVSGEGVQQALLK++EGT +VP P G RKHP+ +
Sbjct: 178 TGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTASVP-PQGG-RKHPQQEF 235
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLE 345
+ +DT++ILFICGGAF GLEK I +R + IGF A VR+ R+G S+ L+
Sbjct: 236 LQVDTRNILFICGGAFSGLEKVIQQRSEKGGIGFSAEVRSKDKDRSG--------SAWLQ 287
Query: 346 SVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKL 405
+++ DLV YGLIPEF+GR P+ +L L+E LV +L +P+NAL +QY ++F M V L
Sbjct: 288 RLEAEDLVRYGLIPEFVGRLPVQATLEELDEAALVTILTQPRNALVKQYHRLFEMEGVDL 347
Query: 406 HFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVG 465
F DDAL IA+KAM + TGARGLR+++ENIL + M+E+P + +V+ V++D EAV
Sbjct: 348 EFRDDALSAIARKAMNRKTGARGLRSIMENILLDTMYELPSME----NVSKVVID-EAVI 402
Query: 466 SVDA 469
DA
Sbjct: 403 RGDA 406
>gi|416350489|ref|ZP_11680891.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum C str. Stockholm]
gi|338196269|gb|EGO88473.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum C str. Stockholm]
Length = 436
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 198/394 (50%), Positives = 265/394 (67%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKRI
Sbjct: 60 LPKPSEIKTYLDDYVIGQDSAKKA---------------LAVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N NV+ D+ VEL+KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 96 ------------------NSNVDIDD-VELQKSNILLLGPTGSGKTLLAQTLARLLNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ AD+DVE A+RGI+YIDE+DKI K+E+ + R
Sbjct: 137 AIADATTLTEAGYVGEDVENILLKLIQNADYDVEKAERGIIYIDEIDKIARKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV +VP P G RKHP + I I+T +ILFICGGAF GL+K I
Sbjct: 197 DVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQINTSNILFICGGAFDGLDKII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + SS+GFG+ V++ + L ESV DL+ +GLIPEFIGR PI+V+
Sbjct: 255 EKRTRKSSLGFGSEVKSKEEKD------IGELLKESVPE-DLLKFGLIPEFIGRLPIMVT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L +LN D LV++L EPKNAL +QYKK+ M+NV+L F ++AL+ IA +A+++ TGARGLR
Sbjct: 308 LQSLNNDALVRILKEPKNALVKQYKKLLLMDNVELEFEEEALKSIADEAISRKTGARGLR 367
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E ++ + MF+IP + V+++K+ +
Sbjct: 368 SIIEEVMRDIMFDIP----SKYDIKKVIINKDTI 397
>gi|336114570|ref|YP_004569337.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bacillus
coagulans 2-6]
gi|335368000|gb|AEH53951.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Bacillus
coagulans 2-6]
Length = 422
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 206/424 (48%), Positives = 273/424 (64%), Gaps = 62/424 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P P EI + L E+VIGQE+AKKS AVYNHYKRI
Sbjct: 60 DIPKPHEIREILAEYVIGQEQAKKS---------------LAVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N N + DE VEL KSN+ L+GPTGSGKTLLA+TLARI+NVP
Sbjct: 97 -------------------NSNSKIDE-VELAKSNICLIGPTGSGKTLLAQTLARILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A++GI+YIDE+DKI K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIIYIDEIDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFICGGAF G+++
Sbjct: 197 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFDGIDQI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R IGFG ++ D L SLL+ V DL+++GLIPEFIGR P++
Sbjct: 255 IKRRLGKKVIGFGTDLK--------NDELDEKSLLKQVLPEDLLSFGLIPEFIGRLPVIA 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+E+ L+++L EPKNAL +QYKKM +++V+L F DAL+ IAKKA+ + TGARGL
Sbjct: 307 TLEQLDEEALIKILTEPKNALVKQYKKMLELDHVELEFEQDALKEIAKKAIERKTGARGL 366
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHE 489
R+++E I+ + MF++P + +V KE+V + P +++ DG + +
Sbjct: 367 RSIIEGIMLDVMFDLP----SREDIEKCIVTKESVLDKEFP----RLVLKDGTVIEGSDQ 418
Query: 490 TKSA 493
TKSA
Sbjct: 419 TKSA 422
>gi|409993261|ref|ZP_11276409.1| ATP-dependent protease ATP-binding subunit ClpX [Arthrospira
platensis str. Paraca]
gi|291568934|dbj|BAI91206.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Arthrospira
platensis NIES-39]
gi|409935885|gb|EKN77401.1| ATP-dependent protease ATP-binding subunit ClpX [Arthrospira
platensis str. Paraca]
Length = 456
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 200/395 (50%), Positives = 264/395 (66%), Gaps = 37/395 (9%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LP P EI + LD+ VIGQ KK AVYNHYKR+ S+ E
Sbjct: 77 ELPKPVEIKQYLDQHVIGQNNTKKV---------------LSVAVYNHYKRL---SVDAE 118
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+S+ + D G +DE VEL+KSN+LLMGPTG GKTLLA++LA++++VP
Sbjct: 119 NISNQGF-DETQGY----------SDEQVELQKSNILLMGPTGCGKTLLAESLAKLLDVP 167
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LT+AGYVG+D E++L +LL ADFD+EAAQ+GIVYIDE+DKI K+E+ +
Sbjct: 168 FAVADATTLTEAGYVGDDVENILLRLLQVADFDIEAAQQGIVYIDEIDKIARKSENTSIT 227
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTVVNVP P G RKHP D I IDT ILFICGGAFVGL+K
Sbjct: 228 RDVSGEGVQQALLKILEGTVVNVP-PQGG-RKHPYQDFIQIDTSKILFICGGAFVGLDKV 285
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ +R S+GF P G+ ++ ++ +L++V+ DLV +GLIPEFIGR P+L
Sbjct: 286 VEQRMGKKSLGFIQP-GVKPEEEGVKTSVDSTEVLQNVEPQDLVKFGLIPEFIGRVPVLT 344
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+S L+E+ LV++L EP NAL +QYK++ M+NV L F DAL IAK+A + TGAR L
Sbjct: 345 VISPLDEEALVKILTEPHNALVKQYKQLLKMDNVSLEFEPDALIAIAKEAYRRKTGARAL 404
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
R +LE ++ E M+E+P K VN+ ++ KE V
Sbjct: 405 RGILEELMLEVMYELPSRK----DVNSCVITKEMV 435
>gi|383640601|ref|ZP_09953007.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas
elodea ATCC 31461]
Length = 421
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 193/375 (51%), Positives = 253/375 (67%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P+P+EIC LD++VIGQ++AK+ AV+NHYKR+ H
Sbjct: 64 VPSPQEICDVLDDYVIGQKKAKRV---------------LSVAVHNHYKRLNH------- 101
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G K + VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 102 -------------GAKGAD--------VELAKSNILLVGPTGCGKTLLAQTLARILDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI KAE+ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKAENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 201 DVSGEGVQQALLKLMEGTTASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGLEKII 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R Q SIGFGA V A D T LL + DL+ +GLIPEF+GR P++ +
Sbjct: 259 GDRLQGKSIGFGAHVAA-------PDERRTGELLRQTEPEDLLKFGLIPEFVGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ + L+++L EPKNAL +QY+K+F M VKL FTDDAL ++KKA+ + TGARGLR
Sbjct: 312 LEDLDVEALIKILTEPKNALVKQYQKLFDMEAVKLGFTDDALTAVSKKAIERKTGARGLR 371
Query: 431 ALLENILTEAMFEIP 445
++LE IL + MF++P
Sbjct: 372 SILEGILLDTMFDLP 386
>gi|325294781|ref|YP_004281295.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065229|gb|ADY73236.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Desulfurobacterium thermolithotrophum DSM 11699]
Length = 411
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 202/407 (49%), Positives = 267/407 (65%), Gaps = 59/407 (14%)
Query: 60 GNRNRNSEGNID-LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNH 118
G + + + +D LPTPKEI + LD++V+GQE AKK AVYNH
Sbjct: 49 GEKKKGAPVKVDKLPTPKEIKEFLDQYVVGQEEAKKV---------------LSVAVYNH 93
Query: 119 YKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTL 178
YKRI + E+ VELEKSN+LL+GPTGSGKTL
Sbjct: 94 YKRIMSN----------------------------EDTSEVELEKSNILLIGPTGSGKTL 125
Query: 179 LAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVD 238
LA++LA++++VPF I DAT LT+AGYVGED E++L +L+ AADFD+E A+RGI+YIDE+D
Sbjct: 126 LARSLAKLLDVPFAIADATTLTEAGYVGEDVENILLRLIQAADFDIEKAERGIIYIDEID 185
Query: 239 KIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILF 297
KI K+E+ + RDVSGEGVQQALLK+LEGT+ NVP P G RKHP I IDT +ILF
Sbjct: 186 KISRKSENPSITRDVSGEGVQQALLKILEGTIANVP-PQGG-RKHPHQQYIQIDTSNILF 243
Query: 298 ICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGL 357
ICGGAFVGLE I++R +GF A V+ N L S LL+ V+ DLV +GL
Sbjct: 244 ICGGAFVGLEDIIAKRIGKGGMGFTADVKRN--------KLERSELLKHVEPDDLVKFGL 295
Query: 358 IPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAK 417
IPE IGR P++ +L+ L E+ L+++L EPKNAL +QY+K+ + V+L FTD ALR IAK
Sbjct: 296 IPELIGRLPVIATLNELTEEDLIRILKEPKNALVKQYRKLLELEGVELEFTDGALREIAK 355
Query: 418 KAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+A+ + TGARGLRA++E ++T+ MFE+P K + V++D EAV
Sbjct: 356 EAIRRKTGARGLRAIMEKLMTDVMFEVPHRK----DIKKVIIDAEAV 398
>gi|66044993|ref|YP_234834.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. syringae B728a]
gi|237803595|ref|ZP_04591180.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|257483814|ref|ZP_05637855.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|289627505|ref|ZP_06460459.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aesculi str. NCPPB 3681]
gi|289649944|ref|ZP_06481287.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aesculi str. 2250]
gi|289679416|ref|ZP_06500306.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. syringae FF5]
gi|416015384|ref|ZP_11562997.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. glycinea str. B076]
gi|416028211|ref|ZP_11571267.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422406895|ref|ZP_16483912.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422583544|ref|ZP_16658667.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|422591340|ref|ZP_16665985.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|422595335|ref|ZP_16669623.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|422606344|ref|ZP_16678354.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. mori str. 301020]
gi|422630347|ref|ZP_16695545.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. pisi str. 1704B]
gi|422645839|ref|ZP_16708974.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|422650230|ref|ZP_16713036.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|422664683|ref|ZP_16724556.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aptata str. DSM 50252]
gi|422683345|ref|ZP_16741606.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|424066810|ref|ZP_17804272.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|424071463|ref|ZP_17808888.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|440721403|ref|ZP_20901802.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae BRIP34876]
gi|440724450|ref|ZP_20904732.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae BRIP34881]
gi|443644727|ref|ZP_21128577.1| ATP-dependent Clp protease, ATP-binding subunit [Pseudomonas
syringae pv. syringae B64]
gi|81308383|sp|Q4ZVM6.1|CLPX_PSEU2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|63255700|gb|AAY36796.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. syringae B728a]
gi|298159271|gb|EFI00329.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|320325362|gb|EFW81429.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. glycinea str. B076]
gi|320327653|gb|EFW83661.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330868374|gb|EGH03083.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|330878773|gb|EGH12922.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|330882124|gb|EGH16273.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330889996|gb|EGH22657.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. mori str. 301020]
gi|330939707|gb|EGH43002.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. pisi str. 1704B]
gi|330959388|gb|EGH59648.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|330963319|gb|EGH63579.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|330975102|gb|EGH75168.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aptata str. DSM 50252]
gi|330985640|gb|EGH83743.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|331012680|gb|EGH92736.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|331025577|gb|EGI05633.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|407998843|gb|EKG39241.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|408001927|gb|EKG42202.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|440363824|gb|ELQ00983.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae BRIP34876]
gi|440370094|gb|ELQ07040.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae BRIP34881]
gi|443284744|gb|ELS43749.1| ATP-dependent Clp protease, ATP-binding subunit [Pseudomonas
syringae pv. syringae B64]
Length = 427
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ +ND+ VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKNDD-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTRGGIGFNAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +A++A+ + TGARGLR
Sbjct: 315 LDELDEAALIQILTEPKNALTKQYAKLFEMEGVDLEFRTDALKSVARRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSDVSKVVIDESVIDGTSKP 410
>gi|395791167|ref|ZP_10470625.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
alsatica IBS 382]
gi|395408530|gb|EJF75140.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
alsatica IBS 382]
Length = 424
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 200/411 (48%), Positives = 268/411 (65%), Gaps = 68/411 (16%)
Query: 36 EIMGGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKS 95
E+ IR++ +S+GI++ +PTP+EI LD++VIGQ+ AK+
Sbjct: 44 ELCMDIIREENKSSGIKARD---------------GVPTPQEIITVLDDYVIGQQYAKRV 88
Query: 96 HIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEN 155
AV+NHYKR+ H S KS N
Sbjct: 89 ---------------LSVAVHNHYKRLAHQS--------------------KS------N 107
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
D +EL KSN+LL+GPTG GKT LA+TLARI++VPFT+ DAT LT+AGYVGED E+++ K
Sbjct: 108 D--IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILK 165
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
LL AAD++VE AQRGIVYIDEVDKI KA++ + RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQAADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVP- 224
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
P G RKHP+ + + +DT +ILFICGGAF GLE+ IS R + +SIGF A V+A
Sbjct: 225 PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA------- 276
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
D + ++ DL+ +GLIPEFIGR PI+ +L L+ + LVQ+L +PKNAL +QY
Sbjct: 277 PDERCVGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDINALVQILSQPKNALVKQY 336
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP 445
+++F M NV+L F +DALR+IAKKA+ + TGARGLR+++E IL E MFE+P
Sbjct: 337 QRLFEMENVELAFHEDALRIIAKKAIERKTGARGLRSIMEKILLETMFELP 387
>gi|348026430|ref|YP_004766235.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Megasphaera
elsdenii DSM 20460]
gi|341822484|emb|CCC73408.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Megasphaera
elsdenii DSM 20460]
Length = 412
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 192/376 (51%), Positives = 254/376 (67%), Gaps = 51/376 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLPTP EI LDE+VIGQE AKK+ AVYNHYKR+
Sbjct: 58 DLPTPHEIKATLDEYVIGQEAAKKT---------------LSVAVYNHYKRL-------- 94
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N + +D+ VEL+KSN++++GPTGSGKTLLA+TLAR+++VP
Sbjct: 95 -----------------QTNFSASDDD-VELQKSNIVMVGPTGSGKTLLAQTLARLLDVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E+ L KL+ AAD+D+ A+RGI+YIDE+DKI K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENCLLKLIQAADYDIAKAERGIIYIDEIDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV VP P G RKHP + + IDT +ILFICGGAF G++KT
Sbjct: 197 RDVSGEGVQQALLKILEGTVAGVP-PQGG-RKHPHQEMLQIDTTNILFICGGAFDGIDKT 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R D ++GFGA + + SLL+ + DL +GLIPE IGR P+LV
Sbjct: 255 ILNRTTDKNMGFGADIHSKSEHS-------MESLLKEIIPTDLQKFGLIPELIGRLPVLV 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+ED +V +L EPKNAL +QY+KM SM++V L FT +AL+ IAK+A+ +NTGARGL
Sbjct: 308 TLNPLDEDAMVHILTEPKNALVKQYQKMLSMDDVDLEFTPEALQAIAKEALRRNTGARGL 367
Query: 430 RALLENILTEAMFEIP 445
R+++E I+ + MF++P
Sbjct: 368 RSIIERIMLDVMFDVP 383
>gi|126173839|ref|YP_001049988.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella baltica
OS155]
gi|160874745|ref|YP_001554061.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella baltica
OS195]
gi|217973909|ref|YP_002358660.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella baltica
OS223]
gi|373948995|ref|ZP_09608956.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica OS183]
gi|378707998|ref|YP_005272892.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
baltica OS678]
gi|386325166|ref|YP_006021283.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica BA175]
gi|386340599|ref|YP_006036965.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica OS117]
gi|418023626|ref|ZP_12662611.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica OS625]
gi|166215201|sp|A3D306.1|CLPX_SHEB5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|189044150|sp|A9KWH8.1|CLPX_SHEB9 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763862|sp|B8E5E8.1|CLPX_SHEB2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|125997044|gb|ABN61119.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
baltica OS155]
gi|160860267|gb|ABX48801.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
baltica OS195]
gi|217499044|gb|ACK47237.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
baltica OS223]
gi|315266987|gb|ADT93840.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
baltica OS678]
gi|333819311|gb|AEG11977.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica BA175]
gi|334863000|gb|AEH13471.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica OS117]
gi|353537509|gb|EHC07066.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica OS625]
gi|373885595|gb|EHQ14487.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica OS183]
Length = 426
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 259/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP E+ LD++VIGQ+RAKK AVYNHYKR+ ++S
Sbjct: 65 LPTPHELRAHLDDYVIGQDRAKKV---------------LSVAVYNHYKRLKNAS----- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G +EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF
Sbjct: 105 --------------PKDG---------IELGKSNILLIGPTGSGKTLLAETLARSLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLEKVI 259
Query: 311 SERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R S IGFGA V+ G + S L V+ GDLV YGLIPEFIGR P++
Sbjct: 260 EQRAHVGSGIGFGAQVK------GEKEKATISETLTQVEPGDLVKYGLIPEFIGRLPVVA 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ LVQ+L +PKNAL +QY +F M V+L F +DAL+ IA KAM++ TGARGL
Sbjct: 314 TLTELDEEALVQILSQPKNALTKQYSALFEMEGVELEFREDALKAIAHKAMSRKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E+IL + M++IP V +VD+ V AP
Sbjct: 374 RSIVESILLDTMYDIP----SVDGVVKAVVDESVVKGESAP 410
>gi|410633402|ref|ZP_11344048.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
arctica BSs20135]
gi|410147117|dbj|GAC20915.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
arctica BSs20135]
Length = 425
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 196/402 (48%), Positives = 260/402 (64%), Gaps = 57/402 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLPTPKEI LD++VIGQE AKK AVYNHYKR+ + +
Sbjct: 64 DLPTPKEIHAHLDDYVIGQEHAKKV---------------LSVAVYNHYKRLRNGDVH-- 106
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
E VEL KSN+LLMGPTGSGKTLLA+TLAR+++VP
Sbjct: 107 --------------------------EGVELGKSNILLMGPTGSGKTLLAETLARLLDVP 140
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
FT+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ +
Sbjct: 141 FTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSIT 200
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K
Sbjct: 201 RDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKV 258
Query: 310 ISERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I +R + IGFG+ ++ +++ L+ V+ DLV YGLIPEFIGR P+L
Sbjct: 259 IEQRAHTGTGIGFGSEIK------NISNKAQEGEWLKKVEPEDLVKYGLIPEFIGRLPVL 312
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
L L+ED LVQ+L EPKN+L +QY +F M N +L F +DAL+ IAKKAM + TGARG
Sbjct: 313 TCLEELSEDALVQILREPKNSLTKQYSALFGMENTELEFREDALQAIAKKAMQRKTGARG 372
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E +L + M+++P ++V+ V++D+ + P
Sbjct: 373 LRSIVEAVLLDTMYDLP----SMTNVSKVVIDETVIRGESKP 410
>gi|149916366|ref|ZP_01904886.1| ATP-dependent protease ATP-binding subunit [Roseobacter sp.
AzwK-3b]
gi|149809820|gb|EDM69672.1| ATP-dependent protease ATP-binding subunit [Roseobacter sp.
AzwK-3b]
Length = 420
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 189/375 (50%), Positives = 257/375 (68%), Gaps = 54/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++IC LD++VIGQ AK+ AV+NHYKR+ HS
Sbjct: 63 VPTPQDICAVLDDYVIGQSMAKRV---------------LSVAVHNHYKRLNHSG----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ND +EL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ----------------------KND--IELSKSNILLIGPTGCGKTLLAQTLARILDVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +++++VE AQRGIVYIDEVDKI K+E+ + R
Sbjct: 139 TMADATTLTEAGYVGEDVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT +ILFICGGAF GL++ I
Sbjct: 199 DVSGEGVQQALLKLMEGTVAAVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDRII 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S+R + S++GFGA VR DA T + + ++ DL+ +GLIPEF+GR P++ +
Sbjct: 257 SQRGKGSAMGFGADVRD-------VDARNTGEVFKDLEPEDLLKFGLIPEFVGRLPVIAT 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ LV +L EPKNAL +QY+++F + N +L FTDDAL IA++A+A+ TGARGLR
Sbjct: 310 LEDLDEEALVTILTEPKNALIKQYQRLFELENAQLTFTDDALTAIARRAIARKTGARGLR 369
Query: 431 ALLENILTEAMFEIP 445
++LE+IL MFE+P
Sbjct: 370 SILEDILLNTMFELP 384
>gi|421074040|ref|ZP_15535082.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pelosinus
fermentans JBW45]
gi|392527837|gb|EIW50921.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pelosinus
fermentans JBW45]
Length = 420
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 263/401 (65%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI LD++VIGQ+ AKK+ AVYNHYKR+ S +
Sbjct: 60 DVPKPKEIKDILDQYVIGQDAAKKT---------------LAVAVYNHYKRVNFGSKMDD 104
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
VEL+KSN++++GPTGSGKTLLA+TLA+++NVP
Sbjct: 105 ----------------------------VELQKSNIVMLGPTGSGKTLLAQTLAKLLNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A++GIVYIDE+DKI K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFICGGAF G++K
Sbjct: 197 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFDGIDKL 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
IS R ++GFGA +R+ + LL+ + DL+ +GLIPEF+GR P++V
Sbjct: 255 ISARTGKKNMGFGAEIRSKGKKN-------IGDLLQQILPEDLLKFGLIPEFVGRLPVVV 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+E LV++L+EPKNAL +QY+K ++NV+L F +DAL IAK+A+ +NTGARGL
Sbjct: 308 TLDALDEQALVRILLEPKNALVKQYQKFLEIDNVQLEFKEDALDAIAKEALKRNTGARGL 367
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA++E I+ M+E+P + V V KE V S + P
Sbjct: 368 RAIIEGIMCNVMYEVP----SRADVAKCTVTKEVVLSKEEP 404
>gi|392959641|ref|ZP_10325123.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pelosinus
fermentans DSM 17108]
gi|421052493|ref|ZP_15515482.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pelosinus
fermentans B4]
gi|421058666|ref|ZP_15521333.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pelosinus
fermentans B3]
gi|421066385|ref|ZP_15527999.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pelosinus
fermentans A12]
gi|421070551|ref|ZP_15531683.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pelosinus
fermentans A11]
gi|392443224|gb|EIW20775.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pelosinus
fermentans B4]
gi|392448177|gb|EIW25380.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pelosinus
fermentans A11]
gi|392456194|gb|EIW32948.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pelosinus
fermentans DSM 17108]
gi|392456277|gb|EIW33028.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pelosinus
fermentans A12]
gi|392460321|gb|EIW36636.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pelosinus
fermentans B3]
Length = 420
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 263/401 (65%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI LD++VIGQ+ AKK+ AVYNHYKR+ S +
Sbjct: 60 DVPKPKEIKDILDQYVIGQDAAKKT---------------LAVAVYNHYKRVNFGSKMDD 104
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
VEL+KSN++++GPTGSGKTLLA+TLA+++NVP
Sbjct: 105 ----------------------------VELQKSNIVMLGPTGSGKTLLAQTLAKLLNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A++GIVYIDE+DKI K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFICGGAF G++K
Sbjct: 197 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFDGIDKL 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
IS R ++GFGA +R+ + LL+ + DL+ +GLIPEF+GR P++V
Sbjct: 255 ISARTGKKNMGFGAEIRSKGKKN-------IGDLLQQILPEDLLKFGLIPEFVGRLPVVV 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+E LV++L+EPKNAL +QY+K ++NV+L F +DAL IAK+A+ +NTGARGL
Sbjct: 308 TLDALDEQALVRILLEPKNALVKQYQKFLEIDNVQLEFKEDALDAIAKEALKRNTGARGL 367
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA++E I+ M+E+P + V V KE V S + P
Sbjct: 368 RAIIEGIMCNVMYEVP----SRADVAKCTVTKEVVLSKEEP 404
>gi|398919615|ref|ZP_10658870.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM49]
gi|398923823|ref|ZP_10660916.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM48]
gi|426408622|ref|YP_007028721.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
UW4]
gi|398169637|gb|EJM57615.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM49]
gi|398174660|gb|EJM62449.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM48]
gi|426266839|gb|AFY18916.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
UW4]
Length = 427
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ +ND+ VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKNDD-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTKGGIGFNAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +AK+A+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRSDALKSVAKRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSEVSKVVIDESVIEGKSKP 410
>gi|28870880|ref|NP_793499.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213968835|ref|ZP_03396976.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato T1]
gi|301384119|ref|ZP_07232537.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato Max13]
gi|302059518|ref|ZP_07251059.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato K40]
gi|302135031|ref|ZP_07261021.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato NCPPB 1108]
gi|422660629|ref|ZP_16723037.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. lachrymans str. M302278]
gi|38257469|sp|Q87YR7.1|CLPX_PSESM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|28854129|gb|AAO57194.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213926438|gb|EEB59992.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato T1]
gi|331019230|gb|EGH99286.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. lachrymans str. M302278]
Length = 427
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ +ND+ VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKNDD-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTRGGIGFNAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +A++A+ + TGARGLR
Sbjct: 315 LDELDEAALIQILTEPKNALTKQYAKLFEMEGVDLEFRTDALKSVARRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSDVSKVVIDESVIDGTSKP 410
>gi|383754372|ref|YP_005433275.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381366424|dbj|BAL83252.1| putative ATP-dependent Clp protease ATP-binding subunit ClpX
[Selenomonas ruminantium subsp. lactilytica TAM6421]
Length = 421
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 201/401 (50%), Positives = 263/401 (65%), Gaps = 55/401 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PK+I LD++VIGQ+ AKKS AVYNHYKRI
Sbjct: 60 DVPKPKDIRAILDQYVIGQDDAKKS---------------LAVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N + + VEL+KSN+L++GPTGSGKTLLA+TLA+I+NVP
Sbjct: 97 -------------------NMGLSKGDDVELQKSNILMIGPTGSGKTLLAQTLAKILNVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DATALT+AGYVGED E++L KL+ AAD++VE A+RGIVYIDE+DKI K+E+ +
Sbjct: 138 FAIADATALTEAGYVGEDVENILLKLIQAADYEVEKAERGIVYIDEIDKIARKSENPSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFICGGAF G+EK
Sbjct: 198 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQELIQIDTTNILFICGGAFDGIEKV 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R +GFGA +++ + + + L LL DL+ +GLIPEFIGR P++V
Sbjct: 256 IESRIGQKQMGFGANIKSKKQQRSVGETL--KKLLPE----DLLKHGLIPEFIGRVPVVV 309
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L +L+ED LV +L +PKNAL +QY K+ ++ VKL F DDALRLIAK+A+ + TGARGL
Sbjct: 310 TLDSLDEDALVSILTQPKNALVKQYAKLLELDGVKLSFEDDALRLIAKEALKRKTGARGL 369
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E+I+ M++IP + V A V KE V + P
Sbjct: 370 RSIIESIMCNVMYDIPSIE----GVTACHVTKETVNNKKDP 406
>gi|379008746|ref|YP_005258197.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sulfobacillus
acidophilus DSM 10332]
gi|361055008|gb|AEW06525.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sulfobacillus
acidophilus DSM 10332]
Length = 426
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 197/376 (52%), Positives = 255/376 (67%), Gaps = 53/376 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P P EI LD++V+GQERAKK+ AVYNHYKRI
Sbjct: 61 DIPKPTEIRAILDQYVVGQERAKKT---------------LSVAVYNHYKRIN------- 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
LGS V VEL+KSN+L++GPTGSGKTLLA+TLA+I+NVP
Sbjct: 99 -----------LGSKVDD----------VELQKSNILMLGPTGSGKTLLAQTLAKILNVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A+RGIVYIDEVDKI K+E+ +
Sbjct: 138 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAERGIVYIDEVDKIARKSENPSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFI GGAF G+EK
Sbjct: 198 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTTNILFIVGGAFDGIEKI 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R +GF A ++ G +D + +L + DL+ +GLIPEF+GR PI V
Sbjct: 256 IKNRIGKRGLGFTAEIQ------GKSDVKI-GDVLAKIMPEDLLKFGLIPEFVGRLPITV 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+E+ LVQ+L EP+NAL +QY+KM M+NV+L F DDA+R +A++AM +NTGAR L
Sbjct: 309 TLDALDEEALVQILTEPRNALIKQYQKMLQMDNVELEFKDDAVRAVAREAMRRNTGARAL 368
Query: 430 RALLENILTEAMFEIP 445
RA++E+I+ + M++IP
Sbjct: 369 RAIIEDIMLDVMYDIP 384
>gi|422640407|ref|ZP_16703834.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae Cit 7]
gi|440746733|ref|ZP_20926013.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae BRIP39023]
gi|330952798|gb|EGH53058.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae Cit 7]
gi|440370993|gb|ELQ07858.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae BRIP39023]
Length = 427
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ +ND+ VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKNDD-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTRGGIGFNAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +A++A+ + TGARGLR
Sbjct: 315 LDELDEAALIQILTEPKNALTKQYAKLFEMEGVDLEFRTDALKSVARRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSDVSKVVIDESVIDGTSKP 410
>gi|213521160|gb|ACJ50517.1| ATP-dependent protease ATP-binding subunit [Pseudomonas fluorescens
SS101]
Length = 438
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 76 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 114
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ + DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 115 --------------------DKKGDE-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 153
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 154 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 213
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 214 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 271
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 272 QQRSTRGGIGFSAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 325
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +AK+A+ + TGARGLR
Sbjct: 326 LDELDEAALIQILTEPKNALTKQYGKLFEMEGVDLEFRTDALKSVAKRALERKTGARGLR 385
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 386 SILEGVLLDTMYEIP----SQSEVSKVVIDESVIEGKSKP 421
>gi|253681026|ref|ZP_04861829.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum D str. 1873]
gi|253562875|gb|EES92321.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum D str. 1873]
Length = 431
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 198/394 (50%), Positives = 265/394 (67%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKRI
Sbjct: 60 LPKPSEIKTYLDDYVIGQDSAKKA---------------LAVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N NV+ D+ VEL+KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 96 ------------------NSNVDIDD-VELQKSNILLLGPTGSGKTLLAQTLARLLNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ AD+DVE A+RGI+YIDE+DKI K+E+ + R
Sbjct: 137 AIADATTLTEAGYVGEDVENILLKLIQNADYDVEKAERGIIYIDEIDKIARKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV +VP P G RKHP + I I+T +ILFICGGAF GL+K I
Sbjct: 197 DVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQINTSNILFICGGAFDGLDKII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + SS+GFG+ V++ + L ESV DL+ +GLIPEFIGR PI+V+
Sbjct: 255 EKRTRKSSLGFGSEVKSKEEKD------IGELLKESVPE-DLLKFGLIPEFIGRLPIMVT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L +LN D LV++L EPKNAL +QYKK+ M+NV+L F ++AL+ IA +A+++ TGARGLR
Sbjct: 308 LQSLNNDALVRILKEPKNALVKQYKKLLLMDNVELEFEEEALKSIADEAISRKTGARGLR 367
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E ++ + MF+IP + V+++K+ +
Sbjct: 368 SIIEEVMRDIMFDIP----SKYDIKKVIINKDTI 397
>gi|430762035|ref|YP_007217892.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thioalkalivibrio nitratireducens DSM 14787]
gi|430011659|gb|AGA34411.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thioalkalivibrio nitratireducens DSM 14787]
Length = 425
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 208/424 (49%), Positives = 276/424 (65%), Gaps = 66/424 (15%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E G+ R+S LP P+EI LDE+VIGQ+ AKK IL
Sbjct: 46 NDIIREEMQEAGHAERDS-----LPKPREIRGILDEYVIGQDSAKK-----IL------- 88
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKR+ KSG +VE L KSN+LL
Sbjct: 89 ---SVAVYNHYKRLE----------------------AKSGKDDVE------LSKSNILL 117
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL +D+DV+ A+
Sbjct: 118 IGPTGSGKTLLAETLARVLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKSDYDVDKAE 177
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
GIVYIDE+DKI K+++ + RDVSGEGVQQALLK++EGT +VP P G RKHP+ +
Sbjct: 178 TGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTASVP-PQGG-RKHPQQEF 235
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLE 345
+ +DT++ILFICGGAF GLEK I +R + IGF A VR+ R+G S+ L+
Sbjct: 236 LQVDTRNILFICGGAFSGLEKVIQQRSEKGGIGFSAEVRSKDKDRSG--------SAWLQ 287
Query: 346 SVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKL 405
+++ DLV YGLIPEF+GR P+ +L L+E LV +L +P+NAL +QY ++F M V+L
Sbjct: 288 RLEAEDLVRYGLIPEFVGRLPVQATLEELDEAALVTILTQPRNALVKQYHRLFEMEGVEL 347
Query: 406 HFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVG 465
F DDAL IA+KAM++ TGARGLR+++ENIL + M+E+P + +V+ V++D EAV
Sbjct: 348 EFRDDALSAIARKAMSRKTGARGLRSIMENILLDTMYELPSME----NVSKVVID-EAVI 402
Query: 466 SVDA 469
DA
Sbjct: 403 RGDA 406
>gi|308126598|ref|ZP_05911209.2| ClpX C4-type zinc finger domain protein [Vibrio parahaemolyticus
AQ4037]
gi|308108657|gb|EFO46197.1| ClpX C4-type zinc finger domain protein [Vibrio parahaemolyticus
AQ4037]
Length = 414
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 259/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTPK+I + LD++VIGQ+ AKK AVYNHYKR+
Sbjct: 53 LPTPKQIREHLDDYVIGQDYAKKV---------------LAVAVYNHYKRL--------- 88
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 89 ---------------RNGDTTSEG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 130
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 131 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 190
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 191 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 248
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR+ T L V+ DLV YGLIPEFIGR P+
Sbjct: 249 EQRVATGTGIGFGAEVRSKNETK------TVGELFTQVEPEDLVKYGLIPEFIGRLPVTT 302
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY +F + N +L F +DALR IAKKAM + TGARGL
Sbjct: 303 TLTELDEEALIQILCEPKNALTKQYAALFELENAELEFREDALRAIAKKAMERKTGARGL 362
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE++L E M+E+P + V+ V++D+ + P
Sbjct: 363 RSILESVLLETMYELP----SATDVSKVVIDESVINGESEP 399
>gi|375264872|ref|YP_005022315.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio sp. EJY3]
gi|369840196|gb|AEX21340.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio sp. EJY3]
Length = 426
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 258/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTPK+I + LD++VIGQ+ AKK AVYNHYKR+
Sbjct: 65 LPTPKQIREHLDDYVIGQDYAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 ---------------RNGDTTSEG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR+ T L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVATGTGIGFGAEVRSKNETK------TVGELFTQVEPEDLVKYGLIPEFIGRLPVTT 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY +F + N +L F +DALR IAKKAM + TGARGL
Sbjct: 315 TLTELDEEALIQILCEPKNALTKQYAALFELENAELEFREDALRAIAKKAMERKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P + V+ V++D+ + P
Sbjct: 375 RSILEGVLLETMYELP----SATDVSKVVIDESVINGESEP 411
>gi|153000123|ref|YP_001365804.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella baltica
OS185]
gi|166215202|sp|A6WLQ2.1|CLPX_SHEB8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|151364741|gb|ABS07741.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
baltica OS185]
Length = 426
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 259/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP E+ LD++VIGQ+RAKK AVYNHYKR+ ++S
Sbjct: 65 LPTPHELRAHLDDYVIGQDRAKKV---------------LSVAVYNHYKRLKNAS----- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G +EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF
Sbjct: 105 --------------PKDG---------IELGKSNILLIGPTGSGKTLLAETLARSLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLEKVI 259
Query: 311 SERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R S IGFGA V+ G + S L V+ GDLV YGLIPEFIGR P++
Sbjct: 260 EQRAHVGSGIGFGAQVK------GEKEKATISETLTQVEPGDLVKYGLIPEFIGRLPVVA 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ LVQ+L +PKNAL +QY +F M V+L F +DAL+ IA KAM++ TGARGL
Sbjct: 314 TLTELDEEALVQILSQPKNALTKQYSALFEMEGVELEFREDALKAIAHKAMSRKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E+IL + M++IP V +VD+ V AP
Sbjct: 374 RSIVESILLDTMYDIP----SVDGVVKAVVDESVVKGESAP 410
>gi|240850275|ref|YP_002971668.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Bartonella
grahamii as4aup]
gi|240267398|gb|ACS50986.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Bartonella
grahamii as4aup]
Length = 424
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 193/375 (51%), Positives = 255/375 (68%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI LD++VIGQ+ AK+ AV+NHYKR+ H S
Sbjct: 65 VPTPQEIITVLDDYVIGQQHAKRV---------------LSVAVHNHYKRLAHQS----- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KS ND +EL KSN+LL+GPTG GKT LA+TLARI++VPF
Sbjct: 105 ---------------KS------ND--IELAKSNILLVGPTGCGKTYLAQTLARIIDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI KA++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKADNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT +ILFICGGAF GLE+ I
Sbjct: 202 DVSGEGVQQALLKIMEGTIASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERII 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGF A V+A D + ++ DL+ +GLIPEFIGR PI+ +
Sbjct: 260 SGRGEKTSIGFSATVKA-------PDERCVGEIFRDLEPEDLIKFGLIPEFIGRLPIVAT 312
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ + L+Q+L +PKNAL +QY+++F M NV+L F +DALR+IAKKA+ + TGARGLR
Sbjct: 313 LEDLDVNALMQILSQPKNALVKQYQRLFEMENVELSFHEDALRVIAKKAIERKTGARGLR 372
Query: 431 ALLENILTEAMFEIP 445
+++E IL E MFE+P
Sbjct: 373 SIMEKILLETMFELP 387
>gi|260575567|ref|ZP_05843565.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodobacter
sp. SW2]
gi|259022210|gb|EEW25508.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodobacter
sp. SW2]
Length = 421
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 197/415 (47%), Positives = 274/415 (66%), Gaps = 62/415 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++ICK LD++VIGQ AK+ AV+NHYKR+ HSS
Sbjct: 63 VPTPRDICKVLDDYVIGQIHAKRV---------------LSVAVHNHYKRLNHSS----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ D +EL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ----------------------KTD--IELSKSNILLIGPTGCGKTLLAQTLARILDVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 139 TMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 199 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGLEKII 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
++R + S+IGFGA V+ G L + ++ DL+ +GLIPEF+GR P++ +
Sbjct: 257 AQRNKGSAIGFGAEVKGPEDRG-------VGELFKELEPEDLLKFGLIPEFVGRLPVIAT 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L+E LV +L EPKNAL +QY+++F + V L FT DAL IAK+A+ + TGARGLR
Sbjct: 310 LTDLDEAALVTILTEPKNALVKQYQRLFEIEGVTLTFTPDALVAIAKRAIKRKTGARGLR 369
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELER 485
+++E+IL + MFE+P G + V V+V ++AV + G ++H + + E+
Sbjct: 370 SIMEDILLDTMFELP----GMAGVTEVVVKEDAVNA----GAKPLLVHAEAKKEK 416
>gi|395778318|ref|ZP_10458830.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
elizabethae Re6043vi]
gi|395417526|gb|EJF83863.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
elizabethae Re6043vi]
Length = 424
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 192/375 (51%), Positives = 253/375 (67%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI LD++VIGQ+ AK+ AV+NHYKR+ H S
Sbjct: 65 VPTPQEIISVLDDYVIGQQHAKRV---------------LSVAVHNHYKRLAHQS----- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KS + +EL KSN+LL+GPTG GKT LA+TLARI++VPF
Sbjct: 105 ---------------KSSD--------IELAKSNILLVGPTGCGKTYLAQTLARIIDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI KA++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKADNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT +ILFICGGAF GLE+ I
Sbjct: 202 DVSGEGVQQALLKIMEGTIASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERII 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGF A V+A D + ++ DL+ +GLIPEFIGR PI+ +
Sbjct: 260 SGRGEKTSIGFSATVKA-------PDERCVGEIFRDLEPEDLIKFGLIPEFIGRLPIVAT 312
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ + LVQ+L +PKNAL +QY+++F M NV+L F +DALR IAKKA+ + TGARGLR
Sbjct: 313 LEDLDINALVQILSQPKNALVKQYQRLFEMENVELAFHEDALRAIAKKAIERKTGARGLR 372
Query: 431 ALLENILTEAMFEIP 445
+++E IL E MFE+P
Sbjct: 373 SIMEKILLETMFELP 387
>gi|307244054|ref|ZP_07526173.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Peptostreptococcus stomatis DSM 17678]
gi|306492578|gb|EFM64612.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Peptostreptococcus stomatis DSM 17678]
Length = 421
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 199/405 (49%), Positives = 265/405 (65%), Gaps = 62/405 (15%)
Query: 67 EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSS 126
EGN LP PKEI L+++VIGQ +AKK+ AVYNHYKRIY
Sbjct: 56 EGN--LPKPKEIMAILNDYVIGQNKAKKA---------------LSVAVYNHYKRIY--- 95
Query: 127 LQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARI 186
G + S E +E++KSN+LL+GPTGSGKTLLA+TLA+I
Sbjct: 96 ----------------GDKIAS--------EDIEIQKSNILLLGPTGSGKTLLAQTLAKI 131
Query: 187 VNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAES 245
+NVPF I DAT+LT+AGYVGED E+++ KL+ AADFD+E AQRGI+YIDE+DKI K+++
Sbjct: 132 LNVPFAIADATSLTEAGYVGEDVENIVLKLVQAADFDIEKAQRGIIYIDEIDKISRKSDN 191
Query: 246 RNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVG 305
+ RDVSGEGVQQALLK+LEGTV NV P +G RKHP + + +DT +ILFI GGAF G
Sbjct: 192 PSITRDVSGEGVQQALLKILEGTVANV--PPSGGRKHPHQEFLKVDTTNILFILGGAFDG 249
Query: 306 LEKTISERRQDSSIGFGAPV--RANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIG 363
+EK + +R +D +GFGA + + +M G L ++ DL+ YGLIPEF+G
Sbjct: 250 IEKIVQKRGKDKVLGFGAKIESKTDMDIGKLYSQVIPD---------DLLKYGLIPEFVG 300
Query: 364 RFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKN 423
R P+L +L L+E+ LV++L EPKN+L +QY K+F ++ KL F +AL IAKKA+ +N
Sbjct: 301 RIPVLATLDLLDEESLVKILTEPKNSLVKQYTKLFEYDDTKLEFEPEALSAIAKKAIDRN 360
Query: 424 TGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVD 468
TGARGLR+++E+ L E M+EIP +V VLV KE + D
Sbjct: 361 TGARGLRSIIEHSLMETMYEIP----SLENVEKVLVTKECIEDKD 401
>gi|121997403|ref|YP_001002190.1| ATP-dependent protease ATP-binding subunit ClpX [Halorhodospira
halophila SL1]
gi|167009016|sp|A1WUM6.1|CLPX_HALHL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|121588808|gb|ABM61388.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Halorhodospira halophila SL1]
Length = 426
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 192/400 (48%), Positives = 257/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI + LD++VIGQE AKK AVYNHYKR+ + Q +
Sbjct: 66 LPRPHEINRELDQYVIGQEHAKKV---------------LSVAVYNHYKRLESRTSQDD- 109
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 110 ---------------------------VELTKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DK+ KA++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQHGIVYIDEIDKVSRKADNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT ++LFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTTASVP-PQGG-RKHPQQEFVQVDTSNMLFICGGAFAGLDKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
ER + IGF A ++ + + L++V+ DLV YGLIPEF+GR P++ +
Sbjct: 261 QERSERGGIGFSAEIKGEGERASVGET------LQTVEPSDLVRYGLIPEFVGRLPVIAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L+++ LVQ+L EPKNAL +QY+K+F M V+L DDALR +A KAM + TGARGLR
Sbjct: 315 LNELDQEALVQILREPKNALVKQYQKLFEMEGVELDLRDDALRAVADKAMERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++E +L E M+E+P + +V+ V+VD+ + P
Sbjct: 375 TIIEQVLLETMYELPSME----NVSKVVVDESVIAGDSDP 410
>gi|449019668|dbj|BAM83070.1| probable ATP-dependent Clp protease regulatory subunit CLPX
[Cyanidioschyzon merolae strain 10D]
Length = 715
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 185/309 (59%), Positives = 233/309 (75%), Gaps = 16/309 (5%)
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
D VE EKSN+LL+GPTGSGKTLLAK+LAR VPF + DAT LTQAGYVGED ES+L++
Sbjct: 377 DHCVEFEKSNILLLGPTGSGKTLLAKSLARKCRVPFVMVDATTLTQAGYVGEDVESILHR 436
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
LL AADFD+ AQRGIVYIDE+DKI K+ES + RDVSGEGVQQALLKMLEG++VNV
Sbjct: 437 LLQAADFDLNLAQRGIVYIDEIDKISRKSESPSITRDVSGEGVQQALLKMLEGSIVNV-- 494
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
P+ G RK+PR + IP+DT++ILFICGGAF GLE+ + R +SIGFGA V A
Sbjct: 495 PEKGGRKNPRAEYIPMDTRNILFICGGAFSGLERIVGHRLAATSIGFGAHVAA------- 547
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
+DA V +LL+ V+S DL+ YGL+PEF+GR PI+V+L AL E QLVQVL EP+NAL RQ+
Sbjct: 548 SDA-VDDALLDHVESTDLIRYGLVPEFVGRLPIVVNLRALTEPQLVQVLTEPRNALVRQF 606
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSV 454
++MF M+ V +H TD ALR +A++A+ K GARGLR +LE +L + F++P + T
Sbjct: 607 REMFRMSGVDMHITDQALRAVAREAVHKGVGARGLRGILERVLLDCQFDLPGKEGQT--- 663
Query: 455 NAVLVDKEA 463
VL+D EA
Sbjct: 664 --VLIDYEA 670
>gi|387894466|ref|YP_006324763.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
fluorescens A506]
gi|423692341|ref|ZP_17666861.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens SS101]
gi|387159491|gb|AFJ54690.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens A506]
gi|388000622|gb|EIK61951.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens SS101]
Length = 427
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ + DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKGDE-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QQRSTRGGIGFSAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +AK+A+ + TGARGLR
Sbjct: 315 LDELDEAALIQILTEPKNALTKQYGKLFEMEGVDLEFRTDALKSVAKRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSEVSKVVIDESVIEGKSKP 410
>gi|378951823|ref|YP_005209311.1| protein ClpX [Pseudomonas fluorescens F113]
gi|359761837|gb|AEV63916.1| ClpX [Pseudomonas fluorescens F113]
Length = 427
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 199/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+ Q++
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLN----QRDK 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
SD VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 106 KSDD-----------------------VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTRGGIGFNAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +AK+A+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRSDALKSVAKRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSEVSKVVIDESVIEGKSKP 410
>gi|399002987|ref|ZP_10705661.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM18]
gi|398123673|gb|EJM13214.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM18]
Length = 427
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ +ND+ VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKNDD-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTKGGIGFSAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +AK+A+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRADALKSVAKRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSEVSKVVIDESVIEGKSKP 410
>gi|352101156|ref|ZP_08958579.1| ATP-dependent protease ATP-binding subunit ClpX [Halomonas sp.
HAL1]
gi|350600640|gb|EHA16701.1| ATP-dependent protease ATP-binding subunit ClpX [Halomonas sp.
HAL1]
Length = 426
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 265/400 (66%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP+EI LD++VIGQ+RAK M++ V AVYNHYKR
Sbjct: 65 LPTPREIRHTLDDYVIGQDRAK----------MVLSV-----AVYNHYKR---------- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
L + V+ G+ VEL KSN+LL+GPTGSGKTLLA+T+AR++NVPF
Sbjct: 100 ----------LKTDVRDGD--------VELGKSNILLIGPTGSGKTLLAETMARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE A+RGIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAERGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT +VP P G RKHP+ + + ++T +ILFI GGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTTASVP-PQGG-RKHPQQEFVQVNTGNILFIVGGAFAGLEKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + IGF A V++ + G+ LL V+ DLV +GLIPEF+GR PI+ +
Sbjct: 260 RDRAEKGGIGFNAAVKSKESSRGV------GELLADVEPDDLVKFGLIPEFVGRLPIIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L ED LVQ+L EPKN+L +QY K+F M +V L F D+ALR +A+KAM + TGARGLR
Sbjct: 314 LTELTEDALVQILTEPKNSLVKQYAKLFEMEDVTLEFRDEALRAVAEKAMERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE++L + M+EIP + V+ V++D + P
Sbjct: 374 SILESVLLDTMYEIPSLE----GVSKVVIDGSVIAGESEP 409
>gi|423096201|ref|ZP_17083997.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens Q2-87]
gi|423696405|ref|ZP_17670895.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens Q8r1-96]
gi|388003112|gb|EIK64439.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens Q8r1-96]
gi|397884545|gb|EJL01028.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens Q2-87]
Length = 427
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ +ND+ VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKNDD-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTRGGIGFNAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +AK+A+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRSDALKSVAKRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSEVSKVVIDESVIEGKSKP 410
>gi|338739741|ref|YP_004676703.1| ATP-dependent Clp protease, ATP-binding subunit [Hyphomicrobium sp.
MC1]
gi|337760304|emb|CCB66135.1| ATP-dependent Clp protease, ATP-binding subunit [Hyphomicrobium sp.
MC1]
Length = 416
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 197/389 (50%), Positives = 259/389 (66%), Gaps = 53/389 (13%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
N+N + +PTP+EIC LD +VIGQ AK+ AV+NHYK
Sbjct: 47 NKNTLVKSRDGVPTPQEICGVLDSYVIGQNHAKRV---------------LSVAVHNHYK 91
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
R+ H+S ND VEL KSN+LL+GPTGSGKTLLA
Sbjct: 92 RLNHASKN--------------------------ND--VELAKSNILLVGPTGSGKTLLA 123
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+TLARI++VPFT+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI
Sbjct: 124 QTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKI 183
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFIC
Sbjct: 184 SRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFIC 241
Query: 300 GGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIP 359
GGAF GLEK IS R + SSIGF A V D T +L +V+ DL+ +GLIP
Sbjct: 242 GGAFAGLEKIISRRGKGSSIGFQARVSG-------PDERRTGEILRNVEPEDLLKFGLIP 294
Query: 360 EFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKA 419
EFIGR P++ +L L+E LVQ+L EPKNA+ +QY+++F M +VKL T DAL+ I++KA
Sbjct: 295 EFIGRLPVIATLEDLDESALVQILTEPKNAIVKQYQRLFEMEDVKLTITLDALKAISRKA 354
Query: 420 MAKNTGARGLRALLENILTEAMFEIPETK 448
+ + TGARGLR+++E IL + M+++P K
Sbjct: 355 IERKTGARGLRSIMEGILLDTMYDLPTLK 383
>gi|294141767|ref|YP_003557745.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
violacea DSS12]
gi|293328236|dbj|BAJ02967.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
violacea DSS12]
Length = 418
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 201/401 (50%), Positives = 260/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP E+ LD++VIGQE+AKK AVYNHYKR+ +S+
Sbjct: 58 LPTPHELRAHLDDYVIGQEKAKKV---------------LSVAVYNHYKRLKNSN----- 97
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G VEL KSN+LL+GPTGSGKTLLA+T AR ++VPF
Sbjct: 98 --------------PKDG---------VELGKSNILLIGPTGSGKTLLAETFARFLDVPF 134
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 135 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 194
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GLEK I
Sbjct: 195 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFSGLEKVI 252
Query: 311 SERRQDSS-IGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R Q S IGFGA ++ G +D S +L V+ DLV YGLIPEFIGR P+L
Sbjct: 253 EQRSQTGSGIGFGAQIK------GESDKATISEILMQVEPEDLVKYGLIPEFIGRLPVLS 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+ED LVQ+L EPKNAL +Q+ +F M V+L F +DAL+ IA KAM + TGARGL
Sbjct: 307 TLAELDEDALVQILSEPKNALTKQFAALFEMEGVELEFREDALKAIAAKAMTRKTGARGL 366
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E IL + M+++P V V++D+ V +P
Sbjct: 367 RSIVEGILLDIMYDLP----SVDDVAKVVIDESVVKGESSP 403
>gi|410662926|ref|YP_006915297.1| ATP-dependent protease ATP-binding subunit ClpX [Simiduia
agarivorans SA1 = DSM 21679]
gi|409025283|gb|AFU97567.1| ATP-dependent protease ATP-binding subunit ClpX [Simiduia
agarivorans SA1 = DSM 21679]
Length = 432
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 265/407 (65%), Gaps = 53/407 (13%)
Query: 66 SEGNID-LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYH 124
SEG+ LPTP+EI + LD++VIGQ+ AKK AVYNHYKR+
Sbjct: 60 SEGDSSKLPTPQEISETLDQYVIGQKVAKKV---------------LAVAVYNHYKRLRT 104
Query: 125 SSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLA 184
S K G ++ E VEL KSN+LL+GPTGSGKTLLA+TLA
Sbjct: 105 SD--------------------KGG----KDKEPVELGKSNILLVGPTGSGKTLLAETLA 140
Query: 185 RIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KA 243
R++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ+GIVYIDE+DKI K+
Sbjct: 141 RMLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQQGIVYIDEIDKISRKS 200
Query: 244 ESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAF 303
++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF
Sbjct: 201 DNPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTANILFICGGAF 258
Query: 304 VGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIG 363
GL+K I +R + IGFGA V++ D +L V+ DLV YGLIPEFIG
Sbjct: 259 AGLDKVIRDRSEKGGIGFGAEVKSK------DDKRNVGEVLRDVEPEDLVRYGLIPEFIG 312
Query: 364 RFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKN 423
R P++ +L L++D L+ +L EP+NAL +QY K+F M V++ F DAL +A+KAM +
Sbjct: 313 RLPVIATLEELDKDALITILTEPRNALTKQYSKLFEMEGVEVDFRPDALSAVAQKAMDRK 372
Query: 424 TGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
TGARGLR+++EN+L + M+ IP K V+ V+VD+ + P
Sbjct: 373 TGARGLRSIMENVLLDTMYRIPSEK----GVSKVVVDESVIKGESEP 415
>gi|395766798|ref|ZP_10447336.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
doshiae NCTC 12862]
gi|395415410|gb|EJF81844.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
doshiae NCTC 12862]
Length = 424
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 199/411 (48%), Positives = 268/411 (65%), Gaps = 68/411 (16%)
Query: 36 EIMGGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKS 95
E+ IR++ +S+GI++ +PTP++I LD++VIGQ+ AK+
Sbjct: 44 ELCMDIIREENKSSGIKARD---------------GVPTPQQIITVLDDYVIGQQHAKRV 88
Query: 96 HIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEN 155
AV+NHYKR+ H S KS N
Sbjct: 89 ---------------LSVAVHNHYKRLAHQS--------------------KS------N 107
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
D +EL KSN+LL+GPTG GKT LA+TLARI++VPFT+ DAT LT+AGYVGED E+++ K
Sbjct: 108 D--IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILK 165
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
LL AAD++VE AQRGIVYIDEVDKI KA++ + RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQAADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVP- 224
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
P G RKHP+ + + +DT +ILFICGGAF GLE+ IS R + +SIGF A V+A
Sbjct: 225 PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA------- 276
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
D + ++ DL+ +GLIPEFIGR PI+ +L L+ + LVQ+L +PKNAL +QY
Sbjct: 277 PDERCVGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALVQILSQPKNALVKQY 336
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP 445
+++F M NV+L F +DALR+IAKKA+ + TGARGLR+++E IL E MFE+P
Sbjct: 337 QRLFEMENVELAFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFELP 387
>gi|121593622|ref|YP_985518.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax sp.
JS42]
gi|222110342|ref|YP_002552606.1| ATP-dependent protease ATP-binding subunit clpx [Acidovorax ebreus
TPSY]
gi|166214752|sp|A1W5B7.1|CLPX_ACISJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763845|sp|B9MG15.1|CLPX_ACIET RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|120605702|gb|ABM41442.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acidovorax
sp. JS42]
gi|221729786|gb|ACM32606.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acidovorax
ebreus TPSY]
Length = 421
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 201/405 (49%), Positives = 264/405 (65%), Gaps = 55/405 (13%)
Query: 67 EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSS 126
EG DLPTP EI LD +VIGQE+AK++ AVYNHYKR+ H
Sbjct: 60 EGRGDLPTPAEIKTNLDHYVIGQEKAKRT---------------LAVAVYNHYKRLRHKD 104
Query: 127 LQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARI 186
K+G DE VEL KSN+LL+GPTGSGKTLLA+TLAR
Sbjct: 105 --------------------KAGK-----DE-VELSKSNILLIGPTGSGKTLLAQTLARQ 138
Query: 187 VNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAES 245
++VPF + DAT LT+AGYVGED E+++ KLL + ++DVE AQRGIVYIDE+DKI K+++
Sbjct: 139 LDVPFVMADATTLTEAGYVGEDVENIVQKLLQSCNYDVERAQRGIVYIDEIDKISRKSDN 198
Query: 246 RNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVG 305
+ RDVSGEGVQQALLK++EGT+ +VP P G RKHP D + IDT +ILFICGGAF G
Sbjct: 199 PSITRDVSGEGVQQALLKLIEGTMASVP-PQGG-RKHPNQDFLQIDTTNILFICGGAFAG 256
Query: 306 LEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRF 365
LEK I R + S IGFGA VR+ + LT+ + + ++ DL+ +GLIPE +GR
Sbjct: 257 LEKVIENRTEASGIGFGAAVRSK-KQRSLTE------VFQDIEPEDLIKFGLIPELVGRM 309
Query: 366 PILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTG 425
P++ +L+ L+ED LVQ+L EPKNAL +QY K+ +M V+L AL+ IA+KA+A+ TG
Sbjct: 310 PVVTALAELSEDALVQILTEPKNALVKQYSKLLAMEGVELEIRPAALKSIARKAIARKTG 369
Query: 426 ARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
ARGLR++LE L MF++P S+V V+VD+ + AP
Sbjct: 370 ARGLRSILEQALIGTMFDLP----NVSNVEKVVVDEATIEENKAP 410
>gi|429766107|ref|ZP_19298381.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
celatum DSM 1785]
gi|429185087|gb|EKY26076.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
celatum DSM 1785]
Length = 432
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 192/401 (47%), Positives = 269/401 (67%), Gaps = 59/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+RAKK+ AVYNHYKR+ +++
Sbjct: 61 LPKPSEIKAYLDQYVIGQDRAKKA---------------LSVAVYNHYKRVKSNTI---- 101
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
D+ +EL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF
Sbjct: 102 ------------------------DDDIELQKSNILLLGPTGSGKTLLAQTLAKFLNVPF 137
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ AD+DVE A+RGI+YIDE+DKI K+E+ + R
Sbjct: 138 AIADATTLTEAGYVGEDVENILLKLIQNADYDVEKAERGIIYIDEIDKIARKSENPSITR 197
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGT +VP P G RKHP + I I+T +ILFICGGAF G+EK I
Sbjct: 198 DVSGEGVQQALLKILEGTTASVP-PQGG-RKHPHQEFIQINTSNILFICGGAFDGIEKII 255
Query: 311 SERRQDSSIGFGAPVRAN-MRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + S +GFGA +++ M+ G +L+++ DL+ +GLIPEF+GR P++V
Sbjct: 256 QKRTRVSQMGFGAEIQSKEMKDVG--------EVLKNILPEDLLKFGLIPEFVGRLPMVV 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SL +L+++ L+ +L +PKNAL +QY K+F ++NV+L FT++AL+ IA +A+A+ TGARGL
Sbjct: 308 SLESLDQNALINILSQPKNALVKQYSKLFEIDNVELEFTEEALKAIADEAIARKTGARGL 367
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA++E+I+ + MFEIP + V++ +EA+ S P
Sbjct: 368 RAIVEDIMIDIMFEIP----SDEQITKVVITEEAIKSKTFP 404
>gi|347753001|ref|YP_004860566.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Bacillus
coagulans 36D1]
gi|347585519|gb|AEP01786.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Bacillus
coagulans 36D1]
Length = 422
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 206/424 (48%), Positives = 273/424 (64%), Gaps = 62/424 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P P EI + L E+VIGQE+AKKS AVYNHYKRI
Sbjct: 60 DIPKPHEIREILAEYVIGQEQAKKS---------------LAVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N N + DE VEL KSN+ L+GPTGSGKTLLA+TLARI+NVP
Sbjct: 97 -------------------NSNSKIDE-VELAKSNICLIGPTGSGKTLLAQTLARILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A++GI+YIDE+DKI K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIIYIDEIDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFICGGAF G+++
Sbjct: 197 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFDGIDQI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R IGFG ++ D L SLL+ V DL+++GLIPEFIGR P++
Sbjct: 255 IKRRLGKKVIGFGTDLK--------NDELDEQSLLKHVLPEDLLSFGLIPEFIGRLPVIA 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+E+ L+++L EPKNAL +QYKKM +++V+L F DAL+ IAKKA+ + TGARGL
Sbjct: 307 TLEQLDEEALIKILTEPKNALVKQYKKMLELDHVELEFEQDALKEIAKKAIERKTGARGL 366
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHE 489
R+++E I+ + MF++P + +V KE+V + P +++ DG + +
Sbjct: 367 RSIIEGIMLDVMFDLP----SREDIEKCIVTKESVLDKEFP----RLVLKDGTVIEGSDQ 418
Query: 490 TKSA 493
TKSA
Sbjct: 419 TKSA 422
>gi|148381179|ref|YP_001255720.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum A str. ATCC 3502]
gi|153932077|ref|YP_001385554.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum A str. ATCC 19397]
gi|153935476|ref|YP_001388960.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum A str. Hall]
gi|153938984|ref|YP_001392581.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum F str. Langeland]
gi|168179120|ref|ZP_02613784.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum NCTC 2916]
gi|168183547|ref|ZP_02618211.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum Bf]
gi|170756735|ref|YP_001782869.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum B1 str. Okra]
gi|226950658|ref|YP_002805749.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum A2 str. Kyoto]
gi|237796686|ref|YP_002864238.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum Ba4 str. 657]
gi|384463548|ref|YP_005676143.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
botulinum F str. 230613]
gi|387819500|ref|YP_005679847.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
botulinum H04402 065]
gi|421839010|ref|ZP_16272697.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum CFSAN001627]
gi|429247533|ref|ZP_19210775.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum CFSAN001628]
gi|166989835|sp|A7FYI1.1|CLPX_CLOB1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167008726|sp|A5I6W0.1|CLPX_CLOBH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167009011|sp|A7GIH1.1|CLPX_CLOBL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|229889850|sp|B1IND6.1|CLPX_CLOBK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763840|sp|C1FLA5.1|CLPX_CLOBJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|259491253|sp|C3KU76.1|CLPX_CLOB6 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|148290663|emb|CAL84792.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
botulinum A str. ATCC 3502]
gi|152928121|gb|ABS33621.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum A str. ATCC 19397]
gi|152931390|gb|ABS36889.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum A str. Hall]
gi|152934880|gb|ABS40378.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum F str. Langeland]
gi|169121947|gb|ACA45783.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum B1 str. Okra]
gi|182670079|gb|EDT82055.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum NCTC 2916]
gi|182673331|gb|EDT85292.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum Bf]
gi|226844071|gb|ACO86737.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum A2 str. Kyoto]
gi|229262137|gb|ACQ53170.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum Ba4 str. 657]
gi|295320565|gb|ADG00943.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum F str. 230613]
gi|322807544|emb|CBZ05119.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
botulinum H04402 065]
gi|409736335|gb|EKN37767.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum CFSAN001627]
gi|428755427|gb|EKX78056.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum CFSAN001628]
Length = 429
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 199/402 (49%), Positives = 264/402 (65%), Gaps = 54/402 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQE AKKS AVYNHYKRI
Sbjct: 60 LPKPTEIKTYLDQYVIGQEDAKKS---------------LSVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N N ND+ VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF
Sbjct: 96 ------------------NSNTNNDD-VELQKSNILLLGPTGSGKTLLAQTLAKFLNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ AD+D+E A++GIVYIDE+DKI K+E+ + R
Sbjct: 137 AIADATTLTEAGYVGEDVENILLKLIQNADYDIEKAEKGIVYIDEIDKIARKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV VP P G RKHP + I I+T +ILFICGGAF G++K I
Sbjct: 197 DVSGEGVQQALLKILEGTVAAVP-PQGG-RKHPHQEFIQINTTNILFICGGAFDGVDKII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R + SS+GFGA +++ LL+ + GDL+ +GLIPEFIGR PI+V+
Sbjct: 255 ERRTRTSSLGFGAEIQSKKEKD-------LGKLLKDIMPGDLLKFGLIPEFIGRLPIVVT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ + L+++L EPKNAL +QYKK+F +++V+L F +AL+ IA +A+ +NTGARGLR
Sbjct: 308 LDKLDREALIKILTEPKNALVKQYKKLFELDDVELEFNQEALKEIADEAINRNTGARGLR 367
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEAVGSVDAPG 471
A++E+++ E MF+IP + IG VN + + ++A G
Sbjct: 368 AIIEDMMREIMFDIPSQENIGKVIVNEDCIKTKKPELIEAEG 409
>gi|392375229|ref|YP_003207062.1| ATP-dependent Clp protease ATP-binding subunit clpX [Candidatus
Methylomirabilis oxyfera]
gi|258592922|emb|CBE69231.1| ATP-dependent Clp protease ATP-binding subunit clpX [Candidatus
Methylomirabilis oxyfera]
Length = 415
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 260/401 (64%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LP P EI LD++VIGQ+RAKKS AV+NHYKR+
Sbjct: 60 ELPKPSEIKSILDQYVIGQDRAKKS---------------LAVAVHNHYKRV-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N + D+ VEL KSN+LL+GPTG GKTLLA+TLA+I++VP
Sbjct: 97 -------------------NARMTFDD-VELTKSNILLIGPTGCGKTLLAQTLAKILDVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
FTI DAT LT+AGYVGED E+++ +LL AD+DVE A+RGI+YIDE+DKI K+E+ +
Sbjct: 137 FTIADATTLTEAGYVGEDVENIILRLLQVADYDVERAERGIIYIDEIDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV NVP P G RKHP+ + + +DT +ILFICGGAFVGLEK
Sbjct: 197 RDVSGEGVQQALLKILEGTVANVP-PQGG-RKHPQQEYLQVDTTNILFICGGAFVGLEKA 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R S+GFGA ++A R G S LL V DL+ YGLIPE +GR P++
Sbjct: 255 IEHRTGQKSMGFGAEIQA--RRGRR-----ISELLAHVQPEDLLRYGLIPELVGRLPVMA 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+ L+E LV++L+EPKNAL RQY++ F +VKL FTDDA+ +A++A + TGARGL
Sbjct: 308 VVHELDEKALVRILVEPKNALLRQYQRFFDFEHVKLTFTDDAISAVAQEAAKRQTGARGL 367
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA+LE I+ + M+EIP S + ++++E V AP
Sbjct: 368 RAILEEIMLDIMYEIP----SQSGIAECIINRETVVERKAP 404
>gi|188578370|ref|YP_001915299.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas oryzae
pv. oryzae PXO99A]
gi|238689531|sp|B2SMI2.1|CLPX_XANOP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|188522822|gb|ACD60767.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
oryzae pv. oryzae PXO99A]
Length = 428
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 201/424 (47%), Positives = 271/424 (63%), Gaps = 62/424 (14%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E R+S LP P+EI + LD++VIGQ RAK++
Sbjct: 48 NDIIREELEEKAQSARSS-----LPKPREILEVLDQYVIGQLRAKRT------------- 89
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKRI S +ND+ VEL KSN+LL
Sbjct: 90 --LAVAVYNHYKRIESRS---------------------------KNDD-VELAKSNILL 119
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ
Sbjct: 120 VGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQ 179
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
+GIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ +
Sbjct: 180 QGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEF 237
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQDS-SIGFGAPVRANMRTGGLTDALVTSSLLES 346
+ +DTK+ILFICGGAF GL+K I +R D+ IGFG V+++ R + +L
Sbjct: 238 LQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGVKVKSSERKQEV------GKILAE 291
Query: 347 VDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLH 406
V+ DL+ +GLIPEF+GR P++ +L L+E L+++L EPKNA+ +Q+KK+F M V+L
Sbjct: 292 VEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFDMEGVELE 351
Query: 407 FTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
F DAL IAKKA+ + TGARGLR ++E++L + M+E+P +V+ V+VD+ +
Sbjct: 352 FRADALSAIAKKALKRKTGARGLRTIVESVLLDTMYELP----SQENVSKVVVDESVIEH 407
Query: 467 VDAP 470
P
Sbjct: 408 KSEP 411
>gi|406990092|gb|EKE09781.1| hypothetical protein ACD_16C00110G0016 [uncultured bacterium]
Length = 423
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 205/430 (47%), Positives = 280/430 (65%), Gaps = 59/430 (13%)
Query: 20 TPLEGSFIELGKVKVEEIMGG---FIRKDGESNGIESESETENGNRNRNSEGNIDLPTPK 76
+PL SF + +V +++ G FI + + E G R+ EG +P PK
Sbjct: 11 SPLYCSFCGKSQHEVRKLIAGPSVFICDECVDLCTDIIKEENKGPLVRSPEG---IPAPK 67
Query: 77 EICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHL 136
+I + L+++VIGQ+RAKK AV+NHYKR+ H +
Sbjct: 68 QIYEVLNDYVIGQDRAKKV---------------LSVAVHNHYKRLDHRN---------- 102
Query: 137 YVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDA 196
SG+ VEL KSN+LL+GPTG GKTLLA+TLARI++VPFT+ DA
Sbjct: 103 ----------HSGD--------VELSKSNILLVGPTGCGKTLLAQTLARIIDVPFTMADA 144
Query: 197 TALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGE 255
T LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + RDVSGE
Sbjct: 145 TTLTEAGYVGEDVENIILKLLQAADYNVEKAQRGIVYIDEVDKISRKSDNPSITRDVSGE 204
Query: 256 GVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQ 315
GVQQALLK++EGT+ +V P G RKHP+ + + +DT +ILFICGGAF G+EK IS R +
Sbjct: 205 GVQQALLKIMEGTIASV--PPQGGRKHPQQEFLQVDTTNILFICGGAFAGIEKLISLRGK 262
Query: 316 DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALN 375
++IGFGA VR D T LL+ +++ DL+ +GLIPEFIGR PI+ +L L+
Sbjct: 263 GTAIGFGADVRG-------PDERKTGDLLQELETEDLLKFGLIPEFIGRLPIIATLKDLD 315
Query: 376 EDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLEN 435
E L+++L EPKNAL +QYK++F+M V+L+FTD AL+ IA+KA+ + TGARGLR++LE+
Sbjct: 316 EGALIEILTEPKNALVKQYKRLFNMEGVELNFTDGALKAIAQKAIDRKTGARGLRSILES 375
Query: 436 ILTEAMFEIP 445
L MFE+P
Sbjct: 376 TLLNTMFELP 385
>gi|254492062|ref|ZP_05105238.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylophaga
thiooxidans DMS010]
gi|224462726|gb|EEF78999.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylophaga
thiooxydans DMS010]
Length = 423
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 194/405 (47%), Positives = 264/405 (65%), Gaps = 56/405 (13%)
Query: 67 EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSS 126
E + LPTP+EI + LD +VIGQE+AK+ Y+ AVYNHYKR+
Sbjct: 58 EADSKLPTPREINEALDNYVIGQEKAKR------------YL---SVAVYNHYKRL---- 98
Query: 127 LQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARI 186
+SG+ D+ VEL KSN+LL+GPTGSGKTLLA+TLAR
Sbjct: 99 --------------------RSGH----KDDGVELSKSNILLIGPTGSGKTLLAETLARQ 134
Query: 187 VNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAES 245
+NVPFT+ DAT LT+AGYVGED E+++ KLL D+DV+ A+ GIVYIDE+DKI K+++
Sbjct: 135 LNVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAETGIVYIDEIDKISRKSDN 194
Query: 246 RNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVG 305
+ RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT ILFICGGAF G
Sbjct: 195 PSITRDVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAG 252
Query: 306 LEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRF 365
L+K I R IGF A V++ L + S L +V+ DL+ YGLIPEF+GR
Sbjct: 253 LDKVIRNRTHKGGIGFSADVKS------LDEQRPLSESLRTVEPEDLIQYGLIPEFVGRL 306
Query: 366 PILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTG 425
P++ +L L+E LVQ+L EPKNAL +QY+++F M L F DDAL IA+KAM + TG
Sbjct: 307 PVVATLDELDEAALVQILTEPKNALTKQYQRLFDMEGADLEFRDDALSAIARKAMERKTG 366
Query: 426 ARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
ARGLR+++EN+L + MF++P +++ V++D+ +G + P
Sbjct: 367 ARGLRSIIENVLLDTMFDLP----SLDNISKVVIDESVIGGENTP 407
>gi|262394814|ref|YP_003286668.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio sp.
Ex25]
gi|451970182|ref|ZP_21923409.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
alginolyticus E0666]
gi|262338408|gb|ACY52203.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio sp.
Ex25]
gi|451933696|gb|EMD81363.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
alginolyticus E0666]
Length = 426
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 259/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTPK+I + LD++VIGQ+ AKK AVYNHYKR+
Sbjct: 65 LPTPKQIREHLDDYVIGQDYAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 ---------------RNGDTTSEG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR+ ++ L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVATGTGIGFGAEVRSK------NESKTVGELFTQVEPEDLVKYGLIPEFIGRLPVTT 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY +F + N +L F +DALR IAKKAM + TGARGL
Sbjct: 315 TLTELDEEALIQILCEPKNALTKQYAALFELENAELEFREDALRAIAKKAMERKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P + V+ V++D+ + P
Sbjct: 375 RSILEGVLLETMYELP----SATDVSKVVIDESVINGESEP 411
>gi|337755600|ref|YP_004648111.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
sp. TX077308]
gi|336447205|gb|AEI36511.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
sp. TX077308]
Length = 417
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 195/400 (48%), Positives = 256/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI K LD+++IGQ AKK AVYNHYKRI + +
Sbjct: 56 LPKPIEIKKYLDDYIIGQNNAKKV---------------LSVAVYNHYKRITSETAK--- 97
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
D+ +EL+KSNVLL+GPTGSGKTL A+TLA+++NVPF
Sbjct: 98 ------------------------DDDIELKKSNVLLLGPTGSGKTLFAQTLAKLLNVPF 133
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVG+D E+++ +LL ADFD+ AQ+GI+YIDE+DKI K+ES + R
Sbjct: 134 AIADATTLTEAGYVGDDVENIIVRLLQNADFDIAKAQKGIIYIDEIDKIARKSESASITR 193
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP + I +DT DILFICGGAF G+EK +
Sbjct: 194 DVSGEGVQQALLKLIEGTVSSVP-PKGG-RKHPNQEMIQVDTSDILFICGGAFAGIEKVV 251
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R SIGF A V ++L T L++ V+S DL +GLIPE IGR PI+
Sbjct: 252 KHRMDKVSIGFNADVVQQ------KNSLDTEKLMQKVESEDLTRFGLIPELIGRLPIVTV 305
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L E+ LV++LMEPKNAL +QY K+F ++V + F+D+AL IAKKA+AK TGARGLR
Sbjct: 306 LNELKEEDLVKILMEPKNALIKQYVKLFEFDDVMIEFSDEALVEIAKKAIAKKTGARGLR 365
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+LENIL + MF +P + V V+++ + + + P
Sbjct: 366 TILENILLDVMFHVP----SSEDVEKVIINDKVILEQEEP 401
>gi|423715371|ref|ZP_17689595.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
elizabethae F9251]
gi|395430207|gb|EJF96258.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
elizabethae F9251]
Length = 424
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 190/375 (50%), Positives = 252/375 (67%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI LD++VIGQ+ AK+ AV+NHYKR+ H S + +
Sbjct: 65 VPTPQEIISVLDDYVIGQQHAKRV---------------LSVAVHNHYKRLAHQSKRSD- 108
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+EL KSN+LL+GPTG GKT LA+TLARI++VPF
Sbjct: 109 ---------------------------IELAKSNILLVGPTGCGKTYLAQTLARIIDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI KA++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKADNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT +ILFICGGAF GLE+ I
Sbjct: 202 DVSGEGVQQALLKIMEGTIASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERII 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGF A V+A D + ++ DL+ +GLIPEFIGR PI+ +
Sbjct: 260 SGRGEKTSIGFSATVKA-------PDERCVGEIFRDLEPEDLIKFGLIPEFIGRLPIVAT 312
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ + LVQ+L +PKNAL +QY+++F M NV+L F +DALR IAKKA+ + TGARGLR
Sbjct: 313 LEDLDINALVQILSQPKNALVKQYQRLFEMENVELAFHEDALRAIAKKAIERKTGARGLR 372
Query: 431 ALLENILTEAMFEIP 445
+++E IL E MFE+P
Sbjct: 373 SIMEKILLETMFELP 387
>gi|409394840|ref|ZP_11245987.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
Chol1]
gi|409120489|gb|EKM96833.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
Chol1]
Length = 426
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 199/400 (49%), Positives = 257/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQERAKK IL AVYNHYKR+ ++E
Sbjct: 65 LPAPKEISGILDQYVIGQERAKK-----IL----------AVAVYNHYKRLNQRDKKEE- 108
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 109 ---------------------------VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFAGLEKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + +A L SV+ DLV +GLIPEF+GR P++ +
Sbjct: 260 QARSTRGGIGFSAEVRSKDPGKKIGEA------LRSVEPDDLVKFGLIPEFVGRLPVIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F + V L F DAL+ IA +A+ + TGARGLR
Sbjct: 314 LDELDEPALIQILTEPKNALTKQYAKLFELEGVDLEFRPDALKAIASRALERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP K V+ V++D+ + P
Sbjct: 374 SILEGVLLDTMYEIPSQK----DVSKVVIDESVIEGASKP 409
>gi|404399558|ref|ZP_10991142.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
fuscovaginae UPB0736]
Length = 427
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 200/400 (50%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+ Q++
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLN----QRDK 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
SD VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 106 KSDD-----------------------VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTKGGIGFTAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +AK+A+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRADALKSVAKRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE IL + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGILLDTMYEIP----SQSDVSKVVIDESVIEGKSQP 410
>gi|384083496|ref|ZP_09994671.1| ATP-dependent protease ATP-binding subunit ClpX [gamma
proteobacterium HIMB30]
Length = 430
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 198/416 (47%), Positives = 263/416 (63%), Gaps = 58/416 (13%)
Query: 56 ETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAV 115
E + + S+G LP P+ I LD++VIGQ+RAK+ AV
Sbjct: 54 EVQESDDTETSDG---LPVPQVIKTTLDDYVIGQDRAKRV---------------LAVAV 95
Query: 116 YNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSG 175
YNHYKR+ H + VEL KSN+LL+GPTGSG
Sbjct: 96 YNHYKRLRHGE---------------------------RGERDVELGKSNILLIGPTGSG 128
Query: 176 KTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYID 235
KTLLA+TLAR++NVPFT+ DAT LT+AGYVGED E+++ KLL D+DVE AQ+GIVYID
Sbjct: 129 KTLLAETLARLLNVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQQGIVYID 188
Query: 236 EVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKD 294
E+DKI K+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +
Sbjct: 189 EIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSN 246
Query: 295 ILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVA 354
ILFICGGAF GL+K I +R + IGFGA VR+ + + +A V+ DLV
Sbjct: 247 ILFICGGAFAGLDKVIRDRSEKGGIGFGAEVRSKDESKSVGEAFA------EVEPEDLVK 300
Query: 355 YGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRL 414
YGLIPEF+GR P++ +L L+ED L+Q+L EPKNAL +QYK++F M V+L DALR
Sbjct: 301 YGLIPEFVGRLPVVATLGELDEDALIQILSEPKNALVKQYKELFEMEGVELDVRADALRA 360
Query: 415 IAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+A+KAM + TGARGLR++LE IL MFEIP + V+ +++D+ V P
Sbjct: 361 VARKAMERKTGARGLRSILETILLHPMFEIP----SDNDVSKIVIDEGVVTGDSEP 412
>gi|419955541|ref|ZP_14471668.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri TS44]
gi|387967711|gb|EIK52009.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri TS44]
Length = 426
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 199/400 (49%), Positives = 257/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQERAKK IL AVYNHYKR+ ++E
Sbjct: 65 LPAPKEISGILDQYVIGQERAKK-----IL----------AVAVYNHYKRLNQRDKKEE- 108
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 109 ---------------------------VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFAGLEKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + +A L SV+ DLV +GLIPEF+GR P++ +
Sbjct: 260 QARSTRGGIGFSAEVRSKDPGKKIGEA------LRSVEPDDLVRFGLIPEFVGRLPVIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F + V L F DAL+ IA +A+ + TGARGLR
Sbjct: 314 LDELDEPALIQILTEPKNALTKQYAKLFELEGVDLEFRPDALKAIASRALERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP K V+ V++D+ + P
Sbjct: 374 SILEGVLLDTMYEIPSQK----EVSKVVIDESVIEGASKP 409
>gi|395495007|ref|ZP_10426586.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
PAMC 25886]
gi|395794595|ref|ZP_10473916.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
Ag1]
gi|421137892|ref|ZP_15597968.1| ATP-dependent protease ATP-binding subunit [Pseudomonas fluorescens
BBc6R8]
gi|395341260|gb|EJF73080.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
Ag1]
gi|404510951|gb|EKA24845.1| ATP-dependent protease ATP-binding subunit [Pseudomonas fluorescens
BBc6R8]
Length = 427
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 199/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+ Q++
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLN----QRDK 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
SD VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 106 KSDD-----------------------VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTRGGIGFSAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +AK+A+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRADALKSVAKRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSEVSKVVIDESVIEGKSKP 410
>gi|220934116|ref|YP_002513015.1| ATP-dependent protease ATP-binding subunit ClpX [Thioalkalivibrio
sulfidophilus HL-EbGr7]
gi|254763871|sp|B8GNT9.1|CLPX_THISH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|219995426|gb|ACL72028.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 425
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 196/390 (50%), Positives = 255/390 (65%), Gaps = 56/390 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI K LDE+VIGQ+RAKK IL AVYNHYKR+ + + E
Sbjct: 65 LPKPHEIKKILDEYVIGQDRAKK-----IL----------AVAVYNHYKRLEARNSKDE- 108
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 109 ---------------------------VELAKSNILLIGPTGSGKTLLAETLARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI KA++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQTGIVYIDEIDKISRKADNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT +ILFI GGAF GL+K I
Sbjct: 202 DVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTHNILFIVGGAFAGLDKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + IGF A V++ G + S L V+ DL+ YGLIPEF+GR P++ +
Sbjct: 260 RDRTEKGGIGFSAKVKSKEEKGPV------SRTLSGVEPEDLIKYGLIPEFVGRLPVVAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EPKNAL +QY K+F M V + F +DALR +A KAM + TGARGLR
Sbjct: 314 LEELDEDALIQILTEPKNALTKQYGKLFEMEGVDIEFREDALRAVAAKAMERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVD 460
+LE +L + M+++P T +V+ V++D
Sbjct: 374 TILEQVLLDTMYDLP----STENVSKVVID 399
>gi|359785394|ref|ZP_09288546.1| ATP-dependent protease ATP-binding subunit ClpX [Halomonas sp.
GFAJ-1]
gi|359297323|gb|EHK61559.1| ATP-dependent protease ATP-binding subunit ClpX [Halomonas sp.
GFAJ-1]
Length = 425
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 265/400 (66%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP+EI LD++VIGQ+RAK M++ V AVYNHYKR
Sbjct: 65 LPTPREIRHTLDDYVIGQDRAK----------MVLSV-----AVYNHYKR---------- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
L + V+ G+ VEL KSN+LL+GPTGSGKTLLA+T+AR++NVPF
Sbjct: 100 ----------LKADVRDGD--------VELGKSNILLIGPTGSGKTLLAETMARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE A+RGIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAERGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT +VP P G RKHP+ + + ++T +ILFI GGAF GL+K I
Sbjct: 202 DVSGEGVQQALLKLIEGTTASVP-PQGG-RKHPQQEFVQVNTGNILFIVGGAFAGLDKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + IGF A V++ + G+ LL V+ DLV +GLIPEF+GR P++ +
Sbjct: 260 RDRAEKGGIGFNASVKSKESSRGV------GELLADVEPEDLVKFGLIPEFVGRLPVIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L ED LVQ+L EPKN+L +QY K+F M +V L F DDALR +A KAM + TGARGLR
Sbjct: 314 LTELTEDALVQILTEPKNSLVKQYAKLFEMEDVTLEFRDDALRSVAAKAMERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE++L + M+EIP + V+ V++D+ + P
Sbjct: 374 SILESVLLDTMYEIPSLE----GVSKVVIDESVIAGESEP 409
>gi|398871357|ref|ZP_10626672.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM74]
gi|398206298|gb|EJM93065.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM74]
Length = 427
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ +ND+ VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKNDD-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTKGGIGFNAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +AK+A+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRTDALKSVAKRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSEVSKVVIDESVIEGKSKP 410
>gi|330808573|ref|YP_004353035.1| ATP-dependent protease ATP-binding subunit [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327376681|gb|AEA68031.1| ATP-dependent protease ATP-binding subunit [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 427
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ +ND+ VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKNDD-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTRGGIGFNAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +AK+A+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRSDALKSVAKRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSEVSKVVIDESVIEGKSKP 410
>gi|91228616|ref|ZP_01262534.1| ATP-dependent protease ATP-binding subunit [Vibrio alginolyticus
12G01]
gi|269965579|ref|ZP_06179693.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio
alginolyticus 40B]
gi|91187848|gb|EAS74162.1| ATP-dependent protease ATP-binding subunit [Vibrio alginolyticus
12G01]
gi|269829804|gb|EEZ84039.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio
alginolyticus 40B]
Length = 426
Score = 357 bits (917), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 259/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTPK+I + LD++VIGQ+ AKK AVYNHYKR+
Sbjct: 65 LPTPKQIREHLDDYVIGQDYAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 ---------------RNGDTTSEG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR+ ++ L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVATGTGIGFGAEVRSK------NESKTVGELFTQVEPEDLVKYGLIPEFIGRLPVTT 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY +F + N +L F +DALR IAKKAM + TGARGL
Sbjct: 315 TLTELDEEALIQILCEPKNALTKQYAALFELENAELEFREDALRAIAKKAMERKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P + V+ V++D+ + P
Sbjct: 375 RSILEGVLLETMYELP----SATDVSKVVIDESVINGESEP 411
>gi|397664326|ref|YP_006505864.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Legionella pneumophila subsp. pneumophila]
gi|395127737|emb|CCD05936.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Legionella pneumophila subsp. pneumophila]
Length = 391
Score = 357 bits (917), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 193/400 (48%), Positives = 258/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTPKEI LDE+VIGQ+ AKK AVYNHYKR+ H S
Sbjct: 30 LPTPKEISNFLDEYVIGQQHAKKV---------------LSVAVYNHYKRLQHKS----- 69
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++ VEL KSN+LL+GPTGSGKTLLA+TLARI+NVPF
Sbjct: 70 ------------------------EDGVELGKSNILLIGPTGSGKTLLAQTLARILNVPF 105
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL D+DV+ AQ+GIVYIDE+DKI K+++ + R
Sbjct: 106 AMADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAQQGIVYIDEIDKISRKSDNPSITR 165
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 166 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSNILFICGGAFAGLDKVI 223
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
ER SSIGF A +++ + S +L ++S DL+ YGLIPEF+GR P++ +
Sbjct: 224 RERSDKSSIGFSAQLKSKKSSND-----EVSKVLGQLESDDLIKYGLIPEFVGRLPVVTT 278
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+ +L PKNAL +Q++ +F M +L F D+AL IAKKA+ + GARGLR
Sbjct: 279 LQELDEAALIDILTRPKNALTKQFQSLFKMEGSELEFRDEALIAIAKKALERKMGARGLR 338
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LENIL + M+++P + VN V++D+ V + P
Sbjct: 339 SILENILLDTMYDLPSLE----GVNKVVIDESVVNGLSKP 374
>gi|395764672|ref|ZP_10445296.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella sp.
DB5-6]
gi|395414209|gb|EJF80658.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella sp.
DB5-6]
Length = 424
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 197/411 (47%), Positives = 267/411 (64%), Gaps = 68/411 (16%)
Query: 36 EIMGGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKS 95
E+ IR++ +S+GI++ +PTP+EI LD++VIGQ+ AK+
Sbjct: 44 ELCMDIIREENKSSGIKARD---------------GVPTPQEIITVLDDYVIGQQHAKRV 88
Query: 96 HIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEN 155
AV+NHYKR+ H S KS +
Sbjct: 89 ---------------LSVAVHNHYKRLAHQS--------------------KSSD----- 108
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
+EL KSN+LL+GPTG GKT LA+TLARI++VPFT+ DAT LT+AGYVGED E+++ K
Sbjct: 109 ---IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILK 165
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
LL AAD++VE AQRGIVYIDEVDKI KA++ + RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQAADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVP- 224
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
P G RKHP+ + + +DT +ILFICGGAF GLE+ IS R + +SIGF A V+A
Sbjct: 225 PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA------- 276
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
D + ++ DL+ +GLIPEFIGR PI+ +L L+ + LV++L +PKNAL +QY
Sbjct: 277 PDERCVGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALVKILSQPKNALVKQY 336
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP 445
+++F M NV+L F +DALR+IAKKA+ + TGARGLR+++E IL E MFE+P
Sbjct: 337 QRLFEMENVELAFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFELP 387
>gi|357974123|ref|ZP_09138094.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas sp.
KC8]
Length = 422
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 196/394 (49%), Positives = 259/394 (65%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P+P+EICK LD++VIGQ +AK+ AV+NHYKR+ H + E
Sbjct: 64 VPSPQEICKVLDDYVIGQMQAKRV---------------LSVAVHNHYKRLAHGAKGAE- 107
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTG GKTLLA+TLA+ +VPF
Sbjct: 108 ---------------------------VELAKSNILLVGPTGCGKTLLAQTLAKTFDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI KA++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKADNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 201 DVSGEGVQQALLKLMEGTTASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFSGLEKII 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R Q SIGFGA V A D T +L + DL+ +GLIPEF+GR P++ +
Sbjct: 259 GDRLQGKSIGFGAHVAA-------PDERRTGEVLRQCEPEDLLKFGLIPEFVGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E LV++L EPKNAL +QY+K+F M +VKL F DDAL IA+KA+ + TGARGLR
Sbjct: 312 LEDLDEPALVKILSEPKNALVKQYQKLFEMEDVKLGFNDDALSSIARKAIERKTGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
++LE IL + MF++P V+ ++VDK+ V
Sbjct: 372 SILEGILLDTMFDLP----SMDGVDEIMVDKDVV 401
>gi|254780271|ref|YP_003064684.1| ATP-dependent protease ATP-binding subunit ClpX [Candidatus
Liberibacter asiaticus str. psy62]
gi|254039948|gb|ACT56744.1| ATP-dependent protease ATP-binding subunit ClpX [Candidatus
Liberibacter asiaticus str. psy62]
Length = 424
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 200/395 (50%), Positives = 267/395 (67%), Gaps = 54/395 (13%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
N++ ++ + +P P+EI + LDE+VIGQ +AKK AV+NHYK
Sbjct: 54 NKSSITKSHEGIPNPQEILRVLDEYVIGQGQAKKV---------------LAVAVHNHYK 98
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
R+ HSS KS N VEL KSN+LL+GPTG GKT LA
Sbjct: 99 RLAHSS--------------------KSSN--------VELAKSNILLVGPTGCGKTYLA 130
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+TLARI++VPFT+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI
Sbjct: 131 QTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKI 190
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K+++ + RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT +ILFIC
Sbjct: 191 SRKSDNPSITRDVSGEGVQQALLKIMEGTIASVP-PQGG-RKHPQQEFLQVDTTNILFIC 248
Query: 300 GGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIP 359
GGAF GL++ IS R + +SIGF A V+ +D +L +++S DLV +GLIP
Sbjct: 249 GGAFAGLDRIISARGEKASIGFSAVVKD-------SDNRPVGEVLRNLESEDLVKFGLIP 301
Query: 360 EFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKA 419
EFIGR P+L +L L+E+ L+++L EPKNAL +QY+ +F M +V+L F +DALR IA+ A
Sbjct: 302 EFIGRLPVLATLEDLDENSLIRILSEPKNALIKQYQCLFDMEDVELVFHEDALREIARCA 361
Query: 420 MAKNTGARGLRALLENILTEAMFEIPETKIGTSSV 454
+A TGARGLR++LE IL + MFE+P K G SSV
Sbjct: 362 IAHKTGARGLRSILEKILLDTMFELPMLK-GVSSV 395
>gi|428211846|ref|YP_007084990.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Oscillatoria
acuminata PCC 6304]
gi|428000227|gb|AFY81070.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Oscillatoria
acuminata PCC 6304]
Length = 446
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 199/428 (46%), Positives = 264/428 (61%), Gaps = 48/428 (11%)
Query: 45 DGESNGIESESETENGNRNRNSEGNIDL---PTPKEICKGLDEFVIGQERAKKSHIFCIL 101
D + + TE + R NI L P P+EI K LDE VIGQ+ AKK
Sbjct: 49 DSNAAAPQPVPRTEQPQKRRTRAANISLNQMPKPREIKKHLDEHVIGQDEAKKV------ 102
Query: 102 VDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVEL 161
AVYNHYKR+ ++ + SG E+ VEL
Sbjct: 103 ---------LSVAVYNHYKRLSYTQAKA------------------SGKIGAEDP--VEL 133
Query: 162 EKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAAD 221
+KSN+LL+GPTG GKTLLA+TLA ++ VPF + DAT LT+AGYVGED E++L +LL AD
Sbjct: 134 QKSNILLIGPTGCGKTLLAQTLADVLEVPFAVADATTLTEAGYVGEDVENILLRLLQVAD 193
Query: 222 FDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPR 280
DVE AQRGI+YIDE+DKI K+E+ + RDVSGEGVQQALLKMLEGTV NVP P G R
Sbjct: 194 LDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVP-PQGG-R 251
Query: 281 KHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVT 340
KHP D I IDT +ILFICGGAFVGLEK + +R S+GF P A + T
Sbjct: 252 KHPYQDCIQIDTSNILFICGGAFVGLEKVVEQRTGKKSMGFIQPGDAQSKEKR------T 305
Query: 341 SSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSM 400
+ +L+++ DLV +G+IPEFIGR P+L + L+ED L ++L EPKNAL +QY+K+ M
Sbjct: 306 ADILKNLQPDDLVKFGMIPEFIGRIPVLAVVDPLDEDALTEILTEPKNALVKQYQKLLRM 365
Query: 401 NNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETK-IGTSSVNAVLV 459
+NV L F DA+R IA++A + TGAR LR ++E ++ + M+E+P K + ++ +V
Sbjct: 366 DNVNLEFKPDAIRAIAQEAYRRKTGARALRGIVEELMLDVMYELPSRKDVTRCTITREMV 425
Query: 460 DKEAVGSV 467
+K + +
Sbjct: 426 EKRSTAEL 433
>gi|403530412|ref|YP_006664941.1| ATP-dependent protease ATP-binding subunit ClpX [Bartonella
quintana RM-11]
gi|403232484|gb|AFR26227.1| ATP-dependent protease ATP-binding subunit ClpX [Bartonella
quintana RM-11]
Length = 378
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 198/406 (48%), Positives = 266/406 (65%), Gaps = 68/406 (16%)
Query: 41 FIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCI 100
IR++ +S+GI++ +PTP+EI LD++VIGQ+ AK+
Sbjct: 3 IIREENKSSGIKARD---------------GVPTPQEIITVLDDYVIGQQHAKRV----- 42
Query: 101 LVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVE 160
AV+NHYKR+ H S KS ND +E
Sbjct: 43 ----------LSVAVHNHYKRLAHQS--------------------KS------ND--IE 64
Query: 161 LEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAA 220
L KSN+LL+GPTG GKT LA+TLARI++VPFT+ DAT LT+AGYVGED E+++ KLL AA
Sbjct: 65 LAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQAA 124
Query: 221 DFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGP 279
D++VE AQRGIVYIDEVDKI KA++ + RDVSGEGVQQALLK++EGT+ +VP P G
Sbjct: 125 DYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVP-PQGG- 182
Query: 280 RKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALV 339
RKHP+ + + ++T +ILFICGGAF GLE+ IS R + +SIGF A V+A D
Sbjct: 183 RKHPQQEFLQVNTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA-------PDERC 235
Query: 340 TSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFS 399
+ ++ DL+ +GLIPEFIGR PI+ +L L+ + LVQ+L +PKNAL +QY+++F
Sbjct: 236 VGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALVQILSQPKNALVKQYQRLFE 295
Query: 400 MNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP 445
M NV+L F +DALR+IAKKA+ + TGARGLR+++E IL E MFE+P
Sbjct: 296 MENVELAFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFELP 341
>gi|398860149|ref|ZP_10615807.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM79]
gi|398867304|ref|ZP_10622768.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM78]
gi|398879705|ref|ZP_10634793.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM67]
gi|398886633|ref|ZP_10641500.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM60]
gi|398904000|ref|ZP_10652022.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM50]
gi|398938376|ref|ZP_10667779.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM41(2012)]
gi|398996367|ref|ZP_10699224.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM21]
gi|407364029|ref|ZP_11110561.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
mandelii JR-1]
gi|398126898|gb|EJM16319.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM21]
gi|398165924|gb|EJM54034.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM41(2012)]
gi|398176429|gb|EJM64148.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM50]
gi|398188904|gb|EJM76193.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM60]
gi|398195849|gb|EJM82876.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM67]
gi|398235354|gb|EJN21185.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM79]
gi|398237282|gb|EJN23036.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM78]
Length = 427
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ +ND+ VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKNDD-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTKGGIGFNAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +AK+A+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRADALKSVAKRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSEVSKVVIDESVIEGKSKP 410
>gi|407974426|ref|ZP_11155335.1| ATP-dependent protease ATP-binding subunit ClpX [Nitratireductor
indicus C115]
gi|407430115|gb|EKF42790.1| ATP-dependent protease ATP-binding subunit ClpX [Nitratireductor
indicus C115]
Length = 424
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 199/402 (49%), Positives = 264/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI LD++VIGQ AK+ AV+NHYKR+ H+S
Sbjct: 65 VPTPQEIMTVLDDYVIGQSHAKRV---------------LSVAVHNHYKRLAHAS----- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KS + VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 105 ---------------KSAD--------VELAKSNILLIGPTGCGKTLLAQTLARIIDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 202 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTANILFICGGAFAGLDKII 259
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S+R + +SIGFGA V + + RTG L V+ DL+ +GLIPEF+GR P+L
Sbjct: 260 SDRGRKTSIGFGATVASPEDRRTG---------ELFRQVEPEDLLKFGLIPEFVGRLPVL 310
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E LVQ+L EPKNAL +QY+++F M NV+L F ++AL IA+KA+ + TGARG
Sbjct: 311 ATLEDLDEAALVQILSEPKNALVKQYQRLFEMENVELTFHENALAAIARKAIERKTGARG 370
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E IL + MFE+P V V++ E V P
Sbjct: 371 LRSIMEAILLDTMFELP----ALEGVQEVVISDEVVAGNARP 408
>gi|395649557|ref|ZP_10437407.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 427
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 257/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ + DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKGDE-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTRGGIGFSAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +AK+A+ + TGARGLR
Sbjct: 315 LDELDEAALIQILTEPKNALTKQYAKLFEMEGVDLEFRTDALKSVAKRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSEVSKVVIDESVIEGKSKP 410
>gi|424826850|ref|ZP_18251701.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
sporogenes PA 3679]
gi|365980551|gb|EHN16577.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
sporogenes PA 3679]
Length = 429
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 195/396 (49%), Positives = 265/396 (66%), Gaps = 57/396 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQE AKKS AVYNHYKRI
Sbjct: 60 LPKPTEIKTYLDQYVIGQEDAKKS---------------LSVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N N ND+ VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF
Sbjct: 96 ------------------NSNTNNDD-VELQKSNILLLGPTGSGKTLLAQTLAKFLNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ AD+D+E A++GIVYIDE+DKI K+E+ + R
Sbjct: 137 AIADATTLTEAGYVGEDVENILLKLIQNADYDIERAEKGIVYIDEIDKIARKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV VP P G RKHP + I I+T +ILFICGGAF G++K I
Sbjct: 197 DVSGEGVQQALLKILEGTVAAVP-PQGG-RKHPHQEFIQINTTNILFICGGAFDGVDKII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R + SS+GFGA +++ LL+ + GDL+ +GLIPEFIGR PI+V+
Sbjct: 255 ERRTRTSSLGFGAEIQSKKEKD-------LGKLLKDIMPGDLLKFGLIPEFIGRLPIVVT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ + L+++L EPKNAL +QYKK+F +++V+L F+ +AL+ IA +A+ +NTGARGLR
Sbjct: 308 LDKLDREALIKILTEPKNALVKQYKKLFELDDVELEFSQEALKGIADEAINRNTGARGLR 367
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
A++E+++ E MF+IP +++ V+V+++ + +
Sbjct: 368 AIIEDMMREIMFDIP----SQENISKVIVNEDCIKT 399
>gi|77459918|ref|YP_349425.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
fluorescens Pf0-1]
gi|398974166|ref|ZP_10684903.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM25]
gi|123730994|sp|Q3K9X0.1|CLPX_PSEPF RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|77383921|gb|ABA75434.1| ATP-dependent specificity component of clpP serine protease,
chaperone [Pseudomonas fluorescens Pf0-1]
gi|398142050|gb|EJM30955.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM25]
Length = 427
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+ Q++
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLN----QRDK 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+D VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 106 KADD-----------------------VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTKGGIGFNAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +AK+A+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRSDALKSVAKRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSEVSKVVIDESVIEGKSKP 410
>gi|49474140|ref|YP_032182.1| ATP-dependent protease ATP-binding subunit ClpX [Bartonella
quintana str. Toulouse]
gi|61211489|sp|Q6G177.1|CLPX_BARQU RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|49239644|emb|CAF26004.1| ATP-dependent clp protease ATP-binding subunit clpX [Bartonella
quintana str. Toulouse]
Length = 424
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 199/411 (48%), Positives = 268/411 (65%), Gaps = 68/411 (16%)
Query: 36 EIMGGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKS 95
E+ IR++ +S+GI++ +PTP+EI LD++VIGQ+ AK+
Sbjct: 44 ELCMDIIREENKSSGIKARD---------------GVPTPQEIITVLDDYVIGQQHAKRV 88
Query: 96 HIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEN 155
AV+NHYKR+ H S KS N
Sbjct: 89 ---------------LSVAVHNHYKRLAHQS--------------------KS------N 107
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
D +EL KSN+LL+GPTG GKT LA+TLARI++VPFT+ DAT LT+AGYVGED E+++ K
Sbjct: 108 D--IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILK 165
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
LL AAD++VE AQRGIVYIDEVDKI KA++ + RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQAADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVP- 224
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
P G RKHP+ + + ++T +ILFICGGAF GLE+ IS R + +SIGF A V+A
Sbjct: 225 PQGG-RKHPQQEFLQVNTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA------- 276
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
D + ++ DL+ +GLIPEFIGR PI+ +L L+ + LVQ+L +PKNAL +QY
Sbjct: 277 PDERCVGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALVQILSQPKNALVKQY 336
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP 445
+++F M NV+L F +DALR+IAKKA+ + TGARGLR+++E IL E MFE+P
Sbjct: 337 QRLFEMENVELAFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFELP 387
>gi|398840798|ref|ZP_10598030.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM102]
gi|398109810|gb|EJL99726.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM102]
Length = 427
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ +ND+ VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKNDD-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTKGGIGFNAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +AK+A+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRADALKSVAKRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSEVSKVVIDESVIEGKSKP 410
>gi|315122829|ref|YP_004063318.1| ATP-dependent protease ATP-binding subunit ClpX [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313496231|gb|ADR52830.1| ATP-dependent protease ATP-binding subunit ClpX [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 424
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 195/405 (48%), Positives = 269/405 (66%), Gaps = 57/405 (14%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
N++ S+ + +PTP++I + LDE+VIGQ +AKK AV+NHYK
Sbjct: 54 NKSSISKSHEGVPTPQDILQVLDEYVIGQGQAKKV---------------LAVAVHNHYK 98
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
R+ HSS + VEL KSN+LL+GPTG GKT LA
Sbjct: 99 RLAHSS----------------------------KNSSVELAKSNILLVGPTGCGKTYLA 130
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+TLARI++VPFT+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI
Sbjct: 131 QTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKI 190
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K+++ + RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT +ILFIC
Sbjct: 191 SRKSDNPSITRDVSGEGVQQALLKIMEGTIASVP-PQGG-RKHPQQEFLQVDTTNILFIC 248
Query: 300 GGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIP 359
GGAF GL++ IS R + +SIGF A V+ +D +L +++S DLV +GLIP
Sbjct: 249 GGAFAGLDRIISARGEKASIGFSAVVKN-------SDDRPVGEVLRNIESEDLVKFGLIP 301
Query: 360 EFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKA 419
EFIGR P+L +L L+ED L+++L EPKNAL +QY+ +F M +++L F +DALR IA++A
Sbjct: 302 EFIGRLPVLATLEDLDEDSLIRILSEPKNALVKQYQCLFEMEDIELVFHEDALREIARRA 361
Query: 420 MAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+ TGARGLR+++E IL + MFE+P K VN +++ + V
Sbjct: 362 IIHKTGARGLRSIMEKILLDTMFELPVLK----GVNGIIISDDVV 402
>gi|170761592|ref|YP_001788550.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum A3 str. Loch Maree]
gi|238688794|sp|B1L1D6.1|CLPX_CLOBM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|169408581|gb|ACA56992.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum A3 str. Loch Maree]
Length = 429
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 199/402 (49%), Positives = 264/402 (65%), Gaps = 54/402 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQE AKKS AVYNHYKRI
Sbjct: 60 LPKPTEIKTYLDQYVIGQEDAKKS---------------LSVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N N ND+ VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF
Sbjct: 96 ------------------NSNTNNDD-VELQKSNILLLGPTGSGKTLLAQTLAKFLNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ AD+D+E A++GIVYIDE+DKI K+E+ + R
Sbjct: 137 AIADATTLTEAGYVGEDVENILLKLIQNADYDIEKAEKGIVYIDEIDKIARKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV VP P G RKHP + I I+T +ILFICGGAF G++K I
Sbjct: 197 DVSGEGVQQALLKILEGTVAAVP-PQGG-RKHPHQEFIQINTTNILFICGGAFDGVDKII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R + SS+GFGA +++ LL+ + GDL+ +GLIPEFIGR PI+V+
Sbjct: 255 ERRTRTSSLGFGAEIQSKKEKD-------LGKLLKDIMPGDLLKFGLIPEFIGRLPIVVT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ + L+++L EPKNAL +QYKK+F +++V+L F +AL+ IA +A+ +NTGARGLR
Sbjct: 308 LDKLDREALIKILTEPKNALVKQYKKLFELDDVELEFNQEALKGIADEAINRNTGARGLR 367
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEAVGSVDAPG 471
A++E+++ E MF+IP + IG VN + + ++A G
Sbjct: 368 AIIEDMMREIMFDIPSQENIGKVIVNEDCIKTKKPELIEAEG 409
>gi|146277489|ref|YP_001167648.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodobacter
sphaeroides ATCC 17025]
gi|166215195|sp|A4WSH9.1|CLPX_RHOS5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|145555730|gb|ABP70343.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodobacter
sphaeroides ATCC 17025]
Length = 421
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 191/375 (50%), Positives = 256/375 (68%), Gaps = 54/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EICK LD++VIGQ AK+ AV+NHYKR+ HSS
Sbjct: 63 VPTPREICKVLDDYVIGQMHAKRV---------------LSVAVHNHYKRLNHSS----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ND +EL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ----------------------KND--IELSKSNILLIGPTGCGKTLLAQTLARILDVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 139 TMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 199 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
++R + S IGFGA V+ D+ L ++ DL+ +GLIPEF+GR P++ +
Sbjct: 257 AQRGKGSGIGFGAEVKD-------PDSRGVGELFTELEPEDLLKFGLIPEFVGRLPVIAT 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L+E LV +L EPKNAL +QY+++F + VKL FT DAL IAK+A+ + TGARGLR
Sbjct: 310 LTDLDEAALVTILTEPKNALVKQYQRLFEIEGVKLTFTADALTAIAKRAIKRKTGARGLR 369
Query: 431 ALLENILTEAMFEIP 445
+++E+IL + MFE+P
Sbjct: 370 SIMEDILLDTMFELP 384
>gi|304311291|ref|YP_003810889.1| ATP-dependent Clp protease ATP-binding subunit [gamma
proteobacterium HdN1]
gi|301797024|emb|CBL45237.1| ATP-dependent Clp protease ATP-binding subunit [gamma
proteobacterium HdN1]
Length = 434
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 204/421 (48%), Positives = 268/421 (63%), Gaps = 54/421 (12%)
Query: 51 IESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIG 110
I E + EN + + LP+PKEI LD++VIGQ+RAKK IL
Sbjct: 51 IREEVQEENADNKSDR-----LPSPKEIKTILDDYVIGQDRAKK-----IL--------- 91
Query: 111 ACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMG 170
AVYNHYKRI + KS E D +EL KSN+LL+G
Sbjct: 92 -AVAVYNHYKRIRSGN-------------------AKSAKGRGEGD--IELSKSNILLIG 129
Query: 171 PTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRG 230
PTGSGKTLLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ G
Sbjct: 130 PTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQVG 189
Query: 231 IVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIP 289
IVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + +
Sbjct: 190 IVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQ 247
Query: 290 IDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDS 349
+DT +ILFICGGAF GLEK I R S IGF A V++ D + L+ V+
Sbjct: 248 VDTTNILFICGGAFAGLEKVIQNRSTKSGIGFVASVKSK------EDNINVGDTLKEVEP 301
Query: 350 GDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTD 409
DLV +GLIPEF+GR PI+ +L L+E LV++L EP+N+L +QY+K+F M +++L F
Sbjct: 302 EDLVKFGLIPEFVGRLPIIATLEELDEAALVRILTEPRNSLTKQYQKLFEMEDIELDFRT 361
Query: 410 DALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDA 469
DAL +AKKA+ + TGARGLR++LEN+L + M++ P + V V+VD+ +
Sbjct: 362 DALHAVAKKALERKTGARGLRSILENVLLDTMYDAPSLE----GVTKVVVDEAVIKGDSE 417
Query: 470 P 470
P
Sbjct: 418 P 418
>gi|307610563|emb|CBX00151.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
pneumophila 130b]
Length = 424
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 193/400 (48%), Positives = 258/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTPKEI LDE+VIGQ+ AKK AVYNHYKR+ H S
Sbjct: 63 LPTPKEISNFLDEYVIGQQHAKKV---------------LSVAVYNHYKRLQHKS----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++ VEL KSN+LL+GPTGSGKTLLA+TLARI+NVPF
Sbjct: 103 ------------------------EDGVELGKSNILLIGPTGSGKTLLAQTLARILNVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL D+DV+ AQ+GIVYIDE+DKI K+++ + R
Sbjct: 139 AMADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAQQGIVYIDEIDKISRKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 199 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSNILFICGGAFAGLDKVI 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
ER SSIGF A +++ + S +L ++S DL+ YGLIPEF+GR P++ +
Sbjct: 257 RERSDKSSIGFSAQLKSKKSSND-----EVSKVLGQLESDDLIKYGLIPEFVGRLPVVTT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+ +L PKNAL +Q++ +F M +L F D+AL IAKKA+ + GARGLR
Sbjct: 312 LQELDEAALIDILTRPKNALTKQFQSLFKMEGSELEFRDEALIAIAKKALERKMGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LENIL + M+++P + VN V++D+ V + P
Sbjct: 372 SILENILLDTMYDLPSLE----GVNKVVIDESVVNGLSKP 407
>gi|109899440|ref|YP_662695.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudoalteromonas
atlantica T6c]
gi|123170858|sp|Q15R47.1|CLPX_PSEA6 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|109701721|gb|ABG41641.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas atlantica T6c]
Length = 425
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 196/402 (48%), Positives = 266/402 (66%), Gaps = 57/402 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTPKEI LD++VIGQE AKK AVYNHYKR+
Sbjct: 64 ELPTPKEIHSHLDDYVIGQEHAKKV---------------LSVAVYNHYKRL-------- 100
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
++G+ + + VEL KSN+LLMGPTGSGKTLLA+TLAR+++VP
Sbjct: 101 ----------------RNGDVH----DGVELGKSNILLMGPTGSGKTLLAETLARLLDVP 140
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
FT+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ +
Sbjct: 141 FTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSIT 200
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT ILFICGGAF GL+K
Sbjct: 201 RDVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKV 258
Query: 310 ISERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I +R + IGFG ++ + ++ LL+ V+ DLV YGLIPEFIGR P+L
Sbjct: 259 IEQRAHTGTGIGFGTAIKDS------SNKSKEGELLKKVEPEDLVKYGLIPEFIGRLPVL 312
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
SL L+E+ L+Q+L EPKN+L +QY +FS+ + +L F +DAL+ IAKKAM++ TGARG
Sbjct: 313 TSLEELSEEALIQILREPKNSLTKQYAALFSLEDTELEFREDALQAIAKKAMSRKTGARG 372
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E +L + M+E+P S+V+ V+VD+ + P
Sbjct: 373 LRSIVEAVLLDTMYELP----SMSNVSKVVVDETVIRGESKP 410
>gi|269102130|ref|ZP_06154827.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268162028|gb|EEZ40524.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 392
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 198/402 (49%), Positives = 263/402 (65%), Gaps = 56/402 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTP+EI LD++VIGQE AKK AVYNHYKR+
Sbjct: 30 ELPTPQEIRHNLDDYVIGQEHAKKV---------------LAVAVYNHYKRL-------- 66
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
++G+ N + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VP
Sbjct: 67 ----------------RNGDTNSDG---VELGKSNILLIGPTGSGKTLLAETLARMLDVP 107
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
FT+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI K+++ +
Sbjct: 108 FTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKSDNPSIT 167
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K
Sbjct: 168 RDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKV 225
Query: 310 ISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I +R ++ IGFGA VR+ + LTD L V+ DLV +GLIPEFIGR P+
Sbjct: 226 IEQRVATNTGIGFGAEVRSKDESRTLTD------LFLQVEPEDLVKFGLIPEFIGRLPVT 279
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L+ L+ED LVQ+L EPKNAL +QY +F + +L F DDAL IA+KAM + TGARG
Sbjct: 280 ATLTELDEDALVQILREPKNALTKQYGALFELEGAELEFRDDALVAIARKAMERKTGARG 339
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E +L + M+E+P TK V+ V++D+ + P
Sbjct: 340 LRSIVEAVLLDTMYELPSTK----GVSKVVIDESVIKGESEP 377
>gi|302187982|ref|ZP_07264655.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. syringae 642]
Length = 427
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ +ND+ VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKNDD-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTRGGIGFNAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +A++A+ + TGARGLR
Sbjct: 315 LDELDEAALIQILTEPKNALTKQYAKLFEMEGVDLEFRTDALKSVARRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSDVSKVVIDESVIDGSPKP 410
>gi|46577697|sp|P70730.2|CLPX_AZOBR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|5002358|gb|AAD37436.1|AF150957_3 heat-shock protein ClpX [Azospirillum brasilense]
Length = 422
Score = 357 bits (916), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 198/394 (50%), Positives = 264/394 (67%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I LD++VIGQ AK+ AV+NHYKR+ H
Sbjct: 63 VPTPRDIHAVLDDYVIGQHHAKRV---------------LSVAVHNHYKRLAH------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G K ND VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 101 -------------GTK------HND--VELAKSNILLVGPTGCGKTLLAQTLARIIDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYV ED E+++ KLL AA AAQRGIVYIDEVDKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVREDVENIILKLLQAARLQRRAAQRGIVYIDEVDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTSNILFICGGAFAGLDKII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
++R + +SIGFGA VR D T +L V+ DL+ +GLIPEFIGR P++ +
Sbjct: 258 AQRGKGTSIGFGADVRG-------PDERSTGDILREVEPEDLLKFGLIPEFIGRLPVVAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
LS L+E LV++L +PKNAL +QY+++F M +V+L F+DDALR I+ KA+ + TGARGLR
Sbjct: 311 LSDLDETALVEILTKPKNALVKQYQRLFEMEDVRLEFSDDALRTISHKAIQRKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E+IL + MF++P G S V ++LV+KE V
Sbjct: 371 SIMESILLDPMFDLP----GLSGVESILVNKEVV 400
>gi|54294747|ref|YP_127162.1| ATP-dependent protease ATP-binding subunit ClpX [Legionella
pneumophila str. Lens]
gi|148359405|ref|YP_001250612.1| ATP-dependent Clp protease ATP binding subunit ClpX [Legionella
pneumophila str. Corby]
gi|296107451|ref|YP_003619151.1| 3'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
[Legionella pneumophila 2300/99 Alcoy]
gi|397667588|ref|YP_006509125.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Legionella pneumophila subsp. pneumophila]
gi|61211413|sp|Q5WVJ1.1|CLPX_LEGPL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214781|sp|A5ID16.1|CLPX_LEGPC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|53754579|emb|CAH16063.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
pneumophila str. Lens]
gi|148281178|gb|ABQ55266.1| ATP-dependent Clp protease, ATP binding subunit ClpX [Legionella
pneumophila str. Corby]
gi|295649352|gb|ADG25199.1| 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
[Legionella pneumophila 2300/99 Alcoy]
gi|395130999|emb|CCD09248.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Legionella pneumophila subsp. pneumophila]
Length = 424
Score = 357 bits (916), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 193/400 (48%), Positives = 258/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTPKEI LDE+VIGQ+ AKK AVYNHYKR+ H S
Sbjct: 63 LPTPKEISNFLDEYVIGQQHAKKV---------------LSVAVYNHYKRLQHKS----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++ VEL KSN+LL+GPTGSGKTLLA+TLARI+NVPF
Sbjct: 103 ------------------------EDGVELGKSNILLIGPTGSGKTLLAQTLARILNVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL D+DV+ AQ+GIVYIDE+DKI K+++ + R
Sbjct: 139 AMADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAQQGIVYIDEIDKISRKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 199 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSNILFICGGAFAGLDKVI 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
ER SSIGF A +++ + S +L ++S DL+ YGLIPEF+GR P++ +
Sbjct: 257 RERSDKSSIGFSAQLKSKKSSND-----EVSKVLGQLESDDLIKYGLIPEFVGRLPVVTT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+ +L PKNAL +Q++ +F M +L F D+AL IAKKA+ + GARGLR
Sbjct: 312 LQELDEAALIDILTRPKNALTKQFQSLFKMEGSELEFRDEALIAIAKKALERKMGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LENIL + M+++P + VN V++D+ V + P
Sbjct: 372 SILENILLDTMYDLPSLE----GVNKVVIDESVVNGLSKP 407
>gi|289548352|ref|YP_003473340.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Thermocrinis
albus DSM 14484]
gi|289181969|gb|ADC89213.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermocrinis
albus DSM 14484]
Length = 412
Score = 357 bits (916), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 204/407 (50%), Positives = 267/407 (65%), Gaps = 58/407 (14%)
Query: 61 NRNRNSEGNI-DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHY 119
++ N+E + DLPTP++I + LD++VIGQE+AKK IL AVYNHY
Sbjct: 47 HKRSNTEFKLEDLPTPEKIKEILDQYVIGQEKAKK-----IL----------SVAVYNHY 91
Query: 120 KRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLL 179
KRI + +L ND VE+EKSN+LL+GPTGSGKTLL
Sbjct: 92 KRIRAKEMGLDL-----------------------ND--VEVEKSNILLIGPTGSGKTLL 126
Query: 180 AKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDK 239
A+TLA+I++VPF I DAT+LT+AGYVGED E+VL +LL +DV+AAQ+GIVYIDE+DK
Sbjct: 127 ARTLAKILDVPFAIADATSLTEAGYVGEDVENVLTRLLQNCGYDVKAAQKGIVYIDEIDK 186
Query: 240 IVKAESRNNG--RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILF 297
I + N RDVSGEGVQQALLK+LEGTV NVP P G RKHP + I +DT DILF
Sbjct: 187 IARKSGINPSITRDVSGEGVQQALLKILEGTVANVP-PQGG-RKHPHQEFIQVDTTDILF 244
Query: 298 ICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGL 357
ICGGAFVGLE I R S++GF A ++ G ++L V+ DL+ +G+
Sbjct: 245 ICGGAFVGLEDIIKRRLGKSTVGFEASIKKAHYEG---------NVLHLVEPDDLIHFGM 295
Query: 358 IPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAK 417
IPEFIGR P++ L L E+ LV++L+EPKNAL +QY+K+ +M V+L FT++ALR IA
Sbjct: 296 IPEFIGRLPVIAVLDELTEEDLVRILVEPKNALVKQYQKLLAMEGVELVFTEEALREIAA 355
Query: 418 KAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+A+ + TGARGLRA++E I+T+ MFE+P K V V+VD V
Sbjct: 356 EAIRRKTGARGLRAIMEEIMTDVMFEVPSLK----GVKKVVVDGRTV 398
>gi|337279217|ref|YP_004618689.1| ATP-dependent Clp protease ATP-binding subunit [Ramlibacter
tataouinensis TTB310]
gi|334730294|gb|AEG92670.1| candidate ATP-dependent Clp protease ATP-binding subunit
[Ramlibacter tataouinensis TTB310]
Length = 421
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 200/416 (48%), Positives = 266/416 (63%), Gaps = 57/416 (13%)
Query: 56 ETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAV 115
E G R + G DLPTP EI LD +VIGQE AK++ AV
Sbjct: 51 ELPAGEEAREARG--DLPTPGEIKSNLDNYVIGQETAKRA---------------LSVAV 93
Query: 116 YNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSG 175
YNHYKR+ H K+ + VEL KSN+LL+GPTGSG
Sbjct: 94 YNHYKRLRHKDKAKK--------------------------DDVELAKSNILLIGPTGSG 127
Query: 176 KTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYID 235
KTLLA+TLAR+++VPF + DAT LT+AGYVGED E+++ KLL + +++VE AQRGIVYID
Sbjct: 128 KTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIIQKLLQSCNYEVERAQRGIVYID 187
Query: 236 EVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKD 294
E+DKI K+++ + RDVSGEGVQQALLK++EGT+ +VP P G RKHP D + IDT +
Sbjct: 188 EIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVP-PQGG-RKHPNQDFLQIDTTN 245
Query: 295 ILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVA 354
ILFICGGAF GLEK I +R + S IGFGA V++ + LTD + V+ DL+
Sbjct: 246 ILFICGGAFAGLEKVIEQRTEASGIGFGAAVKSK-KQRSLTD------VFREVEPEDLIK 298
Query: 355 YGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRL 414
+GLIPE +GR P++ +L+ L+E+ LVQ+L EPKNAL +QY K+ SM V L +ALR
Sbjct: 299 FGLIPELVGRMPVVATLAELSEEALVQILTEPKNALVKQYGKLLSMEGVDLEIRPNALRA 358
Query: 415 IAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
IA+KA+A+ TGARGLR++LE L + MFE+P ++V+ V+VD+ + P
Sbjct: 359 IARKALARKTGARGLRSILEQSLIDTMFELP----NAANVDKVVVDESTIEENKPP 410
>gi|149181756|ref|ZP_01860247.1| ATP-dependent protease ATP-binding subunit [Bacillus sp. SG-1]
gi|148850497|gb|EDL64656.1| ATP-dependent protease ATP-binding subunit [Bacillus sp. SG-1]
Length = 424
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 197/377 (52%), Positives = 254/377 (67%), Gaps = 55/377 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI + LDE+VIGQE+AKKS AVYNHYKRI
Sbjct: 60 DVPKPKEIREILDEYVIGQEQAKKS---------------LAVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N N + D+ VEL KSN+ ++GPTGSGKTLLA+TLARI+NVP
Sbjct: 97 -------------------NSNSKVDD-VELSKSNIAMIGPTGSGKTLLAQTLARILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A+RGI+YIDE+DK+ K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAERGIIYIDEIDKVARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFICGGAF G+E+
Sbjct: 197 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTSNILFICGGAFDGIEQI 254
Query: 310 ISERRQDSSIGFGA-PVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
+ R IGFG+ P N+ SLL V DL+ +GLIPEFIGR P++
Sbjct: 255 VKRRLGQKVIGFGSDPKTVNVDND--------KSLLAKVVPEDLLKFGLIPEFIGRLPVI 306
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
SL+ L+ED LV++L +PKNAL +QY+KM ++ V+L F +DALR IA KA+ + TGARG
Sbjct: 307 SSLTPLDEDALVEILTKPKNALVKQYQKMLELDQVELEFEEDALREIANKAIERKTGARG 366
Query: 429 LRALLENILTEAMFEIP 445
LR+++E+I+ E MF++P
Sbjct: 367 LRSIIESIMLEVMFDLP 383
>gi|334564681|ref|ZP_08517672.1| ATP-dependent protease ATP-binding subunit ClpX [Corynebacterium
bovis DSM 20582]
Length = 428
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 210/450 (46%), Positives = 274/450 (60%), Gaps = 70/450 (15%)
Query: 51 IESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIG 110
IE E T R+R DLP P EI + LD +VIGQ+ AK++
Sbjct: 46 IEEEMVTAGDQRDRTD----DLPRPAEIAEFLDRYVIGQDAAKRT--------------- 86
Query: 111 ACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVE-NDEIVELEKSNVLLM 169
AVYNHYKRI V+ N + +D+ VEL KSN+L++
Sbjct: 87 LAVAVYNHYKRIR----------------------VEESNASARRSDDDVELSKSNILML 124
Query: 170 GPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQR 229
GPTGSGKT LA++LAR+++VPF I DAT+LT+AGYVGED E++L KLL +ADFDV AQR
Sbjct: 125 GPTGSGKTYLAQSLARMLDVPFAIADATSLTEAGYVGEDVENILLKLLQSADFDVAKAQR 184
Query: 230 GIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNI 288
GI+Y+DEVDKI K+E+ + RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I
Sbjct: 185 GIIYVDEVDKISRKSENPSITRDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPNQEFI 242
Query: 289 PIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVD 348
DTK++LFI GAF GLEK I+ERR +GFG VR G +D + V+
Sbjct: 243 QFDTKNVLFIVAGAFAGLEKVIAERRGRKGLGFGVEVR------GKSDE--EPDPFQFVE 294
Query: 349 SGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFT 408
GDLV +GLIPE IGR P++ + L+ED LV+VL EPKN+L RQY+++F M+ V+L F
Sbjct: 295 PGDLVKFGLIPELIGRLPVVTHVGHLDEDALVRVLTEPKNSLVRQYQRLFEMDGVRLTFD 354
Query: 409 DDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVD 468
DDALR IA++A+ + TGARGLR+++E IL MF IP D + G V
Sbjct: 355 DDALRAIARQALERETGARGLRSIMEGILLPVMFTIP--------------DDDDTGEV- 399
Query: 469 APGCGAKILHGDGELERVLHETKSAHENDS 498
A + GD E +R+ H+ + + S
Sbjct: 400 --VITADCVDGDSEPQRLTHDQVAERDKRS 427
>gi|85713355|ref|ZP_01044369.1| ATP-dependent protease ATP-binding subunit [Idiomarina baltica
OS145]
gi|85692822|gb|EAQ30806.1| ATP-dependent protease ATP-binding subunit [Idiomarina baltica
OS145]
Length = 425
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 262/401 (65%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI K LD++VIGQERAKK AVYNHYKR+ ++
Sbjct: 64 LPVPKEIRKHLDDYVIGQERAKKV---------------LSVAVYNHYKRLRNA------ 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G G ++D VEL KSN+LL+GPTGSGKT LA+T+AR ++VPF
Sbjct: 103 -----------GKG--------KDD--VELGKSNILLIGPTGSGKTFLAETMARFLDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE A+RGIVYIDE+DKI K+E+ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAERGIVYIDEIDKISRKSENPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILF+CGGAF GLE+ I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFVCGGAFAGLERVI 259
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA V++ ++ S ++ V+ DLV YGLIPEFIGR P++
Sbjct: 260 EQRLATGTGIGFGAQVKS-------PNSAAQSEIISQVEPEDLVRYGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L LNED LV++L EPKNAL +QY +F M +V+L F +DALR IAKKAM + TGARGL
Sbjct: 313 TLDELNEDALVEILREPKNALTKQYSALFEMEDVELEFREDALRAIAKKAMNRKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E +L M+++P V+ V+VD+ V P
Sbjct: 373 RSIVEGVLLSTMYDLP----SIDGVSKVVVDESVVAGESDP 409
>gi|256556953|gb|ACU83575.1| ATP-dependent protease Clp ATPase subunit [uncultured bacterium
HF130_AEPn_2]
Length = 427
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 257/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ + DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKGDE-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTRGGIGFSAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +AK+A+ + TGARGLR
Sbjct: 315 LDELDEAALIQILTEPKNALTKQYAKLFEMEGVDLEFRADALKSVAKRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSEVSKVVIDESVIEGKSKP 410
>gi|126733144|ref|ZP_01748891.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Roseobacter
sp. CCS2]
gi|126716010|gb|EBA12874.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Roseobacter
sp. CCS2]
Length = 421
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 192/400 (48%), Positives = 269/400 (67%), Gaps = 58/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP EIC LD++VIGQ AK+ AV+NHYKR+ H+
Sbjct: 63 VPTPSEICGVLDDYVIGQMHAKRV---------------LSVAVHNHYKRLNHAE----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KS +EL KSN++L+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ---------------KSD---------IELAKSNIMLIGPTGCGKTLLAQTLARILDVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 139 TMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 199 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
++R + S++GFGA VR + G + ++ DL+ +GLIPEF+GR P++ +
Sbjct: 257 AQRGKGSAMGFGADVREDDDRG-------IGEIFTDLEPEDLLKFGLIPEFVGRLPVIAT 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L+ED L+ +L +PKNAL +QY+++F + + KL FT+DAL IAK+A+ + TGARGLR
Sbjct: 310 LTDLDEDALITILTKPKNALVKQYQRLFDLEDTKLTFTEDALAAIAKRAIERKTGARGLR 369
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+++E+IL + MF++P G +V V+V++EAV S AP
Sbjct: 370 SIMEDILLDTMFDLP----GMDTVTEVVVNEEAVNSEVAP 405
>gi|22124935|ref|NP_668358.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia pestis
KIM10+]
gi|45440624|ref|NP_992163.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia pestis
biovar Microtus str. 91001]
gi|108808642|ref|YP_652558.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia pestis
Antiqua]
gi|108811099|ref|YP_646866.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia pestis
Nepal516]
gi|145600051|ref|YP_001164127.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia pestis
Pestoides F]
gi|149364998|ref|ZP_01887033.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
pestis CA88-4125]
gi|153950055|ref|YP_001402051.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
pseudotuberculosis IP 31758]
gi|162419302|ref|YP_001607419.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia pestis
Angola]
gi|165926541|ref|ZP_02222373.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165936053|ref|ZP_02224623.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Orientalis str. IP275]
gi|166011049|ref|ZP_02231947.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166212940|ref|ZP_02238975.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Antiqua str. B42003004]
gi|167398781|ref|ZP_02304305.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167421680|ref|ZP_02313433.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167423157|ref|ZP_02314910.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|170025450|ref|YP_001721955.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
pseudotuberculosis YPIII]
gi|186894327|ref|YP_001871439.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
pseudotuberculosis PB1/+]
gi|218930186|ref|YP_002348061.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia pestis
CO92]
gi|229838760|ref|ZP_04458919.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229896086|ref|ZP_04511256.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Yersinia pestis Pestoides A]
gi|229899328|ref|ZP_04514471.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Yersinia pestis biovar Orientalis str. India
195]
gi|229901328|ref|ZP_04516450.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Yersinia pestis Nepal516]
gi|270489514|ref|ZP_06206588.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis KIM D27]
gi|294504887|ref|YP_003568949.1| ATP-dependent protease ATP-binding subunit [Yersinia pestis
Z176003]
gi|384123357|ref|YP_005505977.1| ATP-dependent protease ATP-binding subunit [Yersinia pestis
D106004]
gi|384127208|ref|YP_005509822.1| ATP-dependent protease ATP-binding subunit [Yersinia pestis
D182038]
gi|384139000|ref|YP_005521702.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia pestis
A1122]
gi|384415838|ref|YP_005625200.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|420548226|ref|ZP_15046054.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-01]
gi|420553561|ref|ZP_15050817.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-02]
gi|420559162|ref|ZP_15055693.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-03]
gi|420564556|ref|ZP_15060527.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-04]
gi|420569606|ref|ZP_15065112.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-05]
gi|420575255|ref|ZP_15070225.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-06]
gi|420580579|ref|ZP_15075064.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-07]
gi|420585931|ref|ZP_15079912.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-08]
gi|420591042|ref|ZP_15084508.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-09]
gi|420596435|ref|ZP_15089360.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-10]
gi|420602103|ref|ZP_15094403.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-11]
gi|420607527|ref|ZP_15099303.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-12]
gi|420612924|ref|ZP_15104148.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-13]
gi|420618296|ref|ZP_15108829.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-14]
gi|420623595|ref|ZP_15113603.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-15]
gi|420628664|ref|ZP_15118201.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-16]
gi|420633804|ref|ZP_15122805.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-19]
gi|420638999|ref|ZP_15127488.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-25]
gi|420649755|ref|ZP_15137253.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-32]
gi|420655375|ref|ZP_15142302.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-34]
gi|420660901|ref|ZP_15147253.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-36]
gi|420666188|ref|ZP_15152009.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-42]
gi|420671059|ref|ZP_15156446.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-45]
gi|420676405|ref|ZP_15161306.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-46]
gi|420682023|ref|ZP_15166383.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-47]
gi|420687357|ref|ZP_15171121.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-48]
gi|420692573|ref|ZP_15175704.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-52]
gi|420698341|ref|ZP_15180777.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-53]
gi|420704162|ref|ZP_15185409.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-54]
gi|420709533|ref|ZP_15190170.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-55]
gi|420714992|ref|ZP_15195024.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-56]
gi|420720504|ref|ZP_15199752.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-58]
gi|420725979|ref|ZP_15204568.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-59]
gi|420731563|ref|ZP_15209587.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-60]
gi|420736582|ref|ZP_15214120.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-61]
gi|420742059|ref|ZP_15219041.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-63]
gi|420747777|ref|ZP_15223878.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-64]
gi|420753214|ref|ZP_15228730.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-65]
gi|420758992|ref|ZP_15233386.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-66]
gi|420764256|ref|ZP_15238000.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-71]
gi|420769491|ref|ZP_15242697.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-72]
gi|420774472|ref|ZP_15247208.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-76]
gi|420780088|ref|ZP_15252151.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-88]
gi|420785686|ref|ZP_15257044.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-89]
gi|420790832|ref|ZP_15261665.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-90]
gi|420796355|ref|ZP_15266630.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-91]
gi|420801409|ref|ZP_15271174.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-92]
gi|420806766|ref|ZP_15276024.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-93]
gi|420812132|ref|ZP_15280844.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-94]
gi|420817635|ref|ZP_15285814.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-95]
gi|420822952|ref|ZP_15290585.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-96]
gi|420828033|ref|ZP_15295152.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-98]
gi|420833739|ref|ZP_15300309.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-99]
gi|420838589|ref|ZP_15304688.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-100]
gi|420843780|ref|ZP_15309400.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-101]
gi|420849437|ref|ZP_15314482.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-102]
gi|420855105|ref|ZP_15319283.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-103]
gi|420860297|ref|ZP_15323853.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-113]
gi|421764660|ref|ZP_16201448.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia pestis
INS]
gi|21263471|sp|Q8ZC66.1|CLPX_YERPE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|122979462|sp|Q1C4K9.1|CLPX_YERPA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123246670|sp|Q1CL64.1|CLPX_YERPN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166215220|sp|A4TPE2.1|CLPX_YERPP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167009021|sp|A7FLC3.1|CLPX_YERP3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238687254|sp|A9QZQ2.1|CLPX_YERPG RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238688402|sp|B1JHS0.1|CLPX_YERPY RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238691418|sp|B2K6V8.1|CLPX_YERPB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|21957774|gb|AAM84609.1|AE013706_4 ATP-dependent specificity component of clpP serine protease,
chaperone [Yersinia pestis KIM10+]
gi|45435481|gb|AAS61040.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
pestis biovar Microtus str. 91001]
gi|108774747|gb|ABG17266.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
pestis Nepal516]
gi|108780555|gb|ABG14613.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
pestis Antiqua]
gi|115348797|emb|CAL21751.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
pestis CO92]
gi|145211747|gb|ABP41154.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
pestis Pestoides F]
gi|149291411|gb|EDM41485.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
pestis CA88-4125]
gi|152961550|gb|ABS49011.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pseudotuberculosis IP 31758]
gi|162352117|gb|ABX86065.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis Angola]
gi|165916198|gb|EDR34805.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Orientalis str. IP275]
gi|165921469|gb|EDR38666.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165990049|gb|EDR42350.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166205727|gb|EDR50207.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Antiqua str. B42003004]
gi|166960599|gb|EDR56620.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167051285|gb|EDR62693.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167057327|gb|EDR67073.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|169751984|gb|ACA69502.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pseudotuberculosis YPIII]
gi|186697353|gb|ACC87982.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pseudotuberculosis PB1/+]
gi|229681257|gb|EEO77351.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Yersinia pestis Nepal516]
gi|229687730|gb|EEO79803.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Yersinia pestis biovar Orientalis str. India
195]
gi|229695126|gb|EEO85173.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229701009|gb|EEO89038.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Yersinia pestis Pestoides A]
gi|262362953|gb|ACY59674.1| ATP-dependent protease ATP-binding subunit [Yersinia pestis
D106004]
gi|262366872|gb|ACY63429.1| ATP-dependent protease ATP-binding subunit [Yersinia pestis
D182038]
gi|270338018|gb|EFA48795.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis KIM D27]
gi|294355346|gb|ADE65687.1| ATP-dependent protease ATP-binding subunit [Yersinia pestis
Z176003]
gi|320016342|gb|ADV99913.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|342854129|gb|AEL72682.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia pestis
A1122]
gi|391423533|gb|EIQ86006.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-01]
gi|391423949|gb|EIQ86384.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-02]
gi|391424059|gb|EIQ86481.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-03]
gi|391438455|gb|EIQ99198.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-04]
gi|391439561|gb|EIR00201.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-05]
gi|391443390|gb|EIR03709.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-06]
gi|391455354|gb|EIR14478.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-07]
gi|391456212|gb|EIR15259.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-08]
gi|391458195|gb|EIR17076.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-09]
gi|391471130|gb|EIR28717.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-10]
gi|391472602|gb|EIR30048.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-11]
gi|391473490|gb|EIR30864.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-12]
gi|391487288|gb|EIR43238.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-13]
gi|391488765|gb|EIR44574.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-15]
gi|391489123|gb|EIR44902.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-14]
gi|391503159|gb|EIR57375.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-16]
gi|391503384|gb|EIR57584.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-19]
gi|391508659|gb|EIR62376.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-25]
gi|391520907|gb|EIR73423.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-34]
gi|391521815|gb|EIR74252.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-32]
gi|391533876|gb|EIR85117.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-36]
gi|391536805|gb|EIR87755.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-42]
gi|391539192|gb|EIR89935.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-45]
gi|391552140|gb|EIS01590.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-46]
gi|391552449|gb|EIS01870.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-47]
gi|391552916|gb|EIS02300.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-48]
gi|391567026|gb|EIS14941.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-52]
gi|391568186|gb|EIS15947.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-53]
gi|391572899|gb|EIS20067.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-54]
gi|391581437|gb|EIS27321.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-55]
gi|391583694|gb|EIS29324.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-56]
gi|391594116|gb|EIS38315.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-58]
gi|391597164|gb|EIS41013.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-60]
gi|391598289|gb|EIS42026.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-59]
gi|391611581|gb|EIS53745.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-61]
gi|391612096|gb|EIS54207.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-63]
gi|391615075|gb|EIS56882.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-64]
gi|391624693|gb|EIS65296.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-65]
gi|391629473|gb|EIS69404.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-66]
gi|391635405|gb|EIS74569.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-71]
gi|391637428|gb|EIS76348.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-72]
gi|391647378|gb|EIS85011.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-76]
gi|391651071|gb|EIS88294.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-88]
gi|391655513|gb|EIS92245.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-89]
gi|391660283|gb|EIS96458.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-90]
gi|391667869|gb|EIT03150.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-91]
gi|391677427|gb|EIT11735.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-93]
gi|391678249|gb|EIT12481.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-92]
gi|391678732|gb|EIT12920.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-94]
gi|391691355|gb|EIT24291.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-95]
gi|391694288|gb|EIT26961.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-96]
gi|391696020|gb|EIT28548.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-98]
gi|391708104|gb|EIT39389.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-99]
gi|391711592|gb|EIT42545.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-100]
gi|391712446|gb|EIT43324.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-101]
gi|391724275|gb|EIT53867.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-102]
gi|391725025|gb|EIT54532.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-103]
gi|391727618|gb|EIT56809.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-113]
gi|411174211|gb|EKS44244.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia pestis
INS]
Length = 423
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 202/422 (47%), Positives = 268/422 (63%), Gaps = 62/422 (14%)
Query: 51 IESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIG 110
I E + + +R+R+S LPTP EI LD++VIGQE AKK
Sbjct: 48 IREEIKEVSPHRDRSS-----LPTPHEIRHHLDDYVIGQEPAKKV--------------- 87
Query: 111 ACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMG 170
AVYNHYKR+ N + +EL KSN+LL+G
Sbjct: 88 LAVAVYNHYKRLR----------------------------NGDTSNGIELGKSNILLIG 119
Query: 171 PTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRG 230
PTGSGKTLLA+TLAR+++VPFT+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRG
Sbjct: 120 PTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRG 179
Query: 231 IVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIP 289
IVYIDE+DKI K+++ + RDVSGEGVQQALLK++EGT+ VP P G RKHP+ + +
Sbjct: 180 IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQ 237
Query: 290 IDTKDILFICGGAFVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVD 348
+DT ILFICGGAF GL+K I +R S IGFGA V+ G ++ LL V+
Sbjct: 238 VDTSKILFICGGAFAGLDKVIGQRINTGSGIGFGAVVK------GQSEKATEGELLSQVE 291
Query: 349 SGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFT 408
DL+ +GLIPEFIGR P++ +LS L+ED L+Q+L EPKNAL +QY+ +FS+ V+L F
Sbjct: 292 PEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFSLEGVELEFR 351
Query: 409 DDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVD 468
D+AL IAKKAMA+ TGARGLR+++E L + M+++P SV V+VD+ +
Sbjct: 352 DEALTAIAKKAMARKTGARGLRSIVEGALLDTMYDLP----SMDSVEKVVVDESVIAGQS 407
Query: 469 AP 470
AP
Sbjct: 408 AP 409
>gi|388602069|ref|ZP_10160465.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio campbellii
DS40M4]
gi|444425229|ref|ZP_21220674.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio campbellii
CAIM 519 = NBRC 15631]
gi|444241517|gb|ELU53040.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio campbellii
CAIM 519 = NBRC 15631]
Length = 426
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 259/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTPK+I + LD++VIGQ+ AKK AVYNHYKR+
Sbjct: 65 LPTPKQIREHLDDYVIGQDYAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 ---------------RNGDTTSEG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR+ T L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVATGTGIGFGAEVRSKNETK------TVGELFTQVEPEDLVKYGLIPEFIGRLPVTT 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY +F + + +L F +DALR IAKKAM + TGARGL
Sbjct: 315 TLTELDEEALIQILCEPKNALTKQYAALFELEDAELEFREDALRAIAKKAMERKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE++L E M+E+P + V+ V++D+ + P
Sbjct: 375 RSILESVLLETMYELP----SATDVSKVVIDESVIKGESEP 411
>gi|253996689|ref|YP_003048753.1| ATP-dependent protease ATP-binding subunit ClpX [Methylotenera
mobilis JLW8]
gi|253983368|gb|ACT48226.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylotenera
mobilis JLW8]
Length = 426
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 194/390 (49%), Positives = 256/390 (65%), Gaps = 51/390 (13%)
Query: 64 RNSEG----NIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHY 119
+NS+G + LPTP+EICK LD++VIGQ +AKK+ AVYNHY
Sbjct: 51 QNSDGLKSTDTSLPTPQEICKILDQYVIGQTQAKKN---------------LAVAVYNHY 95
Query: 120 KRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLL 179
KR+ H++L N + VE+ KSN+LL+GPTGSGKTLL
Sbjct: 96 KRLGHNNL-----------------------ANGGQKDEVEIAKSNILLIGPTGSGKTLL 132
Query: 180 AKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDK 239
A+TLAR+++VPF + DAT LT+AGYVGED E+++ KLL D+D E AQRGIVYIDEVDK
Sbjct: 133 AQTLARLLDVPFVMADATTLTEAGYVGEDVENIMQKLLQKCDYDTEKAQRGIVYIDEVDK 192
Query: 240 IV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFI 298
I K+++ + RDVSGEGVQQALLK++EGTV + IP G RKHP + + +DT +ILFI
Sbjct: 193 ISRKSDNPSITRDVSGEGVQQALLKLIEGTVAS--IPPQGGRKHPNQEFVQLDTTNILFI 250
Query: 299 CGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLI 358
CGGAF GLEK I R + IGFGA V++ D ++L V+ DL+ +GLI
Sbjct: 251 CGGAFDGLEKVIRLRSEKGGIGFGAEVKSK------ADVREVGAVLRDVEPEDLIKFGLI 304
Query: 359 PEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKK 418
PEFIGR P++ +L +L+E L+ +L EPKNAL +QY K+F M V L F + AL LIAKK
Sbjct: 305 PEFIGRLPVVATLESLDEAALMTILTEPKNALTKQYIKLFKMEGVDLEFRESALLLIAKK 364
Query: 419 AMAKNTGARGLRALLENILTEAMFEIPETK 448
A+ + TGARGLR+++E+ L E M+E+P K
Sbjct: 365 ALERKTGARGLRSIMEHSLLEVMYELPSLK 394
>gi|373455366|ref|ZP_09547202.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Dialister
succinatiphilus YIT 11850]
gi|371935006|gb|EHO62779.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Dialister
succinatiphilus YIT 11850]
Length = 411
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 190/386 (49%), Positives = 253/386 (65%), Gaps = 53/386 (13%)
Query: 64 RNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIY 123
+ + + LPTP+EI K +D++VI Q+ AK + AVYNHYKRI
Sbjct: 53 KKAAPHFKLPTPEEIKKYMDQYVIEQDDAK---------------MALAVAVYNHYKRIE 97
Query: 124 HSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTL 183
H D+ VEL+KSN++++GPTGSGKTLLA+TL
Sbjct: 98 HEG----------------------------EDDDVELQKSNIIMLGPTGSGKTLLAQTL 129
Query: 184 ARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-K 242
AR ++VPF I+DAT LT+AGYVGED E++L +L+ AAD+D++ A+RGIVYIDE+DKI K
Sbjct: 130 ARFLDVPFAISDATTLTEAGYVGEDVENILLRLIQAADYDIDKAERGIVYIDEIDKIARK 189
Query: 243 AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGA 302
+E+ + RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFICGGA
Sbjct: 190 SENPSITRDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPNQEMIQIDTTNILFICGGA 247
Query: 303 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFI 362
F G++K I R S +GFGA + D + LL+ V DL+ +GLIPEFI
Sbjct: 248 FAGIDKVIDRRLTKSVMGFGADIEKK-------DDRDMAELLQQVQPEDLLKFGLIPEFI 300
Query: 363 GRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAK 422
GR P++V L LNE+ LV++L EPKNAL RQY+K+ +M++V L F D A+ IA++A+ +
Sbjct: 301 GRLPVIVPLHPLNEEALVKILTEPKNALVRQYQKLLAMDHVDLEFDDGAIHAIARQAIER 360
Query: 423 NTGARGLRALLENILTEAMFEIPETK 448
NTGARGLRA++E I+ M+EIP K
Sbjct: 361 NTGARGLRAIIEKIMQHVMYEIPSMK 386
>gi|452820736|gb|EME27775.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Galdieria
sulphuraria]
Length = 533
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 183/308 (59%), Positives = 239/308 (77%), Gaps = 13/308 (4%)
Query: 159 VELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLA 218
VELEKSN+L++GPTGSGKTLLAKTLAR VNVPF I DAT LTQAGYVGED ES+LYKLL
Sbjct: 210 VELEKSNILIIGPTGSGKTLLAKTLARQVNVPFVIVDATTLTQAGYVGEDVESILYKLLQ 269
Query: 219 AADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDN 277
AA F++ AQ+GIVYIDE+DK K+E+ + RDVSGEGVQQALLKMLEGTVVNV P+
Sbjct: 270 AAHFNIPLAQKGIVYIDEIDKCSKKSENVSITRDVSGEGVQQALLKMLEGTVVNV--PEK 327
Query: 278 GPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDA 337
G RK+PRG+ I IDTK+ILF+CGGAF GLEK +++R +SIGFGA VR ++
Sbjct: 328 GGRKNPRGEFIQIDTKNILFMCGGAFAGLEKIVADRLAAASIGFGAMVRQQ------SNR 381
Query: 338 LVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKM 397
+ +S+L+ V+S D + YGLIPEF+GR PI + + +L DQLV +L +PKNAL +Q++++
Sbjct: 382 DLDASILDYVESTDFIKYGLIPEFVGRLPITLGVHSLTMDQLVSILTQPKNALVKQFQEL 441
Query: 398 FSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAV 457
++MN V+LH ++ ALRL+A +A+ K TGARGLRA+LE +L ++MF++P+ + V+AV
Sbjct: 442 YAMNGVELHMSEGALRLVAHEAIEKKTGARGLRAILERLLLDSMFDLPDLE----DVSAV 497
Query: 458 LVDKEAVG 465
VD E G
Sbjct: 498 YVDGEPGG 505
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 21/70 (30%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRI----YHSS 126
+ PTPK+I +GL+++VIGQE+AKK AVYNHYKR+ Y +S
Sbjct: 65 NFPTPKKIYEGLNDYVIGQEKAKKV---------------LSVAVYNHYKRVALNEYLTS 109
Query: 127 LQKEL--VSD 134
+ E VSD
Sbjct: 110 ISAETGEVSD 119
>gi|27262354|gb|AAN87458.1| ATP-dependent clp protease ATP-binding subunit ClpX [Heliobacillus
mobilis]
Length = 420
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 262/401 (65%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI + LD++VIGQ++AKK+ AVYNHYKRI
Sbjct: 61 DVPKPKEIREILDQYVIGQDQAKKA---------------LSVAVYNHYKRIN------- 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
LGS + +EL+KSN++++GPTGSGKTLLA+TLARI+NVP
Sbjct: 99 -----------LGSKIDD----------IELQKSNIVMLGPTGSGKTLLAQTLARILNVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A++GIVYIDE+DKI K+E+ +
Sbjct: 138 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I +DT +ILFICGGAF G++K
Sbjct: 198 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQLDTTNILFICGGAFDGIDKL 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R ++GF A ++ +L + GDL+ +GLIPEF+GR P++V
Sbjct: 256 IMNRVGKKAMGFNADIKGKQDKN-------IGEVLRDILPGDLLKFGLIPEFVGRLPVIV 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+ED LV++L EPKNAL +QY+K F ++ V L F D+ALR IA +A+ +NTGARGL
Sbjct: 309 TLDALDEDALVRILTEPKNALIKQYQKFFELDQVNLEFQDEALRAIAHEAIKRNTGARGL 368
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA++E ++ + MF+IP + V +V KE + P
Sbjct: 369 RAIIEEVMLDVMFDIP----SRNDVTKCMVTKEVILKQKEP 405
>gi|254441479|ref|ZP_05054972.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Octadecabacter antarcticus 307]
gi|198251557|gb|EDY75872.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Octadecabacter antarcticus 307]
Length = 422
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 194/418 (46%), Positives = 274/418 (65%), Gaps = 65/418 (15%)
Query: 64 RNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIY 123
+++EG +PTP EIC+ LD++VIGQ AK+ AV+NHYKR+
Sbjct: 58 KSAEG---VPTPLEICQVLDDYVIGQRHAKRV---------------LSVAVHNHYKRLN 99
Query: 124 HSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTL 183
H+ + +EL KSN++L+GPTG GKTLLA+TL
Sbjct: 100 HA-----------------------------DKSDIELAKSNIMLIGPTGCGKTLLAQTL 130
Query: 184 ARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-K 242
ARI++VPFT+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K
Sbjct: 131 ARILDVPFTMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRK 190
Query: 243 AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGA 302
+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILF+CGGA
Sbjct: 191 SDNPSITRDVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFVCGGA 248
Query: 303 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFI 362
F GL+K I++R + + +GFGA VR G + ++ DL+ +GLIPEF+
Sbjct: 249 FAGLDKIIAQRGKGAGMGFGAEVRGPDERG-------VGEIFNDLEPEDLLKFGLIPEFV 301
Query: 363 GRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAK 422
GR P++ +L L+ED LV +L +PKNAL +QY+++F + + KL FTDDAL IAK+A+ +
Sbjct: 302 GRLPVIATLEDLDEDALVTILSKPKNALVKQYQRLFELEDAKLTFTDDALVAIAKRAIER 361
Query: 423 NTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGD 480
TGARGLR+++E+IL + MFE+P G +V V+V++EAVG P ++H D
Sbjct: 362 KTGARGLRSIMEDILLDTMFELP----GMDTVTEVVVNEEAVG----PDAQPLMIHDD 411
>gi|91793846|ref|YP_563497.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella
denitrificans OS217]
gi|123060778|sp|Q12LA2.1|CLPX_SHEDO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91715848|gb|ABE55774.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
denitrificans OS217]
Length = 426
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 194/379 (51%), Positives = 251/379 (66%), Gaps = 53/379 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP E+ LDE+VIGQ++AKK AVYNHYKR+ + + +
Sbjct: 65 LPTPHELRNHLDEYVIGQDKAKKV---------------LAVAVYNHYKRLRNGTTK--- 106
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
E VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF
Sbjct: 107 -------------------------EGVELGKSNILLIGPTGSGKTLLAETLARSLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 AMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLEKVI 259
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA V+ G D S +L V+ DLV YGLIPEFIGR P++
Sbjct: 260 EQRAHTGTGIGFGAEVK------GEQDKATISQILGQVEPEDLVKYGLIPEFIGRLPVVA 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E L+Q+L +PKNAL +QY +F M NV+L F +DAL+ IAKKAM++ TGARGL
Sbjct: 314 TLTELDESALIQILSQPKNALTKQYGALFEMENVELEFREDALKAIAKKAMSRKTGARGL 373
Query: 430 RALLENILTEAMFEIPETK 448
R+++E IL + M+++P K
Sbjct: 374 RSIVEGILLDTMYDLPTVK 392
>gi|126640550|ref|YP_001083534.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ATCC 17978]
Length = 364
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 191/380 (50%), Positives = 253/380 (66%), Gaps = 50/380 (13%)
Query: 86 VIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSG 145
+IGQ+ AKK+ AVYNHYKR+ S H+ D
Sbjct: 1 MIGQDLAKKT---------------LSVAVYNHYKRLKVGQ------SGHVSKD------ 33
Query: 146 VKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYV 205
VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF + DAT LT+AGYV
Sbjct: 34 -------------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYV 80
Query: 206 GEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKM 264
GED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + RDVSGEGVQQALLKM
Sbjct: 81 GEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKM 140
Query: 265 LEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAP 324
+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK + +R++ IGF A
Sbjct: 141 IEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTAD 198
Query: 325 VRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLM 384
V+ T L + L V+ DLV +GLIPEFIGR P++ +L L+E+ L+Q+L
Sbjct: 199 VKNKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILT 252
Query: 385 EPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEI 444
EPKNAL RQY+ +F+M NV L F D ALR +AK+A+ +NTGARGLR++LEN+L E M+++
Sbjct: 253 EPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDL 312
Query: 445 P-ETKIGTSSVNAVLVDKEA 463
P T +GT +N +++ EA
Sbjct: 313 PSRTDVGTVFINEAVINGEA 332
>gi|398849722|ref|ZP_10606451.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM80]
gi|398966270|ref|ZP_10681429.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM30]
gi|398985562|ref|ZP_10691097.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM24]
gi|399015405|ref|ZP_10717678.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM16]
gi|424922479|ref|ZP_18345840.1| ClpX [Pseudomonas fluorescens R124]
gi|398108656|gb|EJL98609.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM16]
gi|398146238|gb|EJM34994.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM30]
gi|398153941|gb|EJM42432.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM24]
gi|398250437|gb|EJN35757.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM80]
gi|404303639|gb|EJZ57601.1| ClpX [Pseudomonas fluorescens R124]
Length = 427
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+ Q++
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLN----QRDK 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+D VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 106 KADD-----------------------VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTKGGIGFNAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +AK+A+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRTDALKSVAKRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSEVSKVVIDESVIEGKSKP 410
>gi|260773193|ref|ZP_05882109.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
metschnikovii CIP 69.14]
gi|260612332|gb|EEX37535.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
metschnikovii CIP 69.14]
Length = 426
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 258/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP+EI + LD++VIGQE AKK AVYNHYKR+
Sbjct: 65 LPTPREIREHLDDYVIGQEHAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ + VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 ---------------RNGDTTSDG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLVEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFSGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + + IGFGA VR+ + L S L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVAKGTGIGFGAEVRSKDNSKSL------SELFTQVEPEDLVKYGLIPEFIGRLPVTA 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E L+Q+L EPKNAL +QY +F + +L F +DALR IA KAM + TGARGL
Sbjct: 315 TLTELDEKALIQILCEPKNALTKQYAALFELEKAELEFREDALRAIAAKAMKRKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LEN+L E M+E+P + V V++D+ + P
Sbjct: 375 RSILENVLLETMYELP----SMADVEKVVIDESVINGESEP 411
>gi|153835694|ref|ZP_01988361.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
harveyi HY01]
gi|156973713|ref|YP_001444620.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio harveyi
ATCC BAA-1116]
gi|269961044|ref|ZP_06175413.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio harveyi
1DA3]
gi|424033221|ref|ZP_17772636.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HENC-01]
gi|424042694|ref|ZP_17780375.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HENC-02]
gi|424047073|ref|ZP_17784634.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HENC-03]
gi|166215218|sp|A7MV82.1|CLPX_VIBHB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|148867675|gb|EDL66951.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
harveyi HY01]
gi|156525307|gb|ABU70393.1| hypothetical protein VIBHAR_01418 [Vibrio harveyi ATCC BAA-1116]
gi|269834263|gb|EEZ88353.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio harveyi
1DA3]
gi|408874955|gb|EKM14117.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HENC-01]
gi|408884371|gb|EKM23115.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HENC-03]
gi|408887527|gb|EKM26079.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HENC-02]
Length = 426
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 259/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTPK+I + LD++VIGQ+ AKK AVYNHYKR+
Sbjct: 65 LPTPKQIREHLDDYVIGQDYAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 ---------------RNGDTTSEG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR+ T L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVATGTGIGFGAEVRSKNETK------TVGELFTQVEPEDLVKYGLIPEFIGRLPVTT 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY +F + + +L F +DALR IAKKAM + TGARGL
Sbjct: 315 TLTELDEEALIQILCEPKNALTKQYAALFELEDAELEFREDALRAIAKKAMERKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE++L E M+E+P + V+ V++D+ + P
Sbjct: 375 RSILESVLLETMYELP----SATDVSKVVIDESVINGESEP 411
>gi|157363410|ref|YP_001470177.1| ATP-dependent protease ATP-binding subunit ClpX [Thermotoga
lettingae TMO]
gi|157314014|gb|ABV33113.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermotoga
lettingae TMO]
Length = 404
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 195/411 (47%), Positives = 264/411 (64%), Gaps = 57/411 (13%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
++ E +LP P EI LD++VIGQE+AK+ AVYNHYK
Sbjct: 42 DKRVKREKRRELPKPAEIKAELDKYVIGQEKAKRV---------------ISVAVYNHYK 86
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
R+++ S +ND+ VE+EKSN++L+GPTGSGKTL+A
Sbjct: 87 RVFYES---------------------------DNDD-VEIEKSNIMLIGPTGSGKTLIA 118
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+ LA+I++VPF I DAT LT+AGYVGED E+V+ +LL A FDVE Q GIVYIDE+DKI
Sbjct: 119 RVLAKILDVPFAIADATPLTEAGYVGEDVENVILRLLEVAHFDVERTQYGIVYIDEIDKI 178
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K+ + + RDVSGEGVQQALLK++EGTV NVP P G RKHP + I +DT +ILFI
Sbjct: 179 ARKSPNPSITRDVSGEGVQQALLKIVEGTVANVP-PQGG-RKHPYQEFIKVDTSNILFIV 236
Query: 300 GGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIP 359
GGAF GLE+ + R QDSS+GFGA +++ R + +L V DLV YG+IP
Sbjct: 237 GGAFDGLEEIVKRRIQDSSMGFGADIKSKKR-------MRLGEILSHVVPDDLVQYGMIP 289
Query: 360 EFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKA 419
EF+GRFP++ +L L E+ LV++L EPKNA+ +QYKK+F ++N++L T DAL IA+KA
Sbjct: 290 EFVGRFPVIATLDDLTEEDLVRILNEPKNAIVKQYKKLFQLDNIELEITKDALYAIARKA 349
Query: 420 MAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+ K TGAR L+ + E ++ + MFEIP TK +V V+V +E+V + P
Sbjct: 350 LTKGTGARALKGVFEEVMIDVMFEIPSTK----NVEKVVVTRESVEGKEKP 396
>gi|297544143|ref|YP_003676445.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296841918|gb|ADH60434.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 424
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 192/379 (50%), Positives = 256/379 (67%), Gaps = 53/379 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LP PKEI + LD++VIGQE+AKK+ AVYNHYKRI
Sbjct: 59 ELPKPKEIKEFLDQYVIGQEKAKKA---------------LAVAVYNHYKRI-------- 95
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N ++ D+ VEL+KSN+LL+GPTGSGKTLLA+TLA+++NVP
Sbjct: 96 -------------------NSRLKPDD-VELQKSNILLLGPTGSGKTLLAQTLAKLLNVP 135
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E A++GI+YIDE+DKI K+E+ +
Sbjct: 136 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAEKGIIYIDEIDKIARKSENPSIT 195
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ NVP P G RKHP + I IDT +ILFICGGAF GLEK
Sbjct: 196 RDVSGEGVQQALLKILEGTIANVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFEGLEKI 253
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R ++GFG+ V++ +L + DL+ +G+IPEFIGR PI+V
Sbjct: 254 IESRIGKKTLGFGSDVQSRKEKN-------IGEILSHIMPEDLLKFGMIPEFIGRVPIVV 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+++ LV++L EPKNAL +QY+K+F ++ VKL F AL LIA KA+ + TGARGL
Sbjct: 307 TLDPLDKEDLVRILTEPKNALVKQYEKLFELDGVKLEFDKKALNLIADKALERKTGARGL 366
Query: 430 RALLENILTEAMFEIPETK 448
RA+LE I+ + M+EIP ++
Sbjct: 367 RAILEEIMLDVMYEIPSSE 385
>gi|15895897|ref|NP_349246.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
acetobutylicum ATCC 824]
gi|337737850|ref|YP_004637297.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
acetobutylicum DSM 1731]
gi|384459360|ref|YP_005671780.1| ATP-dependent protease ATP-binding subunit [Clostridium
acetobutylicum EA 2018]
gi|21263476|sp|Q97FT7.1|CLPX_CLOAB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|15025666|gb|AAK80586.1|AE007761_5 ATP-dependent protease Clp, ATPase subunit ClpX [Clostridium
acetobutylicum ATCC 824]
gi|325510049|gb|ADZ21685.1| ATP-dependent protease ATP-binding subunit [Clostridium
acetobutylicum EA 2018]
gi|336292453|gb|AEI33587.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
acetobutylicum DSM 1731]
Length = 432
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 197/411 (47%), Positives = 269/411 (65%), Gaps = 65/411 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++V+GQE AKKS AVYNHYKRI
Sbjct: 60 LPKPSEIKDYLDQYVVGQEDAKKS---------------LSVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N N+ N++ +EL+KSN+LL+GPTG GKT LA+TLA+ +NVPF
Sbjct: 96 ------------------NSNLSNNDDIELQKSNILLLGPTGCGKTFLAQTLAKFLNVPF 137
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ AD+DVE A++GI+YIDE+DKI K+E+ + R
Sbjct: 138 AIADATTLTEAGYVGEDVENILLKLIQNADYDVERAEKGIIYIDEIDKIARKSENPSITR 197
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV +VP P G RKHP + I I+T +ILFICGGAF G++K I
Sbjct: 198 DVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQINTTNILFICGGAFDGVDKII 255
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R + S+IGFGA +++ + ++L+ + GDL+ +GLIPEFIGR PI+V+
Sbjct: 256 ENRTRVSTIGFGASIQSKQQKD-------IGAILKKIMPGDLLKFGLIPEFIGRLPIIVT 308
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L++L++ LV+VL EPKNAL +QY+K+ M+NV+L F D AL+ IA +A++++TGARGLR
Sbjct: 309 LNSLDQGALVKVLSEPKNALVKQYEKLLQMDNVELEFKDGALKAIASEAISRSTGARGLR 368
Query: 431 ALLENILTEAMFEIP-----------ETKIGTSSVNAVLVDKEAVGSVDAP 470
A++E+I+ + MF+IP E I T VL +E +++AP
Sbjct: 369 AIVEDIMKDIMFDIPSREDVKKVIVTENTINTKQPELVL--EEGAKAIEAP 417
>gi|187776851|ref|ZP_02993324.1| hypothetical protein CLOSPO_00390 [Clostridium sporogenes ATCC
15579]
gi|187775510|gb|EDU39312.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
sporogenes ATCC 15579]
Length = 429
Score = 357 bits (915), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 195/396 (49%), Positives = 264/396 (66%), Gaps = 57/396 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQE AKKS AVYNHYKRI
Sbjct: 60 LPKPTEIKTYLDQYVIGQEDAKKS---------------LSVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N N ND+ VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF
Sbjct: 96 ------------------NSNTNNDD-VELQKSNILLLGPTGSGKTLLAQTLAKFLNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ AD+D+E A++GIVYIDE+DKI K+E+ + R
Sbjct: 137 AIADATTLTEAGYVGEDVENILLKLIQNADYDIERAEKGIVYIDEIDKIARKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV VP P G RKHP + I I+T +ILFICGGAF G++K I
Sbjct: 197 DVSGEGVQQALLKILEGTVAAVP-PQGG-RKHPHQEFIQINTTNILFICGGAFDGVDKII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R + SS+GFGA +++ LL+ + GDL+ +GLIPEFIGR PI+V+
Sbjct: 255 ERRTRTSSLGFGAEIQSKKEKD-------LGKLLKDIMPGDLLKFGLIPEFIGRLPIVVT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ + L+++L EPKNAL +QYKK+F +++V+L F +AL+ IA +A+ +NTGARGLR
Sbjct: 308 LDKLDREALIKILTEPKNALVKQYKKLFELDDVELEFNQEALKGIADEAINRNTGARGLR 367
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
A++E+++ E MF+IP +++ V+V+++ + +
Sbjct: 368 AIIEDMMREIMFDIP----SQENISKVIVNEDCIKT 399
>gi|146282419|ref|YP_001172572.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri A1501]
gi|145570624|gb|ABP79730.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
stutzeri A1501]
Length = 441
Score = 357 bits (915), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 196/400 (49%), Positives = 257/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQERAKK I + AVYNHYKR+ ++E
Sbjct: 80 LPAPKEISGILDQYVIGQERAKK--ILAV-------------AVYNHYKRLNQRDKKEE- 123
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 124 ---------------------------VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 156
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 157 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 216
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 217 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFAGLEKVI 274
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + +A L +V+ DLV +GLIPEF+GR P++ +
Sbjct: 275 QSRSTQGGIGFNAEVRSKDPGKKIGEA------LRAVEPDDLVKFGLIPEFVGRLPVIAT 328
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F + V L F DAL+ +A +A+ + TGARGLR
Sbjct: 329 LDELDEAALIQILTEPKNALTKQYAKLFELEGVDLEFRPDALKAVAHRALERKTGARGLR 388
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP K V+ V++D+ + P
Sbjct: 389 SILEGVLLDTMYEIPSQK----DVSKVVIDESVIEGTSQP 424
>gi|296446425|ref|ZP_06888369.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylosinus
trichosporium OB3b]
gi|296256060|gb|EFH03143.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylosinus
trichosporium OB3b]
Length = 420
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 191/394 (48%), Positives = 264/394 (67%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EICK LD++VIGQ +AK+ AV+NHYKR+ H++
Sbjct: 62 IPTPREICKVLDDYVIGQAQAKRV---------------LSVAVHNHYKRLNHAT----- 101
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G+ VEL KSN+LL+GPTG GKT+LA+TLARI++VPF
Sbjct: 102 ---------------KHGD--------VELAKSNILLIGPTGVGKTMLAQTLARILDVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVY+DE+DKI K+++ + R
Sbjct: 139 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYVDEIDKISRKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 199 DVSGEGVQQALLKIMEGTIASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+A D T + V DL+ +GLIPEF+GR P++ +
Sbjct: 257 SSRGRGTSIGFGATVQA-------PDERRTGDIFRHVQPEDLLKFGLIPEFVGRLPVIAT 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L ++L EPKNAL +QY+++F M + +L F D+AL +A+KA+ ++TGARGLR
Sbjct: 310 LEDLDEEALKRILTEPKNALVKQYQRLFEMESTELTFQDEALSSVARKAIERHTGARGLR 369
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E IL + MFE+P G V V++ E V
Sbjct: 370 SIMEGILLDTMFELP----GLEGVEQVVIGPEVV 399
>gi|126462594|ref|YP_001043708.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodobacter
sphaeroides ATCC 17029]
gi|221639634|ref|YP_002525896.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodobacter
sphaeroides KD131]
gi|332558620|ref|ZP_08412942.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodobacter
sphaeroides WS8N]
gi|429209760|ref|ZP_19200987.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rhodobacter
sp. AKP1]
gi|166215194|sp|A3PKS0.1|CLPX_RHOS1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763860|sp|B9KJU8.1|CLPX_RHOSK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|126104258|gb|ABN76936.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodobacter
sphaeroides ATCC 17029]
gi|221160415|gb|ACM01395.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhodobacter
sphaeroides KD131]
gi|332276332|gb|EGJ21647.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodobacter
sphaeroides WS8N]
gi|428187303|gb|EKX55888.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rhodobacter
sp. AKP1]
Length = 421
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 191/375 (50%), Positives = 256/375 (68%), Gaps = 54/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EICK LD++VIGQ AK+ AV+NHYKR+ HSS
Sbjct: 63 VPTPREICKVLDDYVIGQMHAKRV---------------LSVAVHNHYKRLNHSS----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ D +EL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ----------------------KTD--IELSKSNILLIGPTGCGKTLLAQTLARILDVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 139 TMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 199 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
++R + S IGFGA V+ DA L + ++ DL+ +GLIPEF+GR P++ +
Sbjct: 257 AQRGKGSGIGFGAEVKD-------PDARGVGELFKELEPEDLLKFGLIPEFVGRLPVIAT 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L+E LV +L EPKNAL +QY+++F + VKL FT DAL IAK+A+ + TGARGLR
Sbjct: 310 LTDLDEAALVTILTEPKNALVKQYQRLFEIEGVKLTFTADALTAIAKRAIKRKTGARGLR 369
Query: 431 ALLENILTEAMFEIP 445
+++E+IL + MFE+P
Sbjct: 370 SIMEDILLDTMFELP 384
>gi|71734283|ref|YP_273936.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|123637276|sp|Q48KY9.1|CLPX_PSE14 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|71554836|gb|AAZ34047.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. phaseolicola 1448A]
Length = 427
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 196/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ +ND+ VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKNDD-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DV+ AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTRGGIGFNAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +A++A+ + TGARGLR
Sbjct: 315 LDELDEAALIQILTEPKNALTKQYAKLFEMEGVDLEFRTDALKSVARRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSDVSKVVIDESVIDGTSKP 410
>gi|54297777|ref|YP_124146.1| ATP-dependent protease ATP-binding subunit ClpX [Legionella
pneumophila str. Paris]
gi|61211415|sp|Q5X452.1|CLPX_LEGPA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|53751562|emb|CAH12980.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
pneumophila str. Paris]
Length = 424
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 192/400 (48%), Positives = 258/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTPKEI LDE+VIGQ+ AKK AVYNHYKR+ H S
Sbjct: 63 LPTPKEISNFLDEYVIGQQHAKKV---------------LSVAVYNHYKRLQHKS----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++ VEL KSN+LL+GPTGSGKTLLA+TLARI+NVPF
Sbjct: 103 ------------------------EDGVELGKSNILLIGPTGSGKTLLAQTLARILNVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL D+DV+ AQ+GIVYIDE+DKI K+++ + R
Sbjct: 139 AMADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAQQGIVYIDEIDKISRKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 199 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSNILFICGGAFAGLDKVI 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
ER SSIGF A +++ + S +L ++S DL+ YGLIPEF+GR P++ +
Sbjct: 257 RERSDKSSIGFSAQLKSKKSSND-----EASKVLGQLESDDLIKYGLIPEFVGRLPVVTT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+ +L PKNAL +Q++ +F M +L F D+AL IAKKA+ + GARGLR
Sbjct: 312 LQELDEAALIDILTRPKNALTKQFQSLFKMEGSELEFRDEALIAIAKKALERKMGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LENIL + M+++P + VN +++D+ V + P
Sbjct: 372 SILENILLDTMYDLPSLE----GVNKIVIDESVVNGLSKP 407
>gi|429216066|ref|ZP_19207225.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
M1]
gi|428153719|gb|EKX00273.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
M1]
Length = 426
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 195/400 (48%), Positives = 255/400 (63%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQERAKK+ AVYNHYKR+ + +
Sbjct: 65 LPAPKEIRSILDQYVIGQERAKKT---------------LAVAVYNHYKRLNQRDRKDD- 108
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 109 ---------------------------VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFAGLEKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + +A L V+ DLV +GLIPEF+GR PI+ +
Sbjct: 260 QNRSTKGGIGFSAEVRSQEMGKKVGEA------LREVEPEDLVKFGLIPEFVGRLPIIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY ++F M V L F DAL+ +A++A+ + TGARGLR
Sbjct: 314 LDELDEAALMQILTEPKNALTKQYARLFEMEGVDLEFRPDALKAVARRALERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE IL + M+EIP + V+ V++D+ + P
Sbjct: 374 SILEGILLDTMYEIP----SQTEVSKVVIDESVIDGSSQP 409
>gi|410627459|ref|ZP_11338198.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
mesophila KMM 241]
gi|410152951|dbj|GAC24967.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
mesophila KMM 241]
Length = 425
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 196/402 (48%), Positives = 266/402 (66%), Gaps = 57/402 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTPKEI LD++VIGQE AKK AVYNHYKR+
Sbjct: 64 ELPTPKEIHSHLDDYVIGQEHAKKV---------------LSVAVYNHYKRL-------- 100
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
++G+ + + VEL KSN+LLMGPTGSGKTLLA+TLAR+++VP
Sbjct: 101 ----------------RNGDVH----DGVELGKSNILLMGPTGSGKTLLAETLARLLDVP 140
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
FT+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ +
Sbjct: 141 FTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSIT 200
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT ILFICGGAF GL+K
Sbjct: 201 RDVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKV 258
Query: 310 ISERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I +R + IGFG ++ + ++ LL+ V+ DLV YGLIPEFIGR P+L
Sbjct: 259 IEQRAHTGTGIGFGTAIKDS------SNKSKEGELLKKVEPEDLVKYGLIPEFIGRLPVL 312
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
SL L+E+ L+Q+L EPKN+L +QY +FS+ + +L F +DAL+ IAKKAM++ TGARG
Sbjct: 313 TSLEELSEEALIQILREPKNSLTKQYAALFSLEDTELEFREDALQAIAKKAMSRKTGARG 372
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E +L + M+E+P S+V+ V+VD+ + P
Sbjct: 373 LRSIVEAVLLDTMYELP----SMSNVSKVVVDETVIRGESKP 410
>gi|304437033|ref|ZP_07396996.1| ATP-dependent Clp protease ATP-binding subunit [Selenomonas sp.
oral taxon 149 str. 67H29BP]
gi|304369984|gb|EFM23646.1| ATP-dependent Clp protease ATP-binding subunit [Selenomonas sp.
oral taxon 149 str. 67H29BP]
Length = 421
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 201/411 (48%), Positives = 266/411 (64%), Gaps = 61/411 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI + LD++VIGQ+ AKKS AVYNHYKRI+
Sbjct: 60 DIPKPKEIRRILDQYVIGQDEAKKS---------------LSVAVYNHYKRIHA------ 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
G G +E VEL KSNVL++GPTGSGKTLLA+TLARI+NVP
Sbjct: 99 ------------GQG---------KNEDVELRKSNVLMIGPTGSGKTLLAQTLARILNVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E AQRGI+YIDE+DKI K+E+ +
Sbjct: 138 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAQRGIIYIDEIDKIARKSENPSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQ LLK+LEGT +VP P G RKHP+ + + IDT +ILFICGG+F GLE+
Sbjct: 198 RDVSGEGVQQGLLKILEGTTASVP-PQGG-RKHPQQELLQIDTTNILFICGGSFDGLEEI 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R +GFGA VR+ R + + L + DL+ GLIPEFIGR P++V
Sbjct: 256 IESRLGKKQMGFGAEVRSKRR-------VTVGASLSKIIPEDLMKNGLIPEFIGRLPVVV 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L++L+E+ LV++L EPKNAL +Q++K+ ++ V+L F +DAL LIAK+A+ TGARGL
Sbjct: 309 TLNSLDEEALVRILTEPKNALVKQFQKLLELDGVRLTFEEDALHLIAKEALTHKTGARGL 368
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP-----GCGAK 475
RA++E I+ M+E+P V A V K+ + + AP G GA+
Sbjct: 369 RAIVEGIMRNVMYEVP----SIHGVTACQVTKDVIVNHSAPILTIDGAGAQ 415
>gi|333892290|ref|YP_004466165.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas sp.
SN2]
gi|332992308|gb|AEF02363.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas sp.
SN2]
Length = 425
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 260/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQE AKK AVYNHYKR+
Sbjct: 65 LPKPSEIHAHLDDYVIGQEHAKKV---------------LSVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ + + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 ---------------RNGDVH----DGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 259
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R Q + IGFGA V++ + S L + V+ DLV YGLIPEFIGR P++
Sbjct: 260 EQRAQKGTGIGFGAAVKSKSE-----NTAQISELFKQVEPQDLVKYGLIPEFIGRLPVVT 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SL LNE+ L+Q+L EPKNA+ +QY +F M +V+L F DDAL IAKKAM + TGARGL
Sbjct: 315 SLEELNEEALIQILKEPKNAITKQYSALFDMEDVELEFRDDALHAIAKKAMERKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E +L + M+E+P V+ V++D+ + P
Sbjct: 375 RSIVEAVLLDTMYELP----SAVDVSKVVIDETVIRGESKP 411
>gi|300023468|ref|YP_003756079.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Hyphomicrobium
denitrificans ATCC 51888]
gi|299525289|gb|ADJ23758.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Hyphomicrobium denitrificans ATCC 51888]
Length = 415
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 198/389 (50%), Positives = 260/389 (66%), Gaps = 53/389 (13%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
N+N + +PTP+EIC LD +VIGQ AK+ AV+NHYK
Sbjct: 47 NKNTLVKSRDGVPTPQEICNVLDSYVIGQFHAKRV---------------LSVAVHNHYK 91
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
R+ H++ ND VEL KSN+LL+GPTGSGKTLLA
Sbjct: 92 RLNHATKN--------------------------ND--VELAKSNILLVGPTGSGKTLLA 123
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+TLARI++VPFT+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDEVDKI
Sbjct: 124 QTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEVDKI 183
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFIC
Sbjct: 184 SRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFIC 241
Query: 300 GGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIP 359
GGAF GLEK IS R + SSIGF A V TG D T +L V+ DL+ +GLIP
Sbjct: 242 GGAFAGLEKIISRRGKGSSIGFSARV-----TG--PDERRTGDILRGVEPEDLLKFGLIP 294
Query: 360 EFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKA 419
EFIGR P++ +L L+E LVQ+L EPKNA+ +QY+++F M +VKL T DALR I++KA
Sbjct: 295 EFIGRLPVIATLEDLDEAALVQILTEPKNAIVKQYQRLFEMEDVKLTITLDALRAISRKA 354
Query: 420 MAKNTGARGLRALLENILTEAMFEIPETK 448
+ + TGARGLR+++E IL + M+++P K
Sbjct: 355 IERKTGARGLRSIMEGILLDTMYDLPTLK 383
>gi|56551845|ref|YP_162684.1| ATP-dependent protease ATP-binding subunit ClpX [Zymomonas mobilis
subsp. mobilis ZM4]
gi|260752593|ref|YP_003225486.1| ATP-dependent protease ATP-binding subunit ClpX [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
gi|384411290|ref|YP_005620655.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|61211394|sp|Q5NNY7.1|CLPX_ZYMMO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|56543419|gb|AAV89573.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Zymomonas
mobilis subsp. mobilis ZM4]
gi|258551956|gb|ACV74902.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|335931664|gb|AEH62204.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Zymomonas
mobilis subsp. mobilis ATCC 10988]
Length = 422
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 193/403 (47%), Positives = 262/403 (65%), Gaps = 57/403 (14%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
R +G+ +PTP+EIC LD++VIGQ +AK+ AV+NHYK
Sbjct: 52 TRGALHKGDGSVPTPQEICTILDQYVIGQSKAKRV---------------LSVAVHNHYK 96
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
R+ H D VEL KSN+LL+GPTG GKTLLA
Sbjct: 97 RLNHGG----------------------------KDADVELAKSNILLIGPTGCGKTLLA 128
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+TLAR +VPFT+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI
Sbjct: 129 ETLARTFDVPFTMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKI 188
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K+++ + RDVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT +ILFIC
Sbjct: 189 TRKSDNPSITRDVSGEGVQQALLKLMEGTTASVP-PQGG-RKHPQQEFLQVDTTNILFIC 246
Query: 300 GGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIP 359
GGAF GL++ I++R + SIGFGA V A D T +L+ + DL+ +GLIP
Sbjct: 247 GGAFAGLDRIIADRLEGKSIGFGAHVAA-------PDERRTGEILQECEPEDLLKFGLIP 299
Query: 360 EFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKA 419
EF+GR P+L +L L++ LV++L EPKNAL +QY+K+F + + KL FT+DAL IAKK
Sbjct: 300 EFVGRLPVLATLEDLDQSALVRILTEPKNALVKQYQKLFELEDAKLEFTEDALAAIAKKG 359
Query: 420 MAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKE 462
+ + TGARGLR++LE IL + MFE+P + V+ ++VDK+
Sbjct: 360 IERKTGARGLRSILEGILLDTMFELPSLE----GVSEIIVDKD 398
>gi|315924139|ref|ZP_07920365.1| ATP-dependent Clp protease ATP-binding subunit [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315622541|gb|EFV02496.1| ATP-dependent Clp protease ATP-binding subunit [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 431
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 196/415 (47%), Positives = 268/415 (64%), Gaps = 63/415 (15%)
Query: 51 IESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIG 110
I+SESE+E ++PTPKEI LD +VIGQ+ AKK+
Sbjct: 48 IDSESESEPILYT-------EVPTPKEIKAALDTYVIGQDEAKKA--------------- 85
Query: 111 ACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMG 170
AVYNHYKRI N +D+ VE++KSN+LL+G
Sbjct: 86 LSVAVYNHYKRI---------------------------NAAETDDDDVEIQKSNILLIG 118
Query: 171 PTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRG 230
PTGSGKTLLA+TLARI++VPF I DAT LT+AGYVGED E++L KLL AAD D+E A++G
Sbjct: 119 PTGSGKTLLAQTLARILDVPFAIADATTLTEAGYVGEDVENILLKLLQAADMDIERAEKG 178
Query: 231 IVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIP 289
I+YIDE+DKI K+E+ + RDVSGEGVQQALLK+LEGTV NVP P G RKHP+ + I
Sbjct: 179 IIYIDEIDKISRKSENPSITRDVSGEGVQQALLKILEGTVANVP-PQGG-RKHPQQEFIQ 236
Query: 290 IDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDS 349
+DTKDILFICGGAF G+E+ I++R + SIGF A +R+ + +++E +
Sbjct: 237 LDTKDILFICGGAFDGIEEVIAKRLEKGSIGFDATIRSRVEKED-------DAMMEKIVP 289
Query: 350 GDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTD 409
D++ YGLIPEFIGR P++ +L L+E+ L+ +L EPKNAL +Q++K+ + +V L F
Sbjct: 290 HDILKYGLIPEFIGRIPVIATLKHLDEEALINILTEPKNALVKQFQKLLRLEDVDLTFEP 349
Query: 410 DALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+AL IAKKAMA TGARGLR ++E ++ + M+E+P S ++ + + K+ +
Sbjct: 350 EALSEIAKKAMATKTGARGLRGIIERVMMDLMYEVP----SESDISHITITKDMI 400
>gi|148269914|ref|YP_001244374.1| ATP-dependent protease ATP-binding subunit ClpX [Thermotoga
petrophila RKU-1]
gi|170288599|ref|YP_001738837.1| ATP-dependent protease ATP-binding subunit ClpX [Thermotoga sp.
RQ2]
gi|281412205|ref|YP_003346284.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermotoga
naphthophila RKU-10]
gi|147735458|gb|ABQ46798.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Thermotoga
petrophila RKU-1]
gi|170176102|gb|ACB09154.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermotoga
sp. RQ2]
gi|281373308|gb|ADA66870.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermotoga
naphthophila RKU-10]
Length = 406
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 198/403 (49%), Positives = 264/403 (65%), Gaps = 61/403 (15%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
++PTP EI LD+++IGQERAKK AVYNHYKR++ +
Sbjct: 54 EIPTPAEIKAELDKYIIGQERAKKV---------------LSVAVYNHYKRVFSN----- 93
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+DS ND VE+EKSNVLL+GPTG+GKT LA+ LA+I+NVP
Sbjct: 94 -------LDS--------------ND--VEIEKSNVLLIGPTGTGKTYLARILAKILNVP 130
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNN-G 249
F I DAT LT+AGYVGED E+V+ +LL AA+FD+E AQ GI+YIDE+DKI K +
Sbjct: 131 FAIADATPLTEAGYVGEDVENVVLRLLEAANFDIERAQYGIIYIDEIDKIAKKSPNPSIT 190
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ NVP P G RKHP + I +DT++ILFI GGAF GLE+
Sbjct: 191 RDVSGEGVQQALLKILEGTIANVP-PQGG-RKHPYQEFIKVDTRNILFIAGGAFDGLEEI 248
Query: 310 ISERRQDSSIGFGAPVRAN--MRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPI 367
I R Q +++GFGA +++ MR G +L+ V DLV YGLIPEF+GRFP+
Sbjct: 249 IKRRIQSTTMGFGAEIKSKKEMRLG---------EILKHVTPDDLVQYGLIPEFVGRFPV 299
Query: 368 LVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGAR 427
+ +L L+ED LV++L EPKNA+ RQY+K+F ++ VKL TD+ALR+IAKKA+ + TGAR
Sbjct: 300 IATLDDLSEDDLVRILKEPKNAVVRQYQKLFEIDGVKLEVTDEALRIIAKKAIKRGTGAR 359
Query: 428 GLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
L+ + E ++ + MFE+P K +V V++ +E + P
Sbjct: 360 ALKNVFEEMMIDMMFELPNLK----NVEKVVITEEVALGKEKP 398
>gi|418055592|ref|ZP_12693646.1| ATP-dependent Clp protease ATP-binding subunit clpX [Hyphomicrobium
denitrificans 1NES1]
gi|353209870|gb|EHB75272.1| ATP-dependent Clp protease ATP-binding subunit clpX [Hyphomicrobium
denitrificans 1NES1]
Length = 415
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 198/389 (50%), Positives = 260/389 (66%), Gaps = 53/389 (13%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
N+N + +PTP+EIC LD +VIGQ AK+ AV+NHYK
Sbjct: 47 NKNTLVKSRDGVPTPQEICNVLDSYVIGQFHAKRV---------------LSVAVHNHYK 91
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
R+ H++ ND VEL KSN+LL+GPTGSGKTLLA
Sbjct: 92 RLNHATKN--------------------------ND--VELAKSNILLVGPTGSGKTLLA 123
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+TLARI++VPFT+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI
Sbjct: 124 QTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKI 183
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFIC
Sbjct: 184 SRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFIC 241
Query: 300 GGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIP 359
GGAF GLEK IS R + SSIGF A V TG D T +L V+ DL+ +GLIP
Sbjct: 242 GGAFAGLEKIISRRGKGSSIGFSAKV-----TG--PDERRTGDILRGVEPEDLLKFGLIP 294
Query: 360 EFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKA 419
EFIGR P++ +L L+E LVQ+L EPKNA+ +QY+++F M +VKL T DAL+ I++KA
Sbjct: 295 EFIGRLPVIATLEDLDEAALVQILTEPKNAIVKQYQRLFEMEDVKLTITLDALKAISRKA 354
Query: 420 MAKNTGARGLRALLENILTEAMFEIPETK 448
+ + TGARGLR+++E IL + M+++P K
Sbjct: 355 IERKTGARGLRSIMEGILLDTMYDLPTLK 383
>gi|289577855|ref|YP_003476482.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermoanaerobacter italicus Ab9]
gi|289527568|gb|ADD01920.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter italicus Ab9]
Length = 424
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 192/378 (50%), Positives = 255/378 (67%), Gaps = 53/378 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LP PKEI + LD++VIGQE+AKK+ AVYNHYKRI
Sbjct: 59 ELPKPKEIKEFLDQYVIGQEKAKKA---------------LAVAVYNHYKRI-------- 95
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N ++ D+ VEL+KSN+LL+GPTGSGKTLLA+TLA+++NVP
Sbjct: 96 -------------------NSRLKPDD-VELQKSNILLLGPTGSGKTLLAQTLAKLLNVP 135
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E A++GI+YIDE+DKI K+E+ +
Sbjct: 136 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAEKGIIYIDEIDKIARKSENPSIT 195
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ NVP P G RKHP + I IDT +ILFICGGAF GLEK
Sbjct: 196 RDVSGEGVQQALLKILEGTIANVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFEGLEKI 253
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R ++GFG+ V++ +L + DL+ +G+IPEFIGR PI+V
Sbjct: 254 IESRIGKKTLGFGSDVQSRKEKN-------IGEILSHIMPEDLLKFGMIPEFIGRVPIVV 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+++ LV++L EPKNAL +QY+K+F ++ VKL F AL LIA KA+ + TGARGL
Sbjct: 307 TLDPLDKEDLVRILTEPKNALVKQYEKLFELDGVKLEFDKKALNLIADKALERKTGARGL 366
Query: 430 RALLENILTEAMFEIPET 447
RA+LE I+ + M+EIP +
Sbjct: 367 RAILEEIMLDVMYEIPSS 384
>gi|392307872|ref|ZP_10270406.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudoalteromonas
citrea NCIMB 1889]
Length = 428
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 261/401 (65%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQE AKK AVYNHYKR+ +
Sbjct: 67 LPVPKEIRNHLDDYVIGQEHAKKV---------------LSVAVYNHYKRLKNQ------ 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G G+ VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 106 -------------GSAKGD--------VELSKSNILLIGPTGSGKTLLAETLARLLDVPF 144
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 145 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 204
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 205 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 262
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R +++ IGFGA V++ + L S + V+ DLV YGLIPEFIGR P++
Sbjct: 263 DQRSHKNAGIGFGAQVKSEDSSRSL------SETFKDVEPEDLVKYGLIPEFIGRLPVVA 316
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+ED L+Q+L EPKNAL +Q+ K+F M +V L F +DAL+ IA KAM + TGARGL
Sbjct: 317 TLTELDEDALIQILNEPKNALTKQFAKLFQMEDVDLEFREDALKAIAHKAMERKTGARGL 376
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E +L M+E+P +V+ V+VD+ + P
Sbjct: 377 RSIVEGVLLNTMYELP----SIDNVSKVVVDETVIKGESDP 413
>gi|163868072|ref|YP_001609276.1| ATP-dependent protease ATP-binding subunit ClpX [Bartonella
tribocorum CIP 105476]
gi|189082484|sp|A9ISA8.1|CLPX_BART1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|161017723|emb|CAK01281.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Bartonella
tribocorum CIP 105476]
Length = 424
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 193/375 (51%), Positives = 254/375 (67%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI LD++VIGQ+ AK+ AV+NHYKR+ H S
Sbjct: 65 VPTPQEIIAVLDDYVIGQQHAKRV---------------LSVAVHNHYKRLAHQS----- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KS ND +EL KSN+LL+GPTG GKT LA+TLARI++VPF
Sbjct: 105 ---------------KS------ND--IELAKSNILLVGPTGCGKTYLAQTLARIIDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI KA++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKADNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT +ILFICGGAF GLE+ I
Sbjct: 202 DVSGEGVQQALLKIMEGTIASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERII 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGF A V+A D + ++ DL+ +GLIPEFIGR PI+ +
Sbjct: 260 SGRGEKTSIGFSATVKA-------PDERCVGEIFRDLEPEDLIKFGLIPEFIGRLPIVAT 312
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ + L+Q+L +PKNAL +QY+++F M NV+L F +DALR IAKKA+ + TGARGLR
Sbjct: 313 LEDLDVNALMQILSQPKNALVKQYQRLFEMENVELAFHEDALRAIAKKAIERKTGARGLR 372
Query: 431 ALLENILTEAMFEIP 445
+++E IL E MFE+P
Sbjct: 373 SIMEKILLETMFELP 387
>gi|339494037|ref|YP_004714330.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri ATCC 17588 = LMG 11199]
gi|338801409|gb|AEJ05241.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri ATCC 17588 = LMG 11199]
Length = 426
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 257/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQERAKK IL AVYNHYKR+ ++E
Sbjct: 65 LPAPKEISGILDQYVIGQERAKK-----IL----------AVAVYNHYKRLNQRDKKEE- 108
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 109 ---------------------------VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFAGLEKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + +A L +V+ DLV +GLIPEF+GR P++ +
Sbjct: 260 QSRSTQGGIGFNAEVRSKDPGKKIGEA------LRAVEPDDLVKFGLIPEFVGRLPVIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F + V L F DAL+ +A +A+ + TGARGLR
Sbjct: 314 LDELDEAALIQILTEPKNALTKQYAKLFELEGVDLEFRPDALKAVAHRALERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP K V+ V++D+ + P
Sbjct: 374 SILEGVLLDTMYEIPSQK----DVSKVVIDESVIEGTSQP 409
>gi|15641923|ref|NP_231555.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|121727847|ref|ZP_01680914.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae V52]
gi|147674941|ref|YP_001217454.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio cholerae
O395]
gi|153217637|ref|ZP_01951318.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae 1587]
gi|227082051|ref|YP_002810602.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio cholerae
M66-2]
gi|227118369|ref|YP_002820265.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae O395]
gi|229507983|ref|ZP_04397488.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae BX 330286]
gi|229511780|ref|ZP_04401259.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae B33]
gi|229515307|ref|ZP_04404767.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae TMA 21]
gi|229518917|ref|ZP_04408360.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae RC9]
gi|229523941|ref|ZP_04413346.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae bv. albensis VL426]
gi|229529053|ref|ZP_04418443.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae 12129(1)]
gi|229607529|ref|YP_002878177.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio cholerae
MJ-1236]
gi|254286857|ref|ZP_04961809.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae AM-19226]
gi|254849009|ref|ZP_05238359.1| ATP-dependent protease ATP-binding subunit [Vibrio cholerae MO10]
gi|255745320|ref|ZP_05419269.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio cholera
CIRS 101]
gi|261210562|ref|ZP_05924855.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio sp.
RC341]
gi|262156044|ref|ZP_06029164.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae INDRE 91/1]
gi|262167883|ref|ZP_06035583.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae RC27]
gi|297579439|ref|ZP_06941367.1| ATP-dependent protease ATP-binding subunit [Vibrio cholerae RC385]
gi|298498041|ref|ZP_07007848.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae MAK 757]
gi|360035804|ref|YP_004937567.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae O1 str. 2010EL-1786]
gi|379741754|ref|YP_005333723.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio cholerae
IEC224]
gi|384424911|ref|YP_005634269.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae LMA3984-4]
gi|417813966|ref|ZP_12460619.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-49A2]
gi|417817703|ref|ZP_12464332.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HCUF01]
gi|417821274|ref|ZP_12467888.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE39]
gi|418334941|ref|ZP_12943855.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-06A1]
gi|418338558|ref|ZP_12947452.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-23A1]
gi|418346476|ref|ZP_12951238.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-28A1]
gi|418350238|ref|ZP_12954969.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-43A1]
gi|418355772|ref|ZP_12958491.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-61A1]
gi|419826900|ref|ZP_14350399.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1033(6)]
gi|421318200|ref|ZP_15768768.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1032(5)]
gi|421321693|ref|ZP_15772246.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1038(11)]
gi|421325492|ref|ZP_15776016.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1041(14)]
gi|421329154|ref|ZP_15779664.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1042(15)]
gi|421336650|ref|ZP_15787111.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1048(21)]
gi|421340081|ref|ZP_15790513.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-20A2]
gi|421348401|ref|ZP_15798778.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-46A1]
gi|421351662|ref|ZP_15802027.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE-25]
gi|421354595|ref|ZP_15804927.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE-45]
gi|422897028|ref|ZP_16934478.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-40A1]
gi|422903230|ref|ZP_16938206.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-48A1]
gi|422907114|ref|ZP_16941918.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-70A1]
gi|422909691|ref|ZP_16944334.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE-09]
gi|422913961|ref|ZP_16948467.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HFU-02]
gi|422923226|ref|ZP_16956384.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae BJG-01]
gi|422926167|ref|ZP_16959181.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-38A1]
gi|423145486|ref|ZP_17133080.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-19A1]
gi|423150162|ref|ZP_17137476.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-21A1]
gi|423153982|ref|ZP_17141163.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-22A1]
gi|423157066|ref|ZP_17144159.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-32A1]
gi|423160636|ref|ZP_17147576.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-33A2]
gi|423165456|ref|ZP_17152185.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-48B2]
gi|423731473|ref|ZP_17704776.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-17A1]
gi|423768487|ref|ZP_17712901.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-50A2]
gi|423895364|ref|ZP_17727111.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-62A1]
gi|423930802|ref|ZP_17731505.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-77A1]
gi|423956435|ref|ZP_17734989.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE-40]
gi|423985221|ref|ZP_17738538.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE-46]
gi|424002917|ref|ZP_17745992.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-17A2]
gi|424006706|ref|ZP_17749676.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-37A1]
gi|424024687|ref|ZP_17764338.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-62B1]
gi|424027572|ref|ZP_17767175.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-69A1]
gi|424586844|ref|ZP_18026423.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1030(3)]
gi|424591587|ref|ZP_18031014.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1037(10)]
gi|424595491|ref|ZP_18034812.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1040(13)]
gi|424599407|ref|ZP_18038588.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
Cholerae CP1044(17)]
gi|424602128|ref|ZP_18041270.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1047(20)]
gi|424607099|ref|ZP_18046043.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1050(23)]
gi|424610922|ref|ZP_18049761.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-39A1]
gi|424613735|ref|ZP_18052523.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-41A1]
gi|424617715|ref|ZP_18056387.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-42A1]
gi|424622494|ref|ZP_18061002.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-47A1]
gi|424645458|ref|ZP_18083194.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-56A2]
gi|424653227|ref|ZP_18090607.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-57A2]
gi|424657048|ref|ZP_18094333.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-81A2]
gi|424659630|ref|ZP_18096879.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE-16]
gi|429887949|ref|ZP_19369453.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae PS15]
gi|440710124|ref|ZP_20890775.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae 4260B]
gi|443504284|ref|ZP_21071242.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-64A1]
gi|443508182|ref|ZP_21074945.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-65A1]
gi|443512024|ref|ZP_21078662.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-67A1]
gi|443515582|ref|ZP_21082093.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-68A1]
gi|443519376|ref|ZP_21085772.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-71A1]
gi|443524266|ref|ZP_21090479.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-72A2]
gi|443531863|ref|ZP_21097877.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-7A1]
gi|443535660|ref|ZP_21101538.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-80A1]
gi|443539207|ref|ZP_21105061.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-81A1]
gi|449055649|ref|ZP_21734317.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae O1 str. Inaba G4222]
gi|21263486|sp|Q9KQS7.1|CLPX_VIBCH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|172047650|sp|A5F6Z1.1|CLPX_VIBC3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763872|sp|C3LNM5.1|CLPX_VIBCM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|9656457|gb|AAF95069.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae O1 biovar El Tor str. N16961]
gi|121629883|gb|EAX62297.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae V52]
gi|124113416|gb|EAY32236.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae 1587]
gi|146316824|gb|ABQ21363.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae O395]
gi|150423007|gb|EDN14956.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae AM-19226]
gi|227009939|gb|ACP06151.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae M66-2]
gi|227013819|gb|ACP10029.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae O395]
gi|229332827|gb|EEN98313.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae 12129(1)]
gi|229337522|gb|EEO02539.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae bv. albensis VL426]
gi|229343606|gb|EEO08581.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae RC9]
gi|229348012|gb|EEO12971.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae TMA 21]
gi|229351745|gb|EEO16686.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae B33]
gi|229355488|gb|EEO20409.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae BX 330286]
gi|229370184|gb|ACQ60607.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae MJ-1236]
gi|254844714|gb|EET23128.1| ATP-dependent protease ATP-binding subunit [Vibrio cholerae MO10]
gi|255737150|gb|EET92546.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio cholera
CIRS 101]
gi|260840347|gb|EEX66918.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio sp.
RC341]
gi|262023610|gb|EEY42311.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae RC27]
gi|262030222|gb|EEY48866.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae INDRE 91/1]
gi|297537033|gb|EFH75866.1| ATP-dependent protease ATP-binding subunit [Vibrio cholerae RC385]
gi|297542374|gb|EFH78424.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae MAK 757]
gi|327484464|gb|AEA78871.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae LMA3984-4]
gi|340036452|gb|EGQ97428.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-49A2]
gi|340037426|gb|EGQ98401.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HCUF01]
gi|340038905|gb|EGQ99879.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE39]
gi|341621321|gb|EGS47067.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-70A1]
gi|341621464|gb|EGS47209.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-48A1]
gi|341622389|gb|EGS48052.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-40A1]
gi|341634451|gb|EGS59209.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE-09]
gi|341637622|gb|EGS62300.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HFU-02]
gi|341644318|gb|EGS68543.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae BJG-01]
gi|341646373|gb|EGS70487.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-38A1]
gi|356417650|gb|EHH71265.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-06A1]
gi|356418522|gb|EHH72119.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-21A1]
gi|356423096|gb|EHH76557.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-19A1]
gi|356428542|gb|EHH81768.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-22A1]
gi|356430200|gb|EHH83409.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-23A1]
gi|356433555|gb|EHH86744.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-28A1]
gi|356439723|gb|EHH92688.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-32A1]
gi|356444734|gb|EHH97543.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-43A1]
gi|356445733|gb|EHH98535.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-33A2]
gi|356450977|gb|EHI03682.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-48B2]
gi|356452270|gb|EHI04949.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-61A1]
gi|356646958|gb|AET27013.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae O1 str. 2010EL-1786]
gi|378795264|gb|AFC58735.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio cholerae
IEC224]
gi|395916458|gb|EJH27288.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1032(5)]
gi|395917330|gb|EJH28158.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1041(14)]
gi|395918687|gb|EJH29511.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1038(11)]
gi|395927688|gb|EJH38451.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1042(15)]
gi|395931749|gb|EJH42493.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1048(21)]
gi|395939364|gb|EJH50046.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-20A2]
gi|395942980|gb|EJH53656.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-46A1]
gi|395952107|gb|EJH62721.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE-25]
gi|395953720|gb|EJH64333.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE-45]
gi|395958921|gb|EJH69376.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-56A2]
gi|395959526|gb|EJH69954.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-57A2]
gi|395962172|gb|EJH72473.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-42A1]
gi|395970883|gb|EJH80600.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-47A1]
gi|395973486|gb|EJH83045.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1030(3)]
gi|395975869|gb|EJH85343.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1047(20)]
gi|408007244|gb|EKG45337.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-39A1]
gi|408013144|gb|EKG50889.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-41A1]
gi|408031462|gb|EKG68084.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1037(10)]
gi|408032384|gb|EKG68970.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1040(13)]
gi|408041790|gb|EKG77884.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
Cholerae CP1044(17)]
gi|408043274|gb|EKG79280.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1050(23)]
gi|408051986|gb|EKG87052.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE-16]
gi|408053606|gb|EKG88611.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-81A2]
gi|408607690|gb|EKK81093.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1033(6)]
gi|408624095|gb|EKK97047.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-17A1]
gi|408633768|gb|EKL06069.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-50A2]
gi|408654234|gb|EKL25376.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-77A1]
gi|408655164|gb|EKL26289.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-62A1]
gi|408657608|gb|EKL28686.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE-40]
gi|408664452|gb|EKL35289.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE-46]
gi|408845314|gb|EKL85430.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-37A1]
gi|408846087|gb|EKL86199.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-17A2]
gi|408870421|gb|EKM09701.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-62B1]
gi|408878875|gb|EKM17868.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-69A1]
gi|429224948|gb|EKY31246.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae PS15]
gi|439974347|gb|ELP50524.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae 4260B]
gi|443431229|gb|ELS73781.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-64A1]
gi|443435124|gb|ELS81268.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-65A1]
gi|443439007|gb|ELS88722.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-67A1]
gi|443442992|gb|ELS96294.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-68A1]
gi|443446794|gb|ELT03450.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-71A1]
gi|443449600|gb|ELT09891.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-72A2]
gi|443457253|gb|ELT24650.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-7A1]
gi|443461200|gb|ELT32273.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-80A1]
gi|443465307|gb|ELT39967.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-81A1]
gi|448264688|gb|EMB01925.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae O1 str. Inaba G4222]
Length = 426
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 260/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP++I + LD++VIGQE AKK AVYNHYKR+
Sbjct: 65 LPTPRKIREHLDDYVIGQEHAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 ---------------RNGDTTSEG---VELGKSNILLIGPTGSGKTLLAETLARLLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI K+E+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKSENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR+ + L S L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVATGTGIGFGADVRSKDNSKTL------SELFTQVEPEDLVKYGLIPEFIGRLPVTA 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E L+Q+L EPKNAL +QY +F + NV L F +DAL+ IA KAM + TGARGL
Sbjct: 315 TLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAIAAKAMKRKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P + V+ V++D+ + AP
Sbjct: 375 RSILEAVLLETMYELPSME----EVSKVVIDESVINGESAP 411
>gi|410092111|ref|ZP_11288651.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
viridiflava UASWS0038]
gi|409760539|gb|EKN45672.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
viridiflava UASWS0038]
Length = 427
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ +ND+ VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKNDD-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSIMR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTRGGIGFNAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +A++A+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRTDALKSVARRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQSDVSKVVIDESVIDGSSKP 410
>gi|256823169|ref|YP_003147132.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Kangiella
koreensis DSM 16069]
gi|256796708|gb|ACV27364.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Kangiella
koreensis DSM 16069]
Length = 422
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 197/399 (49%), Positives = 261/399 (65%), Gaps = 50/399 (12%)
Query: 67 EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSS 126
E LP P+EI + L+++VIGQ+RAKK AVYNHYKR+
Sbjct: 57 ESRSHLPKPQEIAEFLEQYVIGQDRAKKV---------------LSVAVYNHYKRLESEP 101
Query: 127 LQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARI 186
S+H + VEL KSN+LL+GPTGSGKTLLA+TLAR+
Sbjct: 102 AS----SEH---------------------KDVELGKSNILLIGPTGSGKTLLAETLARM 136
Query: 187 VNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAES 245
+ VPFT+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++
Sbjct: 137 LEVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDN 196
Query: 246 RNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVG 305
+ RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILF+CGGAF G
Sbjct: 197 PSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTGNILFVCGGAFAG 254
Query: 306 LEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRF 365
LEK I ER + IGFGA V+ + + +L++V+ DLV +GLIPEFIGR
Sbjct: 255 LEKIIQERTEKGGIGFGADVKQ------VKEGRAIGEMLKAVEPDDLVKFGLIPEFIGRL 308
Query: 366 PILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTG 425
PI+ +L L+E+ LV++L+EPKNAL +QY K+FS+ NV L F DAL IA KAM + TG
Sbjct: 309 PIVTTLQELDEEALVRILIEPKNALTKQYSKLFSLENVDLEFRKDALVAIAHKAMQRRTG 368
Query: 426 ARGLRALLENILTEAMFEIPETK-IGTSSVNAVLVDKEA 463
ARGLR++LE IL + M+ +P + + ++A +V EA
Sbjct: 369 ARGLRSILEEILLDTMYNLPSLEGVSKVCIDAAVVKGEA 407
>gi|386020702|ref|YP_005938726.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri DSM 4166]
gi|327480674|gb|AEA83984.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri DSM 4166]
Length = 426
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 257/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQERAKK IL AVYNHYKR+ ++E
Sbjct: 65 LPAPKEISGILDQYVIGQERAKK-----IL----------AVAVYNHYKRLNQRDKKEE- 108
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 109 ---------------------------VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFAGLEKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + +A L +V+ DLV +GLIPEF+GR P++ +
Sbjct: 260 QSRSTQGGIGFNAEVRSKDPGKKIGEA------LRAVEPDDLVKFGLIPEFVGRLPVIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F + V L F DAL+ +A +A+ + TGARGLR
Sbjct: 314 LDELDEAALIQILTEPKNALTKQYAKLFELEGVDLEFRPDALKAVAHRALERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP K V+ V++D+ + P
Sbjct: 374 SILEGVLLDTMYEIPSQK----DVSKVVIDESVIEGTSQP 409
>gi|153831438|ref|ZP_01984105.1| ATP-dependent Clp protease, ATP-binding subunit ClpX, partial
[Vibrio cholerae 623-39]
gi|148873080|gb|EDL71215.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae 623-39]
Length = 391
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 260/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP++I + LD++VIGQE AKK AVYNHYKR+
Sbjct: 30 LPTPRKIREHLDDYVIGQEHAKKV---------------LAVAVYNHYKRL--------- 65
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 66 ---------------RNGDTTSEG---VELGKSNILLIGPTGSGKTLLAETLARLLDVPF 107
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI K+E+ + R
Sbjct: 108 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKSENPSITR 167
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 168 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 225
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR+ + L S L V+ DLV YGLIPEFIGR P+
Sbjct: 226 EQRVATGTGIGFGADVRSKDNSKTL------SELFTQVEPEDLVKYGLIPEFIGRLPVTA 279
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E L+Q+L EPKNAL +QY +F + NV L F +DAL+ IA KAM + TGARGL
Sbjct: 280 TLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAIAAKAMKRKTGARGL 339
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P + V+ V++D+ + AP
Sbjct: 340 RSILEAVLLETMYELPSME----EVSKVVIDESVINGESAP 376
>gi|229521843|ref|ZP_04411260.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae TM 11079-80]
gi|417825142|ref|ZP_12471730.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE48]
gi|419830396|ref|ZP_14353881.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-1A2]
gi|419834075|ref|ZP_14357530.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-61A2]
gi|419837651|ref|ZP_14361089.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-46B1]
gi|421343856|ref|ZP_15794259.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-43B1]
gi|422917777|ref|ZP_16952095.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-02A1]
gi|423735603|ref|ZP_17708800.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-41B1]
gi|423822682|ref|ZP_17716692.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-55C2]
gi|423856423|ref|ZP_17720499.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-59A1]
gi|423882949|ref|ZP_17724086.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-60A1]
gi|423998207|ref|ZP_17741459.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-02C1]
gi|424009943|ref|ZP_17752880.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-44C1]
gi|424017100|ref|ZP_17756929.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-55B2]
gi|424020025|ref|ZP_17759811.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-59B1]
gi|424625393|ref|ZP_18063854.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-50A1]
gi|424629879|ref|ZP_18068166.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-51A1]
gi|424633922|ref|ZP_18072022.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-52A1]
gi|424637004|ref|ZP_18075012.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-55A1]
gi|424640913|ref|ZP_18078796.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-56A1]
gi|424648981|ref|ZP_18086644.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-57A1]
gi|443527900|ref|ZP_21093949.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-78A1]
gi|229340768|gb|EEO05773.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
cholerae TM 11079-80]
gi|340046627|gb|EGR07557.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HE48]
gi|341636659|gb|EGS61353.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-02A1]
gi|395939936|gb|EJH50617.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-43B1]
gi|408012535|gb|EKG50312.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-50A1]
gi|408018227|gb|EKG55686.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-52A1]
gi|408023466|gb|EKG60629.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-56A1]
gi|408024054|gb|EKG61190.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-55A1]
gi|408032930|gb|EKG69499.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-57A1]
gi|408055232|gb|EKG90171.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-51A1]
gi|408620169|gb|EKK93181.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-1A2]
gi|408629786|gb|EKL02455.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-41B1]
gi|408634658|gb|EKL06893.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-55C2]
gi|408640711|gb|EKL12497.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-59A1]
gi|408641073|gb|EKL12854.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-60A1]
gi|408648897|gb|EKL20214.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-61A2]
gi|408852562|gb|EKL92384.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-02C1]
gi|408856199|gb|EKL95894.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-46B1]
gi|408860003|gb|EKL99657.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-55B2]
gi|408863738|gb|EKM03212.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-44C1]
gi|408867119|gb|EKM06481.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-59B1]
gi|443453772|gb|ELT17590.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HC-78A1]
Length = 426
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 260/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP++I + LD++VIGQE AKK AVYNHYKR+
Sbjct: 65 LPTPRKIREHLDDYVIGQEHAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 ---------------RNGDTTSEG---VELGKSNILLIGPTGSGKTLLAETLARLLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI K+E+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKSENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR+ + L S L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVATGTGIGFGADVRSKDNSKTL------SELFTQVEPEDLVKYGLIPEFIGRLPVTA 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E L+Q+L EPKNAL +QY +F + NV L F +DAL+ IA KAM + TGARGL
Sbjct: 315 TLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAIAAKAMKRKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P + V+ V++D+ + AP
Sbjct: 375 RSILEAVLLETMYELPSME----EVSKVVIDESVINGESAP 411
>gi|197117661|ref|YP_002138088.1| ATP-dependent protease ATP-binding subunit ClpX [Geobacter
bemidjiensis Bem]
gi|253701608|ref|YP_003022797.1| ATP-dependent protease ATP-binding subunit ClpX [Geobacter sp. M21]
gi|238690892|sp|B5EI28.1|CLPX_GEOBB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|259491260|sp|C6E2S9.1|CLPX_GEOSM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|197087021|gb|ACH38292.1| ATP-dependent chaperone and Clp protease specificity component ClpX
[Geobacter bemidjiensis Bem]
gi|251776458|gb|ACT19039.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Geobacter sp.
M21]
Length = 417
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 194/400 (48%), Positives = 261/400 (65%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P+EI + LDE+VIGQ RAKK AVYNHYKR+
Sbjct: 63 LPKPQEIKEVLDEYVIGQSRAKKV---------------LAVAVYNHYKRVE-------- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ VK G+ VE++KSN+LL+GPTGSGKTLLA+TLARI+ VPF
Sbjct: 100 ------------AAVKPGD--------VEMQKSNILLLGPTGSGKTLLAQTLARILKVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ LL A+D+DVE AQ+GI+YIDE+DKI K++S + R
Sbjct: 140 AMADATNLTEAGYVGEDVENIILTLLQASDYDVEKAQKGIIYIDEIDKIARKSDSPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +V P G RKHP+ + + +DT +ILFICGGAF GL+ I
Sbjct: 200 DVSGEGVQQALLKIIEGTVASV--PPKGGRKHPQQEFLKVDTTNILFICGGAFPGLDSII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R ++GFGA V+ + LL V DL+ +G IPEF+GR P+L S
Sbjct: 258 QQRIGVKTLGFGADVKKKVEKKA-------GELLAGVTPEDLLKFGFIPEFVGRLPMLAS 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
LS L+E+ +VQ+L EPKNAL +QY+K+F M +VKL FTD +L IA++A+ + TGARGLR
Sbjct: 311 LSELDEEAMVQILKEPKNALIKQYQKLFDMEHVKLKFTDGSLVAIAREALKRKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LEN + + M+EIP S V V++++E + S + P
Sbjct: 371 SILENAMLDIMYEIP----SQSMVKEVVINEEVIYSKEKP 406
>gi|15642920|ref|NP_227961.1| ATP-dependent protease ATP-binding subunit ClpX [Thermotoga
maritima MSB8]
gi|418046082|ref|ZP_12684176.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermotoga
maritima MSB8]
gi|8134367|sp|Q9WXZ3.1|CLPX_THEMA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|4980639|gb|AAD35239.1|AE001700_3 ATP-dependent Clp protease, ATPase subunit clpX [Thermotoga
maritima MSB8]
gi|351675635|gb|EHA58795.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermotoga
maritima MSB8]
Length = 406
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 198/403 (49%), Positives = 264/403 (65%), Gaps = 61/403 (15%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
++PTP EI LD+++IGQERAKK AVYNHYKR++ +
Sbjct: 54 EIPTPAEIKAELDKYIIGQERAKKV---------------LSVAVYNHYKRVFSN----- 93
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+DS ND VE+EKSNVLL+GPTG+GKT LA+ LA+I+NVP
Sbjct: 94 -------LDS--------------ND--VEIEKSNVLLIGPTGTGKTYLARILAKILNVP 130
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNN-G 249
F I DAT LT+AGYVGED E+V+ +LL AA+FDVE AQ GI+YIDE+DKI K +
Sbjct: 131 FAIADATPLTEAGYVGEDVENVVLRLLEAANFDVERAQYGIIYIDEIDKIAKKSPNPSIT 190
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ NVP P G RKHP + I +DT++ILFI GGAF GLE+
Sbjct: 191 RDVSGEGVQQALLKILEGTIANVP-PQGG-RKHPYQEFIKVDTRNILFIAGGAFDGLEEI 248
Query: 310 ISERRQDSSIGFGAPVRAN--MRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPI 367
I R Q +++GFGA +++ MR G +L+ V DLV YGLIPEF+GRFP+
Sbjct: 249 IKRRIQSTTMGFGAEIKSKKEMRLG---------EILKHVTPDDLVQYGLIPEFVGRFPV 299
Query: 368 LVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGAR 427
+ +L L+ED LV++L EPKNA+ RQY+K+F ++ VKL TD+ALR+IA+KA+ + TGAR
Sbjct: 300 IATLDDLSEDDLVRILKEPKNAVVRQYQKLFEIDGVKLEVTDEALRIIARKALKRGTGAR 359
Query: 428 GLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
L+ + E ++ + MFE+P K +V V++ +E + P
Sbjct: 360 ALKNVFEEMMIDMMFELPNLK----NVEKVVITEEVALGKEKP 398
>gi|258516486|ref|YP_003192708.1| ATP-dependent protease ATP-binding subunit ClpX [Desulfotomaculum
acetoxidans DSM 771]
gi|257780191|gb|ACV64085.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Desulfotomaculum acetoxidans DSM 771]
Length = 416
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 192/376 (51%), Positives = 257/376 (68%), Gaps = 53/376 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI + LD++VIGQE AKK+ AVYNHYKRI
Sbjct: 57 DVPKPKEIKEILDQYVIGQESAKKA---------------LAVAVYNHYKRIN------- 94
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
LG + VEL+KSN++++GPTGSGKTLLA+TLAR++NVP
Sbjct: 95 -----------LGGKIDD----------VELQKSNIVMLGPTGSGKTLLAQTLARLLNVP 133
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A++GIVYIDE+DKI K+E+ +
Sbjct: 134 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSIT 193
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I +DT ++LFICGGAF G++K
Sbjct: 194 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQLDTTNVLFICGGAFDGIDKI 251
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R S+GFGA ++A MR + +L ++ DL+ YGLIPEF+GR P++V
Sbjct: 252 IQNRTGKKSMGFGAEIKA-MREQRI------GEILSNILPEDLLKYGLIPEFVGRLPVIV 304
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+ED LV++L EP+NAL +QY+K+F ++ V + F DAL+ IAK+A+ +NTGARGL
Sbjct: 305 TLDMLDEDALVRILTEPRNALIKQYEKLFELDGVAIEFQADALKCIAKEALRRNTGARGL 364
Query: 430 RALLENILTEAMFEIP 445
RA+LE+++ M+EIP
Sbjct: 365 RAILEDVMLNIMYEIP 380
>gi|418293282|ref|ZP_12905195.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
gi|379064678|gb|EHY77421.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
Length = 426
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 257/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQERAKK IL AVYNHYKR+ ++E
Sbjct: 65 LPAPKEISGILDQYVIGQERAKK-----IL----------AVAVYNHYKRLNQRDKKEE- 108
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 109 ---------------------------VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFAGLEKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + +A L +V+ DLV +GLIPEF+GR P++ +
Sbjct: 260 QGRSTQGGIGFNAEVRSKDPGKKIGEA------LRAVEPDDLVKFGLIPEFVGRLPVIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F + V L F DAL+ +A +A+ + TGARGLR
Sbjct: 314 LDELDEAALIQILTEPKNALTKQYAKLFELEGVDLEFRSDALKAVASRALERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP K V+ V++D+ + P
Sbjct: 374 SILEGVLLDTMYEIPSQK----DVSKVVIDESVIEGTSQP 409
>gi|341616022|ref|ZP_08702891.1| ATP-dependent protease ATP-binding subunit ClpX [Citromicrobium sp.
JLT1363]
Length = 422
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 201/428 (46%), Positives = 272/428 (63%), Gaps = 63/428 (14%)
Query: 56 ETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAV 115
ET+ G R EG + P+P EIC L+++VIGQERAK+ AV
Sbjct: 51 ETKAGLTGRK-EGEV--PSPSEICATLNDYVIGQERAKRV---------------LSVAV 92
Query: 116 YNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSG 175
+NHYKR+ H+ Q + VEL KSN+LL+GPTGSG
Sbjct: 93 HNHYKRLKHAGKQGD----------------------------VELAKSNILLVGPTGSG 124
Query: 176 KTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYID 235
KTLLA+TLAR +VPFT+ DAT LT+AGYVGED E+++ KLL A+D++VE AQ GIVYID
Sbjct: 125 KTLLAQTLARTFDVPFTMADATTLTEAGYVGEDVENIILKLLQASDYNVEKAQHGIVYID 184
Query: 236 EVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKD 294
E+DKI KAE+ + RDVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT +
Sbjct: 185 EIDKITRKAENPSITRDVSGEGVQQALLKLMEGTTASVP-PQGG-RKHPQQEFLQVDTTN 242
Query: 295 ILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVA 354
ILFICGGAF GL+K I++R Q SIGFGA V D LLE + DL+
Sbjct: 243 ILFICGGAFAGLDKIIADRLQKRSIGFGAHVAD-------PDKRRIGELLEKSEPEDLLK 295
Query: 355 YGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRL 414
+GLIPEF+GR P++ SL L+ D LV +L EPKNA+ +QY K+F + V+L F DDALR
Sbjct: 296 FGLIPEFVGRLPVIASLHDLDVDALVTILQEPKNAIVKQYAKLFELEGVELTFNDDALRA 355
Query: 415 IAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGA 474
IA++A+ + TGARGLR+++E +L + M+++P+ + N V++DK+ V P
Sbjct: 356 IAERAIKRKTGARGLRSIVEGLLLDTMYDLPDLE----GCNEVVIDKDVVEGRKEP---I 408
Query: 475 KILHGDGE 482
++ G+G+
Sbjct: 409 RVFDGEGK 416
>gi|61657345|emb|CAI44263.1| ATP-dependent Clp protease, ATPase subunit [Thermotoga naphthophila
RKU-10]
Length = 413
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 198/403 (49%), Positives = 264/403 (65%), Gaps = 61/403 (15%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
++PTP EI LD+++IGQERAKK AVYNHYKR++ +
Sbjct: 61 EIPTPAEIKAELDKYIIGQERAKKV---------------LSVAVYNHYKRVFSN----- 100
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+DS ND VE+EKSNVLL+GPTG+GKT LA+ LA+I+NVP
Sbjct: 101 -------LDS--------------ND--VEIEKSNVLLIGPTGTGKTYLARILAKILNVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNN-G 249
F I DAT LT+AGYVGED E+V+ +LL AA+FD+E AQ GI+YIDE+DKI K +
Sbjct: 138 FAIADATPLTEAGYVGEDVENVVLRLLEAANFDIERAQYGIIYIDEIDKIAKKSPNPSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ NVP P G RKHP + I +DT++ILFI GGAF GLE+
Sbjct: 198 RDVSGEGVQQALLKILEGTIANVP-PQGG-RKHPYQEFIKVDTRNILFIAGGAFDGLEEI 255
Query: 310 ISERRQDSSIGFGAPVRAN--MRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPI 367
I R Q +++GFGA +++ MR G +L+ V DLV YGLIPEF+GRFP+
Sbjct: 256 IKRRIQSTTMGFGAEIKSKKEMRLG---------EILKHVTPDDLVQYGLIPEFVGRFPV 306
Query: 368 LVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGAR 427
+ +L L+ED LV++L EPKNA+ RQY+K+F ++ VKL TD+ALR+IAKKA+ + TGAR
Sbjct: 307 IATLDDLSEDDLVRILKEPKNAVVRQYQKLFEIDGVKLEVTDEALRIIAKKAIKRGTGAR 366
Query: 428 GLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
L+ + E ++ + MFE+P K +V V++ +E + P
Sbjct: 367 ALKNVFEEMMIDMMFELPNLK----NVEKVVITEEVALGKEKP 405
>gi|375111158|ref|ZP_09757369.1| ATP-dependent protease ATP-binding subunit ClpX [Alishewanella
jeotgali KCTC 22429]
gi|374568700|gb|EHR39872.1| ATP-dependent protease ATP-binding subunit ClpX [Alishewanella
jeotgali KCTC 22429]
Length = 426
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 196/417 (47%), Positives = 271/417 (64%), Gaps = 60/417 (14%)
Query: 56 ETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAV 115
E ++ + R++E LPTP+EI K LD++VIGQE AKK AV
Sbjct: 53 EIKDISPKRDTE---KLPTPREIRKHLDDYVIGQEHAKKV---------------LAVAV 94
Query: 116 YNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSG 175
YNHYKR+ +++ + VEL KSN+LL+GPTGSG
Sbjct: 95 YNHYKRLR----------------------------SIQQKQDVELGKSNILLIGPTGSG 126
Query: 176 KTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYID 235
KTLLA+TLAR+++VPFT+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYID
Sbjct: 127 KTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYID 186
Query: 236 EVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKD 294
E+DKI K+++ + RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT
Sbjct: 187 EIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTSK 244
Query: 295 ILFICGGAFVGLEKTISERR-QDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLV 353
ILFICGGAF GL+K I +R + S IGFGA V++ + LT++ V+ DLV
Sbjct: 245 ILFICGGAFAGLDKVIEQRMAKGSGIGFGAEVKSKESSRSLTES------FRDVEPEDLV 298
Query: 354 AYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALR 413
YGLIPEFIGR P++ +L+ L+ D L+Q+L +PKNAL +Q+ +F+M V L F DDAL+
Sbjct: 299 KYGLIPEFIGRLPVVATLTELDLDALMQILSQPKNALIKQFAALFAMEEVDLEFRDDALK 358
Query: 414 LIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
IA+KAM + TGARGLR+++E +L + M+E+P + V+ V++D+ + P
Sbjct: 359 AIAQKAMDRKTGARGLRSIVEGVLLDTMYELPSMQ----DVSKVVIDETVIRGESQP 411
>gi|149201012|ref|ZP_01877987.1| ATP-dependent protease ATP-binding subunit [Roseovarius sp. TM1035]
gi|149145345|gb|EDM33371.1| ATP-dependent protease ATP-binding subunit [Roseovarius sp. TM1035]
Length = 422
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 196/411 (47%), Positives = 272/411 (66%), Gaps = 69/411 (16%)
Query: 36 EIMGGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKS 95
E+ IR++ ++ GI+S SEG +P P++ICK LD++VIGQ RAKK
Sbjct: 42 ELCMDIIREETKTAGIKS------------SEG---IPAPRDICKVLDDYVIGQARAKKV 86
Query: 96 HIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEN 155
AV+NHYKR+ +S SD
Sbjct: 87 ---------------LSVAVHNHYKRLNNSG-----KSD--------------------- 105
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
+EL KSN+LL+GPTG GKTLLA+TLARI++VPFT+ DAT LT+AGYVGED E+++ K
Sbjct: 106 ---IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILK 162
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
LL +++++VE AQRGIVYIDEVDKI K+E+ + RDVSGEGVQQALLK++EGTV VP
Sbjct: 163 LLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVAAVP- 221
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
P G RKHP+ + + +DT +ILFICGGAF GL+K I++R + S++GFGA VR N
Sbjct: 222 PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRDN------ 274
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
DA + ++ DL+ +GLIPEF+GR P++ +L L+E+ LV +L +PKNAL +QY
Sbjct: 275 -DARGVGEIFTDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALVTILTQPKNALVKQY 333
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP 445
+++F + +L FT+DAL+ +AK+A+A+ TGARGLR++LE+IL + MFE+P
Sbjct: 334 QRLFELEGAQLSFTEDALKAVAKRAIARKTGARGLRSILEDILLDTMFELP 384
>gi|431927411|ref|YP_007240445.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
stutzeri RCH2]
gi|431825698|gb|AGA86815.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
stutzeri RCH2]
Length = 426
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 257/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQERAKK IL AVYNHYKR+ ++E
Sbjct: 65 LPAPKEISGILDQYVIGQERAKK-----IL----------AVAVYNHYKRLNQRDKKEE- 108
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 109 ---------------------------VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFAGLEKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + +A L +V+ DLV +GLIPEF+GR P++ +
Sbjct: 260 QGRSTQGGIGFNAEVRSKDPGKKIGEA------LRAVEPDDLVKFGLIPEFVGRLPVIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F + V L F DAL+ IA +A+ + TGARGLR
Sbjct: 314 LDELDEAALIQILTEPKNALTKQYAKLFELEGVDLEFRPDALKAIASRALERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP K V+ V++D+ + P
Sbjct: 374 SILEGVLLDTMYEIPSQK----DVSKVVIDESVIEGTSQP 409
>gi|427405939|ref|ZP_18896144.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Selenomonas
sp. F0473]
gi|425708780|gb|EKU71819.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Selenomonas
sp. F0473]
Length = 421
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 259/401 (64%), Gaps = 56/401 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI + LD++VIGQ+ AKKS AVYNHYKRI
Sbjct: 60 DVPKPKEIRRILDQYVIGQDEAKKS---------------LSVAVYNHYKRIN------- 97
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+G G E VEL KSN+L++GPTGSGKTLLA+TLARI+NVP
Sbjct: 98 -----------MGQG---------KGEDVELRKSNILMIGPTGSGKTLLAQTLARILNVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E AQRGI+YIDE+DKI K+E+ +
Sbjct: 138 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAQRGIIYIDEIDKIARKSENPSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT +VP P G RKHP+ + + IDT +ILFICGGAF G+E+
Sbjct: 198 RDVSGEGVQQALLKILEGTTASVP-PQGG-RKHPQQELLQIDTTNILFICGGAFDGIEEI 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R +GFGA VR+ R L V DL+ GLIPEFIGR P++V
Sbjct: 256 IESRLGKKQMGFGAEVRSKKRVS-------VGESLSKVIPEDLMKNGLIPEFIGRLPVVV 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+LS+L+E +V++L EPKNAL +Q++K+ ++ V+L F DDAL LIAK+A+ TGARGL
Sbjct: 309 TLSSLDEAAMVRILTEPKNALVKQFQKLLELDGVRLTFEDDALHLIAKEALTHKTGARGL 368
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA++E ++ M+E+P + V A V K+ + + P
Sbjct: 369 RAIIEGLMRNVMYEVPSIQ----GVTACQVTKDVIANRSDP 405
>gi|254455799|ref|ZP_05069228.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Candidatus
Pelagibacter sp. HTCC7211]
gi|207082801|gb|EDZ60227.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Candidatus
Pelagibacter sp. HTCC7211]
Length = 422
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 193/400 (48%), Positives = 266/400 (66%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEIC LD++VIGQ AKK AV+NHYKR+ + +
Sbjct: 59 LPSPKEICSVLDDYVIGQPHAKKV---------------LSVAVHNHYKRLNYEN----- 98
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ + VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 99 ----------------------KTSKNVELAKSNILLVGPTGCGKTLLAQTLARILDVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDEVDKI K+E+ + R
Sbjct: 137 TMADATTLTEAGYVGEDVENIILKLLQASDYNVEKAQRGIVYIDEVDKISRKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 197 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S+R + +SIGFGA V+ T T +++++ DL+ +GLIPEFIGR P++ +
Sbjct: 255 SQRDKGTSIGFGADVKN-------TQDKKTGEWMKTLEPEDLLKFGLIPEFIGRLPMIAT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+++L EPKN+L +QY+++F ++ KL F ++AL+ IA+KA++K TGARGLR
Sbjct: 308 LEDLDEKSLIKILQEPKNSLTKQYQELFKLDGAKLTFKENALKEIAQKAISKKTGARGLR 367
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LENIL + M+++P +V V+VD A P
Sbjct: 368 SILENILLKTMYDLP----SQDNVEEVIVDAGAARGQSQP 403
>gi|294083693|ref|YP_003550450.1| ATP-dependent protease Clp [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663265|gb|ADE38366.1| ATP-dependent protease Clp [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 420
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 192/377 (50%), Positives = 258/377 (68%), Gaps = 53/377 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP +I LD +VIGQ RAK+ AV+NHYKR+ ++
Sbjct: 62 VPTPADILAVLDGYVIGQSRAKRV---------------LSVAVHNHYKRLANAG----- 101
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ VE+ KSN+LL+GPTG GKTLLA+TLAR+++VPF
Sbjct: 102 ---------------RTGD--------VEISKSNILLVGPTGCGKTLLAQTLARMLDVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI KA++ + R
Sbjct: 139 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKADNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 199 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKLI 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+ R + IGFGA VR D LL S++ DL+ +GLIPEF+GR P++ +
Sbjct: 257 AGRDTGAGIGFGADVRD-------PDDRKIGELLGSLEPEDLIKFGLIPEFVGRLPVIAT 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ LV++L EPKNAL +QY+K+F M++V+L F DDALR +A+KA+A+ TGARGLR
Sbjct: 310 LEDLDEEALVRILTEPKNALVKQYEKLFEMDDVRLEFRDDALRAVAQKAIARKTGARGLR 369
Query: 431 ALLENILTEAMFEIPET 447
+++ENIL E MF+IP +
Sbjct: 370 SIMENILMEPMFDIPTS 386
>gi|448824025|ref|YP_007417193.1| ATP-dependent Clp protease, ATP-binding subunit [Corynebacterium
urealyticum DSM 7111]
gi|448277522|gb|AGE36946.1| ATP-dependent Clp protease, ATP-binding subunit [Corynebacterium
urealyticum DSM 7111]
Length = 424
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 206/429 (48%), Positives = 267/429 (62%), Gaps = 66/429 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQ+ AK++ AVYNHYKRI
Sbjct: 59 LPTPSEISAFLDKYVIGQDDAKRT---------------LAVAVYNHYKRIQ-------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVE-NDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
V+ N ND+ VEL KSN+L++GPTGSGKT LA++LAR+++VP
Sbjct: 96 --------------VEEANALARRNDDEVELSKSNILMLGPTGSGKTYLAQSLARMLDVP 141
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI-VKAESRNNG 249
F I DAT+LT+AGYVGED E++L KLL +ADFDVE AQRGI+YIDEVDKI K+E+ +
Sbjct: 142 FAIADATSLTEAGYVGEDVENILLKLLQSADFDVEKAQRGIIYIDEVDKIGRKSENPSIT 201
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV VP P G RKHP + I DTK++LFI GAF GLEK
Sbjct: 202 RDVSGEGVQQALLKILEGTVAAVP-PQGG-RKHPNQEFIQFDTKNVLFIVAGAFAGLEKV 259
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I +RR +GFGA V + + + D + V+ DLV +GLIPE IGR P++
Sbjct: 260 IEDRRGKKGLGFGAEVTS--KNDQVKDP------FQYVEPEDLVKFGLIPEVIGRLPVVT 311
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+ L+ED LVQVL EPKNAL RQY+++F M+NV+L F D ALR +A++A+A+ TGARGL
Sbjct: 312 HVGHLDEDALVQVLTEPKNALVRQYQRLFEMDNVQLAFEDGALREVARQALARETGARGL 371
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHE 489
R+++E IL M+ IPE + + VL+ + A GD E R+ HE
Sbjct: 372 RSIMERILLPIMYSIPEEE----DIAEVLITEAAA-------------KGDAEPTRLTHE 414
Query: 490 TKSAHENDS 498
+ + S
Sbjct: 415 EVAERDKRS 423
>gi|397169841|ref|ZP_10493268.1| ATP-dependent protease ATP-binding subunit ClpX [Alishewanella
aestuarii B11]
gi|396088369|gb|EJI85952.1| ATP-dependent protease ATP-binding subunit ClpX [Alishewanella
aestuarii B11]
Length = 426
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 196/417 (47%), Positives = 271/417 (64%), Gaps = 60/417 (14%)
Query: 56 ETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAV 115
E ++ + R++E LPTP+EI K LD++VIGQE AKK AV
Sbjct: 53 EIKDISPKRDTE---KLPTPREIRKHLDDYVIGQEHAKKV---------------LAVAV 94
Query: 116 YNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSG 175
YNHYKR+ +++ + VEL KSN+LL+GPTGSG
Sbjct: 95 YNHYKRLR----------------------------SIQQKQDVELGKSNILLIGPTGSG 126
Query: 176 KTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYID 235
KTLLA+TLAR+++VPFT+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYID
Sbjct: 127 KTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYID 186
Query: 236 EVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKD 294
E+DKI K+++ + RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT
Sbjct: 187 EIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTSK 244
Query: 295 ILFICGGAFVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLV 353
ILFICGGAF GL+K I +R + S IGFGA V++ + LT++ V+ DLV
Sbjct: 245 ILFICGGAFAGLDKVIEQRLAKGSGIGFGAEVKSKESSRSLTES------FRDVEPEDLV 298
Query: 354 AYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALR 413
YGLIPEFIGR P++ +L+ L+ D L+Q+L +PKNAL +Q+ +F+M V L F DDAL+
Sbjct: 299 KYGLIPEFIGRLPVVATLTELDLDALMQILSQPKNALIKQFAALFAMEEVDLEFRDDALK 358
Query: 414 LIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
IA+KAM + TGARGLR+++E +L + M+E+P + V+ V++D+ + P
Sbjct: 359 AIAQKAMDRKTGARGLRSIVEGVLLDTMYELPSMQ----DVSKVVIDETVIRGESQP 411
>gi|167627760|ref|YP_001678260.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|167597761|gb|ABZ87759.1| ATP-dependent Clp protease subunit X [Francisella philomiragia
subsp. philomiragia ATCC 25017]
Length = 417
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 192/377 (50%), Positives = 242/377 (64%), Gaps = 51/377 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI K LD+++IGQ+ KK AVYNHYKRI
Sbjct: 56 LPKPIEIKKYLDDYIIGQDNPKKV---------------LSVAVYNHYKRI--------- 91
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N D+ EL+KSNVLL+GPTGSGKTL A+TLA+++NVPF
Sbjct: 92 ------------------TSNTTKDDDTELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPF 133
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVG+D E+++ +LL ADFDV AQ+GI+YIDE+DKI K+ES + R
Sbjct: 134 AIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKSESASITR 193
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +V P G RKHP D I +DT DILFICGGAF G+EK +
Sbjct: 194 DVSGEGVQQALLKLIEGTVSSV--PPKGGRKHPNQDMIQVDTSDILFICGGAFAGIEKVV 251
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R SIGF A V ++L T L++ V+S DL +GLIPE IGR PI+
Sbjct: 252 KHRMDKVSIGFNADVIQQ------KNSLDTEKLMQKVESEDLTRFGLIPELIGRLPIVTV 305
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L E+ LV++L EPKNAL +QY K+F ++V + F+D AL IAKKA+AK TGARGLR
Sbjct: 306 LNELKEEDLVKILTEPKNALIKQYVKLFKFDDVAIEFSDQALVEIAKKAIAKKTGARGLR 365
Query: 431 ALLENILTEAMFEIPET 447
+LEN+L E MF +P +
Sbjct: 366 TILENVLLEVMFHVPSS 382
>gi|296284616|ref|ZP_06862614.1| ATP-dependent protease ATP-binding subunit ClpX [Citromicrobium
bathyomarinum JL354]
Length = 421
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 202/427 (47%), Positives = 270/427 (63%), Gaps = 63/427 (14%)
Query: 56 ETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAV 115
ET+ G R EG + PTP EIC L+++VIGQERAK+ AV
Sbjct: 48 ETKAGLTGRK-EGEV--PTPSEICATLNDYVIGQERAKRV---------------LSVAV 89
Query: 116 YNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSG 175
+NHYKR+ H+ Q + VEL KSN+LL+GPTGSG
Sbjct: 90 HNHYKRLKHAGKQGD----------------------------VELAKSNILLVGPTGSG 121
Query: 176 KTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYID 235
KTLLA+TLAR +VPFT+ DAT LT+AGYVGED E+++ KLL A+D++VE AQ GIVYID
Sbjct: 122 KTLLAQTLARTFDVPFTMADATTLTEAGYVGEDVENIILKLLQASDYNVEKAQHGIVYID 181
Query: 236 EVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKD 294
E+DKI KAE+ + RDVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT +
Sbjct: 182 EIDKITRKAENPSITRDVSGEGVQQALLKLMEGTTASVP-PQGG-RKHPQQEFLQVDTTN 239
Query: 295 ILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVA 354
ILFICGGAF GL+K I +R Q SIGFGA V D LLE + DL+
Sbjct: 240 ILFICGGAFAGLDKIIGDRLQKRSIGFGAHVAD-------PDKRRIGELLEKSEPEDLLK 292
Query: 355 YGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRL 414
+GLIPEF+GR P++ SL L+ D LV +L EPKNA+ +QY K+F + V+L F DDALR
Sbjct: 293 FGLIPEFVGRLPVIASLHDLDVDALVTILQEPKNAIVKQYAKLFELEGVELTFNDDALRA 352
Query: 415 IAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGA 474
IA++A+ + TGARGLR+++E +L + M+++P+ + N V++DK+ V P
Sbjct: 353 IAERAIKRKTGARGLRSIVEGLLLDTMYDLPDLE----GCNEVVIDKDVVEGRKEP---I 405
Query: 475 KILHGDG 481
++ G+G
Sbjct: 406 RVFDGEG 412
>gi|222528716|ref|YP_002572598.1| ATP-dependent protease ATP-binding subunit ClpX
[Caldicellulosiruptor bescii DSM 6725]
gi|254763830|sp|B9MQ33.1|CLPX_ANATD RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|222455563|gb|ACM59825.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Caldicellulosiruptor bescii DSM 6725]
Length = 433
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 194/400 (48%), Positives = 262/400 (65%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTPKEI + LD++V+GQ+ AKK IL AVYNHYKRIY+
Sbjct: 61 LPTPKEIKEFLDQYVVGQDHAKK-----IL----------SVAVYNHYKRIYYH------ 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + D+ VEL+KSN+L++GPTGSGKT LA+TLA+++NVPF
Sbjct: 100 --------------------NTKKDD-VELQKSNILMLGPTGSGKTYLAQTLAKMLNVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L +L+ AD+D+E A+RGI+YIDE+DKI K+++ + R
Sbjct: 139 AIADATTLTEAGYVGEDVENILLRLIQNADYDIERAERGIIYIDEIDKIARKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGT+ +VP P G RKHP + I IDT +ILFICGGAF G+EK I
Sbjct: 199 DVSGEGVQQALLKILEGTIASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFEGIEKII 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + ++GF A +L + DL+ +G+IPEFIGR PI+V+
Sbjct: 257 EKRIGEKTLGFNA-------KIESKKEKKIGDILRQIMPQDLLKFGMIPEFIGRVPIIVT 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L AL+++ L+++L EPKNAL +QY+K+F+M+ V+L F DAL IA KA+ +NTGARGLR
Sbjct: 310 LDALDKEALIKILTEPKNALVKQYQKLFAMDGVELEFEKDALEAIADKAIERNTGARGLR 369
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
A++E I+ + MFEIP + V++ K AV D P
Sbjct: 370 AIMEEIMLDVMFEIP----SNDKIEKVIITKAAVLKEDKP 405
>gi|304413825|ref|ZP_07395242.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Candidatus Regiella insecticola LSR1]
gi|304283545|gb|EFL91940.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Candidatus Regiella insecticola LSR1]
Length = 423
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 266/401 (66%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK+ AVYNHYKR+
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKA---------------LAVAVYNHYKRL--------- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
CN +++ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 100 -------------------CNGDSNNGVELGKSNILLIGPTGSGKTLLAETLARFLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D++VE AQRGIVYIDE+DKI K+E+ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYNVEKAQRGIVYIDEIDKISRKSENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S+R + IGFGA V++ + + LL + DL+ +GLIPEFIGR P++
Sbjct: 259 SQRLNTGTGIGFGAIVKS------VCEKPSEGELLRQAEPEDLIKFGLIPEFIGRLPVVT 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ LN++ L+++L EPKNAL +QY+ +F++ +V+L FT++AL IAKKAMA+ TGARGL
Sbjct: 313 TLTELNQEALIKILKEPKNALTKQYQALFNLESVELEFTEEALTAIAKKAMARKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P + V+ V+VD+ A+ AP
Sbjct: 373 RSIVEAALLDTMYDLPSME----KVDKVVVDESAIDGQSAP 409
>gi|336124547|ref|YP_004566595.1| ClpX [Vibrio anguillarum 775]
gi|335342270|gb|AEH33553.1| ClpX [Vibrio anguillarum 775]
Length = 426
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 257/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP +I + LD++VIGQE AKK AVYNHYKR+ +
Sbjct: 65 LPTPHKIREHLDDYVIGQEHAKKV---------------LAVAVYNHYKRLRN------- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G G VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 103 -----------GDKTSDG---------VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLVEGTIASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R S IGFGA VR+ T + + L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVATGSGIGFGAEVRSKDETKTIGE------LFNQVEPEDLVKYGLIPEFIGRLPVTA 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY +F + NV L F +DALR IAKKAM + TGARGL
Sbjct: 315 TLTELDEEALIQILCEPKNALTKQYAALFELENVDLEFREDALRAIAKKAMNRKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P + V+ V++D+ + P
Sbjct: 375 RSILEGVLLETMYELP----SVNDVSKVVIDESVINGESQP 411
>gi|270156950|ref|ZP_06185607.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
longbeachae D-4968]
gi|289164626|ref|YP_003454764.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
longbeachae NSW150]
gi|269988975|gb|EEZ95229.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
longbeachae D-4968]
gi|288857799|emb|CBJ11643.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
longbeachae NSW150]
Length = 424
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 194/411 (47%), Positives = 260/411 (63%), Gaps = 56/411 (13%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
+ + E + LP+P+EI LDE+VIGQ AKK AVYNHYK
Sbjct: 52 THDTHEEAEVQLPSPQEISGFLDEYVIGQAHAKKV---------------LSVAVYNHYK 96
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
R+ H S ++ VEL KSN+LL+GPTGSGKTLLA
Sbjct: 97 RLQHKS-----------------------------EDGVELGKSNILLIGPTGSGKTLLA 127
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+TLARI+NVPF + DAT LT+AGYVGED E+++ KLL D+DV+ AQ GIVYIDE+DKI
Sbjct: 128 QTLARILNVPFAMADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAQHGIVYIDEIDKI 187
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K+++ + RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT +ILFIC
Sbjct: 188 SRKSDNPSITRDVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTSNILFIC 245
Query: 300 GGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIP 359
GGAF GLEK I ER S IGF A ++ T D + S +L ++S DL+ YGLIP
Sbjct: 246 GGAFAGLEKVIRERSDKSGIGFSAQLKNKKDT---NDEI--SKVLNQLESDDLIKYGLIP 300
Query: 360 EFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKA 419
EF+GR P++ +L L++ L+ +L PKNAL +Q++ +F M +V+L F D+AL IAKKA
Sbjct: 301 EFVGRLPVVTTLQELDQSALIDILTNPKNALTKQFQSLFKMEDVELEFRDEALVAIAKKA 360
Query: 420 MAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+ + GARGLRA+LENIL + M+E+P + V V+VD+ + P
Sbjct: 361 LERKMGARGLRAILENILLDTMYELPSLE----GVIKVVVDESVITGSSKP 407
>gi|255019391|ref|ZP_05291500.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Acidithiobacillus caldus ATCC 51756]
gi|340782144|ref|YP_004748751.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Acidithiobacillus caldus SM-1]
gi|254971163|gb|EET28616.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Acidithiobacillus caldus ATCC 51756]
gi|340556297|gb|AEK58051.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Acidithiobacillus caldus SM-1]
Length = 427
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 195/384 (50%), Positives = 259/384 (67%), Gaps = 51/384 (13%)
Query: 64 RNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIY 123
++ +G LP P EI K LDE+VIGQ+ AKK AVYNHYKR+
Sbjct: 56 QDEQGGSKLPKPMEIRKTLDEYVIGQDAAKKV---------------LSVAVYNHYKRLE 100
Query: 124 HSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTL 183
H G K G +ND VEL+KSN+LL+GPTGSGKTLLA+TL
Sbjct: 101 H--------------------GGKGGR---DND--VELDKSNILLIGPTGSGKTLLAQTL 135
Query: 184 ARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-K 242
AR++NVPF + DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K
Sbjct: 136 ARLLNVPFAMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQTGIVYIDEIDKISRK 195
Query: 243 AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGA 302
+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT+ ILFICGGA
Sbjct: 196 SENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRHILFICGGA 253
Query: 303 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSL-LESVDSGDLVAYGLIPEF 361
F GLEK ++ R + +GF A ++ TD +S+L +E+++ DLV YGLIPEF
Sbjct: 254 FAGLEKAVASRVEKGGMGFNAQIKR-------TDKQNSSNLMMENLEPEDLVRYGLIPEF 306
Query: 362 IGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMA 421
+GR P++ L L+ED LV +L EP+N+L +QY+K+F++ V L F +ALR IAKKA+
Sbjct: 307 VGRLPVIALLEELDEDALVSILTEPRNSLVKQYQKLFALEGVTLEFRPEALRAIAKKALT 366
Query: 422 KNTGARGLRALLENILTEAMFEIP 445
+ TGARGLR++LE IL ++M+E+P
Sbjct: 367 RKTGARGLRSILEQILLDSMYELP 390
>gi|319763663|ref|YP_004127600.1| ATP-dependent clp protease, ATP-binding subunit clpx
[Alicycliphilus denitrificans BC]
gi|330824072|ref|YP_004387375.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Alicycliphilus
denitrificans K601]
gi|317118224|gb|ADV00713.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Alicycliphilus denitrificans BC]
gi|329309444|gb|AEB83859.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Alicycliphilus denitrificans K601]
Length = 421
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 198/405 (48%), Positives = 261/405 (64%), Gaps = 55/405 (13%)
Query: 67 EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSS 126
EG DLPTP EI LD +VIGQE+AK++ AVYNHYKR+ H
Sbjct: 60 EGRGDLPTPAEIKANLDSYVIGQEKAKRT---------------LAVAVYNHYKRLRHKD 104
Query: 127 LQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARI 186
K+G +VE L KSN+LL+GPTGSGKTLLA+TLAR
Sbjct: 105 --------------------KAGKDDVE------LSKSNILLIGPTGSGKTLLAQTLARQ 138
Query: 187 VNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAES 245
++VPF + DAT LT+AGYVGED E+++ KLL + ++DVE AQRGIVYIDE+DKI K+++
Sbjct: 139 LDVPFVMADATTLTEAGYVGEDVENIVQKLLQSCNYDVERAQRGIVYIDEIDKISRKSDN 198
Query: 246 RNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVG 305
+ RDVSGEGVQQALLK++EGT+ +VP P G RKHP D + IDT +ILFICGGAF G
Sbjct: 199 PSITRDVSGEGVQQALLKLIEGTMASVP-PQGG-RKHPNQDFLQIDTTNILFICGGAFAG 256
Query: 306 LEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRF 365
LEK I R + S IGFGA V++ + LT+ + + ++ DL+ +GLIPE +GR
Sbjct: 257 LEKVIENRTEASGIGFGAAVKSK-KQRSLTE------VFQDIEPEDLIKFGLIPELVGRM 309
Query: 366 PILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTG 425
P++ +L+ L ED LVQ+L EPKNAL +QY K+ +M V L AL+ IA+KA+A+ TG
Sbjct: 310 PVVTALAELGEDALVQILTEPKNALVKQYSKLLAMEGVDLEIRPAALKAIARKAIARKTG 369
Query: 426 ARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
ARGLR++LE L MF++P S+V V+VD+ + AP
Sbjct: 370 ARGLRSILEQALIGTMFDLP----NVSNVEKVVVDEATIEESKAP 410
>gi|120610145|ref|YP_969823.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax
citrulli AAC00-1]
gi|326316314|ref|YP_004233986.1| ATP-dependent Clp protease ATP-binding subunit clpX [Acidovorax
avenae subsp. avenae ATCC 19860]
gi|166214750|sp|A1TM61.1|CLPX_ACIAC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|120588609|gb|ABM32049.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acidovorax
citrulli AAC00-1]
gi|323373150|gb|ADX45419.1| ATP-dependent Clp protease ATP-binding subunit clpX [Acidovorax
avenae subsp. avenae ATCC 19860]
Length = 421
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 201/408 (49%), Positives = 265/408 (64%), Gaps = 57/408 (13%)
Query: 64 RNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIY 123
R+S G DLPTP EI LD +VIGQE AK++ AVYNHYKR+
Sbjct: 59 RDSRG--DLPTPSEIKANLDNYVIGQEIAKRT---------------LAVAVYNHYKRLR 101
Query: 124 HSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTL 183
H K+G DE VEL KSN+LL+GPTGSGKTLLA+TL
Sbjct: 102 HKD--------------------KAGK-----DE-VELAKSNILLIGPTGSGKTLLAQTL 135
Query: 184 ARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-K 242
AR+++VPF + DAT LT+AGYVGED E+++ KLL + +++VE AQRGIVYIDE+DKI K
Sbjct: 136 ARMLDVPFVMADATTLTEAGYVGEDVENIVQKLLQSCNYEVERAQRGIVYIDEIDKISRK 195
Query: 243 AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGA 302
+++ + RDVSGEGVQQALLK++EGT+ +VP P G RKHP D + IDT +ILFICGGA
Sbjct: 196 SDNPSITRDVSGEGVQQALLKLIEGTMASVP-PQGG-RKHPNQDFLQIDTTNILFICGGA 253
Query: 303 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFI 362
F GLEK I R + S IGFGA V++ + LT+ ++ DL+ +GLIPE +
Sbjct: 254 FAGLEKVIENRTEASGIGFGAAVKSK-KQRSLTEVFT------EIEPEDLIKFGLIPELV 306
Query: 363 GRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAK 422
GR P++ +L+ L+ED LVQ+L EPKNAL +QY K+ +M V+L AL+ IA+KA+A+
Sbjct: 307 GRMPVVTALAELSEDALVQILTEPKNALVKQYSKLLAMEGVELEIRPAALKAIARKALAR 366
Query: 423 NTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
TGARGLR++LE L MF++P TS+V V+VD+ + AP
Sbjct: 367 KTGARGLRSILEQSLIGTMFDLP----NTSNVEKVVVDESTIEENKAP 410
>gi|83589393|ref|YP_429402.1| ATP-dependent protease ATP-binding subunit ClpX [Moorella
thermoacetica ATCC 39073]
gi|123524974|sp|Q2RL30.1|CLPX_MOOTA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|83572307|gb|ABC18859.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Moorella
thermoacetica ATCC 39073]
Length = 419
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 268/401 (66%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LP PKEI + LD++VI Q++AKK+ AVYNHYKRI
Sbjct: 60 ELPKPKEIREILDQYVISQDQAKKA---------------LAVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N ++ D+ VEL+KSN++++GPTGSGKTLLA+TLA+I+NVP
Sbjct: 97 -------------------NLGMKMDD-VELQKSNIIMLGPTGSGKTLLAQTLAKILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A++GIVYIDE+DKI K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ +VP P G RKHP + I +DT +ILFICGGAF GL+K
Sbjct: 197 RDVSGEGVQQALLKILEGTIASVP-PQGG-RKHPHQEFIQLDTTNILFICGGAFDGLDKI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R ++GFGA +R G D V +L+ V DL+ YGLIPEF+GR P++V
Sbjct: 255 IKNRISQKTMGFGAEIR------GKNDVQV-GDILKQVLPVDLLKYGLIPEFVGRLPVIV 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+E L++VL EP+NAL +QY+K+F M+ V L F +DAL IA++A+ + TGARGL
Sbjct: 308 TLDALDETALIRVLTEPRNALVKQYQKLFEMDGVTLEFKEDALVTIAREAIKRETGARGL 367
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA+LE I+ + M+EIP ++++ ++ K+ V + P
Sbjct: 368 RAILEEIMLDVMYEIP----SRNNISKCIITKDVVLRKEEP 404
>gi|422307872|ref|ZP_16395026.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1035(8)]
gi|408618824|gb|EKK91882.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae CP1035(8)]
Length = 426
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 260/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP++I + LD++VIGQE AKK AVYNHYKR+
Sbjct: 65 LPTPRKIREHLDDYVIGQEHAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 ---------------RNGDTTSEG---VELGKSNILLIGPTGSGKTLLAETLARLLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI K+E+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKSENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR+ + L S L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVATGTGIGFGADVRSKDNSKTL------SELFTQVEPEDLVKYGLIPEFIGRLPVTA 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E L+Q+L EPKNAL +QY +F + NV L F +DAL+ IA KAM + TGARGL
Sbjct: 315 TLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAIAAKAMKRKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P + V+ V++D+ + AP
Sbjct: 375 RSILEAVLLEIMYELPSME----EVSKVVIDESVINGESAP 411
>gi|336315651|ref|ZP_08570559.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rheinheimera
sp. A13L]
gi|335879970|gb|EGM77861.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rheinheimera
sp. A13L]
Length = 424
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 265/401 (66%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQE AKK AVYNHYKR+
Sbjct: 66 LPVPKEIRAHLDDYVIGQEHAKKV---------------LAVAVYNHYKRLR-------- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++++ + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 103 --------------------SMQHKQDVELSKSNILLIGPTGSGKTLLAETLARLLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + S IGFGA VRA ++ LT++ + V+ DLV YGLIPEFIGR P++
Sbjct: 261 EQRCAKGSGIGFGAEVRATSQSRTLTES------FKDVEPEDLVKYGLIPEFIGRLPVVA 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+ L+Q+L EPKNAL +Q+ +F M +V+L F +DAL+ IA+KAM + TGARGL
Sbjct: 315 TLTELDLAALMQILSEPKNALVKQFGALFQMEDVELEFREDALKAIAQKAMERKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++EN+L + M+++P + V+ V++D+ + P
Sbjct: 375 RSIVENVLLDTMYDLPSME----HVSKVVIDETVIRGESQP 411
>gi|374295112|ref|YP_005045303.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Clostridium
clariflavum DSM 19732]
gi|359824606|gb|AEV67379.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Clostridium
clariflavum DSM 19732]
Length = 431
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 192/376 (51%), Positives = 255/376 (67%), Gaps = 53/376 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P P EI + LD++VIGQE AKK+ AVYNHYKRI
Sbjct: 60 DIPKPAEIKEILDQYVIGQESAKKA---------------LSVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
S K + VEL+KSN++++GPTGSGKTLLA+TLA+I+NVP
Sbjct: 97 ------------NSDFKGSD--------VELQKSNIIMLGPTGSGKTLLAQTLAKILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E A++GI+YIDEVDKI K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIERAEKGIIYIDEVDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFICGGAF G+EK
Sbjct: 197 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFDGIEKI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R S+GFGA + + + + +L+ + DL+ +GLIPEF+GR PI+V
Sbjct: 255 IQNRIGKKSMGFGANIESKKK-------MDVGEILKHIYPQDLLKFGLIPEFVGRLPIMV 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SL +L++ L+Q+L EPKNAL +QYKK+F M++V+L F + AL IA+KA+ +NTGARGL
Sbjct: 308 SLHSLDKAALIQILTEPKNALVKQYKKLFEMDDVELEFEEGALEAIAEKAIERNTGARGL 367
Query: 430 RALLENILTEAMFEIP 445
RA++E I+ + M+EIP
Sbjct: 368 RAIIEEIMLDVMYEIP 383
>gi|301631595|ref|XP_002944883.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like
[Xenopus (Silurana) tropicalis]
Length = 421
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 192/401 (47%), Positives = 257/401 (64%), Gaps = 55/401 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLPTP EI LD +VIGQE+AK++ AVYNHYKR+ +
Sbjct: 64 DLPTPAEIKANLDNYVIGQEKAKRT---------------LAVAVYNHYKRLRYKD---- 104
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+ DE VEL KSN+LL+GPTGSGKTLLA+TLAR ++VP
Sbjct: 105 ---------------------KADKDE-VELSKSNILLIGPTGSGKTLLAQTLARQLDVP 142
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LT+AGYVGED E+++ KLL + ++DVE AQRGI+YIDE+DKI K+++ +
Sbjct: 143 FVMADATTLTEAGYVGEDVENIISKLLQSCNYDVEKAQRGIIYIDEIDKISRKSDNPSIT 202
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGT+ +VP P G RKHP D + IDT ++LFICGGAF GLEK
Sbjct: 203 RDVSGEGVQQALLKLIEGTMASVP-PQGG-RKHPNQDFLQIDTTNVLFICGGAFAGLEKV 260
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R + S IGFGA VR+ + S + + ++ DL+ +G+IPE +GR P++
Sbjct: 261 IENRTEASGIGFGAAVRSKQQRS-------ISEVFQDIEPEDLIKFGIIPELVGRMPVVT 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SL+ L+ED LVQ+L EPKNAL +QY K+ SM V+L AL+ IA+KA+A+ TGARGL
Sbjct: 314 SLAELSEDALVQILTEPKNALAKQYSKLLSMEGVELEIRPAALKAIARKALARKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE L MF++P ++V V+VD+ + P
Sbjct: 374 RSILEQALIGTMFDLP----NAANVEKVVVDESTIEESKPP 410
>gi|319408365|emb|CBI82018.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Bartonella
schoenbuchensis R1]
Length = 424
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 197/411 (47%), Positives = 266/411 (64%), Gaps = 68/411 (16%)
Query: 36 EIMGGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKS 95
E+ IR++ +S+G+++ +PTP+EI LD++VIGQ AK+
Sbjct: 44 ELCTDIIREESKSSGVKARD---------------GVPTPQEILTVLDDYVIGQRYAKRV 88
Query: 96 HIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEN 155
AV+NHYKR+ H S K+G+
Sbjct: 89 ---------------LSVAVHNHYKRLAHQS--------------------KNGD----- 108
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
+EL KSN+LL+GPTG GKT LA+TLARI++VPFT+ DAT LT+AGYVGED E+++ K
Sbjct: 109 ---IELSKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILK 165
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
LL +AD++VE AQRGIVYIDEVDKI KA++ + RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 LLQSADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTVASVP- 224
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
P G RKHP+ + + +DT +ILFICGGAF GLE+ IS R + +SIGF A V+A
Sbjct: 225 PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA------- 276
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
D + ++ DLV +GLIPEFIGR PI+ +L L+ + LVQ+L +PKNAL +QY
Sbjct: 277 PDERRVGEIFHDLEPEDLVKFGLIPEFIGRLPIIATLEDLDINALVQILSQPKNALVKQY 336
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP 445
K++F M NV+L F +DALR+IA KA+ + TGARGLR+++E IL + MFE+P
Sbjct: 337 KRLFEMENVELTFHEDALRVIANKAIERKTGARGLRSIMEKILLDTMFELP 387
>gi|392421145|ref|YP_006457749.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri CCUG 29243]
gi|390983333|gb|AFM33326.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri CCUG 29243]
Length = 426
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 257/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQERAKK IL AVYNHYKR+ ++E
Sbjct: 65 LPAPKEISGILDQYVIGQERAKK-----IL----------AVAVYNHYKRLNQRDKKEE- 108
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 109 ---------------------------VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFAGLEKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + +A L +V+ DLV +GLIPEF+GR P++ +
Sbjct: 260 QGRSTQGGIGFNAEVRSKDPGKKIGEA------LRAVEPDDLVKFGLIPEFVGRLPVIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F + V L F DAL+ +A +A+ + TGARGLR
Sbjct: 314 LDELDEAALIQILTEPKNALTKQYAKLFELEGVDLEFRPDALKAVASRALERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP K V+ V++D+ + P
Sbjct: 374 SILEGVLLDTMYEIPSQK----EVSKVVIDESVIEGTSQP 409
>gi|403253049|ref|ZP_10919354.1| ATP-dependent protease ATP-binding subunit ClpX [Thermotoga sp.
EMP]
gi|402811811|gb|EJX26295.1| ATP-dependent protease ATP-binding subunit ClpX [Thermotoga sp.
EMP]
Length = 406
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 197/403 (48%), Positives = 264/403 (65%), Gaps = 61/403 (15%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
++PTP EI LD+++IGQERAKK AVYNHYKR++ +
Sbjct: 54 EIPTPAEIKAELDKYIIGQERAKKV---------------LSVAVYNHYKRVFSN----- 93
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+DS ND VE+EKSNVLL+GPTG+GKT LA+ LA+I+NVP
Sbjct: 94 -------LDS--------------ND--VEIEKSNVLLIGPTGTGKTYLARILAKILNVP 130
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNN-G 249
F I DAT LT+AGYVGED E+V+ +LL AA+FDVE AQ GI+YIDE+DKI K +
Sbjct: 131 FAIADATPLTEAGYVGEDVENVVLRLLEAANFDVERAQYGIIYIDEIDKIAKKSPNPSIT 190
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ NVP P G RKHP + I +DT++ILFI GGAF GLE+
Sbjct: 191 RDVSGEGVQQALLKILEGTIANVP-PQGG-RKHPYQEFIKVDTRNILFIAGGAFDGLEEI 248
Query: 310 ISERRQDSSIGFGAPVRAN--MRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPI 367
I R Q +++GFGA +++ MR G +L+ V DLV YGLIPEF+GRFP+
Sbjct: 249 IKRRIQSTTMGFGAEIKSKKEMRLG---------EILKHVTPDDLVQYGLIPEFVGRFPV 299
Query: 368 LVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGAR 427
+ +L L+ED L+++L EPKNA+ RQY+K+F ++ VKL TD+ALR+IA+KA+ + TGAR
Sbjct: 300 IATLDDLSEDDLIRILKEPKNAVVRQYQKLFEIDGVKLEVTDEALRIIARKALKRGTGAR 359
Query: 428 GLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
L+ + E ++ + MFE+P K +V V++ +E + P
Sbjct: 360 ALKNVFEEMMIDMMFELPNLK----NVEKVVITEEVALGKEKP 398
>gi|322515315|ref|ZP_08068312.1| ATP-dependent Clp protease ATP-binding subunit [Actinobacillus
ureae ATCC 25976]
gi|322118691|gb|EFX90903.1| ATP-dependent Clp protease ATP-binding subunit [Actinobacillus
ureae ATCC 25976]
Length = 419
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 199/402 (49%), Positives = 259/402 (64%), Gaps = 50/402 (12%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
++PTP EI LDE+VIGQE AKK AVYNHYKR+ ++
Sbjct: 63 NVPTPHEIHAHLDEYVIGQEHAKKV---------------LSVAVYNHYKRLRNAL---- 103
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
SG K N VEL KSN+LL+GPTGSGKTLLA+TLAR +NVP
Sbjct: 104 -------------SGHKETNG-------VELGKSNILLIGPTGSGKTLLAETLARRLNVP 143
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LTQAGYVGED E+V+ KLL DFD E A+RGIV+IDE+DKI K+ES +
Sbjct: 144 FAVADATTLTQAGYVGEDVENVIQKLLMKCDFDAEQAERGIVFIDEIDKITRKSESPSIT 203
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGTV N I G RKHP+G+ IP+DT ILFICGGAF GL+K
Sbjct: 204 RDVSGEGVQQALLKLIEGTVAN--INPQGSRKHPKGETIPVDTSKILFICGGAFAGLDKL 261
Query: 310 ISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
+ R + IGFGA ++ + LT+ L + V+ DLV +GLIPE IGR P++
Sbjct: 262 VEARTNKQGGIGFGAELKKDKEREDLTE------LFKQVEPEDLVRFGLIPELIGRLPVV 315
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
L L+E+ L+Q+L EPKNA+ +QY+ +F M V+L FT DAL IA+K++++ TGARG
Sbjct: 316 TPLPELDEEALIQILTEPKNAIIKQYQALFQMEGVELKFTKDALIAIAEKSISRKTGARG 375
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++EN+L + M+ +P K +V V + K+ V + D P
Sbjct: 376 LRSIVENLLLDTMYNLPTLK-AEKNVKKVTIGKDCVENGDKP 416
>gi|418019488|ref|ZP_12658968.1| endopeptidase Clp ATP-binding regulatory subunit (clpX) [Candidatus
Regiella insecticola R5.15]
gi|347605155|gb|EGY29641.1| endopeptidase Clp ATP-binding regulatory subunit (clpX) [Candidatus
Regiella insecticola R5.15]
Length = 423
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 265/401 (66%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK+ AVYNHYKR+
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKA---------------LAVAVYNHYKRL--------- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
CN +++ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 100 -------------------CNGDSNNGVELGKSNILLIGPTGSGKTLLAETLARFLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D++VE AQRGIVYIDE+DKI K+E+ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYNVEKAQRGIVYIDEIDKISRKSENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S+R + IGFGA V++ + + LL + DL+ +GLIPEFIGR P++
Sbjct: 259 SQRLNTGTGIGFGAIVKS------VCEKPSEGELLRQAEPEDLIKFGLIPEFIGRLPVVT 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ LN++ L+++L EPKNAL +QY+ +F++ V+L FT++AL IAKKAMA+ TGARGL
Sbjct: 313 TLTELNQEALIKILKEPKNALTKQYQALFNLERVELEFTEEALTAIAKKAMARKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P + V+ V+VD+ A+ AP
Sbjct: 373 RSIVEAALLDTMYDLPSME----KVDKVVVDESAIDGQSAP 409
>gi|350530715|ref|ZP_08909656.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
rotiferianus DAT722]
Length = 426
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 258/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTPK+I + LD++VIGQ+ AKK AVYNHYKR+
Sbjct: 65 LPTPKQIREHLDDYVIGQDYAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 ---------------RNGDTTSEG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR+ T L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVATGTGIGFGAEVRSKNETK------TVGELFMQVEPEDLVKYGLIPEFIGRLPVTT 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY +F + + +L F +DALR IAKKAM + TGARGL
Sbjct: 315 TLTELDEEALIQILCEPKNALTKQYAALFELEDAELEFREDALRAIAKKAMERKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P + V+ V++D+ + P
Sbjct: 375 RSILEGVLLETMYELP----SATDVSKVVIDESVINGESEP 411
>gi|323498277|ref|ZP_08103279.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio sinaloensis
DSM 21326]
gi|323316705|gb|EGA69714.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio sinaloensis
DSM 21326]
Length = 427
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 258/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P+EI + LD++VIGQ+ AKK AVYNHYKR+
Sbjct: 65 LPAPREIREHLDDYVIGQDYAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 ---------------RNGDTTSEG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR+ T L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVATGTGIGFGAEVRSKDETK------TVGELFTQVEPEDLVKYGLIPEFIGRLPVTT 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+ED L+Q+L EPKNAL +QY +F + + +L F +DALR IAKKAM + TGARGL
Sbjct: 315 TLTELDEDALIQILCEPKNALTKQYAALFELEDSELEFREDALRAIAKKAMERKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE++L E M+E+P + V+ V++D+ + P
Sbjct: 375 RSILESVLLETMYELP----SMNDVSKVVIDESVINGESEP 411
>gi|337288343|ref|YP_004627815.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermodesulfobacterium sp. OPB45]
gi|334902081|gb|AEH22887.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermodesulfobacterium geofontis OPF15]
Length = 420
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 196/416 (47%), Positives = 265/416 (63%), Gaps = 53/416 (12%)
Query: 56 ETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAV 115
E E N + E + L P EI LD++VIGQERAKK IL AV
Sbjct: 44 EEEYERINLSEENHTKLSKPAEIKAYLDQYVIGQERAKK-----IL----------SVAV 88
Query: 116 YNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSG 175
YNHYKRI + K+ + D VEL+K+N+LL+GPTGSG
Sbjct: 89 YNHYKRIEYQKSNKKHLKD------------------------VELQKTNILLIGPTGSG 124
Query: 176 KTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYID 235
KTLLA+TLA+ + VPFTI DAT LT+AGYVGED E++L LL AA++D+E AQ+GIVYID
Sbjct: 125 KTLLAQTLAKFLKVPFTIADATPLTEAGYVGEDVENILLYLLQAANYDLELAQKGIVYID 184
Query: 236 EVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKD 294
E+DKI K E + RDVSGEGVQQALLK+LEGT+ N IP G RKHP+ + I +DT +
Sbjct: 185 EIDKIAKKGEGPSITRDVSGEGVQQALLKILEGTIAN--IPPKGGRKHPQQEYIKMDTTN 242
Query: 295 ILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVA 354
ILFICGGAFVGL++ I R SIGFGA ++ N++ L +L V DL+
Sbjct: 243 ILFICGGAFVGLDEIIKRRLGKGSIGFGAQIK-NVKD------LTLGEILSQVQPEDLIK 295
Query: 355 YGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRL 414
YG IPEF+GR P++ +L L D LV++L+EPKN++ +QY+K+F M V+L FT+ ALR+
Sbjct: 296 YGFIPEFVGRLPVIATLDELTVDDLVRILVEPKNSIIKQYQKLFEMEGVELKFTEKALRV 355
Query: 415 IAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+A++A+ + TGARGLR+++E ++ + M+EIP + V +V +E + + P
Sbjct: 356 VAEEAVKRKTGARGLRSIIEEVMVDVMYEIP----SLTDVKECIVTEEVILKKERP 407
>gi|153009535|ref|YP_001370750.1| ATP-dependent protease ATP-binding subunit ClpX [Ochrobactrum
anthropi ATCC 49188]
gi|404319232|ref|ZP_10967165.1| ATP-dependent protease ATP-binding subunit ClpX [Ochrobactrum
anthropi CTS-325]
gi|166214795|sp|A6X117.1|CLPX_OCHA4 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|151561423|gb|ABS14921.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ochrobactrum
anthropi ATCC 49188]
Length = 424
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 191/375 (50%), Positives = 253/375 (67%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI LD++VIGQ+ AK+ AV+NHYKR+ H S
Sbjct: 65 VPTPQEIMAVLDDYVIGQKDAKRV---------------LSVAVHNHYKRLAHQS----- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KS + +EL KSN+LL+GPTG GKT LA+TLARI++VPF
Sbjct: 105 ---------------KSSD--------IELAKSNILLVGPTGCGKTYLAQTLARIIDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 202 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA VR+ D + ++ DL+ +GLIPEF+GR P++ +
Sbjct: 260 SARGEKTSIGFGATVRS-------VDERRIGDVFRELEPEDLLKFGLIPEFVGRLPVIAT 312
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ D LVQ+L EPKNAL +QY+++F M +V+L F DDALR IA KA+ + TGARGLR
Sbjct: 313 LEDLDVDALVQILTEPKNALVKQYQRLFDMESVELSFHDDALRAIANKAVERKTGARGLR 372
Query: 431 ALLENILTEAMFEIP 445
+++E IL + MFE+P
Sbjct: 373 SIMEKILLDTMFELP 387
>gi|359396720|ref|ZP_09189771.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Halomonas
boliviensis LC1]
gi|357969398|gb|EHJ91846.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Halomonas
boliviensis LC1]
Length = 426
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 264/400 (66%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP+EI LD++VIGQ+RAK M++ V AVYNHYKR
Sbjct: 65 LPTPREIRHTLDDYVIGQDRAK----------MVLSV-----AVYNHYKR---------- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
L + V+ G+ VEL KSN+LL+GPTGSGKTLLA+T+AR++NVPF
Sbjct: 100 ----------LKTDVRDGD--------VELGKSNILLIGPTGSGKTLLAETMARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE A+RGIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAERGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT +VP P G RKHP+ + + ++T +ILFI GGAF GL+K I
Sbjct: 202 DVSGEGVQQALLKLIEGTTASVP-PQGG-RKHPQQEFVQVNTGNILFIVGGAFAGLDKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + IGF A V++ + G+ LL V+ DLV +GLIPEF+GR PI+ +
Sbjct: 260 RDRAEKGGIGFNAAVKSKESSRGV------GELLADVEPDDLVKFGLIPEFVGRLPIIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L ED LVQ+L EPKN+L +QY K+F M +V L F D+ALR +A+KAM + TGARGLR
Sbjct: 314 LMELTEDALVQILTEPKNSLVKQYAKLFEMEDVTLEFRDEALRAVAEKAMERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE++L + M+EIP + V+ V++D + P
Sbjct: 374 SILESVLLDTMYEIPSLE----GVSKVVIDGSVIAGESEP 409
>gi|452747928|ref|ZP_21947717.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri NF13]
gi|452008077|gb|EME00321.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri NF13]
Length = 426
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 257/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQERAKK IL AVYNHYKR+ ++E
Sbjct: 65 LPAPKEISGILDQYVIGQERAKK-----IL----------AVAVYNHYKRLNQRDKKEE- 108
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 109 ---------------------------VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFAGLEKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + +A L +V+ DLV +GLIPEF+GR P++ +
Sbjct: 260 QGRSTQGGIGFNAEVRSKDPGKKIGEA------LRAVEPDDLVKFGLIPEFVGRLPVIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F + V L F DAL+ +A +A+ + TGARGLR
Sbjct: 314 LDELDEAALIQILTEPKNALTKQYAKLFELEGVDLEFRPDALKAVASRALERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP K V+ V++D+ + P
Sbjct: 374 SILEGVLLDTMYEIPSQK----DVSKVVIDESVIEGTSQP 409
>gi|325290595|ref|YP_004266776.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Syntrophobotulus glycolicus DSM 8271]
gi|324965996|gb|ADY56775.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Syntrophobotulus glycolicus DSM 8271]
Length = 417
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 194/395 (49%), Positives = 260/395 (65%), Gaps = 57/395 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
++P P EI LD++VIGQE+AKK AVYNHYKRI SS
Sbjct: 60 EIPKPVEIKAILDQYVIGQEQAKKV---------------LSVAVYNHYKRISQSS---- 100
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+D VEL+KSN++++GPTGSGKTLLA TLA+I+NVP
Sbjct: 101 ------KIDD------------------VELQKSNIVMLGPTGSGKTLLASTLAKILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ A+DFD+E A+RGI+YIDEVDKI K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQASDFDIEKAERGIIYIDEVDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I +DT +ILFI GGAF G+EK
Sbjct: 197 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQLDTTNILFIVGGAFDGIEKI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R ++GFGA ++ LL + GDL+ YGLIPEF+GR P++V
Sbjct: 255 IQNRTGKKTMGFGAEIQKKSEKN-------VGELLRQIMPGDLLKYGLIPEFVGRIPVVV 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL++D LV++L EPKNAL +QY+K+ M+ V+L FT+DAL+ IA++A+ +NTGARGL
Sbjct: 308 TLEALDQDALVRILTEPKNALVKQYEKLLEMDGVQLEFTEDALKAIAEEAIRRNTGARGL 367
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
RA++E + M++IP + V +V+KE++
Sbjct: 368 RAIVEETMLNVMYDIP----TRTDVTKCVVNKESI 398
>gi|291518669|emb|CBK73890.1| endopeptidase Clp ATP-binding regulatory subunit (clpX)
[Butyrivibrio fibrisolvens 16/4]
Length = 428
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 197/396 (49%), Positives = 261/396 (65%), Gaps = 57/396 (14%)
Query: 70 IDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQK 129
I+L P+++ LD++VIGQ+ AKK AVYNHYKRI +
Sbjct: 62 INLQKPEDMKAFLDQYVIGQDEAKKV---------------LSVAVYNHYKRIMANP--- 103
Query: 130 ELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNV 189
+D VEL+KSNVL++GPTGSGKTLLA+TLAR++ V
Sbjct: 104 -------------------------DDIDVELQKSNVLMLGPTGSGKTLLAQTLARVLGV 138
Query: 190 PFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNN 248
PF I DAT LT+AGYVGED E++L KL+ AA+FD++ A+ GIVYIDE+DKI K+E+ +
Sbjct: 139 PFAIADATTLTEAGYVGEDVENILLKLIQAAEFDIKKAEIGIVYIDEIDKITKKSENVSI 198
Query: 249 GRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEK 308
RDVSGEGVQQALLK++EGTV NVP P G RKHP+ + I IDTK+ILFICGGAF GLEK
Sbjct: 199 TRDVSGEGVQQALLKIIEGTVANVP-PQGG-RKHPQQETIAIDTKNILFICGGAFEGLEK 256
Query: 309 TISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
IS+R S+IGFGA V+ + D L+ +L + D + YGLIPEFIGR PI
Sbjct: 257 IISQRTNVSAIGFGADVKD--KNNQKIDELLQQALPQ-----DFIKYGLIPEFIGRVPIN 309
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
VSL+ L ED ++++L EPKN+L +QY+ +F M+ VKL F DDALR IAKK++ + TGARG
Sbjct: 310 VSLNELTEDDMIRILKEPKNSLTKQYQALFKMDGVKLFFEDDALREIAKKSIERKTGARG 369
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
LRA++E+++ + M+ +P ++ + V KE V
Sbjct: 370 LRAIVESVMMDYMYHVP----SDETITEITVTKEMV 401
>gi|407691667|ref|YP_006816456.1| ATP-dependent protease ATP-binding subunit ClpX [Actinobacillus
suis H91-0380]
gi|407387724|gb|AFU18217.1| ATP-dependent protease ATP-binding subunit ClpX [Actinobacillus
suis H91-0380]
Length = 419
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 199/402 (49%), Positives = 258/402 (64%), Gaps = 50/402 (12%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
++PTP EI LDE+VIGQE AKK AVYNHYKR+ ++
Sbjct: 63 NVPTPHEIHAHLDEYVIGQEHAKKV---------------LSVAVYNHYKRLRNAL---- 103
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
SG K N VEL KSN+LL+GPTGSGKTLLA+TLAR +NVP
Sbjct: 104 -------------SGHKETNG-------VELGKSNILLIGPTGSGKTLLAETLARRLNVP 143
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LTQAGYVGED E+V+ KLL DFD E A+RGIV+IDE+DKI K+ES +
Sbjct: 144 FAVADATTLTQAGYVGEDVENVIQKLLMKCDFDAEQAERGIVFIDEIDKITRKSESPSIT 203
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGTV N I G RKHP+G+ IP+DT ILFICGGAF GL+K
Sbjct: 204 RDVSGEGVQQALLKLIEGTVAN--INPQGSRKHPKGETIPVDTSKILFICGGAFAGLDKL 261
Query: 310 ISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
+ R + IGFGA ++ + LT+ L + V+ DLV +GLIPE IGR P++
Sbjct: 262 VEARTNKQGGIGFGAELKKDKEREDLTE------LFKQVEPEDLVKFGLIPELIGRLPVV 315
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
L L+E+ L+Q+L EPKNA+ +QY+ +F M V+L FT DAL IA+K++++ TGARG
Sbjct: 316 TPLQELDEEALIQILTEPKNAIIKQYQALFQMEGVELKFTKDALIAIAQKSISRKTGARG 375
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++EN+L + M+ +P K +V V + K V + D P
Sbjct: 376 LRSIVENLLLDTMYNLPTLK-AEKNVKKVTIGKGCVENGDKP 416
>gi|239831861|ref|ZP_04680190.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ochrobactrum
intermedium LMG 3301]
gi|444308444|ref|ZP_21144089.1| ATP-dependent protease ATP-binding subunit ClpX [Ochrobactrum
intermedium M86]
gi|239824128|gb|EEQ95696.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ochrobactrum
intermedium LMG 3301]
gi|443488027|gb|ELT50784.1| ATP-dependent protease ATP-binding subunit ClpX [Ochrobactrum
intermedium M86]
Length = 424
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 191/375 (50%), Positives = 253/375 (67%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI LD++VIGQ+ AK+ AV+NHYKR+ H S
Sbjct: 65 VPTPQEIMAVLDDYVIGQKDAKRV---------------LSVAVHNHYKRLAHQS----- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+N +I EL KSN+LL+GPTG GKT LA+TLARI++VPF
Sbjct: 105 ----------------------KNSDI-ELAKSNILLVGPTGCGKTYLAQTLARIIDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 202 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V++ D + ++ DL+ +GLIPEF+GR P++ +
Sbjct: 260 SARGEKTSIGFGATVKS-------VDERRIGDVFRELEPEDLLKFGLIPEFVGRLPVIAT 312
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ D LVQ+L EPKNAL +QY+++F M NV+L F DDALR IA KA+ + TGARGLR
Sbjct: 313 LEDLDVDALVQILTEPKNALVKQYQRLFDMENVELSFHDDALRAIANKAVERKTGARGLR 372
Query: 431 ALLENILTEAMFEIP 445
+++E IL + MFE+P
Sbjct: 373 SIMEKILLDTMFELP 387
>gi|421618979|ref|ZP_16059945.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri KOS6]
gi|409779071|gb|EKN58747.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri KOS6]
Length = 426
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 257/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQERAKK IL AVYNHYKR+ ++E
Sbjct: 65 LPAPKEISGILDQYVIGQERAKK-----IL----------AVAVYNHYKRLNQRDKKEE- 108
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 109 ---------------------------VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFAGLEKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + +A L +V+ DLV +GLIPEF+GR P++ +
Sbjct: 260 QGRSTRGGIGFNAEVRSKDPGKKIGEA------LRAVEPDDLVKFGLIPEFVGRLPVIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F + V L F DAL+ +A +A+ + TGARGLR
Sbjct: 314 LDELDEAALIQILTEPKNALTKQYAKLFELEGVDLEFRSDALKAVAHRALERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP K V+ V++D+ + P
Sbjct: 374 SILEGVLLDTMYEIPSQK----DVSKVVIDESVIEGTSQP 409
>gi|410618479|ref|ZP_11329424.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
polaris LMG 21857]
gi|410162021|dbj|GAC33562.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
polaris LMG 21857]
Length = 425
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 197/402 (49%), Positives = 263/402 (65%), Gaps = 57/402 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTPKEI LD++VIGQE AKK AVYNHYKR+
Sbjct: 64 ELPTPKEIHSHLDDYVIGQEHAKKV---------------LSVAVYNHYKRL-------- 100
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
++G+ + + VEL KSN+LLMGPTGSGKTLLA+TLAR+++VP
Sbjct: 101 ----------------RNGDVH----DGVELGKSNILLMGPTGSGKTLLAETLARLLDVP 140
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
FT+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ +
Sbjct: 141 FTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSIT 200
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K
Sbjct: 201 RDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKV 258
Query: 310 ISERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I +R + IGFG ++ + + LL+ V+ DLV YGLIPEFIGR P+L
Sbjct: 259 IEQRAHTGTGIGFGTAIK------DINNKAKEGELLKKVEPEDLVKYGLIPEFIGRLPVL 312
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
SL L+ED L+Q+L EPKN+L +QY +F++ +L F +DAL+ IAKKAM++ TGARG
Sbjct: 313 TSLEELSEDALIQILREPKNSLTKQYAALFALEGTELEFREDALQAIAKKAMSRKTGARG 372
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E +L + M+E+P S+V V+VD+ + P
Sbjct: 373 LRSIVEAVLLDTMYELP----SMSNVCKVVVDETVIRGESKP 410
>gi|71281243|ref|YP_270451.1| ATP-dependent protease ATP-binding subunit ClpX [Colwellia
psychrerythraea 34H]
gi|123631419|sp|Q47XL9.1|CLPX_COLP3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|71146983|gb|AAZ27456.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Colwellia
psychrerythraea 34H]
Length = 424
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 258/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+P EI + LDE+VIGQ+ AKK AVYNHYKR+
Sbjct: 65 LPSPIEIRESLDEYVIGQDHAKKV---------------LAVAVYNHYKRLR-------- 101
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N +N +EL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 102 --------------------NGDNHNGIELGKSNILLIGPTGSGKTLLAQTLARLLDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K +
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVV 259
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR + LTD L V+ DLV YGLIPEFIGR P+L
Sbjct: 260 EQRNHTGTGIGFGAEVRGKDQEISLTDRLA------DVEPQDLVKYGLIPEFIGRLPVLA 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+E L+Q+L EPKNAL +Q+ +F M NV+L F DAL IA+KAM + TGARGL
Sbjct: 314 TLRELDEAALIQILQEPKNALTKQFTALFDMENVELEFRSDALHAIARKAMDRKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E +L + M+E+P + +V+ ++VD+ + P
Sbjct: 374 RSIVEAVLLDTMYELPSME----NVSKIVVDENTIKGESKP 410
>gi|374335522|ref|YP_005092209.1| ATP-dependent protease ATP-binding subunit ClpX [Oceanimonas sp.
GK1]
gi|372985209|gb|AEY01459.1| ATP-dependent protease ATP-binding subunit ClpX [Oceanimonas sp.
GK1]
Length = 426
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 194/395 (49%), Positives = 259/395 (65%), Gaps = 57/395 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQ+ AKK AVYNHYKR+
Sbjct: 66 LPTPHEIRAHLDDYVIGQDHAKKV---------------LAVAVYNHYKRLR-------- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 103 --------------------NATSTDGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K +
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVV 260
Query: 311 SERR-QDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA V+A + L S + V+ DLV YGLIPEFIGR P++
Sbjct: 261 EQRMDHGTGIGFGAEVKARDQKASL------SEIFTRVEPEDLVKYGLIPEFIGRLPVVA 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+ED LVQ+L EPKNAL +QY +F++ +V+L F DDALR IA+KAM + TGARGL
Sbjct: 315 TLTELDEDALVQILSEPKNALTKQYAALFALEDVELEFRDDALRSIARKAMERKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
R+++E +L + M+++P V+ V++D+ +
Sbjct: 375 RSIVEAVLLDTMYDLP----SMDDVSKVVIDETVI 405
>gi|397676239|ref|YP_006517777.1| ATP-dependent Clp protease ATP-binding subunit clpX [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395396928|gb|AFN56255.1| ATP-dependent Clp protease ATP-binding subunit clpX [Zymomonas
mobilis subsp. mobilis ATCC 29191]
Length = 422
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 192/403 (47%), Positives = 262/403 (65%), Gaps = 57/403 (14%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
R +G+ +PTP+EIC LD++VIGQ +AK+ AV+NHYK
Sbjct: 52 TRGALHKGDGSVPTPQEICTILDQYVIGQSKAKRV---------------LSVAVHNHYK 96
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
R+ H D VEL KSN+LL+GPTG GKTLLA
Sbjct: 97 RLNHGG----------------------------KDADVELAKSNILLIGPTGCGKTLLA 128
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+TLAR +VPFT+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI
Sbjct: 129 ETLARTFDVPFTMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKI 188
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K+++ + RDVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT +ILFIC
Sbjct: 189 TRKSDNPSITRDVSGEGVQQALLKLMEGTTASVP-PQGG-RKHPQQEFLQVDTTNILFIC 246
Query: 300 GGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIP 359
GGAF GL++ I++R + SIGFGA V A D T +L+ + DL+ +GLIP
Sbjct: 247 GGAFAGLDRIIADRLEGKSIGFGAHVAA-------PDERRTGEILQECEPEDLLKFGLIP 299
Query: 360 EFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKA 419
EF+GR P+L +L L++ LV++L EPKNAL +QY+K+F + + KL FT++AL IAKK
Sbjct: 300 EFVGRLPVLATLEDLDQSALVRILTEPKNALVKQYQKLFELEDAKLEFTEEALAAIAKKG 359
Query: 420 MAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKE 462
+ + TGARGLR++LE IL + MFE+P + V+ ++VDK+
Sbjct: 360 IERKTGARGLRSILEGILLDTMFELPSLE----GVSEIIVDKD 398
>gi|332798602|ref|YP_004460101.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Tepidanaerobacter acetatoxydans Re1]
gi|438001583|ref|YP_007271326.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Tepidanaerobacter acetatoxydans Re1]
gi|332696337|gb|AEE90794.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Tepidanaerobacter acetatoxydans Re1]
gi|432178377|emb|CCP25350.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Tepidanaerobacter acetatoxydans Re1]
Length = 421
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 193/401 (48%), Positives = 266/401 (66%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P P EI LD++V+GQE+AKK+ AVYNHYKRI + +
Sbjct: 60 DIPKPHEIKDILDQYVVGQEQAKKT---------------LSVAVYNHYKRINYQN---- 100
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+D VEL+KSN++++GPTGSGKTLLA+TLARI+NVP
Sbjct: 101 ------KIDD------------------VELQKSNIVMLGPTGSGKTLLAQTLARILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A+RGIVYIDE+DKI K+++ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAERGIVYIDEIDKIARKSDNPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFICGGAF G+
Sbjct: 197 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFEGIGDI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R SIGF A +++ + +L+ + DL+ YG+IPEF+GR P++V
Sbjct: 255 IQNRIGKKSIGFEAEIQSQEQKN-------IGEILKHLMPEDLLKYGMIPEFVGRLPVIV 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+LSAL+E+ L+++L EPKNAL +QY+K+F M+N +L FTDDAL +IA++A+ + TGARGL
Sbjct: 308 TLSALDENALIKILKEPKNALVKQYQKLFEMDNSQLEFTDDALMVIAQEAIRRKTGARGL 367
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA+LE ++ + M+E+P + + ++ KE V + + P
Sbjct: 368 RAILEEVMLDIMYELPH----RNDIAKCVITKEVVLNREEP 404
>gi|238926239|ref|ZP_04657999.1| ATP dependent protease ATP-binding subunit [Selenomonas flueggei
ATCC 43531]
gi|238885919|gb|EEQ49557.1| ATP dependent protease ATP-binding subunit [Selenomonas flueggei
ATCC 43531]
Length = 421
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 193/376 (51%), Positives = 253/376 (67%), Gaps = 52/376 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
++P PKEI LD++VIGQ+ AKKS AVYNHYKRI+
Sbjct: 60 EIPKPKEIRHILDQYVIGQDEAKKS---------------LSVAVYNHYKRIHA------ 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
G G +E VEL KSNVL++GPTGSGKTLLA+TLARI+NVP
Sbjct: 99 ------------GQG---------KNEDVELRKSNVLMIGPTGSGKTLLAQTLARILNVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E AQRGI+YIDE+DKI K+E+ +
Sbjct: 138 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAQRGIIYIDEIDKIARKSENPSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT +VP P G RKHP+ + + IDT +ILFICGG+F GLE+
Sbjct: 198 RDVSGEGVQQALLKILEGTTASVP-PQGG-RKHPQQELLQIDTTNILFICGGSFDGLEEI 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R +GFGA VR+ R + L + DL+ GLIPEFIGR P++V
Sbjct: 256 IESRLGKKQMGFGAEVRSRRRVK-------IGASLSKIIPEDLMKNGLIPEFIGRLPVVV 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L++L+ED LV++L EPKNAL +Q++K+ ++ V+L F D+AL LIAK+A+ TGARGL
Sbjct: 309 TLNSLDEDALVRILTEPKNALIKQFQKLLELDGVRLTFEDEALHLIAKEALTHKTGARGL 368
Query: 430 RALLENILTEAMFEIP 445
R+++ENI+ M+E+P
Sbjct: 369 RSIVENIMRNVMYEVP 384
>gi|427706273|ref|YP_007048650.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Nostoc sp. PCC
7107]
gi|427358778|gb|AFY41500.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Nostoc sp. PCC
7107]
Length = 446
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 198/428 (46%), Positives = 271/428 (63%), Gaps = 50/428 (11%)
Query: 47 ESNGIESES--ETENGNRNRNSEGNI---DLPTPKEICKGLDEFVIGQERAKKSHIFCIL 101
++NG+ + ++E + RN N+ +P P+EI K LDE VIGQE AKK
Sbjct: 49 DTNGVAPQPAPKSEAPQKRRNRSANLSFNQIPKPREIKKYLDEHVIGQEEAKKV------ 102
Query: 102 VDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVEL 161
AVYNHYKR+ +IL S GN D+ VEL
Sbjct: 103 ---------LSVAVYNHYKRL-----------------AILQS---KGNGKNGGDDSVEL 133
Query: 162 EKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAAD 221
+KSN+LL+GPTG GKTLLA+TLA+I++VPF + DAT LT+AGYVGED E++L +LL AD
Sbjct: 134 QKSNILLIGPTGCGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLLQVAD 193
Query: 222 FDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPR 280
DVE AQRGI+YIDE+DKI K+E+ + RDVSGEGVQQALLKMLEGT+ NVP P G R
Sbjct: 194 LDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTIANVP-PQGG-R 251
Query: 281 KHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVT 340
KHP D I IDT +ILF+CGGAFVGLEK + +R SIGF P + D
Sbjct: 252 KHPYQDCIQIDTSNILFVCGGAFVGLEKVVEQRAGKKSIGFVQPGEGQSKEKRAAD---- 307
Query: 341 SSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSM 400
+L +++ DLV +G+IPEFIGR P++ + L+E+ L+ +L +P++AL +QY+K+ M
Sbjct: 308 --VLHNLEPDDLVKFGMIPEFIGRIPMVAVVDPLDEEALMAILTQPRSALVKQYQKLLKM 365
Query: 401 NNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETK-IGTSSVNAVLV 459
+NV+L F DALR IA++A + TGAR LR ++E ++ + M+E+P K + +V +V
Sbjct: 366 DNVQLDFKQDALRAIAQEAYRRKTGARALRGIVEELMLDVMYELPSRKDVTRCTVTREMV 425
Query: 460 DKEAVGSV 467
+K + +
Sbjct: 426 EKRSTAEL 433
>gi|410612508|ref|ZP_11323585.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
psychrophila 170]
gi|410167849|dbj|GAC37474.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
psychrophila 170]
Length = 425
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 196/402 (48%), Positives = 258/402 (64%), Gaps = 57/402 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLPTPKEI LD++VIGQE AKK AVYNHYKR+ + +
Sbjct: 64 DLPTPKEIHAHLDDYVIGQEHAKKV---------------LSVAVYNHYKRLRNGDVH-- 106
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
E VEL KSN+LLMGPTGSGKTLLA+TLAR+++VP
Sbjct: 107 --------------------------EGVELGKSNILLMGPTGSGKTLLAETLARLLDVP 140
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
FT+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ +
Sbjct: 141 FTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSIT 200
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K
Sbjct: 201 RDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKV 258
Query: 310 ISERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I +R + IGF + ++ ++ L+ V+ DLV YGLIPEFIGR P+L
Sbjct: 259 IEQRAHTGTGIGFASEIKNT------SNKSQEGEWLKKVEPEDLVKYGLIPEFIGRLPVL 312
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
L L+ED LVQ+L EPKN+L +QY +F M N +L F +DAL+ IAKKAM + TGARG
Sbjct: 313 TCLEELSEDALVQILREPKNSLTKQYSALFGMENTELEFREDALQAIAKKAMQRKTGARG 372
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E +L + M+++P ++V+ V+VD+ + P
Sbjct: 373 LRSIVEAVLLDTMYDLP----SMTNVSKVVVDETVIRGESKP 410
>gi|404328535|ref|ZP_10968983.1| ATP-dependent protease ATP-binding subunit ClpX [Sporolactobacillus
vineae DSM 21990 = SL153]
Length = 424
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 192/376 (51%), Positives = 254/376 (67%), Gaps = 54/376 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P P+EIC LD++VIGQ+ AKK+ AVYNHYKRI
Sbjct: 60 DIPKPQEICSILDDYVIGQDEAKKN---------------LSVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N + D+ VEL KSN++++GPTGSGKTLLA+TLARI+NVP
Sbjct: 97 -------------------NTKQKPDD-VELSKSNIMMLGPTGSGKTLLAQTLARILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A++GI+YIDE+DKI K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIIYIDEIDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFICGGAF G+E+
Sbjct: 197 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFDGIEQI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R IGFGA +++ + + L++V DL+ +GLIPEFIGR P++
Sbjct: 255 IKRRLGKQVIGFGAGIKSQ--------EIDRDNALKNVLPEDLLKFGLIPEFIGRLPVIT 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+ED LV +L +PKNAL +QYKK+ +++V L FTDDALR IAK A+A+ TGARGL
Sbjct: 307 TLKQLDEDALVDILTKPKNALIKQYKKLMELDDVTLEFTDDALRAIAKLAIARKTGARGL 366
Query: 430 RALLENILTEAMFEIP 445
R+++E++ + M+EIP
Sbjct: 367 RSIIESMTLDLMYEIP 382
>gi|383454038|ref|YP_005368027.1| ATP-dependent protease ATP-binding subunit ClpX [Corallococcus
coralloides DSM 2259]
gi|380732367|gb|AFE08369.1| ATP-dependent protease ATP-binding subunit ClpX [Corallococcus
coralloides DSM 2259]
Length = 427
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 198/414 (47%), Positives = 261/414 (63%), Gaps = 57/414 (13%)
Query: 58 ENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYN 117
E +R + + +P P EI LDE+V+GQERAKK+ AV+N
Sbjct: 51 EEIDREETKDTKLRIPRPSEIKAVLDEYVVGQERAKKT---------------LSVAVHN 95
Query: 118 HYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKT 177
HYKRI V D+ VEL+KSN+LL+GPTGSGKT
Sbjct: 96 HYKRI---------------------------ESKVAMDD-VELQKSNILLLGPTGSGKT 127
Query: 178 LLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEV 237
LLA+TLARI+NVPFTI DAT LT+AGYVGED E+++ LL AAD D+E AQRGIVYIDE+
Sbjct: 128 LLAQTLARILNVPFTIADATCLTEAGYVGEDVENIIVNLLQAADHDIERAQRGIVYIDEI 187
Query: 238 DKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDIL 296
DKI K+E+ + RDVSGEGVQQALLK++EGTV NV P G RKHP+ + + +DT +IL
Sbjct: 188 DKIARKSENPSITRDVSGEGVQQALLKIIEGTVANV--PPKGGRKHPQQEFLQVDTTNIL 245
Query: 297 FICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYG 356
FICGGAF GLE+ I R S+GFGA +++ + S LL+ V+ DL+ +G
Sbjct: 246 FICGGAFGGLEQVIERRLGGRSLGFGAEIQSRKQRN-------LSELLKHVEPEDLLKFG 298
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
+IPEFIGR PI+ +L L+E LV +L EPKNAL +QY+K+F ++ V L FTD AL+ IA
Sbjct: 299 MIPEFIGRLPIITALEELDEGALVNILGEPKNALTKQYRKLFELDGVSLKFTDGALKAIA 358
Query: 417 KKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+A+ + GARGLR++LE + + M+EIP K + VL+ +E + P
Sbjct: 359 SEAIRRKAGARGLRSILETAMLDVMYEIPSRK----TAREVLISEEVILKKSEP 408
>gi|168186117|ref|ZP_02620752.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum C str. Eklund]
gi|169296071|gb|EDS78204.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum C str. Eklund]
Length = 431
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 195/394 (49%), Positives = 263/394 (66%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKRI
Sbjct: 60 LPKPSEIKNYLDDYVIGQDSAKKA---------------LAVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N +V+ D+ VEL+KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 96 ------------------NSDVDVDD-VELQKSNILLLGPTGSGKTLLAQTLARLLNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ AD+D+E A+RGI+YIDE+DKI K+E+ + R
Sbjct: 137 AIADATTLTEAGYVGEDVENILLKLIQNADYDIEKAERGIIYIDEIDKIARKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV +VP P G RKHP + I I+T +ILFICGGAF GL+K I
Sbjct: 197 DVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQINTSNILFICGGAFDGLDKII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + SS+GFG+ V++ D LL+ DL+ +GLIPEFIGR PI+V+
Sbjct: 255 EKRTRKSSLGFGSDVQSK-------DEKDIGELLKESVPEDLLKFGLIPEFIGRLPIMVT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L +L+ D LV++L EPKNAL +QYKK+ M+NV+L F D+AL+ IA +A+ + TGARGLR
Sbjct: 308 LQSLDNDALVKILKEPKNALVKQYKKLLLMDNVELEFEDEALKSIADEAIERKTGARGLR 367
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E + + MF+IP ++ V+++K+ +
Sbjct: 368 SIIEETMRDIMFDIP----SQFNIKKVIINKDTI 397
>gi|407802231|ref|ZP_11149073.1| ATP-dependent protease ATP-binding subunit ClpX [Alcanivorax sp.
W11-5]
gi|407023906|gb|EKE35651.1| ATP-dependent protease ATP-binding subunit ClpX [Alcanivorax sp.
W11-5]
Length = 435
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 191/375 (50%), Positives = 251/375 (66%), Gaps = 43/375 (11%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQERAKK AVYNHYKR+
Sbjct: 66 LPKPHEIKDTLDDYVIGQERAKKV---------------LSVAVYNHYKRLRSG------ 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
DS K+ + E +EL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 105 -------DS------KTVKGGGKKGEEIELGKSNILLIGPTGSGKTLLAETLARLLNVPF 151
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 152 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVERAQMGIVYIDEIDKISRKSDNPSITR 211
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 212 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSNILFICGGAFAGLEKII 269
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + IGF A V++ +T + L V+ DL+ +GLIPEFIGR P++ +
Sbjct: 270 RDRSEKGGIGFSAEVKSKDKTVNVGQTLA------DVEPEDLIKFGLIPEFIGRLPVIAT 323
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EP+NAL +QY ++F M V+L F +DALR +A KAM + TGARGLR
Sbjct: 324 LEELSEEALIQILTEPRNALTKQYGRLFDMEGVELDFREDALRAVAHKAMERKTGARGLR 383
Query: 431 ALLENILTEAMFEIP 445
++LEN+L + M+++P
Sbjct: 384 SILENVLLDTMYQVP 398
>gi|334128683|ref|ZP_08502564.1| ATP-dependent Clp protease ATP-binding subunit [Centipeda
periodontii DSM 2778]
gi|333386420|gb|EGK57634.1| ATP-dependent Clp protease ATP-binding subunit [Centipeda
periodontii DSM 2778]
Length = 421
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 257/401 (64%), Gaps = 56/401 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI LD++VIGQ+ AKKS AVYNHYKRI
Sbjct: 60 DVPKPKEIRHILDQYVIGQDEAKKS---------------LSVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N +E VEL KSN+L++GPTGSGKTLLA+TLARI+NVP
Sbjct: 97 -------------------NVGQGKNEDVELRKSNILMLGPTGSGKTLLAQTLARILNVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E AQRGI+YIDE+DKI K+E+ +
Sbjct: 138 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAQRGIIYIDEIDKIARKSENPSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT +VP P G RKHP+ + + IDT +ILFICGGAF G+E+
Sbjct: 198 RDVSGEGVQQALLKILEGTTASVP-PQGG-RKHPQQELLQIDTTNILFICGGAFDGIEEI 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R +GFGA VR+ R L V DL+ GLIPEFIGR P++V
Sbjct: 256 IESRLGKKQMGFGAEVRSKKRVS-------VGESLSKVIPEDLMKNGLIPEFIGRLPVVV 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L++L+E LV++L EPKNAL +Q++K+ ++ V+L F DDAL LIAK+A+ TGARGL
Sbjct: 309 TLNSLDEAALVRILTEPKNALVKQFQKLLELDGVRLTFEDDALHLIAKEALTHKTGARGL 368
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E I+ M+E+P + V A V K+ V + P
Sbjct: 369 RSIIEGIMRNVMYEVPSIQ----GVTACQVTKDVVANHSDP 405
>gi|165976698|ref|YP_001652291.1| ATP-dependent protease ATP-binding subunit ClpX [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|165876799|gb|ABY69847.1| ATP-dependent Clp protease, ATP-binding subunit [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
Length = 378
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 199/402 (49%), Positives = 258/402 (64%), Gaps = 50/402 (12%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
++PTP EI LDE+VIGQE AKK AVYNHYKR+ ++
Sbjct: 22 NVPTPHEINAHLDEYVIGQEHAKKV---------------LSVAVYNHYKRLRNAL---- 62
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
SG K N VEL KSN+LL+GPTGSGKTLLA+TLAR +NVP
Sbjct: 63 -------------SGHKETNG-------VELGKSNILLIGPTGSGKTLLAETLARRLNVP 102
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LTQAGYVGED E+V+ KLL DFD E A+RGIV+IDE+DKI K+ES +
Sbjct: 103 FAVADATTLTQAGYVGEDVENVIQKLLMKCDFDAEQAERGIVFIDEIDKITRKSESPSIT 162
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGTV N I G RKHP+G+ IP+DT ILFICGGAF GL+K
Sbjct: 163 RDVSGEGVQQALLKLIEGTVAN--INPQGSRKHPKGETIPVDTSKILFICGGAFAGLDKI 220
Query: 310 ISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
+ R + IGFGA ++ + LT+ L + V+ DLV +GLIPE IGR P++
Sbjct: 221 VEARSNKQGGIGFGAELKKDKEREDLTE------LFKQVEPEDLVKFGLIPELIGRLPVV 274
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
L L+E+ L+Q+L EPKNA+ +QY+ +F M V+L FT +AL IA+K++++ TGARG
Sbjct: 275 TPLQELDEEALIQILTEPKNAIIKQYQALFQMEGVELKFTKEALIAIAQKSISRKTGARG 334
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++EN+L + M+ +P K +V V V K V + D P
Sbjct: 335 LRSIVENLLLDTMYNLPTLK-AEKNVKKVTVGKGCVENGDKP 375
>gi|149186484|ref|ZP_01864796.1| ATP-dependent protease ATP-binding subunit [Erythrobacter sp.
SD-21]
gi|148829711|gb|EDL48150.1| ATP-dependent protease ATP-binding subunit [Erythrobacter sp.
SD-21]
Length = 418
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 194/395 (49%), Positives = 260/395 (65%), Gaps = 57/395 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+PTPKEI + L+++VIGQ+RAK+ AV+NHYKR+ H
Sbjct: 63 DVPTPKEIFETLNDYVIGQDRAKRV---------------LSVAVHNHYKRLKH------ 101
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
G K+G+ VEL KSN+LL+GPTG GKTLLA+TLAR +VP
Sbjct: 102 --------------GGKAGD--------VELAKSNILLVGPTGCGKTLLAQTLARTFDVP 139
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
FT+ DAT LT+AGYVGED E+++ KLL A+D++VE AQ GIVYIDE+DKI KAE+ +
Sbjct: 140 FTMADATTLTEAGYVGEDVENIILKLLQASDYNVEKAQHGIVYIDEIDKITRKAENPSIT 199
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGT +V P G RKHP+ + + +DT +ILFICGGAF GLEK
Sbjct: 200 RDVSGEGVQQALLKLMEGTTASV--PPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKI 257
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I++R Q SIGFGA V D LLE + DL+ +GLIPEF+GR P++
Sbjct: 258 IADRLQKRSIGFGAHVAD-------PDKRRIGELLEKGEPEDLLKFGLIPEFVGRLPVIA 310
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+ D L+ +L EPKNAL +QY K+F + NV+L F +DAL+ IA+KA+A+ TGARGL
Sbjct: 311 TLRDLDTDALITILTEPKNALCKQYAKLFELENVELTFQEDALKKIAEKAIARKTGARGL 370
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
R+++E IL + MF++P+ V +++D + V
Sbjct: 371 RSIVEGILLDTMFDLPD----MDGVTEIVIDADVV 401
>gi|226944448|ref|YP_002799521.1| ATP-dependent protease ATP-binding subunit ClpX [Azotobacter
vinelandii DJ]
gi|226719375|gb|ACO78546.1| ATP-dependent Clp protease, ATP binding subunit ClpX [Azotobacter
vinelandii DJ]
Length = 426
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 254/400 (63%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQERAKK AVYNHYKR+ + +
Sbjct: 65 LPAPKEISTILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQRDKKDD- 108
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 109 ---------------------------VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + +A L V+ DLV +GLIPEF+GR P++ +
Sbjct: 260 QNRSTKGGIGFNAEVRSPDVGKKIGEA------LRDVEPDDLVKFGLIPEFVGRLPVIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E LVQ+L EPKNAL +QY K+F M V+L F DALR +A +A+ + TGARGLR
Sbjct: 314 LDELDEAALVQILTEPKNALTKQYGKLFEMEGVELEFRPDALRAVALRALERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP S V+ V++D+ + P
Sbjct: 374 SILEGVLLDTMYEIP----SQSGVSKVVIDESVIAGASKP 409
>gi|405365023|ref|ZP_11026469.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Chondromyces
apiculatus DSM 436]
gi|397089588|gb|EJJ20497.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 427
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 199/426 (46%), Positives = 267/426 (62%), Gaps = 61/426 (14%)
Query: 58 ENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYN 117
E +R + + +P P EI LDE+VIGQERAKK+ AV+N
Sbjct: 51 EEIDREETKDTKLRIPRPSEIKAVLDEYVIGQERAKKT---------------LSVAVHN 95
Query: 118 HYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKT 177
HYKRI ++ VEL+KSN+LL+GPTGSGKT
Sbjct: 96 HYKRIESKVAMED----------------------------VELQKSNILLLGPTGSGKT 127
Query: 178 LLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEV 237
LLA+TLARI+NVPFTI DAT LT+AGYVGED E+++ LL AAD D+E AQRGIVYIDE+
Sbjct: 128 LLAQTLARILNVPFTIADATCLTEAGYVGEDVENIIVNLLQAADHDIERAQRGIVYIDEI 187
Query: 238 DKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDIL 296
DKI K+E+ + RDVSGEGVQQALLK++EGTV NV P G RKHP+ + + +DT +IL
Sbjct: 188 DKIARKSENPSITRDVSGEGVQQALLKLIEGTVANV--PPKGGRKHPQQEFLQVDTTNIL 245
Query: 297 FICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYG 356
FICGGAF GL++ I R S+GFGA V++ + LT+ LL+ V+ DL+ +G
Sbjct: 246 FICGGAFGGLDQVIERRMGGRSLGFGADVQSK-KQRSLTE------LLKHVEPEDLLKFG 298
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
+IPEFIGR PI+ +L L+E L+ +L +PKNAL +QY+K+F ++ V L FTD AL+ IA
Sbjct: 299 MIPEFIGRLPIITALEELDEAALINILNQPKNALTKQYRKLFELDGVTLKFTDGALKAIA 358
Query: 417 KKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKI 476
+A+ + GARGLR++LE+ + + M+EIP K + VL+ +E + P +
Sbjct: 359 NEAIRRKAGARGLRSILESAMLDVMYEIPSRK----TAREVLISEEVILRKSEP----VV 410
Query: 477 LHGDGE 482
LH E
Sbjct: 411 LHAQAE 416
>gi|345887723|ref|ZP_08838887.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bilophila sp.
4_1_30]
gi|345041510|gb|EGW45657.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bilophila sp.
4_1_30]
Length = 418
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 197/395 (49%), Positives = 263/395 (66%), Gaps = 53/395 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
L TP+EI LDE+VIGQ+ AKK IL AV+NHYKR++
Sbjct: 60 LLTPQEIKARLDEYVIGQDEAKK-----IL----------AVAVHNHYKRVF-------- 96
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
Y D++ GS + VELEKSN+LL+GP+GSGKTLLAKTLAR++ VPF
Sbjct: 97 -----YADALRGS------------DDVELEKSNILLVGPSGSGKTLLAKTLARVLRVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L +LL AD+D+EAA++GI+YIDE+DKI KA+ + R
Sbjct: 140 AIADATTLTEAGYVGEDVENILVQLLQNADYDLEAARKGIIYIDEIDKISRKADGPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT N IP G RKHP+ + I +DT +ILFI GGAF+GL+K +
Sbjct: 200 DVSGEGVQQALLKIIEGTEAN--IPPKGGRKHPQQEFIRMDTSNILFIVGGAFIGLDKIV 257
Query: 311 SERRQDSSIGFGAPVRANM-RTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + S+GFGA V RT G LLE V DLV +GLIPEF+GR P+L
Sbjct: 258 EQRMRGGSMGFGAKVETKKERTLG--------ELLEQVHPADLVQFGLIPEFVGRIPVLT 309
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+ L ED LV++L EPKNAL RQY+K+F ++NV L FT DALR IA +A+ + TGARGL
Sbjct: 310 HVDDLGEDDLVRILTEPKNALTRQYQKLFELDNVTLRFTSDALRAIAHRAIERKTGARGL 369
Query: 430 RALLENILTEAMFEIPETK-IGTSSVNAVLVDKEA 463
R ++E+++ + M+++P + +N +++K+A
Sbjct: 370 RNVMESVMLDIMYQLPSMPGVKECVINDAVIEKKA 404
>gi|408791426|ref|ZP_11203036.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Leptospira
meyeri serovar Hardjo str. Went 5]
gi|408462836|gb|EKJ86561.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Leptospira
meyeri serovar Hardjo str. Went 5]
Length = 426
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 205/413 (49%), Positives = 264/413 (63%), Gaps = 55/413 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P P EI K LD++VIGQE+AKK+ AVYNHYKRI+H+
Sbjct: 65 DIPKPTEIKKILDQYVIGQEQAKKA---------------LSVAVYNHYKRIFHNER--- 106
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
K+G+ VELEKSN++L+GPTGSGKTLLA+TLARI+ VP
Sbjct: 107 ----------------KAGD--------VELEKSNIMLIGPTGSGKTLLAQTLARILKVP 142
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DATALT+AGYVGED E+++ KL+ AD DV+ A+ GI+YIDE+DKI K++S +
Sbjct: 143 FAIVDATALTEAGYVGEDVENIILKLIQNADNDVKRAEMGIIYIDEIDKISRKSDSASIT 202
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGTV NVP P G RKHP + IP++TK+ILFICGGAFVGL
Sbjct: 203 RDVSGEGVQQALLKIIEGTVANVP-PQGG-RKHPHQEYIPVETKNILFICGGAFVGLSDI 260
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I +R SIGF + N + + + S++ V DL+ +GLIPEFIGR PI+
Sbjct: 261 IKQRVGVKSIGFHSNEIVNDKGRKIEEG---ESVVHHVIPDDLMKFGLIPEFIGRLPIIA 317
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L D L + EPKN+L +QY+KMF + NVKL FT+ A+ IA+ A+ + +GARGL
Sbjct: 318 TLDELTIDSLKSIFTEPKNSLLKQYQKMFDIENVKLKFTEAAIEAIAQTAIKRESGARGL 377
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGE 482
RA++E I+ E MF+IP K V V+V E V DAP IL GD E
Sbjct: 378 RAIVEEIMMELMFQIPSRK----DVLEVVVTDETVLKKDAP---ITILKGDIE 423
>gi|89900347|ref|YP_522818.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodoferax
ferrireducens T118]
gi|122479496|sp|Q21Y66.1|CLPX_RHOFD RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|89345084|gb|ABD69287.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodoferax
ferrireducens T118]
Length = 421
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 193/401 (48%), Positives = 259/401 (64%), Gaps = 55/401 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTP EI LD +VIGQE AK++ AVYNHYKR+ H K+
Sbjct: 64 ELPTPLEIKTNLDNYVIGQEPAKRT---------------LAVAVYNHYKRLRHQEKAKK 108
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+ VEL KSN+LL+GPTGSGKTLLA+TLAR+++VP
Sbjct: 109 --------------------------DDVELAKSNILLIGPTGSGKTLLAQTLARMLDVP 142
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LT+AGYVGED E+++ KLL + +++VE AQRGIVYIDE+DKI K+++ +
Sbjct: 143 FVMADATTLTEAGYVGEDVENIVLKLLQSCNYEVERAQRGIVYIDEIDKISRKSDNPSIT 202
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGT+ +VP P G RKHP D + +DT +ILFICGGAF GLEK
Sbjct: 203 RDVSGEGVQQALLKLIEGTMASVP-PQGG-RKHPNQDFVQVDTTNILFICGGAFSGLEKV 260
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R Q S +GFGA V++ + + + + V+ DL+ +GLIPE +GR P+L
Sbjct: 261 IDNRTQSSGMGFGATVKSKEQRS-------LTEVFKEVEPEDLIKFGLIPELVGRMPVLA 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+ED LVQ+L EPKNAL +QY K+ +M V L AL+ IAKKA+A+ TGARGL
Sbjct: 314 TLAELSEDALVQILTEPKNALVKQYSKLLAMEGVDLEIRPSALKAIAKKALARKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE L + MF++P TS+V+ V+VD+ + P
Sbjct: 374 RSILEQSLIDTMFDLP----NTSNVDKVVVDESTIDENKPP 410
>gi|374623545|ref|ZP_09696053.1| ATP-dependent protease ATP-binding subunit ClpX [Ectothiorhodospira
sp. PHS-1]
gi|373942654|gb|EHQ53199.1| ATP-dependent protease ATP-binding subunit ClpX [Ectothiorhodospira
sp. PHS-1]
Length = 424
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 197/390 (50%), Positives = 259/390 (66%), Gaps = 56/390 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI + LDE+VIGQERAKK IL AVYNHYKR+ + E
Sbjct: 65 LPRPHEIKQILDEYVIGQERAKK-----IL----------SVAVYNHYKRLEARGGKDE- 108
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 109 ---------------------------VELAKSNILLIGPTGSGKTLLAETLARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFI GGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFIVGGAFAGLEKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + IGF A V++ R G + ++ LL V+ DL+ +GLIPEF+GR P++ +
Sbjct: 260 RDRTEKGGIGFSAEVKS--RDSGQS----STQLLFGVEPEDLIKFGLIPEFVGRLPLVAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E LV++L EPKNAL +QY+K+F M V++ F +DALR +A+KAM + TGARGLR
Sbjct: 314 LEELDEAALVRILTEPKNALTKQYRKLFDMEGVEIEFREDALRAVARKAMERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVD 460
+LE +L + M+EIP + V+ V++D
Sbjct: 374 TILEQVLLDTMYEIPSVE----GVSKVVID 399
>gi|317486005|ref|ZP_07944860.1| ATP-dependent Clp protease [Bilophila wadsworthia 3_1_6]
gi|316922778|gb|EFV44009.1| ATP-dependent Clp protease [Bilophila wadsworthia 3_1_6]
Length = 418
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 197/395 (49%), Positives = 263/395 (66%), Gaps = 53/395 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
L TP+EI LDE+VIGQ+ AKK IL AV+NHYKR++
Sbjct: 60 LLTPQEIKARLDEYVIGQDEAKK-----IL----------AVAVHNHYKRVF-------- 96
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
Y D++ G D+ VELEKSN+LL+GP+GSGKTLLAKTLAR++ VPF
Sbjct: 97 -----YADALKG------------DDGVELEKSNILLVGPSGSGKTLLAKTLARVLRVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L +LL AD+D+EAA++GI+YIDE+DKI KA+ + R
Sbjct: 140 AIADATTLTEAGYVGEDVENILVQLLQNADYDLEAARKGIIYIDEIDKISRKADGPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT N IP G RKHP+ + I +DT +ILFI GGAF+GL+K +
Sbjct: 200 DVSGEGVQQALLKIIEGTEAN--IPPKGGRKHPQQEFIRMDTSNILFIVGGAFIGLDKIV 257
Query: 311 SERRQDSSIGFGAPVRANM-RTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + S+GFGA V RT G LLE V DLV +GLIPEF+GR P+L
Sbjct: 258 EQRMRGGSMGFGAKVETKKERTLG--------ELLEQVHPADLVQFGLIPEFVGRIPVLT 309
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+ L ED LV++L EPKNAL RQY+K+F ++NV L FT DALR IA +A+ + TGARGL
Sbjct: 310 HVDDLGEDDLVRILTEPKNALTRQYQKLFELDNVTLRFTSDALRAIAHRAIERKTGARGL 369
Query: 430 RALLENILTEAMFEIPETK-IGTSSVNAVLVDKEA 463
R ++E+++ + M+++P + +N +++K+A
Sbjct: 370 RNVMESVMLDIMYQLPSMPGVKECVINDAVIEKKA 404
>gi|300856722|ref|YP_003781706.1| ATP-dependent Clp protease ATP-binding subunit [Clostridium
ljungdahlii DSM 13528]
gi|300436837|gb|ADK16604.1| ATP-dependent Clp protease, ATP-binding subunit [Clostridium
ljungdahlii DSM 13528]
Length = 429
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 195/396 (49%), Positives = 259/396 (65%), Gaps = 57/396 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P P EI LD++VIGQE AKKS AVYNHYKRI
Sbjct: 60 IPKPVEIKNYLDQYVIGQEDAKKS---------------LSVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N N +ND+ VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF
Sbjct: 96 ------------------NSNNQNDD-VELQKSNILLLGPTGSGKTLLAQTLAKFLNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ AD+D+E A+ GIVYIDE+DKI K+E+ + R
Sbjct: 137 AIADATTLTEAGYVGEDVENILLKLIQNADYDIERAEHGIVYIDEIDKIARKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV +VP P G RKHP + I I+T +ILFICGGAF G++ I
Sbjct: 197 DVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQINTTNILFICGGAFDGIDNII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R + S++GFGA +++ LL+ + GDL+ +GLIPEF+GR PI+V+
Sbjct: 255 ERRTRVSTLGFGAEIQSKKEKD-------IGKLLKDIMPGDLLKFGLIPEFVGRIPIIVT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L AL+ LV++L EPKNAL +QYKK+F ++V+L F +DAL I+ +A+ +NTGARGLR
Sbjct: 308 LEALDRSALVRILKEPKNALIKQYKKLFEFDDVELEFKEDALEAISDEALKRNTGARGLR 367
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
A++E + + MF+IP + V++DK AV +
Sbjct: 368 AIIEETMKDVMFDIP----SKEEIAKVIIDKNAVDT 399
>gi|108761752|ref|YP_630244.1| ATP-dependent protease ATP-binding subunit ClpX [Myxococcus xanthus
DK 1622]
gi|8134368|sp|Q9X5N1.1|CLPX_MYXXA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|4838464|gb|AAD31003.1|AF127082_2 ATP-dependent protease ATPase subunit ClpX [Myxococcus xanthus
DZF1]
gi|108465632|gb|ABF90817.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Myxococcus
xanthus DK 1622]
Length = 427
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 202/437 (46%), Positives = 272/437 (62%), Gaps = 61/437 (13%)
Query: 58 ENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYN 117
E +R + + +P P EI LDE+VIGQERAKK+ AV+N
Sbjct: 51 EEIDREETKDTKLRIPRPSEIKAVLDEYVIGQERAKKT---------------LSVAVHN 95
Query: 118 HYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKT 177
HYKRI ++ VEL+KSN+LL+GPTGSGKT
Sbjct: 96 HYKRIESKVAMED----------------------------VELQKSNILLLGPTGSGKT 127
Query: 178 LLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEV 237
LLA+TLARI+NVPFTI DAT LT+AGYVGED E+++ LL AAD D+E AQRGIVYIDE+
Sbjct: 128 LLAQTLARILNVPFTIADATCLTEAGYVGEDVENIIVNLLQAADHDIERAQRGIVYIDEI 187
Query: 238 DKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDIL 296
DKI K+E+ + RDVSGEGVQQALLK++EGTV NV P G RKHP+ + + +DT +IL
Sbjct: 188 DKIARKSENPSITRDVSGEGVQQALLKLIEGTVANV--PPKGGRKHPQQEFLQVDTTNIL 245
Query: 297 FICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYG 356
FICGGAF GL++ I R S+GFGA V++ + LT+ LL+ V+ DL+ +G
Sbjct: 246 FICGGAFGGLDQVIERRMGGRSLGFGADVQSK-KQRSLTE------LLKHVEPEDLLKFG 298
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
+IPEFIGR PI+ +L L+E L+ +L +PKNAL +QY+K+F ++ V L FTD AL+ IA
Sbjct: 299 MIPEFIGRLPIITALEELDEAALINILNQPKNALTKQYRKLFELDGVTLKFTDGALKAIA 358
Query: 417 KKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKI 476
+A+ + GARGLR++LE+ + + M+EIP K + VL+ +E + P +
Sbjct: 359 NEAIRRKAGARGLRSILESAMLDVMYEIPSRK----TAREVLISEEVILKKSEP----VV 410
Query: 477 LHGDGELERVLHETKSA 493
LH E E + +SA
Sbjct: 411 LHAQPEKEAAEPKKESA 427
>gi|197105277|ref|YP_002130654.1| ATP-dependent protease ATP-binding subunit ClpX [Phenylobacterium
zucineum HLK1]
gi|238690156|sp|B4RCN8.1|CLPX_PHEZH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|196478697|gb|ACG78225.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Phenylobacterium zucineum HLK1]
Length = 420
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 193/375 (51%), Positives = 253/375 (67%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEI + LD++VIGQ+ AKK AV+NHYKR+ H++
Sbjct: 63 VPTPKEIREVLDDYVIGQDHAKKV---------------LSVAVHNHYKRLNHATKN--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL K+N+LL+GPTG+GKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELGKANILLIGPTGTGKTLLAQTLARIIDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 140 TVADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R Q +SIGFGA V D T + V+ DL+ +GLIPEFIGR P++ +
Sbjct: 258 SARGQGTSIGFGAKV-------ADPDERRTGEIFRQVEPDDLLRFGLIPEFIGRLPVIAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E LV++L EPKNA +QY ++F M NV L FT+DAL +A+KA+ + TGARGLR
Sbjct: 311 LDDLDEKALVKILTEPKNAFVKQYVRLFEMENVGLTFTEDALMAVARKAIQRKTGARGLR 370
Query: 431 ALLENILTEAMFEIP 445
++LE +L + M+E+P
Sbjct: 371 SILEGVLLDTMYELP 385
>gi|127513435|ref|YP_001094632.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella loihica
PV-4]
gi|166215203|sp|A3QFX5.1|CLPX_SHELP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|126638730|gb|ABO24373.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
loihica PV-4]
Length = 426
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 201/401 (50%), Positives = 260/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP E+ LD++VIGQE+AKK AVYNHYKR+ +++
Sbjct: 65 LPTPHELRAHLDDYVIGQEKAKKV---------------LSVAVYNHYKRLKNAT----- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF
Sbjct: 105 --------------PKDG---------VELGKSNILLIGPTGSGKTLLAETLARFLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLEKVI 259
Query: 311 SERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA V+ G D S +L V+ DLV YGLIPEFIGR P+L
Sbjct: 260 EQRSHVGTGIGFGAEVK------GEADKATISDVLLQVEPEDLVKYGLIPEFIGRLPVLA 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E L+Q+L EPKNAL +Q+ +F M V+L F +DAL+ IA KAM + TGARGL
Sbjct: 314 TLAELDEAALIQILSEPKNALTKQFAALFEMEGVELEFREDALKAIALKAMDRKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E IL + M+++P T+ +V V++D+ V AP
Sbjct: 374 RSIVEGILLDIMYDLPSTE----NVAKVVIDESVVKGESAP 410
>gi|150388890|ref|YP_001318939.1| ATP-dependent protease ATP-binding subunit ClpX [Alkaliphilus
metalliredigens QYMF]
gi|229889848|sp|A6TM62.1|CLPX_ALKMQ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|149948752|gb|ABR47280.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Alkaliphilus
metalliredigens QYMF]
Length = 420
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 192/404 (47%), Positives = 268/404 (66%), Gaps = 61/404 (15%)
Query: 70 IDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQK 129
+DLP PKEI L+ +VIGQE+AKK+ AVYNHYKRI
Sbjct: 58 VDLPKPKEIKDILNGYVIGQEKAKKA---------------LAVAVYNHYKRI------- 95
Query: 130 ELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNV 189
N + + D+ VEL+KSN++++GPTGSGKTLLA+TLA+I+NV
Sbjct: 96 --------------------NTDTKTDD-VELQKSNIMMLGPTGSGKTLLAQTLAKILNV 134
Query: 190 PFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNN 248
PF I DAT+LT+AGYVGED E++L KL+ AAD+D+E A++GI+YIDE+DK+ K+E+ +
Sbjct: 135 PFAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAEKGIIYIDEIDKVARKSENPSI 194
Query: 249 GRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEK 308
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFICGGAF G+EK
Sbjct: 195 TRDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFDGIEK 252
Query: 309 TISERRQDSSIGFGAPVRANM--RTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFP 366
I +R +S+GFGA V++ + GG LL+ + DL+ +GLIPEF+GR P
Sbjct: 253 LIQKRTGKTSMGFGADVKSKVVKDIGG---------LLKQIQPEDLLKFGLIPEFVGRLP 303
Query: 367 ILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGA 426
++V+L L+E L+++L EPKNAL +QYKK+F ++ V + F +AL+LIA+KA+ + TGA
Sbjct: 304 VIVTLDQLDEAALIEILTEPKNALVKQYKKLFEIDGVNVEFEGEALKLIAEKAIERKTGA 363
Query: 427 RGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RGLR ++E ++ + M+++P + V+V K+ V + P
Sbjct: 364 RGLRGIVEGLMMDIMYDVP----SRDDIEKVIVTKDTVVNASLP 403
>gi|414075397|ref|YP_006994715.1| ATP-dependent ClpX protease [Anabaena sp. 90]
gi|413968813|gb|AFW92902.1| ATP-dependent ClpX protease [Anabaena sp. 90]
Length = 447
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 196/418 (46%), Positives = 265/418 (63%), Gaps = 46/418 (11%)
Query: 53 SESETENGNRNRNSEGNID-LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGA 111
+SE R R+S + + +P P+EI LDE VIGQ+ AKK
Sbjct: 60 QKSEPAEKRRTRSSNLSFNQIPKPREIKNYLDEHVIGQDEAKKV---------------L 104
Query: 112 CCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGP 171
AVYNHYKR+ +IL + G+ VE D+ +EL+KSN+LL+GP
Sbjct: 105 SVAVYNHYKRL-----------------AILQA---KGSAKVEADDAIELQKSNILLIGP 144
Query: 172 TGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGI 231
TG GKTLLA+TLA+I++VPF + DAT LT+AGYVGED E++L +LL AD DVE AQRGI
Sbjct: 145 TGCGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGI 204
Query: 232 VYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPI 290
+YIDE+DKI K+E+ + RDVSGEGVQQALLKMLEGTV NVP P G RKHP D I I
Sbjct: 205 IYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVP-PQGG-RKHPYQDCIQI 262
Query: 291 DTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSG 350
DT +ILF+CGGAFVGLEK + +R SIGF P + D L +
Sbjct: 263 DTSNILFVCGGAFVGLEKVVDQRVGKKSIGFVQPGDVQTKEKRAADT------LRHLQPD 316
Query: 351 DLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDD 410
DLV +G+IPEFIGR P++ + L+ED L+ +L EP++AL +QY+K+ +M+NV+L F D
Sbjct: 317 DLVKFGMIPEFIGRIPMVAVVDPLDEDALMAILTEPRSALVKQYQKLLNMDNVQLDFKPD 376
Query: 411 ALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETK-IGTSSVNAVLVDKEAVGSV 467
ALR IA++A + TGAR LR ++E ++ + M+E+P K + ++ +V+K + +
Sbjct: 377 ALRAIAQEAYRRKTGARALRGIVEELMLDVMYELPSRKDVTRCTITKEMVEKRSTAEL 434
>gi|429763603|ref|ZP_19295950.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Anaerostipes
hadrus DSM 3319]
gi|429178112|gb|EKY19396.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Anaerostipes
hadrus DSM 3319]
Length = 425
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 205/421 (48%), Positives = 267/421 (63%), Gaps = 58/421 (13%)
Query: 51 IESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIG 110
I SE E + ++G I+L PKEI + LD++VIGQ+ AKK
Sbjct: 44 ICSEIIEEEFEQYAENDGEINLRKPKEIKEFLDQYVIGQDEAKKV--------------- 88
Query: 111 ACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMG 170
AVYNHYKRI ++G D VEL+KSN+L++G
Sbjct: 89 LSVAVYNHYKRI------------------LMGG-----------DSDVELQKSNILMLG 119
Query: 171 PTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRG 230
PTGSGKTLLA+TLA+++NVPF I DATALT+AGYVGED E++L K++ AAD+D++ AQ G
Sbjct: 120 PTGSGKTLLAQTLAKMLNVPFAIADATALTEAGYVGEDVENILLKIIQAADYDIDRAQCG 179
Query: 231 IVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIP 289
I+YIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +V P G RKHP + I
Sbjct: 180 IIYIDEIDKITRKSENTSITRDVSGEGVQQALLKIIEGTVASV--PPQGGRKHPHQEFIQ 237
Query: 290 IDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDS 349
IDT +ILFICGGAF GLEK I R SIGFGA V T LL V
Sbjct: 238 IDTSNILFICGGAFDGLEKIIESRIGKKSIGFGADVFGQKETD-------LGELLRQVLP 290
Query: 350 GDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTD 409
D V +GLIPEFIGR P+ VSL+ L+E+ LV++L EPK+AL +QY+++F M+ VKL F D
Sbjct: 291 EDFVKFGLIPEFIGRVPVNVSLNPLDEEALVRILKEPKSALVKQYQRLFEMDGVKLTFDD 350
Query: 410 DALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDA 469
DAL IAKKA+ + TGARGLRA++E ++ + M+EIP + V+ L+ K+ V +
Sbjct: 351 DALIAIAKKALERKTGARGLRAIMEGVIMDLMYEIP----SQTDVSECLITKDVVEGKEK 406
Query: 470 P 470
P
Sbjct: 407 P 407
>gi|392408624|ref|YP_006445231.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Desulfomonile tiedjei DSM 6799]
gi|390621760|gb|AFM22967.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Desulfomonile tiedjei DSM 6799]
Length = 417
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 202/415 (48%), Positives = 268/415 (64%), Gaps = 62/415 (14%)
Query: 51 IESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIG 110
I E E E R R+ +PTP EI + LDE+VIGQE AKK IL
Sbjct: 46 IAEEYEKEELGRARSK-----VPTPSEIKRALDEYVIGQELAKK-----IL--------- 86
Query: 111 ACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMG 170
AV+NHYKRI + + VEL+KSN+LL+G
Sbjct: 87 -SVAVHNHYKRIESKP----------------------------DLDGVELQKSNILLVG 117
Query: 171 PTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRG 230
PTGSGKTLLA+TLARI+NVPF I DAT LT+AGYVGED E+++ LL AD+D+ A RG
Sbjct: 118 PTGSGKTLLAQTLARILNVPFAIADATTLTEAGYVGEDVENIILTLLQNADYDISRACRG 177
Query: 231 IVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIP 289
IVYIDE+DKI K E+ + RDVSGEGVQQALLK++EGT+ NVP G RKHP+ + +
Sbjct: 178 IVYIDEIDKISRKTENPSITRDVSGEGVQQALLKIVEGTMANVP--PKGGRKHPQQEFLQ 235
Query: 290 IDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDS 349
+DT +ILFICGGAFVGL+K I R S+GF A + G TD V+S++LE
Sbjct: 236 VDTTNILFICGGAFVGLDKVIHHRINMKSMGFNAQI-----GGPTTD--VSSNILEMAQP 288
Query: 350 GDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTD 409
DL+ YGLIPEF+GR P++ +L L+E+ L+++L+EPKNAL +QYKK+F +VKL FTD
Sbjct: 289 EDLIHYGLIPEFVGRLPVVATLHELDEEALIRILLEPKNALVKQYKKLFGFEHVKLRFTD 348
Query: 410 DALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+ALR +A +A+ + TGARGLR++LE + + M+E+PE K ++ V+V++E +
Sbjct: 349 EALRAVASEALQRKTGARGLRSILEESMLDIMYELPEYK----NLQEVIVNEEVI 399
>gi|84686589|ref|ZP_01014482.1| ATP-dependent protease ATP-binding subunit [Maritimibacter
alkaliphilus HTCC2654]
gi|84665502|gb|EAQ11979.1| ATP-dependent protease ATP-binding subunit [Rhodobacterales
bacterium HTCC2654]
Length = 423
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 196/416 (47%), Positives = 277/416 (66%), Gaps = 59/416 (14%)
Query: 56 ETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAV 115
E G+ ++++G +PTP+EIC LD++VIGQ AK+ AV
Sbjct: 51 EETKGSGLKSTDG---VPTPQEICGVLDDYVIGQSHAKRV---------------LSVAV 92
Query: 116 YNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSG 175
+NHYKR+ H++ K G DEI EL KSN+LL+GPTG G
Sbjct: 93 HNHYKRLNHAA--------------------KHG------DEI-ELAKSNILLIGPTGCG 125
Query: 176 KTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYID 235
KTLLA+TLARI++VPFT+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYID
Sbjct: 126 KTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYID 185
Query: 236 EVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKD 294
EVDKI K+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +
Sbjct: 186 EVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTN 243
Query: 295 ILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVA 354
ILFICGGAF GL++ I++R + S+IGFGA V+ A + + ++ DL+
Sbjct: 244 ILFICGGAFAGLDRIIAQRGKGSAIGFGADVKDEQ-------ARKIGEVFQELEPEDLLK 296
Query: 355 YGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRL 414
+GLIPEF+GR P++ +L L+ED LV +L +PKNAL +QY+++F + + KL FTDDAL
Sbjct: 297 FGLIPEFVGRLPVIATLEDLDEDALVTILTQPKNALVKQYQRLFEIEDAKLTFTDDALLA 356
Query: 415 IAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
I+KKA+ + TGARGLR+++E+IL + MF++P V+ V+V++EA + P
Sbjct: 357 ISKKAIQRKTGARGLRSIMEDILLDTMFDLP----ALEGVDEVVVNEEAANTDAKP 408
>gi|255658240|ref|ZP_05403649.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Mitsuokella
multacida DSM 20544]
gi|260849550|gb|EEX69557.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Mitsuokella
multacida DSM 20544]
Length = 436
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 262/401 (65%), Gaps = 55/401 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PK+I LD++VIGQ+ AKK+ AVYNHYKRI
Sbjct: 60 DVPKPKDIRAILDQYVIGQDEAKKT---------------LSVAVYNHYKRIN------- 97
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+G G K G E VEL KSN+L++GPTGSGKTLLA++LARI+NVP
Sbjct: 98 -----------MGQG-KPG-------EDVELSKSNILMIGPTGSGKTLLAQSLARILNVP 138
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DATALT+AGYVGED E++L KL+ AAD+DVE A+RGI+YIDE+DKI K+E+ +
Sbjct: 139 FAIADATALTEAGYVGEDVENILLKLIQAADYDVEKAERGIIYIDEIDKIARKSENPSIT 198
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT +VP P G RKHP + I IDT +ILFICGGAF G+EK
Sbjct: 199 RDVSGEGVQQALLKILEGTTASVP-PQGG-RKHPHQELIQIDTTNILFICGGAFDGIEKI 256
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R +GFGAP+++ R + D L V DL+ GLIPEFIGR P++V
Sbjct: 257 IESRLGQKQMGFGAPIKSK-RQRNIGDT------LRKVLPEDLLKSGLIPEFIGRLPVVV 309
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+E+ LV +L +PKNAL +QY+K+ ++ VKL F DDALR IAK+A+ + TGARGL
Sbjct: 310 TLDALDEEALVNILTKPKNALVKQYQKLLELDGVKLTFDDDALRQIAKEALKRKTGARGL 369
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E I+ M+++P + V A V K+ + S P
Sbjct: 370 RSIIEGIMRNVMYDVPSIE----GVTACRVTKDVITSKKEP 406
>gi|227486248|ref|ZP_03916564.1| ATP dependent protease ATP-binding subunit [Anaerococcus
lactolyticus ATCC 51172]
gi|227235659|gb|EEI85674.1| ATP dependent protease ATP-binding subunit [Anaerococcus
lactolyticus ATCC 51172]
Length = 404
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 194/394 (49%), Positives = 259/394 (65%), Gaps = 61/394 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
L PK+I LD +VIGQE AKK+ AVYNHYKRI +
Sbjct: 60 LSKPKDIKAYLDSYVIGQEDAKKT---------------LSVAVYNHYKRITSN------ 98
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
E+D VEL+KSN+L++GPTGSGKTLLA+TLAR +NVPF
Sbjct: 99 ----------------------EDDSEVELQKSNILMLGPTGSGKTLLAQTLARKLNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT+LT+AGYVGED E+++ KL+ AAD+D+EAA+ GI+Y+DE+DKI K+E+ + R
Sbjct: 137 AIADATSLTEAGYVGEDVENIILKLVQAADYDIEAAELGIIYVDEIDKITRKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT NVP P G RKHP + I +DT +ILFI GGAF G+ I
Sbjct: 197 DVSGEGVQQALLKLIEGTEANVP-PQGG-RKHPSQEYIRVDTTNILFILGGAFEGIGNII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
++R+ D +IGFGA + +T L V++ DL+ +GLIPEFIGR PI+VS
Sbjct: 255 NQRQMDKTIGFGADITKREKTD-----------LSMVNTDDLLKFGLIPEFIGRVPIIVS 303
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L AL+E+ LV++L EPKN+L +QY+K+F +++VKL F DDA+ IAKKA + TGARGLR
Sbjct: 304 LDALDEEALVRILKEPKNSLIKQYQKLFDLDDVKLSFNDDAISEIAKKAYDQKTGARGLR 363
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
++EN+L + M+EIP + V+V KE++
Sbjct: 364 TIIENLLLDVMYEIP----SRDEIKEVIVTKESI 393
>gi|401565789|ref|ZP_10806607.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Selenomonas
sp. FOBRC6]
gi|400184995|gb|EJO19230.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Selenomonas
sp. FOBRC6]
Length = 421
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 257/401 (64%), Gaps = 56/401 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI LD++VIGQ+ AKKS AVYNHYKRI
Sbjct: 60 DVPKPKEIRHILDQYVIGQDEAKKS---------------LSVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N +E VEL KSN+L++GPTGSGKTLLA+TLARI+NVP
Sbjct: 97 -------------------NVGQGKNEDVELRKSNILMLGPTGSGKTLLAQTLARILNVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E AQRGI+YIDE+DKI K+E+ +
Sbjct: 138 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAQRGIIYIDEIDKIARKSENPSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT +VP P G RKHP+ + + IDT +ILFICGGAF G+E+
Sbjct: 198 RDVSGEGVQQALLKILEGTTASVP-PQGG-RKHPQQELLQIDTTNILFICGGAFDGIEEI 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R +GFGA VR+ R L V DL+ GLIPEFIGR P++V
Sbjct: 256 IESRLGKKQMGFGAEVRSKKRVS-------VGESLSKVIPEDLMKNGLIPEFIGRLPVVV 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L++L+E LV++L EPKNAL +Q++K+ ++ V+L F D+AL LIAK+A+ TGARGL
Sbjct: 309 TLNSLDEAALVRILTEPKNALVKQFQKLLELDGVRLTFEDEALHLIAKEALTHKTGARGL 368
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E I+ M+E+P + V A V KE + + P
Sbjct: 369 RSIIEGIMRNVMYEVPSIQ----GVTACQVTKEVIANHSDP 405
>gi|428307442|ref|YP_007144267.1| ATP-dependent Clp protease ATP-binding subunit clpX [Crinalium
epipsammum PCC 9333]
gi|428248977|gb|AFZ14757.1| ATP-dependent Clp protease ATP-binding subunit clpX [Crinalium
epipsammum PCC 9333]
Length = 445
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 196/415 (47%), Positives = 261/415 (62%), Gaps = 50/415 (12%)
Query: 59 NGNRNRNSEGNIDL---PTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAV 115
+ + R N+ L P P+E+ K LDE VIGQ+ AKK AV
Sbjct: 62 DPKKRRAHSANLSLSQIPKPRELKKFLDEHVIGQQEAKKV---------------LSVAV 106
Query: 116 YNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEN-DEIVELEKSNVLLMGPTGS 174
YNHYKR+ S ++S N D+ V+L+KSN+LLMGPTG
Sbjct: 107 YNHYKRL---------------------SFIQSKNSGKPGADDAVDLQKSNILLMGPTGC 145
Query: 175 GKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYI 234
GKTLLA+TLA I++VPF + DAT LT+AGYVGED E++L +LL ADFDVE AQRGI+YI
Sbjct: 146 GKTLLAQTLASILDVPFAVADATTLTEAGYVGEDVENILLRLLQVADFDVEEAQRGIIYI 205
Query: 235 DEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTK 293
DE+DKI K+E+ + RDVSGEGVQQALLKMLEGTV NVP P G RKHP D I IDT
Sbjct: 206 DEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVP-PQGG-RKHPYQDCIQIDTS 263
Query: 294 DILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLV 353
+I+FICGGAFVGLEK + +R SIGF P R D +L ++ DLV
Sbjct: 264 NIMFICGGAFVGLEKVVEQRMGKKSIGFIQPGEGQPREKRAAD------ILRHMEPDDLV 317
Query: 354 AYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALR 413
+GLIPEFIGR P++ + L+E+ L+++L EP+NAL +QY+K+ M+NV+L F DAL+
Sbjct: 318 KFGLIPEFIGRIPVVAVVDPLDEEALMEILTEPRNALAKQYQKLLKMDNVQLDFKTDALK 377
Query: 414 LIAKKAMAKNTGARGLRALLENILTEAMFEIPETK-IGTSSVNAVLVDKEAVGSV 467
IA++A + TGAR LR ++E ++ E M+E+P K + ++ +V+K + +
Sbjct: 378 AIAQEAYRRKTGARALRGIVEELMLEVMYELPSRKDVTRCTITREMVEKRSTAEL 432
>gi|387824405|ref|YP_005823876.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
cf. novicida 3523]
gi|328676004|gb|AEB28679.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
cf. novicida 3523]
Length = 417
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 192/378 (50%), Positives = 244/378 (64%), Gaps = 51/378 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI K LD+++IGQ+ AKK AVYNHYKRI
Sbjct: 56 LPKPVEIKKYLDDYIIGQDNAKKV---------------LSVAVYNHYKRI--------- 91
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N D+ EL+KSNVLL+GPTGSGKTL A+TLA+++NVPF
Sbjct: 92 ------------------TSNPTKDDDTELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPF 133
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVG+D E+++ +LL ADFDV AQ+GI+YIDE+DKI K+ES + R
Sbjct: 134 AIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKSESTSITR 193
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP D I +DT +ILFICGGAF G+EK +
Sbjct: 194 DVSGEGVQQALLKLIEGTVSSVP-PKGG-RKHPNQDMIQVDTTNILFICGGAFAGIEKVV 251
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R SIGF A V ++L T L++ ++S DL +GLIPE IGR PI+
Sbjct: 252 KHRMDKVSIGFNADVIQQ------KNSLDTDKLMQKIESEDLTRFGLIPELIGRLPIVTV 305
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L E+ LV++L EPKNAL +QY K+F ++V + FTD A IAKKA+AK TGARGLR
Sbjct: 306 LNELKEEDLVRILTEPKNALIKQYIKLFKFDDVSIEFTDQAFVEIAKKAIAKKTGARGLR 365
Query: 431 ALLENILTEAMFEIPETK 448
+LEN+L E MF +P ++
Sbjct: 366 TILENVLLEVMFHVPSSE 383
>gi|254507763|ref|ZP_05119894.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus 16]
gi|219549288|gb|EED26282.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus 16]
Length = 427
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 257/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P+EI + LD++VIGQ+ AKK AVYNHYKR+
Sbjct: 65 LPAPREIREHLDDYVIGQDYAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 ---------------RNGDTTSEG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR+ T L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVATGTGIGFGAEVRSKDETK------TVGELFTQVEPEDLVKYGLIPEFIGRLPVTT 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+ED L+Q+L EPKNAL +QY +F + + +L F +DALR IAKKAM + TGARGL
Sbjct: 315 TLTELDEDALIQILCEPKNALTKQYAALFELEDSELEFREDALRAIAKKAMERKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P +V+ V++D+ + P
Sbjct: 375 RSILEAVLLETMYELP----SMDNVSKVVIDESVINGESEP 411
>gi|365925089|ref|ZP_09447852.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus mali
KCTC 3596 = DSM 20444]
gi|420266192|ref|ZP_14768681.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus mali
KCTC 3596 = DSM 20444]
gi|394426180|gb|EJE99067.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus mali
KCTC 3596 = DSM 20444]
Length = 415
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 196/411 (47%), Positives = 264/411 (64%), Gaps = 58/411 (14%)
Query: 62 RNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKR 121
R++ +E D+P P+EI L+++VIGQE+AKK+ AVYNHYKR
Sbjct: 51 RDQATEELTDVPKPREIVDILNQYVIGQEQAKKT---------------LAVAVYNHYKR 95
Query: 122 IYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEI-VELEKSNVLLMGPTGSGKTLLA 180
+ N ++E+DE EL+KSN+ L+GPTGSGKT LA
Sbjct: 96 V---------------------------NASLEDDESETELQKSNICLVGPTGSGKTFLA 128
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
++LA+I+ VPF I DAT LT+AGYVGED E++L KLL +ADFDVE A+RGI+YIDE+DKI
Sbjct: 129 QSLAKILQVPFAIADATTLTEAGYVGEDVENILLKLLQSADFDVERAERGIIYIDEIDKI 188
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K+E+ + RDVSGEGVQQALLK+LEGT+ NVP P G RKHP+ + I IDT +ILFI
Sbjct: 189 AKKSENVSITRDVSGEGVQQALLKILEGTIANVP-PQGG-RKHPQQEFIQIDTTNILFIV 246
Query: 300 GGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIP 359
GGAF G+E + R D +IGFG N +SL++ + DL+ +GLIP
Sbjct: 247 GGAFDGIETMVKNRLGDKTIGFGVDSTNNYND--------QASLMQQIIPEDLLKFGLIP 298
Query: 360 EFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKA 419
EFIGR PIL +L L E+ L+++L EPKNAL +QY ++ ++NVKL F DAL+ IA A
Sbjct: 299 EFIGRLPILSALEKLTEEDLIRILTEPKNALVKQYSRLLELDNVKLKFDKDALKEIAHLA 358
Query: 420 MAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+ +NTGARGLR+++EN + + MFEIP S V+ V+++K +V P
Sbjct: 359 IERNTGARGLRSIVENTMRDVMFEIP----SRSDVSQVIINKASVDGNKMP 405
>gi|392554153|ref|ZP_10301290.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudoalteromonas
undina NCIMB 2128]
Length = 427
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 261/401 (65%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQE AKK AVYNHYKR+ + S +++
Sbjct: 67 LPVPKEIRNHLDDYVIGQEHAKKV---------------LSVAVYNHYKRLRNQSTKQD- 110
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 111 ---------------------------VELGKSNILLIGPTGSGKTLLAETLARLLDVPF 143
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 144 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 203
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 204 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 261
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R +++ IGFG V+ + + L S + V+ DLV YGLIPEFIGR P++
Sbjct: 262 EQRSHKNTGIGFGVNVKESAASRSL------SETFKDVEPEDLVKYGLIPEFIGRLPVVA 315
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E LVQ+L EPKNA+ +Q+ +F M +V+L F DDALR IA KAM + TGARGL
Sbjct: 316 TLTELDEAALVQILSEPKNAITKQFSVLFGMEDVELEFRDDALRAIAHKAMERKTGARGL 375
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E +L + M+E+P +V+ V+VD+ + P
Sbjct: 376 RSIVEGVLLDTMYELP----SIDNVSKVVVDETVIKGESDP 412
>gi|326803638|ref|YP_004321456.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Aerococcus
urinae ACS-120-V-Col10a]
gi|326651295|gb|AEA01478.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Aerococcus
urinae ACS-120-V-Col10a]
Length = 418
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 205/423 (48%), Positives = 270/423 (63%), Gaps = 59/423 (13%)
Query: 62 RNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKR 121
++ N E ++ P P EI + LD++VIGQ AKK+ AVYNHYKR
Sbjct: 52 QSDNEEFIVNPPKPTEIRQILDDYVIGQTDAKKA---------------LSVAVYNHYKR 96
Query: 122 IYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAK 181
I + ++ + +++ VEL+KSN+LL+GPTGSGKT LA+
Sbjct: 97 INSNQIKNQ------------------------DEDNVELQKSNILLVGPTGSGKTYLAQ 132
Query: 182 TLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI- 240
TLARI+ VPF I DAT+LT+AGYVGED E++L KLL AADFDV+ AQ+GI+YIDE+DKI
Sbjct: 133 TLARILKVPFAIADATSLTEAGYVGEDVENILLKLLQAADFDVDKAQQGIIYIDEIDKIA 192
Query: 241 VKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICG 300
KAE+ + RDVSGEGVQQALLK+LEGTV NVP P G RKHP + I IDT +ILFI G
Sbjct: 193 TKAENVSITRDVSGEGVQQALLKILEGTVANVP-PQGG-RKHPHQEFIQIDTTNILFIVG 250
Query: 301 GAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPE 360
GAF G+E I ER IGF +A T L+T + E DL YGLIPE
Sbjct: 251 GAFDGIENIIKERTGHKVIGF----QATKTTKAEKHDLMTQVIPE-----DLQKYGLIPE 301
Query: 361 FIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAM 420
FIGR PI+ SL LNE+ L ++L EPKNAL +QYK++ +M+NV+L FTDD+LR IA+KA+
Sbjct: 302 FIGRLPIIASLDELNEEDLERILTEPKNALIKQYKQLLAMDNVQLEFTDDSLRAIAQKAI 361
Query: 421 AKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGD 480
+ TGARGLR+++E + E M++IP V+ V++ +E V +P ++ D
Sbjct: 362 DRKTGARGLRSIIEESMLEVMYDIP----SREDVSKVIITEEVVKDHASP----ELYDQD 413
Query: 481 GEL 483
G+L
Sbjct: 414 GQL 416
>gi|406897581|gb|EKD41496.1| hypothetical protein ACD_73C00692G0001 [uncultured bacterium]
Length = 416
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 191/392 (48%), Positives = 258/392 (65%), Gaps = 54/392 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P P+EI LDE+VIGQERAKK AV+NHYKRI SL K+
Sbjct: 62 VPKPQEIKTVLDEYVIGQERAKKV---------------LAVAVHNHYKRIESKSLSKD- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL+KSN+L++GPTGSGKTLLA+TLARI+NVPF
Sbjct: 106 ---------------------------VELQKSNILMVGPTGSGKTLLAQTLARILNVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ LL AADFD A+RGIVYIDE+DKI K+E+ + R
Sbjct: 139 TIVDATTLTEAGYVGEDVENIILNLLQAADFDKAKAERGIVYIDEIDKISRKSENPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV NV P G RKHP+ D I +DT +ILFICGGAF GL++ I
Sbjct: 199 DVSGEGVQQALLKIIEGTVANV--PPKGGRKHPQQDFIQVDTTNILFICGGAFCGLDQII 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R +GFGA ++ N +L+++++ DL+ +GLIPEF+GR P++ +
Sbjct: 257 EKRLNKKGMGFGAELKNNRDKN-------VGEVLQNLETEDLLRFGLIPEFVGRLPVVAT 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L+E L+ +L++P+NAL +QY+++F VKL TDDAL +AK+A+ K +GARGLR
Sbjct: 310 LTELDETALIDILVKPRNALIKQYQRLFDFEKVKLTLTDDALHAVAKQAIKKKSGARGLR 369
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDK 461
++LE+I+ + M++IP + I +N VDK
Sbjct: 370 SILESIMLDVMYDIPSQDNIEEVVINDDTVDK 401
>gi|414153434|ref|ZP_11409760.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411455113|emb|CCO07663.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 416
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 195/395 (49%), Positives = 256/395 (64%), Gaps = 57/395 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLP PKEI LD++VIGQE AK+ AVYNHYKRI
Sbjct: 57 DLPKPKEIKAILDQYVIGQENAKRQ---------------LAVAVYNHYKRIN------- 94
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
LG V E VEL KSN++++GPTG GKTLLA+TLAR++NVP
Sbjct: 95 -----------LGGKV----------EDVELSKSNIVMLGPTGCGKTLLAQTLARLLNVP 133
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A++GIVYIDE+DKI K+E+ +
Sbjct: 134 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSIT 193
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I +DT +ILFICGGAF G+EK
Sbjct: 194 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQLDTTNILFICGGAFDGIEKI 251
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R +GFGA ++ +L + DL+ +GLIPEF+GR P++V
Sbjct: 252 IQNRIGKKQMGFGAEIQTKKEQK-------IGEILAHILPEDLLKFGLIPEFVGRLPVIV 304
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+ED LVQ+L EPKNAL +QY+K+F ++ V L DALR +A++A+ +NTGARGL
Sbjct: 305 TLDALDEDALVQILTEPKNALAKQYEKLFELDGVALEIQPDALREVAREALKRNTGARGL 364
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
RA++E ++ M++IP K + V++ KEA+
Sbjct: 365 RAIMEEVMLNIMYDIPSRK----DIAKVIITKEAI 395
>gi|443473069|ref|ZP_21063094.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
pseudoalcaligenes KF707]
gi|442903632|gb|ELS28923.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
pseudoalcaligenes KF707]
Length = 426
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 196/400 (49%), Positives = 253/400 (63%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQERAKK AVYNHYKR+ + +
Sbjct: 65 LPAPKEIRTILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQRDKKDD- 108
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 109 ---------------------------VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFAGLEKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + +A L V+ DLV +GLIPEF+GR P++ +
Sbjct: 260 QNRSTRGGIGFNAEVRSKELGKKVGEA------LREVEPEDLVKFGLIPEFVGRLPVIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +A +A+ + TGARGLR
Sbjct: 314 LDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRPDALKAVAHRALERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE IL E M+EIP + V+ V++D+ + P
Sbjct: 374 SILEGILLETMYEIP----SQTEVSKVVIDESVIEGTSQP 409
>gi|123443341|ref|YP_001007315.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|420257506|ref|ZP_14760263.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. enterocolitica WA-314]
gi|6225174|sp|O33873.1|CLPX_YEREN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166215219|sp|A1JNN1.1|CLPX_YERE8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|2580495|gb|AAC45783.1| ClpX [Yersinia enterocolitica]
gi|122090302|emb|CAL13168.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|404515020|gb|EKA28798.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. enterocolitica WA-314]
Length = 423
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 198/412 (48%), Positives = 263/412 (63%), Gaps = 62/412 (15%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
+R R+S LPTP EI + LD++VIGQE AKK AVYNHYK
Sbjct: 58 HRERSS-----LPTPHEIRRHLDDYVIGQEPAKKV---------------LAVAVYNHYK 97
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
R+ N + +EL KSN+LL+GPTGSGKTLLA
Sbjct: 98 RLR----------------------------NGDTSNGIELGKSNILLIGPTGSGKTLLA 129
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+TLAR ++VPFT+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI
Sbjct: 130 ETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKI 189
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K+++ + RDVSGEGVQQALLK++EGT+ VP P G RKHP+ + + +DT ILFIC
Sbjct: 190 SRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQVDTSKILFIC 247
Query: 300 GGAFVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLI 358
GGAF GL+K I +R S IGFGA V+ G ++ LL + DL+ +GLI
Sbjct: 248 GGAFAGLDKVIGQRINTGSGIGFGATVK------GKSEKATEGELLRQAEPEDLIKFGLI 301
Query: 359 PEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKK 418
PEFIGR P++ +LS L+ED L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKK
Sbjct: 302 PEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFNLEGVELEFRDEALTAIAKK 361
Query: 419 AMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
AMA+ TGARGLR+++E L + M+++P + SV V+VD+ + AP
Sbjct: 362 AMARKTGARGLRSIVEGALLDTMYDLPSME----SVEKVVVDESVIAGQSAP 409
>gi|83592886|ref|YP_426638.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodospirillum
rubrum ATCC 11170]
gi|386349616|ref|YP_006047864.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodospirillum
rubrum F11]
gi|123739541|sp|Q2RU44.1|CLPX_RHORT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|83575800|gb|ABC22351.1| ClpX, ATPase regulatory subunit [Rhodospirillum rubrum ATCC 11170]
gi|346718052|gb|AEO48067.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodospirillum
rubrum F11]
Length = 422
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 190/375 (50%), Positives = 254/375 (67%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P+PK+I K LD++VIGQ+ AKK AV+NHYKR+ + +
Sbjct: 63 VPSPKDILKVLDDYVIGQQHAKKV---------------LSVAVHNHYKRLSQAGKNSD- 106
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 107 ---------------------------VELAKSNILLIGPTGCGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL++ I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDRII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + SSIGFGA VR +A T +L +V+ DL+ YGLIPEF+GR P+L +
Sbjct: 258 SARGKGSSIGFGADVRD-------PEARRTGEVLRAVEPEDLLKYGLIPEFVGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED LV +L PKNAL +QY+++F M + +L F +DALR IA KA+A+ TGARGLR
Sbjct: 311 LDDLDEDALVDILTTPKNALVKQYQRLFEMESTQLSFKEDALRCIALKAIARKTGARGLR 370
Query: 431 ALLENILTEAMFEIP 445
+++E IL + MF++P
Sbjct: 371 SIMEGILLDTMFDLP 385
>gi|344923031|ref|ZP_08776492.1| ATP-dependent protease ATP-binding subunit ClpX [Candidatus
Odyssella thessalonicensis L13]
Length = 356
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 193/390 (49%), Positives = 265/390 (67%), Gaps = 59/390 (15%)
Query: 77 EICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHL 136
EICK LDE+VIGQE+AKK AV+NHYKR+ ++ E
Sbjct: 2 EICKVLDEYVIGQEQAKKV---------------LSVAVHNHYKRLNNTGKNAE------ 40
Query: 137 YVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDA 196
+E+ KSN+LL+GPTGSGKTLLA+TLARI++VPFT+ DA
Sbjct: 41 ----------------------IEIAKSNILLVGPTGSGKTLLAQTLARIIDVPFTMADA 78
Query: 197 TALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGE 255
T LT+AGYVGED E+++ +LL AAD++V+ AQRGIVYIDEVDKI K+++ + RDVSGE
Sbjct: 79 TTLTEAGYVGEDVENIILRLLQAADYNVDRAQRGIVYIDEVDKISRKSDNPSITRDVSGE 138
Query: 256 GVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQ 315
GVQQALLK++EGT+ +VP P G RKHP+ + + +DT +ILFICGGAF G+E+ I+ R +
Sbjct: 139 GVQQALLKIMEGTIASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGIERIIASRGK 196
Query: 316 DSSIGFGAPVRA-NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSAL 374
+IGFGA VR + RT G +L+ ++ DL+ +GLIPEFIGR P++ +L+ L
Sbjct: 197 GVAIGFGADVRGPDDRTSG--------EILKDLEPEDLLKFGLIPEFIGRLPVIATLTDL 248
Query: 375 NEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLE 434
+ + LV++L +PKNAL +QY+++F M VKL FTDDAL +A+KA+A+ TGARGLR++LE
Sbjct: 249 SAEVLVEILTKPKNALVKQYQRLFDMEEVKLSFTDDALLAVAEKAIARKTGARGLRSILE 308
Query: 435 NILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
IL + MFE+P + V V+++KE V
Sbjct: 309 GILLDTMFELPSYE----DVAEVVINKEVV 334
>gi|332160750|ref|YP_004297327.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|386309497|ref|YP_006005553.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. palearctica Y11]
gi|418242376|ref|ZP_12868888.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|433550573|ref|ZP_20506617.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
enterocolitica IP 10393]
gi|318604629|emb|CBY26127.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325664980|gb|ADZ41624.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|330859949|emb|CBX70278.1| ATP-dependent Clp protease ATP-binding subunit clpX [Yersinia
enterocolitica W22703]
gi|351778210|gb|EHB20377.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|431789708|emb|CCO69657.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
enterocolitica IP 10393]
Length = 423
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 198/412 (48%), Positives = 263/412 (63%), Gaps = 62/412 (15%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
+R R+S LPTP EI + LD++VIGQE AKK AVYNHYK
Sbjct: 58 HRERSS-----LPTPHEIRRHLDDYVIGQEPAKKV---------------LAVAVYNHYK 97
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
R+ N + +EL KSN+LL+GPTGSGKTLLA
Sbjct: 98 RLR----------------------------NGDTSNGIELGKSNILLIGPTGSGKTLLA 129
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+TLAR ++VPFT+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI
Sbjct: 130 ETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKI 189
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K+++ + RDVSGEGVQQALLK++EGT+ VP P G RKHP+ + + +DT ILFIC
Sbjct: 190 SRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQVDTSKILFIC 247
Query: 300 GGAFVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLI 358
GGAF GL+K I +R S IGFGA V+ G ++ LL + DL+ +GLI
Sbjct: 248 GGAFAGLDKVIGQRINTGSGIGFGATVK------GKSEKATEGELLSQAEPEDLIKFGLI 301
Query: 359 PEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKK 418
PEFIGR P++ +LS L+ED L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKK
Sbjct: 302 PEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFNLEGVELEFRDEALTAIAKK 361
Query: 419 AMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
AMA+ TGARGLR+++E L + M+++P + SV V+VD+ + AP
Sbjct: 362 AMARKTGARGLRSIVEGALLDTMYDLPSME----SVEKVVVDESVIAGQSAP 409
>gi|340028582|ref|ZP_08664645.1| ATP-dependent protease ATP-binding subunit ClpX [Paracoccus sp.
TRP]
Length = 421
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 184/375 (49%), Positives = 258/375 (68%), Gaps = 54/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EIC LD++VIGQE AK+ AV+NHYKR+ HSS
Sbjct: 63 VPTPREICNVLDDYVIGQEHAKRV---------------LSVAVHNHYKRLNHSS----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ND +EL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ----------------------KND--IELAKSNILLIGPTGCGKTLLAQTLARILDVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 139 TMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL++ I
Sbjct: 199 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDRII 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
++R + +++GFGA V+ N G L + ++ DL+ +GLIPEF+GR P++ +
Sbjct: 257 AQRNKGTAMGFGASVKENDDKG-------VGELFKQLEPEDLLKFGLIPEFVGRLPVIAT 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+ +L +PKNAL +QY+++F + VKL FT+DAL IA++A+ + TGARGLR
Sbjct: 310 LGDLDEQALITILTQPKNALVKQYQRLFELEGVKLTFTEDALVAIARRAIKRKTGARGLR 369
Query: 431 ALLENILTEAMFEIP 445
+++E+IL + MF++P
Sbjct: 370 SIMEDILLDTMFDLP 384
>gi|114321436|ref|YP_743119.1| ATP-dependent protease ATP-binding subunit ClpX [Alkalilimnicola
ehrlichii MLHE-1]
gi|122311053|sp|Q0A6A8.1|CLPX_ALHEH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|114227830|gb|ABI57629.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Alkalilimnicola ehrlichii MLHE-1]
Length = 425
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 200/427 (46%), Positives = 268/427 (62%), Gaps = 64/427 (14%)
Query: 62 RNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKR 121
+ ++S LP P EI + LDEFV+GQE AKK AVYNHYKR
Sbjct: 55 QEQSSSAGAGLPRPHEINQVLDEFVVGQEHAKKV---------------LSVAVYNHYKR 99
Query: 122 IYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAK 181
+ S + E VEL KSN+LL+GPTGSGKTLLA+
Sbjct: 100 LEAGSRKDE----------------------------VELSKSNILLIGPTGSGKTLLAE 131
Query: 182 TLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV 241
TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ+GIVYIDE+DK+
Sbjct: 132 TLARMLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQQGIVYIDEIDKVS 191
Query: 242 -KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICG 300
KA++ + RDVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT ILFICG
Sbjct: 192 RKADNPSITRDVSGEGVQQALLKLIEGTTASVP-PQGG-RKHPQQEFLQVDTGGILFICG 249
Query: 301 GAFVGLEKTISERRQDSSIGFGAPVRAN--MRTGGLTDALVTSSLLESVDSGDLVAYGLI 358
GAF GL+K I +R + IGF A +++ R+ G T L+ V+ DLV YGLI
Sbjct: 250 GAFAGLDKVIQDRSEKGGIGFSAEIKSKDEKRSVGET--------LQDVEPEDLVKYGLI 301
Query: 359 PEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKK 418
PEF+GR P++ +L L+E LV++L PKNAL +QY+K+F M V+L F +DALR +A+K
Sbjct: 302 PEFVGRLPVVATLEELDEQALVEILSAPKNALVKQYQKLFEMEGVELEFREDALRAVARK 361
Query: 419 AMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILH 478
AM + TGARGLR +LE++L + M+++P + +V V+VD + P I++
Sbjct: 362 AMDRKTGARGLRTILEHVLLDTMYDLPSME----NVEKVVVDDAVIRGETRP----YIIY 413
Query: 479 GDGELER 485
G+ E R
Sbjct: 414 GNQEQSR 420
>gi|32035049|ref|ZP_00135115.1| COG1219: ATP-dependent protease Clp, ATPase subunit [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208745|ref|YP_001053970.1| ATP-dependent protease ATP-binding subunit ClpX [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|190150598|ref|YP_001969123.1| ATP-dependent Clp protease ATP-binding subunit [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303250640|ref|ZP_07336837.1| ATP-dependent protease ATP-binding subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|303252092|ref|ZP_07338261.1| ATP-dependent protease ATP-binding subunit [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307246196|ref|ZP_07528277.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307248302|ref|ZP_07530327.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307252912|ref|ZP_07534800.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307255176|ref|ZP_07536994.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307257344|ref|ZP_07539114.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307259614|ref|ZP_07541338.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307263942|ref|ZP_07545545.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|126097537|gb|ABN74365.1| ATP-dependent Clp protease ATP-binding subunit [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|189915729|gb|ACE61981.1| ATP-dependent Clp protease ATP-binding subunit [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302649074|gb|EFL79261.1| ATP-dependent protease ATP-binding subunit [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|302650628|gb|EFL80787.1| ATP-dependent protease ATP-binding subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306852805|gb|EFM85029.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306855172|gb|EFM87350.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306859550|gb|EFM91575.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306862049|gb|EFM94025.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306864194|gb|EFM96107.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306866259|gb|EFM98123.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306870704|gb|EFN02445.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 419
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 199/402 (49%), Positives = 258/402 (64%), Gaps = 50/402 (12%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
++PTP EI LDE+VIGQE AKK AVYNHYKR+ ++
Sbjct: 63 NVPTPHEINAHLDEYVIGQEHAKKV---------------LSVAVYNHYKRLRNAL---- 103
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
SG K N VEL KSN+LL+GPTGSGKTLLA+TLAR +NVP
Sbjct: 104 -------------SGHKETNG-------VELGKSNILLIGPTGSGKTLLAETLARRLNVP 143
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LTQAGYVGED E+V+ KLL DFD E A+RGIV+IDE+DKI K+ES +
Sbjct: 144 FAVADATTLTQAGYVGEDVENVIQKLLMKCDFDAEQAERGIVFIDEIDKITRKSESPSIT 203
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGTV N I G RKHP+G+ IP+DT ILFICGGAF GL+K
Sbjct: 204 RDVSGEGVQQALLKLIEGTVAN--INPQGSRKHPKGETIPVDTSKILFICGGAFAGLDKI 261
Query: 310 ISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
+ R + IGFGA ++ + LT+ L + V+ DLV +GLIPE IGR P++
Sbjct: 262 VEARSNKQGGIGFGAELKKDKEREDLTE------LFKQVEPEDLVKFGLIPELIGRLPVV 315
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
L L+E+ L+Q+L EPKNA+ +QY+ +F M V+L FT +AL IA+K++++ TGARG
Sbjct: 316 TPLQELDEEALIQILTEPKNAIIKQYQALFQMEGVELKFTKEALIAIAQKSISRKTGARG 375
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++EN+L + M+ +P K +V V V K V + D P
Sbjct: 376 LRSIVENLLLDTMYNLPTLK-AEKNVKKVTVGKGCVENGDKP 416
>gi|327398619|ref|YP_004339488.1| ATP-dependent Clp protease ATP-binding subunit clpX [Hippea
maritima DSM 10411]
gi|327181248|gb|AEA33429.1| ATP-dependent Clp protease ATP-binding subunit clpX [Hippea
maritima DSM 10411]
Length = 418
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 195/408 (47%), Positives = 263/408 (64%), Gaps = 56/408 (13%)
Query: 58 ENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYN 117
E+ N+ + + TP+EI K LDE+++ Q+ AKK A YN
Sbjct: 51 EDDELNKKKDDKLTSLTPEEIKKRLDEYIVSQDDAKKV---------------LAVAAYN 95
Query: 118 HYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKT 177
HYKRI +L+++ + VELEKSN+LL+GPTG+GKT
Sbjct: 96 HYKRINSQTLKRK--------------------------DDVELEKSNILLIGPTGTGKT 129
Query: 178 LLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEV 237
L+AKTLA+I+NVPF I DAT+LT+AGYVGED E++L +LL A D++V AQ+GIVYIDE+
Sbjct: 130 LIAKTLAKILNVPFAIADATSLTEAGYVGEDVENILVRLLQATDYNVALAQKGIVYIDEI 189
Query: 238 DKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDIL 296
DKI K+E+ + RDVSGEGVQQALLK++EG++VNV P G RKHP+ + I IDT +IL
Sbjct: 190 DKISRKSENPSITRDVSGEGVQQALLKLIEGSIVNV--PPYGGRKHPQQEFIQIDTTNIL 247
Query: 297 FICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYG 356
FICGGAF GLE I+ R +IGF PV + + +LL+ DL+ YG
Sbjct: 248 FICGGAFEGLENIIARRINKKAIGFTNPVNIDKKE--------KYNLLKQATPEDLMRYG 299
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
LIPE IGR ++ +L+ LNE++LV++L EPKNAL +QY KMFSM+NVKL TDDALR IA
Sbjct: 300 LIPELIGRLHVVATLNELNEEELVRILTEPKNALVKQYSKMFSMDNVKLTITDDALRAIA 359
Query: 417 KKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+KA+ + GARGLR+++E I+ + MF+IP K V ++D+ V
Sbjct: 360 RKAIERKVGARGLRSIMEEIMVDLMFKIPSMK----DVKECIIDENVV 403
>gi|338533214|ref|YP_004666548.1| ATP-dependent protease ATP-binding subunit ClpX [Myxococcus fulvus
HW-1]
gi|337259310|gb|AEI65470.1| ATP-dependent protease ATP-binding subunit ClpX [Myxococcus fulvus
HW-1]
Length = 427
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 200/426 (46%), Positives = 269/426 (63%), Gaps = 61/426 (14%)
Query: 58 ENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYN 117
E +R + + +P P EI LDE+VIGQERAKK+ AV+N
Sbjct: 51 EEIDREETKDTKLRIPRPSEIKAVLDEYVIGQERAKKT---------------LSVAVHN 95
Query: 118 HYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKT 177
HYKRI ++E+ VEL+KSN+LL+GPTGSGKT
Sbjct: 96 HYKRI-------------------------ESKVSMED---VELQKSNILLLGPTGSGKT 127
Query: 178 LLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEV 237
LLA+TLARI+NVPFTI DAT LT+AGYVGED E+++ LL AAD D+E AQRGIVYIDE+
Sbjct: 128 LLAQTLARILNVPFTIADATCLTEAGYVGEDVENIIVNLLQAADHDIERAQRGIVYIDEI 187
Query: 238 DKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDIL 296
DKI K+E+ + RDVSGEGVQQALLK++EGTV NV P G RKHP+ + + +DT +IL
Sbjct: 188 DKIARKSENPSITRDVSGEGVQQALLKLIEGTVANV--PPKGGRKHPQQEFLQVDTTNIL 245
Query: 297 FICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYG 356
FICGGAF GL++ I R S+GFGA V++ + LT+ LL+ V+ DL+ +G
Sbjct: 246 FICGGAFGGLDQVIERRLGGRSLGFGAEVQSK-KQRSLTE------LLKHVEPEDLLKFG 298
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
+IPEFIGR PI+ +L L+E L+ +L +PKNAL +QY+K+F ++ V L FTD AL+ IA
Sbjct: 299 MIPEFIGRLPIITALEELDEAALINILNQPKNALTKQYRKLFELDGVTLKFTDGALKAIA 358
Query: 417 KKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKI 476
+A+ + GARGLR++LE+ + + M+EIP K + VL+ +E + P +
Sbjct: 359 NEAIRRKAGARGLRSILESAMLDVMYEIPSRK----TAREVLISEEVILKKSEP----VV 410
Query: 477 LHGDGE 482
LH E
Sbjct: 411 LHAQPE 416
>gi|172041058|ref|YP_001800772.1| ATP-dependent protease ATP-binding subunit ClpX [Corynebacterium
urealyticum DSM 7109]
gi|171852362|emb|CAQ05338.1| ATP-dependent Clp protease, ATP-binding subunit [Corynebacterium
urealyticum DSM 7109]
Length = 424
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 196/377 (51%), Positives = 250/377 (66%), Gaps = 49/377 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQ+ AK++ AVYNHYKRI
Sbjct: 59 LPTPSEISAFLDKYVIGQDDAKRT---------------LAVAVYNHYKRIQ-------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVE-NDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
V+ N ND+ VEL KSN+L++GPTGSGKT LA++LAR+++VP
Sbjct: 96 --------------VEEANALARRNDDEVELSKSNILMLGPTGSGKTYLAQSLARMLDVP 141
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI-VKAESRNNG 249
F I DAT+LT+AGYVGED E++L KLL +ADFDVE AQRGI+YIDEVDKI K+E+ +
Sbjct: 142 FAIADATSLTEAGYVGEDVENILLKLLQSADFDVEKAQRGIIYIDEVDKIGRKSENPSIT 201
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV VP P G RKHP + I DTK++LFI GAF GLEK
Sbjct: 202 RDVSGEGVQQALLKILEGTVAAVP-PQGG-RKHPNQEFIQFDTKNVLFIVAGAFAGLEKV 259
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I +RR +GFGA V + + + D + V+ DLV +GLIPE IGR P++
Sbjct: 260 IEDRRGKKGLGFGAEVTS--KNDQVKDP------FQYVEPEDLVKFGLIPEVIGRLPVVT 311
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+ L+ED LVQVL EPKNAL RQY+++F M+NV+L F D ALR +A++A+A+ TGARGL
Sbjct: 312 HVGHLDEDALVQVLTEPKNALVRQYQRLFEMDNVQLAFEDGALREVARQALARETGARGL 371
Query: 430 RALLENILTEAMFEIPE 446
R+++E IL M+ IPE
Sbjct: 372 RSIMERILLPIMYSIPE 388
>gi|182417594|ref|ZP_02948916.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
butyricum 5521]
gi|237668486|ref|ZP_04528470.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
butyricum E4 str. BoNT E BL5262]
gi|182378549|gb|EDT76078.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
butyricum 5521]
gi|237656834|gb|EEP54390.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
butyricum E4 str. BoNT E BL5262]
Length = 429
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 262/401 (65%), Gaps = 59/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P P EI + LD +V+GQ+RAKKS AVYNHYKRI
Sbjct: 60 VPKPNEIKEYLDSYVVGQDRAKKS---------------LAVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEI-VELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N D+I VEL KSN+LL+GPTGSGKTLLA+TLA+ +NVP
Sbjct: 96 --------------------NTNKDDIDVELSKSNILLLGPTGSGKTLLAQTLAKFLNVP 135
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT LT+AGYVGED E++L KL+ AD+DVE A+RGI+YIDE+DKI K+E+ +
Sbjct: 136 FAIADATTLTEAGYVGEDVENILLKLIQNADYDVEKAERGIIYIDEIDKIARKSENPSIT 195
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I I+T +ILFICGGAF G++K
Sbjct: 196 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQINTSNILFICGGAFDGVDKI 253
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R + SS+GFGA +++ L + + DL+ +GLIPEF+GR PILV
Sbjct: 254 IEGRTRKSSMGFGADIQSKHEKD-------VGQLFKEIMPADLLKFGLIPEFVGRLPILV 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L +LN++ L+++L +PKNAL +QYKK+F +++VKL F D AL IA +A+++ TGARGL
Sbjct: 307 TLESLNKEALIEILTKPKNALVKQYKKLFELDDVKLDFEDGALTAIAAEAISRQTGARGL 366
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA++E+I+ E M+EIP + + V++ +E + + P
Sbjct: 367 RAIIEDIMNEIMYEIP----CDNRITKVIITEETIKNKKDP 403
>gi|95930402|ref|ZP_01313138.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Desulfuromonas acetoxidans DSM 684]
gi|95133442|gb|EAT15105.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Desulfuromonas acetoxidans DSM 684]
Length = 414
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 194/400 (48%), Positives = 257/400 (64%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++V+GQ AKK AVYNHYKRI +++
Sbjct: 61 LPAPAEIRATLDDYVVGQNWAKKV---------------LSVAVYNHYKRIRYAA----- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ND+ VE++KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 101 ----------------------KNDD-VEIQKSNILLLGPTGSGKTLLAQTLARVLNVPF 137
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ L+ AAD+D+E AQRGI+YIDE+DKI K+ES + R
Sbjct: 138 AMADATNLTEAGYVGEDVENIVLSLVQAADYDIEKAQRGIIYIDEIDKIARKSESPSITR 197
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT + IP G RKHP+ + I +DT +ILFICGGAF GLE I
Sbjct: 198 DVSGEGVQQALLKIIEGTTAS--IPPKGGRKHPQQEFIKVDTANILFICGGAFSGLEDVI 255
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S+R SIGFGA VR T LL+ ++ GDL+ YGLIPEFIGR P++ +
Sbjct: 256 SQRIGKKSIGFGANVRMPSET-------TLGKLLKDIEPGDLLKYGLIPEFIGRLPVIAT 308
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ LV +L EPKNAL RQY+K+ + +V L FTD AL +AK+A + TGARGLR
Sbjct: 309 LEELDEEALVLILKEPKNALVRQYQKLLDLEDVALKFTDGALVAVAKEAARRKTGARGLR 368
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE ++ + M++IP V V++ ++ V AP
Sbjct: 369 SILEEVMLDIMYDIP----SQDHVKEVVISEDVVVKKSAP 404
>gi|349575767|ref|ZP_08887673.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
shayeganii 871]
gi|348012631|gb|EGY51572.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
shayeganii 871]
Length = 435
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 199/414 (48%), Positives = 259/414 (62%), Gaps = 59/414 (14%)
Query: 69 NIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQ 128
N LPTP EI LD+ VIGQE+AKK+ AVYNHYKR+ H
Sbjct: 75 NDRLPTPAEIVANLDQHVIGQEQAKKA---------------LAVAVYNHYKRLRHP--- 116
Query: 129 KELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVN 188
K G+ VEL KSN+LL+GPTGSGKTLLA++LAR +N
Sbjct: 117 ------------------KEGDN-------VELSKSNILLIGPTGSGKTLLAQSLARKLN 151
Query: 189 VPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRN 247
VPF + DAT LT+AGYVGED E ++ KLL DFDVE AQ+GIVYIDE+DKI K+++ +
Sbjct: 152 VPFVMADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQKGIVYIDEIDKISRKSDNPS 211
Query: 248 NGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLE 307
RDVSGEGVQQALLK++EGTV +VP P G RKHP + I +DT +ILFICGGAF GLE
Sbjct: 212 ITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPNQEFINVDTTNILFICGGAFAGLE 269
Query: 308 KTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPI 367
K I +R + IGFGA V + +T+ L E V+ DL+ +GLIPE IGR P+
Sbjct: 270 KVIRQRTEKGGIGFGAAVHSKDEDADITE------LFEVVEPEDLIKFGLIPELIGRLPV 323
Query: 368 LVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGAR 427
+ +L+ L+ED L+ +L EPKNAL +QY+ +F+M V+L ALR IAK AM++ TGAR
Sbjct: 324 IATLAELDEDALINILTEPKNALVKQYQALFAMEGVELKVQPSALRSIAKLAMSRKTGAR 383
Query: 428 GLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDG 481
GLR+++E L E M+ +P+ K + V++D+ + P K+L DG
Sbjct: 384 GLRSIVERALLETMYRLPDVK---DEITTVVIDEAVIDRQQQP----KLLREDG 430
>gi|420644463|ref|ZP_15132467.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-29]
gi|391519174|gb|EIR71827.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-29]
Length = 423
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 201/422 (47%), Positives = 267/422 (63%), Gaps = 62/422 (14%)
Query: 51 IESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIG 110
I E + + +R+R+S LPTP EI LD++VIGQE AKK
Sbjct: 48 IREEIKEVSPHRDRSS-----LPTPHEIRHHLDDYVIGQEPAKKV--------------- 87
Query: 111 ACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMG 170
AVYNHYKR+ N + +EL KSN+LL+G
Sbjct: 88 LAVAVYNHYKRLR----------------------------NGDTSNGIELGKSNILLIG 119
Query: 171 PTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRG 230
PTGSGKTLLA+TLAR+++VPFT+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRG
Sbjct: 120 PTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRG 179
Query: 231 IVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIP 289
IVYIDE+DKI K+++ + RDVSGEGVQQALLK++EGT+ VP P G RKHP+ + +
Sbjct: 180 IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQ 237
Query: 290 IDTKDILFICGGAFVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVD 348
+DT ILFICGGAF GL+K I +R S IGFGA V+ G ++ LL V+
Sbjct: 238 VDTSKILFICGGAFAGLDKVIGQRINTGSGIGFGAVVK------GQSEKATEGELLSQVE 291
Query: 349 SGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFT 408
DL+ +GLIPEFIGR P++ +LS L+ED L+Q+L EPKNAL +QY+ +FS+ V+L F
Sbjct: 292 PEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFSLEGVELEFR 351
Query: 409 DDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVD 468
D+AL IAKKAMA+ TGARGLR+++E L + M+++P SV +VD+ +
Sbjct: 352 DEALTAIAKKAMARKTGARGLRSIVEGALLDTMYDLP----SMDSVEKGVVDESVIAGQS 407
Query: 469 AP 470
AP
Sbjct: 408 AP 409
>gi|348028492|ref|YP_004871178.1| ATP-dependent protease ATP-binding subunit ClpX [Glaciecola
nitratireducens FR1064]
gi|347945835|gb|AEP29185.1| ATP-dependent protease ATP-binding subunit ClpX [Glaciecola
nitratireducens FR1064]
Length = 425
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 194/406 (47%), Positives = 262/406 (64%), Gaps = 57/406 (14%)
Query: 67 EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSS 126
+ N LPTP EI K LD++VIGQE AKK AVYNHYKR+ ++
Sbjct: 60 QKNDALPTPAEIHKHLDDYVIGQEHAKKV---------------LAVAVYNHYKRLRNND 104
Query: 127 LQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARI 186
+ + VEL KSN+LL+GPTGSGKTLLA+TLAR+
Sbjct: 105 VH----------------------------DGVELGKSNILLIGPTGSGKTLLAETLARL 136
Query: 187 VNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAES 245
++VPFT+ DAT LT+AGYVGED E+++ KLL D+D E AQRGIVYIDE+DKI K+++
Sbjct: 137 LDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDPEKAQRGIVYIDEIDKISRKSDN 196
Query: 246 RNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVG 305
+ RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT ILFICGGAF G
Sbjct: 197 PSITRDVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAG 254
Query: 306 LEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGR 364
L+K I +R +++ IGFGA V++++ + S L + V+ DLV YGLIPEFIGR
Sbjct: 255 LDKVIEQRAAKNAGIGFGAEVKSSLNKKAV------SQLFKEVEPEDLVKYGLIPEFIGR 308
Query: 365 FPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNT 424
P++ SL LNED L+Q+L EPKNA+ +QY +F++ + L F DDAL IA KAM + T
Sbjct: 309 LPVVASLEELNEDALIQILKEPKNAITKQYGALFALEDTVLEFRDDALHAIATKAMHRKT 368
Query: 425 GARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
GARGLR+++E +L + M+E+P V+ V++D+ + P
Sbjct: 369 GARGLRSIVEAVLLDTMYELP----SMPKVSKVVIDEAVIKGESKP 410
>gi|303229430|ref|ZP_07316220.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Veillonella
atypica ACS-134-V-Col7a]
gi|401680556|ref|ZP_10812471.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Veillonella
sp. ACP1]
gi|429760070|ref|ZP_19292560.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Veillonella
atypica KON]
gi|302515966|gb|EFL57918.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Veillonella
atypica ACS-134-V-Col7a]
gi|400218464|gb|EJO49344.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Veillonella
sp. ACP1]
gi|429178475|gb|EKY19753.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Veillonella
atypica KON]
Length = 417
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 200/414 (48%), Positives = 268/414 (64%), Gaps = 64/414 (15%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTPKEI LD++VIGQ+ AK + AVYNHYKR
Sbjct: 59 ELPTPKEIKAHLDQYVIGQDDAK---------------VSLAVAVYNHYKR--------- 94
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
L +D++ D VEL+KSNVL +GPTGSGKTLLA+TLA+++ VP
Sbjct: 95 LQTDNMVDD-------------------VELQKSNVLFIGPTGSGKTLLAQTLAKMLEVP 135
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E A+RGI+YIDE+DKI K+E+ +
Sbjct: 136 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIERAERGIIYIDEIDKIARKSENPSIT 195
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + + IDT +ILFICGGAF G++K
Sbjct: 196 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPNQEMLQIDTTNILFICGGAFDGMDKV 253
Query: 310 ISERRQDSSIGFGAPV-RANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I++R ++GFGA V RA R S++L+ V DL+ +GLIPEFIGR P++
Sbjct: 254 ITKRTAKKTLGFGADVQRAEERD--------VSAILKEVVPEDLLKFGLIPEFIGRLPVM 305
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
V+L L+ D LVQ+L +PKNAL +QY+K+ S++ V+L F DDAL IA +A+ + TGARG
Sbjct: 306 VTLDLLDRDALVQILTKPKNALTKQYEKILSLDGVELTFEDDALEEIADEALQRKTGARG 365
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGE 482
LRA++E ++ M+E+P V +V +EAV G G IL + +
Sbjct: 366 LRAIIEKVMKYVMYEVP----SMDDVAKCIVTREAV-----KGTGEPILKNEAD 410
>gi|451940541|ref|YP_007461179.1| ATP-dependent protease ATP-binding subunit ClpX [Bartonella
australis Aust/NH1]
gi|451899928|gb|AGF74391.1| ATP-dependent protease ATP-binding subunit ClpX [Bartonella
australis Aust/NH1]
Length = 424
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 192/386 (49%), Positives = 256/386 (66%), Gaps = 53/386 (13%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
N++ + +PTP+EI LD++VIGQ AK+ AV+NHYK
Sbjct: 54 NKSSGVKARDGVPTPQEIITVLDDYVIGQRHAKRV---------------LSVAVHNHYK 98
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
R+ H S KS + +EL KSN+LL+GPTG GKT LA
Sbjct: 99 RLAHQS--------------------KSSD--------IELAKSNILLVGPTGCGKTYLA 130
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+TLARI++VPFTI DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDEVDKI
Sbjct: 131 QTLARIIDVPFTIADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEVDKI 190
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
KA++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFIC
Sbjct: 191 SRKADNPSITRDVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFIC 248
Query: 300 GGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIP 359
GGAF GLE+ IS R + +SIGF A V+A D + ++ DL+ +GLIP
Sbjct: 249 GGAFAGLERIISGRGEKTSIGFSAVVKA-------PDERCVGEIFRDLEPEDLIKFGLIP 301
Query: 360 EFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKA 419
EFIGR PI+ +L L+ LVQ+L +P+NAL +QY+++F M +V+L F +DALR+IAKKA
Sbjct: 302 EFIGRLPIIATLEDLDICALVQILSQPRNALVKQYQRLFEMEDVELSFHEDALRVIAKKA 361
Query: 420 MAKNTGARGLRALLENILTEAMFEIP 445
+ + TGARGLR+++E IL E MFE+P
Sbjct: 362 IERKTGARGLRSIMEKILLETMFELP 387
>gi|365538381|ref|ZP_09363556.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio ordalii
ATCC 33509]
Length = 426
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 257/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP +I + LD++VIGQE AKK AVYNHYKR+ +
Sbjct: 65 LPTPHKIREHLDDYVIGQEHAKKV---------------LAVAVYNHYKRLRN------- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G G VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 103 -----------GDKTSDG---------VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLVEGTIASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R S IGFGA VR+ T + + L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVATGSGIGFGAEVRSKDETKTIGE------LFNQVEPEDLVKYGLIPEFIGRLPVTA 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY +F + +V L F +DALR IAKKAM + TGARGL
Sbjct: 315 TLTELDEEALIQILCEPKNALTKQYAALFELEDVDLEFREDALRAIAKKAMNRKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P + V+ V++D+ + P
Sbjct: 375 RSILEGVLLETMYELP----SVNDVSKVVIDESVINGESQP 411
>gi|336325184|ref|YP_004605150.1| ATP-dependent protease ATP-binding subunit [Corynebacterium
resistens DSM 45100]
gi|336101166|gb|AEI08986.1| ATP-dependent protease ATP-binding subunit [Corynebacterium
resistens DSM 45100]
Length = 424
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 197/384 (51%), Positives = 254/384 (66%), Gaps = 49/384 (12%)
Query: 65 NSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYH 124
+ EG+ LP P EI K LD +VIGQ+ AK++ AVYNHYKRI
Sbjct: 52 SGEGSDQLPKPSEIAKFLDTYVIGQDEAKRT---------------LAVAVYNHYKRIK- 95
Query: 125 SSLQKELVSDHLYVDSILGSGVKSGNCNVE-NDEIVELEKSNVLLMGPTGSGKTLLAKTL 183
V+ N +D+ VEL KSN+L++GPTGSGKT LA++L
Sbjct: 96 ---------------------VEEANAGARRSDDEVELSKSNILMLGPTGSGKTYLAQSL 134
Query: 184 ARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-K 242
AR ++VPF I DAT+LT+AGYVGED E++L KLL AADFDV AQRGI+Y+DEVDKI K
Sbjct: 135 ARKLDVPFAIADATSLTEAGYVGEDVENILLKLLQAADFDVAKAQRGIIYVDEVDKISRK 194
Query: 243 AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGA 302
+E+ + RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I DTK++LFI GA
Sbjct: 195 SENPSITRDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPNQEFIQFDTKNVLFIVAGA 252
Query: 303 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFI 362
F GLEK ISERR +GFGA + G D + + V+ DLV +GLIPE I
Sbjct: 253 FAGLEKVISERRGKKGLGFGAEI------SGKKDE--EPNPFQFVEPEDLVKFGLIPELI 304
Query: 363 GRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAK 422
GR P++ + L+ED LV+VL EPKN+L RQY+++F M+ V+L FTD+AL+ IA++A+A+
Sbjct: 305 GRLPVVTHVGHLDEDALVRVLTEPKNSLVRQYQRLFEMDGVRLSFTDEALQEIAQQALAR 364
Query: 423 NTGARGLRALLENILTEAMFEIPE 446
TGARGLR+++E+IL MF IPE
Sbjct: 365 ETGARGLRSIMESILLPIMFAIPE 388
>gi|297587290|ref|ZP_06945935.1| ATP-dependent Clp protease ATP-binding subunit [Finegoldia magna
ATCC 53516]
gi|297575271|gb|EFH93990.1| ATP-dependent Clp protease ATP-binding subunit [Finegoldia magna
ATCC 53516]
Length = 411
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 264/401 (65%), Gaps = 57/401 (14%)
Query: 65 NSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYH 124
N++ IDLP P EI LD++VI QE KK+ AVYNHYKRI
Sbjct: 52 NTQERIDLPKPIEIKDVLDDYVIKQEEGKKA---------------LAVAVYNHYKRI-- 94
Query: 125 SSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLA 184
N N+ N++ VEL+KSN+LL+GPTGSGKTLLA+TLA
Sbjct: 95 -------------------------NSNLMNND-VELQKSNILLVGPTGSGKTLLAETLA 128
Query: 185 RIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KA 243
+I++VPF I DAT+LT+AGYVGED E+V+ KL+ AAD+D+E A++GI+YIDE+DKI K+
Sbjct: 129 KILDVPFAIADATSLTEAGYVGEDVENVILKLIQAADYDIEKAEQGIIYIDEIDKITRKS 188
Query: 244 ESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAF 303
E+ + RDVSGEGVQQALLK++EGT+ NVP P G RKHP + I +DTK+ILFI GGAF
Sbjct: 189 ENPSITRDVSGEGVQQALLKIVEGTICNVP-PQGG-RKHPNQEYIQVDTKNILFIVGGAF 246
Query: 304 VGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIG 363
GLEK I +R + SIGFGA + N S L + + DL+ +GLIPEF+G
Sbjct: 247 DGLEKIIEKRTETKSIGFGADLGENEHKR-------ISELFKDIRPEDLIKFGLIPEFVG 299
Query: 364 RFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKN 423
R P+LV+L L+E L+++L+EPKNA+ +QY+++F M++V+L F +DAL+ IAK A +
Sbjct: 300 RIPVLVTLDELDEQALIKILLEPKNAVIKQYQELFKMDDVELEFDEDALKAIAKLAYDRK 359
Query: 424 TGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
TGARGLR ++E L MFE+P ++ V++ KE+V
Sbjct: 360 TGARGLRTIIEKSLMNIMFELP----SRQDISKVILTKESV 396
>gi|303231335|ref|ZP_07318069.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Veillonella
atypica ACS-049-V-Sch6]
gi|302513931|gb|EFL55939.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Veillonella
atypica ACS-049-V-Sch6]
Length = 417
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 200/414 (48%), Positives = 267/414 (64%), Gaps = 64/414 (15%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTPKEI LD++VIGQ+ AK + AVYNHYKR+
Sbjct: 59 ELPTPKEIKAHLDQYVIGQDDAK---------------VSLAVAVYNHYKRLQTD----- 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
NV +D VEL+KSNVL +GPTGSGKTLLA+TLA+++ VP
Sbjct: 99 ---------------------NVVDD--VELQKSNVLFIGPTGSGKTLLAQTLAKMLEVP 135
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E A+RGI+YIDE+DKI K+E+ +
Sbjct: 136 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIERAERGIIYIDEIDKIARKSENPSIT 195
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + + IDT +ILFICGGAF G++K
Sbjct: 196 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPNQEMLQIDTTNILFICGGAFDGMDKV 253
Query: 310 ISERRQDSSIGFGAPV-RANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I++R ++GFGA V RA R S++L+ V DL+ +GLIPEFIGR P++
Sbjct: 254 ITKRTAKKTLGFGADVQRAEERD--------VSAILKEVVPEDLLKFGLIPEFIGRLPVM 305
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
V+L L+ D LVQ+L +PKNAL +QY+K+ S++ V+L F DDAL IA +A+ + TGARG
Sbjct: 306 VTLDLLDRDALVQILTKPKNALTKQYEKILSLDGVELTFEDDALEEIADEALQRKTGARG 365
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGE 482
LRA++E ++ M+E+P V +V +EAV G G IL + +
Sbjct: 366 LRAIIEKVMKYVMYEVP----SMDDVAKCIVTREAV-----KGTGEPILKNEAD 410
>gi|374705739|ref|ZP_09712609.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
S9]
Length = 427
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 258/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQERAKK AVYNHYKR+ Q++
Sbjct: 65 LPAPKEISAILDQYVIGQERAKKV---------------LAVAVYNHYKRLN----QRDK 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
SD VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 106 KSDD-----------------------VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT+ ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRSILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R + IGF A VR+ + ++ L +V+ DLV +GLIPEF+GR P++ +
Sbjct: 261 QGRSEKGGIGFNAQVRSKDLGKKIGES------LRNVEPDDLVKFGLIPEFVGRLPVIAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F + V L F DAL+ +A+KA+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYAKLFELEGVDLEFRPDALKSVAQKALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE IL + M+EIP + V+ V++D+ + P
Sbjct: 375 SILEGILLDTMYEIP----SQTDVSKVVIDESVIDGTSQP 410
>gi|357040210|ref|ZP_09101999.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Desulfotomaculum gibsoniae DSM 7213]
gi|355356874|gb|EHG04655.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Desulfotomaculum gibsoniae DSM 7213]
Length = 416
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 197/403 (48%), Positives = 263/403 (65%), Gaps = 61/403 (15%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI LD++VIGQ+ AKKS AVYNHYKRI
Sbjct: 57 DIPKPKEIKDILDQYVIGQDSAKKS---------------LAVAVYNHYKRIN------- 94
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
LG + VEL+KSN++++GPTGSGKTLLA+TLAR++NVP
Sbjct: 95 -----------LGGKIDD----------VELQKSNIVMLGPTGSGKTLLAQTLARLLNVP 133
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A+RGIVYIDE+DKI K+E+ +
Sbjct: 134 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAERGIVYIDEIDKIARKSENPSIT 193
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I +DT +ILFICGGAF G+EK
Sbjct: 194 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQLDTTNILFICGGAFDGIEKI 251
Query: 310 ISERRQDSSIGFGAPVRAN--MRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPI 367
I R +GFGA ++ MR G +L + DL+ YGLIPEF+GR PI
Sbjct: 252 IQNRTGKKVMGFGAEIKPKQEMRIG---------EILSHILPEDLLRYGLIPEFVGRLPI 302
Query: 368 LVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGAR 427
+V+L AL+ED LV++L EP+NAL +QY+K+ ++ V L F DAL+ IA++A+ + TGAR
Sbjct: 303 IVTLDALDEDALVRILTEPRNALVKQYEKLLDLDGVGLEFQSDALKTIAQEALRRKTGAR 362
Query: 428 GLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
GLR++LE+I+ E M+++P + + +V K+ V + + P
Sbjct: 363 GLRSILEDIMLEIMYDVPSQQ----DIAKCVVTKDTVLNKEKP 401
>gi|52842085|ref|YP_095884.1| ATP-dependent protease ATP-binding subunit ClpX [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|378777720|ref|YP_005186158.1| ATP-dependent Clp protease, ATP binding subunit ClpX [Legionella
pneumophila subsp. pneumophila ATCC 43290]
gi|52629196|gb|AAU27937.1| ATP-dependent Clp protease, ATP binding subunit ClpX [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|364508535|gb|AEW52059.1| ATP-dependent Clp protease, ATP binding subunit ClpX [Legionella
pneumophila subsp. pneumophila ATCC 43290]
Length = 426
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 192/400 (48%), Positives = 257/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTPKEI LDE+VIGQ+ AKK AVYNHYKR+ H S
Sbjct: 65 LPTPKEISNFLDEYVIGQQHAKKV---------------LSVAVYNHYKRLQHKS----- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++ VEL KSN+LL+GPTGSGKTLLA+TLARI+NVPF
Sbjct: 105 ------------------------EDGVELGKSNILLIGPTGSGKTLLAQTLARILNVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL D+DV+ AQ+GIVYIDE+DKI K+++ + R
Sbjct: 141 AMADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAQQGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSNILFICGGAFAGLDKVI 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
ER SSIGF A +++ + S +L ++S DL+ YGLIPEF+GR P++ +
Sbjct: 259 RERSDKSSIGFSAQLKSKKSSND-----EVSKVLGQLESDDLIKYGLIPEFVGRLPVVTT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+ +L PKNAL +Q++ +F M +L F +AL IAKKA+ + GARGLR
Sbjct: 314 LQELDEAALIDILTRPKNALTKQFQSLFKMEGSELEFRGEALIAIAKKALERKMGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LENIL + M+++P + VN V++D+ V + P
Sbjct: 374 SILENILLDTMYDLPSLE----GVNKVVIDESVVNGLSKP 409
>gi|417363849|ref|ZP_12136956.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Hvittingfoss str. A4-620]
gi|353599187|gb|EHC55427.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Hvittingfoss str. A4-620]
Length = 436
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 263/401 (65%), Gaps = 44/401 (10%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK + + V V+ AVYNHYKR+
Sbjct: 64 LPTPHEIRTHLDDYVIGQEQAKKVLVLAVAVYNHKKVLAV--AVYNHYKRLR-------- 113
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 114 --------------------NGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 153
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 154 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 213
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 214 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 271
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ R + S IGFGA V+A +D LL V+ DL+ +GLIPEFIGR P++
Sbjct: 272 ANRVETGSGIGFGATVKAK------SDKASEGELLSQVEPEDLIKFGLIPEFIGRLPVVA 325
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY+ +F++ V L F D+AL IA+KAMA+ TGARGL
Sbjct: 326 TLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIARKAMARKTGARGL 385
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P + V V++D+ + P
Sbjct: 386 RSIVEAALLDTMYDLPSME----DVEKVVIDESVIAGQSKP 422
>gi|61211423|sp|Q5ZUE0.2|CLPX_LEGPH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
Length = 424
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 192/400 (48%), Positives = 257/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTPKEI LDE+VIGQ+ AKK AVYNHYKR+ H S
Sbjct: 63 LPTPKEISNFLDEYVIGQQHAKKV---------------LSVAVYNHYKRLQHKS----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++ VEL KSN+LL+GPTGSGKTLLA+TLARI+NVPF
Sbjct: 103 ------------------------EDGVELGKSNILLIGPTGSGKTLLAQTLARILNVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL D+DV+ AQ+GIVYIDE+DKI K+++ + R
Sbjct: 139 AMADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAQQGIVYIDEIDKISRKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 199 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSNILFICGGAFAGLDKVI 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
ER SSIGF A +++ + S +L ++S DL+ YGLIPEF+GR P++ +
Sbjct: 257 RERSDKSSIGFSAQLKSKKSSND-----EVSKVLGQLESDDLIKYGLIPEFVGRLPVVTT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+ +L PKNAL +Q++ +F M +L F +AL IAKKA+ + GARGLR
Sbjct: 312 LQELDEAALIDILTRPKNALTKQFQSLFKMEGSELEFRGEALIAIAKKALERKMGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LENIL + M+++P + VN V++D+ V + P
Sbjct: 372 SILENILLDTMYDLPSLE----GVNKVVIDESVVNGLSKP 407
>gi|398798175|ref|ZP_10557476.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pantoea sp.
GM01]
gi|398100892|gb|EJL91120.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pantoea sp.
GM01]
Length = 423
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 199/412 (48%), Positives = 264/412 (64%), Gaps = 62/412 (15%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
+R R+S LPTP EI LD++VIGQERAKK AVYNHYK
Sbjct: 58 HRERSS-----LPTPHEIRHHLDDYVIGQERAKKV---------------LAVAVYNHYK 97
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
R+ N + N +EL KSN+LL+GPTGSGKTLLA
Sbjct: 98 RLR--------------------------NGDTSNG--IELGKSNILLIGPTGSGKTLLA 129
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+TLAR+++VPFT+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI
Sbjct: 130 ETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKI 189
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K+++ + RDVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFIC
Sbjct: 190 SRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFIC 247
Query: 300 GGAFVGLEKTISERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLI 358
GGAF GL+K IS+R + S IGFGA V+ G + LL V+ DL+ +GLI
Sbjct: 248 GGAFAGLDKVISQRVETGSGIGFGATVK------GKSQKASEGELLSQVEPEDLIKFGLI 301
Query: 359 PEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKK 418
PEFIGR P++ +LS L+E+ L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKK
Sbjct: 302 PEFIGRLPVVATLSELSEEALIQILREPKNALTKQYQALFNLEGVELEFRDEALTAIAKK 361
Query: 419 AMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
AM++ TGARGLR+++E L E M+++P V V++D+ + P
Sbjct: 362 AMSRKTGARGLRSIVEGALLETMYDLP----SMDDVEKVVIDESVIDGQSEP 409
>gi|183220374|ref|YP_001838370.1| ATP-dependent protease ATP-binding subunit ClpX [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|189910488|ref|YP_001962043.1| ATP-dependent protease ATP-binding subunit ClpX [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|238687813|sp|B0SMF0.1|CLPX_LEPBP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238687840|sp|B0SEC2.1|CLPX_LEPBA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167775164|gb|ABZ93465.1| ATPase subunit of endopeptidase Clp [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167778796|gb|ABZ97094.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
Length = 426
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 204/413 (49%), Positives = 264/413 (63%), Gaps = 55/413 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P P EI K LD++VIGQE+AKK+ AVYNHYKRI+H+
Sbjct: 65 DIPKPTEIKKILDQYVIGQEQAKKA---------------LAVAVYNHYKRIFHNER--- 106
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
K+G+ VELEKSN++L+GPTGSGKTLLA+TLARI+ VP
Sbjct: 107 ----------------KAGD--------VELEKSNIMLIGPTGSGKTLLAQTLARILKVP 142
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DATALT+AGYVGED E+++ KL+ AD DV+ A+ GI+YIDE+DKI K++S +
Sbjct: 143 FAIVDATALTEAGYVGEDVENIILKLIQNADNDVKRAEMGIIYIDEIDKISRKSDSASIT 202
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGTV NVP P G RKHP + IP++TK+ILFICGGAFVGL
Sbjct: 203 RDVSGEGVQQALLKIIEGTVANVP-PQGG-RKHPHQEYIPVETKNILFICGGAFVGLTDI 260
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I +R SIGF + N R + + SL+ V DL+ +GLIPEFIGR PI+
Sbjct: 261 IKQRVGVKSIGFHSNEVVNDRGRKIEEG---ESLVHHVIPDDLMKFGLIPEFIGRLPIIA 317
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L + L + EPKN+L +QY+KMF + NVKL FT+ A+ IA+ A+ + +GARGL
Sbjct: 318 TLDELTIESLKSIFTEPKNSLLKQYQKMFDIENVKLKFTESAIEAIAQTAIKRESGARGL 377
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGE 482
RA++E I+ E MF+IP K V V+V + V +AP IL GD E
Sbjct: 378 RAIVEEIMMELMFQIPSRK----DVLEVVVTDDTVLKKEAP---ITILKGDIE 423
>gi|71276512|ref|ZP_00652787.1| ClpX, ATPase regulatory subunit [Xylella fastidiosa Dixon]
gi|170729733|ref|YP_001775166.1| ATP-dependent protease ATP-binding subunit ClpX [Xylella fastidiosa
M12]
gi|238687959|sp|B0U5N2.1|CLPX_XYLFM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|71162689|gb|EAO12416.1| ClpX, ATPase regulatory subunit [Xylella fastidiosa Dixon]
gi|167964526|gb|ACA11536.1| ATP-dependent Clp protease ATP binding subunit Clpx [Xylella
fastidiosa M12]
Length = 426
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 200/424 (47%), Positives = 271/424 (63%), Gaps = 62/424 (14%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E R+S LP PKEI + LD++VIGQ+RAK++
Sbjct: 48 NDIIREELEEKSQSARSS-----LPKPKEILEVLDQYVIGQQRAKRT------------- 89
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKRI S H +ND+I EL KSN+LL
Sbjct: 90 --LAVAVYNHYKRIE---------SRH------------------KNDDI-ELAKSNILL 119
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ
Sbjct: 120 VGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQ 179
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
GIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ +
Sbjct: 180 HGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEF 237
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQDS-SIGFGAPVRANMRTGGLTDALVTSSLLES 346
+ +DTK+ILFICGGAF GL+K I +R ++ IGFG V+++ + +L
Sbjct: 238 LQVDTKNILFICGGAFAGLDKVIQQRCTEAGGIGFGVKVKSSESKRDV------GKVLAG 291
Query: 347 VDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLH 406
V+ DL+ +GLIPEF+GR P++ +L L+E LV++L EPKNA+ +Q+KK+F M NV+L
Sbjct: 292 VEPEDLIKFGLIPEFVGRLPVVATLDELDESALVKILTEPKNAITKQFKKLFEMENVELE 351
Query: 407 FTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
F DAL +A+KA+ + TGARGLR ++E +L + M+E+P ++ V+VD+ + +
Sbjct: 352 FRQDALSAVARKALKRKTGARGLRTIVELVLLDTMYELP----SQEGISKVVVDESVIEN 407
Query: 467 VDAP 470
P
Sbjct: 408 KSEP 411
>gi|372268543|ref|ZP_09504591.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas sp.
S89]
Length = 427
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 259/400 (64%), Gaps = 53/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP+EI + LD++VIGQ RAKK AVYNHYKR+
Sbjct: 64 LPTPQEITEILDQYVIGQARAKKV---------------LAVAVYNHYKRLRT------- 101
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G GVK ++D VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 102 -----------GKGVKG-----KDD--VELGKSNILLVGPTGSGKTLLAETLARLLNVPF 143
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ+GIVYIDE+DKI K+++ + R
Sbjct: 144 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITR 203
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 204 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSNILFICGGAFAGLDKVI 261
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + IGF A V++ + L+ ++ DLV YGLIPEF+GR P+ +
Sbjct: 262 RDRSEKGGIGFSAEVKSKDSNSNFGEVLL------DLEPEDLVRYGLIPEFVGRLPVTAT 315
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L LN LVQ+L EP+NAL +QY K+F M V+L F DAL +A KAM + TGARGLR
Sbjct: 316 LEELNRAALVQILTEPRNALTKQYGKLFDMEGVELDFRPDALDAVATKAMERKTGARGLR 375
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+++E++L E M++IP +V V++D+ + AP
Sbjct: 376 SIMESVLLETMYDIP----SMDNVAKVVIDEAVIKGESAP 411
>gi|84515417|ref|ZP_01002779.1| ATP-dependent protease ATP-binding subunit [Loktanella
vestfoldensis SKA53]
gi|84510700|gb|EAQ07155.1| ATP-dependent protease ATP-binding subunit [Loktanella
vestfoldensis SKA53]
Length = 421
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 188/396 (47%), Positives = 263/396 (66%), Gaps = 58/396 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP +IC LD++VIGQ AK+ AV+NHYKR+ H+
Sbjct: 63 VPTPSDICAVLDDYVIGQVHAKRV---------------LSVAVHNHYKRLNHA------ 101
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ +EL KSN++L+GPTG GKTLLA+TLARI++VPF
Sbjct: 102 -----------------------DKSDIELAKSNIMLIGPTGCGKTLLAQTLARILDVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 139 TMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 199 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+ R + S +GFGA V+ D + + ++ DL+ +GLIPEF+GR P++ +
Sbjct: 257 ARRSKGSGMGFGADVKD-------VDERGIGEVFQDLEPEDLLKFGLIPEFVGRLPVIAT 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L+ED L+ +L +PKNAL +QY+++F + N KL FTDDAL IAK+A+ + TGARGLR
Sbjct: 310 LTDLDEDALITILTKPKNALVKQYQRLFELENTKLTFTDDALTAIAKRAIKRKTGARGLR 369
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
+++E IL + MF++P G +V V+V++EAV S
Sbjct: 370 SIMEGILLDTMFDLP----GMDTVTEVVVNEEAVTS 401
>gi|261494049|ref|ZP_05990552.1| S14 family endopeptidase ClpX [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496190|ref|ZP_05992596.1| S14 family endopeptidase ClpX [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261308142|gb|EEY09439.1| S14 family endopeptidase ClpX [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261310215|gb|EEY11415.1| S14 family endopeptidase ClpX [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 415
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 198/414 (47%), Positives = 262/414 (63%), Gaps = 56/414 (13%)
Query: 61 NRNRNSEGNI--DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNH 118
+ N++ EG+ ++PTP E+ LD++VIGQE AKK AVYNH
Sbjct: 51 DENQDDEGSFFTNVPTPHELHAHLDDYVIGQEHAKKV---------------LSVAVYNH 95
Query: 119 YKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTL 178
YKR+ +S N + VEL KSN+LL+GPTGSGKTL
Sbjct: 96 YKRL------------------------RSALSNHQTTNGVELGKSNILLIGPTGSGKTL 131
Query: 179 LAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVD 238
LA+TLAR +NVPF + DAT LTQAGYVGED E+V+ KLL DF+ E A+RGIV+IDE+D
Sbjct: 132 LAETLARRLNVPFAVADATTLTQAGYVGEDVENVIQKLLMKCDFEAEQAERGIVFIDEID 191
Query: 239 KIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILF 297
KI K+ES + RDVSGEGVQQALLK+LEGTV N I G RKHP+G+ IP+DT ILF
Sbjct: 192 KITRKSESASITRDVSGEGVQQALLKLLEGTVAN--INPQGGRKHPKGETIPVDTSKILF 249
Query: 298 ICGGAFVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYG 356
ICGGAF GL+K + R IGF A ++ + LT+ L + V+ DLV +G
Sbjct: 250 ICGGAFAGLDKIVEARTNTQGGIGFAAALKKDKDRQDLTE------LFKQVEPEDLVKFG 303
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
LIPE IGR P++ L L+E+ L+Q+L EPKNA+ +QY+ +F M V+LHFT DAL IA
Sbjct: 304 LIPELIGRLPVVTPLQELDEEALIQILTEPKNAIIKQYQALFEMEGVELHFTKDALISIA 363
Query: 417 KKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+KA+++ TGARGLR+++EN+L + M+++P T + V + K V + D P
Sbjct: 364 QKAISRKTGARGLRSIVENLLLDTMYDLP-----TLNAKKVTIGKGCVENGDKP 412
>gi|258625373|ref|ZP_05720270.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio mimicus
VM603]
gi|262166051|ref|ZP_06033788.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio mimicus
VM223]
gi|262171084|ref|ZP_06038762.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio mimicus
MB-451]
gi|449144448|ref|ZP_21775263.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio mimicus
CAIM 602]
gi|258582364|gb|EEW07216.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio mimicus
VM603]
gi|261892160|gb|EEY38146.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio mimicus
MB-451]
gi|262025767|gb|EEY44435.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio mimicus
VM223]
gi|449079949|gb|EMB50868.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio mimicus
CAIM 602]
Length = 426
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 259/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP++I + LD++VIGQE AKK AVYNHYKR
Sbjct: 65 LPTPRKIREHLDDYVIGQEHAKKV---------------LAVAVYNHYKR---------- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
L +G +G+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 100 ----------LRNGDTTGDG-------VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI K+E+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKSENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR+ + L S L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVATGTGIGFGADVRSKDNSKTL------SELFTQVEPEDLVKYGLIPEFIGRLPVTA 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E L+Q+L EPKNAL +QY +F + NV L F +DAL+ IA KAM + TGARGL
Sbjct: 315 TLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAIAAKAMKRKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P + V+ V++D+ + AP
Sbjct: 375 RSILEAVLLETMYELPSME----EVSKVVIDESVINGESAP 411
>gi|430744132|ref|YP_007203261.1| LOW QUALITY PROTEIN: endopeptidase Clp ATP-binding regulatory
subunit ClpX [Singulisphaera acidiphila DSM 18658]
gi|430015852|gb|AGA27566.1| LOW QUALITY PROTEIN: endopeptidase Clp ATP-binding regulatory
subunit ClpX [Singulisphaera acidiphila DSM 18658]
Length = 459
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 195/379 (51%), Positives = 247/379 (65%), Gaps = 56/379 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+PTP+EI + LD +VI Q+RAKK AV+NHYKR+ H
Sbjct: 90 DIPTPREIKEQLDAYVIDQDRAKKV---------------LSVAVHNHYKRLVHGE---- 130
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+ D +E++KSN+LLMGPTG GKTLLA+TLARI+NVP
Sbjct: 131 -----------------------DADSSIEIDKSNILLMGPTGCGKTLLARTLARILNVP 167
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNN-G 249
F I DAT LT+AGYVGED E++L KLL AADFD+E+AQRGI+YIDE+DKI K +
Sbjct: 168 FAIGDATTLTEAGYVGEDVENILLKLLHAADFDLESAQRGIIYIDEIDKIGKTNHNVSIT 227
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLKMLEGTV NVP P G RKHP I +DT +ILFICGG FVGLE
Sbjct: 228 RDVSGEGVQQALLKMLEGTVANVP-PQGG-RKHPEQQYIQLDTTNILFICGGTFVGLENL 285
Query: 310 ISERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPI 367
I+ R +IGFG+ A N+ G SLL+ V S D++ +G+IPEF+GR P+
Sbjct: 286 IARRVGRKTIGFGSQSEAEHNVELG---------SLLDKVTSDDILEFGMIPEFVGRLPV 336
Query: 368 LVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGAR 427
+ L L+ D LVQ++ EP+NAL +QY+K+F M L FT +AL IAKKA AK+TGAR
Sbjct: 337 VCPLMPLDVDALVQIMTEPRNALVKQYRKLFEMEGADLEFTPEALIEIAKKAKAKDTGAR 396
Query: 428 GLRALLENILTEAMFEIPE 446
GLR+++E I+ E M+E+P+
Sbjct: 397 GLRSIVEEIMLEIMYELPD 415
>gi|357009616|ref|ZP_09074615.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Paenibacillus
elgii B69]
Length = 421
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 207/413 (50%), Positives = 263/413 (63%), Gaps = 61/413 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI LD +VIGQE+AKKS AVYNHYKRI +S Q +
Sbjct: 60 DVPKPKEIRAILDSYVIGQEQAKKS---------------LSVAVYNHYKRI--NSQQSK 102
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
L E VEL+KSN++L+GPTGSGKTLLA+TLA+I+NVP
Sbjct: 103 L-------------------------EDVELQKSNIVLVGPTGSGKTLLAQTLAKILNVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A+RGI+YIDE+DK+ K+E+ +
Sbjct: 138 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAERGIIYIDEIDKVARKSENPSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFICGGAF GLE+
Sbjct: 198 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFDGLEQI 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R IGFG T G L L V DL+ +GLIPEF+GR P++
Sbjct: 256 IKRRIGKKVIGFG--------TDGHKADLKPGEYLSLVLPEDLLKFGLIPEFVGRLPVIS 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+E LV++L EPKNAL +QY+KM M+NV L F +AL IAK+A+ +NTGARGL
Sbjct: 308 TLEPLDEAALVRILTEPKNALVKQYQKMLEMDNVSLEFEPEALEEIAKEAIKRNTGARGL 367
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGE 482
RA++E I+ E M+E P + + +V KEAV + P +I DG+
Sbjct: 368 RAIIEGIMLEVMYEAP----SRTESSKCIVTKEAVQAKIIP----QITAADGQ 412
>gi|114799276|ref|YP_760783.1| ATP-dependent protease ATP-binding subunit ClpX [Hyphomonas
neptunium ATCC 15444]
gi|123128702|sp|Q0C0G0.1|CLPX_HYPNA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|114739450|gb|ABI77575.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Hyphomonas
neptunium ATCC 15444]
Length = 420
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 193/394 (48%), Positives = 264/394 (67%), Gaps = 54/394 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EIC LD++VIGQ AK+ I + AV+NHYKR+ H
Sbjct: 64 VPTPQEICDVLDDYVIGQRYAKR--ILSV-------------AVHNHYKRLSH------- 101
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+G G VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 102 ------------AGKTDG---------VELSKSNILLVGPTGCGKTLLAQTLARILDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIVLKLLQSADYNVERAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 201 DVSGEGVQQALLKIMEGTVAAVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+ R +++SIGFGA +++ G L V+ DL +GLIPEFIGR P+L +
Sbjct: 259 AARGENASIGFGATIKSGEERG-------VGDTLREVEPEDLQKFGLIPEFIGRLPVLAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L +PKNAL +QY+++F M +V+L FT +AL +A++A+ + TGARGLR
Sbjct: 312 LEDLDEKALIQILTQPKNALLKQYQRLFDMESVQLTFTPEALVAVARRAITRKTGARGLR 371
Query: 431 ALLENILTEAMFEIPETK-IGTSSVNAVLVDKEA 463
+++E+IL + MFE+P + + +NA +VD A
Sbjct: 372 SIMESILLDTMFELPNLRGVEEVVINAEVVDGNA 405
>gi|307261755|ref|ZP_07543421.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306868573|gb|EFN00384.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 419
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 198/402 (49%), Positives = 258/402 (64%), Gaps = 50/402 (12%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
++PTP EI LDE+VIGQE AKK AVYNHYKR+ ++
Sbjct: 63 NVPTPHEINAHLDEYVIGQEHAKKV---------------LSVAVYNHYKRLRNAL---- 103
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
SG K N VEL KSN+LL+GPTGSGKTLLA+TLAR +NVP
Sbjct: 104 -------------SGHKETNG-------VELGKSNILLIGPTGSGKTLLAETLARRLNVP 143
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LTQAGYVGED E+V+ KLL DFD E A+RGIV+IDE+DKI K+ES +
Sbjct: 144 FAVADATTLTQAGYVGEDVENVIQKLLMKCDFDAEQAERGIVFIDEIDKITRKSESPSIT 203
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGTV N I G RKHP+G+ IP+DT ILFICGGAF GL+K
Sbjct: 204 RDVSGEGVQQALLKLIEGTVAN--INPQGSRKHPKGETIPVDTSKILFICGGAFAGLDKI 261
Query: 310 ISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
+ R + IGFGA ++ + LT+ L + V+ DLV +GLIPE IGR P++
Sbjct: 262 VEARSNKQGGIGFGAELKKDKEREDLTE------LFKQVEPEDLVKFGLIPELIGRLPVV 315
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
L L+E+ L+Q+L EPKNA+ +QY+ +F M V+L FT +AL IA+K++++ TGARG
Sbjct: 316 TPLQELDEEALIQILTEPKNAIIKQYQALFQMEGVELKFTKEALIAIAQKSISRKTGARG 375
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++EN+L + M+ +P K +V V + K V + D P
Sbjct: 376 LRSIVENLLLDTMYNLPTLK-AEKNVKKVTIGKGCVENGDKP 416
>gi|407893449|ref|ZP_11152479.1| ATP-dependent protease ATP-binding subunit ClpX [Diplorickettsia
massiliensis 20B]
Length = 439
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 193/384 (50%), Positives = 248/384 (64%), Gaps = 44/384 (11%)
Query: 66 SEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHS 125
EG+ +P P EI DEFV+GQ AKK A YNHYKR+
Sbjct: 59 QEGHFVIPKPAEIHSVFDEFVVGQTYAKKV---------------LSVAAYNHYKRLD-- 101
Query: 126 SLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLAR 185
L K N +++ E+ KSNVLL+GPTGSGKTLLAKTLAR
Sbjct: 102 ----------------LLKKAKHHPLNAKDE--TEVSKSNVLLIGPTGSGKTLLAKTLAR 143
Query: 186 IVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AE 244
+ N+PF I DAT LT+AGYVG+D E++L KLL AA+ +VE AQ GI+YIDE+DKI + AE
Sbjct: 144 LFNLPFAIADATTLTEAGYVGDDVENILQKLLQAANGNVERAQLGIIYIDEIDKISRRAE 203
Query: 245 SRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFV 304
S + RDVSGEGVQQALLK+LEGTV +VP+ G RKHP + + IDT +ILFICGG F
Sbjct: 204 SPSITRDVSGEGVQQALLKLLEGTVASVPL--QGGRKHPNQETVQIDTTNILFICGGTFS 261
Query: 305 GLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGR 364
GLEK I R + + IGF A VR+ + ++L + S DLV YG+IPE IGR
Sbjct: 262 GLEKIIRHRTERTGIGFAADVRSK------EEKEAVQTMLRRLQSEDLVKYGIIPELIGR 315
Query: 365 FPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNT 424
P++ +L LN+D LV++L EPKNAL +QY K+F M+NV L F D+ALR++AKKA+ + T
Sbjct: 316 LPVIATLEELNDDMLVKILKEPKNALIKQYVKLFKMDNVDLEFRDEALRVVAKKALERKT 375
Query: 425 GARGLRALLENILTEAMFEIPETK 448
GARGLR++LEN L + M+E+P +
Sbjct: 376 GARGLRSILENALLDVMYELPSMQ 399
>gi|398792057|ref|ZP_10552755.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pantoea sp.
YR343]
gi|398214189|gb|EJN00772.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pantoea sp.
YR343]
Length = 423
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 199/412 (48%), Positives = 264/412 (64%), Gaps = 62/412 (15%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
+R R+S LPTP EI LD++VIGQERAKK AVYNHYK
Sbjct: 58 HRERSS-----LPTPHEIRHHLDDYVIGQERAKKV---------------LAVAVYNHYK 97
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
R+ N + N +EL KSN+LL+GPTGSGKTLLA
Sbjct: 98 RLR--------------------------NGDTSNG--IELGKSNILLIGPTGSGKTLLA 129
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+TLAR+++VPFT+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI
Sbjct: 130 ETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKI 189
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K+++ + RDVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFIC
Sbjct: 190 SRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFIC 247
Query: 300 GGAFVGLEKTISERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLI 358
GGAF GL+K IS+R + S IGFGA V+ G + LL V+ DL+ +GLI
Sbjct: 248 GGAFAGLDKVISQRVETGSGIGFGATVK------GKSQKASEGELLSQVEPEDLIKFGLI 301
Query: 359 PEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKK 418
PEFIGR P++ +LS L+E+ L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKK
Sbjct: 302 PEFIGRLPVVATLSELSEEALIQILREPKNALTKQYQALFNLEGVELEFRDEALTAIAKK 361
Query: 419 AMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
AM++ TGARGLR+++E L E M+++P V V++D+ + P
Sbjct: 362 AMSRKTGARGLRSIVEGALLETMYDLP----SMDDVEKVVIDESVIEGQSEP 409
>gi|326203840|ref|ZP_08193702.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
papyrosolvens DSM 2782]
gi|325985938|gb|EGD46772.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
papyrosolvens DSM 2782]
Length = 431
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 190/401 (47%), Positives = 264/401 (65%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
++P PKEI + LD++V+GQ+ AK+S AVYNHYKRI
Sbjct: 60 EIPKPKEIKEILDQYVVGQDTAKRS---------------LSVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
S VK+ + +EL+KSN++++GPTGSGKT LA+TLA+I+NVP
Sbjct: 97 ------------NSDVKTSD--------IELQKSNIVMLGPTGSGKTFLAQTLAKILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L +L+ AAD+D+E A++GI+YIDE+DKI K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLRLIQAADYDIEKAEKGIIYIDEIDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ +VP P G RKHP + I IDT +ILFICGGAF G++K
Sbjct: 197 RDVSGEGVQQALLKILEGTLASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFDGIDKI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R S+GFGA + +N LL+ + DL+ +GLIPEF+GR PI+V
Sbjct: 255 IQNRIGKKSLGFGAKIESNKDKD-------VGQLLKDILPQDLLKFGLIPEFVGRLPIVV 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L +L+++ LVQ+L EPKNAL +QY+K+F M++V L D+AL LIA+KA+ +NTGARGL
Sbjct: 308 TLQSLDKNALVQILTEPKNALVKQYQKLFEMDDVLLEIQDEALELIAEKAIERNTGARGL 367
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA+LE + M++IP ++V ++ KE + P
Sbjct: 368 RAILEEAMMGVMYDIP----SMTNVEKCIIGKEVIAEHSEP 404
>gi|291525458|emb|CBK91045.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Eubacterium
rectale DSM 17629]
Length = 423
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 199/413 (48%), Positives = 266/413 (64%), Gaps = 59/413 (14%)
Query: 54 ESETENGNRNRNS-EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGAC 112
E E +G+ +++S + +I+L TP+E+ LD++VIGQ++AKK
Sbjct: 46 EEEGVDGHEDKSSAKDDINLVTPEELKAFLDDYVIGQDQAKKV---------------LS 90
Query: 113 CAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPT 172
AVYNHYKR+ SD VEL+KSN+L++GPT
Sbjct: 91 VAVYNHYKRVLAGD-----TSD------------------------VELQKSNILMLGPT 121
Query: 173 GSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIV 232
GSGKTLLA+TLAR++NVPF I DAT LT+AGYVGED E++L KL+ AAD+D+E A+ GI+
Sbjct: 122 GSGKTLLAQTLARVINVPFAIADATTLTEAGYVGEDVENILLKLIQAADYDIERAEHGII 181
Query: 233 YIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPID 291
YIDE+DKI K+E+ + RDVSGEGVQQALLK+LEGT +VP P G RKHP+ + IPID
Sbjct: 182 YIDEIDKITKKSENVSITRDVSGEGVQQALLKILEGTEASVP-PQGG-RKHPQQELIPID 239
Query: 292 TKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGD 351
T +ILFICGGAF GLEK I R SSIGF + V++ L + D
Sbjct: 240 TTNILFICGGAFDGLEKIIDSRMDTSSIGFNSDVKSKTE-------LNVGEAFKHALPQD 292
Query: 352 LVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDA 411
V +GLIPEFIGR PI VSL AL+ D L+++L EPKN+L +QY K+F ++ V L FTDDA
Sbjct: 293 FVKFGLIPEFIGRVPITVSLEALDRDALIRILKEPKNSLIKQYTKLFELDGVGLEFTDDA 352
Query: 412 LRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+ IA KA+ + TGARGLRA++E ++ + M+ IP K S++ ++DK+ V
Sbjct: 353 VNAIADKALERKTGARGLRAIMEAVMLDLMYRIPSDK----SISKCVIDKDTV 401
>gi|166369014|ref|YP_001661287.1| ATP-dependent protease ATP-binding subunit ClpX [Microcystis
aeruginosa NIES-843]
gi|189044139|sp|B0JL96.1|CLPX_MICAN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166091387|dbj|BAG06095.1| ATP-dependent Clp protease ATPase subunit [Microcystis aeruginosa
NIES-843]
Length = 444
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 196/411 (47%), Positives = 262/411 (63%), Gaps = 50/411 (12%)
Query: 58 ENGNRNRNSEGNI---DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCA 114
E N+ R+ + +P P+EI K LD++VIGQ AKK A
Sbjct: 59 ERPNKRRSGQNKTTWEQIPKPREIKKHLDDYVIGQNEAKKV---------------LSVA 103
Query: 115 VYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGS 174
VYNHYKR+ QK +G + E+ +EL+KSN+LL+GPTGS
Sbjct: 104 VYNHYKRLKDIQTQK------------------AGGGSPEDS--IELQKSNILLIGPTGS 143
Query: 175 GKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYI 234
GKTLLA+TLA+I++VPF + DAT LT+AGYVGED E++L +LL AD DVE AQRGI+YI
Sbjct: 144 GKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGIIYI 203
Query: 235 DEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTK 293
DE+DKI K+E+ + RDVSGEGVQQALLKMLEGT+ NVP P G RKHP D I IDT
Sbjct: 204 DEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVP-PQGG-RKHPYQDCIQIDTS 261
Query: 294 DILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLV 353
+ILFICGGAFVGL+K I +R S+GF P G + V + LL+ + DLV
Sbjct: 262 NILFICGGAFVGLDKVIDQRLGKKSMGFIQP-----GDGQASKDKVAAGLLKQMTPDDLV 316
Query: 354 AYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALR 413
+G+IPEF+GR PIL +LS L+E+ L+ +L +P+NAL +QY+K+ M+NV+L F DA+
Sbjct: 317 KFGMIPEFVGRIPILAALSPLDEEALIAILTQPRNALVKQYQKLLKMDNVQLEFKSDAVL 376
Query: 414 LIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
IA++A + TGAR LR ++E ++ + M+E+P K V L+ +E V
Sbjct: 377 AIAQEAYRRKTGARALRGIVEELMLDVMYELPSRK----DVKRCLITREMV 423
>gi|425445343|ref|ZP_18825375.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9443]
gi|389734666|emb|CCI01692.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9443]
Length = 444
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 196/411 (47%), Positives = 262/411 (63%), Gaps = 50/411 (12%)
Query: 58 ENGNRNRNSEGNI---DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCA 114
E N+ R+ + +P P+EI K LD++VIGQ AKK A
Sbjct: 59 ERPNKRRSGQNKTTWEQIPKPREIKKYLDDYVIGQNEAKKV---------------LSVA 103
Query: 115 VYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGS 174
VYNHYKR+ QK +G N E+ +EL+KSN+LL+GPTGS
Sbjct: 104 VYNHYKRLKDIQTQK------------------AGGGNPEDS--IELQKSNILLIGPTGS 143
Query: 175 GKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYI 234
GKTLLA+TLA+I++VPF + DAT LT+AGYVGED E++L +LL AD DVE AQRGI+YI
Sbjct: 144 GKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGIIYI 203
Query: 235 DEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTK 293
DE+DKI K+E+ + RDVSGEGVQQALLKMLEGT+ NVP P G RKHP D I IDT
Sbjct: 204 DEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVP-PQGG-RKHPYQDCIQIDTS 261
Query: 294 DILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLV 353
+ILFICGGAFVGL+K I +R S+GF P + + V + LL+ + DLV
Sbjct: 262 NILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDSQA-----SKDKVAAGLLKQMTPDDLV 316
Query: 354 AYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALR 413
+G+IPEF+GR PIL +LS L+E+ L+ +L +P+NAL +QY+K+ M+NV+L F DA+
Sbjct: 317 KFGMIPEFVGRIPILAALSPLDEEALIAILTQPRNALVKQYQKLLKMDNVQLEFKSDAVL 376
Query: 414 LIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
IA++A + TGAR LR ++E ++ + M+E+P K V L+ +E V
Sbjct: 377 AIAQEAYRRKTGARALRGIVEELMLDVMYELPSRK----DVKRCLITREMV 423
>gi|317496811|ref|ZP_07955141.1| ATP-dependent Clp protease [Lachnospiraceae bacterium 5_1_63FAA]
gi|316895823|gb|EFV17975.1| ATP-dependent Clp protease [Lachnospiraceae bacterium 5_1_63FAA]
Length = 434
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 205/419 (48%), Positives = 266/419 (63%), Gaps = 58/419 (13%)
Query: 53 SESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGAC 112
SE E + ++G I+L PKEI + LD++VIGQ+ AKK
Sbjct: 46 SEIIEEEFEQYAENDGEINLRKPKEIKEFLDQYVIGQDEAKKV---------------LS 90
Query: 113 CAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPT 172
AVYNHYKRI ++G D VEL+KSN+L++GPT
Sbjct: 91 VAVYNHYKRI------------------LMGG-----------DSDVELQKSNILMLGPT 121
Query: 173 GSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIV 232
GSGKTLLA+TLA+++NVPF I DATALT+AGYVGED E++L K++ AAD+D++ AQ GI+
Sbjct: 122 GSGKTLLAQTLAKMLNVPFAIADATALTEAGYVGEDVENILLKIIQAADYDIDRAQCGII 181
Query: 233 YIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPID 291
YIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP + I ID
Sbjct: 182 YIDEIDKITRKSENTSITRDVSGEGVQQALLKIIEGTVASVP-PQGG-RKHPHQEFIQID 239
Query: 292 TKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGD 351
T +ILFICGGAF GLEK I R SIGFGA V T LL V D
Sbjct: 240 TSNILFICGGAFDGLEKIIESRIGKKSIGFGADVFGQKETD-------LGELLRQVLPED 292
Query: 352 LVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDA 411
V +GLIPEFIGR P+ VSL+ L+E LV++L EPK+AL +QY+++F M+ VKL F DDA
Sbjct: 293 FVKFGLIPEFIGRVPVNVSLNPLDEGALVRILKEPKSALVKQYQRLFEMDGVKLTFDDDA 352
Query: 412 LRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
L IAKKA+ + TGARGLRA++E ++ + M+EIP + V+ L+ K+ V + P
Sbjct: 353 LIAIAKKALERKTGARGLRAIMEGVIMDLMYEIP----SQTDVSECLITKDVVEGKEKP 407
>gi|374619901|ref|ZP_09692435.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [gamma
proteobacterium HIMB55]
gi|374303128|gb|EHQ57312.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [gamma
proteobacterium HIMB55]
Length = 425
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 197/405 (48%), Positives = 256/405 (63%), Gaps = 55/405 (13%)
Query: 67 EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSS 126
E + LP P+EI LD++VIGQ RAK+ AVYNHYKR+
Sbjct: 59 EASDKLPVPREINDILDQYVIGQSRAKRV---------------LSVAVYNHYKRLRT-- 101
Query: 127 LQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARI 186
G G S VEL KSN+LL+GPTGSGKTLLA+TLAR+
Sbjct: 102 ----------------GEGTNSD---------VELGKSNILLVGPTGSGKTLLAETLARM 136
Query: 187 VNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAES 245
++VPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++
Sbjct: 137 LDVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDN 196
Query: 246 RNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVG 305
+ RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT +ILFICGGAF G
Sbjct: 197 PSITRDVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTSNILFICGGAFAG 254
Query: 306 LEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRF 365
L+K I R IGF A V+A ++LV +++ DLV YGLIPEF+GR
Sbjct: 255 LDKVIQNRSDKGGIGFSADVKALADKKDFAESLV------DLEAEDLVQYGLIPEFVGRL 308
Query: 366 PILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTG 425
P++ +L L+ D LVQ+L EPKNAL +QY KMF M V++ F +D LR +A KAM + TG
Sbjct: 309 PMIATLEELDVDALVQILTEPKNALTKQYHKMFDMEGVEIDFREDGLRAVAAKAMERKTG 368
Query: 426 ARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
ARGLR++LEN+L E+M+ IP + V V+VD+ + P
Sbjct: 369 ARGLRSILENVLLESMYNIP----SQTGVAKVVVDESVINGDSEP 409
>gi|254361749|ref|ZP_04977884.1| S14 family endopeptidase ClpX [Mannheimia haemolytica PHL213]
gi|452745423|ref|ZP_21945258.1| ATP-dependent protease ATP-binding subunit ClpX [Mannheimia
haemolytica serotype 6 str. H23]
gi|153093284|gb|EDN74280.1| S14 family endopeptidase ClpX [Mannheimia haemolytica PHL213]
gi|452086572|gb|EME02960.1| ATP-dependent protease ATP-binding subunit ClpX [Mannheimia
haemolytica serotype 6 str. H23]
Length = 415
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 198/414 (47%), Positives = 264/414 (63%), Gaps = 56/414 (13%)
Query: 61 NRNRNSEGNI--DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNH 118
+ N++ EG+ ++PTP E+ LD++VIGQE AKK AVYNH
Sbjct: 51 DENQDDEGSFFTNVPTPHELHAHLDDYVIGQEHAKKV---------------LSVAVYNH 95
Query: 119 YKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTL 178
YKR+ + +S+H + VEL KSN+LL+GPTGSGKTL
Sbjct: 96 YKRL------RSALSNHQATNG------------------VELGKSNILLIGPTGSGKTL 131
Query: 179 LAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVD 238
LA+TLAR +NVPF + DAT LTQAGYVGED E+V+ KLL DF+ E A+RGIV+IDE+D
Sbjct: 132 LAETLARRLNVPFAVADATTLTQAGYVGEDVENVIQKLLMKCDFEAEQAERGIVFIDEID 191
Query: 239 KIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILF 297
KI K+ES + RDVSGEGVQQALLK+LEGTV N I G RKHP+G+ IP+DT ILF
Sbjct: 192 KITRKSESASITRDVSGEGVQQALLKLLEGTVAN--INPQGGRKHPKGETIPVDTSKILF 249
Query: 298 ICGGAFVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYG 356
ICGGAF GL+K + R IGF A ++ + LT+ L + V+ DLV +G
Sbjct: 250 ICGGAFAGLDKIVEARTNTQGGIGFAAALKKDKDRQDLTE------LFKQVEPEDLVKFG 303
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
LIPE IGR P++ L L+E+ L+Q+L EPKNA+ +QY+ +F M V+LHFT DAL IA
Sbjct: 304 LIPELIGRLPVVTPLQELDEEALIQILTEPKNAIIKQYQALFEMEGVELHFTKDALISIA 363
Query: 417 KKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+KA+++ TGARGLR+++EN+L + M+++P T + V + K V + D P
Sbjct: 364 QKAISRKTGARGLRSIVENLLLDTMYDLP-----TLNAKKVTIGKGCVENGDKP 412
>gi|440753637|ref|ZP_20932839.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Microcystis
aeruginosa TAIHU98]
gi|440173843|gb|ELP53212.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Microcystis
aeruginosa TAIHU98]
Length = 425
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 195/411 (47%), Positives = 262/411 (63%), Gaps = 50/411 (12%)
Query: 58 ENGNRNRNSEGNI---DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCA 114
E N+ R+ + +P P+EI K LD++VIGQ AKK A
Sbjct: 40 ERPNKRRSGQNKTTWEQIPKPREIKKHLDDYVIGQNEAKKV---------------LSVA 84
Query: 115 VYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGS 174
VYNHYKR+ QK +G + E+ +EL+KSN+LL+GPTGS
Sbjct: 85 VYNHYKRLKDIQTQK------------------AGGGSPEDS--IELQKSNILLIGPTGS 124
Query: 175 GKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYI 234
GKTLLA+TLA+I++VPF + DAT LT+AGYVGED E++L +LL AD DVE AQRGI+YI
Sbjct: 125 GKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGIIYI 184
Query: 235 DEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTK 293
DE+DKI K+E+ + RDVSGEGVQQALLKMLEGT+ NVP P G RKHP D I IDT
Sbjct: 185 DEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVP-PQGG-RKHPYQDCIQIDTS 242
Query: 294 DILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLV 353
+ILFICGGAFVGL+K I +R S+GF P G + V + LL+ + DLV
Sbjct: 243 NILFICGGAFVGLDKVIDQRLGKKSMGFIQP-----GDGQASKDKVAAGLLKQMTPDDLV 297
Query: 354 AYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALR 413
+G+IPEF+GR P+L +LS L+E+ L+ +L +P+NAL +QY+K+ M+NV+L F DA+
Sbjct: 298 KFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNALVKQYQKLLKMDNVQLEFKSDAVL 357
Query: 414 LIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
IA++A + TGAR LR ++E ++ + M+E+P K V L+ +E V
Sbjct: 358 AIAQEAYRRKTGARALRGIVEELMLDVMYELPSRK----DVKRCLITREMV 404
>gi|376259870|ref|YP_005146590.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Clostridium
sp. BNL1100]
gi|373943864|gb|AEY64785.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Clostridium
sp. BNL1100]
Length = 431
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 190/401 (47%), Positives = 264/401 (65%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
++P PKEI + LD++V+GQ+ AK+S AVYNHYKRI
Sbjct: 60 EIPKPKEIKEILDQYVVGQDTAKRS---------------LSVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
S VK+ + +EL+KSN++++GPTGSGKT LA+TLA+I+NVP
Sbjct: 97 ------------NSDVKTSD--------IELQKSNIVMLGPTGSGKTFLAQTLAKILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L +L+ AAD+D+E A++GI+YIDE+DKI K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLRLIQAADYDIEKAEKGIIYIDEIDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ +VP P G RKHP + I IDT +ILFICGGAF G++K
Sbjct: 197 RDVSGEGVQQALLKILEGTLASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFDGIDKI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R S+GFGA + +N LL+ + DL+ +GLIPEF+GR PI+V
Sbjct: 255 IQNRIGKKSLGFGAKIESNKDKD-------VGQLLKDILPQDLLKFGLIPEFVGRLPIVV 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L +L+++ LVQ+L EPKNAL +QY+K+F M++V L D+AL LIA+KA+ +NTGARGL
Sbjct: 308 TLQSLDKNALVQILTEPKNALVKQYQKLFEMDDVILEIQDEALELIAEKAIERNTGARGL 367
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA+LE + M++IP ++V ++ KE + P
Sbjct: 368 RAILEEAMMGVMYDIP----SMTNVEKCIIGKEVIAEHSEP 404
>gi|422302999|ref|ZP_16390355.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9806]
gi|389792059|emb|CCI12153.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9806]
Length = 444
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 197/411 (47%), Positives = 263/411 (63%), Gaps = 50/411 (12%)
Query: 58 ENGNRNRNSEGNI---DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCA 114
E N+ R+ + +P P+EI K LD++VIGQ AKK A
Sbjct: 59 ERPNKRRSGQNKTTWEQIPKPREIKKYLDDYVIGQNEAKKV---------------LSVA 103
Query: 115 VYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGS 174
VYNHYKR+ QK SG GN ++ +EL+KSN+LL+GPTGS
Sbjct: 104 VYNHYKRLKDIQTQK-------------ASG---GN----PEDSIELQKSNILLIGPTGS 143
Query: 175 GKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYI 234
GKTLLA+TLA+I++VPF + DAT LT+AGYVGED E++L +LL AD DVE AQRGI+YI
Sbjct: 144 GKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGIIYI 203
Query: 235 DEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTK 293
DE+DKI K+E+ + RDVSGEGVQQALLKMLEGT+ NVP P G RKHP D I IDT
Sbjct: 204 DEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVP-PQGG-RKHPYQDCIQIDTS 261
Query: 294 DILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLV 353
+ILFICGGAFVGL+K I +R S+GF P G + V + LL+ + DLV
Sbjct: 262 NILFICGGAFVGLDKVIDQRLGKKSMGFIQP-----GDGQASKDKVAAGLLKQMTPDDLV 316
Query: 354 AYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALR 413
+G+IPEF+GR P+L +LS L+E+ L+ +L +P+NAL +QY+K+ M+NV+L F DA+
Sbjct: 317 KFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNALVKQYQKLLKMDNVQLEFKSDAVL 376
Query: 414 LIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
IA++A + TGAR LR ++E ++ + M+E+P K V L+ +E V
Sbjct: 377 AIAQEAYRRKTGARALRGIVEELMLDVMYELPSRK----DVKRCLITREMV 423
>gi|323495055|ref|ZP_08100144.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
brasiliensis LMG 20546]
gi|323310712|gb|EGA63887.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
brasiliensis LMG 20546]
Length = 427
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 256/401 (63%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P++I LD++VIGQ+ AKK AVYNHYKR+
Sbjct: 65 LPVPRDIRAHLDDYVIGQDYAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 ---------------RNGDTTSEG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR+ T L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVATGTGIGFGAEVRSKDETK------TVGELFMQVEPEDLVKYGLIPEFIGRLPVTT 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+ED L+Q+L EPKNAL +QY +F + N +L F +DALR IAKKAM + TGARGL
Sbjct: 315 TLTELDEDALIQILCEPKNALTKQYAALFELENSELEFREDALRAIAKKAMERKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P + V+ V++D+ + P
Sbjct: 375 RSILEGVLLETMYELPSME----DVSKVVIDESVIKGESEP 411
>gi|392548929|ref|ZP_10296066.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudoalteromonas
rubra ATCC 29570]
Length = 427
Score = 353 bits (907), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 260/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P+EI LD++VIGQE AKK AVYNHYKR+ + L+ +
Sbjct: 67 LPVPREIRNHLDDYVIGQEHAKKV---------------LSVAVYNHYKRLKNQGLKGD- 110
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 111 ---------------------------VELGKSNILLIGPTGSGKTLLAETLARLLDVPF 143
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 144 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 203
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 204 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 261
Query: 311 SERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R ++ IGFGA V+++ L S + V+ DLV YGLIPEFIGR P++
Sbjct: 262 EQRSHTNTGIGFGAQVKSSDSERSL------SETFKDVEPEDLVKYGLIPEFIGRLPVVA 315
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+ED L+Q+L EPKNAL +QY +F M V+L F +DALR IA KAM + TGARGL
Sbjct: 316 TLAELDEDALIQILNEPKNALTKQYGALFKMEGVELEFREDALRAIAHKAMERKTGARGL 375
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E +L + M+++P + V+ V+VD+ + P
Sbjct: 376 RSIVEGVLLDTMYDLPSIE----DVSKVVVDETVIKGESDP 412
>gi|375084539|ref|ZP_09731404.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Megamonas
funiformis YIT 11815]
gi|374568043|gb|EHR39236.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Megamonas
funiformis YIT 11815]
Length = 417
Score = 353 bits (907), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 194/385 (50%), Positives = 259/385 (67%), Gaps = 55/385 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LP P+EI L+++VIGQ+ AKKS AVYNHYKRI + Q +
Sbjct: 60 ELPKPREIYDVLNQYVIGQDEAKKS---------------LSVAVYNHYKRINRVTKQDD 104
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
VEL+KSN+L++GPTGSGKTLLA+TLA+I+NVP
Sbjct: 105 ----------------------------VELQKSNILMLGPTGSGKTLLAQTLAKILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD D+E AQ+GI+YIDE+DKI K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQAADNDIEQAQKGIIYIDEIDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN-IPIDTKDILFICGGAFVGLEK 308
RDVSGEGVQQALLK+LEGT+ +VP P G RKHP + + IDT +ILFICGGAF G+EK
Sbjct: 197 RDVSGEGVQQALLKILEGTIASVP-PQGG-RKHPHQEGMLQIDTTNILFICGGAFDGIEK 254
Query: 309 TISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I R S+GFGA +++ + T +L++V DL+ GLIPEFIGR P++
Sbjct: 255 IIDARLGKKSLGFGADIKSKRKQ-------TTGEILKNVLPEDLLKCGLIPEFIGRVPVV 307
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
V+L +L ED LV +L++PKNAL +QY K+ M+ VKLHF ++AL LIAK+A+ + TGARG
Sbjct: 308 VTLESLTEDALVDILVKPKNALVKQYGKLLEMDGVKLHFDEEALHLIAKEALERKTGARG 367
Query: 429 LRALLENILTEAMFEIPETKIGTSS 453
LR+++E I+ + MFEIP +K+G S
Sbjct: 368 LRSIIERIMRDVMFEIP-SKMGAVS 391
>gi|359407411|ref|ZP_09199888.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [SAR116
cluster alpha proteobacterium HIMB100]
gi|356677450|gb|EHI49794.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [SAR116
cluster alpha proteobacterium HIMB100]
Length = 421
Score = 353 bits (907), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 199/416 (47%), Positives = 273/416 (65%), Gaps = 60/416 (14%)
Query: 56 ETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAV 115
E G N++ EG +P+P +I K LD++VIGQ +AK+ IL AV
Sbjct: 49 EEHKGAVNKHHEG---VPSPSDINKVLDDYVIGQTKAKR-----IL----------SVAV 90
Query: 116 YNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSG 175
+NHYKR+ + K+G+ +E++KSN+LL+GPTG G
Sbjct: 91 HNHYKRLANEG--------------------KTGD--------LEIQKSNILLVGPTGCG 122
Query: 176 KTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYID 235
KTLLA++LAR+++VPFT+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYID
Sbjct: 123 KTLLAQSLARMLDVPFTMADATTLTEAGYVGEDVENIILKLLQASDYNVEKAQRGIVYID 182
Query: 236 EVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKD 294
EVDKI K+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +
Sbjct: 183 EVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTN 240
Query: 295 ILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVA 354
ILFICGGAF GL+K IS R + IGFGA VR S +L ++ DL+
Sbjct: 241 ILFICGGAFAGLDKLISSRNSGAGIGFGADVRDPEDRN-------LSQILVDLEPEDLIK 293
Query: 355 YGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRL 414
+GLIPEFIGR P++ +L L+ED LV++L EPKNAL +QYK +F M+ V L F DDAL+
Sbjct: 294 FGLIPEFIGRLPVIATLEDLDEDALVRILTEPKNALTKQYKALFDMDGVNLDFRDDALKA 353
Query: 415 IAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
IA+KA+ + TGARGLR++LE IL + MFEIP S++ V+++++ V P
Sbjct: 354 IARKAIERKTGARGLRSILEMILMDPMFEIPT----ASNIQDVVINEDVVKGTTPP 405
>gi|366162939|ref|ZP_09462694.1| ATP-dependent protease ATP-binding subunit ClpX [Acetivibrio
cellulolyticus CD2]
Length = 431
Score = 353 bits (907), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 188/376 (50%), Positives = 254/376 (67%), Gaps = 53/376 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P P EI + LD++VIGQE AKKS AVYNHYKRI
Sbjct: 60 DVPKPAEIKEILDQYVIGQESAKKS---------------LSVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N +++ + VEL+KSN++++GPTGSGKTLLA+TLARI+NVP
Sbjct: 97 -------------------NTDIKGSD-VELQKSNIIMLGPTGSGKTLLAQTLARILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E A++GI+YIDE+DKI K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAEKGIIYIDEIDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFICGGAF G++K
Sbjct: 197 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFDGIDKI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R S+GFGA + + + +L+ + DL+ +GLIPEF+GR P++V
Sbjct: 255 IQNRIGKKSMGFGAKIESQ-------KTIDMGEILKHIYPQDLLKFGLIPEFVGRLPVMV 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SL +L++ L+Q+L EPKNAL +QY+K+F M+ V+L F AL IA+K++ +NTGARGL
Sbjct: 308 SLQSLDKAALIQILTEPKNALVKQYQKLFEMDEVELEFETGALEAIAEKSIERNTGARGL 367
Query: 430 RALLENILTEAMFEIP 445
RA++E I+ E M++IP
Sbjct: 368 RAIIEEIMLEVMYDIP 383
>gi|354598749|ref|ZP_09016766.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brenneria sp.
EniD312]
gi|353676684|gb|EHD22717.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brenneria sp.
EniD312]
Length = 425
Score = 353 bits (907), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 202/423 (47%), Positives = 272/423 (64%), Gaps = 63/423 (14%)
Query: 51 IESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIG 110
I E + + +R R++ LPTP EI + LD++VIGQE+AKK
Sbjct: 48 IREEIKEVSPHRERSA-----LPTPHEIRRHLDDYVIGQEQAKKV--------------- 87
Query: 111 ACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMG 170
AVYNHYKR+ N +V ++ I EL KSN+LL+G
Sbjct: 88 LAVAVYNHYKRLR--------------------------NGDVASNGI-ELGKSNILLIG 120
Query: 171 PTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRG 230
PTGSGKTLLA+TLAR ++VPFT+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRG
Sbjct: 121 PTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRG 180
Query: 231 IVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIP 289
IVYIDE+DKI K+++ + RDVSGEGVQQALLK++EGT+ VP P G RKHP+ + +
Sbjct: 181 IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQ 238
Query: 290 IDTKDILFICGGAFVGLEKTISERRQDS--SIGFGAPVRANMRTGGLTDALVTSSLLESV 347
+DT ILFICGGAF GL+K I E+R D+ IGFGA V+ G + LL V
Sbjct: 239 VDTSKILFICGGAFAGLDKVI-EQRTDTGRGIGFGATVK------GSAEKATEGELLGQV 291
Query: 348 DSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHF 407
+ GDL+ +GLIPEFIGR P++ +L L+ED L+Q+L EPKNAL +QY+ +F++ V L F
Sbjct: 292 EPGDLIKFGLIPEFIGRLPVVATLRELSEDALIQILREPKNALTKQYQALFNLEGVDLEF 351
Query: 408 TDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSV 467
D+AL IAKKAMA+ TGARGLR+++E L E M+++P + SV+ V++D+ +
Sbjct: 352 RDEALTAIAKKAMARKTGARGLRSIVEAALLETMYDLPSLE----SVDKVVIDESVIAGQ 407
Query: 468 DAP 470
P
Sbjct: 408 SEP 410
>gi|88800032|ref|ZP_01115602.1| ATP-dependent protease ATP-binding subunit [Reinekea blandensis
MED297]
gi|88777158|gb|EAR08363.1| ATP-dependent protease ATP-binding subunit [Reinekea blandensis
MED297]
Length = 392
Score = 353 bits (907), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 194/400 (48%), Positives = 259/400 (64%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LDE+VIGQ+RAK M++ V AVYNHYKR+ +
Sbjct: 31 LPVPSEIRSTLDEYVIGQDRAK----------MVLSV-----AVYNHYKRLQY------- 68
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G N + VEL KSN+LL+GPTGSGKTLLA+T+AR++NVPF
Sbjct: 69 -----------------GEANSD----VELSKSNILLIGPTGSGKTLLAETMARLLNVPF 107
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 108 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITR 167
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 168 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTANILFICGGAFAGLEKVI 225
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A V+ D S++ +V+ DLV YGLIPEFIGR P++ +
Sbjct: 226 QNRTDKGGIGFNAEVKKK-------DDRKLGSVIANVEPEDLVKYGLIPEFIGRLPVVAT 278
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L+E LVQ+L PKN+L +QY+K+F M +V+L + AL+ +A KAM +NTGARGLR
Sbjct: 279 LTELDEAALVQILTTPKNSLVKQYQKLFEMESVELDIRESALKAVANKAMERNTGARGLR 338
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LEN+L + M+ +P +V V++D+ + P
Sbjct: 339 SILENVLLDTMYRVP----SEDNVTKVVIDESVISGESEP 374
>gi|407793808|ref|ZP_11140839.1| ATP-dependent protease ATP-binding subunit ClpX [Idiomarina
xiamenensis 10-D-4]
gi|407213962|gb|EKE83813.1| ATP-dependent protease ATP-binding subunit ClpX [Idiomarina
xiamenensis 10-D-4]
Length = 425
Score = 353 bits (907), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 196/403 (48%), Positives = 260/403 (64%), Gaps = 59/403 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LP PK+I LD++VIGQE AKK AVYNHYKR+ ++ QK+
Sbjct: 63 ELPVPKQIRHHLDDYVIGQELAKKV---------------LSVAVYNHYKRLRTNAKQKD 107
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+EL KSN+LL+GPTGSGKT LA+TLAR ++VP
Sbjct: 108 Q---------------------------IELGKSNILLIGPTGSGKTFLAETLARFLDVP 140
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
FT+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+E+ +
Sbjct: 141 FTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSENPSIT 200
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT ILFICGGAF GL K
Sbjct: 201 RDVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLNKV 258
Query: 310 ISER-RQDSSIGFGAPVRA-NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPI 367
I +R + IGFGA V++ N R G ++ V+ DLV YGLIPEFIGR P+
Sbjct: 259 IEQRLATGTGIGFGADVKSKNQRAEG--------EVIAQVEPEDLVRYGLIPEFIGRLPV 310
Query: 368 LVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGAR 427
+ +L+ L+ED LVQ+L EPKNAL +QY +F M +V+L F +DALR IA+KAM + TGAR
Sbjct: 311 VATLNELDEDALVQILSEPKNALTKQYSALFEMEDVELEFREDALRAIARKAMERKTGAR 370
Query: 428 GLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
GLR+++E +L M+E+P + V+ V++D+ + P
Sbjct: 371 GLRSIVEAVLLNIMYELPSMQ----DVSKVVIDESVIKGESDP 409
>gi|381393571|ref|ZP_09919292.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
punicea DSM 14233 = ACAM 611]
gi|379330787|dbj|GAB54425.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
punicea DSM 14233 = ACAM 611]
Length = 424
Score = 353 bits (907), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 261/401 (65%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE AKK AVYNHYKR+
Sbjct: 65 LPTPSEIHAHLDDYVIGQEHAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G+ + E VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 ---------------KNGDVH----EGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+D E AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDPEKAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 202 DVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKII 259
Query: 311 SERR-QDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + S IGFGA V+A +D S L + V+ DLV YGLIPEFIGR P++
Sbjct: 260 EQRSAKGSGIGFGAEVKAQ------SDKKNLSELFKDVEPQDLVKYGLIPEFIGRLPVVA 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SL L+ED L+Q+L EPKNA+ +QY + ++ V+L F +DALR IA KAM + TGARGL
Sbjct: 314 SLEELSEDALIQILQEPKNAITKQYGALLALEGVELEFREDALRAIASKAMTRKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E +L + M+++P +V V++D+ + AP
Sbjct: 374 RSIVEAVLLDTMYDLP----SNPNVAKVVIDETVIRGESAP 410
>gi|148652117|ref|YP_001279210.1| ATP-dependent protease ATP-binding subunit ClpX [Psychrobacter sp.
PRwf-1]
gi|172048458|sp|A5WC69.1|CLPX_PSYWF RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|148571201|gb|ABQ93260.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Psychrobacter
sp. PRwf-1]
Length = 425
Score = 353 bits (907), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 197/428 (46%), Positives = 270/428 (63%), Gaps = 49/428 (11%)
Query: 44 KDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVD 103
++G+ N ++SE N + LPTPKEI + LD +VIGQE AKK+
Sbjct: 43 EEGDLNTVDSEDGEVNTWLTKK------LPTPKEIREHLDGYVIGQETAKKA-------- 88
Query: 104 MLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEK 163
AVYNHYKR L V + L K +D +VEL K
Sbjct: 89 -------LSVAVYNHYKR--------------LKVAAKLAEDKKQAKLGA-DDAMVELSK 126
Query: 164 SNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFD 223
SN+LL+GPTGSGKTLLA+TLAR+++VPF + DAT LT+AGYVGED E+++ KLL AAD+D
Sbjct: 127 SNILLIGPTGSGKTLLAQTLARMLDVPFAMADATTLTEAGYVGEDVENIVQKLLQAADYD 186
Query: 224 VEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKH 282
VE A++GI+Y+DE+DKI K E+ + RDVSGEGVQQALLK++EGTV IP +G RKH
Sbjct: 187 VEKAEQGIIYVDEIDKISKKGENMSITRDVSGEGVQQALLKLIEGTV--AAIPPHGGRKH 244
Query: 283 PRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSS 342
P + I +DT +IL I GGAF GL+K I +R + + IGF A V++ D S
Sbjct: 245 PNQELIQVDTSNILIIVGGAFSGLDKVIQQRTEKTGIGFNAEVKSK------DDGKQLSE 298
Query: 343 LLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNN 402
L + V+ DL+ +GLIPE IGR P++ +L L+E+ L+Q+L EPKNA+ +QY+ +F M +
Sbjct: 299 LFKQVEPEDLIKFGLIPELIGRLPVIATLEELDEEALMQILTEPKNAIVKQYQYLFEMED 358
Query: 403 VKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKE 462
+L FT+ L+ IA KAM + TGARGLR+++EN L + M+E+P S V+VD++
Sbjct: 359 AELSFTEAGLKAIAHKAMERKTGARGLRSIVENALLDTMYELP----SMSDAKQVVVDED 414
Query: 463 AVGSVDAP 470
+ AP
Sbjct: 415 VINEGAAP 422
>gi|388547448|ref|ZP_10150713.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
M47T1]
gi|388274535|gb|EIK94132.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
M47T1]
Length = 427
Score = 353 bits (907), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 195/400 (48%), Positives = 255/400 (63%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + + VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 101 ------------------NQRDKKGDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTAGGIGFNAEVRSKQEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +A +A+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRTDALKSVAHRALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP + V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIP----SQTDVSKVVIDESVIEGKSKP 410
>gi|114567170|ref|YP_754324.1| ATP-dependent protease ATP-binding subunit ClpX [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
gi|114338105|gb|ABI68953.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
Length = 416
Score = 353 bits (907), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 189/376 (50%), Positives = 254/376 (67%), Gaps = 53/376 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P P++I + LD++VIGQ+RAKKS AVYNHYKRI
Sbjct: 60 DIPKPQDIREILDDYVIGQDRAKKS---------------LAVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N ++ D+ VEL+KSN++++GPTGSGKTLLA+TLARI+NVP
Sbjct: 97 -------------------NLGMKLDD-VELQKSNIMMLGPTGSGKTLLAQTLARILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ +AD+D+E A++GI+YIDE+DKI K ++ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQSADYDIEKAEKGIIYIDEIDKIARKTDNPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFICGGAF G++K
Sbjct: 197 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTSNILFICGGAFEGIDKI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R +GFGA +++ +L + DL+ YGLIPEF+GR PI+V
Sbjct: 255 IENRVGQKVMGFGADIKSREEKK-------IGEILNMILPQDLLKYGLIPEFVGRVPIIV 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+ D L+ +L EPKNAL +QYKK+F ++ V L F +DAL+ IA +A+ +NTGARGL
Sbjct: 308 TLEALDMDALISILTEPKNALVKQYKKLFELDGVDLEFKEDALQAIADEALRRNTGARGL 367
Query: 430 RALLENILTEAMFEIP 445
RA++E+I+ E M+EIP
Sbjct: 368 RAIIEDIMLEVMYEIP 383
>gi|238923370|ref|YP_002936886.1| ATP-dependent protease ATP-binding subunit [Eubacterium rectale
ATCC 33656]
gi|259491258|sp|C4ZGF5.1|CLPX_EUBR3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238875045|gb|ACR74752.1| ATP-dependent protease ATP-binding subunit [Eubacterium rectale
ATCC 33656]
Length = 423
Score = 353 bits (907), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 199/413 (48%), Positives = 266/413 (64%), Gaps = 59/413 (14%)
Query: 54 ESETENGNRNRNS-EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGAC 112
E E +G+ +++S + +I+L TP+E+ LD++VIGQ++AKK
Sbjct: 46 EEEGVDGHEDKSSAKDDINLVTPEELKAFLDDYVIGQDQAKKV---------------LS 90
Query: 113 CAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPT 172
AVYNHYKR+ SD VEL+KSN+L++GPT
Sbjct: 91 VAVYNHYKRVLAGD-----TSD------------------------VELQKSNILMLGPT 121
Query: 173 GSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIV 232
GSGKTLLA+TLAR++NVPF I DAT LT+AGYVGED E++L KL+ AAD+D+E A+ GI+
Sbjct: 122 GSGKTLLAQTLARVINVPFAIADATTLTEAGYVGEDVENILLKLIQAADYDIERAEHGII 181
Query: 233 YIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPID 291
YIDE+DKI K+E+ + RDVSGEGVQQALLK+LEGT +VP P G RKHP+ + IPID
Sbjct: 182 YIDEIDKITKKSENVSITRDVSGEGVQQALLKILEGTEASVP-PQGG-RKHPQQELIPID 239
Query: 292 TKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGD 351
T +ILFICGGAF GLEK I R SSIGF + V++ L + D
Sbjct: 240 TTNILFICGGAFDGLEKIIDSRMDTSSIGFNSDVKSKTE-------LNVGEAFKHALPQD 292
Query: 352 LVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDA 411
V +GLIPEFIGR PI VSL AL+ D L+++L EPKN+L +QY K+F ++ V L FTDDA
Sbjct: 293 FVKFGLIPEFIGRVPITVSLEALDRDALIRILKEPKNSLIKQYTKLFELDGVGLEFTDDA 352
Query: 412 LRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+ IA KA+ + TGARGLRA++E ++ + M+ IP K S++ ++DK+ V
Sbjct: 353 VNAIADKALERKTGARGLRAIMEAVMLDLMYRIPSDK----SISKCVIDKDTV 401
>gi|336449970|ref|ZP_08620427.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Idiomarina
sp. A28L]
gi|336283127|gb|EGN76334.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Idiomarina
sp. A28L]
Length = 425
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 194/405 (47%), Positives = 263/405 (64%), Gaps = 58/405 (14%)
Query: 68 GNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSL 127
G LPTPKEI + LD++VIGQ+ AK+ AVYNHYKR+
Sbjct: 62 GEDQLPTPKEIRQHLDDYVIGQDHAKRV---------------LAVAVYNHYKRLR---- 102
Query: 128 QKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIV 187
N V ++ +EL KSN+LL+GPTGSGKTLLA+TLAR +
Sbjct: 103 ----------------------NAGVHDN--IELGKSNILLIGPTGSGKTLLAETLARFL 138
Query: 188 NVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESR 246
+VPFT+ DAT LT+AGYVGED E+++ KLL D+D A+RGIVYIDE+DKI K+++
Sbjct: 139 DVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDAAKAERGIVYIDEIDKISRKSDNP 198
Query: 247 NNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGL 306
+ RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT ILF+CGGAF GL
Sbjct: 199 SITRDVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFVQVDTSKILFVCGGAFSGL 256
Query: 307 EKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRF 365
EK + +R S IGFGA ++++ + + +LL V+ DLV YGLIPEFIGR
Sbjct: 257 EKVVQQRLATGSGIGFGAKLKSSSDSNQV-------NLLTQVEPEDLVKYGLIPEFIGRL 309
Query: 366 PILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTG 425
P+L SL+ L+ED LVQ+L EPKNA+ +QY + M NV+L F +DALR IAKKAM + TG
Sbjct: 310 PVLASLTELDEDALVQILGEPKNAITKQYAALLDMENVELEFREDALRAIAKKAMQRKTG 369
Query: 426 ARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
ARGLR+++E++L M+E+P ++V+ V++D+ + P
Sbjct: 370 ARGLRSIVEDVLLSTMYELP----SMTNVSKVVIDETVITGESDP 410
>gi|334704789|ref|ZP_08520655.1| ATP-dependent protease ATP-binding subunit ClpX [Aeromonas caviae
Ae398]
Length = 424
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 196/402 (48%), Positives = 262/402 (65%), Gaps = 57/402 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTP EI LD++VIGQE AKK AVYNHYKR
Sbjct: 63 ELPTPHEIRAHLDDYVIGQEYAKKV---------------LAVAVYNHYKR--------- 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
L SG +SG VEL KSN+LL+GPTGSGKTLLA+TLAR+++VP
Sbjct: 99 -----------LRSGSESGG--------VELGKSNILLIGPTGSGKTLLAETLARLLDVP 139
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
FT+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ +
Sbjct: 140 FTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSIT 199
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT ILFICGGAF GL+K
Sbjct: 200 RDVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKV 257
Query: 310 ISERR-QDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I +R + + IGFGA V++ L++ V+ DL+ YGLIPEFIGR P++
Sbjct: 258 IEQRSVKGTGIGFGAEVKSKNAKATLSENFA------KVEPEDLIKYGLIPEFIGRLPVV 311
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L+ L+E L+Q+L EPKNAL +QY +F++ V+L F DDAL IA+KAM + TGARG
Sbjct: 312 ATLTELDEAALIQILKEPKNALTKQYAALFALEEVELEFRDDALNAIARKAMERKTGARG 371
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E +L + M+++P K V+ V++D+ + AP
Sbjct: 372 LRSIVEAVLLDTMYDLPSLK----GVSKVVIDETVIKGDSAP 409
>gi|71729634|gb|EAO31738.1| ClpX, ATPase regulatory subunit [Xylella fastidiosa Ann-1]
Length = 426
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 200/424 (47%), Positives = 270/424 (63%), Gaps = 62/424 (14%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E R+S LP PKEI + LD++VIGQ+RAK++
Sbjct: 48 NDIIREELEEKSQSARSS-----LPKPKEILEVLDQYVIGQQRAKRT------------- 89
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKRI S H +ND+I EL KSN+LL
Sbjct: 90 --LAVAVYNHYKRIE---------SRH------------------KNDDI-ELAKSNILL 119
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ
Sbjct: 120 VGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQ 179
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
GIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ +
Sbjct: 180 HGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEF 237
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLES 346
+ +DTK+ILFICGGAF GL+K I +R + IGFG V+++ + +L
Sbjct: 238 LQVDTKNILFICGGAFAGLDKVIQQRCTEVGGIGFGVKVKSSESKRDV------GKVLAG 291
Query: 347 VDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLH 406
V+ DL+ +GLIPEF+GR P++ +L L+E LV++L EPKNA+ +Q+KK+F M NV+L
Sbjct: 292 VEPEDLIKFGLIPEFVGRLPVVATLDELDESALVKILTEPKNAITKQFKKLFEMENVELE 351
Query: 407 FTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
F DAL +A+KA+ + TGARGLR ++E +L + M+E+P ++ V+VD+ + +
Sbjct: 352 FRQDALSAVARKALKRKTGARGLRTIVELVLLDTMYELP----SQEGISKVVVDESVIEN 407
Query: 467 VDAP 470
P
Sbjct: 408 KSEP 411
>gi|343496563|ref|ZP_08734659.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
nigripulchritudo ATCC 27043]
gi|342821176|gb|EGU55970.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
nigripulchritudo ATCC 27043]
Length = 426
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 261/401 (65%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP+EI + LD++VIGQ+ AKK AVYNHYKR+
Sbjct: 65 LPTPREIREHLDDYVIGQDYAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 ---------------RNGDTTSEG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLVEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA +R+ T L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRTATGTGIGFGADIRSKDET------RTVGELFTQVEPEDLVKYGLIPEFIGRLPVTT 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E L+Q+L EPKNAL +QY +F + +V+L F +DAL+ IAKKAM + TGARGL
Sbjct: 315 TLTELDEAALIQILCEPKNALTKQYAALFDLEDVELEFREDALKAIAKKAMDRKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE++L E M+E+P ++ +V+ V++D+ + P
Sbjct: 375 RSILESVLLETMYELPSSE----NVSKVVIDEAVIQGESDP 411
>gi|386388772|ref|ZP_10073625.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Haemophilus
paraphrohaemolyticus HK411]
gi|385697286|gb|EIG27721.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Haemophilus
paraphrohaemolyticus HK411]
Length = 414
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 194/392 (49%), Positives = 251/392 (64%), Gaps = 49/392 (12%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
++PTP E+ L+++VIGQE AKK AVYNHYKR+
Sbjct: 62 NVPTPHELHAHLNDYVIGQEHAKKV---------------LSVAVYNHYKRL-------- 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
KS N E VEL KSN+LL+GPTGSGKTLLA+TLAR +NVP
Sbjct: 99 ----------------KSALSNHEVTNGVELGKSNILLIGPTGSGKTLLAETLARRLNVP 142
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LTQAGYVGED E+V+ KLL DFD E A+RGIV+IDE+DKI K+ES +
Sbjct: 143 FAVADATTLTQAGYVGEDVENVIQKLLMKCDFDAEQAERGIVFIDEIDKITRKSESASIT 202
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV N I G RKHP+G+ IP+DT ILFICGGAF GL+K
Sbjct: 203 RDVSGEGVQQALLKLLEGTVAN--INPQGSRKHPKGETIPVDTSKILFICGGAFAGLDKI 260
Query: 310 ISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
+ R + IGF A ++ + LT+ L + V+ DLV +GLIPE IGR P++
Sbjct: 261 VEARTNKQGGIGFAAELKNDKDRQDLTE------LFKQVEPEDLVRFGLIPELIGRLPVV 314
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
L L+E L+Q+L EPKNA+ +QY+ +F M NV+L FT +AL IAKKA+A+ TGARG
Sbjct: 315 TPLQELDEHALIQILTEPKNAIIKQYQALFQMENVELEFTQEALVAIAKKAIARKTGARG 374
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVD 460
LR+++EN+L + M+++P K +V ++
Sbjct: 375 LRSIVENLLLDTMYDLPTLKAKKVTVGQACIE 406
>gi|149192522|ref|ZP_01870700.1| ATP-dependent protease ATP-binding subunit [Vibrio shilonii AK1]
gi|148833642|gb|EDL50701.1| ATP-dependent protease ATP-binding subunit [Vibrio shilonii AK1]
Length = 417
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 257/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP++I LD++VIGQ+ AKK AVYNHYKR+
Sbjct: 56 LPTPRDIRAHLDDYVIGQDYAKKV---------------LSVAVYNHYKRL--------- 91
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ + VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 92 ---------------RNGDTTADG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 133
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 134 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 193
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 194 DVSGEGVQQALLKLVEGTIASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 251
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR+ T L V+ DLV YGLIPEFIGR P+
Sbjct: 252 DQRVATGTGIGFGAEVRSKDETK------TVGELFTQVEPEDLVKYGLIPEFIGRLPVTT 305
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+ED L+Q+L EPKNAL +QY +F + V+L F +DALR IAKKAM + TGARGL
Sbjct: 306 TLTELDEDALIQILNEPKNALTKQYGALFDLEGVELEFREDALRAIAKKAMERKTGARGL 365
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P + V+ V++D+ + P
Sbjct: 366 RSILEGVLLETMYELP----SATDVSKVVIDESVINGESEP 402
>gi|78043800|ref|YP_359189.1| ATP-dependent protease ATP-binding subunit ClpX [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995915|gb|ABB14814.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Carboxydothermus hydrogenoformans Z-2901]
Length = 418
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 193/379 (50%), Positives = 249/379 (65%), Gaps = 53/379 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LP P+EI LD++VIGQE AKK AVYNHYKRI
Sbjct: 56 ELPKPQEIKAYLDQYVIGQEEAKKV---------------LAVAVYNHYKRIN------- 93
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
LG + VEL KSN+L++GPTGSGKTLLA+TLAR +NVP
Sbjct: 94 -----------LGGKIDD----------VELSKSNILMLGPTGSGKTLLAQTLARFLNVP 132
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DATALT+AGYVGED E++L KL+ AD+D+E A++GIVYIDE+DKI K+E+ +
Sbjct: 133 FAIADATALTEAGYVGEDVENILLKLIQNADYDIERAEKGIVYIDEIDKIARKSENPSIT 192
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ +VP P G RKHP + I IDT +ILFI GGAF G+EK
Sbjct: 193 RDVSGEGVQQALLKILEGTIASVP-PQGG-RKHPHQEFIQIDTTNILFIVGGAFEGIEKI 250
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R +GFGA ++ +L+ + DL+ +GLIPEF+GR PI+V
Sbjct: 251 IQNRIGKKGLGFGAEIKPKREQN-------VGEILKHIMPEDLLKFGLIPEFVGRLPIIV 303
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+ED LV++L EPKNAL +QY+K+F ++ V L F +DALR IA+KA+ +NTGARGL
Sbjct: 304 TLDALDEDALVRILTEPKNALIKQYQKLFELDGVTLEFEEDALRAIAQKAIKRNTGARGL 363
Query: 430 RALLENILTEAMFEIPETK 448
RA+LE ++ + M+EIP K
Sbjct: 364 RAILEEVMLDVMYEIPSRK 382
>gi|319404100|emb|CBI77690.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Bartonella
rochalimae ATCC BAA-1498]
Length = 398
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 197/411 (47%), Positives = 264/411 (64%), Gaps = 68/411 (16%)
Query: 36 EIMGGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKS 95
E+ IR++ +S+GI++ +PTP+EI LD++VIGQ AK+
Sbjct: 18 ELCMDIIREENKSSGIKARD---------------GVPTPQEILTVLDDYVIGQRHAKRV 62
Query: 96 HIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEN 155
AV+NHYKR+ H S KS +
Sbjct: 63 ---------------LSVAVHNHYKRLAHQS--------------------KSSD----- 82
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
VEL KSN+LL+GPTG GKT LA+TLARI++VPFT+ DAT LT+AGYVGED E+++ K
Sbjct: 83 ---VELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILK 139
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
LL +AD++VE AQRGIVYIDEVDKI KA++ + RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 140 LLQSADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVP- 198
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
P G RKHP+ + + +DT +ILFICGGAF GLEK IS R + +SIGF A V+A
Sbjct: 199 PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKIISGRGEKTSIGFSAAVKA------- 250
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
D + ++ DL+ +GLIPEFIGR P++ +L L+ LVQ+L +PKNAL +QY
Sbjct: 251 PDERRVGEIFRDLEPEDLIKFGLIPEFIGRLPVIATLEDLDICALVQILSQPKNALVKQY 310
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP 445
+++F M NV+L F +DALR+IAKKA+ + TGARGLR+++E IL MFE+P
Sbjct: 311 QRLFEMENVQLVFHEDALRVIAKKAIERKTGARGLRSIMERILLNTMFELP 361
>gi|77463764|ref|YP_353268.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodobacter
sphaeroides 2.4.1]
gi|123591634|sp|Q3J1G7.1|CLPX_RHOS4 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|77388182|gb|ABA79367.1| ATP-dependent protease Clp, ATPase subunit [Rhodobacter sphaeroides
2.4.1]
Length = 421
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 190/375 (50%), Positives = 254/375 (67%), Gaps = 54/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EICK LD++VIGQ AK+ AV+NHYKR+ HSS
Sbjct: 63 VPTPREICKVLDDYVIGQMHAKRV---------------LSVAVHNHYKRLNHSS----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ D +EL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ----------------------KTD--IELSKSNILLIGPTGCGKTLLAQTLARILDVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A++++VE QRGIVYIDEVDKI K+++ + R
Sbjct: 139 TMADATTLTEAGYVGEDVENIILKLLQASEYNVERVQRGIVYIDEVDKITRKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 199 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
++R + S IGFGA V+ DA L + ++ DL +GLIPEF+GR P++ +
Sbjct: 257 AQRGKGSGIGFGAEVKD-------PDARGVGELFKELEPEDLPKFGLIPEFVGRLPVIAT 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L+E LV +L EPKNAL +QY+++F + VKL FT DAL IAK+A+ + TGARGLR
Sbjct: 310 LTDLDEAALVTILTEPKNALVKQYQRLFEIEGVKLTFTADALTAIAKRAIKRKTGARGLR 369
Query: 431 ALLENILTEAMFEIP 445
+++E+IL + MFE+P
Sbjct: 370 SIMEDILLDTMFELP 384
>gi|331270304|ref|YP_004396796.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
botulinum BKT015925]
gi|329126854|gb|AEB76799.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum BKT015925]
Length = 431
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 194/394 (49%), Positives = 263/394 (66%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKRI
Sbjct: 60 LPKPSEIKTYLDDYVIGQDSAKKA---------------LAVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N +V+ D+ VEL+KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 96 ------------------NSDVDIDD-VELQKSNILLLGPTGSGKTLLAQTLARLLNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ AD+DVE A+RGI+YIDE+DKI K+E+ + R
Sbjct: 137 AIADATTLTEAGYVGEDVENILLKLIQNADYDVEKAERGIIYIDEIDKIARKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV +VP P G RKHP + I I+T +ILFICGGAF GL+K I
Sbjct: 197 DVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQINTSNILFICGGAFDGLDKII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + SS+GFG+ V++ LL++ DL+ +GLIPEFIGR PI+V+
Sbjct: 255 EKRTRKSSLGFGSEVKSKEEKD-------IGELLKASVPEDLLKFGLIPEFIGRLPIMVT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L +LN + LV++L EPKNAL +QYKK+ M+NV+L F ++AL+ IA +A+++ TGARGLR
Sbjct: 308 LQSLNNNALVRILKEPKNALVKQYKKLLLMDNVELEFEEEALKAIADEAISRKTGARGLR 367
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E + + MF+IP + V+++K+ +
Sbjct: 368 SIIEETMRDIMFDIP----SKYDIKKVIINKDTI 397
>gi|386815715|ref|ZP_10102933.1| ATP-dependent Clp protease ATP-binding subunit clpX [Thiothrix
nivea DSM 5205]
gi|386420291|gb|EIJ34126.1| ATP-dependent Clp protease ATP-binding subunit clpX [Thiothrix
nivea DSM 5205]
Length = 426
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 194/408 (47%), Positives = 261/408 (63%), Gaps = 56/408 (13%)
Query: 64 RNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIY 123
+ S+ LPTP E+ LDE+VIGQE AK+ AVYNHYKR+Y
Sbjct: 58 QGSDEQSSLPTPHELKANLDEYVIGQELAKRV---------------LSVAVYNHYKRLY 102
Query: 124 HSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTL 183
K G + VEL KSN+LL+GPTGSGKTLLA+TL
Sbjct: 103 K----------------------KGGKDD------VELAKSNILLIGPTGSGKTLLAETL 134
Query: 184 ARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-K 242
AR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K
Sbjct: 135 ARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQTGIVYIDEIDKISRK 194
Query: 243 AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGA 302
A++ + RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT++ILFI GGA
Sbjct: 195 ADNPSITRDVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTRNILFIVGGA 252
Query: 303 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFI 362
F G+++ I R + SIGF A V+A + + ++ +++ DLV YGLIPEF+
Sbjct: 253 FAGMDRVIRRRTEKGSIGFSAKVKAPDESRSFGE------VIRDIEAEDLVHYGLIPEFV 306
Query: 363 GRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAK 422
GR P++ +L L+E+ LVQ+L EP+NAL +QY K+F M +L F DDAL IA+KAM +
Sbjct: 307 GRLPVVATLEELDEEALVQILTEPRNALTKQYAKLFDMEGAELVFRDDALHAIARKAMER 366
Query: 423 NTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
TGARGLR+++E IL + M+++P + +V V+VD+ V P
Sbjct: 367 KTGARGLRSIMEKILLDTMYDLPSEQ----NVGKVVVDESVVKGESTP 410
>gi|343503059|ref|ZP_08740894.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio tubiashii
ATCC 19109]
gi|418480505|ref|ZP_13049563.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio tubiashii
NCIMB 1337 = ATCC 19106]
gi|342812729|gb|EGU47721.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio tubiashii
ATCC 19109]
gi|384571897|gb|EIF02425.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio tubiashii
NCIMB 1337 = ATCC 19106]
Length = 427
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 258/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P+EI + LD++VIGQ+ AKK AVYNHYKR+
Sbjct: 65 LPVPREIREHLDDYVIGQDYAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 ---------------RNGDTTSEG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA +R+ T + + L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVATGTGIGFGADIRSKDETRTIGE------LFSQVEPEDLVKYGLIPEFIGRLPVTT 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+ED L+Q+L EPKNAL +QY +F + + +L F +DALR IAKKAM + TGARGL
Sbjct: 315 TLTELDEDALIQILCEPKNALTKQYAALFELEDSELEFREDALRAIAKKAMERKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P V+ V++D+ + P
Sbjct: 375 RSILEGVLLETMYELP----SMDDVSKVVIDESVIKGESDP 411
>gi|407776939|ref|ZP_11124210.1| ATP-dependent protease ATP-binding subunit ClpX [Nitratireductor
pacificus pht-3B]
gi|407301104|gb|EKF20225.1| ATP-dependent protease ATP-binding subunit ClpX [Nitratireductor
pacificus pht-3B]
Length = 424
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 196/400 (49%), Positives = 262/400 (65%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI LD++VIGQ AK+ AV+NHYKR+ H+S
Sbjct: 65 VPTPQEILAVLDDYVIGQPYAKRV---------------LSVAVHNHYKRLAHAS----- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KS + VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 105 ---------------KSAD--------VELAKSNILLIGPTGCGKTLLAQTLARIIDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 202 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTANILFICGGAFAGLDKII 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S+R + +SIGF A V + + T L V+ DL+ +GLIPEF+GR PIL +
Sbjct: 260 SDRGRKTSIGFAANVAS-------PEDRQTGELFRQVEPEDLLKFGLIPEFVGRLPILAT 312
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E LVQ+L EPKNAL +QY+++F M NV+L F ++AL IA+KA+ + TGARGLR
Sbjct: 313 LEDLDEPALVQILTEPKNALVKQYQRLFDMENVELTFHENALAAIARKAIERKTGARGLR 372
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+++E+IL + MFE+P V V++ E V P
Sbjct: 373 SIMESILLDTMFELP----ALEGVQEVVISDEVVAGNARP 408
>gi|291533786|emb|CBL06899.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Megamonas
hypermegale ART12/1]
Length = 407
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 194/385 (50%), Positives = 259/385 (67%), Gaps = 55/385 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LP P+EI L+++VIGQ+ AKKS AVYNHYKRI + Q +
Sbjct: 62 ELPKPREIYDVLNQYVIGQDEAKKS---------------LSVAVYNHYKRINRVTKQDD 106
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
VEL+KSN+L++GPTGSGKTLLA+TLA+I+NVP
Sbjct: 107 ----------------------------VELQKSNILMLGPTGSGKTLLAQTLAKILNVP 138
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD D+E AQ+GI+YIDE+DKI K+E+ +
Sbjct: 139 FAIADATSLTEAGYVGEDVENILLKLIQAADNDIEQAQKGIIYIDEIDKIARKSENPSIT 198
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN-IPIDTKDILFICGGAFVGLEK 308
RDVSGEGVQQALLK+LEGT+ +VP P G RKHP + + IDT +ILFICGGAF G+EK
Sbjct: 199 RDVSGEGVQQALLKILEGTIASVP-PQGG-RKHPHQEGMLQIDTTNILFICGGAFDGIEK 256
Query: 309 TISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I R S+GFGA +++ + T +L++V DL+ GLIPEFIGR P++
Sbjct: 257 IIDARLGKKSLGFGADIKSKRKQ-------TTGEILKNVLPEDLLKCGLIPEFIGRVPVV 309
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
V+L +L ED LV +L++PKNAL +QY K+ M+ VKLHF ++AL LIAK+A+ + TGARG
Sbjct: 310 VTLESLTEDALVDILVKPKNALVKQYGKLLEMDGVKLHFDEEALHLIAKEALERKTGARG 369
Query: 429 LRALLENILTEAMFEIPETKIGTSS 453
LR+++E I+ + MFEIP +K+G S
Sbjct: 370 LRSIIERIMRDVMFEIP-SKMGAVS 393
>gi|442319290|ref|YP_007359311.1| ATP-dependent protease ATP-binding subunit ClpX [Myxococcus
stipitatus DSM 14675]
gi|441486932|gb|AGC43627.1| ATP-dependent protease ATP-binding subunit ClpX [Myxococcus
stipitatus DSM 14675]
Length = 427
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 197/414 (47%), Positives = 265/414 (64%), Gaps = 57/414 (13%)
Query: 58 ENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYN 117
E +R + + +P P EI LDE+VIGQERAKK+ AV+N
Sbjct: 51 EEIDREETKDTKLRIPRPSEIKAVLDEYVIGQERAKKT---------------LSVAVHN 95
Query: 118 HYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKT 177
HYKRI +E+ VEL+KSN+LL+GPTGSGKT
Sbjct: 96 HYKRI-------------------------ESKVALED---VELQKSNILLLGPTGSGKT 127
Query: 178 LLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEV 237
LLA+TLARI+NVPFTI DAT LT+AGYVGED E+++ LL AAD D+E AQRGIVYIDE+
Sbjct: 128 LLAQTLARILNVPFTIADATCLTEAGYVGEDVENIIVNLLQAADHDIERAQRGIVYIDEI 187
Query: 238 DKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDIL 296
DKI K+E+ + RDVSGEGVQQALLK++EGTV NV P G RKHP+ + + +DT +IL
Sbjct: 188 DKIARKSENPSITRDVSGEGVQQALLKIIEGTVANV--PPKGGRKHPQQEFLQVDTTNIL 245
Query: 297 FICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYG 356
FICGGAF GL++ I R S+GFGA +++ + LT+ LL+ V+ DL+ +G
Sbjct: 246 FICGGAFGGLDQVIERRLGGRSLGFGADIQSK-KQRNLTE------LLKHVEPEDLLKFG 298
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
+IPEFIGR PI+ +L L+E L+ +L +PKNAL +QY+K+F ++ V L FTD AL+ IA
Sbjct: 299 MIPEFIGRLPIITALEELDEPALINILNQPKNALTKQYRKLFELDGVALKFTDGALKAIA 358
Query: 417 KKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+A+ + GARGLR++LE+ + + M+EIP K +V VL+ +E + P
Sbjct: 359 SEAIRRKAGARGLRSILESAMLDVMYEIPSRK----TVREVLISEEVILKKSEP 408
>gi|319407113|emb|CBI80750.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Bartonella
sp. 1-1C]
Length = 424
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 197/411 (47%), Positives = 264/411 (64%), Gaps = 68/411 (16%)
Query: 36 EIMGGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKS 95
E+ IR++ +S+GI++ +PTP+EI LD++VIGQ AK+
Sbjct: 44 ELCMDIIREENKSSGIKARD---------------GVPTPQEILTVLDDYVIGQRHAKRV 88
Query: 96 HIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEN 155
AV+NHYKR+ H S KS +
Sbjct: 89 ---------------LSVAVHNHYKRLAHQS--------------------KSSD----- 108
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
VEL KSN+LL+GPTG GKT LA+TLARI++VPFT+ DAT LT+AGYVGED E+++ K
Sbjct: 109 ---VELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILK 165
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
LL +AD++VE AQRGIVYIDEVDKI KA++ + RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQSADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVP- 224
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
P G RKHP+ + + +DT +ILFICGGAF GLEK IS R + +SIGF A V+A
Sbjct: 225 PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKIISGRGEKTSIGFSAAVKA------- 276
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
D + ++ DL+ +GLIPEFIGR P++ +L L+ LVQ+L +PKNAL +QY
Sbjct: 277 PDERRVGEIFRDLEPEDLIKFGLIPEFIGRLPVIATLEDLDICALVQILSQPKNALVKQY 336
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP 445
+++F M NV+L F +DALR+IAKKA+ + TGARGLR+++E IL MFE+P
Sbjct: 337 QRLFEMENVQLVFHEDALRVIAKKAIERKTGARGLRSIMERILLNTMFELP 387
>gi|359437262|ref|ZP_09227332.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas sp. BSi20311]
gi|359446706|ref|ZP_09236357.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas sp. BSi20439]
gi|358028086|dbj|GAA63581.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas sp. BSi20311]
gi|358039512|dbj|GAA72606.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas sp. BSi20439]
Length = 427
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 261/401 (65%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQ+ AKK AVYNHYKR+ + S +++
Sbjct: 67 LPVPKEIRNHLDDYVIGQDHAKKV---------------LSVAVYNHYKRLRNQSTKQD- 110
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 111 ---------------------------VELGKSNILLIGPTGSGKTLLAETLARLLDVPF 143
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 144 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 203
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 204 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 261
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R +++ IGFG V+ + + L S + V+ DLV YGLIPEFIGR P++
Sbjct: 262 EQRSHKNTGIGFGVNVKESAASRSL------SETFKDVEPEDLVKYGLIPEFIGRLPVVA 315
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E LVQ+L EPKNA+ +Q+ +F M +V+L F DDALR IA KAM + TGARGL
Sbjct: 316 TLTELDEAALVQILSEPKNAITKQFSVLFGMEDVELEFRDDALRAIAHKAMERKTGARGL 375
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E +L + M+E+P +V+ V+VD+ + P
Sbjct: 376 RSIVEGVLLDTMYELP----SIDNVSKVVVDETVIKGESDP 412
>gi|315127188|ref|YP_004069191.1| ATP-dependent protease ATP-binding subunit [Pseudoalteromonas sp.
SM9913]
gi|315015702|gb|ADT69040.1| ATP-dependent protease ATP-binding subunit [Pseudoalteromonas sp.
SM9913]
Length = 427
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 261/401 (65%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQ+ AKK AVYNHYKR+ + S +++
Sbjct: 67 LPVPKEIRNHLDDYVIGQDHAKKV---------------LSVAVYNHYKRLRNQSTKQD- 110
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 111 ---------------------------VELGKSNILLIGPTGSGKTLLAETLARLLDVPF 143
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 144 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 203
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 204 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 261
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R +++ IGFG V+ + + L S + V+ DLV YGLIPEFIGR P++
Sbjct: 262 EQRSHKNTGIGFGVDVKESAASRSL------SETFKDVEPEDLVKYGLIPEFIGRLPVVA 315
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E LVQ+L EPKNA+ +Q+ +F M +V+L F DDALR IA KAM + TGARGL
Sbjct: 316 TLTELDEAALVQILSEPKNAITKQFSVLFGMEDVELEFRDDALRAIAHKAMERKTGARGL 375
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E +L + M+E+P +V+ V+VD+ + P
Sbjct: 376 RSIVEGVLLDTMYELP----SIDNVSKVVVDETVIKGESDP 412
>gi|126659495|ref|ZP_01730628.1| ATP-dependent protease ATP-binding subunit [Cyanothece sp. CCY0110]
gi|126619229|gb|EAZ89965.1| ATP-dependent protease ATP-binding subunit [Cyanothece sp. CCY0110]
Length = 391
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 197/421 (46%), Positives = 268/421 (63%), Gaps = 54/421 (12%)
Query: 46 GESNGIESESETENGNR-NRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDM 104
G S I +S T R ++N +LP P EI LDE+VIGQ+ AKK
Sbjct: 2 GTSGPITDKSNTRTKARPSKNGTSLKELPKPMEIKDYLDEYVIGQDEAKKV--------- 52
Query: 105 LVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKS 164
AVYNHYKR+ + V+ N +D+ +EL+KS
Sbjct: 53 ------LSVAVYNHYKRL---------------------NLVQGKN----DDDNIELQKS 81
Query: 165 NVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDV 224
N+LLMGPTGSGKTLLA+TLA+++ VPF + DAT LT+AGYVGED E++L +LL AD DV
Sbjct: 82 NILLMGPTGSGKTLLAQTLAQVLEVPFAVADATTLTEAGYVGEDVENILLRLLQVADLDV 141
Query: 225 EAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHP 283
E AQRGI+YIDE+DKI K+E+ + RDVSGEGVQQALLKMLEGTV NVP P G RKHP
Sbjct: 142 EEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVP-PQGG-RKHP 199
Query: 284 RGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSL 343
D I IDT +ILFICGGAFVGLE+ I +R S+GF P G + T+ L
Sbjct: 200 YQDCIQIDTSNILFICGGAFVGLERVIEQRIGKKSMGFVRP------GEGQSKEKRTADL 253
Query: 344 LESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNV 403
++ V+ DLV +G+IPEF+GR P++ +L+ L E+ LV +L P+NAL +QY+K+ +M+NV
Sbjct: 254 MQRVEPDDLVKFGMIPEFVGRIPVMAALNPLTEETLVAILTRPRNALVKQYQKLLNMDNV 313
Query: 404 KLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEA 463
+L F+++A++ IA++A + TGAR LR ++E ++ + M+E+P + V ++ KE
Sbjct: 314 ELEFSEEAVKAIAQEAYRRKTGARALRGIVEELMLDVMYELPSRQ----DVQKCMITKEM 369
Query: 464 V 464
V
Sbjct: 370 V 370
>gi|442611656|ref|ZP_21026362.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
gi|441747584|emb|CCQ12424.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
Length = 427
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 256/401 (63%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTPKEI LD++VIGQ+ AKK AVYNHYKR+
Sbjct: 67 LPTPKEIRNHLDDYVIGQDHAKKV---------------LAVAVYNHYKRLR-------- 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N E VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 104 --------------------NQETKADVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 143
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 144 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 203
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 204 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 261
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R +++ IGFGA V+ LT+A + V+ DLV YGLIPEFIGR P++
Sbjct: 262 EQRSHKNTGIGFGAQVKGADSKQTLTEA------FQQVEPEDLVKYGLIPEFIGRLPVVA 315
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E L+Q+L EPKNAL +Q+ +F M V L F +DAL+ IA KAM + TGARGL
Sbjct: 316 TLTELDESALIQILSEPKNALTKQFAALFKMEGVDLEFREDALKAIAHKAMVRKTGARGL 375
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E IL M+E+P + V V++D+ + P
Sbjct: 376 RSIVEGILLNTMYELPSME----EVAKVVIDETVIKGESDP 412
>gi|114569889|ref|YP_756569.1| ATP-dependent protease ATP-binding subunit ClpX [Maricaulis maris
MCS10]
gi|122316140|sp|Q0AQ06.1|CLPX_MARMM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|114340351|gb|ABI65631.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Maricaulis
maris MCS10]
Length = 423
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 194/394 (49%), Positives = 261/394 (66%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P+P+EI L+++VIGQ AK+ AV+NHYKR+ H+S +
Sbjct: 65 VPSPQEIFNVLNDYVIGQAHAKRV---------------LAVAVHNHYKRLNHASQNSD- 108
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 109 ---------------------------VELAKSNILLIGPTGCGKTLLAQTLARILDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIVLKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILF+ GGAF GL+K I
Sbjct: 202 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFVVGGAFAGLDKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S+R Q SSIGFGA VR DA T +L V+ DL+ +GLIPEF+GR P++ +
Sbjct: 260 SQRGQGSSIGFGADVRE-------PDARRTGEILREVEPDDLLRFGLIPEFVGRLPVIAT 312
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ LVQ+L EPKNAL +QY+++F M V L FT+DAL+ IA +A+A+ TGARGLR
Sbjct: 313 LEDLDIGALVQILTEPKNALVKQYQRLFEMEGVGLTFTEDALKAIANRAIARKTGARGLR 372
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E IL E MF++P + V ++V+ E V
Sbjct: 373 SIMEGILLETMFDLPSLE----GVEEIVVNGEVV 402
>gi|238751007|ref|ZP_04612503.1| ATP-dependent Clp protease ATP-binding subunit clpX [Yersinia
rohdei ATCC 43380]
gi|238783608|ref|ZP_04627629.1| ATP-dependent Clp protease ATP-binding subunit clpX [Yersinia
bercovieri ATCC 43970]
gi|238795541|ref|ZP_04639056.1| ATP-dependent Clp protease ATP-binding subunit clpX [Yersinia
mollaretii ATCC 43969]
gi|238710697|gb|EEQ02919.1| ATP-dependent Clp protease ATP-binding subunit clpX [Yersinia
rohdei ATCC 43380]
gi|238715486|gb|EEQ07477.1| ATP-dependent Clp protease ATP-binding subunit clpX [Yersinia
bercovieri ATCC 43970]
gi|238720660|gb|EEQ12461.1| ATP-dependent Clp protease ATP-binding subunit clpX [Yersinia
mollaretii ATCC 43969]
Length = 423
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 197/412 (47%), Positives = 262/412 (63%), Gaps = 62/412 (15%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
+R R+S LPTP EI + LD++VIGQE AKK AVYNHYK
Sbjct: 58 HRERSS-----LPTPHEIRRHLDDYVIGQEPAKKV---------------LAVAVYNHYK 97
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
R+ N + +EL KSN+LL+GPTGSGKTLLA
Sbjct: 98 RLR----------------------------NGDTSNGIELGKSNILLIGPTGSGKTLLA 129
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+TLAR ++VPFT+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI
Sbjct: 130 ETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKI 189
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K+++ + RDVSGEGVQQALLK++EGT+ VP P G RKHP+ + + +DT ILFIC
Sbjct: 190 SRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQVDTSKILFIC 247
Query: 300 GGAFVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLI 358
GGAF GL+K I +R + IGFGA V+ G ++ LL + DL+ +GLI
Sbjct: 248 GGAFAGLDKVIGQRINTGTGIGFGATVK------GKSEKATEGELLSQAEPEDLIKFGLI 301
Query: 359 PEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKK 418
PEFIGR P++ +LS L+ED L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKK
Sbjct: 302 PEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFNLEGVELEFRDEALTAIAKK 361
Query: 419 AMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
AMA+ TGARGLR+++E L + M+++P SV V+VD+ + AP
Sbjct: 362 AMARKTGARGLRSIVEGALLDTMYDLP----SMDSVEKVVVDESVIAGQSAP 409
>gi|422010032|ref|ZP_16357014.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
rettgeri Dmel1]
gi|414092205|gb|EKT53884.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
rettgeri Dmel1]
Length = 425
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 196/402 (48%), Positives = 259/402 (64%), Gaps = 56/402 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTP EI + LD++VIGQE+AKK AVYNHYKR+ +
Sbjct: 63 ELPTPHEIRQHLDDYVIGQEKAKKV---------------LAVAVYNHYKRLRN------ 101
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
G G VEL KSN+LL+GPTGSGKTLLA+TLAR ++VP
Sbjct: 102 ------------GDKTSDG---------VELGKSNILLIGPTGSGKTLLAETLARYLDVP 140
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
FT+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ +
Sbjct: 141 FTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSIT 200
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K
Sbjct: 201 RDVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKV 258
Query: 310 ISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I +R S IGF A V+ G +D LL + DL+ +GLIPEFIGR P++
Sbjct: 259 IGQRLNTRSGIGFAAEVK------GESDKATEGELLTQAEPEDLIKFGLIPEFIGRLPVV 312
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L+ L+E+ L+Q+L EPKNAL +QY+ +FS+ N +L F ++AL+ IAKKAMA+ TGARG
Sbjct: 313 ATLTELSEEALIQILKEPKNALTKQYQALFSLENTELEFREEALKAIAKKAMARKTGARG 372
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E L M+++P S+V V+VD+ + P
Sbjct: 373 LRSIVEAALLNTMYDLP----SMSNVEKVVVDENVINEQSEP 410
>gi|163751870|ref|ZP_02159084.1| ATP-dependent protease ATP-binding subunit [Shewanella benthica
KT99]
gi|161328220|gb|EDP99384.1| ATP-dependent protease ATP-binding subunit [Shewanella benthica
KT99]
Length = 425
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 262/401 (65%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP E+ LD++VIGQ++AKK AVYNHYKR+ +
Sbjct: 65 LPTPHELRAHLDDYVIGQDKAKKV---------------LSVAVYNHYKRLKN------- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
S+H K G VEL KSN+LL+GPTGSGKTLLA+T AR ++VPF
Sbjct: 103 -SNH-----------KDG---------VELGKSNILLIGPTGSGKTLLAETFARFLDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFSGLEKVI 259
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + S IGFGA ++ G D S +L V+ DL+ YGLIPEF+GR P+L
Sbjct: 260 EQRSHKGSGIGFGAQIK------GEDDKATISEILMQVEPEDLIKYGLIPEFVGRLPVLS 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ LVQ+L EPKNAL +Q+ +F M V+L FT+DAL+ IA KAM + TGARGL
Sbjct: 314 TLTELDEEALVQILSEPKNALTKQFAALFEMEGVELEFTEDALKAIAAKAMMRKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E IL + M+++P + V V++D+ V +P
Sbjct: 374 RSIVEGILLDIMYDLP----SSDDVAKVVIDESVVKGESSP 410
>gi|312143236|ref|YP_003994682.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Halanaerobium
hydrogeniformans]
gi|311903887|gb|ADQ14328.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Halanaerobium
hydrogeniformans]
Length = 421
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 185/376 (49%), Positives = 256/376 (68%), Gaps = 52/376 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
++P PKEI + LD++VIGQERAKKS AVYNHYKR+
Sbjct: 61 EIPKPKEIKEILDQYVIGQERAKKS---------------LSVAVYNHYKRV-------- 97
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N N+ D+ VEL+KSN++++GPTG GKTL+A+TLARI++VP
Sbjct: 98 -------------------NTNMVVDD-VELQKSNIMMVGPTGCGKTLMAQTLARILDVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F ITDAT+LT+AGYVGED E++L KL+ AAD+DVE A++GI+Y+DE+DKI K+E+ +
Sbjct: 138 FAITDATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIIYVDEIDKIARKSENTSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGTV +VP P G RKHP + I IDT DILFI GGAF GLEK
Sbjct: 198 RDVSGEGVQQALLKIIEGTVASVP-PQGG-RKHPHQEFIQIDTTDILFIAGGAFDGLEKL 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R + +GFGA ++ + + +L+ + DL+ YGLIPEFIGR P+ V
Sbjct: 256 IDSRISEKVMGFGADIKTKNESKNI------GEILKHIQPQDLLHYGLIPEFIGRMPVQV 309
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L + +V+++ EP+NAL +QY+K F M++++L FTDDAL IA +A+++NTGARGL
Sbjct: 310 TLDELEVEDMVRIMQEPRNALVKQYQKFFLMDDIELEFTDDALEAIANQALSRNTGARGL 369
Query: 430 RALLENILTEAMFEIP 445
R+++EN + + M+++P
Sbjct: 370 RSVVENTVLDIMYDLP 385
>gi|187918472|ref|YP_001884035.1| ATP-dependent protease ATP-binding subunit ClpX [Borrelia hermsii
DAH]
gi|119861320|gb|AAX17115.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Borrelia
hermsii DAH]
Length = 433
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 203/410 (49%), Positives = 263/410 (64%), Gaps = 61/410 (14%)
Query: 56 ETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAV 115
+TE R R+S LPTPK++ LD+++IGQE AKK AV
Sbjct: 53 DTEKPERGRSSRS---LPTPKQLKSHLDKYIIGQEDAKKV---------------LSVAV 94
Query: 116 YNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSG 175
YNHYKRI+ G+ +SG VELEKSNVLL+GPTGSG
Sbjct: 95 YNHYKRIFR------------------GNKKESG---------VELEKSNVLLVGPTGSG 127
Query: 176 KTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYID 235
KTLLAK LA +NVPF I DAT LT+AGYVGED E++L KL+ AA+ DV A+RGIVYID
Sbjct: 128 KTLLAKKLADEMNVPFAIADATTLTEAGYVGEDVENILLKLIHAANGDVSFAERGIVYID 187
Query: 236 EVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKD 294
E+DKI K E+ + RDVSGEGVQQ+LLK++EGT+ N IP G RKHP + I I+T+D
Sbjct: 188 EIDKIAKKGENVSITRDVSGEGVQQSLLKIIEGTIAN--IPPKGGRKHPYEETIEINTQD 245
Query: 295 ILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVA 354
ILFICGGAFVGLE I R SSIGF + + + R ++ L+ ++ DLV
Sbjct: 246 ILFICGGAFVGLENIIKRRINKSSIGFSSVGKQDSR---------ENNSLKYLEMEDLVK 296
Query: 355 YGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRL 414
+GLIPEF+GR P+ L L ++ L+++L+EP+N++ +QY MF M+NV+L F DAL
Sbjct: 297 FGLIPEFVGRLPVHSYLEKLEKEDLIKILIEPENSIVKQYYHMFKMDNVELVFERDALNA 356
Query: 415 IAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
IA++AM KNTGARGLR++LE +L + MFEIP TK + V+V KE+V
Sbjct: 357 IAEEAMLKNTGARGLRSILEELLKDVMFEIPSTK----QIKKVIVTKESV 402
>gi|291528434|emb|CBK94020.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Eubacterium
rectale M104/1]
Length = 423
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 199/413 (48%), Positives = 265/413 (64%), Gaps = 59/413 (14%)
Query: 54 ESETENGNRNRNS-EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGAC 112
E E G+ +++S + +I+L TP+E+ LD++VIGQ++AKK
Sbjct: 46 EEEGVEGHEDKSSAKDDINLVTPEELKAFLDDYVIGQDQAKKV---------------LS 90
Query: 113 CAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPT 172
AVYNHYKR+ SD VEL+KSN+L++GPT
Sbjct: 91 VAVYNHYKRVLAGD-----TSD------------------------VELQKSNILMLGPT 121
Query: 173 GSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIV 232
GSGKTLLA+TLAR++NVPF I DAT LT+AGYVGED E++L KL+ AAD+D+E A+ GI+
Sbjct: 122 GSGKTLLAQTLARVINVPFAIADATTLTEAGYVGEDVENILLKLIQAADYDIERAEHGII 181
Query: 233 YIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPID 291
YIDE+DKI K+E+ + RDVSGEGVQQALLK+LEGT +VP P G RKHP+ + IPID
Sbjct: 182 YIDEIDKITKKSENVSITRDVSGEGVQQALLKILEGTEASVP-PQGG-RKHPQQELIPID 239
Query: 292 TKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGD 351
T +ILFICGGAF GLEK I R SSIGF + V++ L + D
Sbjct: 240 TTNILFICGGAFDGLEKIIDSRMDTSSIGFNSDVKSKTE-------LNVGEAFKHALPQD 292
Query: 352 LVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDA 411
V +GLIPEFIGR PI VSL AL+ D L+++L EPKN+L +QY K+F ++ V L FTDDA
Sbjct: 293 FVKFGLIPEFIGRVPITVSLEALDRDALIRILKEPKNSLIKQYTKLFELDGVGLEFTDDA 352
Query: 412 LRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+ IA KA+ + TGARGLRA++E ++ + M+ IP K S++ ++DK+ V
Sbjct: 353 VNAIADKALERKTGARGLRAIMEAVMLDLMYRIPSDK----SISKCVIDKDTV 401
>gi|87201066|ref|YP_498323.1| ATP-dependent protease ATP-binding subunit ClpX [Novosphingobium
aromaticivorans DSM 12444]
gi|123488135|sp|Q2G3T4.1|CLPX_NOVAD RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|87136747|gb|ABD27489.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Novosphingobium aromaticivorans DSM 12444]
Length = 418
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 201/428 (46%), Positives = 273/428 (63%), Gaps = 63/428 (14%)
Query: 56 ETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAV 115
ET+ G + G +PTP++I + L+++VIGQ+RAK+ AV
Sbjct: 51 ETKAGIAGKKDGG---VPTPRDIFETLNDYVIGQDRAKRV---------------LSVAV 92
Query: 116 YNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSG 175
+NHYKR+ HS K G+ VEL KSN+LL+GPTGSG
Sbjct: 93 HNHYKRLKHSG--------------------KGGD--------VELSKSNILLVGPTGSG 124
Query: 176 KTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYID 235
KTLLA+TLA+ +VPFT+ DAT LT+AGYVGED E+++ KLL A+D++VE AQ GIVYID
Sbjct: 125 KTLLAQTLAKTFDVPFTMADATTLTEAGYVGEDVENIILKLLQASDYNVEKAQHGIVYID 184
Query: 236 EVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKD 294
E+DKI KAE+ + RDVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT +
Sbjct: 185 EIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVP-PQGG-RKHPQQEFLQVDTTN 242
Query: 295 ILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVA 354
ILFICGGAF GLEK I++R Q SIGFGA V D LL+ + DL+
Sbjct: 243 ILFICGGAFAGLEKIIADRLQKRSIGFGAHVAD-------PDKRKVGELLQKAEPEDLLK 295
Query: 355 YGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRL 414
+GLIPEF+GR P++ +L+ L+ + LV++L EPKNAL +QY K+F + +V L FTDDAL
Sbjct: 296 FGLIPEFVGRLPVIATLNDLDIEALVKILKEPKNALVKQYAKLFELEDVTLTFTDDALEA 355
Query: 415 IAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGA 474
IAKKA+ + TGARGLR+++E +L + MF++P S + ++VDK+ V P
Sbjct: 356 IAKKAIERKTGARGLRSIVEGLLLDTMFDVPT----ESDIAEIVVDKDVVEGRKEP---V 408
Query: 475 KILHGDGE 482
++L G E
Sbjct: 409 RVLKGKEE 416
>gi|238788009|ref|ZP_04631805.1| ATP-dependent Clp protease ATP-binding subunit clpX [Yersinia
frederiksenii ATCC 33641]
gi|238723957|gb|EEQ15601.1| ATP-dependent Clp protease ATP-binding subunit clpX [Yersinia
frederiksenii ATCC 33641]
Length = 423
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 198/412 (48%), Positives = 261/412 (63%), Gaps = 62/412 (15%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
+R R+S LPTP EI LD++VIGQE AKK AVYNHYK
Sbjct: 58 HRERSS-----LPTPHEIRHHLDDYVIGQEPAKKV---------------LAVAVYNHYK 97
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
R+ N + +EL KSN+LL+GPTGSGKTLLA
Sbjct: 98 RLR----------------------------NGDTSNGIELGKSNILLIGPTGSGKTLLA 129
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+TLAR ++VPFT+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI
Sbjct: 130 ETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKI 189
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K+++ + RDVSGEGVQQALLK++EGT+ VP P G RKHP+ + + +DT ILFIC
Sbjct: 190 SRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQVDTSKILFIC 247
Query: 300 GGAFVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLI 358
GGAF GL+K I +R S IGFGA V+ G ++ LL + DL+ +GLI
Sbjct: 248 GGAFAGLDKVIEQRINTGSGIGFGATVK------GKSEKATEGELLRQAEPEDLIKFGLI 301
Query: 359 PEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKK 418
PEFIGR P++ +LS L+ED L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKK
Sbjct: 302 PEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFNLEGVELEFRDEALTAIAKK 361
Query: 419 AMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
AMA+ TGARGLR+++E L + M+++P SV V+VD+ + AP
Sbjct: 362 AMARKTGARGLRSIVEGALLDTMYDLP----SMDSVEKVVVDESVIAGQSAP 409
>gi|15837790|ref|NP_298478.1| ATP-dependent protease ATP-binding subunit ClpX [Xylella fastidiosa
9a5c]
gi|21263488|sp|Q9PE40.1|CLPX_XYLFA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|9106158|gb|AAF83998.1|AE003953_2 ATP-dependent Clp protease ATP binding subunit Clpx [Xylella
fastidiosa 9a5c]
Length = 426
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 200/424 (47%), Positives = 271/424 (63%), Gaps = 62/424 (14%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E R+S LP PKEI + LD++VIGQ+RAK++
Sbjct: 48 NDIIREELEEKSQSARSS-----LPKPKEILEVLDQYVIGQQRAKRT------------- 89
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKRI S H +ND+I EL KSN+LL
Sbjct: 90 --LAVAVYNHYKRIE---------SRH------------------KNDDI-ELAKSNILL 119
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ
Sbjct: 120 VGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVERAQ 179
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
GIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ +
Sbjct: 180 HGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEF 237
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQDS-SIGFGAPVRANMRTGGLTDALVTSSLLES 346
+ +DTK+ILFICGGAF GL+K I +R ++ IGFG V+++ + +L
Sbjct: 238 LQVDTKNILFICGGAFAGLDKVIQQRCTEAGGIGFGVKVKSSESKRDV------GKVLAG 291
Query: 347 VDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLH 406
V+ DL+ +GLIPEF+GR P++ +L L+E LV++L EPKNA+ +Q+KK+F M NV+L
Sbjct: 292 VEPEDLIKFGLIPEFVGRLPVVATLDELDESALVKILTEPKNAITKQFKKLFEMENVELE 351
Query: 407 FTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
F DAL +A+KA+ + TGARGLR ++E +L + M+E+P ++ V+VD+ + +
Sbjct: 352 FRQDALSAVARKALKRKTGARGLRTIVELVLLDTMYELP----SQEGISKVVVDESVIEN 407
Query: 467 VDAP 470
P
Sbjct: 408 KSEP 411
>gi|262276277|ref|ZP_06054086.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Grimontia
hollisae CIP 101886]
gi|262220085|gb|EEY71401.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Grimontia
hollisae CIP 101886]
Length = 426
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 195/402 (48%), Positives = 260/402 (64%), Gaps = 56/402 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTP+EI LD++VIGQ+RAKK AVYNHYKR+
Sbjct: 64 ELPTPQEIRAHLDDYVIGQDRAKKV---------------LSVAVYNHYKRL-------- 100
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
++G+ + VEL KSN+LL+GPTGSGKTLLA+TLAR ++VP
Sbjct: 101 ----------------RNGDTTADG---VELGKSNILLIGPTGSGKTLLAETLARFLDVP 141
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
FT+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI K+++ +
Sbjct: 142 FTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKSDNPSIT 201
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT ILFICGGAF GL+K
Sbjct: 202 RDVSGEGVQQALLKLVEGTIASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKV 259
Query: 310 ISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
+ +R + S IGFGA VR+ + L+D L V+ DLV YGLIPEFIGR P+
Sbjct: 260 VDQRVAKGSGIGFGAEVRSKDQEASLSD------LFSKVEPEDLVKYGLIPEFIGRLPVT 313
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
L L+ED LVQ+L EPKNAL +QY + ++ V+L F DDAL IAKKAM + TGARG
Sbjct: 314 AILGELDEDALVQILREPKNALTKQYAALLELDGVELEFRDDALTAIAKKAMERKTGARG 373
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E +L + M+++P +K V V++D+ + P
Sbjct: 374 LRSIVEAVLLDTMYDLPSSK----GVTKVVIDESVIKGESEP 411
>gi|212696597|ref|ZP_03304725.1| hypothetical protein ANHYDRO_01137 [Anaerococcus hydrogenalis DSM
7454]
gi|212676328|gb|EEB35935.1| hypothetical protein ANHYDRO_01137 [Anaerococcus hydrogenalis DSM
7454]
Length = 402
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 198/410 (48%), Positives = 263/410 (64%), Gaps = 62/410 (15%)
Query: 56 ETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAV 115
E EN +++N +I+L P+EI + LD++VI QE AKK+ +V
Sbjct: 45 ERENFGQSKNM--DIELAKPREIKEYLDQYVIQQEMAKKT---------------LSVSV 87
Query: 116 YNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSG 175
YNHYKRI N N + D+ VEL+KSN+L++GPTGSG
Sbjct: 88 YNHYKRI---------------------------NSNYDKDDGVELQKSNILMLGPTGSG 120
Query: 176 KTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYID 235
KTLLA+TLA+ +NVPF I DAT+LT+AGYVGED E+++ KL+ AAD+D+E AQ GI+YID
Sbjct: 121 KTLLAQTLAKKLNVPFAIADATSLTEAGYVGEDVENIILKLVQAADYDIELAQTGIIYID 180
Query: 236 EVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKD 294
E+DKI K+E+ + RDVSGEGVQQALLK++EGTV NVP P G RKHP + I +DT +
Sbjct: 181 EIDKITRKSENPSITRDVSGEGVQQALLKLIEGTVANVP-PQGG-RKHPSQEYIQVDTTN 238
Query: 295 ILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVA 354
ILFI GGAF G++ I +R SIGFG+ N L V + DL+
Sbjct: 239 ILFIVGGAFDGIKDIIKQRTNKKSIGFGSDDSENKEIS-----------LADVRTEDLLK 287
Query: 355 YGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRL 414
YGLIPEFIGR PI+VSL L+ D LV++L EPKN+L +QY+K+F ++ VKL F D+A+R
Sbjct: 288 YGLIPEFIGRVPIVVSLEDLDVDSLVKILKEPKNSLLKQYQKLFELDGVKLTFEDEAVRE 347
Query: 415 IAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
IAKKA + TGARGLR +LE++L + M+EIP + V+V K A+
Sbjct: 348 IAKKAFKQETGARGLRTILEDLLLDVMYEIP----SKDHIKEVIVSKGAI 393
>gi|337286232|ref|YP_004625705.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermodesulfatator indicus DSM 15286]
gi|335359060|gb|AEH44741.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermodesulfatator indicus DSM 15286]
Length = 415
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 194/377 (51%), Positives = 251/377 (66%), Gaps = 57/377 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P P EI LD++V+GQE+AKK IL AV+NHYKRI
Sbjct: 61 IPKPSEIKAFLDQYVVGQEKAKK-----IL----------SVAVHNHYKRIESRV----- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
S+ G VEL+KSN++L+GPTGSGKTLLA+TLA+ +NVPF
Sbjct: 101 --------SLNG---------------VELQKSNIMLIGPTGSGKTLLAQTLAKFLNVPF 137
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ LL AAD+DVE AQRGIVYIDE+DKI K +S + R
Sbjct: 138 TIADATTLTEAGYVGEDVENIILNLLQAADYDVELAQRGIVYIDEIDKIAKKTDSPSITR 197
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV NV P G RKHP+ + I +DT +ILFICGGAFVGLE+ I
Sbjct: 198 DVSGEGVQQALLKILEGTVANV--PPKGGRKHPQQEFIKVDTTNILFICGGAFVGLERII 255
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
ER SIGFGA +++ +M G +L V+ DL+ +G+IPEF+GR PI+
Sbjct: 256 KERLGQRSIGFGADIKSAKDMSIG---------EILAHVEPEDLIKFGMIPEFVGRVPIV 306
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L E +L+++L EPKNAL +QY+K+F M+ V L FT+ ALR IAK+A+ + GARG
Sbjct: 307 ATLDELTEKELIKILTEPKNALTKQYQKLFEMDGVSLRFTEGALRAIAKEAIRRKCGARG 366
Query: 429 LRALLENILTEAMFEIP 445
LRA++E + E M+E+P
Sbjct: 367 LRAIMEEAMFEIMYELP 383
>gi|260776381|ref|ZP_05885276.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
coralliilyticus ATCC BAA-450]
gi|260607604|gb|EEX33869.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
coralliilyticus ATCC BAA-450]
Length = 427
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 257/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P+EI + LD++VIGQ+ AKK AVYNHYKR+
Sbjct: 65 LPVPREIREHLDDYVIGQDYAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 ---------------RNGDTTSEG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR+ T L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVATGTGIGFGAEVRSKDETK------TVGELFTQVEPEDLVKYGLIPEFIGRLPVTT 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY +F + + +L F +DALR IAKKAM + TGARGL
Sbjct: 315 TLTELDEEALIQILCEPKNALTKQYAALFELEDSELEFREDALRAIAKKAMERKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P + V+ V++D+ + P
Sbjct: 375 RSILEGVLLETMYELP----SMNDVSKVVIDESVINGESDP 411
>gi|397687161|ref|YP_006524480.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri DSM 10701]
gi|395808717|gb|AFN78122.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri DSM 10701]
Length = 426
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 196/400 (49%), Positives = 256/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQERAKK IL AVYNHYKR+ ++E
Sbjct: 65 LPAPKEISGILDQYVIGQERAKK-----IL----------AVAVYNHYKRLNQRDKKEE- 108
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 109 ---------------------------VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFAGLEKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + ++ L V+ DLV +GLIPEF+GR P++ +
Sbjct: 260 QGRSTKGGIGFNAEVRSKDLGKKIGES------LRVVEPDDLVKFGLIPEFVGRLPVIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F + V L F DAL+ +A +A+ + TGARGLR
Sbjct: 314 LDELDEAALIQILTEPKNALTKQYAKLFELEGVDLEFRPDALKAVAGRALERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP K V+ V++D+ + P
Sbjct: 374 SILEGVLLDTMYEIPSQK----DVSKVVIDESVIEGTSQP 409
>gi|333900436|ref|YP_004474309.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
fulva 12-X]
gi|333115701|gb|AEF22215.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
fulva 12-X]
Length = 426
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 195/400 (48%), Positives = 255/400 (63%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P+EI LD++VIGQERAKK IL AVYNHYKR+
Sbjct: 65 LPAPREISAILDQYVIGQERAKK-----IL----------AVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
E + VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 ----------------------EKKDDVELGKSNILLLGPTGSGKTLLAETLARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF G+EK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFAGIEKVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR + ++ L ++ DLV +GLIPEF+GR P++ +
Sbjct: 260 QGRSTKGGIGFNAEVRTKDVEKKIGES------LREIEPDDLVKFGLIPEFVGRLPVIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E LVQ+L EPKNAL +QY K+F M V L F DAL+ +A+KA+ + TGARGLR
Sbjct: 314 LEELDEAALVQILTEPKNALTKQYGKLFEMEGVDLEFRPDALKAVAQKALERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M++IP S V+ V++D+ + P
Sbjct: 374 SILEGVLLDTMYDIP----SQSDVSKVVIDESVIDGSSKP 409
>gi|333922903|ref|YP_004496483.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Desulfotomaculum carboxydivorans CO-1-SRB]
gi|333748464|gb|AEF93571.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 416
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 192/395 (48%), Positives = 258/395 (65%), Gaps = 57/395 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLP PKEI LD++VIGQE AKK AVYNHYKRI
Sbjct: 57 DLPKPKEIKAILDQYVIGQESAKKQ---------------LAVAVYNHYKRIN------- 94
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
LG V E VEL KSN++++GPTGSGKTLLA+TLAR++NVP
Sbjct: 95 -----------LGGKV----------EDVELSKSNIIMLGPTGSGKTLLAQTLARLLNVP 133
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A++GIVYIDE+DKI K+E+ +
Sbjct: 134 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSIT 193
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ +VP P G RKHP + I +DT +ILFICGGAF G+EK
Sbjct: 194 RDVSGEGVQQALLKILEGTIASVP-PQGG-RKHPHQEFIQLDTTNILFICGGAFDGIEKI 251
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R ++GFGA +++ +L + DL+ +GLIPEF+GR P++V
Sbjct: 252 IQNRTGKKTMGFGAEIQSKREQK-------IGEILAQILPEDLLKFGLIPEFVGRLPVIV 304
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+ED LV++L EPKNAL +QY+K+F ++ V L DALR +AK+A+ + TGARGL
Sbjct: 305 TLDALDEDALVRILTEPKNALTKQYEKLFELDGVSLEIQPDALREVAKEALKRKTGARGL 364
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
RA++E ++ M++IP ++ V++ ++A+
Sbjct: 365 RAIMEEVMLNIMYDIP----SREDISKVVITRDAI 395
>gi|268592035|ref|ZP_06126256.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Providencia
rettgeri DSM 1131]
gi|291312427|gb|EFE52880.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Providencia
rettgeri DSM 1131]
Length = 425
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 195/402 (48%), Positives = 258/402 (64%), Gaps = 56/402 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTP EI + LD++VIGQE+AKK AVYNHYKR+ +
Sbjct: 63 ELPTPHEIRQHLDDYVIGQEKAKKV---------------LAVAVYNHYKRLRN------ 101
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
G G VEL KSN+LL+GPTGSGKTLLA+TLAR ++VP
Sbjct: 102 ------------GDKTSDG---------VELGKSNILLIGPTGSGKTLLAETLARYLDVP 140
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
FT+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ +
Sbjct: 141 FTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSIT 200
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGT+ VP P G RKHP+ + + +DT ILFICGGAF GL+K
Sbjct: 201 RDVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKV 258
Query: 310 ISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I +R S IGF A V+ G +D LL + DL+ +GLIPEFIGR P++
Sbjct: 259 IGQRLNTRSGIGFAAEVK------GESDKATEGELLTQAEPEDLIKFGLIPEFIGRLPVV 312
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L+ L+E+ L+Q+L EPKNAL +QY+ +FS+ N +L F ++AL+ IAKKAMA+ TGARG
Sbjct: 313 ATLTELSEEALIQILQEPKNALTKQYQALFSLENTELEFREEALKAIAKKAMARKTGARG 372
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E L M+++P S V V+VD+ + P
Sbjct: 373 LRSIVEAALLNTMYDLP----SMSDVEKVVVDENVINEQSEP 410
>gi|319405543|emb|CBI79162.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Bartonella
sp. AR 15-3]
Length = 424
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 198/411 (48%), Positives = 266/411 (64%), Gaps = 68/411 (16%)
Query: 36 EIMGGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKS 95
E+ IR++ +S+GI++ +PTP+EI LD++VIGQ AK+
Sbjct: 44 ELCMDIIREENKSSGIKARD---------------GVPTPQEILTVLDDYVIGQRHAKRV 88
Query: 96 HIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEN 155
AV+NHYKR+ H S KS N
Sbjct: 89 ---------------LSVAVHNHYKRLAHQS--------------------KS------N 107
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
D VEL KSN+LL+GPTG GKT LA+TLARI++VPFT+ DAT LT+AGYVGED E+++ K
Sbjct: 108 D--VELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILK 165
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
LL +AD++VE AQRGIVYIDEVDKI KA++ + RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQSADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVP- 224
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
P G RKHP+ + + +DT +ILFICGGAF GLE+ IS R + +SIGF A V+A
Sbjct: 225 PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSAAVKA------- 276
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
D + ++ DL+ +GLIPEFIGR P++ +L L+ LVQ+L +PKNAL +QY
Sbjct: 277 PDERRVGEIFRDLEPEDLIKFGLIPEFIGRLPVIATLEDLDICALVQILSQPKNALVKQY 336
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP 445
+++F M NV+L F +DALR+IAKKA+ + TGARGLR+++E IL + MFE+P
Sbjct: 337 QRLFEMENVQLVFHEDALRVIAKKAIERKTGARGLRSIMERILLDTMFELP 387
>gi|425435288|ref|ZP_18815745.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9432]
gi|425452212|ref|ZP_18832030.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 7941]
gi|425458444|ref|ZP_18837932.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9808]
gi|389680217|emb|CCH91097.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9432]
gi|389766109|emb|CCI08184.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 7941]
gi|389822690|emb|CCI29605.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9808]
Length = 444
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 195/411 (47%), Positives = 262/411 (63%), Gaps = 50/411 (12%)
Query: 58 ENGNRNRNSEGNI---DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCA 114
E N+ R+ + +P P+EI K LD++VIGQ AKK A
Sbjct: 59 ERPNKRRSGQNKTTWEQIPKPREIKKHLDDYVIGQNEAKKV---------------LSVA 103
Query: 115 VYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGS 174
VYNHYKR+ QK +G + E+ +EL+KSN+LL+GPTGS
Sbjct: 104 VYNHYKRLKDIQTQK------------------AGGGSPEDS--IELQKSNILLIGPTGS 143
Query: 175 GKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYI 234
GKTLLA+TLA+I++VPF + DAT LT+AGYVGED E++L +LL AD DVE AQRGI+YI
Sbjct: 144 GKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGIIYI 203
Query: 235 DEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTK 293
DE+DKI K+E+ + RDVSGEGVQQALLKMLEGT+ NVP P G RKHP D I IDT
Sbjct: 204 DEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVP-PQGG-RKHPYQDCIQIDTS 261
Query: 294 DILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLV 353
+ILFICGGAFVGL+K I +R S+GF P G + V + LL+ + DLV
Sbjct: 262 NILFICGGAFVGLDKVIDQRLGKKSMGFIQP-----GDGQASKDKVAAGLLKQMTPDDLV 316
Query: 354 AYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALR 413
+G+IPEF+GR P+L +LS L+E+ L+ +L +P+NAL +QY+K+ M+NV+L F DA+
Sbjct: 317 KFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNALVKQYQKLLKMDNVQLEFKSDAVL 376
Query: 414 LIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
IA++A + TGAR LR ++E ++ + M+E+P K V L+ +E V
Sbjct: 377 AIAQEAYRRKTGARALRGIVEELMLDVMYELPSRK----DVKRCLITREMV 423
>gi|153820475|ref|ZP_01973142.1| ATP-dependent Clp protease, ATP-binding subunit ClpX, partial
[Vibrio cholerae NCTC 8457]
gi|126508982|gb|EAZ71576.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae NCTC 8457]
Length = 366
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 196/399 (49%), Positives = 258/399 (64%), Gaps = 56/399 (14%)
Query: 74 TPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVS 133
TP++I + LD++VIGQE AKK AVYNHYKR+
Sbjct: 7 TPRKIREHLDDYVIGQEHAKKV---------------LAVAVYNHYKRL----------- 40
Query: 134 DHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTI 193
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPFT+
Sbjct: 41 -------------RNGDTTSEG---VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTM 84
Query: 194 TDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDV 252
DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI K+E+ + RDV
Sbjct: 85 ADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKSENPSITRDV 144
Query: 253 SGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISE 312
SGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I +
Sbjct: 145 SGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQ 202
Query: 313 R-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSL 371
R + IGFGA VR+ + L S L V+ DLV YGLIPEFIGR P+ +L
Sbjct: 203 RVATGTGIGFGADVRSKDNSKTL------SELFTQVEPEDLVKYGLIPEFIGRLPVTATL 256
Query: 372 SALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRA 431
+ L+E L+Q+L EPKNAL +QY +F + NV L F +DAL+ IA KAM + TGARGLR+
Sbjct: 257 TELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAIAAKAMKRKTGARGLRS 316
Query: 432 LLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+LE +L E M+E+P + V+ V++D+ + AP
Sbjct: 317 ILEAVLLETMYELPSME----EVSKVVIDESVINGESAP 351
>gi|258621303|ref|ZP_05716337.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio mimicus
VM573]
gi|424807154|ref|ZP_18232562.1| ATP-dependent protease ATP-binding subunit [Vibrio mimicus SX-4]
gi|258586691|gb|EEW11406.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio mimicus
VM573]
gi|342325096|gb|EGU20876.1| ATP-dependent protease ATP-binding subunit [Vibrio mimicus SX-4]
Length = 426
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 201/402 (50%), Positives = 260/402 (64%), Gaps = 58/402 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP++I + LD++VIGQE AKK AVYNHYKR
Sbjct: 65 LPTPRKIREHLDDYVIGQEHAKKV---------------LAVAVYNHYKR---------- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
L +G +G+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 100 ----------LRNGDTTGDG-------VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI K+E+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKSENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SERR--QDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
ERR + IGFGA VR+ + L S L V+ DLV YGLIPEFIGR P+
Sbjct: 261 -ERRVATGTGIGFGADVRSKDNSKTL------SELFTQVEPEDLVKYGLIPEFIGRLPVT 313
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L+ L+E L+Q+L EPKNAL +QY +F + NV L F +DAL+ IA KAM + TGARG
Sbjct: 314 ATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAIAAKAMKRKTGARG 373
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE +L E M+E+P + V+ V++D+ + AP
Sbjct: 374 LRSILEAVLLETMYELPSME----EVSKVVIDESVINGESAP 411
>gi|338707313|ref|YP_004661514.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Zymomonas
mobilis subsp. pomaceae ATCC 29192]
gi|336294117|gb|AEI37224.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Zymomonas
mobilis subsp. pomaceae ATCC 29192]
Length = 422
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 191/399 (47%), Positives = 263/399 (65%), Gaps = 59/399 (14%)
Query: 65 NSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYH 124
S+G++ PTP+EIC LD++VIGQ +AK+ AV+NHYKR+ H
Sbjct: 58 KSDGSV--PTPQEICTILDQYVIGQNKAKRV---------------LSVAVHNHYKRLNH 100
Query: 125 SSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLA 184
D VEL KSN+LL+GPTG GKTLLA+TLA
Sbjct: 101 GG----------------------------KDADVELAKSNILLIGPTGCGKTLLAETLA 132
Query: 185 RIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KA 243
R +VPFT+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDE+DKI K+
Sbjct: 133 RTFDVPFTMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKITRKS 192
Query: 244 ESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAF 303
++ + RDVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT +ILFICGGAF
Sbjct: 193 DNPSITRDVSGEGVQQALLKLMEGTTASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAF 250
Query: 304 VGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIG 363
GL++ I++R + SIGFGA V + D T +L+ + DL+ +GLIPEF+G
Sbjct: 251 AGLDRIIADRLEGKSIGFGAHVAS-------PDERRTGKILQECEPEDLLKFGLIPEFVG 303
Query: 364 RFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKN 423
R P+L +L L+E LV++L EP+NAL +QY+K+F + + KL FT+DAL IA+K + +
Sbjct: 304 RLPVLATLEDLDEAALVRILTEPRNALVKQYQKLFELEDAKLEFTEDALVAIARKGIERK 363
Query: 424 TGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKE 462
TGARGLR++LE IL + MFE+P + +V+ ++VDK+
Sbjct: 364 TGARGLRSILEGILLDTMFELPSLE----NVSEIIVDKD 398
>gi|420140224|ref|ZP_14647995.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa CIG1]
gi|403246963|gb|EJY60648.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa CIG1]
Length = 427
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 198/420 (47%), Positives = 265/420 (63%), Gaps = 65/420 (15%)
Query: 52 ESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGA 111
E+++E +G++ LP PKEI LD++VIGQERAKK
Sbjct: 55 EAQAEKSSGHK---------LPAPKEIRTILDQYVIGQERAKKV---------------L 90
Query: 112 CCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGP 171
AVYNHYKR+ N + D+I EL KSN+L++GP
Sbjct: 91 AVAVYNHYKRL---------------------------NQRDKKDDI-ELGKSNILMIGP 122
Query: 172 TGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGI 231
TGSGKTLLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ GI
Sbjct: 123 TGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGI 182
Query: 232 VYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPI 290
VYIDE+DKI K+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +
Sbjct: 183 VYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQV 240
Query: 291 DTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSG 350
DT++ILFICGGAF GLE+ I R IGF A VR+ + +A + V+
Sbjct: 241 DTRNILFICGGAFAGLERVIQNRSARGGIGFNAEVRSQEMGKKVGEA------FKEVEPE 294
Query: 351 DLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDD 410
DLV +GLIPEF+GR P++ +L L+E L+Q+L EPKNAL +QY K+F M V L F D
Sbjct: 295 DLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRPD 354
Query: 411 ALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
AL+ +A+KA+ + TGARGLR++LE IL + M+EIP + V+ V++D+ + P
Sbjct: 355 ALKAVARKALERKTGARGLRSILEGILLDTMYEIPSQQ----DVSKVVIDESVIDGSSQP 410
>gi|152995750|ref|YP_001340585.1| ATP-dependent protease ATP-binding subunit ClpX [Marinomonas sp.
MWYL1]
gi|226706592|sp|A6VW21.1|CLPX_MARMS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|150836674|gb|ABR70650.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Marinomonas
sp. MWYL1]
Length = 426
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 189/409 (46%), Positives = 267/409 (65%), Gaps = 55/409 (13%)
Query: 63 NRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRI 122
+ + E + +LPTP ++ LD++VIGQ++AK+ AVYNHYKR+
Sbjct: 59 SEDGESSDELPTPAKLSAALDDYVIGQDKAKRV---------------LAVAVYNHYKRL 103
Query: 123 YHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKT 182
H + D +EL KSN+LL+GPTGSGKTLLA+T
Sbjct: 104 RHQG---------------------------KTDTSIELGKSNILLIGPTGSGKTLLAQT 136
Query: 183 LARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV- 241
LAR+++VPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI
Sbjct: 137 LARVLDVPFTIADATTLTEAGYVGEDVENIIQKLLQNCDYDVEKAQRGIVYIDEIDKISR 196
Query: 242 KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGG 301
K+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGG
Sbjct: 197 KSDNPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSNILFICGG 254
Query: 302 AFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEF 361
AF GLE+ IS+R + SSIGF A V++ ++A + V++ DLV +GLIPEF
Sbjct: 255 AFAGLERVISDRTEKSSIGFSATVKSKEEGRSFSEA------VHRVETEDLVKFGLIPEF 308
Query: 362 IGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMA 421
+GR P++ +LS L+E+ L+ +L +PKNAL +QY+ +F + V+L FT ++LR AK A+
Sbjct: 309 VGRLPVVATLSELDEEALMTILSQPKNALVKQYQHLFELEGVELEFTPESLREAAKLALE 368
Query: 422 KNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+ TGARGLR++LE+ L + M+E+P + V V++D ++ AP
Sbjct: 369 RKTGARGLRSILESALLDCMYELP----TRNDVVKVVMDATSIRGETAP 413
>gi|421620750|ref|ZP_16061679.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC074]
gi|408700027|gb|EKL45499.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC074]
Length = 437
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 200/394 (50%), Positives = 263/394 (66%), Gaps = 50/394 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+ K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKT---------------LSVAVYNHYKRL------KVG 98
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
S H+ D VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 99 QSGHVSKD-------------------VEIAKSNILLIGPTGSGKTLLARTLARLLDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 140 AMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK +
Sbjct: 200 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIV 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ T L + L V+ DLV +GLIPEFIGR P++ +
Sbjct: 258 QQRQEKGGIGFTADVKNKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F+M NV L F D ALR +AK+A+ +NTGARGLR
Sbjct: 312 LEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLR 371
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
++LEN+L E M+++P T +GT +N +++ EA
Sbjct: 372 SILENVLLETMYDLPSRTDVGTVFINEAVINGEA 405
>gi|335996828|ref|ZP_08562745.1| ATP-dependent protease ATP-binding subunit [Lactobacillus ruminis
SPM0211]
gi|335351898|gb|EGM53389.1| ATP-dependent protease ATP-binding subunit [Lactobacillus ruminis
SPM0211]
Length = 385
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 259/401 (64%), Gaps = 56/401 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+ TPKEI K L+++VIGQ AKK+ AVYNHYKRI ++ L+ E
Sbjct: 35 DVLTPKEIVKTLNQYVIGQNEAKKT---------------LAVAVYNHYKRI-NAMLEDE 78
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+E EL+KSN+ L+GPTGSGKT LA++LA+++NVP
Sbjct: 79 -------------------------NEDTELQKSNICLIGPTGSGKTYLAQSLAKLLNVP 113
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT LT+AGYVGED E++L KLL AD+DVE AQRGI+YIDE+DKI K+E+ +
Sbjct: 114 FAIADATTLTEAGYVGEDVENILLKLLQNADYDVERAQRGIIYIDEIDKIAKKSENVSIT 173
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQ+LLK+LEGT+ NVP P G RKHP+ + I IDT +ILFI GGAF G+EK
Sbjct: 174 RDVSGEGVQQSLLKILEGTIANVP-PQGG-RKHPQQEFIQIDTTNILFIVGGAFDGIEKI 231
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ R D +IGFG R N + SL++ + DL+ +GLIPEFIGR PI+
Sbjct: 232 VKNRLGDKTIGFGVEARKNYDE--------SKSLMQQIIPEDLLKFGLIPEFIGRLPIIT 283
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L ED LV++L EPKNAL +QY K+ S ++ +L F DDALR +A+ A+ +NTGARGL
Sbjct: 284 ALEKLTEDDLVRILTEPKNALVKQYAKLLSFDDCELVFEDDALREVARLAIERNTGARGL 343
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E + + MF++P K ++ V++ KE V P
Sbjct: 344 RSIIEATMRDVMFDVPSDK----NIAKVVITKETVDGTGKP 380
>gi|260578312|ref|ZP_05846228.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Corynebacterium jeikeium ATCC 43734]
gi|258603614|gb|EEW16875.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Corynebacterium jeikeium ATCC 43734]
Length = 424
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 194/383 (50%), Positives = 249/383 (65%), Gaps = 49/383 (12%)
Query: 66 SEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHS 125
+E + LP P I + LD +VIGQ+ AK++ AVYNHYKRI
Sbjct: 53 AESSAKLPKPAAIAEFLDSYVIGQDEAKRT---------------LAVAVYNHYKRIQ-- 95
Query: 126 SLQKELVSDHLYVDSILGSGVKSGNCNVE-NDEIVELEKSNVLLMGPTGSGKTLLAKTLA 184
V+ N +D+ VEL KSN+L++GPTGSGKT LA++LA
Sbjct: 96 --------------------VEESNATARRSDDEVELAKSNILMLGPTGSGKTYLAQSLA 135
Query: 185 RIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KA 243
R+++VPF I DAT+LT+AGYVGED E++L KLL AADFDV AQRGI+Y+DEVDKI K+
Sbjct: 136 RMLDVPFAIADATSLTEAGYVGEDVENILLKLLQAADFDVAKAQRGIIYVDEVDKISRKS 195
Query: 244 ESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAF 303
E+ + RDVSGEGVQQALLK+LEGTV VP P G RKHP + I DTK++LFI GAF
Sbjct: 196 ENPSITRDVSGEGVQQALLKILEGTVAAVP-PQGG-RKHPNQEFIQFDTKNVLFIVAGAF 253
Query: 304 VGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIG 363
GLEK ISERR +GFGA + A + + V+ DLV +GLIPE IG
Sbjct: 254 SGLEKVISERRGKKGLGFGAEISAKSEE--------DPNPFQFVEPEDLVKFGLIPELIG 305
Query: 364 RFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKN 423
R P+L + L+ED LV+VL EPKN+L RQY+++F M+ V+L F D+ALR IA+KA+A+
Sbjct: 306 RLPVLTHVGHLDEDALVRVLTEPKNSLVRQYQRLFDMDGVRLTFEDEALREIAQKALARE 365
Query: 424 TGARGLRALLENILTEAMFEIPE 446
TGARGLR+++E +L MF IPE
Sbjct: 366 TGARGLRSIMETLLLPTMFSIPE 388
>gi|291548433|emb|CBL21541.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Ruminococcus
sp. SR1/5]
Length = 437
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 199/430 (46%), Positives = 270/430 (62%), Gaps = 62/430 (14%)
Query: 54 ESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACC 113
E E + + E I+L P+EI LDE+VIGQ+ AKK+
Sbjct: 47 EEEFSMYDHEADYETGINLLKPEEIHSILDEYVIGQDDAKKA---------------LSV 91
Query: 114 AVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTG 173
AVYNHYKRI S N++ VEL+KSN+L++GPTG
Sbjct: 92 AVYNHYKRILASR-------------------------NLD----VELQKSNILMLGPTG 122
Query: 174 SGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVY 233
SGKTLLA+TLAR++NVPF I DAT LT+AGYVGED E++L K++ AAD+D+E AQ GI+Y
Sbjct: 123 SGKTLLAQTLARLLNVPFAIADATTLTEAGYVGEDVENILLKIIQAADYDIERAQYGIIY 182
Query: 234 IDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDT 292
IDE+DKI K+E+ + RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT
Sbjct: 183 IDEIDKITRKSENTSITRDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDT 240
Query: 293 KDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDL 352
+ILFICGGAF GLEK I R+ SIGFGA V +L+ V D
Sbjct: 241 TNILFICGGAFDGLEKIIEARQDTKSIGFGAEVSEKEDRN-------VGEVLKEVMPEDF 293
Query: 353 VAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDAL 412
+ +GLIPEFIGR P++V+L +L+E+ L+++L EPKN+L +QY K+F ++ V+L F D+AL
Sbjct: 294 IKFGLIPEFIGRVPVVVTLDSLDEEALIRILKEPKNSLTKQYDKLFELDGVQLEFQDEAL 353
Query: 413 RLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGC 472
+A+K++ + TGARGLRA++E+ L + M++ P ++ +V KEAV P
Sbjct: 354 ETVARKSLERKTGARGLRAIMEHTLMDLMYKTP----SDDTIRKCIVTKEAVEGTGEP-- 407
Query: 473 GAKILHGDGE 482
+I+HG+ +
Sbjct: 408 --EIIHGEAK 415
>gi|363893164|ref|ZP_09320303.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Eubacteriaceae bacterium CM2]
gi|402838170|ref|ZP_10886682.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Eubacteriaceae bacterium OBRC8]
gi|361961688|gb|EHL14871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Eubacteriaceae bacterium CM2]
gi|402273674|gb|EJU22869.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Eubacteriaceae bacterium OBRC8]
Length = 417
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 263/401 (65%), Gaps = 56/401 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLP PKEI LDE++IGQE AKK ++YNHYKRIYH
Sbjct: 60 DLPKPKEIKDFLDEYIIGQEAAKKV---------------LSVSLYNHYKRIYH------ 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
VD K GN EL+KSN+LL+GPTGSGKTLLA+TLA+I++VP
Sbjct: 99 -------VD-------KKGNKT-------ELQKSNILLLGPTGSGKTLLAQTLAKIMDVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT LT+AGYVGED E++L KL+ AADF++E AQ+GIVYIDE+DKI K+E+ +
Sbjct: 138 FAIADATTLTEAGYVGEDVENILLKLIQAADFNIEKAQKGIVYIDEIDKITRKSENVSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGT+ NVP P G RKHP + I IDT +I+FI GGAF G+++
Sbjct: 198 RDVSGEGVQQALLKIIEGTLANVP-PQGG-RKHPNQELIQIDTTNIMFIVGGAFEGIDEI 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ +R + +GFG+ V + D + + ++V + DL+ YGLIPEF+GR PI+V
Sbjct: 256 VRKRLGKNVVGFGSKVVSK-------DTMKIGEIYKNVQTEDLLKYGLIPEFVGRLPIVV 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SL L+E+ LV++L EPKN+L +Q+KK+F ++NV L D+AL +AKKA+ + TGARGL
Sbjct: 309 SLDPLDEEALVKILKEPKNSLVKQFKKLFELDNVILEIDDEALTEVAKKAIERKTGARGL 368
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE + + M++IP V VL++K+ + P
Sbjct: 369 RSILEETMMDIMYDIP----SRDDVEKVLINKDCIDKKAQP 405
>gi|400406575|ref|YP_006589323.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [secondary
endosymbiont of Heteropsylla cubana]
gi|400364828|gb|AFP85895.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [secondary
endosymbiont of Heteropsylla cubana]
Length = 424
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 193/403 (47%), Positives = 266/403 (66%), Gaps = 57/403 (14%)
Query: 70 IDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQK 129
I LP P EI K +D++VIGQE+AKK AVYNHYKR+Y
Sbjct: 62 ISLPKPHEIRKKIDDYVIGQEKAKKV---------------LAVAVYNHYKRLYK----- 101
Query: 130 ELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNV 189
L++++ +EL KSN+LL+GPTGSGKTLLA+TLARI++V
Sbjct: 102 ------LHINNS-----------------IELGKSNILLIGPTGSGKTLLAETLARILDV 138
Query: 190 PFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNN 248
PFT+ DAT LT+AGYVGED E++L KLL ++D++ AQRGI+YIDE+DKI K+++ +
Sbjct: 139 PFTMADATTLTEAGYVGEDVENILQKLLQKCNYDIKEAQRGIIYIDEIDKISKKSDNPSI 198
Query: 249 GRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEK 308
RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + IDT ILFICGGAF GL K
Sbjct: 199 TRDVSGEGVQQALLKLIEGTLASVP-PQGG-RKHPQQEFLQIDTSKILFICGGAFSGLNK 256
Query: 309 TISERR-QDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPI 367
I +R + SIGF A ++ N ++ + ++L V+ DL+ +GLIPEFIGR PI
Sbjct: 257 IIEKRTYSNQSIGFAATLKTN------SEKVSNDNILVQVEPEDLIKFGLIPEFIGRLPI 310
Query: 368 LVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGAR 427
+ +L+ LNE+ L+Q+L PKNAL +QY+ +FS+ V+L F D+AL IAKKAM + TGAR
Sbjct: 311 IATLNELNEEALIQILCTPKNALIKQYQALFSIEGVQLEFHDNALIAIAKKAMTRKTGAR 370
Query: 428 GLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
GLR+++E+IL E+M+E+P + V V++D+ + P
Sbjct: 371 GLRSIVEDILLESMYELPSKE----GVEKVIIDEAVIEGKTTP 409
>gi|88810608|ref|ZP_01125865.1| ATP-dependent protease ATP-binding subunit [Nitrococcus mobilis
Nb-231]
gi|88792238|gb|EAR23348.1| ATP-dependent protease ATP-binding subunit [Nitrococcus mobilis
Nb-231]
Length = 425
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 190/400 (47%), Positives = 259/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQE+AKK AVYNHYKR+ S + E
Sbjct: 66 LPKPHEIKTVLDDYVIGQEQAKKV---------------LSVAVYNHYKRMEASHSKSE- 109
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 110 ---------------------------VELSKSNILLIGPTGSGKTLLAETLARLLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ+GIVYIDE+DKI KA++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQQGIVYIDEIDKISRKADNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + ++T +ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVNTGNILFICGGAFAGLEKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + IGF A ++ + + D+ L V+ DL+ YGLIPEF+GR P++ +
Sbjct: 261 QQRSERGGIGFSAEIKGREQRKSIGDS------LRDVEPEDLIRYGLIPEFVGRMPVVAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L+E+ L+++L+EPKNAL +QY+K+F+M L F +DALR +A+ AM + TGARGLR
Sbjct: 315 LTELDEEALMRILIEPKNALVKQYQKLFTMEGAALEFREDALRGVARNAMERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
L+E +L + M+E+P + V+ V+VD+ + P
Sbjct: 375 TLIERVLLDTMYELPSME----HVSKVVVDESVISGESKP 410
>gi|28198387|ref|NP_778701.1| ATP-dependent protease ATP-binding subunit ClpX [Xylella fastidiosa
Temecula1]
gi|182681029|ref|YP_001829189.1| ATP-dependent protease ATP-binding subunit ClpX [Xylella fastidiosa
M23]
gi|386084550|ref|YP_006000832.1| ATP-dependent protease ATP-binding subunit ClpX [Xylella fastidiosa
subsp. fastidiosa GB514]
gi|417558940|ref|ZP_12209899.1| ATP-dependent protease Clp, ATPase subunit ClpX [Xylella fastidiosa
EB92.1]
gi|32129455|sp|Q87E50.1|CLPX_XYLFT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238691092|sp|B2I8K4.1|CLPX_XYLF2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|28056457|gb|AAO28350.1| ATP-dependent Clp protease ATP binding subunit Clpx [Xylella
fastidiosa Temecula1]
gi|182631139|gb|ACB91915.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xylella
fastidiosa M23]
gi|307579497|gb|ADN63466.1| ATP-dependent protease ATP-binding subunit ClpX [Xylella fastidiosa
subsp. fastidiosa GB514]
gi|338178522|gb|EGO81508.1| ATP-dependent protease Clp, ATPase subunit ClpX [Xylella fastidiosa
EB92.1]
Length = 426
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 200/424 (47%), Positives = 270/424 (63%), Gaps = 62/424 (14%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E R+S LP PKEI + LD++VIGQ+RAK++
Sbjct: 48 NDIIREELEEKSQSARSS-----LPKPKEILEVLDQYVIGQQRAKRT------------- 89
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKRI S H +ND+I EL KSN+LL
Sbjct: 90 --LAVAVYNHYKRIE---------SRH------------------KNDDI-ELAKSNILL 119
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ
Sbjct: 120 VGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLHKCDYDVEKAQ 179
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
GIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ +
Sbjct: 180 HGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEF 237
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLES 346
+ +DTK+ILFICGGAF GL+K I +R + IGFG V+++ + +L
Sbjct: 238 LQVDTKNILFICGGAFAGLDKVIQQRCNEVGGIGFGVKVKSSESKRDV------GKVLAG 291
Query: 347 VDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLH 406
V+ DL+ +GLIPEF+GR P++ +L L+E LV++L EPKNA+ +Q+KK+F M NV+L
Sbjct: 292 VEPEDLIKFGLIPEFVGRLPVVATLDELDESALVKILTEPKNAITKQFKKLFEMENVELE 351
Query: 407 FTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
F DAL +A+KA+ + TGARGLR ++E +L + M+E+P ++ V+VD+ + +
Sbjct: 352 FRQDALSAVARKALKRKTGARGLRTIVELVLLDTMYELP----SQEGISKVVVDESVIEN 407
Query: 467 VDAP 470
P
Sbjct: 408 KSEP 411
>gi|262404274|ref|ZP_06080829.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio sp.
RC586]
gi|262349306|gb|EEY98444.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio sp.
RC586]
Length = 426
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 259/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP++I + LD++VIGQE AKK AVYNHYKR
Sbjct: 65 LPTPRKIREHLDDYVIGQEHAKKV---------------LAVAVYNHYKR---------- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
L +G +G+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 100 ----------LRNGDTTGDG-------VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI K+E+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKSENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR+ + L S L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVATGTGIGFGADVRSKDNSKTL------SELFTQVEPEDLVKYGLIPEFIGRLPVTA 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E L+Q+L EPKNAL +QY +F + NV L F +DAL+ IA KAM + TGARGL
Sbjct: 315 TLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAIAAKAMKRKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P + V+ V++D+ + +P
Sbjct: 375 RSILEAVLLETMYELPSME----EVSKVVIDESVINDESSP 411
>gi|85058650|ref|YP_454352.1| ATP-dependent protease ATP-binding subunit ClpX [Sodalis
glossinidius str. 'morsitans']
gi|123519920|sp|Q2NV78.1|CLPX_SODGM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|84779170|dbj|BAE73947.1| ATP-dependent Clp protease ATP-binding subunit [Sodalis
glossinidius str. 'morsitans']
Length = 424
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 261/401 (65%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRHHLDDYVIGQEKAKKV---------------LAVAVYNHYKRL--------- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ N +EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 100 ---------------RNGDTN----NGIELGKSNILLIGPTGSGKTLLAETLARFLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + + IGF A V+ G ++ + LL V+ DL+ +GLIPEFIGR P++
Sbjct: 259 EQRTETNRGIGFSATVK------GSSEKVTKGELLAQVEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKKAMA+ TGARGL
Sbjct: 313 TLNELSEEALIQILHEPKNALTKQYQALFNLEGVELEFRDEALTAIAKKAMARKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L E M+E+P SV V++D+ + P
Sbjct: 373 RSIVEGALLETMYELP----SQDSVEKVVIDEAVIAGQSEP 409
>gi|442805908|ref|YP_007374057.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
stercorarium subsp. stercorarium DSM 8532]
gi|442741758|gb|AGC69447.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
stercorarium subsp. stercorarium DSM 8532]
Length = 433
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 200/401 (49%), Positives = 258/401 (64%), Gaps = 55/401 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P P EI LD++VIGQE+AKK IL AVYNHYKRI
Sbjct: 60 DIPKPAEIKSILDQYVIGQEKAKK-----IL----------SVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
S V S + VEL+KSN+L++GPTGSGKTLLA+TLA+I+NVP
Sbjct: 97 ------------NSEVSSSD--------VELQKSNILMIGPTGSGKTLLAQTLAKILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT LT+AGYVGED E++L KL+ AAD+D+E A++GIVYIDE+DKI K+E+ +
Sbjct: 137 FAIADATTLTEAGYVGEDVENILLKLIQAADYDIERAEKGIVYIDEIDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ +VP P G RKHP + I IDT +ILFICGGAF GLEK
Sbjct: 197 RDVSGEGVQQALLKILEGTIASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFDGLEKI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R +IGFGA G L + V DL+ YG+IPEF+GR PI+
Sbjct: 255 IERRIGKRTIGFGA-----AHESGTERLKEVGELFQLVTPQDLLKYGMIPEFVGRVPIIA 309
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SL +L+ + L+ +L +P+NAL +QYKK+F ++ V+L +DAL IA KA+ + TGARGL
Sbjct: 310 SLHSLDREALIDILTKPRNALVKQYKKLFELDGVELVIEEDALHAIADKALERKTGARGL 369
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA++E IL + MFEIP K +V ++D+E + S P
Sbjct: 370 RAIMEEILIDVMFEIPSKK----NVEKCIIDREVILSGREP 406
>gi|390442512|ref|ZP_10230503.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
sp. T1-4]
gi|389834167|emb|CCI34629.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
sp. T1-4]
Length = 444
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 195/411 (47%), Positives = 262/411 (63%), Gaps = 50/411 (12%)
Query: 58 ENGNRNRNSEGNI---DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCA 114
E N+ R+ + +P P+EI K LD++VIGQ AKK A
Sbjct: 59 ERPNKRRSGQNKTTWEQIPKPREIKKYLDDYVIGQNEAKKV---------------LSVA 103
Query: 115 VYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGS 174
VYNHYKR+ QK +G + E+ +EL+KSN+LL+GPTGS
Sbjct: 104 VYNHYKRLKDIQTQK------------------AGGGSPEDS--IELQKSNILLIGPTGS 143
Query: 175 GKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYI 234
GKTLLA+TLA+I++VPF + DAT LT+AGYVGED E++L +LL AD DVE AQRGI+YI
Sbjct: 144 GKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGIIYI 203
Query: 235 DEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTK 293
DE+DKI K+E+ + RDVSGEGVQQALLKMLEGT+ NVP P G RKHP D I IDT
Sbjct: 204 DEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVP-PQGG-RKHPYQDCIQIDTS 261
Query: 294 DILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLV 353
+ILFICGGAFVGL+K I +R S+GF P G + V + LL+ + DLV
Sbjct: 262 NILFICGGAFVGLDKVIDQRLGKKSMGFIQP-----GDGQASKDKVAAGLLKQMTPDDLV 316
Query: 354 AYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALR 413
+G+IPEF+GR P+L +LS L+E+ L+ +L +P+NAL +QY+K+ M+NV+L F DA+
Sbjct: 317 KFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNALVKQYQKLLKMDNVQLEFKSDAVL 376
Query: 414 LIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
IA++A + TGAR LR ++E ++ + M+E+P K V L+ +E V
Sbjct: 377 AIAQEAYRRKTGARALRGIVEELMLDVMYELPSRK----DVKRCLITREMV 423
>gi|227328850|ref|ZP_03832874.1| ATP-dependent protease ATP-binding subunit ClpX [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 424
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 195/402 (48%), Positives = 261/402 (64%), Gaps = 59/402 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI + LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRRHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N ++ +EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 --------------------NGDSSNGIELGKSNILLIGPTGSGKTLLAETLARFLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQDS--SIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
E+R D+ IGF A V+ G D LL +V+ GDL+ +GLIPEFIGR P++
Sbjct: 259 -EQRTDTGRGIGFNATVK------GSADKATEGELLSNVEPGDLIKFGLIPEFIGRLPVV 311
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+ED L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKKAMA+ TGARG
Sbjct: 312 ATLRELSEDALIQILREPKNALTKQYQALFNLEGVELEFRDEALTAIAKKAMARKTGARG 371
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E L + M+++P SV+ V++D+ + P
Sbjct: 372 LRSIVEAALLDTMYDLP----SLDSVDKVVIDESVIAGQSEP 409
>gi|381169037|ref|ZP_09878212.1| ATP-dependent Clp protease ATP-binding subunit clpX [Phaeospirillum
molischianum DSM 120]
gi|380681826|emb|CCG43034.1| ATP-dependent Clp protease ATP-binding subunit clpX [Phaeospirillum
molischianum DSM 120]
Length = 421
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 193/383 (50%), Positives = 259/383 (67%), Gaps = 56/383 (14%)
Query: 64 RNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIY 123
R+S+G +PTPK+I LD++VIGQ+ AKK AV+NHYKR+
Sbjct: 58 RSSDG---VPTPKDIRAVLDDYVIGQDHAKKV---------------LSVAVHNHYKRLQ 99
Query: 124 HSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTL 183
H G KS VEL KSN+LL+GPTG GKTLLA+TL
Sbjct: 100 H--------------------GAKSNE--------VELAKSNILLIGPTGCGKTLLAQTL 131
Query: 184 ARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-K 242
ARI++VPFT+ DAT LT+AGYVGED E+++ KLL AA+++VE AQRGIVYIDEVDKI K
Sbjct: 132 ARILDVPFTMADATTLTEAGYVGEDVENIILKLLQAAEYNVERAQRGIVYIDEVDKISRK 191
Query: 243 AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGA 302
+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGA
Sbjct: 192 SDNPSITRDVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGA 249
Query: 303 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFI 362
F GLEK I R + +SIGFGA VR D T +L V+ DL+ +GLIPEF+
Sbjct: 250 FAGLEKIIGSRGKGTSIGFGAEVRG-------PDERRTGEILREVEPEDLLKFGLIPEFV 302
Query: 363 GRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAK 422
GR P+L +L L+ L+++L +PKNAL +QY+++F M +V+L F +DALR I++KA+ +
Sbjct: 303 GRLPVLATLEDLDVSALIEILSKPKNALVKQYQRLFEMEDVRLSFNEDALRSISEKAIQR 362
Query: 423 NTGARGLRALLENILTEAMFEIP 445
TGARGLR+++E+IL + MF++P
Sbjct: 363 KTGARGLRSIMESILLDTMFDLP 385
>gi|402819274|ref|ZP_10868843.1| clpX protein [alpha proteobacterium IMCC14465]
gi|402511978|gb|EJW22238.1| clpX protein [alpha proteobacterium IMCC14465]
Length = 423
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 195/402 (48%), Positives = 268/402 (66%), Gaps = 60/402 (14%)
Query: 64 RNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIY 123
+ SEG +P P+EI L+++VIGQ AK+ AV+NHYKR+
Sbjct: 59 KTSEG---VPPPQEIHDVLEDYVIGQAHAKRV---------------LSVAVHNHYKRLN 100
Query: 124 HSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTL 183
HS+ E +EL KSN+LL+GPTG GKTL A+TL
Sbjct: 101 HSAKNAE----------------------------IELSKSNILLIGPTGCGKTLFAQTL 132
Query: 184 ARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-K 242
A+I++VPFT+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K
Sbjct: 133 AKILDVPFTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRK 192
Query: 243 AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGA 302
A++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGA
Sbjct: 193 ADNPSITRDVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGA 250
Query: 303 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFI 362
F GLEK IS R ++SIGFGA V A T T LL++++ DL+ +GLIPEF+
Sbjct: 251 FAGLEKIISRRGGETSIGFGANV-AQPETKS------TGDLLKTLEPEDLLKFGLIPEFV 303
Query: 363 GRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAK 422
GR P++ +L L+E LV++L EPKNAL +QY+++F M + KL+F D+AL+ IA++A+ +
Sbjct: 304 GRLPVIATLEDLDEKALVRILTEPKNALVKQYQRLFDMEDTKLNFKDEALQAIARRAIER 363
Query: 423 NTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
TGARGLR+++E++L ++MFE+P T+ V V++ E V
Sbjct: 364 KTGARGLRSVMESMLLDSMFELPTTE----GVEEVVISPEVV 401
>gi|91787907|ref|YP_548859.1| ATP-dependent protease ATP-binding subunit ClpX [Polaromonas sp.
JS666]
gi|123165007|sp|Q12BY1.1|CLPX_POLSJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91697132|gb|ABE43961.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Polaromonas
sp. JS666]
Length = 421
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 195/405 (48%), Positives = 261/405 (64%), Gaps = 55/405 (13%)
Query: 67 EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSS 126
E DLPTP EI LD +VIGQE AK++ AVYNHYKR+ H
Sbjct: 60 ETRTDLPTPAEIKATLDGYVIGQEPAKRT---------------LAVAVYNHYKRLRHKE 104
Query: 127 LQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARI 186
K+ + VEL KSN+LL+GPTGSGKTLLA+TLAR
Sbjct: 105 KAKK--------------------------DDVELTKSNILLIGPTGSGKTLLAQTLART 138
Query: 187 VNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAES 245
+NVPF + DAT LT+AGYVGED E+++ KLL + +++VE AQ+GIVYIDE+DKI K+++
Sbjct: 139 LNVPFVMADATTLTEAGYVGEDVENIIQKLLQSCNYEVERAQQGIVYIDEIDKISRKSDN 198
Query: 246 RNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVG 305
+ RDVSGEGVQQALLK++EGT+ +VP P G RKHP D + +DT +ILFICGGAF G
Sbjct: 199 PSITRDVSGEGVQQALLKLIEGTMASVP-PQGG-RKHPNQDFLQVDTTNILFICGGAFSG 256
Query: 306 LEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRF 365
LEK I R + S IGFGA V++ +T LT++ + V+ DL+ +GLIPE +GR
Sbjct: 257 LEKVIENRTEASGIGFGALVKSK-KTRSLTES------FKEVEPEDLIKFGLIPELVGRM 309
Query: 366 PILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTG 425
P++ +L+ L ED LVQ+L EPKNA+ +Q+ K+ SM V L AL+ IA+KA+A+ TG
Sbjct: 310 PVVATLAELTEDALVQILTEPKNAVVKQFSKLLSMEGVDLEIRPSALKAIARKALARKTG 369
Query: 426 ARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
ARGLR++LE L + MF++P S+V+ V+VD+ + AP
Sbjct: 370 ARGLRSILEQSLIDTMFDLP----NASNVDKVVVDESTIEENKAP 410
>gi|303257391|ref|ZP_07343404.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Burkholderiales bacterium 1_1_47]
gi|302859748|gb|EFL82826.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Burkholderiales bacterium 1_1_47]
Length = 441
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 190/380 (50%), Positives = 255/380 (67%), Gaps = 51/380 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTPKEI LD++VIGQE+AKK AVYNHYKR L+ +
Sbjct: 89 ELPTPKEIYANLDQYVIGQEQAKKV---------------LSVAVYNHYKR-----LRSK 128
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+ D ++DE VE++KSN+LL+GPTGSGKTLLA++LA+++NVP
Sbjct: 129 FIGD-------------------DSDEKVEIQKSNILLIGPTGSGKTLLAQSLAKMLNVP 169
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT LT+AGYVGED E+V+ KLL + + D++ AQ GI+Y+DE+DKI K+E+ +
Sbjct: 170 FAIADATTLTEAGYVGEDVENVILKLLQSCNMDLKRAQMGIIYLDEIDKIARKSENPSIT 229
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGTV NVP G RKHP+G+NIP+DT +ILFICGGAF GL+K
Sbjct: 230 RDVSGEGVQQALLKLVEGTVANVPAA--GGRKHPQGNNIPVDTSNILFICGGAFEGLDKI 287
Query: 310 ISERRQDSSIGFGAPVR-ANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I R + S IGF A V+ A+ R+ G +L +++ DLV YGLIPE +GR P++
Sbjct: 288 IRRRTERSGIGFEADVKGADDRSEG--------EVLRDIEAKDLVRYGLIPELVGRLPVI 339
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E+ L+++L EPKNA+ +QY ++F + V L DAL+ AK A + TGARG
Sbjct: 340 ATLDDLDEEALIRILTEPKNAVLKQYARLFELEGVVLEVEPDALKEAAKMAQERKTGARG 399
Query: 429 LRALLENILTEAMFEIPETK 448
LR+++EN L AMFEIP K
Sbjct: 400 LRSIIENALLSAMFEIPSRK 419
>gi|238754236|ref|ZP_04615593.1| ATP-dependent Clp protease ATP-binding subunit clpX [Yersinia
ruckeri ATCC 29473]
gi|238707483|gb|EEP99843.1| ATP-dependent Clp protease ATP-binding subunit clpX [Yersinia
ruckeri ATCC 29473]
Length = 423
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 199/422 (47%), Positives = 268/422 (63%), Gaps = 62/422 (14%)
Query: 51 IESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIG 110
I E + + +R R+S LPTP EI + LD++VIGQE AKK
Sbjct: 48 IREEIKEVSPHRERSS-----LPTPHEIRRHLDDYVIGQEPAKKV--------------- 87
Query: 111 ACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMG 170
AVYNHYKR+ N + +EL KSN+LL+G
Sbjct: 88 LAVAVYNHYKRLR----------------------------NGDTSNGIELGKSNILLIG 119
Query: 171 PTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRG 230
PTGSGKTLLA+TLAR ++VPFT+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRG
Sbjct: 120 PTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRG 179
Query: 231 IVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIP 289
IVYIDE+DKI K+++ + RDVSGEGVQQALLK++EGT+ VP P G RKHP+ + +
Sbjct: 180 IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQ 237
Query: 290 IDTKDILFICGGAFVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVD 348
+DT ILFICGGAF GL+K I +R + IGFGA V+ G ++ LL +
Sbjct: 238 VDTSKILFICGGAFAGLDKVIGQRLNTGTGIGFGATVK------GKSEKATEGELLRQAE 291
Query: 349 SGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFT 408
DL+ +GLIPEFIGR P++ +LS L+ED L+Q+L EPKNAL +QY+ +F++ V+L F
Sbjct: 292 PEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFNLEGVELEFR 351
Query: 409 DDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVD 468
D+AL IAKKAMA+ TGARGLR+++E L + M+++P + SV+ V+VD+ +
Sbjct: 352 DEALTAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSLE----SVDKVVVDESVIEGQS 407
Query: 469 AP 470
AP
Sbjct: 408 AP 409
>gi|119384011|ref|YP_915067.1| ATP-dependent protease ATP-binding subunit ClpX [Paracoccus
denitrificans PD1222]
gi|166214797|sp|A1B1H7.1|CLPX_PARDP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|119373778|gb|ABL69371.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Paracoccus
denitrificans PD1222]
Length = 421
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 183/375 (48%), Positives = 258/375 (68%), Gaps = 54/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EIC LD++VIGQE AK+ AV+NHYKR+ HSS
Sbjct: 63 VPTPREICNVLDDYVIGQEHAKRV---------------LSVAVHNHYKRLNHSS----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ D +EL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ----------------------KTD--IELAKSNILLIGPTGCGKTLLAQTLARILDVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 139 TMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL++ I
Sbjct: 199 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDRII 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
++R + +++GFGA V+ + G L + ++ DL+ +GLIPEF+GR P++ +
Sbjct: 257 AQRNKGTAMGFGAAVKEDDDKG-------VGELFKQLEPEDLLKFGLIPEFVGRLPVIAT 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+ +L +PKNAL +QY+++F + +VKL FT+DAL IAK+A+ + TGARGLR
Sbjct: 310 LGDLDEQALITILTQPKNALVKQYQRLFDLESVKLTFTEDALTAIAKRAIKRKTGARGLR 369
Query: 431 ALLENILTEAMFEIP 445
+++E+IL + MF++P
Sbjct: 370 SIMEDILLDTMFDLP 384
>gi|365873787|ref|ZP_09413320.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermanaerovibrio velox DSM 12556]
gi|363983874|gb|EHM10081.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermanaerovibrio velox DSM 12556]
Length = 429
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 192/394 (48%), Positives = 256/394 (64%), Gaps = 55/394 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P P EI LD++VIGQ++AKK AVYNHY+RI
Sbjct: 73 IPRPDEIKSFLDQYVIGQDQAKKV---------------LSVAVYNHYRRI--------- 108
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ ++E VEL KSNVLL+GPTGSGKTLLA+TLAR++ VPF
Sbjct: 109 -------------------TSAPDEEDVELPKSNVLLVGPTGSGKTLLAQTLARLLKVPF 149
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L +LL AAD+DV+AA+RGI+YIDE+DKI K+ES + R
Sbjct: 150 AIADATTLTEAGYVGEDVENILVRLLQAADYDVKAAERGIIYIDEIDKISRKSESPSITR 209
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALL++LEGTV NV P G RKHP D I +DTK+ILFICGGAF GLE I
Sbjct: 210 DVSGEGVQQALLRILEGTVANV--PPKGGRKHPNQDFIQVDTKNILFICGGAFDGLEPII 267
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+ R IGFG V D +SL + + + DL+ YG IPEF+GR P++V
Sbjct: 268 ARRTNKKVIGFGGDV------ASAKDLDKRNSLYKDLIADDLITYGFIPEFVGRLPVIVP 321
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L +L+E+ L+++L EP+NAL +QY+++F M+ V L FT DA+R IA+KA+ + TGAR LR
Sbjct: 322 LESLDEEALIRILQEPRNALIKQYQRIFEMDKVSLEFTQDAIRAIARKALERKTGARALR 381
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E+I+ + M+E+P S V VL++ + V
Sbjct: 382 SIMESIMLDLMYEMPSR---ASRVGKVLINDKVV 412
>gi|322418660|ref|YP_004197883.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Geobacter sp.
M18]
gi|320125047|gb|ADW12607.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Geobacter sp.
M18]
Length = 417
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 191/400 (47%), Positives = 260/400 (65%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P+EI + LDE+VIGQ RAKK AVYNHYKR+ ++
Sbjct: 63 LPKPQEIKEVLDEYVIGQARAKKV---------------LAVAVYNHYKRVEATT----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G+ VE++KSN+LL+GPTGSGKTLLA+TLARI+ VPF
Sbjct: 103 ---------------KPGD--------VEMQKSNILLLGPTGSGKTLLAQTLARILKVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ LL AAD+DVE AQ+GI+YIDE+DKI K++S + R
Sbjct: 140 AMADATNLTEAGYVGEDVENIILTLLQAADYDVEKAQKGIIYIDEIDKIARKSDSPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ +V P G RKHP+ + + +DT +ILF+CGGAF GL+ I
Sbjct: 200 DVSGEGVQQALLKIIEGTIASV--PPKGGRKHPQQEFLKVDTTNILFVCGGAFPGLDSII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R ++GFGA V+ + LL V DL+ +G IPEF+GR P+L S
Sbjct: 258 QQRIGVKTLGFGADVKKKVEKKA-------GELLAGVTPEDLLKFGFIPEFVGRLPMLAS 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
LS L+E+ +VQ+L EPKNAL +QY+K+F M +VKL FTD +L IA++A+ + TGARGLR
Sbjct: 311 LSELDEEAMVQILKEPKNALIKQYQKLFEMEHVKLKFTDGSLIAIAREALKRKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LEN + + M+EIP S V V++ +E + + + P
Sbjct: 371 SILENAMLDIMYEIP----SQSMVKEVVISEEVIYNKEKP 406
>gi|256828015|ref|YP_003156743.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Desulfomicrobium baculatum DSM 4028]
gi|256577191|gb|ACU88327.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Desulfomicrobium baculatum DSM 4028]
Length = 416
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 195/399 (48%), Positives = 265/399 (66%), Gaps = 55/399 (13%)
Query: 58 ENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYN 117
+N NR + + + D+P P+EI LD++V+GQ+ AKK IL AVYN
Sbjct: 48 KNDNRKEDIDSS-DIPLPQEIKAALDDYVVGQDDAKK-----IL----------SVAVYN 91
Query: 118 HYKRI-YHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGK 176
HYKRI YH+ LV D VEL+KSN+LL+GPTGSGK
Sbjct: 92 HYKRIKYHA-----LVKDD-----------------------VELDKSNILLIGPTGSGK 123
Query: 177 TLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDE 236
TLLA+TLARI+ VPF I DAT LT+AGYVGED E++L +L+ AD+++E A +GI+Y+DE
Sbjct: 124 TLLAQTLARILKVPFAIADATTLTEAGYVGEDVENILVQLVQNADYNLETAAKGIIYVDE 183
Query: 237 VDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDI 295
+DKI K++S + RDVSGEGVQQALLK++EGTV N IP G RKHP+ + I +DT +I
Sbjct: 184 IDKISRKSDSPSITRDVSGEGVQQALLKIIEGTVAN--IPPKGGRKHPQQEFIRLDTSNI 241
Query: 296 LFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAY 355
LFI GGAF+GL++ + +R Q SS+GFGA +R T SLL+ V DL+ +
Sbjct: 242 LFIVGGAFIGLDEMVKQRVQGSSMGFGATMRRKQDDN-------TDSLLKQVHPMDLIRF 294
Query: 356 GLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLI 415
GLIPEF GR ++ SL+ LNED L+++L EPKNAL +QY+KMF + NV+L FT +AL+ +
Sbjct: 295 GLIPEFTGRISVITSLTELNEDDLMRILQEPKNALIKQYQKMFELENVELKFTQNALKAL 354
Query: 416 AKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSV 454
A +A+ TGARGLR+++E+I+ + M+ +P TK T V
Sbjct: 355 AARAIKLETGARGLRSVMESIMLDIMYTLPSTKDVTECV 393
>gi|254282549|ref|ZP_04957517.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [gamma
proteobacterium NOR51-B]
gi|219678752|gb|EED35101.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [gamma
proteobacterium NOR51-B]
Length = 427
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 192/401 (47%), Positives = 260/401 (64%), Gaps = 54/401 (13%)
Query: 65 NSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYH 124
+ +G+ LP P EI + LD++VIGQ+RAK+ AVYNHYKR+ +
Sbjct: 58 SEQGSDSLPVPHEIKQILDQYVIGQQRAKRV---------------LSVAVYNHYKRLRY 102
Query: 125 SSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLA 184
+ KSG +VE L KSN+LL+GPTGSGKTLLA+TLA
Sbjct: 103 AP--------------------KSGGDDVE------LSKSNILLVGPTGSGKTLLAETLA 136
Query: 185 RIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KA 243
R+++VPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+
Sbjct: 137 RLLDVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVERAQVGIVYIDEIDKISRKS 196
Query: 244 ESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAF 303
++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF
Sbjct: 197 DNPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSNILFICGGAF 254
Query: 304 VGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIG 363
GL+K I R + IGF A V++ T + L ++ DLV YGLIPEF+G
Sbjct: 255 AGLDKVIKNRSEKGGIGFAAEVKSKDETRKFGET------LSDLEPEDLVQYGLIPEFVG 308
Query: 364 RFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKN 423
R P++ +L L+E L+Q+L EP+NAL +QY KMF M V++ F +D LR +A+KAM +
Sbjct: 309 RLPVIATLEELDEAALIQILTEPRNALTKQYAKMFDMEGVEIDFREDGLRAVAEKAMERK 368
Query: 424 TGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
TGARGLR++LE +L ++M+ IP S V ++VD+ +
Sbjct: 369 TGARGLRSILEGVLLDSMYNIP----SESGVAKIVVDESVI 405
>gi|428223755|ref|YP_007107852.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Geitlerinema
sp. PCC 7407]
gi|427983656|gb|AFY64800.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Geitlerinema
sp. PCC 7407]
Length = 445
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 199/411 (48%), Positives = 263/411 (63%), Gaps = 51/411 (12%)
Query: 56 ETENGNRNRNSEGNI-DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCA 114
+T R+S ++ +P P+EI K LDE VIGQE AKK I + A
Sbjct: 63 QTPEKRHTRSSNLSLGQMPKPQEIKKYLDEHVIGQESAKK--ILSV-------------A 107
Query: 115 VYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGS 174
VYNHYKR+ + I G G + D+ VEL+KSN+LL+GPTG
Sbjct: 108 VYNHYKRLSY----------------IQGKG------KGDFDDAVELQKSNILLIGPTGC 145
Query: 175 GKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYI 234
GKTLLA+TLA I++VPF + DAT LT+AGYVGED E++L +LL AD DVE AQRGI+YI
Sbjct: 146 GKTLLAQTLAEILDVPFAVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGIIYI 205
Query: 235 DEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTK 293
DE+DKI K+E+ + RDVSGEGVQQALLKMLEGTV NVP P G RKHP D I IDT
Sbjct: 206 DEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVP-PQGG-RKHPYQDCIQIDTS 263
Query: 294 DILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLV 353
+ILFICGGAFVGLEK++ +R SIGF P ++ + +L+ ++ DLV
Sbjct: 264 NILFICGGAFVGLEKSVEQRIGKKSIGFVQP------NDPMSKEKRAADVLKHLEPDDLV 317
Query: 354 AYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALR 413
+G+IPEFIGR PI+ L L+ED L ++L EP+NAL +QY+K+ M+NV+L F +A+R
Sbjct: 318 KFGMIPEFIGRVPIVAVLDPLDEDALTEILTEPRNALVKQYQKLLKMDNVQLEFKQEAVR 377
Query: 414 LIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
IA++A + TGAR LR ++E ++ + M+E+P K V L+ +E V
Sbjct: 378 AIAQEAYRRKTGARALRGIVEELMLDVMYELPSRK----DVTRCLITREMV 424
>gi|398827197|ref|ZP_10585411.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Phyllobacterium sp. YR531]
gi|398220043|gb|EJN06503.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Phyllobacterium sp. YR531]
Length = 424
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 188/375 (50%), Positives = 256/375 (68%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI LD++VIGQ AK+ AV+NHYKR+ H+S
Sbjct: 65 VPTPQEIMAVLDDYVIGQNHAKRV---------------LSVAVHNHYKRLAHAS----- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+N+E VEL KSN+LL+GPTG GKT LA++LARI++VPF
Sbjct: 105 ----------------------KNNE-VELAKSNILLVGPTGCGKTYLAQSLARIIDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEVDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 202 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGF A V+A D ++ ++ DL+ +GLIPEF+GR P++ +
Sbjct: 260 SARGEKTSIGFSAAVKA-------PDDRRVGAIFRELEPEDLLKFGLIPEFVGRLPVIAT 312
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E LVQ+L EPKNAL +QY+++F M NV+L F +DAL+ IAK+A+A+ TGARGLR
Sbjct: 313 LEDLDEVALVQILSEPKNALVKQYQRLFDMENVELTFHEDALKAIAKRAIARKTGARGLR 372
Query: 431 ALLENILTEAMFEIP 445
+++E IL + M+E+P
Sbjct: 373 SIMEKILLDTMYELP 387
>gi|424941030|ref|ZP_18356793.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
aeruginosa NCMG1179]
gi|346057476|dbj|GAA17359.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
aeruginosa NCMG1179]
Length = 436
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 195/400 (48%), Positives = 256/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 75 LPAPKEIRTILDQYVIGQERAKKV---------------LAVAVYNHYKRL--------- 110
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + D+I EL KSN+L++GPTGSGKTLLA+TLAR++NVPF
Sbjct: 111 ------------------NQRDKKDDI-ELGKSNILMIGPTGSGKTLLAETLARLLNVPF 151
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 152 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 211
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLE+ I
Sbjct: 212 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFAGLERVI 269
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + +A + V+ DLV +GLIPEF+GR P++ +
Sbjct: 270 QNRSARGGIGFNAEVRSQEMGKKVGEA------FKEVEPEDLVKFGLIPEFVGRLPVIAT 323
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +A+KA+ + TGARGLR
Sbjct: 324 LDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRPDALKAVARKALERKTGARGLR 383
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE IL + M+EIP + V+ V++D+ + P
Sbjct: 384 SILEGILLDTMYEIPSQQ----DVSKVVIDESVIDGSSQP 419
>gi|117620337|ref|YP_856543.1| ATP-dependent protease ATP-binding subunit ClpX [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|411009094|ref|ZP_11385423.1| ATP-dependent protease ATP-binding subunit ClpX [Aeromonas
aquariorum AAK1]
gi|423196866|ref|ZP_17183449.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Aeromonas
hydrophila SSU]
gi|226706638|sp|A0KJU2.1|CLPX_AERHH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|117561744|gb|ABK38692.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|404631616|gb|EKB28247.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Aeromonas
hydrophila SSU]
Length = 424
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 195/402 (48%), Positives = 261/402 (64%), Gaps = 57/402 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTP EI LD++VIGQE AKK AVYNHYKR
Sbjct: 63 ELPTPHEIRAHLDDYVIGQEYAKKV---------------LAVAVYNHYKR--------- 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
L SG +SG VEL KSN+LL+GPTGSGKTLLA+TLAR+++VP
Sbjct: 99 -----------LRSGSESGG--------VELGKSNILLIGPTGSGKTLLAETLARLLDVP 139
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
FT+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ +
Sbjct: 140 FTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSIT 199
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT ILFICGGAF GL+K
Sbjct: 200 RDVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKV 257
Query: 310 ISERR-QDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I +R + + IGFGA V++ L+++ V+ DL+ YGLIPEFIGR P++
Sbjct: 258 IEQRSVKGTGIGFGAEVKSKSAKATLSESFA------KVEPEDLIKYGLIPEFIGRLPVV 311
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L+ L+E L+Q+L EPKNAL +QY +F + V+L F DDAL IA+KAM + TGARG
Sbjct: 312 ATLTELDEAALIQILKEPKNALTKQYAALFDLEGVELEFRDDALNAIARKAMERKTGARG 371
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E +L + M+++P V+ V++D+ + AP
Sbjct: 372 LRSIVEAVLLDTMYDLP----SLDGVSKVVIDETVIKGDSAP 409
>gi|331001371|ref|ZP_08324995.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Parasutterella excrementihominis YIT 11859]
gi|329568630|gb|EGG50432.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Parasutterella excrementihominis YIT 11859]
Length = 441
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 190/380 (50%), Positives = 255/380 (67%), Gaps = 51/380 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTPKEI LD++VIGQE+AKK AVYNHYKR L+ +
Sbjct: 89 ELPTPKEIYANLDQYVIGQEQAKKV---------------LSVAVYNHYKR-----LRSK 128
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+ D ++DE VE++KSN+LL+GPTGSGKTLLA++LA+++NVP
Sbjct: 129 FIGD-------------------DSDEKVEIQKSNILLIGPTGSGKTLLAQSLAKMLNVP 169
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT LT+AGYVGED E+V+ KLL + + D++ AQ GI+Y+DE+DKI K+E+ +
Sbjct: 170 FAIADATTLTEAGYVGEDVENVILKLLQSCNMDLKRAQMGIIYLDEIDKIARKSENPSIT 229
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGTV NVP G RKHP+G+NIP+DT +ILFICGGAF GL+K
Sbjct: 230 RDVSGEGVQQALLKLVEGTVANVPAA--GGRKHPQGNNIPVDTSNILFICGGAFEGLDKI 287
Query: 310 ISERRQDSSIGFGAPVR-ANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I R + S IGF A V+ A+ R+ G +L +++ DLV YGLIPE +GR P++
Sbjct: 288 IRRRTERSGIGFEADVKGADDRSEG--------EVLRDIEAKDLVRYGLIPELVGRLPVI 339
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E+ L+++L EPKNA+ +QY ++F + V L DAL+ AK A + TGARG
Sbjct: 340 ATLDDLDEEALIRILTEPKNAVLKQYARLFELEGVVLEVEPDALKEAAKMAQERKTGARG 399
Query: 429 LRALLENILTEAMFEIPETK 448
LR+++EN L AMFEIP K
Sbjct: 400 LRSIIENALLSAMFEIPSRK 419
>gi|325847170|ref|ZP_08169969.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
gi|325480950|gb|EGC83996.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
Length = 399
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 198/410 (48%), Positives = 263/410 (64%), Gaps = 62/410 (15%)
Query: 56 ETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAV 115
E EN +++N +I+L P+EI + LD++VI QE AKK+ +V
Sbjct: 42 ERENFGQSKNM--DIELAKPREIKEYLDQYVIQQEMAKKT---------------LSVSV 84
Query: 116 YNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSG 175
YNHYKRI N N + D+ VEL+KSN+L++GPTGSG
Sbjct: 85 YNHYKRI---------------------------NSNYDKDDGVELQKSNILMLGPTGSG 117
Query: 176 KTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYID 235
KTLLA+TLA+ +NVPF I DAT+LT+AGYVGED E+++ KL+ AAD+D+E AQ GI+YID
Sbjct: 118 KTLLAQTLAKKLNVPFAIADATSLTEAGYVGEDVENIILKLVQAADYDIELAQTGIIYID 177
Query: 236 EVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKD 294
E+DKI K+E+ + RDVSGEGVQQALLK++EGTV NVP P G RKHP + I +DT +
Sbjct: 178 EIDKITRKSENPSITRDVSGEGVQQALLKLIEGTVANVP-PQGG-RKHPSQEYIQVDTTN 235
Query: 295 ILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVA 354
ILFI GGAF G++ I +R SIGFG+ N L V + DL+
Sbjct: 236 ILFIVGGAFDGIKDIIKQRTNKKSIGFGSDDSENKEIS-----------LADVRTEDLLK 284
Query: 355 YGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRL 414
YGLIPEFIGR PI+VSL L+ D LV++L EPKN+L +QY+K+F ++ VKL F D+A+R
Sbjct: 285 YGLIPEFIGRVPIVVSLEDLDVDSLVKILKEPKNSLLKQYQKLFELDGVKLTFEDEAVRE 344
Query: 415 IAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
IAKKA + TGARGLR +LE++L + M+EIP + V+V K A+
Sbjct: 345 IAKKAFKQETGARGLRTILEDLLLDVMYEIP----SKDHIKEVIVSKGAI 390
>gi|289422715|ref|ZP_06424555.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Peptostreptococcus anaerobius 653-L]
gi|429728763|ref|ZP_19263467.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Peptostreptococcus anaerobius VPI 4330]
gi|289156894|gb|EFD05519.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Peptostreptococcus anaerobius 653-L]
gi|429147738|gb|EKX90760.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Peptostreptococcus anaerobius VPI 4330]
Length = 422
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 189/381 (49%), Positives = 256/381 (67%), Gaps = 57/381 (14%)
Query: 68 GNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSL 127
G ++LP PKE+ + L+++VIGQ AKK+ AVYNHYKRIY
Sbjct: 58 GEMNLPKPKEMMEILNDYVIGQSGAKKA---------------LSVAVYNHYKRIYSE-- 100
Query: 128 QKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIV 187
N D VE++KSN+LL+GPTGSGKTLLA+TLA+I+
Sbjct: 101 ------------------------NTTGD--VEVQKSNILLLGPTGSGKTLLAQTLAKIL 134
Query: 188 NVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESR 246
NVPF I DAT+LT+AGYVGED E+++ KL+ AADFDVE AQ+GI+YIDE+DKI K+E+
Sbjct: 135 NVPFAIADATSLTEAGYVGEDVENIILKLVQAADFDVERAQKGIIYIDEIDKISRKSENP 194
Query: 247 NNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGL 306
+ RDVSGEGVQQALLK+LEGTV NV P +G RKHP + + +DT +ILFI GGAF G+
Sbjct: 195 SITRDVSGEGVQQALLKILEGTVANV--PPSGGRKHPHQEFLKVDTTNILFILGGAFDGI 252
Query: 307 EKTISERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGR 364
EK + +R ++ S+GFGA + + +M G L +V DL+ +GLIPEFIGR
Sbjct: 253 EKIVQKRGKEKSLGFGAKIESKNDMDIGKLYSQVVPD---------DLLKFGLIPEFIGR 303
Query: 365 FPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNT 424
P+L +L L+E+ LV++L EPKNAL +QY K+F ++ KL F +DALR +A+KA+ + T
Sbjct: 304 VPVLATLDLLDEESLVKILTEPKNALTKQYAKLFEYDDAKLEFEEDALRAVAQKAIERKT 363
Query: 425 GARGLRALLENILTEAMFEIP 445
GARGLR+++E+ L + M+E+P
Sbjct: 364 GARGLRSIIEHALMDVMYEVP 384
>gi|387929929|ref|ZP_10132606.1| ATP-dependent protease ATP-binding subunit ClpX [Bacillus
methanolicus PB1]
gi|387586747|gb|EIJ79071.1| ATP-dependent protease ATP-binding subunit ClpX [Bacillus
methanolicus PB1]
Length = 421
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 201/412 (48%), Positives = 262/412 (63%), Gaps = 62/412 (15%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI LDE+VIGQ++AKKS AVYNHYKRI
Sbjct: 60 DVPKPKEILDILDEYVIGQDQAKKS---------------LSVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N N + D+ VEL KSN+ ++GPTGSGKTLLA+TLARI+NVP
Sbjct: 97 -------------------NSNSKIDD-VELSKSNICMIGPTGSGKTLLAQTLARILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A++GI+YIDE+DKI K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIIYIDEIDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFICGGAF G+E
Sbjct: 197 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFDGIEPI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R IGFG + + + LL V DL+ +GLIPEF+GR P++
Sbjct: 255 IKRRLGQKVIGFGGDSKLS--------EVDEKELLSKVLPEDLLKFGLIPEFVGRLPVIA 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SL L+ED LV++L +PKNAL +QY+KM ++ V+L F D AL+ IAKKA+ + TGARGL
Sbjct: 307 SLEQLDEDALVEILTKPKNALVKQYQKMLELDGVELEFEDGALQEIAKKAIERKTGARGL 366
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDG 481
R+++E I+ + MFE+P + ++ KE V + AP K++ DG
Sbjct: 367 RSIIEGIMLDVMFELP----SRDDITKCIITKETVANNSAP----KLILNDG 410
>gi|320530214|ref|ZP_08031284.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Selenomonas
artemidis F0399]
gi|320137647|gb|EFW29559.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Selenomonas
artemidis F0399]
Length = 421
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 258/401 (64%), Gaps = 56/401 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI LD++VIGQ+ AKKS AVYNHYKRI
Sbjct: 60 DVPKPKEIRHILDQYVIGQDEAKKS---------------LSVAVYNHYKRINA------ 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
G G +ND+ VEL KSN+L++GPTGSGKTLLA+TLARI+NVP
Sbjct: 99 ------------GHG--------KNDD-VELRKSNILMLGPTGSGKTLLAQTLARILNVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E AQRGI+Y+DE+DKI K+E+ +
Sbjct: 138 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAQRGIIYVDEIDKIARKSENPSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQ LLK+LEGT +VP P G RKHP+ + + IDT +ILFICGGAF G+E+
Sbjct: 198 RDVSGEGVQQGLLKILEGTTASVP-PQGG-RKHPQQELLQIDTTNILFICGGAFDGIEEI 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R +GFGA VR+ R L V DL+ GLIPEFIGR P++V
Sbjct: 256 IESRLGKKQMGFGAEVRSKKRVS-------VGESLSKVIPEDLMKNGLIPEFIGRLPVVV 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+LS+L+E +V++L EPKNAL +Q++++ M+ V+L F DAL LIAK+A+ TGARGL
Sbjct: 309 TLSSLDEAAMVRILTEPKNALVKQFQRLLDMDGVRLTFEQDALHLIAKEALTHKTGARGL 368
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA++E I+ M+E+P + V A V +E V + P
Sbjct: 369 RAIIEGIMRNVMYEVPSIQ----GVTACQVTREVVANHSDP 405
>gi|323340666|ref|ZP_08080918.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
ruminis ATCC 25644]
gi|417974333|ref|ZP_12615154.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus
ruminis ATCC 25644]
gi|323091789|gb|EFZ34409.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
ruminis ATCC 25644]
gi|346329330|gb|EGX97628.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus
ruminis ATCC 25644]
Length = 410
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 259/401 (64%), Gaps = 56/401 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+ TPKEI K L+++VIGQ AKK+ AVYNHYKRI ++ L+ E
Sbjct: 60 DVLTPKEIVKTLNQYVIGQNEAKKT---------------LAVAVYNHYKRI-NAMLEDE 103
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+E EL+KSN+ L+GPTGSGKT LA++LA+++NVP
Sbjct: 104 -------------------------NEDTELQKSNICLIGPTGSGKTYLAQSLAKLLNVP 138
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT LT+AGYVGED E++L KLL AD+DVE AQRGI+YIDE+DKI K+E+ +
Sbjct: 139 FAIADATTLTEAGYVGEDVENILLKLLQNADYDVERAQRGIIYIDEIDKIAKKSENVSIT 198
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQ+LLK+LEGT+ NVP P G RKHP+ + I IDT +ILFI GGAF G+EK
Sbjct: 199 RDVSGEGVQQSLLKILEGTIANVP-PQGG-RKHPQQEFIQIDTTNILFIVGGAFDGIEKI 256
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ R D +IGFG R N + SL++ + DL+ +GLIPEFIGR PI+
Sbjct: 257 VKNRLGDKTIGFGVEARKNYDE--------SKSLMQQIIPEDLLKFGLIPEFIGRLPIIT 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L ED LV++L EPKNAL +QY K+ S ++ +L F DDALR +A+ A+ +NTGARGL
Sbjct: 309 ALEKLTEDDLVRILTEPKNALVKQYAKLLSFDDCELVFEDDALREVARLAIERNTGARGL 368
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E + + MF++P K ++ V++ KE V P
Sbjct: 369 RSIIEATMRDVMFDVPSDK----NIAKVVITKETVDGTGKP 405
>gi|443660053|ref|ZP_21132511.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Microcystis
aeruginosa DIANCHI905]
gi|443332569|gb|ELS47169.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Microcystis
aeruginosa DIANCHI905]
Length = 425
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 194/411 (47%), Positives = 262/411 (63%), Gaps = 50/411 (12%)
Query: 58 ENGNRNRNSEGNI---DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCA 114
E N+ R+ + +P P+EI K LD++VIGQ AKK A
Sbjct: 40 ERPNKRRSGQNKTTWEQIPKPREIKKHLDDYVIGQNEAKKV---------------LSVA 84
Query: 115 VYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGS 174
VYNHYKR+ QK +G + E+ +EL+KSN+LL+GPTGS
Sbjct: 85 VYNHYKRLKDIQTQK------------------AGGGSPEDS--IELQKSNILLIGPTGS 124
Query: 175 GKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYI 234
GKTLLA+TLA+I++VPF + DAT LT+AGYVGED E++L +LL AD DVE AQRGI+YI
Sbjct: 125 GKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGIIYI 184
Query: 235 DEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTK 293
DE+DKI K+E+ + RDVSGEGVQQALLKMLEGT+ NVP P G RKHP D I IDT
Sbjct: 185 DEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVP-PQGG-RKHPYQDCIQIDTS 242
Query: 294 DILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLV 353
+ILFICGGAFVGL+K I +R S+GF P + + V + LL+ + DLV
Sbjct: 243 NILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDSQA-----SKDKVAAGLLKQMTPDDLV 297
Query: 354 AYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALR 413
+G+IPEF+GR P+L +LS L+E+ L+ +L +P+NAL +QY+K+ M+NV+L F DA+
Sbjct: 298 KFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNALVKQYQKLLKMDNVQLEFKSDAVL 357
Query: 414 LIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
IA++A + TGAR LR ++E ++ + M+E+P K V L+ +E V
Sbjct: 358 AIAQEAYRRKTGARALRGIVEELMLDVMYELPSRK----DVKRCLITREMV 404
>gi|312882506|ref|ZP_07742247.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309369906|gb|EFP97417.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 427
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 257/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P+EI + LD++VIGQ+ AKK AVYNHYKR+
Sbjct: 65 LPVPREIREHLDDYVIGQDYAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ + VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 ---------------RNGDTTSDG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR+ T L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVATGTGIGFGAEVRSKDETK------TVGELFTKVEPEDLVKYGLIPEFIGRLPVTT 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY +F + + +L F +DALR IAKKAM + TGARGL
Sbjct: 315 TLTELDEEALIQILCEPKNALTKQYAALFELEDTELEFREDALRAIAKKAMDRKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P + V+ V++D + AP
Sbjct: 375 RSILEGVLLETMYELPSME----DVSKVVIDDSVIKGESAP 411
>gi|269798317|ref|YP_003312217.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Veillonella
parvula DSM 2008]
gi|294792181|ref|ZP_06757329.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Veillonella
sp. 6_1_27]
gi|294794046|ref|ZP_06759183.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Veillonella
sp. 3_1_44]
gi|269094946|gb|ACZ24937.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Veillonella
parvula DSM 2008]
gi|294455616|gb|EFG23988.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Veillonella
sp. 3_1_44]
gi|294457411|gb|EFG25773.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Veillonella
sp. 6_1_27]
Length = 417
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 192/401 (47%), Positives = 262/401 (65%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTP+EI LDE+VIGQ+ AK I AVYNHYKR+
Sbjct: 59 ELPTPREIKAHLDEYVIGQDDAK---------------ISLAVAVYNHYKRLQTD----- 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
NV +D VEL+K+NVL +GPTGSGKTLLA+TLA+++ VP
Sbjct: 99 ---------------------NVVDD--VELQKANVLFIGPTGSGKTLLAQTLAKMLEVP 135
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L K++ AAD+D+ A+RGI+YIDE+DKI K+E+ +
Sbjct: 136 FAIADATSLTEAGYVGEDVENILLKIIQAADYDIARAERGIIYIDEIDKIARKSENPSIT 195
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + + IDT +ILFICGGAF G++K
Sbjct: 196 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPNQEMLQIDTTNILFICGGAFDGMDKV 253
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I++R ++GFGA V+ S++L+ V DL+ +GLIPEFIGR P++V
Sbjct: 254 ITKRTAKKTLGFGADVQRKEERN-------VSAILKDVVPEDLLKFGLIPEFIGRLPVMV 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+ D L+Q+L +PKNAL +QY+K+ S++ V+L FT+DAL IA +A+ + TGARGL
Sbjct: 307 TLDQLDRDALIQILTKPKNALTKQYEKILSLDGVELTFTEDALEEIADEALQRKTGARGL 366
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA++E ++ MFE+P V +V++E+V S P
Sbjct: 367 RAIIEKVMKRVMFEVP----SMPEVTKCIVNRESVLSTGEP 403
>gi|425465977|ref|ZP_18845280.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9809]
gi|389831695|emb|CCI25351.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9809]
Length = 444
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 197/411 (47%), Positives = 263/411 (63%), Gaps = 50/411 (12%)
Query: 58 ENGNRNRNSEGNI---DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCA 114
E N+ R+ + +P P+EI K LD++VIGQ AKK A
Sbjct: 59 ERPNKRRSGQNKTTWEQIPKPREIKKYLDDYVIGQNEAKKV---------------LSVA 103
Query: 115 VYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGS 174
VYNHYKR+ QK SG GN ++ +EL+KSN+LL+GPTGS
Sbjct: 104 VYNHYKRLKDIQTQK-------------ASG---GN----PEDGIELQKSNILLIGPTGS 143
Query: 175 GKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYI 234
GKTLLA+TLA+I++VPF + DAT LT+AGYVGED E++L +LL AD DVE AQRGI+YI
Sbjct: 144 GKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGIIYI 203
Query: 235 DEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTK 293
DE+DKI K+E+ + RDVSGEGVQQALLKMLEGT+ NVP P G RKHP D I IDT
Sbjct: 204 DEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVP-PQGG-RKHPYQDCIQIDTS 261
Query: 294 DILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLV 353
+ILFICGGAFVGL+K I +R S+GF P G + V + LL+ + DLV
Sbjct: 262 NILFICGGAFVGLDKVIDQRLGKKSMGFIQP-----GDGQASKDKVAAGLLKQMTPDDLV 316
Query: 354 AYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALR 413
+G+IPEF+GR P+L +LS L+E+ L+ +L +P+NAL +QY+K+ M+NV+L F DA+
Sbjct: 317 KFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNALVKQYQKLLKMDNVQLEFKSDAVL 376
Query: 414 LIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
IA++A + TGAR LR ++E ++ + M+E+P K V L+ +E V
Sbjct: 377 AIAQEAYRRKTGARALRGIVEELMLDVMYELPSRK----DVKRCLITREMV 423
>gi|425439907|ref|ZP_18820219.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9717]
gi|389719746|emb|CCH96447.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9717]
Length = 444
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 195/411 (47%), Positives = 262/411 (63%), Gaps = 50/411 (12%)
Query: 58 ENGNRNRNSEGNI---DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCA 114
E N+ R+ + +P P+EI K LD++VIGQ AKK A
Sbjct: 59 ERPNKRRSGQNKTTWEQIPKPREIKKHLDDYVIGQNEAKKV---------------LSVA 103
Query: 115 VYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGS 174
VYNHYKR+ QK +G + E+ +EL+KSN+LL+GPTGS
Sbjct: 104 VYNHYKRLKDIQTQK------------------AGGGSPEDS--IELQKSNILLIGPTGS 143
Query: 175 GKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYI 234
GKTLLA+TLA+I++VPF + DAT LT+AGYVGED E++L +LL AD DVE AQRGI+YI
Sbjct: 144 GKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGIIYI 203
Query: 235 DEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTK 293
DE+DKI K+E+ + RDVSGEGVQQALLKMLEGT+ NVP P G RKHP D I IDT
Sbjct: 204 DEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVP-PQGG-RKHPYQDCIQIDTS 261
Query: 294 DILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLV 353
+ILFICGGAFVGL+K I +R S+GF P + + V + LL+ + DLV
Sbjct: 262 NILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDSQA-----SKDKVAAGLLKQMTPDDLV 316
Query: 354 AYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALR 413
+G+IPEF+GR PIL +LS L+E+ L+ +L +P+NAL +QY+K+ M+NV+L F DA+
Sbjct: 317 KFGMIPEFVGRIPILAALSPLDEEALIAILTQPRNALVKQYQKLLKMDNVQLEFKSDAVL 376
Query: 414 LIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
IA++A + TGAR LR ++E ++ + M+E+P K V L+ +E V
Sbjct: 377 AIAQEAYRRKTGARALRGIVEELMLDVMYELPSRK----DVKRCLITREMV 423
>gi|365093544|ref|ZP_09330609.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax sp.
NO-1]
gi|363414424|gb|EHL21574.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax sp.
NO-1]
Length = 421
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 196/405 (48%), Positives = 259/405 (63%), Gaps = 55/405 (13%)
Query: 67 EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSS 126
EG DLPTP EI LD +VIGQ+ AK++ AVYNHYKR+ H
Sbjct: 60 EGRSDLPTPAEIKTNLDNYVIGQDVAKRT---------------LAVAVYNHYKRLRHK- 103
Query: 127 LQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARI 186
D + D VEL KSN+LL+GPTGSGKTLLA+TLAR+
Sbjct: 104 -------DKAHKDD------------------VELSKSNILLIGPTGSGKTLLAQTLARM 138
Query: 187 VNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAES 245
++VPF + DAT LT+AGYVGED E+++ KLL + +++VE AQRGIVYIDE+DKI K+++
Sbjct: 139 LDVPFVMADATTLTEAGYVGEDVENIVQKLLQSCNYEVERAQRGIVYIDEIDKISRKSDN 198
Query: 246 RNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVG 305
+ RDVSGEGVQQALLK++EGT+ +VP P G RKHP D + IDT +ILFICGGAF G
Sbjct: 199 PSITRDVSGEGVQQALLKLIEGTMASVP-PQGG-RKHPNQDFLQIDTTNILFICGGAFAG 256
Query: 306 LEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRF 365
LEK I R + S IGFGA V++ + LT+ ++ DL+ +GLIPE +GR
Sbjct: 257 LEKVIENRTEASGIGFGASVKSK-KQRSLTEVFT------EIEPEDLIKFGLIPELVGRM 309
Query: 366 PILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTG 425
P++ +L+ L+ED LVQ+L EPKNAL +QY K+ +M V L AL+ IA+KA+A+ TG
Sbjct: 310 PVVTALAELSEDALVQILTEPKNALVKQYSKLLAMEGVDLEIRPAALKAIARKALARKTG 369
Query: 426 ARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
ARGLR++LE L MF++P TS+V V+VD+ + P
Sbjct: 370 ARGLRSILEQSLIGTMFDLP----NTSNVEKVVVDESTIEENKPP 410
>gi|363890988|ref|ZP_09318282.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Eubacteriaceae
bacterium CM5]
gi|361962755|gb|EHL15864.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Eubacteriaceae
bacterium CM5]
Length = 417
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 191/401 (47%), Positives = 262/401 (65%), Gaps = 56/401 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLP PKEI LD+++IGQE AKK ++YNHYKRIYH+
Sbjct: 60 DLPKPKEIKDFLDDYIIGQEAAKKV---------------LSVSLYNHYKRIYHAD---- 100
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
K GN EL+KSN+LL+GPTGSGKTLLA+TLA+I++VP
Sbjct: 101 ----------------KKGNKT-------ELQKSNILLLGPTGSGKTLLAQTLAKIMDVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT LT+AGYVGED E++L KL+ AADF++E AQ+GIVYIDE+DKI K+E+ +
Sbjct: 138 FAIADATTLTEAGYVGEDVENILLKLIQAADFNIEKAQKGIVYIDEIDKITRKSENVSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGT+ NVP P G RKHP + I IDT +I+FI GGAF G+++
Sbjct: 198 RDVSGEGVQQALLKIIEGTLANVP-PQGG-RKHPNQELIQIDTTNIMFIVGGAFEGIDEI 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ +R + +GFG+ V + D + + ++V + DL+ YGLIPEF+GR PI+V
Sbjct: 256 VRKRLGKNVVGFGSKVISK-------DTMKIGEIYKNVQTEDLLKYGLIPEFVGRLPIVV 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SL L+E+ LV++L EPKN+L +Q+KK+F ++NV L D+AL +AKKA+ + TGARGL
Sbjct: 309 SLDPLDEEALVKILKEPKNSLVKQFKKLFELDNVILEIDDEALTEVAKKAIERKTGARGL 368
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE + + M++IP V VL++K+ + P
Sbjct: 369 RSILEETMMDIMYDIP----SRDDVEKVLINKDCIDKKAQP 405
>gi|428206836|ref|YP_007091189.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Chroococcidiopsis thermalis PCC 7203]
gi|428008757|gb|AFY87320.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Chroococcidiopsis thermalis PCC 7203]
Length = 446
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 196/398 (49%), Positives = 259/398 (65%), Gaps = 44/398 (11%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P P+EI LDE VIGQ+ AKK AVYNHYKR+
Sbjct: 78 IPKPREIKAHLDEHVIGQDEAKKV---------------LSVAVYNHYKRL--------- 113
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
S++ S SG E+ IVEL+KSN+LL+GPTG GKTLLA+TLA+I++VPF
Sbjct: 114 --------SLVQSKNSSGKAGAED--IVELQKSNILLIGPTGCGKTLLAQTLAQILDVPF 163
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E++L +LL AD DVE AQRGI+YIDE+DKI K+E+ + R
Sbjct: 164 AVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITR 223
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKMLEGTV NVP P G RKHP D I IDT +ILFICGGAFVGLEK +
Sbjct: 224 DVSGEGVQQALLKMLEGTVANVP-PQGG-RKHPYQDCIQIDTSNILFICGGAFVGLEKVV 281
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R SIGF P GL+ T+ +L ++ DLV +G+IPEFIGR P++
Sbjct: 282 EQRIGKKSIGFIQP------GEGLSREKRTADILVHLEPDDLVKFGMIPEFIGRVPMVAV 335
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
+ L+E+ LV +L +PK+AL +QY+K+ M+NV+L F +ALR IA++A + TGAR LR
Sbjct: 336 VEPLDEEALVAILTQPKSALVKQYQKLLKMDNVQLEFKPEALRAIAQEAYRRKTGARALR 395
Query: 431 ALLENILTEAMFEIPETK-IGTSSVNAVLVDKEAVGSV 467
++E ++ E M+E+P K + +V +V+K + +
Sbjct: 396 GIVEELMLELMYELPSRKDLTRCAVTREMVEKRSTAEL 433
>gi|425453824|ref|ZP_18833577.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9807]
gi|389800129|emb|CCI20439.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9807]
Length = 444
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 195/411 (47%), Positives = 261/411 (63%), Gaps = 50/411 (12%)
Query: 58 ENGNRNRNSEGNI---DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCA 114
E N+ R+ + +P P+EI K LD++VIGQ AKK A
Sbjct: 59 ERPNKRRSGQNKTTWEQIPKPREIKKHLDDYVIGQNEAKKV---------------LSVA 103
Query: 115 VYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGS 174
VYNHYKR+ QK +G + E+ +EL+KSN+LL+GPTGS
Sbjct: 104 VYNHYKRLKDIQTQK------------------AGGGSPEDS--IELQKSNILLIGPTGS 143
Query: 175 GKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYI 234
GKTLLA+TLA+I++VPF + DAT LT+AGYVGED E++L +LL AD DVE AQRGI+YI
Sbjct: 144 GKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGIIYI 203
Query: 235 DEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTK 293
DE+DKI K+E+ + RDVSGEGVQQALLKMLEGT+ NVP P G RKHP D I IDT
Sbjct: 204 DEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVP-PQGG-RKHPYQDCIQIDTS 261
Query: 294 DILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLV 353
+ILFICGGAFVGL+K I +R S+GF P + V + LL+ + DLV
Sbjct: 262 NILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDSQANKDK-----VAAGLLKQMTPDDLV 316
Query: 354 AYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALR 413
+G+IPEF+GR PIL +LS L+E+ L+ +L +P+NAL +QY+K+ M+NV+L F DA+
Sbjct: 317 KFGMIPEFVGRIPILAALSPLDEEALIAILTQPRNALVKQYQKLLKMDNVQLEFKSDAVL 376
Query: 414 LIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
IA++A + TGAR LR ++E ++ + M+E+P K V L+ +E V
Sbjct: 377 AIAQEAYRRKTGARALRGIVEELMLDVMYELPSRK----DVKRCLITREMV 423
>gi|390449293|ref|ZP_10234902.1| ATP-dependent protease ATP-binding subunit ClpX [Nitratireductor
aquibiodomus RA22]
gi|389664398|gb|EIM75893.1| ATP-dependent protease ATP-binding subunit ClpX [Nitratireductor
aquibiodomus RA22]
Length = 424
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 193/400 (48%), Positives = 261/400 (65%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI + LD++VIGQ AK+ AV+NHYKR+ H+S +
Sbjct: 65 VPTPQEIIEVLDDYVIGQGHAKRV---------------LSVAVHNHYKRLAHASKNAD- 108
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 109 ---------------------------VELAKSNILLIGPTGCGKTLLAQTLARIIDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL++ I
Sbjct: 202 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTANILFICGGAFAGLDRII 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S+R + +SIGFGA V + + T L V+ DL+ +GLIPEF+GR P+L +
Sbjct: 260 SDRGRKTSIGFGATVAS-------PEDRPTGELFRQVEPEDLLKFGLIPEFVGRLPVLAT 312
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E LVQ+L EPKNAL +QY+++F M NV+L F ++AL IA+KA+ + TGARGLR
Sbjct: 313 LEDLDEAALVQILSEPKNALVKQYQRLFDMENVELTFHENALAAIARKAIERKTGARGLR 372
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+++E IL + MFE+P V V++ E V P
Sbjct: 373 SIMEAILLDTMFELP----ALEGVQEVVISDEVVAGNARP 408
>gi|319898777|ref|YP_004158870.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
clarridgeiae 73]
gi|319402741|emb|CBI76288.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Bartonella
clarridgeiae 73]
Length = 398
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 198/411 (48%), Positives = 265/411 (64%), Gaps = 68/411 (16%)
Query: 36 EIMGGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKS 95
E+ IR++ +S+GI++ +PTP+EI LD++VIGQ AK+
Sbjct: 18 ELCMDIIREENKSSGIKARD---------------GVPTPQEILTVLDDYVIGQRHAKRV 62
Query: 96 HIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEN 155
AV+NHYKR+ H S KS N
Sbjct: 63 ---------------LSVAVHNHYKRLAHQS--------------------KS------N 81
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
D VEL KSN+LL+GPTG GKT LA+TLARI++VPFT+ DAT LT+AGYVGED E+++ K
Sbjct: 82 D--VELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILK 139
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
LL +AD++VE AQRGIVYIDEVDKI KA++ + RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 140 LLQSADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVP- 198
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
P G RKHP+ + + +DT +ILFICGGAF GLE+ IS R + +SIGF A V+A
Sbjct: 199 PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSAAVKA------- 250
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
D + ++ DL+ +GLIPEFIGR P++ +L L+ LVQ+L +PKNAL +QY
Sbjct: 251 PDERRVGEIFRDLEPEDLIKFGLIPEFIGRLPVIATLEDLDICALVQILSQPKNALVKQY 310
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP 445
+++F M NV L F +DALR+IAKKA+ + TGARGLR+++E IL + MFE+P
Sbjct: 311 QRLFEMENVHLVFHEDALRVIAKKAIERKTGARGLRSIMERILLDTMFELP 361
>gi|220932329|ref|YP_002509237.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Halothermothrix orenii H 168]
gi|254763850|sp|B8CY73.1|CLPX_HALOH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|219993639|gb|ACL70242.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Halothermothrix orenii H 168]
Length = 416
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 193/385 (50%), Positives = 261/385 (67%), Gaps = 54/385 (14%)
Query: 63 NRNSEGNID-LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKR 121
N + E N++ +P P+EI K LD++V+GQERAKKS AVYNHYKR
Sbjct: 51 NDDVEFNLNNIPKPREIKKILDQYVVGQERAKKS---------------LSVAVYNHYKR 95
Query: 122 IYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAK 181
+ N +++ D+ VEL+KSN+L++GPTG GKTLLA+
Sbjct: 96 V---------------------------NSDMKIDD-VELQKSNILMVGPTGCGKTLLAQ 127
Query: 182 TLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV 241
TLARI++VPF ITDAT+LT+AGYVGED E++L KL+ AAD+D+E A+RGI+YIDE+DKI
Sbjct: 128 TLARILDVPFAITDATSLTEAGYVGEDVENILLKLIQAADYDIEKAERGIIYIDEIDKIA 187
Query: 242 -KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICG 300
K+E+ + RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFI G
Sbjct: 188 RKSENPSITRDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTTNILFIAG 245
Query: 301 GAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPE 360
GAF GL+K I R + +GFGA +++ L+ + DL+ YGLIPE
Sbjct: 246 GAFDGLDKIIKSRIDNKVMGFGADIKSKTEEN-------VGETLKYILPEDLLRYGLIPE 298
Query: 361 FIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAM 420
FIGR P++V+L+ L E+ LV++L EP+NAL +QYKK F M+NV+L FT +AL IA+KA+
Sbjct: 299 FIGRLPVIVTLNELVEEDLVKILTEPRNALVKQYKKFFEMDNVELEFTPEALTAIAQKAL 358
Query: 421 AKNTGARGLRALLENILTEAMFEIP 445
+NTGARGLRA++E + + M+++P
Sbjct: 359 ERNTGARGLRAVVEEAILDIMYDLP 383
>gi|307250530|ref|ZP_07532474.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306857423|gb|EFM89535.1| ATP-dependent Clp protease ATP-binding subunit clpX [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
Length = 419
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 198/402 (49%), Positives = 257/402 (63%), Gaps = 50/402 (12%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
++PTP EI LDE+VIGQE AKK AVYNHYKR+ ++
Sbjct: 63 NVPTPHEINAHLDEYVIGQEHAKKV---------------LSVAVYNHYKRLRNAL---- 103
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
SG K N VEL KSN+LL+GPTGSGKTLLA+TLAR +NVP
Sbjct: 104 -------------SGHKETNG-------VELGKSNILLIGPTGSGKTLLAETLARRLNVP 143
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LTQAGYVGED E+V+ KLL DFD E A+RGIV+IDE+DKI K+ES +
Sbjct: 144 FAVADATTLTQAGYVGEDVENVIQKLLMKCDFDAEQAERGIVFIDEIDKITRKSESPSIT 203
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGTV N I G RKHP+G+ IP+ T ILFICGGAF GL+K
Sbjct: 204 RDVSGEGVQQALLKLIEGTVAN--INPQGSRKHPKGETIPVYTSKILFICGGAFAGLDKI 261
Query: 310 ISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
+ R + IGFGA ++ + LT+ L + V+ DLV +GLIPE IGR P++
Sbjct: 262 VEARSNKQGGIGFGAELKKDKEREDLTE------LFKQVEPEDLVKFGLIPELIGRLPVV 315
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
L L+E+ L+Q+L EPKNA+ +QY+ +F M V+L FT DAL IA+K++++ TGARG
Sbjct: 316 TPLQELDEEALIQILTEPKNAIIKQYQALFQMEGVELKFTKDALIAIAQKSISRKTGARG 375
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++EN+L + M+ +P K +V V + K V + D P
Sbjct: 376 LRSIVENLLLDTMYNLPTLK-AEKNVQKVTIGKGCVENGDKP 416
>gi|15596999|ref|NP_250493.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PAO1]
gi|116049752|ref|YP_791441.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa UCBPP-PA14]
gi|152987449|ref|YP_001348853.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PA7]
gi|218892244|ref|YP_002441111.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa LESB58]
gi|254234896|ref|ZP_04928219.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa C3719]
gi|254240195|ref|ZP_04933517.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 2192]
gi|296389807|ref|ZP_06879282.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PAb1]
gi|313110499|ref|ZP_07796384.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 39016]
gi|355644078|ref|ZP_09053618.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
sp. 2_1_26]
gi|386059305|ref|YP_005975827.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa M18]
gi|386065647|ref|YP_005980951.1| ATP-dependent protease ATP-binding subunit [Pseudomonas aeruginosa
NCGM2.S1]
gi|392984725|ref|YP_006483312.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa DK2]
gi|416854316|ref|ZP_11910794.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 138244]
gi|416872416|ref|ZP_11916654.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 152504]
gi|418585583|ref|ZP_13149631.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa MPAO1/P1]
gi|418591337|ref|ZP_13155236.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa MPAO1/P2]
gi|419755332|ref|ZP_14281687.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PADK2_CF510]
gi|421154508|ref|ZP_15614013.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa ATCC 14886]
gi|421161185|ref|ZP_15620151.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa ATCC 25324]
gi|421168557|ref|ZP_15626633.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa ATCC 700888]
gi|421175071|ref|ZP_15632768.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa CI27]
gi|421181101|ref|ZP_15638619.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa E2]
gi|421516443|ref|ZP_15963129.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PAO579]
gi|21263483|sp|Q9I2U0.1|CLPX_PSEAE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|122258863|sp|Q02KU5.1|CLPX_PSEAB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214805|sp|A6V718.1|CLPX_PSEA7 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706595|sp|B7VB75.1|CLPX_PSEA8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|9947785|gb|AAG05191.1|AE004606_5 ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PAO1]
gi|115584973|gb|ABJ10988.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa UCBPP-PA14]
gi|126166827|gb|EAZ52338.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa C3719]
gi|126193573|gb|EAZ57636.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 2192]
gi|150962607|gb|ABR84632.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
aeruginosa PA7]
gi|218772470|emb|CAW28252.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa LESB58]
gi|310882886|gb|EFQ41480.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 39016]
gi|334844151|gb|EGM22729.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 138244]
gi|334845945|gb|EGM24503.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 152504]
gi|347305611|gb|AEO75725.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa M18]
gi|348034206|dbj|BAK89566.1| ATP-dependent protease ATP-binding subunit [Pseudomonas aeruginosa
NCGM2.S1]
gi|354829406|gb|EHF13481.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
sp. 2_1_26]
gi|375044272|gb|EHS36881.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa MPAO1/P1]
gi|375049877|gb|EHS42365.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa MPAO1/P2]
gi|384398029|gb|EIE44437.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PADK2_CF510]
gi|392320230|gb|AFM65610.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa DK2]
gi|404350171|gb|EJZ76508.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PAO579]
gi|404521909|gb|EKA32463.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa ATCC 14886]
gi|404529366|gb|EKA39412.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa ATCC 700888]
gi|404533024|gb|EKA42877.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa CI27]
gi|404540647|gb|EKA50044.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa ATCC 25324]
gi|404544329|gb|EKA53518.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa E2]
gi|453047165|gb|EME94880.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PA21_ST175]
Length = 426
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 195/400 (48%), Positives = 256/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPAPKEIRTILDQYVIGQERAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + D+I EL KSN+L++GPTGSGKTLLA+TLAR++NVPF
Sbjct: 101 ------------------NQRDKKDDI-ELGKSNILMIGPTGSGKTLLAETLARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLE+ I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFAGLERVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + +A + V+ DLV +GLIPEF+GR P++ +
Sbjct: 260 QNRSARGGIGFNAEVRSQEMGKKVGEA------FKEVEPEDLVKFGLIPEFVGRLPVIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +A+KA+ + TGARGLR
Sbjct: 314 LDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRPDALKAVARKALERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE IL + M+EIP + V+ V++D+ + P
Sbjct: 374 SILEGILLDTMYEIPSQQ----DVSKVVIDESVIDGSSQP 409
>gi|425472439|ref|ZP_18851280.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9701]
gi|389881466|emb|CCI37972.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9701]
Length = 444
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 195/411 (47%), Positives = 261/411 (63%), Gaps = 50/411 (12%)
Query: 58 ENGNRNRNSEGNI---DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCA 114
E N+ R+ + +P P+EI K LD++VIGQ AKK A
Sbjct: 59 ERPNKRRSGQNKTTWEQIPKPREIKKYLDDYVIGQNEAKKV---------------LSVA 103
Query: 115 VYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGS 174
VYNHYKR+ QK SG ++ +EL+KSN+LL+GPTGS
Sbjct: 104 VYNHYKRLKDIQTQK-----------------ASGGSP---EDSIELQKSNILLIGPTGS 143
Query: 175 GKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYI 234
GKTLLA+TLA+I++VPF + DAT LT+AGYVGED E++L +LL AD DVE AQRGI+YI
Sbjct: 144 GKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGIIYI 203
Query: 235 DEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTK 293
DE+DKI K+E+ + RDVSGEGVQQALLKMLEGT+ NVP P G RKHP D I IDT
Sbjct: 204 DEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVP-PQGG-RKHPYQDCIQIDTS 261
Query: 294 DILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLV 353
+ILFICGGAFVGL+K I +R S+GF P G + V + LL+ + DLV
Sbjct: 262 NILFICGGAFVGLDKVIDQRLGKKSMGFIQP-----GDGQASKDKVAAGLLKQMTPDDLV 316
Query: 354 AYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALR 413
+G+IPEF+GR P+L +LS L+E+ L+ +L +P+NAL +QY+K+ M+NV+L F DA+
Sbjct: 317 KFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNALVKQYQKLLKMDNVQLEFKSDAVL 376
Query: 414 LIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
IA++A + TGAR LR ++E ++ + M+E+P K V L+ +E V
Sbjct: 377 AIAQEAYRRKTGARALRGIVEELMLDVMYELPSRK----DVKRCLITREMV 423
>gi|124266486|ref|YP_001020490.1| ATP-dependent protease ATP-binding subunit ClpX [Methylibium
petroleiphilum PM1]
gi|166214784|sp|A2SFB6.1|CLPX_METPP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|124259261|gb|ABM94255.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylibium
petroleiphilum PM1]
Length = 423
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 191/376 (50%), Positives = 248/376 (65%), Gaps = 50/376 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLP P EI LD++VIGQE AK++ AVYNHYKR+ H
Sbjct: 65 DLPVPGEIKASLDQYVIGQEPAKRT---------------LAVAVYNHYKRLKH------ 103
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+ G G K E VEL KSN+LL+GPTGSGKTLLA+TLAR++NVP
Sbjct: 104 ----------VQGVGKK---------EDVELAKSNILLIGPTGSGKTLLAQTLARLLNVP 144
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT LT+AGYVGED E+++ KLL +++VE AQRGIVYIDE+DKI KA++ +
Sbjct: 145 FVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVERAQRGIVYIDEIDKISRKADNPSIT 204
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGT+ +VP P G RKHP D + IDT +ILFICGGAF GLEK
Sbjct: 205 RDVSGEGVQQALLKLVEGTMASVP-PQGG-RKHPNQDFLQIDTTNILFICGGAFDGLEKV 262
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R + S IGFGA V++ S + V+ DL+ +GLIPE +GR P++
Sbjct: 263 IQNRSEKSGIGFGASVQSKTERK-------VSEVFREVEPEDLIKFGLIPELVGRLPVVA 315
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L ED +VQ+L EPKNAL +QY+K+F+M+ V+L AL IA+KA+A+ TGARGL
Sbjct: 316 TLGELTEDAMVQILTEPKNALVKQYQKLFAMDGVELEIRPSALTAIAQKALARKTGARGL 375
Query: 430 RALLENILTEAMFEIP 445
R+++E+ L + MF++P
Sbjct: 376 RSIMEHSLMDTMFDLP 391
>gi|359783253|ref|ZP_09286469.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
psychrotolerans L19]
gi|359368904|gb|EHK69479.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
psychrotolerans L19]
Length = 426
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 255/401 (63%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQ+RAK+ AVYNHYKR+
Sbjct: 65 LPAPKEISAILDQYVIGQQRAKRV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
E + VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 ----------------------EKKDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFAGLEKVI 259
Query: 311 SERR-QDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
R + IGF A VR+ + ++ L + DLV +GLIPEF+GR P++
Sbjct: 260 QNRSTKGGGIGFNAEVRSQELGKKIGES------LRDAEPEDLVKFGLIPEFVGRLPVIA 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+E L+Q+L EPKNAL +QY K+F M +V L F DAL+ +A+KA+ + TGARGL
Sbjct: 314 TLDELDEPALMQILTEPKNALTKQYAKLFEMEDVDLEFRPDALKAVARKALERKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE IL E M+EIP K V+ V++D+ + P
Sbjct: 374 RSILEGILLETMYEIPSQK----EVSKVVIDESVIDGSSQP 410
>gi|238759261|ref|ZP_04620428.1| ATP-dependent Clp protease ATP-binding subunit clpX [Yersinia
aldovae ATCC 35236]
gi|238791432|ref|ZP_04635070.1| ATP-dependent Clp protease ATP-binding subunit clpX [Yersinia
intermedia ATCC 29909]
gi|238702548|gb|EEP95098.1| ATP-dependent Clp protease ATP-binding subunit clpX [Yersinia
aldovae ATCC 35236]
gi|238729048|gb|EEQ20564.1| ATP-dependent Clp protease ATP-binding subunit clpX [Yersinia
intermedia ATCC 29909]
Length = 423
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 197/412 (47%), Positives = 261/412 (63%), Gaps = 62/412 (15%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
+R R+S LPTP EI LD++VIGQE AKK AVYNHYK
Sbjct: 58 HRERSS-----LPTPHEIRHHLDDYVIGQEPAKKV---------------LAVAVYNHYK 97
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
R+ N + +EL KSN+LL+GPTGSGKTLLA
Sbjct: 98 RLR----------------------------NGDTSNGIELGKSNILLIGPTGSGKTLLA 129
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+TLAR ++VPFT+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI
Sbjct: 130 ETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKI 189
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K+++ + RDVSGEGVQQALLK++EGT+ VP P G RKHP+ + + +DT ILFIC
Sbjct: 190 SRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQVDTSKILFIC 247
Query: 300 GGAFVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLI 358
GGAF GL+K I +R + IGFGA V+ G ++ LL + DL+ +GLI
Sbjct: 248 GGAFAGLDKVIGQRINTGTGIGFGATVK------GKSEKATEGELLSQAEPEDLIKFGLI 301
Query: 359 PEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKK 418
PEFIGR P++ +LS L+ED L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKK
Sbjct: 302 PEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFNLEGVELEFRDEALTAIAKK 361
Query: 419 AMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
AMA+ TGARGLR+++E L + M+++P SV V+VD+ + AP
Sbjct: 362 AMARKTGARGLRSIVEGALLDTMYDLP----SMDSVEKVVVDESVIAGQSAP 409
>gi|326432268|gb|EGD77838.1| ATP-dependent protease ATP-binding subunit [Salpingoeca sp. ATCC
50818]
Length = 603
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 195/399 (48%), Positives = 251/399 (62%), Gaps = 52/399 (13%)
Query: 73 PTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELV 132
P PKEI L+++VIGQ+ AKK+ AVYNHYKR+
Sbjct: 225 PKPKEILDNLNDYVIGQDHAKKT---------------LAVAVYNHYKRV---------- 259
Query: 133 SDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFT 192
+ +K + + +D V+ EKSN+LL GPTGSGKTLLA+TLA I+NVPF
Sbjct: 260 ----------SANLKEASSSAAHD--VQFEKSNILLAGPTGSGKTLLARTLANILNVPFA 307
Query: 193 ITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNGRD 251
I+D T LTQAGYVGED ESVLY+LL A DFD++ AQRGIV++DE+DKI + S RD
Sbjct: 308 ISDCTTLTQAGYVGEDVESVLYRLLQACDFDLDRAQRGIVFLDEIDKISSISGSGVATRD 367
Query: 252 VSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTIS 311
VSGEGVQQALLK+LEGTVVNV P+ G RK PRG+ I IDT +ILFI GAF GLE I
Sbjct: 368 VSGEGVQQALLKLLEGTVVNV--PEKGGRKSPRGETIQIDTSNILFIASGAFNGLEDLIK 425
Query: 312 ERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSL 371
+R + SIGF A ++ + V +L V + DLV +GLIPEF+GRFP +V L
Sbjct: 426 KREEKGSIGFNAALKTPNKP-------VDGQMLRKVQADDLVKFGLIPEFVGRFPCVVHL 478
Query: 372 SALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRA 431
AL E LV+VL EPKN+L QY+ +F M N L F+ +LR AKKA+ + TGARGLR
Sbjct: 479 EALTESDLVRVLTEPKNSLVSQYRALFRMENTDLVFSSSSLRAFAKKALDRKTGARGLRT 538
Query: 432 LLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+E +L + M+++P + I T V++ + V +AP
Sbjct: 539 FIEQVLLQPMYDVPGSDIAT-----VMITDKTVLEDEAP 572
>gi|407939905|ref|YP_006855546.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax sp.
KKS102]
gi|407897699|gb|AFU46908.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax sp.
KKS102]
Length = 421
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 196/405 (48%), Positives = 259/405 (63%), Gaps = 55/405 (13%)
Query: 67 EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSS 126
EG DLPTP EI LD +VIGQ+ AK++ AVYNHYKR+ H
Sbjct: 60 EGRSDLPTPVEIKANLDNYVIGQDVAKRT---------------LAVAVYNHYKRLRHK- 103
Query: 127 LQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARI 186
D + D VEL KSN+LL+GPTGSGKTLLA+TLAR+
Sbjct: 104 -------DKAHKDD------------------VELSKSNILLIGPTGSGKTLLAQTLARM 138
Query: 187 VNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAES 245
++VPF + DAT LT+AGYVGED E+++ KLL + +++VE AQRGIVYIDE+DKI K+++
Sbjct: 139 LDVPFVMADATTLTEAGYVGEDVENIVQKLLQSCNYEVERAQRGIVYIDEIDKISRKSDN 198
Query: 246 RNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVG 305
+ RDVSGEGVQQALLK++EGT+ +VP P G RKHP D + IDT +ILFICGGAF G
Sbjct: 199 PSITRDVSGEGVQQALLKLIEGTMASVP-PQGG-RKHPNQDFLQIDTTNILFICGGAFAG 256
Query: 306 LEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRF 365
LEK I R + S IGFGA V++ + LT+ ++ DL+ +GLIPE +GR
Sbjct: 257 LEKVIENRTEASGIGFGASVKSK-KQRSLTEVFT------EIEPEDLIKFGLIPELVGRM 309
Query: 366 PILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTG 425
P++ +L+ L+ED LVQ+L EPKNAL +QY K+ +M V L AL+ IA+KA+A+ TG
Sbjct: 310 PVVTALAELSEDALVQILTEPKNALVKQYSKLLAMEGVDLEIRPAALKAIARKALARKTG 369
Query: 426 ARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
ARGLR++LE L MF++P TS+V V+VD+ + P
Sbjct: 370 ARGLRSILEQALIGTMFDLP----NTSNVEKVVVDESTIEENKPP 410
>gi|103488220|ref|YP_617781.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingopyxis
alaskensis RB2256]
gi|123379515|sp|Q1GPH4.1|CLPX_SPHAL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|98978297|gb|ABF54448.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sphingopyxis
alaskensis RB2256]
Length = 423
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 196/394 (49%), Positives = 260/394 (65%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP EIC+ LD +VIGQ +AK+ AV+NHYKR+ +S
Sbjct: 64 VPTPLEICQHLDAYVIGQNKAKRV---------------LSVAVHNHYKRLANS------ 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G G E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 103 -----------GRG-----------EDVELAKSNILLVGPTGSGKTLLAQTLARFLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL ++D++VE AQRGIVYIDE+DKI KAE+ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIILKLLQSSDYNVEKAQRGIVYIDEIDKISRKAENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT +ILFI GGAF GLEK I
Sbjct: 201 DVSGEGVQQALLKLMEGTTASVP-PQGG-RKHPQQEFLQVDTTNILFIAGGAFAGLEKII 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R Q SIGFGA V D +L+ ++ DL+ +GLIPEF+GR P++ +
Sbjct: 259 GDRLQGKSIGFGAHVAG-------PDERRAGEVLKQIEPEDLLKFGLIPEFVGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ D LV++L EPKNAL +QYKK+F + V L FTDDAL +AKKA+ + TGARGLR
Sbjct: 312 LEDLDVDALVKILGEPKNALVKQYKKLFDLEEVALTFTDDALVAVAKKAIERKTGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E IL + MF++P+ + V ++VDK+ V
Sbjct: 372 SIVEAILLDTMFDLPD----LTDVVEIVVDKDVV 401
>gi|255528526|ref|ZP_05395308.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
carboxidivorans P7]
gi|255507784|gb|EET84242.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
carboxidivorans P7]
Length = 429
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 193/395 (48%), Positives = 263/395 (66%), Gaps = 59/395 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ AKKS AVYNHYKRI
Sbjct: 60 LPKPIEIKNYLDQYVIGQNEAKKS---------------LAVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N N ND+ VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF
Sbjct: 96 ------------------NSNANNDD-VELQKSNILLLGPTGSGKTLLAQTLAKFLNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ +D+D+E A+RGIVYIDE+DKI K+E+ + R
Sbjct: 137 AIADATTLTEAGYVGEDVENILLKLIQNSDYDIERAERGIVYIDEIDKIARKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV +VP P G RKHP + I I+T +ILFICGGAF G+++ I
Sbjct: 197 DVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQINTTNILFICGGAFDGVDRII 254
Query: 311 SERRQDSSIGFGAPVRA-NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
R + S++GFGA +++ N + G LL+ + GDL+ +GLIPEF+GR PI+V
Sbjct: 255 ESRTRVSTLGFGAEIQSKNEKDIG--------KLLQEIMPGDLLKFGLIPEFVGRLPIVV 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+++ L+ +L EPKNAL +QYK++F ++NV+L F ++AL IA +A+ ++TGARGL
Sbjct: 307 TLDALDKNALISILKEPKNALVKQYKRLFEIDNVELDFEEEALEAIANEAVKRDTGARGL 366
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
RA++E + + MFEIP + V+++K+ +
Sbjct: 367 RAIIEETMKDIMFEIP----SKEEIAKVVINKDTI 397
>gi|295096775|emb|CBK85865.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length = 424
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 260/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S R + S IGFGA V+A ++ LL V+ DL+ +GLIPEFIGR P++
Sbjct: 259 SHRVETGSGIGFGATVKAT------SEKPNEGQLLAQVEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+ED L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKKAMA+ TGARGL
Sbjct: 313 TLNELSEDALIQILKEPKNALTKQYQALFNLEGVELEFRDEALDAIAKKAMARKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P + V V++D+ +G P
Sbjct: 373 RSIVEAALLDTMYDLPSME----DVEKVVIDESVIGGQSKP 409
>gi|117926915|ref|YP_867532.1| ATP-dependent protease ATP-binding subunit ClpX [Magnetococcus
marinus MC-1]
gi|166214782|sp|A0LDT3.1|CLPX_MAGSM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|117610671|gb|ABK46126.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Magnetococcus
marinus MC-1]
Length = 420
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 197/395 (49%), Positives = 264/395 (66%), Gaps = 57/395 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP EI LD++VIGQ+ AK++ AVYNHYKR L
Sbjct: 62 VPTPMEIKSTLDDYVIGQDNAKRT---------------LAVAVYNHYKR---------L 97
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
S+ D VE+ KSNVL++GPTGSGKTLLA+TLAR+++VPF
Sbjct: 98 ESNDTSAD-------------------VEISKSNVLMIGPTGSGKTLLAQTLARLLDVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TITDAT LT+AGYVGED E+++ +LL AAD DVE AQRGIV+IDE+DKI K+++ + R
Sbjct: 139 TITDATTLTEAGYVGEDVENIILRLLQAADNDVEKAQRGIVFIDEIDKISRKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +IL ICGGAF GLEK I
Sbjct: 199 DVSGEGVQQALLKIIEGTVASVP-PQGG-RKHPQQEYLQVDTTNILVICGGAFNGLEKVI 256
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR N + + + LL+ ++ DL+A+GLIPEF+GR P++
Sbjct: 257 EKRSSKHHGIGFGATVRKNSKEESV------NVLLKELEPEDLLAFGLIPEFVGRLPVVA 310
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+++ LV++L EPKNAL +QY+K+ M NVKL FTD AL +A++A+ + TGARGL
Sbjct: 311 TLEELSKEALVRILTEPKNALVKQYQKLLEMENVKLTFTDGALEALAQRAIERKTGARGL 370
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
RALLE+ L + MFEIP + V V++++E V
Sbjct: 371 RALLESTLLDIMFEIPSKQ----GVREVVINREVV 401
>gi|347525691|ref|YP_004832439.1| ATP-dependent protease ATP-binding subunit [Lactobacillus ruminis
ATCC 27782]
gi|345284650|gb|AEN78503.1| ATP-dependent protease ATP-binding subunit [Lactobacillus ruminis
ATCC 27782]
Length = 410
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 258/401 (64%), Gaps = 56/401 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+ TPKEI K L+++VIGQ AKK+ AVYNHYKRI ++ L+ E
Sbjct: 60 DVLTPKEIVKTLNQYVIGQNEAKKT---------------LAVAVYNHYKRI-NAMLEDE 103
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+E EL+KSN+ L+GPTGSGKT LA++LA+++NVP
Sbjct: 104 -------------------------NEDTELQKSNICLIGPTGSGKTYLAQSLAKLLNVP 138
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT LT+AGYVGED E++L KLL AD+DVE AQRGI+YIDE+DKI K+E+ +
Sbjct: 139 FAIADATTLTEAGYVGEDVENILLKLLQNADYDVERAQRGIIYIDEIDKIAKKSENVSIT 198
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQ+LLK+LEGT+ NVP P G RKHP+ + I IDT +ILFI GGAF G+EK
Sbjct: 199 RDVSGEGVQQSLLKILEGTIANVP-PQGG-RKHPQQEFIQIDTTNILFIVGGAFDGIEKI 256
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ R D +IGFG R N + SL++ + DL+ +GLIPEFIGR PI+
Sbjct: 257 VKNRLGDKTIGFGVEARKNYDE--------SKSLMQQIIPEDLLKFGLIPEFIGRLPIIT 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L ED LV++L EPKNAL +QY K+ S ++ +L F DDALR +A+ A+ +NTGARGL
Sbjct: 309 ALEKLTEDDLVRILTEPKNALVKQYAKLLSFDDCELVFEDDALREVARLAIKRNTGARGL 368
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E + + MF++P K + V++ KE V P
Sbjct: 369 RSIIEATMRDVMFDVPSDK----DIARVVITKETVDGTGKP 405
>gi|296184878|ref|ZP_06853289.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
carboxidivorans P7]
gi|296050660|gb|EFG90083.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
carboxidivorans P7]
Length = 429
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 193/395 (48%), Positives = 263/395 (66%), Gaps = 59/395 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ AKKS AVYNHYKRI
Sbjct: 60 LPKPIEIKNYLDQYVIGQNEAKKS---------------LAVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N N ND+ VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF
Sbjct: 96 ------------------NSNANNDD-VELQKSNILLLGPTGSGKTLLAQTLAKFLNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ +D+D+E A+RGIVYIDE+DKI K+E+ + R
Sbjct: 137 AIADATTLTEAGYVGEDVENILLKLIQNSDYDIERAERGIVYIDEIDKIARKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV +VP P G RKHP + I I+T +ILFICGGAF G+++ I
Sbjct: 197 DVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQINTTNILFICGGAFDGVDRII 254
Query: 311 SERRQDSSIGFGAPVRA-NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
R + S++GFGA +++ N + G LL+ + GDL+ +GLIPEF+GR PI+V
Sbjct: 255 ESRTRVSTLGFGAEIQSKNEKDIG--------KLLQEIMPGDLLKFGLIPEFVGRLPIVV 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+++ L+ +L EPKNAL +QYK++F ++NV+L F ++AL IA +A+ ++TGARGL
Sbjct: 307 TLDALDKNALISILKEPKNALVKQYKRLFEIDNVELDFEEEALEAIANEAVKRDTGARGL 366
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
RA++E + + MFEIP + V+++K+ +
Sbjct: 367 RAIIEETMKDIMFEIP----SKEEIAKVVINKDTI 397
>gi|417001198|ref|ZP_11941112.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Veillonella
parvula ACS-068-V-Sch12]
gi|333975681|gb|EGL76560.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Veillonella
parvula ACS-068-V-Sch12]
Length = 417
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 192/401 (47%), Positives = 262/401 (65%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTP+EI LDE+VIGQ+ AK I AVYNHYKR+
Sbjct: 59 ELPTPREIKAHLDEYVIGQDDAK---------------ISLAVAVYNHYKRLQTD----- 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
NV +D VEL+K+NVL +GPTGSGKTLLA+TLA+++ VP
Sbjct: 99 ---------------------NVVDD--VELQKANVLFIGPTGSGKTLLAQTLAKMLEVP 135
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L K++ AAD+D+ A+RGI+YIDE+DKI K+E+ +
Sbjct: 136 FAIADATSLTEAGYVGEDVENILLKIIQAADYDIARAERGIIYIDEIDKIARKSENPSIT 195
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + + IDT +ILFICGGAF G++K
Sbjct: 196 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPNQEMLQIDTTNILFICGGAFDGMDKV 253
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I++R ++GFGA V+ S++L+ V DL+ +GLIPEFIGR P++V
Sbjct: 254 ITKRTAKKTLGFGADVQRKEERN-------ISAILKDVVPEDLLKFGLIPEFIGRLPVMV 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+ D L+Q+L +PKNAL +QY+K+ S++ V+L FT+DAL IA +A+ + TGARGL
Sbjct: 307 TLDQLDRDALIQILTKPKNALTKQYEKILSLDGVELTFTEDALEEIADEALQRKTGARGL 366
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA++E ++ MFE+P V +V++E+V S P
Sbjct: 367 RAIIEKVMKRVMFEVP----SMPEVTKCIVNRESVLSTGEP 403
>gi|411001021|gb|AFV98752.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Candidatus
Snodgrassella sp. T3_2_35043]
gi|411001073|gb|AFV98801.1| ClpX [Candidatus Snodgrassella sp. TA7_36335]
Length = 420
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 199/411 (48%), Positives = 258/411 (62%), Gaps = 53/411 (12%)
Query: 55 SETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCA 114
S TENG + +G LPTP EI LD++VIGQE AKKS A
Sbjct: 47 SSTENGMPAADGDGQEKLPTPAEIVANLDQYVIGQETAKKS---------------LAVA 91
Query: 115 VYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGS 174
VYNHYKR L G + G VEL KSN+LL+GPTGS
Sbjct: 92 VYNHYKR--------------------LRLGKEEGQ--------VELSKSNILLIGPTGS 123
Query: 175 GKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYI 234
GKTLLA+TLAR ++VPF + DAT LT+AGYVGED E ++ KLL DFDV+ AQ+GIVYI
Sbjct: 124 GKTLLAQTLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLGKCDFDVQKAQKGIVYI 183
Query: 235 DEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTK 293
DE+DKI K+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP + I +DT
Sbjct: 184 DEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPNQEFINVDTT 241
Query: 294 DILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLV 353
+ILFICGGAF GLEK I +R + IGFGA V + + S L ++V+ DL+
Sbjct: 242 NILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSKDENTNV------SELFQTVEPEDLI 295
Query: 354 AYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALR 413
+GLIPE IGR P++ +L+ L+ED L+ +L EPKNAL +Q++ +F+M V+L ALR
Sbjct: 296 KFGLIPELIGRLPVIATLTELDEDALINILTEPKNALIKQFQALFAMEGVELQVQPSALR 355
Query: 414 LIAKKAMAKNTGARGLRALLENILTEAMFEIPE-TKIGTSSVNAVLVDKEA 463
IAK AMA+ TGARGLR+++E L M+ +P+ + VN ++DK A
Sbjct: 356 AIAKLAMARKTGARGLRSIVEKALLNTMYALPDLNDVKKVVVNQDVIDKGA 406
>gi|429099392|ref|ZP_19161498.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
dublinensis 582]
gi|426285732|emb|CCJ87611.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
dublinensis 582]
Length = 428
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 259/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRSHLDDYVIGQEKAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + N VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 ------------------NGDTSNG--VELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ R + S IGFGA V+ G + LL V+ DL+ +GLIPEFIGR P++
Sbjct: 259 ANRVETGSGIGFGATVK------GKSQKATEGELLSQVEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+ED L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKKAM++ TGARGL
Sbjct: 313 TLNELSEDALIQILKEPKNALTKQYQALFNLEGVELEFRDEALEAIAKKAMSRKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L E M+++P + V V++D+ + P
Sbjct: 373 RSIVEAALLETMYDLPSME----EVEKVVIDESVIAGQSEP 409
>gi|422292887|gb|EKU20188.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Nannochloropsis gaditana CCMP526]
Length = 376
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 186/376 (49%), Positives = 256/376 (68%), Gaps = 56/376 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P P+EIC LD++VIGQ AK+ AV+NHYKR+ +
Sbjct: 19 VPAPREICNVLDDYVIGQATAKRV---------------LSVAVHNHYKRLNN------- 56
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+G + +EL+KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 57 ----------------TGKSD------IELQKSNILLIGPTGCGKTLLAQTLARILDVPF 94
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K+E+ + R
Sbjct: 95 TMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITR 154
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 155 DVSGEGVQQALLKLMEGTVAAVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 212
Query: 311 SERRQDSSIGFGAPVR-ANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S+R + S++GFGA VR R G + + ++ DL+ +GLIPEF+GR P++
Sbjct: 213 SQRGKGSAMGFGADVRNVEERNVG--------EVFKDLEPEDLLKFGLIPEFVGRLPVIA 264
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+ED L+ +L +PKNAL +QY+++F + N +L FT+DAL IAK+A+A+ TGARGL
Sbjct: 265 TLEDLDEDALITILTQPKNALVKQYQRLFELENAQLTFTEDALSAIAKRAIARKTGARGL 324
Query: 430 RALLENILTEAMFEIP 445
R++LE+IL + MFE+P
Sbjct: 325 RSILEDILLDTMFELP 340
>gi|403379307|ref|ZP_10921364.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Paenibacillus
sp. JC66]
Length = 418
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 201/401 (50%), Positives = 257/401 (64%), Gaps = 58/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI LD +VIGQ++AKKS AVYNHYKRI
Sbjct: 60 DIPKPKEIRNILDSYVIGQDQAKKS---------------LSVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N + D+ VEL+KSN+LL+GPTGSGKTLLA+TLA+I+NVP
Sbjct: 97 -------------------NSQSKADD-VELQKSNILLLGPTGSGKTLLAQTLAKILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ A+D+DVE A+RGI+YIDE+DK+ K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQASDYDVEKAERGIIYIDEIDKVARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFICGGAF GLE
Sbjct: 197 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFDGLESI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R IGFGA GL L L V DL+ +GLIPEFIGR P +
Sbjct: 255 IKRRIGKKVIGFGA--------DGLKADLKAGEYLSMVLPEDLLKFGLIPEFIGRLPNIS 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+E L+++L EPKNAL +QY+K+ ++NV+L F +AL IA++A+ +NTGARGL
Sbjct: 307 TLEPLDEAALIRILSEPKNALVKQYQKLLELDNVELEFQQEALEAIAQEAIKRNTGARGL 366
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA+LE I+ + M++IP + V + LV KE V AP
Sbjct: 367 RAILEKIMLDVMYDIP----SRTDVKSCLVTKEVVQEKIAP 403
>gi|358067640|ref|ZP_09154118.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Johnsonella
ignava ATCC 51276]
gi|356694293|gb|EHI55956.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Johnsonella
ignava ATCC 51276]
Length = 431
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 198/387 (51%), Positives = 259/387 (66%), Gaps = 53/387 (13%)
Query: 70 IDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQK 129
I+LP P++I LDE+VIGQ+ AKK IL AVYNHYKRI +++
Sbjct: 62 INLPKPRQIKSYLDEYVIGQDNAKK-----IL----------SVAVYNHYKRIINAT--- 103
Query: 130 ELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNV 189
+ +ND V+++KSNVLL+GPTGSGKT LA+TLA I+NV
Sbjct: 104 ----------------------STDND--VKIQKSNVLLLGPTGSGKTYLAQTLAGILNV 139
Query: 190 PFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNN 248
PF I DAT LT+AGYVGED E++L KL+ AAD DV A+ GIVYIDE+DKI K +E+ +
Sbjct: 140 PFAIADATTLTEAGYVGEDVENILLKLIQAADDDVRRAEHGIVYIDEIDKIAKKSENVSI 199
Query: 249 GRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEK 308
RDVSGEGVQQALLK+LEGT+ +VP P G RKHP + I IDT +ILFICGGAF GLEK
Sbjct: 200 TRDVSGEGVQQALLKLLEGTIASVP-PQGG-RKHPHQELIQIDTSNILFICGGAFDGLEK 257
Query: 309 TISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I R SIGF + + L L + V DL+ YGLIPEFIGR PI
Sbjct: 258 IIERRLGKGSIGFNSEIT-------LRHTHTADELFKQVMPQDLIKYGLIPEFIGRVPIT 310
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
VSLS L+ED LV++L+EPKNAL +QYKK+F M++VKL FTD+A++ +A+ A+ + GARG
Sbjct: 311 VSLSMLDEDSLVRILVEPKNALVKQYKKLFEMDDVKLEFTDEAVKKVAELAIERKIGARG 370
Query: 429 LRALLENILTEAMFEIP-ETKIGTSSV 454
LR+++EN++ + M++IP ++ IG ++
Sbjct: 371 LRSIMENVMMDLMYDIPSDSNIGICTI 397
>gi|92114167|ref|YP_574095.1| ATP-dependent protease ATP-binding subunit ClpX [Chromohalobacter
salexigens DSM 3043]
gi|122419775|sp|Q1QVW2.1|CLPX_CHRSD RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91797257|gb|ABE59396.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Chromohalobacter salexigens DSM 3043]
Length = 426
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 194/408 (47%), Positives = 266/408 (65%), Gaps = 57/408 (13%)
Query: 65 NSEGNID-LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIY 123
++EG+ + LP P+EI LD++VIGQ+RAK+ AVYNHYKR
Sbjct: 57 DAEGDEERLPAPREIRNTLDDYVIGQDRAKRV---------------LSVAVYNHYKR-- 99
Query: 124 HSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTL 183
L + VKS E VEL KSN+LL+GPTGSGKTLLA+T+
Sbjct: 100 ------------------LRADVKS--------EDVELGKSNILLIGPTGSGKTLLAETM 133
Query: 184 ARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-K 242
AR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K
Sbjct: 134 ARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAQRGIVYIDEIDKISRK 193
Query: 243 AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGA 302
+++ + RDVSGEGVQQALLK++EGT + IP G RKHP+ + + +DT ++LFI GGA
Sbjct: 194 SDNPSITRDVSGEGVQQALLKLIEGTTAS--IPPQGGRKHPQQEFLQVDTSNMLFIVGGA 251
Query: 303 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFI 362
F GLEK I +R + IGF A V++ + D +L V+ DLV +GLIPEF+
Sbjct: 252 FAGLEKVIRDRVEKGGIGFNAEVKSKDSEKAMGD------ILAGVEPEDLVKFGLIPEFV 305
Query: 363 GRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAK 422
GR P++ +L+ L+E+ L+Q+L EPKN+L +QY +F+M V+L F +DALR +A KAMA+
Sbjct: 306 GRVPVIATLTELSEEALIQILTEPKNSLIKQYVHLFAMEGVELEFREDALRAVAHKAMAR 365
Query: 423 NTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
NTGARGLR++LE++L + M+E+P + V V++D + P
Sbjct: 366 NTGARGLRSILESVLLDTMYEVPSLE----DVTKVVIDASVITGDSEP 409
>gi|271499598|ref|YP_003332623.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dickeya
dadantii Ech586]
gi|270343153|gb|ACZ75918.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dickeya
dadantii Ech586]
Length = 424
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 195/402 (48%), Positives = 262/402 (65%), Gaps = 59/402 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI + LD++VIGQE+AKK AVYNHYKR+ +S
Sbjct: 64 LPTPHEIRRHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLRNS------ 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+++ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 103 ----------------------DSNNGVELGKSNILLIGPTGSGKTLLAETLARFLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQDS--SIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
E+R D+ IGF A V+ G++ LL V+ GDL+ +GLIPEFIGR P++
Sbjct: 259 -EQRTDTGRGIGFNATVK------GVSQKATEGELLGQVEPGDLIKFGLIPEFIGRLPVV 311
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+ED L+Q+L EPKNAL +QY+ +F + +L F D+AL IAKKAMA+ TGARG
Sbjct: 312 ATLKELDEDALIQILREPKNALTKQYQALFKLEGAELEFRDEALTAIAKKAMARKTGARG 371
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E L E M+++P + +V+ V+VD+ + P
Sbjct: 372 LRSIVEAALLETMYDLPSLE----NVDKVVVDESVISEQTEP 409
>gi|257784420|ref|YP_003179637.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Atopobium
parvulum DSM 20469]
gi|257472927|gb|ACV51046.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Atopobium
parvulum DSM 20469]
Length = 432
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 205/426 (48%), Positives = 266/426 (62%), Gaps = 57/426 (13%)
Query: 47 ESNGIESESETENGNRNRNSEGNI-DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDML 105
ES G + ESE E + E I DLPTP EI L ++V+GQE AK++
Sbjct: 54 ESLGFDEESEIET----HSDEPVIKDLPTPHEIYDELSQYVMGQEDAKRA---------- 99
Query: 106 VYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSN 165
AVYNHY+RI + + + E E VE+ KSN
Sbjct: 100 -----MSVAVYNHYRRILSGNDEPQ-----------------------EGKEDVEIAKSN 131
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL+GPTG+GKTLLA+TLAR + VPF I DAT LT+AGYVGED E++L KL+ AAD DVE
Sbjct: 132 ILLLGPTGTGKTLLAQTLARFLEVPFAIADATTLTEAGYVGEDVENILLKLITAADGDVE 191
Query: 226 AAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPR 284
AQ GIVYIDE+DKI KAE+ + RDVSGEGVQQALLK+LEGTV NV P G RKHP+
Sbjct: 192 RAQVGIVYIDEIDKIARKAENLSITRDVSGEGVQQALLKILEGTVANV--PPTGGRKHPQ 249
Query: 285 GDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLL 344
+ I IDT +ILFICGGAFVGL+K +++R IGF + V N++ S L+
Sbjct: 250 QELIHIDTTNILFICGGAFVGLDKIVADRIGKKGIGFNSDVAKNVKED-------ESELI 302
Query: 345 ESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVK 404
V DL +G+IPE +GR P++ S L E+ L+ +L +PKNAL +QY++MF + V
Sbjct: 303 AKVMPQDLHKFGMIPELLGRIPVITSTRELGEEDLMSILTDPKNALTKQYRRMFELEGVD 362
Query: 405 LHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
L FT+D+LR IAKKA+A+ TGARGLRA+ E+ L E MF++P + V+V E+V
Sbjct: 363 LEFTEDSLREIAKKALARGTGARGLRAICESTLQEIMFDLP----SDLDITKVVVTPESV 418
Query: 465 GSVDAP 470
G +AP
Sbjct: 419 GGDNAP 424
>gi|160898087|ref|YP_001563669.1| ATP-dependent protease ATP-binding subunit ClpX [Delftia
acidovorans SPH-1]
gi|333915638|ref|YP_004489370.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Delftia sp.
Cs1-4]
gi|238687212|sp|A9C1U9.1|CLPX_DELAS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|160363671|gb|ABX35284.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Delftia
acidovorans SPH-1]
gi|333745838|gb|AEF91015.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Delftia sp.
Cs1-4]
Length = 420
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 195/405 (48%), Positives = 259/405 (63%), Gaps = 55/405 (13%)
Query: 67 EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSS 126
+G DLPTP EI LD +VIGQ+ K++ AVYNHYKR+ H
Sbjct: 59 DGRGDLPTPAEIKANLDNYVIGQDLPKRT---------------LAVAVYNHYKRLRHKD 103
Query: 127 LQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARI 186
K+G DEI EL KSN+LL+GPTGSGKTLLA+TLAR+
Sbjct: 104 --------------------KAGK-----DEI-ELAKSNILLIGPTGSGKTLLAQTLARM 137
Query: 187 VNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAES 245
+NVPF + DAT LT+AGYVGED E+++ KLL + ++DVE AQRGIVYIDE+DKI K+++
Sbjct: 138 LNVPFVMADATTLTEAGYVGEDVENIIQKLLQSCEYDVERAQRGIVYIDEIDKISRKSDN 197
Query: 246 RNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVG 305
+ RDVSGEGVQQALLK++EGT+ +VP P G RKHP D + IDT +ILFICGGAF G
Sbjct: 198 PSITRDVSGEGVQQALLKLIEGTMASVP-PQGG-RKHPNQDFLQIDTTNILFICGGAFAG 255
Query: 306 LEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRF 365
LEK I R + S IGFGA V++ + S + + ++ DL+ +G+IPE +GR
Sbjct: 256 LEKVIENRTEASGIGFGATVKSKKQRS-------ISEVFQEIEPEDLIKFGIIPELVGRM 308
Query: 366 PILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTG 425
P++ +L+ L ED LVQ+L EPKNAL +QY K+ +M V+L AL+ IA+KA+A+ TG
Sbjct: 309 PVVTALAELGEDALVQILTEPKNALVKQYSKLLAMEGVELEIRPAALKAIARKALARKTG 368
Query: 426 ARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
ARGLR++LE L M+E+P +V V+VD+ + AP
Sbjct: 369 ARGLRSILEQSLIGTMYELP----NADNVEKVVVDESTIEDGKAP 409
>gi|260222836|emb|CBA32802.1| ATP-dependent Clp protease ATP-binding subunit clpX [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 421
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 191/407 (46%), Positives = 257/407 (63%), Gaps = 55/407 (13%)
Query: 65 NSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYH 124
N EG DLPTP +I LD +VIGQE AK++ AVYNHYKR+ H
Sbjct: 58 NKEGRSDLPTPADIKANLDNYVIGQEPAKRT---------------LAVAVYNHYKRLKH 102
Query: 125 SSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLA 184
K+ + VEL KSN+LL+GPTGSGKTLLA+TLA
Sbjct: 103 KEKAKK--------------------------DDVELAKSNILLIGPTGSGKTLLAQTLA 136
Query: 185 RIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KA 243
R+++VPF + DAT LT+AGYVGED E+++ KLL + ++DVE AQRGIVYIDE+DKI K+
Sbjct: 137 RMLDVPFVMADATTLTEAGYVGEDVENIVLKLLQSCNYDVERAQRGIVYIDEIDKISRKS 196
Query: 244 ESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAF 303
++ + RDVSGEGVQQALLK++EGT+ +VP P G RKHP D + IDT +ILFICGGAF
Sbjct: 197 DNPSITRDVSGEGVQQALLKLIEGTMASVP-PQGG-RKHPNQDFVQIDTTNILFICGGAF 254
Query: 304 VGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIG 363
GLEK I R + S IGFGA V++ + + + + V+ DL+ +GLIPE +G
Sbjct: 255 AGLEKVIESRTESSGIGFGAAVKSKQQRA-------LTEVFKEVEPEDLIKFGLIPELVG 307
Query: 364 RFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKN 423
R P++ +L+ L E+ LVQ+L EPKNAL +QY K+ +M +L AL+ IAK+A+ +
Sbjct: 308 RMPVVATLAELTEEALVQILTEPKNALVKQYAKLLAMEGTELEIRPAALKAIAKRALIRK 367
Query: 424 TGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
TGARGLR++LE L + M+E+P +V V+VD+ + P
Sbjct: 368 TGARGLRSILEQSLIDTMYELP----NAGNVEKVVVDESTIEENKPP 410
>gi|334123166|ref|ZP_08497195.1| ATP-dependent Clp protease ATP-binding subunit [Enterobacter
hormaechei ATCC 49162]
gi|449472610|ref|XP_004153646.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Cucumis sativus]
gi|333391040|gb|EGK62163.1| ATP-dependent Clp protease ATP-binding subunit [Enterobacter
hormaechei ATCC 49162]
Length = 424
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 260/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S R + S IGFGA V+A ++ LL V+ DL+ +GLIPEFIGR P++
Sbjct: 259 SHRVETGSGIGFGATVKAT------SEKPNEGQLLAQVEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+ED L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKKAMA+ TGARGL
Sbjct: 313 TLNELSEDALIQILKEPKNALTKQYQALFNLEGVELEFRDEALDAIAKKAMARKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P + V V++D+ +G P
Sbjct: 373 RSIVEAALLDTMYDLPSME----DVEKVVIDESVIGGQTKP 409
>gi|307942063|ref|ZP_07657414.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Roseibium sp.
TrichSKD4]
gi|307774349|gb|EFO33559.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Roseibium sp.
TrichSKD4]
Length = 431
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 198/402 (49%), Positives = 262/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI LD++VIGQ AKK AV+NHYKR+ HSS
Sbjct: 73 IPTPQEIRDVLDDYVIGQGSAKKV---------------LSVAVHNHYKRLNHSSKN--- 114
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL GPTG GKTLLA+TLARI++VPF
Sbjct: 115 -----------------------ND--VELAKSNILLAGPTGCGKTLLAQTLARILDVPF 149
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A+D++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 150 TMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEVDKISRKSDNPSITR 209
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 210 DVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 267
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
++R +SIGF A V+A + R G L ++ DL+ +GLIPEF+GR P++
Sbjct: 268 ADRGTQTSIGFKANVQAPEDRRVG---------ELFSVMEPEDLLKFGLIPEFVGRLPVI 318
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+ED LV +L+EPKNAL +QY+++F M V+L F ++ALR IA+KA+ + TGARG
Sbjct: 319 ATLEDLDEDALVTILVEPKNALVKQYQRLFEMEQVELTFHEEALRAIARKAIERKTGARG 378
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR++LE IL + M+E+P G V V++ E V P
Sbjct: 379 LRSILEAILLDTMYELP----GLKGVKEVVISPEVVAGQSRP 416
>gi|146295916|ref|YP_001179687.1| ATP-dependent protease ATP-binding subunit ClpX
[Caldicellulosiruptor saccharolyticus DSM 8903]
gi|166214768|sp|A4XHW1.1|CLPX_CALS8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|145409492|gb|ABP66496.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 433
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 193/400 (48%), Positives = 261/400 (65%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTPKEI + LD++V+GQ+ AKK IL AVYNHYKRIY+
Sbjct: 61 LPTPKEIKEFLDQYVVGQDHAKK-----IL----------SVAVYNHYKRIYYHD----- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N ++D VE++KSN+L++GPTGSGKT LA+TLA+++NVPF
Sbjct: 101 --------------------NRKDD--VEIQKSNILMLGPTGSGKTYLAQTLAKMLNVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L +L+ AD+D+E A+RGIVYIDE+DKI K+++ + R
Sbjct: 139 AIADATTLTEAGYVGEDVENILLRLIQNADYDIERAERGIVYIDEIDKIARKSDNPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGT+ +VP P G RKHP + I IDT +ILFICGGAF G+EK I
Sbjct: 199 DVSGEGVQQALLKILEGTIASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFEGIEKII 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R + ++GF A +L + DL+ +G+IPEFIGR PI+V+
Sbjct: 257 ERRIGEKTLGFNA-------KIESKKEKKIGDILRQIMPQDLLKFGMIPEFIGRVPIIVT 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L AL+++ L+++L EPKNAL +QY+K+F+M+ V+L F +AL IA KA+ +NTGARGLR
Sbjct: 310 LDALDKEALIKILTEPKNALVKQYQKLFAMDGVELEFEKEALEAIADKAIERNTGARGLR 369
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
A++E I+ + MFEIP + V++ K AV D P
Sbjct: 370 AIMEEIMLDVMFEIP----SNDKIEKVIITKAAVLKEDKP 405
>gi|351729534|ref|ZP_08947225.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax radicis
N35]
Length = 421
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 196/405 (48%), Positives = 259/405 (63%), Gaps = 55/405 (13%)
Query: 67 EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSS 126
EG DLPTP EI LD +VIGQ+ AK++ AVYNHYKR+ H
Sbjct: 60 EGRSDLPTPVEIKTNLDNYVIGQDVAKRT---------------LAVAVYNHYKRLRHK- 103
Query: 127 LQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARI 186
D + D VEL KSN+LL+GPTGSGKTLLA+TLAR+
Sbjct: 104 -------DKAHKDD------------------VELSKSNILLIGPTGSGKTLLAQTLARM 138
Query: 187 VNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAES 245
++VPF + DAT LT+AGYVGED E+++ KLL + +++VE AQRGIVYIDE+DKI K+++
Sbjct: 139 LDVPFVMADATTLTEAGYVGEDVENIVQKLLQSCNYEVERAQRGIVYIDEIDKISRKSDN 198
Query: 246 RNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVG 305
+ RDVSGEGVQQALLK++EGT+ +VP P G RKHP D + IDT +ILFICGGAF G
Sbjct: 199 PSITRDVSGEGVQQALLKLIEGTMASVP-PQGG-RKHPNQDFLQIDTTNILFICGGAFAG 256
Query: 306 LEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRF 365
LEK I R + S IGFGA V++ + LT+ ++ DL+ +GLIPE +GR
Sbjct: 257 LEKVIENRTEASGIGFGASVKSK-KQRSLTEVFT------EIEPEDLIKFGLIPELVGRM 309
Query: 366 PILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTG 425
P++ +L+ L+ED LVQ+L EPKNAL +QY K+ +M V L AL+ IA+KA+A+ TG
Sbjct: 310 PVVTALAELSEDALVQILTEPKNALVKQYSKLLAMEGVDLEIRPAALKAIARKALARKTG 369
Query: 426 ARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
ARGLR++LE L MF++P TS+V V+VD+ + P
Sbjct: 370 ARGLRSILEQSLIGTMFDLP----NTSNVEKVVVDESTIEENKPP 410
>gi|304391392|ref|ZP_07373334.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ahrensia sp.
R2A130]
gi|303295621|gb|EFL89979.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ahrensia sp.
R2A130]
Length = 427
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 195/395 (49%), Positives = 264/395 (66%), Gaps = 61/395 (15%)
Query: 73 PTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELV 132
PTP+EI L+++VIGQ AK+ AV+NHYKR+ H++
Sbjct: 67 PTPQEILDVLNDYVIGQPHAKRV---------------LSVAVHNHYKRLNHAA------ 105
Query: 133 SDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFT 192
EN++ VEL KSN++L+GPTG GKTLLA+TLARI++VPFT
Sbjct: 106 ---------------------ENED-VELAKSNIMLIGPTGCGKTLLAQTLARILDVPFT 143
Query: 193 ITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRD 251
+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDEVDKI K+++ + RD
Sbjct: 144 MADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEVDKITRKSDNPSITRD 203
Query: 252 VSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTIS 311
VSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFI GGAF GL+K IS
Sbjct: 204 VSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFIAGGAFAGLDKIIS 261
Query: 312 ERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + + IGFGA V + + +TG L AL + DL+ +GLIPEF+GR P+L
Sbjct: 262 DRGRQTGIGFGANVESPEDRKTGELFKAL---------EPEDLLRFGLIPEFVGRIPVLA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+ED LVQ+L EPKNAL +QY+++F M V L F +DALR IA+KA+ + TGARGL
Sbjct: 313 TLEDLDEDSLVQILSEPKNALIKQYQRLFEMEEVTLSFQEDALRAIAQKAITRKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
R+++E IL + MFE+P + V V++ +E V
Sbjct: 373 RSIIEGILLDTMFELPSLE----GVQEVVISEEVV 403
>gi|313894820|ref|ZP_07828380.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Selenomonas
sp. oral taxon 137 str. F0430]
gi|402301973|ref|ZP_10821094.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Selenomonas
sp. FOBRC9]
gi|312976501|gb|EFR41956.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Selenomonas
sp. oral taxon 137 str. F0430]
gi|400381258|gb|EJP34061.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Selenomonas
sp. FOBRC9]
Length = 421
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 258/401 (64%), Gaps = 56/401 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI LD++VIGQ+ AKKS AVYNHYKRI
Sbjct: 60 DVPKPKEIRHILDQYVIGQDEAKKS---------------LSVAVYNHYKRINA------ 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
G G +ND+ VEL KSN+L++GPTGSGKTLLA+TLARI+NVP
Sbjct: 99 ------------GHG--------KNDD-VELRKSNILMLGPTGSGKTLLAQTLARILNVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E AQRGI+Y+DE+DKI K+E+ +
Sbjct: 138 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAQRGIIYVDEIDKIARKSENPSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQ LLK+LEGT +VP P G RKHP+ + + IDT +ILFICGGAF G+E+
Sbjct: 198 RDVSGEGVQQGLLKILEGTTASVP-PQGG-RKHPQQELLQIDTTNILFICGGAFDGIEEI 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R +GFGA VR+ R L V DL+ GLIPEFIGR P++V
Sbjct: 256 IESRLGKKQMGFGAEVRSKKRVS-------VGESLSKVIPEDLMKNGLIPEFIGRLPVVV 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+LS+L+E +V++L EPKNAL +Q++++ M+ V+L F DAL LIAK+A+ TGARGL
Sbjct: 309 TLSSLDEAAMVRILTEPKNALVKQFQRLLDMDGVRLTFEQDALHLIAKEALTHKTGARGL 368
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E I+ M+E+P + V A V KE V + P
Sbjct: 369 RSIIEGIMRNVMYEVPSIQ----GVTACQVTKEVVANHSDP 405
>gi|68535618|ref|YP_250323.1| ATP-dependent protease ATP-binding subunit ClpX [Corynebacterium
jeikeium K411]
gi|68263217|emb|CAI36705.1| ATP-dependent Clp protease, ATP-binding subunit [Corynebacterium
jeikeium K411]
Length = 424
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 195/382 (51%), Positives = 250/382 (65%), Gaps = 47/382 (12%)
Query: 66 SEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHS 125
+E + LP P I + LD +VIGQ+ AK++ AVYNHYKRI
Sbjct: 53 AESSAKLPKPAAIAEFLDSYVIGQDEAKRT---------------LAVAVYNHYKRI--- 94
Query: 126 SLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLAR 185
Q E +S +D+ VEL KSN+L++GPTGSGKT LA++LAR
Sbjct: 95 --QVE----------------ESNAAARRSDDEVELAKSNILMLGPTGSGKTYLAQSLAR 136
Query: 186 IVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAE 244
+++VPF I DAT+LT+AGYVGED E++L KLL AADFDV AQRGI+Y+DEVDKI K+E
Sbjct: 137 MLDVPFAIADATSLTEAGYVGEDVENILLKLLQAADFDVAKAQRGIIYVDEVDKISRKSE 196
Query: 245 SRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFV 304
+ + RDVSGEGVQQALLK+LEGTV VP P G RKHP + I DTK++LFI GAF
Sbjct: 197 NPSITRDVSGEGVQQALLKILEGTVAAVP-PQGG-RKHPNQEFIQFDTKNVLFIVAGAFS 254
Query: 305 GLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGR 364
GLEK ISERR +GFGA + A + + V+ DLV +GLIPE IGR
Sbjct: 255 GLEKVISERRGKKGLGFGAEISAKSEE--------DPNPFQFVEPEDLVKFGLIPELIGR 306
Query: 365 FPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNT 424
P+L + L+ED LV+VL EPKN+L RQY+++F M+ V+L F D+ALR IA+KA+A+ T
Sbjct: 307 LPVLTHVGHLDEDALVRVLTEPKNSLVRQYQRLFDMDGVRLTFEDEALREIAQKALARET 366
Query: 425 GARGLRALLENILTEAMFEIPE 446
GARGLR+++E +L MF IPE
Sbjct: 367 GARGLRSIMETLLLPTMFAIPE 388
>gi|393762607|ref|ZP_10351234.1| ATP-dependent protease ATP-binding subunit [Alishewanella agri
BL06]
gi|392606842|gb|EIW89726.1| ATP-dependent protease ATP-binding subunit [Alishewanella agri
BL06]
Length = 426
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 194/417 (46%), Positives = 270/417 (64%), Gaps = 60/417 (14%)
Query: 56 ETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAV 115
E ++ + R++E LPTP++I K LD++VIGQE AKK AV
Sbjct: 53 EIKDISPKRDTE---KLPTPRDIRKHLDDYVIGQEHAKKV---------------LAVAV 94
Query: 116 YNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSG 175
YNHYKR+ +++ + VEL KSN+LL+GPTGSG
Sbjct: 95 YNHYKRLR----------------------------SIQQKQDVELGKSNILLIGPTGSG 126
Query: 176 KTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYID 235
KTLLA+TLAR+++VPFT+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYID
Sbjct: 127 KTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYID 186
Query: 236 EVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKD 294
E+DKI K+++ + RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT
Sbjct: 187 EIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTSK 244
Query: 295 ILFICGGAFVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLV 353
ILFICGGAF GL+K I +R + S IGFGA V++ + LT++ V+ DLV
Sbjct: 245 ILFICGGAFAGLDKVIEQRLAKGSGIGFGAEVKSKESSRSLTES------FRDVEPEDLV 298
Query: 354 AYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALR 413
YGLIPEFIGR P++ +L+ L+ L+Q+L +PKNAL +Q+ +F+M V L F DDAL+
Sbjct: 299 KYGLIPEFIGRLPVVATLTELDLAALMQILSQPKNALIKQFAALFAMEEVDLEFRDDALK 358
Query: 414 LIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
IA+KAM + TGARGLR+++E +L + M+E+P + V+ V++D+ + P
Sbjct: 359 AIAQKAMDRKTGARGLRSIVEGVLLDTMYELPSMQ----DVSKVVIDETVIRGESQP 411
>gi|442771952|gb|AGC72624.1| ATP-dependent Clp protease ATP-binding subunit ClpX [uncultured
bacterium A1Q1_fos_1134]
Length = 421
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 192/399 (48%), Positives = 254/399 (63%), Gaps = 55/399 (13%)
Query: 67 EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSS 126
E DLPTP EI LD +VIGQE AK++ AVYNHYKR+ H
Sbjct: 60 EAKTDLPTPSEIKANLDNYVIGQEAAKRT---------------LAVAVYNHYKRLRH-- 102
Query: 127 LQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARI 186
D D VEL KSN+LL+GPTGSGKTLLA+TLAR+
Sbjct: 103 ------KDKAAKDD------------------VELSKSNILLIGPTGSGKTLLAQTLARM 138
Query: 187 VNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAES 245
++VPF + DAT LT+AGYVGED E+++ KLL + +++VE AQRGIVYIDE+DKI K+++
Sbjct: 139 LDVPFVMADATTLTEAGYVGEDVENIIQKLLQSCNYEVERAQRGIVYIDEIDKISRKSDN 198
Query: 246 RNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVG 305
+ RDVSGEGVQQALLK++EGT+ +VP P G RKHP D + IDT +ILFICGGAF G
Sbjct: 199 PSITRDVSGEGVQQALLKLIEGTMASVP-PQGG-RKHPNQDFLQIDTTNILFICGGAFAG 256
Query: 306 LEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRF 365
LEK I R + S IGFGA V++ + S + + ++ DL+ +GLIPE +GR
Sbjct: 257 LEKVIENRTEASGIGFGAAVKSKKQRS-------LSEVFQEIEPEDLIKFGLIPELVGRM 309
Query: 366 PILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTG 425
P++ +L+ L ED LVQ+L EPKNAL +QY K+ +M +L AL+ IA+KA+A+ TG
Sbjct: 310 PVVAALAELGEDALVQILTEPKNALVKQYNKLLAMEGAELEIRPAALKAIARKALARKTG 369
Query: 426 ARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
ARGLR++LE L MF++P S+V V+VD+ +
Sbjct: 370 ARGLRSILEQALINTMFDLP----NASNVEKVVVDESTI 404
>gi|363895294|ref|ZP_09322292.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Eubacteriaceae
bacterium ACC19a]
gi|361957732|gb|EHL11037.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Eubacteriaceae
bacterium ACC19a]
Length = 417
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 193/401 (48%), Positives = 263/401 (65%), Gaps = 56/401 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLP PKEI LD+++IGQE AKK ++YNHYKRIYH
Sbjct: 60 DLPKPKEIKDFLDDYIIGQEAAKKV---------------LSVSLYNHYKRIYH------ 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
VD K GN EL+KSN+LL+GPTGSGKTLLA+TLA+I++VP
Sbjct: 99 -------VD-------KKGNKT-------ELQKSNILLLGPTGSGKTLLAQTLAKIMDVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT LT+AGYVGED E++L KL+ AADF++E AQ+GIVYIDE+DKI K+E+ +
Sbjct: 138 FAIADATTLTEAGYVGEDVENILLKLIQAADFNIEKAQKGIVYIDEIDKITRKSENVSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGT+ NVP P G RKHP + I IDT +I+FI GGAF G+++
Sbjct: 198 RDVSGEGVQQALLKIIEGTLANVP-PQGG-RKHPNQELIQIDTTNIMFIVGGAFEGIDEI 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ +R + +GFG+ V + D + + ++V + DL+ YGLIPEF+GR PI+V
Sbjct: 256 VRKRLGKNVVGFGSKVVSK-------DTMKIGEIYKNVQTEDLLKYGLIPEFVGRLPIVV 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SL L+E+ LV++L EPKN+L +Q+KK+F ++NV L D+AL +AKKA+ + TGARGL
Sbjct: 309 SLDPLDEEALVKILKEPKNSLVKQFKKLFELDNVILEIDDEALTEVAKKAIERKTGARGL 368
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE + + M++IP V VL++K+ + P
Sbjct: 369 RSILEETMMDIMYDIP----SRDDVEKVLINKDCIDKKAQP 405
>gi|125975223|ref|YP_001039133.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
thermocellum ATCC 27405]
gi|256003115|ref|ZP_05428107.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
thermocellum DSM 2360]
gi|281419197|ref|ZP_06250213.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
thermocellum JW20]
gi|385777707|ref|YP_005686872.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
thermocellum DSM 1313]
gi|419722740|ref|ZP_14249877.1| ATP-dependent Clp protease ATP-binding subunit clpX [Clostridium
thermocellum AD2]
gi|419726241|ref|ZP_14253264.1| ATP-dependent Clp protease ATP-binding subunit clpX [Clostridium
thermocellum YS]
gi|166214772|sp|A3DJ11.1|CLPX_CLOTH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|125715448|gb|ABN53940.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
thermocellum ATCC 27405]
gi|255992806|gb|EEU02896.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
thermocellum DSM 2360]
gi|281407063|gb|EFB37325.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
thermocellum JW20]
gi|316939387|gb|ADU73421.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
thermocellum DSM 1313]
gi|380770293|gb|EIC04190.1| ATP-dependent Clp protease ATP-binding subunit clpX [Clostridium
thermocellum YS]
gi|380781120|gb|EIC10781.1| ATP-dependent Clp protease ATP-binding subunit clpX [Clostridium
thermocellum AD2]
Length = 431
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 190/401 (47%), Positives = 263/401 (65%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P P EI + LD++V+GQ+ AKK+ AVYNHYKRI
Sbjct: 60 DIPKPSEIKEILDQYVVGQDTAKKA---------------LAVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
S VK + VEL+KSN++++GPTGSGKTLLA+TLARI+NVP
Sbjct: 97 ------------NSDVKGSD--------VELQKSNIVMLGPTGSGKTLLAQTLARILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E A++GI+YIDE+DKI K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIERAEKGIIYIDEIDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ +VP P G RKHP + I IDT +ILFICGGAF G+EK
Sbjct: 197 RDVSGEGVQQALLKILEGTIASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFDGIEKI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R S+GFGA + + + +L+++ DL+ +GLIPEF+GR P++V
Sbjct: 255 IQNRIGKKSMGFGAKIESPKKAN-------VGEILKNILPQDLLKFGLIPEFVGRLPVIV 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L +L+ + LV++L EPKNAL +QY+K+F M++V L F +A+ IA KA+ +NTGARGL
Sbjct: 308 TLHSLDREALVKILTEPKNALVKQYQKLFEMDDVILEFEKEAIEAIADKAIERNTGARGL 367
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA+LE I+ + M++IP +V ++ K+ V + P
Sbjct: 368 RAILEEIMLDVMYDIP----SQENVEKCIITKDTVEKMVPP 404
>gi|417120998|ref|ZP_11970452.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0246]
gi|386148728|gb|EIG95163.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0246]
Length = 424
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 259/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N +N VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDNSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S R + S IGFGA V+A +D LL V+ DL+ +GLIPEFIGR P++
Sbjct: 259 SHRVETGSGIGFGATVKAK------SDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY+ +F++ V L F D+AL IAKKAMA+ TGARGL
Sbjct: 313 TLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P + + V++D+ + P
Sbjct: 373 RSIVEAALLDTMYDLPSME----DIEKVVIDESVIDGQSKP 409
>gi|156935009|ref|YP_001438925.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii ATCC BAA-894]
gi|389841945|ref|YP_006344029.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii ES15]
gi|417791994|ref|ZP_12439406.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii E899]
gi|424798414|ref|ZP_18223956.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
sakazakii 696]
gi|429089533|ref|ZP_19152265.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
universalis NCTC 9529]
gi|429092458|ref|ZP_19155086.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
dublinensis 1210]
gi|429107668|ref|ZP_19169537.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
malonaticus 681]
gi|429109246|ref|ZP_19171016.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
malonaticus 507]
gi|429114394|ref|ZP_19175312.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
sakazakii 701]
gi|429122486|ref|ZP_19183063.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
sakazakii 680]
gi|449309235|ref|YP_007441591.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii SP291]
gi|166214776|sp|A7MFI7.1|CLPX_ENTS8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|156533263|gb|ABU78089.1| hypothetical protein ESA_02860 [Cronobacter sakazakii ATCC BAA-894]
gi|333953882|gb|EGL71772.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii E899]
gi|387852421|gb|AFK00519.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii ES15]
gi|423234135|emb|CCK05826.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
sakazakii 696]
gi|426294391|emb|CCJ95650.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
malonaticus 681]
gi|426310403|emb|CCJ97129.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
malonaticus 507]
gi|426317523|emb|CCK01425.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
sakazakii 701]
gi|426322954|emb|CCK13800.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
sakazakii 680]
gi|426509336|emb|CCK17377.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
universalis NCTC 9529]
gi|426742657|emb|CCJ81199.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
dublinensis 1210]
gi|449099268|gb|AGE87302.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii SP291]
Length = 424
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 258/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRSHLDDYVIGQEKAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ R + S IGFGA V+ G + LL V+ DL+ +GLIPEFIGR P++
Sbjct: 259 ANRVETGSGIGFGATVK------GKSQKATEGELLSQVEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+ED L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKKAM++ TGARGL
Sbjct: 313 TLNELSEDALIQILKEPKNALTKQYQALFNLEGVELEFRDEALEAIAKKAMSRKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L E M+++P + V V++D+ + P
Sbjct: 373 RSIVEAALLETMYDLPSME----EVEKVVIDESVIAGQSEP 409
>gi|206602655|gb|EDZ39136.1| ClpX, ATPase regulatory subunit [Leptospirillum sp. Group II '5-way
CG']
Length = 426
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 201/425 (47%), Positives = 266/425 (62%), Gaps = 66/425 (15%)
Query: 48 SNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVY 107
S E E ET G L P EI + LD++V+GQE+AK+
Sbjct: 50 SETWEEERETAAG----------PLLKPAEINRILDQYVVGQEKAKRV------------ 87
Query: 108 VIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVL 167
AVYNHYKRI N N +D+ VEL+K N+L
Sbjct: 88 ---LSVAVYNHYKRI---------------------------NANQISDD-VELQKGNIL 116
Query: 168 LMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAA 227
++GPTG+GKTLLA+TLARI+ VPF I DAT LT+AGYVGED E+++ KLL AAD+DVE A
Sbjct: 117 MIGPTGTGKTLLAQTLARILEVPFAIADATTLTEAGYVGEDVENIILKLLQAADYDVEKA 176
Query: 228 QRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGD 286
+RGIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV NVP P G RKHP +
Sbjct: 177 ERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLVEGTVANVP-PQGG-RKHPHQE 234
Query: 287 NIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLES 346
I +DT +ILFICGGAF+GL+ IS+R ++GFGA +R D T LL +
Sbjct: 235 FIQVDTSNILFICGGAFIGLDNIISQRLSSKNLGFGAEIRTP------EDRKRTGELLAN 288
Query: 347 VDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLH 406
V DL+ YGLIPEF+GRFP++ L L+E ++L EPKNAL +Q++K+F++ V+L
Sbjct: 289 VRPDDLLKYGLIPEFVGRFPVMAVLDDLDEAAFYRILTEPKNALVKQFEKLFALEKVRLR 348
Query: 407 FTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
T+ AL+ IA KA + TGARGLRA+LE ++ + M+EIP + +V VLV +E + +
Sbjct: 349 MTEGALKAIAHKAFIQKTGARGLRAILEEVMLDLMYEIPSVQ----NVLEVLVTEETINN 404
Query: 467 VDAPG 471
+ PG
Sbjct: 405 HEPPG 409
>gi|159030461|emb|CAO91363.1| clpX [Microcystis aeruginosa PCC 7806]
Length = 444
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 194/411 (47%), Positives = 262/411 (63%), Gaps = 50/411 (12%)
Query: 58 ENGNRNRNSEGNI---DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCA 114
E N+ R+ + +P P+EI K LD++VIGQ AKK A
Sbjct: 59 ERPNKRRSGQNKTTWEQIPKPREIKKHLDDYVIGQNEAKKV---------------LSVA 103
Query: 115 VYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGS 174
VYNHYKR+ QK +G + E+ +EL+KSN+LL+GPTGS
Sbjct: 104 VYNHYKRLKDIQTQK------------------AGGGSPEDS--IELQKSNILLIGPTGS 143
Query: 175 GKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYI 234
GKTLLA+TLA+I++VPF + DAT LT+AGYVGED E++L +LL AD DVE AQRGI+YI
Sbjct: 144 GKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGIIYI 203
Query: 235 DEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTK 293
DE+DKI K+E+ + RDVSGEGVQQALLKMLEGT+ NVP P G RKHP D I IDT
Sbjct: 204 DEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVP-PQGG-RKHPYQDCIQIDTS 261
Query: 294 DILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLV 353
+ILFICGGAFVGL+K I +R S+GF P + + V + LL+ + DLV
Sbjct: 262 NILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDSQA-----SKDKVAAGLLKQMTPDDLV 316
Query: 354 AYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALR 413
+G+IPEF+GR P+L +LS L+E+ L+ +L +P+NAL +QY+K+ M+NV+L F DA+
Sbjct: 317 KFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNALVKQYQKLLKMDNVQLEFKSDAVL 376
Query: 414 LIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
IA++A + TGAR LR ++E ++ + M+E+P K V L+ +E V
Sbjct: 377 AIAQEAYRRKTGARALRGIVEELMLDVMYELPSRK----DVKRCLITREMV 423
>gi|170718337|ref|YP_001783565.1| ATP-dependent protease ATP-binding subunit ClpX [Haemophilus somnus
2336]
gi|189044137|sp|B0UW19.1|CLPX_HAES2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|168826466|gb|ACA31837.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Haemophilus
somnus 2336]
Length = 414
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 194/402 (48%), Positives = 259/402 (64%), Gaps = 58/402 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQ+ AKK AVYNHYKR+
Sbjct: 62 LPTPHEIRAHLDDYVIGQDYAKKV---------------LAVAVYNHYKRLRSE------ 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+N VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 101 ----------------------KNTSEVELGKSNILLIGPTGSGKTLLAQTLARMLNVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+VL KLL D+D+E AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 139 AMADATTLTEAGYVGEDVENVLQKLLQNCDYDIEKAQQGIIYIDEIDKITRKSENPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV + IP G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 199 DVSGEGVQQALLKLVEGTVAS--IPPQGGRKHPQQEMLRVDTSKILFICGGAFAGLDKII 256
Query: 311 SERRQDS--SIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
+R S IGFGA VR + LT+ L + V+ DL+ +GLIPEFIGR P++
Sbjct: 257 EKRTNTSGKGIGFGADVRIDEEKVSLTE------LFKQVEPDDLMKFGLIPEFIGRLPVI 310
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
LS L+E+ LV++L EPKNAL +QY+ +FS+ N++L FT +AL +AKKA+A+ TGARG
Sbjct: 311 APLSELDEEALVKILTEPKNALTKQYQVLFSLENIELEFTQEALIAMAKKALARKTGARG 370
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E +L + M+++P ++ V+V++E V P
Sbjct: 371 LRSIVETLLLDTMYDLP----SIENLQKVIVEEETVTENKVP 408
>gi|85373055|ref|YP_457117.1| ATP-dependent protease ATP-binding subunit ClpX [Erythrobacter
litoralis HTCC2594]
gi|122545320|sp|Q2NDC1.1|CLPX_ERYLH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|84786138|gb|ABC62320.1| ATP-dependent Clp protease ATPase subunit [Erythrobacter litoralis
HTCC2594]
Length = 423
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 197/410 (48%), Positives = 266/410 (64%), Gaps = 60/410 (14%)
Query: 56 ETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAV 115
ET+ G R EG D+P P EIC L+++VIGQ+RAK+ AV
Sbjct: 51 ETKAGLTGRK-EG--DVPAPSEICATLNDYVIGQDRAKRV---------------LSVAV 92
Query: 116 YNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSG 175
+NHYKR+ HS G G VEL KSN+LL+GPTGSG
Sbjct: 93 HNHYKRLKHS-------------------GKADG---------VELAKSNILLVGPTGSG 124
Query: 176 KTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYID 235
KTLLA+TLAR +VPFT+ DAT LT+AGYVGED E+++ KLL A+D++V+ AQ GIVYID
Sbjct: 125 KTLLAQTLARTFDVPFTMADATTLTEAGYVGEDVENIILKLLQASDYNVDKAQHGIVYID 184
Query: 236 EVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKD 294
E+DKI KAE+ + RDVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT +
Sbjct: 185 EIDKITRKAENPSITRDVSGEGVQQALLKLMEGTTASVP-PQGG-RKHPQQEFLQVDTTN 242
Query: 295 ILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVA 354
ILFICGGAF GL+K I++R Q SIGFGA V D LLE + DL+
Sbjct: 243 ILFICGGAFAGLDKIIADRLQKRSIGFGAHVAD-------PDKRKVGELLEKSEPEDLLK 295
Query: 355 YGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRL 414
+GLIPEF+GR P++ +L L+ D LV +L EPKNA+ +QY K+F + +V+L FTD+AL+
Sbjct: 296 FGLIPEFVGRLPVIATLHDLDVDALVTILQEPKNAIVKQYSKLFELEDVELTFTDEALQA 355
Query: 415 IAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
IA++A+ + TGARGLR+++E IL + MF++P+ ++ V++D + V
Sbjct: 356 IAERAILRKTGARGLRSIVEGILLDTMFDLPD----LDDISEVVIDADVV 401
>gi|421495378|ref|ZP_15942664.1| ATP-dependent protease ATP-binding subunit ClpX [Aeromonas media
WS]
gi|407185603|gb|EKE59374.1| ATP-dependent protease ATP-binding subunit ClpX [Aeromonas media
WS]
Length = 424
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 195/402 (48%), Positives = 262/402 (65%), Gaps = 57/402 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTP EI LD++VIGQE AKK AVYNHYKR
Sbjct: 63 ELPTPHEIRAHLDDYVIGQEYAKKV---------------LAVAVYNHYKR--------- 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
L SG +SG VEL KSN+LL+GPTGSGKTLLA+TLAR+++VP
Sbjct: 99 -----------LRSGSESGG--------VELGKSNILLIGPTGSGKTLLAETLARLLDVP 139
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
FT+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ +
Sbjct: 140 FTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSIT 199
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT ILFICGGAF GL+K
Sbjct: 200 RDVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKV 257
Query: 310 ISERR-QDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I +R + + IGFGA V++ L++ V+ DL+ YGLIPEFIGR P++
Sbjct: 258 IEQRSVKGTGIGFGADVKSKNAKATLSENFA------KVEPEDLIKYGLIPEFIGRLPVV 311
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L+ L+E L+Q+L EPKNAL +QY +F++ V+L F DDAL IA+KAM + TGARG
Sbjct: 312 ATLTELDEAALIQILKEPKNALTKQYAALFALEEVELEFRDDALNAIARKAMERKTGARG 371
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E +L + M+++P + V+ V++D+ + AP
Sbjct: 372 LRSIVEAVLLDTMYDLPSLE----GVSKVVIDETVIKGDSAP 409
>gi|262042474|ref|ZP_06015633.1| ATP-dependent Clp protease [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259040178|gb|EEW41290.1| ATP-dependent Clp protease [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 424
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 258/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S R + S IGFGA V+A +D LL V+ DL+ +GLIPEFIGR P++
Sbjct: 259 SHRVETGSGIGFGATVKAK------SDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY+ +FS+ +L F D+AL IAKKAMA+ TGARGL
Sbjct: 313 TLNELSEEALIQILKEPKNALTKQYQALFSLEGAELEFRDEALDAIAKKAMARKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P + V V++D+ + P
Sbjct: 373 RSIVEAALLDTMYDLPSME----DVEKVVIDESVIAGQSKP 409
>gi|88860445|ref|ZP_01135083.1| ATP-dependent protease ATP-binding subunit [Pseudoalteromonas
tunicata D2]
gi|88817643|gb|EAR27460.1| ATP-dependent protease ATP-binding subunit [Pseudoalteromonas
tunicata D2]
Length = 427
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 262/401 (65%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQ+ AKK AVYNHYKR+ +
Sbjct: 67 LPVPKEIRAHLDDYVIGQDHAKKV---------------LSVAVYNHYKRLKNQD----- 106
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KS N +EL KSN+LL+GPTGSGKTLLA+T+A++++VPF
Sbjct: 107 ---------------KSSN--------IELGKSNILLIGPTGSGKTLLAETMAKLLDVPF 143
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 144 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 203
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 204 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 261
Query: 311 SERR-QDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R +++ IGFG V+++ ++++ + V+ DLV YGLIPEFIGR P++
Sbjct: 262 EQRSTKNTGIGFGVDVKSSAAGRSISES------FKDVEPEDLVKYGLIPEFIGRLPVVA 315
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E LVQ+L EPKNAL +QY +F M NV+L F DDAL IAKKAM + TGARGL
Sbjct: 316 TLTELDEAALVQILNEPKNALTKQYGALFKMENVELEFRDDALLAIAKKAMDRKTGARGL 375
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E +L E M+E+P + V+ V++D+ + P
Sbjct: 376 RSIVEGVLLETMYELPSME----DVSKVVIDETVIKGESDP 412
>gi|302379712|ref|ZP_07268197.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Finegoldia
magna ACS-171-V-Col3]
gi|303234237|ref|ZP_07320883.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Finegoldia
magna BVS033A4]
gi|417926737|ref|ZP_12570128.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Finegoldia
magna SY403409CC001050417]
gi|302312619|gb|EFK94615.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Finegoldia
magna ACS-171-V-Col3]
gi|302494778|gb|EFL54538.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Finegoldia
magna BVS033A4]
gi|341588489|gb|EGS31887.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Finegoldia
magna SY403409CC001050417]
Length = 411
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 262/401 (65%), Gaps = 57/401 (14%)
Query: 65 NSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYH 124
N + IDLP P EI LD++VI QE KK+ AVYNHYKRI
Sbjct: 52 NIQERIDLPKPIEIKDVLDDYVIKQEEGKKA---------------LAVAVYNHYKRI-- 94
Query: 125 SSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLA 184
N N+ N++ VEL+KSN+LL+GPTGSGKTLLA+TLA
Sbjct: 95 -------------------------NSNLMNND-VELQKSNILLVGPTGSGKTLLAETLA 128
Query: 185 RIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KA 243
+I++VPF I DAT+LT+AGYVGED E+V+ KL+ AAD+D+E A++GI+YIDE+DKI K+
Sbjct: 129 KILDVPFAIADATSLTEAGYVGEDVENVILKLIQAADYDIEKAEQGIIYIDEIDKITRKS 188
Query: 244 ESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAF 303
E+ + RDVSGEGVQQALLK++EGT+ NVP P G RKHP + I +DT++ILFI GGAF
Sbjct: 189 ENPSITRDVSGEGVQQALLKIVEGTICNVP-PQGG-RKHPNQEYIQVDTRNILFIVGGAF 246
Query: 304 VGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIG 363
GLEK I R + SIGFGA + N S L + + DL+ +GLIPEF+G
Sbjct: 247 EGLEKIIERRTETKSIGFGADLGDNEHKK-------ISELFKDIRPEDLIKFGLIPEFVG 299
Query: 364 RFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKN 423
R P+LV+L L+E L+++L+EPKNA+ +QY+++F M++V+L F +DAL+ IAK A +
Sbjct: 300 RIPVLVTLDELDEQALIRILLEPKNAVIKQYQELFKMDDVELEFDEDALKAIAKLAYDRK 359
Query: 424 TGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
TGARGLR ++E L MFE+P ++ V++ KE+V
Sbjct: 360 TGARGLRTIIEKSLMNIMFELP----SRQDISKVILTKESV 396
>gi|241764197|ref|ZP_04762231.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acidovorax
delafieldii 2AN]
gi|241366474|gb|EER60978.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acidovorax
delafieldii 2AN]
Length = 421
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 258/401 (64%), Gaps = 55/401 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLPTP EI LD +VIGQ++AK++ AVYNHYKR+ H
Sbjct: 64 DLPTPVEIKANLDNYVIGQDQAKRT---------------LAVAVYNHYKRLRHK----- 103
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
D + D VEL KSN+LL+GPTGSGKTLLA+TLAR+++VP
Sbjct: 104 ---DKAHKDD------------------VELSKSNILLIGPTGSGKTLLAQTLARMLDVP 142
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LT+AGYVGED E+++ KLL + +++VE AQRGIVYIDE+DKI K+++ +
Sbjct: 143 FVMADATTLTEAGYVGEDVENIVQKLLQSCNYEVERAQRGIVYIDEIDKISRKSDNPSIT 202
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGT+ +VP P G RKHP D + IDT +ILFICGGAF GLEK
Sbjct: 203 RDVSGEGVQQALLKLIEGTMASVP-PQGG-RKHPNQDFLQIDTTNILFICGGAFAGLEKV 260
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R + S IGFGA V++ + LT+ ++ DL+ +GLIPE +GR P++
Sbjct: 261 IENRTEASGIGFGASVKSK-KQRSLTEVFT------EIEPEDLIKFGLIPELVGRMPVVT 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+ED LVQ+L EPKNAL +QY K+ +M V L AL+ IA+KA+A+ TGARGL
Sbjct: 314 ALAELSEDALVQILTEPKNALVKQYSKLLAMEGVDLEIRPAALKAIARKALARKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE L MF++P TS+V V+VD+ + P
Sbjct: 374 RSILEQALIGTMFDLP----NTSNVEKVVVDESTIDESKPP 410
>gi|411001053|gb|AFV98782.1| ClpX [Candidatus Snodgrassella sp. TA1_30860]
Length = 452
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 199/411 (48%), Positives = 258/411 (62%), Gaps = 53/411 (12%)
Query: 55 SETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCA 114
S TENG + +G LPTP EI LD++VIGQE AKKS A
Sbjct: 79 SSTENGMPAADGDGQEKLPTPAEIVANLDQYVIGQETAKKS---------------LAVA 123
Query: 115 VYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGS 174
VYNHYKR L G + G VEL KSN+LL+GPTGS
Sbjct: 124 VYNHYKR--------------------LRLGKEEGQ--------VELSKSNILLIGPTGS 155
Query: 175 GKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYI 234
GKTLLA+TLAR ++VPF + DAT LT+AGYVGED E ++ KLL DFDV+ AQ+GIVYI
Sbjct: 156 GKTLLAQTLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLGKCDFDVQKAQKGIVYI 215
Query: 235 DEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTK 293
DE+DKI K+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP + I +DT
Sbjct: 216 DEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPNQEFINVDTT 273
Query: 294 DILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLV 353
+ILFICGGAF GLEK I +R + IGFGA V + + S L ++V+ DL+
Sbjct: 274 NILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSKDENTNV------SELFQTVEPEDLI 327
Query: 354 AYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALR 413
+GLIPE IGR P++ +L+ L+ED L+ +L EPKNAL +Q++ +F+M V+L ALR
Sbjct: 328 KFGLIPELIGRLPVIATLTELDEDALINILTEPKNALIKQFQALFAMEGVELQVQPSALR 387
Query: 414 LIAKKAMAKNTGARGLRALLENILTEAMFEIPE-TKIGTSSVNAVLVDKEA 463
IAK AMA+ TGARGLR+++E L M+ +P+ + VN ++DK A
Sbjct: 388 AIAKLAMARKTGARGLRSIVEKALLNTMYALPDLNDVKKVVVNQDVIDKGA 438
>gi|419762102|ref|ZP_14288351.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae DSM 30104]
gi|397745020|gb|EJK92229.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae DSM 30104]
Length = 436
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 259/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 76 LPTPHEIRHHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 112
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + N VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 113 ------------------NGDTSNG--VELGKSNILLIGPTGSGKTLLAETLARLLDVPF 152
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 153 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 212
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 213 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 270
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S R + S IGFGA V+A +D LL V+ DL+ +GLIPEFIGR P++
Sbjct: 271 SHRVETGSGIGFGATVKAK------SDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVA 324
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY+ +FS+ +L F D+AL IAKKAMA+ TGARGL
Sbjct: 325 TLNELSEEALIQILKEPKNALTKQYQALFSLEGAELEFRDEALDAIAKKAMARKTGARGL 384
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P + V V++D+ + P
Sbjct: 385 RSIVEAALLDTMYDLPSME----DVEKVVIDESVIAGQSKP 421
>gi|415884180|ref|ZP_11546209.1| ATP-dependent Clp protease [Bacillus methanolicus MGA3]
gi|387591975|gb|EIJ84292.1| ATP-dependent Clp protease [Bacillus methanolicus MGA3]
Length = 421
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 202/409 (49%), Positives = 262/409 (64%), Gaps = 61/409 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI + LDE+VIGQ++AKKS AVYNHYKRI
Sbjct: 60 DVPKPKEIREILDEYVIGQDQAKKS---------------LSVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N N + D+ VEL KSN+ ++GPTGSGKTLLA+TLARI+NVP
Sbjct: 97 -------------------NSNSKIDD-VELSKSNICMIGPTGSGKTLLAQTLARILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A++GI+YIDE+DKI K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIIYIDEIDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFICGGAF G+E
Sbjct: 197 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFDGIEPI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R IGFG + + + D LL V DL+ +GLIPEF+GR P++
Sbjct: 255 IKRRLGQKVIGFG----GDSKIPEVDD----KDLLSKVLPEDLLKFGLIPEFVGRLPVIA 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SL L+ED LV++L +PKNAL +QY+KM ++ V+L F D AL+ IAKKA+ + TGARGL
Sbjct: 307 SLEQLDEDALVEILTKPKNALVKQYQKMLELDGVELEFEDAALQEIAKKAIERKTGARGL 366
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILH 478
R+++E I+ + MFE+P + ++ KE V + AP ILH
Sbjct: 367 RSIIEGIMLDVMFELP----SRDDITKCIITKETVANNSAPKL---ILH 408
>gi|315641097|ref|ZP_07896176.1| ATP-dependent Clp protease ATP-binding subunit [Enterococcus
italicus DSM 15952]
gi|315483105|gb|EFU73622.1| ATP-dependent Clp protease ATP-binding subunit [Enterococcus
italicus DSM 15952]
Length = 416
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 197/402 (49%), Positives = 260/402 (64%), Gaps = 55/402 (13%)
Query: 70 IDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQK 129
+D+P P+E+ K L+E+VIGQ+RAKK+ AVYNHYKRI ++L K
Sbjct: 59 LDVPKPQELLKILNEYVIGQDRAKKA---------------LSVAVYNHYKRI-SANLDK 102
Query: 130 ELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNV 189
SG +E VEL+KSN+ L+GPTGSGKT LA+TLA+ +NV
Sbjct: 103 ------------------SGE-----EEDVELQKSNICLIGPTGSGKTFLAQTLAKSLNV 139
Query: 190 PFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNN 248
PF I DAT+LT+AGYVGED E++L KLL AADFDVE AQ GI+YIDE+DKI K E+ +
Sbjct: 140 PFAIADATSLTEAGYVGEDVENILLKLLQAADFDVEYAQNGIIYIDEIDKIARKGENVSI 199
Query: 249 GRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEK 308
RDVSGEGVQQALLK+LEGT+ NVP P G RKHP + I +DT +ILFI GGAF G+E
Sbjct: 200 TRDVSGEGVQQALLKILEGTIANVP-PQGG-RKHPHQEMIQLDTTNILFIVGGAFDGIET 257
Query: 309 TISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
+ R + +IGFG+ R S ++ + DL+ +GLIPEFIGR P++
Sbjct: 258 IVKNRMGEKTIGFGSNNRKLPE---------KESTMKYIIPEDLLKFGLIPEFIGRLPVM 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L D LV++L EPKNAL +QYKK+ S++ +L F DDALR IA+KA+ +NTGARG
Sbjct: 309 AALDKLTVDDLVRILTEPKNALVKQYKKLLSLDETELVFEDDALRAIAQKAIERNTGARG 368
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E I+ + MFE+P + V++ KEA + P
Sbjct: 369 LRSIIEEIMMDIMFEVP----SQEEIEKVIITKEAALETEKP 406
>gi|269125775|ref|YP_003299145.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermomonospora curvata DSM 43183]
gi|268310733|gb|ACY97107.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermomonospora curvata DSM 43183]
Length = 425
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 193/394 (48%), Positives = 258/394 (65%), Gaps = 54/394 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P+EI + LD +VIGQE AKK+ AVYNHYKRI
Sbjct: 61 LPKPREIYEFLDSYVIGQEAAKKA---------------LSVAVYNHYKRI--------- 96
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+SG+ D+ VEL KSN+LL+GPTGSGKTLLA+TLA+++NVPF
Sbjct: 97 ---------------QSGDSG--RDDSVELAKSNILLLGPTGSGKTLLAQTLAKLLNVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DATALT+AGYVGED E++L KL+ AAD+DV+ A+ GI+YIDEVDKI K+E+ + R
Sbjct: 140 AIADATALTEAGYVGEDVENILLKLIQAADYDVKKAETGIIYIDEVDKIARKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGT +VP P G RKHP + I IDT ++LFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKILEGTTASVP-PQGG-RKHPHQEFIQIDTTNVLFICGGAFAGLEKII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R +GFGA +R+ +A +S +L + DL+ +G+IPEF+GR P++ +
Sbjct: 258 EARIGKQGMGFGAVIRSK------DEASSSSDILSQIMPEDLLKFGMIPEFVGRLPVITN 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
+ L+ D L+ +L EPKNAL +QYK++F ++ V+L FT DAL IA +A+ + TGARGLR
Sbjct: 312 VHNLDRDALIAILTEPKNALVKQYKRLFELDGVELEFTPDALEAIADQAILRGTGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
A++E +L M+E+P + V V++ +EAV
Sbjct: 372 AIMEEVLLSVMYEVPSRQ----DVARVVITREAV 401
>gi|423067860|ref|ZP_17056650.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Arthrospira
platensis C1]
gi|406710603|gb|EKD05810.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Arthrospira
platensis C1]
Length = 456
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 199/397 (50%), Positives = 259/397 (65%), Gaps = 41/397 (10%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LP P EI + LD+ VIGQ KK AVYNHYKR
Sbjct: 77 ELPKPVEIKQYLDKHVIGQNNTKKV---------------LSVAVYNHYKR--------- 112
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
L VD+ S +DE VEL+KSN+LLMGPTG GKTLLA++LA++++VP
Sbjct: 113 -----LSVDAGNMSNQDFDETQGYSDEQVELQKSNILLMGPTGCGKTLLAESLAKLLDVP 167
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LT+AGYVG+D E++L +LL ADFD+EAAQ+GI+YIDE+DKI K+E+ +
Sbjct: 168 FAVADATTLTEAGYVGDDVENILLRLLQVADFDIEAAQQGIIYIDEIDKIARKSENTSIT 227
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTVVNVP P G RKHP D I IDT ILFICGGAFVGL+K
Sbjct: 228 RDVSGEGVQQALLKILEGTVVNVP-PQGG-RKHPYQDFIQIDTSKILFICGGAFVGLDKL 285
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTD--ALVTSSLLESVDSGDLVAYGLIPEFIGRFPI 367
+ +R S+GF P ++ G ++ T+ +L++V+ DLV +GLIPEFIGR P+
Sbjct: 286 VEQRMGKKSLGFIQP---GVKPGEEVQKTSVDTTEILQNVEPQDLVKFGLIPEFIGRVPV 342
Query: 368 LVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGAR 427
L +S L+E+ LV++L EP NAL +QYK++ M+NV L F DAL IAK+A + TGAR
Sbjct: 343 LTVISPLDEEALVKILTEPHNALVKQYKQLLKMDNVSLEFEPDALIAIAKEAYRRKTGAR 402
Query: 428 GLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
LR +LE ++ E M+E+P K VN ++ KE V
Sbjct: 403 ALRGILEELMLEVMYELPSRK----DVNRCVITKEMV 435
>gi|425078087|ref|ZP_18481190.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|425088720|ref|ZP_18491813.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|405591066|gb|EKB64579.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|405601812|gb|EKB74965.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
Length = 424
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 198/417 (47%), Positives = 266/417 (63%), Gaps = 61/417 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S R + S IGFGA V+A +D LL V+ DL+ +GLIPEFIGR P++
Sbjct: 259 SHRVETGSGIGFGATVKAK------SDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY+ +FS+ +L F D+AL IAKKAMA+ TGARGL
Sbjct: 313 TLNELSEEALIQILKEPKNALTKQYQALFSLEGAELEFRDEALDAIAKKAMARKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERV 486
R+++E L + M+++P + V V++D+ + P +++G E ++V
Sbjct: 373 RSIVEAALLDTMYDLPSME----DVEKVVIDESVIAGQSKP----LLIYGKPEAQQV 421
>gi|434391261|ref|YP_007126208.1| ATP-dependent Clp protease ATP-binding subunit clpX [Gloeocapsa sp.
PCC 7428]
gi|428263102|gb|AFZ29048.1| ATP-dependent Clp protease ATP-binding subunit clpX [Gloeocapsa sp.
PCC 7428]
Length = 446
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 195/428 (45%), Positives = 268/428 (62%), Gaps = 48/428 (11%)
Query: 45 DGESNGIESESETENGNRNRNSEGNI---DLPTPKEICKGLDEFVIGQERAKKSHIFCIL 101
D + + + E + R+ N +P P+EI K LD+ VIGQ+ AKK + +
Sbjct: 49 DSKETAPQPPNRVEAPPKRRSRASNFSFSQMPKPREIKKHLDDHVIGQDEAKK--VLSV- 105
Query: 102 VDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVEL 161
AVYNHYKR+ L SG + E E VEL
Sbjct: 106 ------------AVYNHYKRLS------------------LVQAKNSGKASSE--EAVEL 133
Query: 162 EKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAAD 221
+KSN+LL+GPTG GKTLLA+TLA+I++VPF + DAT LT+AGYVGED E++L +LL AD
Sbjct: 134 QKSNILLIGPTGCGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLLQVAD 193
Query: 222 FDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPR 280
DVE AQRGI+YIDE+DKI K+E+ + RDVSGEGVQQALLKMLEGT+ NVP P G R
Sbjct: 194 LDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTLANVP-PQGG-R 251
Query: 281 KHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVT 340
KHP D I IDT +ILFICGGAFVGLEK + +R S+GF P ++ R T
Sbjct: 252 KHPYQDCIQIDTSNILFICGGAFVGLEKVVEQRTGKKSMGFIQPGESSSRDQR------T 305
Query: 341 SSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSM 400
+ +L ++ DLV +G+IPEFIGR P++ L L+E+ L+ +L +P++AL +QY+K+ M
Sbjct: 306 ADVLRHLEPDDLVKFGMIPEFIGRVPVVAVLDPLDEEALMAILTQPRSALVKQYQKLLKM 365
Query: 401 NNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETK-IGTSSVNAVLV 459
+NV+L F DALR IA++A + TGAR LR ++E ++ + M+E+P K + +V +V
Sbjct: 366 DNVQLEFKPDALRAIAQEAYRRKTGARALRGIVEELMLDVMYELPSRKDVTRCTVTPEMV 425
Query: 460 DKEAVGSV 467
+K + +
Sbjct: 426 EKRSTAEL 433
>gi|377576798|ref|ZP_09805782.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
hermannii NBRC 105704]
gi|377542830|dbj|GAB50947.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
hermannii NBRC 105704]
Length = 424
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 260/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N ++ VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDSSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ R + S IGFGA V+ G + LL V+ DL+ +GLIPEFIGR P++
Sbjct: 259 ANRVETGSGIGFGATVK------GKSQKATEGELLTQVEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+LS L+E+ L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKKAM++ TGARGL
Sbjct: 313 TLSELSEEALIQILKEPKNALTKQYQALFNLEGVELEFRDEALEAIAKKAMSRKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P + V V++D+ +G P
Sbjct: 373 RSIVEGALLDTMYDLPSME----DVEKVVIDESVIGGQSEP 409
>gi|444375829|ref|ZP_21175081.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Enterovibrio
sp. AK16]
gi|443680057|gb|ELT86705.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Enterovibrio
sp. AK16]
Length = 426
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 194/396 (48%), Positives = 258/396 (65%), Gaps = 56/396 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTP+EI LD++VIGQ+RAKK AVYNHYKR+
Sbjct: 64 ELPTPQEIRAHLDDYVIGQDRAKKV---------------LSVAVYNHYKRL-------- 100
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
++G+ + VEL KSN+LL+GPTGSGKTLLA+TLAR ++VP
Sbjct: 101 ----------------RNGDTTADG---VELGKSNILLIGPTGSGKTLLAETLARFLDVP 141
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
FT+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI K+++ +
Sbjct: 142 FTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKSDNPSIT 201
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT ILFICGGAF GL+K
Sbjct: 202 RDVSGEGVQQALLKLVEGTIASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKV 259
Query: 310 ISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
+ +R + S IGFGA VR + L+D L V+ DLV YGLIPEFIGR P+
Sbjct: 260 VDQRVAKGSGIGFGAEVRTKDQEATLSD------LFSKVEPEDLVKYGLIPEFIGRLPVT 313
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
L L+ED LVQ+L EPKNAL +QY + ++ V+L F DDAL IAKKAM + TGARG
Sbjct: 314 AILGELDEDALVQILREPKNALTKQYAALLELDGVELEFRDDALTAIAKKAMDRKTGARG 373
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
LR+++E +L + M+++P +K V V++D+ +
Sbjct: 374 LRSIVEAVLLDTMYDLPSSK----DVTKVVIDESVI 405
>gi|254480379|ref|ZP_05093626.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [marine gamma
proteobacterium HTCC2148]
gi|214038962|gb|EEB79622.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [marine gamma
proteobacterium HTCC2148]
Length = 432
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 192/394 (48%), Positives = 255/394 (64%), Gaps = 53/394 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P+EI LDE+VIGQ+RAKK AVYNHYKR+ H+ Q
Sbjct: 67 LPVPQEINGILDEYVIGQKRAKKV---------------LSVAVYNHYKRLRHAQSQT-- 109
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
E VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 110 -----------------------RGEEVELGKSNILLVGPTGSGKTLLAETLARLLDVPF 146
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 147 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQVGIVYIDEIDKISRKSDNPSITR 206
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+ I
Sbjct: 207 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSNILFICGGAFAGLDNVI 264
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R + IGFGA V++ T + + LL ++ DLV YGLIPEF+GR P++ +
Sbjct: 265 RNRSEKRGIGFGAEVKSKDETSNIGE------LLFELEPEDLVQYGLIPEFVGRLPVIAT 318
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ + LVQ+L EPKN+L +QY K+F M V++ F +D L +A+KAM + TGARGLR
Sbjct: 319 LEELDAEALVQILTEPKNSLTKQYSKLFEMEGVEVDFREDGLHAVAEKAMERKTGARGLR 378
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
++LE IL ++M+ IP V+ V++D+ +
Sbjct: 379 SILEGILLDSMYNIP----SRDDVSKVVIDESVI 408
>gi|113461576|ref|YP_719645.1| ATP-dependent protease ATP-binding subunit ClpX [Haemophilus somnus
129PT]
gi|122945369|sp|Q0I4F0.1|CLPX_HAES1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|112823619|gb|ABI25708.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Haemophilus
somnus 129PT]
Length = 414
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 194/402 (48%), Positives = 259/402 (64%), Gaps = 58/402 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQ+ AKK AVYNHYKR+
Sbjct: 62 LPTPHEIRAHLDDYVIGQDYAKKV---------------LAVAVYNHYKRLRSE------ 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+N VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 101 ----------------------KNTSEVELGKSNILLIGPTGSGKTLLAQTLARMLNVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+VL KLL D+D+E AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 139 AMADATTLTEAGYVGEDVENVLQKLLQNCDYDIEKAQQGIIYIDEIDKITRKSENPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV + IP G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 199 DVSGEGVQQALLKLVEGTVAS--IPPQGGRKHPQQEMLRVDTSKILFICGGAFAGLDKII 256
Query: 311 SERRQD--SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
+R IGFGA VR + LT+ L + V+ DL+ +GLIPEFIGR P++
Sbjct: 257 EKRTNTGGKGIGFGADVRIDEEKVSLTE------LFKQVEPDDLMKFGLIPEFIGRLPVI 310
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
LS L+E+ LV++L EPKNAL +QY+ +FS+ N++L FT +AL +AKKA+A+ TGARG
Sbjct: 311 APLSELDEEALVKILTEPKNALTKQYQVLFSLENIELEFTQEALIAMAKKALARKTGARG 370
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E +L + M+++P ++ V+V++E V AP
Sbjct: 371 LRSIVETLLLDTMYDLP----SIENLQKVIVEEETVTENKAP 408
>gi|291520782|emb|CBK79075.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Coprococcus
catus GD/7]
Length = 432
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 202/438 (46%), Positives = 274/438 (62%), Gaps = 62/438 (14%)
Query: 65 NSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYH 124
++ + +L P EI LD++VIGQE+AKK AVYNHYKRI
Sbjct: 54 QNDADFNLLKPVEIKNFLDQYVIGQEQAKKV---------------LSVAVYNHYKRIA- 97
Query: 125 SSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLA 184
N ND VEL+KSN++++GPTGSGKTLLA+TLA
Sbjct: 98 --------------------------SNAGND--VELQKSNIIMVGPTGSGKTLLAQTLA 129
Query: 185 RIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KA 243
+I+NVPF I DATALT+AGYVGED E++L KL+ AAD+D+E A+RGI+YIDE+DKI K+
Sbjct: 130 KILNVPFAIADATALTEAGYVGEDVENILLKLIQAADYDIEKAERGIIYIDEIDKITKKS 189
Query: 244 ESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAF 303
E+ + RDVSGEGVQQALLK+LEGTV +VP P G RKHP + + IDT +ILFICGGAF
Sbjct: 190 ENVSITRDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFLQIDTTNILFICGGAF 247
Query: 304 VGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIG 363
GL+K + R SIGF A + + S L++ D V YGLIPEF+G
Sbjct: 248 DGLDKIVESRTGGQSIGFNADIHVKEEEQNV------SELMKQALPQDFVKYGLIPEFVG 301
Query: 364 RFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKN 423
R P+ VSL L+ED LV+VL EPK+A+ +QYKK+F ++ V L F D+A+ IA ++ +N
Sbjct: 302 RVPVSVSLDLLDEDALVRVLTEPKSAIIKQYKKLFQLDGVDLEFEDEAVHEIAHRSFMRN 361
Query: 424 TGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGEL 483
TGARGLR+++EN+L + MF +P + +V ++ K V AP +++HG+ +L
Sbjct: 362 TGARGLRSIVENVLMDTMFTLPSDE----TVEKCIITKAVVDGQAAP----ELVHGEPQL 413
Query: 484 ERVLHET-KSAHENDSEV 500
+T KS+ +N E+
Sbjct: 414 PSKKGQTKKSSRKNSGEI 431
>gi|157962501|ref|YP_001502535.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella
pealeana ATCC 700345]
gi|189044152|sp|A8H613.1|CLPX_SHEPA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|157847501|gb|ABV88000.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
pealeana ATCC 700345]
Length = 425
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 259/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP E+ LD++VIGQ++AKK AVYNHYKR+ ++S
Sbjct: 65 LPTPHELRAHLDDYVIGQDKAKKV---------------LAVAVYNHYKRLRNAS----- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 105 --------------PKDG---------VELGKSNILLIGPTGSGKTLLAETLARVLDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ VP P G RKHP+ + + +DT ILF+CGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQVDTSKILFVCGGAFAGLEKVI 259
Query: 311 SERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA V+ G D S L V+ DLV +GLIPEFIGR P+L
Sbjct: 260 EQRAHVGTGIGFGAQVK------GEADKKTISDTLLEVEPEDLVKFGLIPEFIGRLPVLA 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+LS L+++ L+Q+L EPKNA+ +Q+ +F M NV+L F DDAL+ IA KA + TGARGL
Sbjct: 314 TLSELDDEALIQILSEPKNAITKQFAALFEMENVELEFRDDALKAIALKAQTRKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E IL + M+++P T V V++D+ V +P
Sbjct: 374 RSIVEGILLDIMYDLP----STDDVAKVVIDESVVKGESSP 410
>gi|152968973|ref|YP_001334082.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|238893387|ref|YP_002918121.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|330011534|ref|ZP_08307120.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
sp. MS 92-3]
gi|365138465|ref|ZP_09345149.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella sp.
4_1_44FAA]
gi|378977300|ref|YP_005225441.1| ATP-dependent protease ATP-binding subunit [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|386033453|ref|YP_005953366.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae KCTC 2242]
gi|402782115|ref|YP_006637661.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|419973311|ref|ZP_14488736.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|419978495|ref|ZP_14493791.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|419983881|ref|ZP_14499030.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|419989933|ref|ZP_14504907.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|419995812|ref|ZP_14510617.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|420000723|ref|ZP_14515381.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|420007651|ref|ZP_14522144.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|420013284|ref|ZP_14527595.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|420018369|ref|ZP_14532566.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|420024460|ref|ZP_14538473.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|420030218|ref|ZP_14544045.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|420035321|ref|ZP_14548985.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|420041655|ref|ZP_14555151.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|420047716|ref|ZP_14561032.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|420053418|ref|ZP_14566596.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|420058262|ref|ZP_14571275.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|420064550|ref|ZP_14577359.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|420070363|ref|ZP_14583015.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|420076106|ref|ZP_14588579.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|420084375|ref|ZP_14596635.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|421908673|ref|ZP_16338508.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421918683|ref|ZP_16348198.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|424829258|ref|ZP_18253986.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae Ecl8]
gi|424934795|ref|ZP_18353167.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|425080159|ref|ZP_18483256.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|425090281|ref|ZP_18493366.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|428149079|ref|ZP_18996911.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|428933609|ref|ZP_19007157.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae JHCK1]
gi|428939230|ref|ZP_19012343.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae VA360]
gi|449060066|ref|ZP_21737738.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae hvKP1]
gi|166214780|sp|A6T5I1.1|CLPX_KLEP7 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|150953822|gb|ABR75852.1| ATP-dependent protease ATP-binding subunit [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|238545703|dbj|BAH62054.1| ATP-dependent protease ATP-binding subunit [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|328534151|gb|EGF60786.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
sp. MS 92-3]
gi|339760581|gb|AEJ96801.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae KCTC 2242]
gi|363654925|gb|EHL93798.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella sp.
4_1_44FAA]
gi|364516711|gb|AEW59839.1| ATP-dependent protease ATP-binding subunit [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|397348783|gb|EJJ41881.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|397351566|gb|EJJ44649.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|397354932|gb|EJJ47958.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|397366796|gb|EJJ59411.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|397368454|gb|EJJ61060.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|397372938|gb|EJJ65410.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|397380233|gb|EJJ72418.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|397384352|gb|EJJ76472.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|397390326|gb|EJJ82236.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|397399075|gb|EJJ90732.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|397402039|gb|EJJ93651.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|397408057|gb|EJJ99433.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|397416556|gb|EJK07729.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|397418192|gb|EJK09351.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|397424203|gb|EJK15110.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|397433256|gb|EJK23906.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|397437303|gb|EJK27872.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|397441745|gb|EJK32111.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|397447617|gb|EJK37807.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|397450261|gb|EJK40371.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|402542977|gb|AFQ67126.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|405607084|gb|EKB80054.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|405613965|gb|EKB86686.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|407808982|gb|EKF80233.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|410117464|emb|CCM81133.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410118950|emb|CCM90823.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|414706677|emb|CCN28381.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae Ecl8]
gi|426304301|gb|EKV66448.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae VA360]
gi|426304863|gb|EKV66997.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae JHCK1]
gi|427540936|emb|CCM93049.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|448874274|gb|EMB09329.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae hvKP1]
Length = 424
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 258/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S R + S IGFGA V+A +D LL V+ DL+ +GLIPEFIGR P++
Sbjct: 259 SHRVETGSGIGFGATVKAK------SDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY+ +FS+ +L F D+AL IAKKAMA+ TGARGL
Sbjct: 313 TLNELSEEALIQILKEPKNALTKQYQALFSLEGAELEFRDEALDAIAKKAMARKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P + V V++D+ + P
Sbjct: 373 RSIVEAALLDTMYDLPSME----DVEKVVIDESVIAGQSKP 409
>gi|167624685|ref|YP_001674979.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella
halifaxensis HAW-EB4]
gi|189044151|sp|B0TLU8.1|CLPX_SHEHH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167354707|gb|ABZ77320.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
halifaxensis HAW-EB4]
Length = 425
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 260/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP E+ LD++VIGQ++AKK AVYNHYKR+ +++
Sbjct: 65 LPTPHELRAHLDDYVIGQDKAKKV---------------LAVAVYNHYKRLRNAT----- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 105 --------------PKDG---------VELGKSNILLIGPTGSGKTLLAETLARVLDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ VP P G RKHP+ + + +DT ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLEKVI 259
Query: 311 SERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA V+ ++D L+ V+ DLV +GLIPEFIGR P+L
Sbjct: 260 EQRAHVGTGIGFGAEVKGEADKKSISDTLL------QVEPEDLVKFGLIPEFIGRLPVLA 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+LS L+++ L+Q+L EPKNA+ +Q+ +F M NV+L F DDAL+ IA KA + TGARGL
Sbjct: 314 TLSELDDEALIQILSEPKNAITKQFAALFEMENVELEFRDDALKAIALKAQTRKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E IL + M+++P T V V++D+ V +P
Sbjct: 374 RSIVEGILLDIMYDLP----STDDVAKVVIDESVVKGESSP 410
>gi|451982760|ref|ZP_21931062.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 18A]
gi|451759537|emb|CCQ83585.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 18A]
Length = 426
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 195/400 (48%), Positives = 255/400 (63%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPAPKEIRTILDQYVIGQERAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + D+I EL KSN+L++GPTGSGKTLLA+TLAR++NVPF
Sbjct: 101 ------------------NQRDKKDDI-ELGKSNILMIGPTGSGKTLLAETLARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLE+ I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFAGLERVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + +A + V+ DLV +GLIPEF+GR P++ +
Sbjct: 260 QNRSARGGIGFNAEVRSQEMGKKVGEA------FKEVEPEDLVKFGLIPEFVGRLPVIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +A+KA+ + TGARGLR
Sbjct: 314 LDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRPDALKAVARKALERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE IL + M+EIP + V+ V +D+ + P
Sbjct: 374 SILEGILLDTMYEIPSQQ----DVSKVAIDESVIDGSSQP 409
>gi|253687444|ref|YP_003016634.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|259491264|sp|C6DB56.1|CLPX_PECCP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|251754022|gb|ACT12098.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 424
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 194/402 (48%), Positives = 262/402 (65%), Gaps = 59/402 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI + LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRRHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N ++ +EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 --------------------NGDSSNGIELGKSNILLIGPTGSGKTLLAETLARFLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQDS--SIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
E+R D+ IGF A V+ G D LL +V+ GDL+ +GLIPEFIGR P++
Sbjct: 259 -EQRTDTGRGIGFNATVK------GSADKATEGELLSNVEPGDLIKFGLIPEFIGRLPVV 311
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E+ L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKKAMA+ TGARG
Sbjct: 312 ATLRELSEEALIQILREPKNALTKQYQALFNLEGVELEFRDEALTAIAKKAMARKTGARG 371
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E L + M+++P + SV+ V++D+ + P
Sbjct: 372 LRSIVEAALLDTMYDLPSLE----SVDKVVIDESVIAGQSEP 409
>gi|403507995|ref|YP_006639633.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Nocardiopsis
alba ATCC BAA-2165]
gi|402803039|gb|AFR10449.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Nocardiopsis
alba ATCC BAA-2165]
Length = 425
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 190/394 (48%), Positives = 255/394 (64%), Gaps = 54/394 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P+EI LD +VIGQE+AKK+ AVYNHYKR+ S
Sbjct: 61 LPKPREIFDFLDSYVIGQEQAKKA---------------LSVAVYNHYKRVRSES----- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ DE VE+ KSN+LL+GPTGSGKTLLA+TLARI+NVPF
Sbjct: 101 --------------------DRPGDEDVEIAKSNILLLGPTGSGKTLLAQTLARILNVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DATALT+AGYVGED E++L KL+ AAD+DV+ A+ GI+YIDEVDK+ K+E+ + R
Sbjct: 141 AIADATALTEAGYVGEDVENILLKLIQAADYDVKKAETGIIYIDEVDKVARKSENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGT +VP P G RKHP + I IDT ++LFICGGAF GLE+ I
Sbjct: 201 DVSGEGVQQALLKILEGTTASVP-PQGG-RKHPHQEFIQIDTTNVLFICGGAFAGLEQII 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R +GF A +R T G ++L V DL+ +G+IPEFIGR P++ S
Sbjct: 259 ESRTGQQGMGFNAVLRPKSETSG-------TALFGEVMPEDLLKFGMIPEFIGRLPVITS 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
+ L++ L+Q+L EP+NAL +QY+++F ++NV+L FT DAL IA++ + + TGARGLR
Sbjct: 312 VHNLDKAALIQILTEPRNALVKQYQRLFELDNVELEFTQDALEAIAEQGIIRGTGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
A++E +L M+E+P + V V++ +E+V
Sbjct: 372 AIIEEVLLSVMYEVPSRE----DVAQVIITRESV 401
>gi|387886909|ref|YP_006317208.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
noatunensis subsp. orientalis str. Toba 04]
gi|386871725|gb|AFJ43732.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
noatunensis subsp. orientalis str. Toba 04]
Length = 416
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 195/400 (48%), Positives = 252/400 (63%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
L P EI K LD ++IGQ+ AKK AVYNHYKRI
Sbjct: 56 LSKPIEIKKYLDNYIIGQDNAKKV---------------LSVAVYNHYKRI--------- 91
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N D+ EL+KSNVLL+GPTGSGKTL A+TLA+++NVPF
Sbjct: 92 ------------------TSNTTKDD-TELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPF 132
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVG+D E+V+ +LL ADFDV AQ+GI+YIDE+DKI K+ES + R
Sbjct: 133 AIADATTLTEAGYVGDDVENVIVRLLQNADFDVAKAQKGIIYIDEIDKIARKSESASITR 192
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP D I +DT DILFICGGAF G+EK +
Sbjct: 193 DVSGEGVQQALLKLIEGTVSSVP-PKGG-RKHPNQDMIQVDTSDILFICGGAFAGIEKVV 250
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R SIGF A V ++L T L+ V+S DL +GLIPE IGR PI+
Sbjct: 251 KHRMDKVSIGFNADVIQQ------KNSLNTEKLMRKVESEDLTRFGLIPELIGRLPIVTV 304
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L E+ LV++L EPKNAL +QY K+F ++V + F+D++L IAKKA+AK TGARGLR
Sbjct: 305 LNELKEEDLVKILTEPKNALIKQYVKLFKFDDVAIEFSDESLIQIAKKAIAKKTGARGLR 364
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+LEN+L E MF +P ++ V+++ + + + + P
Sbjct: 365 TILENVLLEVMFHVP----SLDDIDKVIINDKVILAQEEP 400
>gi|283784264|ref|YP_003364129.1| ATP-dependent Clp protease ATP-binding subunit [Citrobacter
rodentium ICC168]
gi|282947718|emb|CBG87273.1| ATP-dependent Clp protease ATP-binding subunit [Citrobacter
rodentium ICC168]
Length = 424
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 259/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ R + S IGFGA V+A +D LL V+ DL+ +GLIPEFIGR P++
Sbjct: 259 ANRVETGSGIGFGATVKAK------SDKASEGELLSQVEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY+ +F++ V L F D+AL IAKKAMA+ TGARGL
Sbjct: 313 TLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P + V V++D+ +G P
Sbjct: 373 RSIVEAALLDTMYDLPSLE----DVEKVVIDESVIGGQSKP 409
>gi|226939793|ref|YP_002794866.1| ClpX [Laribacter hongkongensis HLHK9]
gi|226714719|gb|ACO73857.1| ClpX [Laribacter hongkongensis HLHK9]
Length = 422
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 191/400 (47%), Positives = 257/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+P+EI + LD++VIGQE+AKK+ AVYNHYKR+
Sbjct: 65 LPSPREIREALDQYVIGQEQAKKA---------------LSVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N ++ VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 ------------------NAKSDDKNEVELSKSNILLIGPTGSGKTLLAQTLARVLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED ES++ KLL D+D + AQRGI+YIDE+DKI K+++ + R
Sbjct: 143 AIADATTLTEAGYVGEDVESIITKLLQKCDYDAQKAQRGIIYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV NVP P G RK+P + I +DT +ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLVEGTVANVP-PQGG-RKNPNAEFIQVDTTNILFICGGAFDGLEKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + IGFGA V + D LL + DL+ +GLIPEFIGR P++
Sbjct: 261 RQRTEKGGIGFGAEVASK------NDQKAVGELLRDTEPEDLIKFGLIPEFIGRLPVVAL 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+ +L EPKNAL +QY+K+F M V+L AL IAK+A+A+ TGARGLR
Sbjct: 315 LEPLDEEALMTILTEPKNALAKQYRKLFEMEGVELDLKPSALLAIAKQALARRTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+++E L + M+E+P + +V V+VD++ + + +AP
Sbjct: 375 SIVERALLDTMYELPSLE----NVATVVVDEKVIDNGEAP 410
>gi|365855579|ref|ZP_09395624.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Acetobacteraceae bacterium AT-5844]
gi|363719006|gb|EHM02325.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Acetobacteraceae bacterium AT-5844]
Length = 418
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 188/375 (50%), Positives = 254/375 (67%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI K LD++VIGQE AKK AV+NHYKR+ H
Sbjct: 61 VPTPREISKVLDDYVIGQEHAKKV---------------LAVAVHNHYKRLAH------- 98
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G K+G VE+ KSN++L+GPTGSGKTLLA+TLARI++VPF
Sbjct: 99 -------------GGKAGE--------VEIAKSNIMLVGPTGSGKTLLAQTLARILDVPF 137
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 138 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 197
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFI GGAF GLEK I
Sbjct: 198 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTSNILFIVGGAFAGLEKII 255
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+ + + S IG+GA VR D ++L V+ DL+ +GLIPEFIGR P++ +
Sbjct: 256 AAKGKGSGIGYGAEVRG-------PDERRAGAILREVEPEDLLKFGLIPEFIGRLPVIAT 308
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+++L +PKNAL +QY+++F M KL FTDDAL+ +A +A+ + TGARGLR
Sbjct: 309 LEDLDEKALIEILTKPKNALLKQYQRLFEMEATKLSFTDDALKSVANRAIQRKTGARGLR 368
Query: 431 ALLENILTEAMFEIP 445
+++E+IL M+++P
Sbjct: 369 SIMESILLSTMYDLP 383
>gi|333370326|ref|ZP_08462337.1| ATP-dependent Clp protease ATP-binding subunit [Desmospora sp.
8437]
gi|332978058|gb|EGK14796.1| ATP-dependent Clp protease ATP-binding subunit [Desmospora sp.
8437]
Length = 423
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 192/376 (51%), Positives = 255/376 (67%), Gaps = 54/376 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LP P+EI LDE+VIGQE+AKKS AVYNHYKRI
Sbjct: 63 NLPKPQEINAILDEYVIGQEQAKKS---------------LSVAVYNHYKRI-------- 99
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N + ++D+ VEL+KSN++++GPTGSGKTLLA+T+A+I+NVP
Sbjct: 100 -------------------NSSHKSDD-VELQKSNIIMIGPTGSGKTLLAQTMAKILNVP 139
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A+RGI+YIDE+DK+ K+E+ +
Sbjct: 140 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAERGIIYIDEIDKVARKSENPSIT 199
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILF+CGGAF GLE
Sbjct: 200 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTGNILFVCGGAFDGLEPI 257
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R IGFGA TD L L+ V DL+ +GLIPEF+GR P++
Sbjct: 258 IKRRIGKKVIGFGADSN--------TDDLKQGEYLKMVLPEDLLRFGLIPEFVGRLPVIS 309
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L++D LV++L EPKNAL +QY+K+ M++VKL F +DAL+ IA +A+ +NTGARGL
Sbjct: 310 TLEPLDQDALVRILTEPKNALVKQYQKLLEMDDVKLTFEEDALKAIADEAIRRNTGARGL 369
Query: 430 RALLENILTEAMFEIP 445
RA++E+I+ + MF++P
Sbjct: 370 RAIIESIMLDVMFDLP 385
>gi|227113466|ref|ZP_03827122.1| ATP-dependent protease ATP-binding subunit ClpX [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
gi|403057520|ref|YP_006645737.1| ATP-dependent protease ATP-binding subunit [Pectobacterium
carotovorum subsp. carotovorum PCC21]
gi|402804846|gb|AFR02484.1| ATP-dependent protease ATP-binding subunit [Pectobacterium
carotovorum subsp. carotovorum PCC21]
Length = 424
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 194/402 (48%), Positives = 262/402 (65%), Gaps = 59/402 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI + LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRRHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N ++ +EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 --------------------NGDSSNGIELGKSNILLIGPTGSGKTLLAETLARFLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQDS--SIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
E+R D+ IGF A V+ G D LL +V+ GDL+ +GLIPEFIGR P++
Sbjct: 259 -EQRTDTGRGIGFNATVK------GSADKATEGELLSNVEPGDLIKFGLIPEFIGRLPVV 311
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E+ L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKKAMA+ TGARG
Sbjct: 312 ATLRELSEEALIQILREPKNALTKQYQALFNLEGVELEFRDEALTAIAKKAMARKTGARG 371
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E L + M+++P + SV+ V++D+ + P
Sbjct: 372 LRSIVEAALLDTMYDLPSLE----SVDKVVIDESVIAGQSEP 409
>gi|254514392|ref|ZP_05126453.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [gamma
proteobacterium NOR5-3]
gi|219676635|gb|EED33000.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [gamma
proteobacterium NOR5-3]
Length = 428
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 197/408 (48%), Positives = 257/408 (62%), Gaps = 55/408 (13%)
Query: 58 ENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYN 117
E N EG LP P+EI LDE+VIGQ+RAKK AVYN
Sbjct: 52 EEVQENAAEEGEEKLPVPEEINGILDEYVIGQQRAKKV---------------LSVAVYN 96
Query: 118 HYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKT 177
HYKR+ H G KSG+ VEL KSN+LL+GPTGSGKT
Sbjct: 97 HYKRLRHG-------------------GSKSGD--------VELGKSNILLVGPTGSGKT 129
Query: 178 LLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEV 237
LLA+TLAR+++VPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+
Sbjct: 130 LLAETLARLLDVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQVGIVYIDEI 189
Query: 238 DKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDIL 296
DKI K+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT IL
Sbjct: 190 DKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSSIL 247
Query: 297 FICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYG 356
FICGGAF GL+K I +R + IGFGA V + + + L ++ DLV YG
Sbjct: 248 FICGGAFAGLDKVIRDRSEKGGIGFGAEVHSKDAKRNVGEVLF------DLEPEDLVQYG 301
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
LIPEF+GR P++ +L L+ LVQ+L EP+N+L +QY K+F M V++ F +D LR +A
Sbjct: 302 LIPEFVGRLPVIATLEELDVPALVQILTEPRNSLTKQYSKLFEMEGVEIDFREDGLRAVA 361
Query: 417 KKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+KAM + TGARGLR++LE +L + M+ IP V V+VD+ +
Sbjct: 362 EKAMERKTGARGLRSILEGVLLDTMYSIP----SRDDVAKVVVDESVI 405
>gi|377809581|ref|YP_005004802.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pediococcus
claussenii ATCC BAA-344]
gi|361056322|gb|AEV95126.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pediococcus
claussenii ATCC BAA-344]
Length = 419
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 190/395 (48%), Positives = 258/395 (65%), Gaps = 55/395 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+PTP +I + L+++VIGQE AKK+ AVYNHYKRI +Q
Sbjct: 63 DVPTPNDIVEHLNQYVIGQEEAKKT---------------LSVAVYNHYKRINQMEVQ-- 105
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
E+++ EL+KSN+ L+GPTGSGKT LA++LA+I+NVP
Sbjct: 106 -----------------------EDEDAPELQKSNISLIGPTGSGKTFLAQSLAKILNVP 142
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT LT+AGYVGED E++L KLL AD++VE A+RGI+YIDE+DKI K+E+ +
Sbjct: 143 FAIADATTLTEAGYVGEDVENILLKLLQNADYNVEQAERGIIYIDEIDKIAKKSENVSIT 202
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT NVP P G RKHP+ + I IDT +ILFI GGAF G+E
Sbjct: 203 RDVSGEGVQQALLKILEGTTANVP-PQGG-RKHPQQEFIQIDTTNILFIVGGAFDGIETI 260
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ R D +IGFG+ + + +SL++ V DL+ +GLIPEFIGR PIL
Sbjct: 261 VKNRLGDKTIGFGSNSKTQLDE--------EASLMQQVVPEDLLKFGLIPEFIGRLPILT 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L + LV++L EPKNAL +QY+ + +++V LHFT AL+ IA +A+A++TGARGL
Sbjct: 313 ALEKLTTEDLVRILTEPKNALVKQYEALMKLDSVDLHFTTQALKAIADRAIARDTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
R+++EN++ + MFEIP V V+V+K+ V
Sbjct: 373 RSIIENVMRDIMFEIP----SRDDVERVIVNKKTV 403
>gi|269914470|pdb|3HTE|A Chain A, Crystal Structure Of Nucleotide-Free Hexameric Clpx
gi|269914471|pdb|3HTE|B Chain B, Crystal Structure Of Nucleotide-Free Hexameric Clpx
gi|269914472|pdb|3HTE|C Chain C, Crystal Structure Of Nucleotide-Free Hexameric Clpx
gi|269914473|pdb|3HTE|D Chain D, Crystal Structure Of Nucleotide-Free Hexameric Clpx
gi|269914474|pdb|3HTE|E Chain E, Crystal Structure Of Nucleotide-Free Hexameric Clpx
gi|269914475|pdb|3HTE|F Chain F, Crystal Structure Of Nucleotide-Free Hexameric Clpx
Length = 363
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 259/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 3 LPTPHEIRNHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 39
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + N VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 40 ------------------NGDTSNG--VELGKSNILLIGPTGSGKTLLAETLARLLDVPF 79
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYID++DKI K+++ + R
Sbjct: 80 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISRKSDNPSITR 139
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 140 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 197
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S R + S IGFGA V+A +D LL V+ DL+ +GLIPEFIGR P++
Sbjct: 198 SHRVETGSGIGFGATVKAK------SDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVA 251
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY+ +F++ V L F D+AL IAKKAMA+ TGARGL
Sbjct: 252 TLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGL 311
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P + V V++D+ + P
Sbjct: 312 RSIVEAALLDTMYDLPSME----DVEKVVIDESVIDGQSKP 348
>gi|237730415|ref|ZP_04560896.1| ATP-dependent Clp protease ATP-binding subunit clpX [Citrobacter
sp. 30_2]
gi|283834243|ref|ZP_06353984.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Citrobacter
youngae ATCC 29220]
gi|365104950|ref|ZP_09334342.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Citrobacter
freundii 4_7_47CFAA]
gi|395228095|ref|ZP_10406419.1| ATP-dependent Clp protease ATP-binding subunit clpX [Citrobacter
sp. A1]
gi|421843722|ref|ZP_16276882.1| ATP-dependent protease ATP-binding subunit ClpX [Citrobacter
freundii ATCC 8090 = MTCC 1658]
gi|424730592|ref|ZP_18159187.1| atp-dependent clp protease atp-binding subunit [Citrobacter sp.
L17]
gi|226905954|gb|EEH91872.1| ATP-dependent Clp protease ATP-binding subunit clpX [Citrobacter
sp. 30_2]
gi|291069763|gb|EFE07872.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Citrobacter
youngae ATCC 29220]
gi|363643891|gb|EHL83195.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Citrobacter
freundii 4_7_47CFAA]
gi|394718217|gb|EJF23854.1| ATP-dependent Clp protease ATP-binding subunit clpX [Citrobacter
sp. A1]
gi|411775443|gb|EKS58889.1| ATP-dependent protease ATP-binding subunit ClpX [Citrobacter
freundii ATCC 8090 = MTCC 1658]
gi|422894785|gb|EKU34592.1| atp-dependent clp protease atp-binding subunit [Citrobacter sp.
L17]
gi|455641802|gb|EMF20973.1| ATP-dependent protease ATP-binding subunit ClpX [Citrobacter
freundii GTC 09479]
Length = 424
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 259/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ R + S IGFGA V+A +D LL V+ DL+ +GLIPEFIGR P++
Sbjct: 259 ANRVETGSGIGFGATVKAQ------SDKASEGELLSQVEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+LS L+E+ L+Q+L EPKNAL +QY+ +F++ V L F ++AL IAKKAMA+ TGARGL
Sbjct: 313 TLSELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFREEALDAIAKKAMARKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P + V V++D+ +G P
Sbjct: 373 RSIVEAALLDTMYDLPSME----DVEKVVIDESVIGGQSKP 409
>gi|296270439|ref|YP_003653071.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Thermobispora
bispora DSM 43833]
gi|296093226|gb|ADG89178.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermobispora
bispora DSM 43833]
Length = 427
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 190/395 (48%), Positives = 261/395 (66%), Gaps = 55/395 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LP P+EI + LD +V+GQ++AKK+ AVYNHYKRI
Sbjct: 60 NLPKPREIYEFLDSYVVGQDKAKKA---------------LSVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+SGN D+ +EL KSN+LL+GPTGSGKTLLA+TLA+++NVP
Sbjct: 97 ----------------QSGN--RARDDGLELAKSNILLLGPTGSGKTLLAQTLAKMLNVP 138
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DATALT+AGYVGED E++L KL+ AAD+DV+ A+ GI+YIDEVDKI K+E+ +
Sbjct: 139 FAIADATALTEAGYVGEDVENILLKLIQAADYDVKKAETGIIYIDEVDKIARKSENPSIT 198
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT +VP P G RKHP + I IDT ++LFICGGAF GLEK
Sbjct: 199 RDVSGEGVQQALLKILEGTTASVP-PQGG-RKHPHQEFIQIDTTNVLFICGGAFAGLEKI 256
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I +R IGF A +R+ + + +S + V DL+ YG+IPEF+GR P++
Sbjct: 257 IEQRIGKKGIGFNAVLRSR-------EEMDSSDIFAEVMPEDLLKYGMIPEFVGRLPVIT 309
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
S+ L+ + L+Q+L +PKNAL +QY+++F ++NV+L FTDDAL IA +A+ + TGARGL
Sbjct: 310 SVHNLDRNALIQILTKPKNALVKQYRRLFELDNVELEFTDDALEAIADQAILRGTGARGL 369
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
RA++E +L M+E+P + + V++ +E V
Sbjct: 370 RAIMEEVLLSVMYEVPSRQ----DIARVVITREVV 400
>gi|269792563|ref|YP_003317467.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100198|gb|ACZ19185.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermanaerovibrio acidaminovorans DSM 6589]
Length = 429
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 193/400 (48%), Positives = 255/400 (63%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P P E+ LD++VIGQ++AKK AVYNHY+RI
Sbjct: 73 VPRPDEMKAFLDQYVIGQDQAKKV---------------LSVAVYNHYRRITAGP----- 112
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+D+ VEL KSNVLL+GPTGSGKTLLA+TLAR++ VPF
Sbjct: 113 -----------------------SDDQVELPKSNVLLVGPTGSGKTLLAQTLARLLKVPF 149
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L +LL AAD+DV+AA+RGI+YIDE+DKI K+ES + R
Sbjct: 150 AIADATTLTEAGYVGEDVENILVRLLQAADYDVKAAERGIIYIDEIDKISRKSESPSITR 209
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALL++LEGTV NV P G RKHP D I +DTK+ILFICGGAF GLE I
Sbjct: 210 DVSGEGVQQALLRILEGTVSNV--PPKGGRKHPNQDFIQVDTKNILFICGGAFDGLEPII 267
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+ R + IGFG + D +SL + + D + YG IPEF+GR P++V
Sbjct: 268 ARRTRKKVIGFGGDI------ASAKDLEKRNSLYRELVADDFITYGFIPEFVGRLPVIVP 321
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L +L+E+ LV++L EPKNAL RQY+++F M+ V L FT +A+R IA+KAM + TGAR LR
Sbjct: 322 LDSLDEEALVRILQEPKNALVRQYQRIFEMDRVNLEFTPEAIRAIARKAMERKTGARALR 381
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+++E I+ + M+E+P S V V++ ++ V AP
Sbjct: 382 SIMEGIMLDLMYEMPSK---ASQVGRVVIGEDVVNGQGAP 418
>gi|220909725|ref|YP_002485036.1| ATP-dependent protease ATP-binding subunit ClpX [Cyanothece sp. PCC
7425]
gi|219866336|gb|ACL46675.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cyanothece
sp. PCC 7425]
Length = 447
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 262/401 (65%), Gaps = 46/401 (11%)
Query: 50 GIESESETENGNRNRNSEGNI-DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
G E+ + R+R + ++ +P P+EI K LD+ VIGQ+ AKK I +
Sbjct: 58 GRRRETPADKPRRSRPPQVSLSQIPKPREIKKYLDDHVIGQQEAKK--ILSV-------- 107
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKR+ S+L K G ++ VEL+KSN+LL
Sbjct: 108 -----AVYNHYKRL-----------------SLLQEQSKGGA-----EDAVELQKSNILL 140
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTG GKTLLA+TLAR+++VPF + DAT LT+AGYVGED E++L +LL +D DVE AQ
Sbjct: 141 IGPTGCGKTLLAQTLARMLDVPFAVADATTLTEAGYVGEDVENILLRLLQVSDLDVEQAQ 200
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
RGI+YIDE+DKI K+E+ + RDVSGEGVQQALLKMLEGTV NVP P G RKHP D
Sbjct: 201 RGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVP-PQGG-RKHPYQDC 258
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESV 347
I IDT +ILFICGGAFVGLEK + +R ++GF VR + G T+ L+ +
Sbjct: 259 IQIDTTNILFICGGAFVGLEKIVEQRTGKKAMGF---VREDGEPQGKEQR--TADTLKHL 313
Query: 348 DSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHF 407
+ DLV +G+IPEFIGR P+L + L+E+ L ++L EP+NAL +QY+K+ M+NV+L F
Sbjct: 314 EPEDLVKFGMIPEFIGRIPVLAVVDPLDEEALSEILTEPRNALVKQYQKLLKMDNVQLEF 373
Query: 408 TDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETK 448
DA+R IA++A + TGAR LRA++E I+ + M+E+P K
Sbjct: 374 KPDAIRAIAQEAYRRKTGARALRAIVEEIMLDVMYELPSRK 414
>gi|118443245|ref|YP_878862.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium novyi
NT]
gi|229889851|sp|A0Q2L0.1|CLPX_CLONN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|118133701|gb|ABK60745.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
novyi NT]
Length = 431
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 194/394 (49%), Positives = 263/394 (66%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKRI
Sbjct: 60 LPKPSEIKNYLDDYVIGQDSAKKA---------------LAVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N +V+ D+ VEL+KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 96 ------------------NSDVDVDD-VELQKSNILLLGPTGSGKTLLAQTLARLLNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E++L KL+ AD+D+E A+RGI+YIDE+DKI K+E+ + R
Sbjct: 137 AMADATTLTEAGYVGEDVENILLKLIQNADYDIEKAERGIIYIDEIDKIARKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV +VP P G RKHP + I I+T +ILFICGGAF GL+K I
Sbjct: 197 DVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQINTSNILFICGGAFDGLDKII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + SS+GFG+ V++ + L ESV DL+ +GLIPEFIGR PI+V+
Sbjct: 255 EKRTRKSSLGFGSTVQSKEEKD------IGELLKESVPE-DLLKFGLIPEFIGRLPIMVT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L +L+ LV++L EPKNAL +QYKK+ M+NV+L F D+AL+ IA +A+ + TGARGLR
Sbjct: 308 LQSLDNSALVRILKEPKNALVKQYKKLLLMDNVELEFEDEALKAIADEAIERKTGARGLR 367
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E + + MF+IP ++ V+++K+ +
Sbjct: 368 SIIEETMRDIMFDIP----SQFNIKKVIINKDTI 397
>gi|158423233|ref|YP_001524525.1| ATP-dependent protease ATP-binding subunit ClpX [Azorhizobium
caulinodans ORS 571]
gi|172047857|sp|A8HYF4.1|CLPX_AZOC5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|158330122|dbj|BAF87607.1| ATP-dependent Clp protease ATP-binding subunit [Azorhizobium
caulinodans ORS 571]
Length = 422
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 200/397 (50%), Positives = 262/397 (65%), Gaps = 62/397 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPKEI K LD++VIGQ+ AKK AV+NHYKR+ H++
Sbjct: 63 IPTPKEIRKVLDDYVIGQDHAKKV---------------LSVAVHNHYKRLNHAT----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G+ VEL KSN++L+GPTGSGKTLLA+TLARI++VPF
Sbjct: 103 ---------------KHGD--------VELAKSNIMLIGPTGSGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 257
Query: 311 SERRQ-DSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPI 367
S R + +SIGFGA V R G L V+ DL+ YGLIPEFIGR P+
Sbjct: 258 SSRSKGGTSIGFGAKVAPVEERRPG---------ELFREVEPEDLLKYGLIPEFIGRLPV 308
Query: 368 LVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGAR 427
L +L+ L+E L Q+L EPKNAL +QY+++F M NV L ++AL IA+KA+ + TGAR
Sbjct: 309 LATLNDLDEAALKQILAEPKNALVKQYQRLFEMENVDLTIHEEALGAIARKAIERKTGAR 368
Query: 428 GLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
GLR+++E IL + MF++P G V V++ KE V
Sbjct: 369 GLRSIMEGILLDTMFDLP----GLEGVEEVVISKEVV 401
>gi|90419400|ref|ZP_01227310.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Aurantimonas
manganoxydans SI85-9A1]
gi|90336337|gb|EAS50078.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Aurantimonas
manganoxydans SI85-9A1]
Length = 422
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 190/375 (50%), Positives = 254/375 (67%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI LD++VIGQ AKK AV+NHYKR+ H++
Sbjct: 63 VPTPQEIIAVLDDYVIGQSFAKKV---------------LSVAVHNHYKRLAHAA----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KS + VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ---------------KSND--------VELAKSNILLIGPTGCGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTANILFICGGAFAGLDKII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S+R + +SIGF A V D T + V+ DL+ +GLIPEF+GR P+L +
Sbjct: 258 SDRGRKTSIGFAANVAG-------PDDRRTGDVFRQVEPEDLLKFGLIPEFVGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E LVQ+L EPKNAL +QY+++F M NV+L F +DALR IA+KA+ + TGARGLR
Sbjct: 311 LEDLDEAALVQILEEPKNALVKQYQRLFEMENVELSFHEDALRAIARKAIERKTGARGLR 370
Query: 431 ALLENILTEAMFEIP 445
+++E +L + MF++P
Sbjct: 371 SIMEAMLLDTMFDLP 385
>gi|443320139|ref|ZP_21049260.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Gloeocapsa
sp. PCC 73106]
gi|442790135|gb|ELR99747.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Gloeocapsa
sp. PCC 73106]
Length = 446
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 199/420 (47%), Positives = 265/420 (63%), Gaps = 50/420 (11%)
Query: 46 GESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDML 105
+S ++ + G + + S I P P+EI LDE VIGQE AKK
Sbjct: 55 AQSTAGDTTTTKRRGTQEQFSHNQI--PKPREIKDFLDEHVIGQETAKK----------- 101
Query: 106 VYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSN 165
V+ AVYNHYKR+ SI S + N +++ VEL+KSN
Sbjct: 102 --VLSV--AVYNHYKRL-----------------SICQSQKQDKN---PSEDSVELQKSN 137
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL+GPTG GKTLLA+TLA+I++VPF + DAT LT+AGYVGED E++L +LL AD DVE
Sbjct: 138 ILLIGPTGCGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLLQVADLDVE 197
Query: 226 AAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPR 284
AQRGI+YIDE+DK+ K+E+ + RDVSGEGVQQALLKMLEGT+ NVP P G RKHP
Sbjct: 198 EAQRGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKMLEGTIANVP-PQGG-RKHPY 255
Query: 285 GDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLL 344
D I IDT +ILFICGGAFVGL+K I +R SIGF P + D LL
Sbjct: 256 QDCIQIDTSNILFICGGAFVGLDKIIEQRIGRKSIGFIHPGENPSKEKRALD------LL 309
Query: 345 ESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVK 404
S++ DLV +G+IPEF+GR P++ SL +L+E+ L+ +L +P+NAL +QY+K+ M+NV
Sbjct: 310 TSLEPDDLVKFGMIPEFVGRIPVMASLESLDEEALIAILTKPRNALVKQYQKLLQMDNVS 369
Query: 405 LHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
L F DA+R IA++A + TGAR LR ++E I+ E M+E+P + V ++ KE V
Sbjct: 370 LEFKPDAIRAIAQEAYRRKTGARALRGIVEEIMLEVMYELPSCR----DVKECIITKEMV 425
>gi|343504825|ref|ZP_08742499.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
ichthyoenteri ATCC 700023]
gi|343510912|ref|ZP_08748103.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio scophthalmi
LMG 19158]
gi|343517339|ref|ZP_08754345.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio sp. N418]
gi|342793663|gb|EGU29453.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio sp. N418]
gi|342799858|gb|EGU35408.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio scophthalmi
LMG 19158]
gi|342810441|gb|EGU45524.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
ichthyoenteri ATCC 700023]
Length = 426
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 258/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P+EI + LD++VIGQ+ AKK AVYNHYKR+
Sbjct: 64 LPKPREIREHLDDYVIGQDYAKKV---------------LAVAVYNHYKRL--------- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 100 ---------------RNGDTTSEG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 259
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA VR+ + L + V+ DLV YGLIPEFIGR P+
Sbjct: 260 DQRVATGAGIGFGAEVRSK------DENKTVGELFKQVEPEDLVKYGLIPEFIGRLPVTT 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY +F + + +L F +DALR IAKKAM + TGARGL
Sbjct: 314 TLTELDEEALIQILCEPKNALTKQYAALFELEDSELEFREDALRAIAKKAMDRKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P +V+ V++D+ + P
Sbjct: 374 RSILEAVLLETMYELP----SMDNVSKVVIDESVINGESEP 410
>gi|261253458|ref|ZP_05946031.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|417955961|ref|ZP_12598959.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio orientalis
CIP 102891 = ATCC 33934]
gi|260936849|gb|EEX92838.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|342811481|gb|EGU46518.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio orientalis
CIP 102891 = ATCC 33934]
Length = 427
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 255/401 (63%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P++I + LD++VIGQ+ AKK AVYNHYKR+
Sbjct: 65 LPVPRDIREHLDDYVIGQDYAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 ---------------RNGDTTSEG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGF A VR+ T L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVATGTGIGFAAEVRSKDETK------TVGELFTQVEPEDLVKYGLIPEFIGRLPVTT 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+ED L+Q+L EPKNAL +QY +F + + +L F +DALR IAKKAM + TGARGL
Sbjct: 315 TLTELDEDALIQILCEPKNALTKQYAALFELEDAELEFREDALRAIAKKAMERKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P V+ V++D+ + P
Sbjct: 375 RSILEGVLLETMYELP----SMDDVSKVVIDESVIKGESDP 411
>gi|157146945|ref|YP_001454264.1| ATP-dependent protease ATP-binding subunit ClpX [Citrobacter koseri
ATCC BAA-895]
gi|166214770|sp|A8AK15.1|CLPX_CITK8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|157084150|gb|ABV13828.1| hypothetical protein CKO_02722 [Citrobacter koseri ATCC BAA-895]
Length = 424
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 259/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ R + S IGFGA V+A +D LL V+ DL+ +GLIPEFIGR P++
Sbjct: 259 ANRVETGSGIGFGATVKAK------SDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY+ +F++ V L F D+AL IAKKAMA+ TGARGL
Sbjct: 313 TLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P + V V++D+ +G P
Sbjct: 373 RSIVEAALLDTMYDLPSME----DVEKVVIDESVIGGQSKP 409
>gi|410479151|ref|YP_006766788.1| ATP-dependent protease Clp, ATPase [Leptospirillum ferriphilum
ML-04]
gi|424867690|ref|ZP_18291470.1| ClpX, ATPase regulatory subunit [Leptospirillum sp. Group II 'C75']
gi|124514480|gb|EAY55993.1| ATP-dependent Clp protease, ATP-binding subunit [Leptospirillum
rubarum]
gi|387221744|gb|EIJ76257.1| ClpX, ATPase regulatory subunit [Leptospirillum sp. Group II 'C75']
gi|406774403|gb|AFS53828.1| ATP-dependent protease Clp, ATPase subunit [Leptospirillum
ferriphilum ML-04]
Length = 426
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 260/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
L P EI + LD++V+GQE+AK+ AVYNHYKRI
Sbjct: 64 LLKPAEINRILDQYVVGQEKAKRV---------------LSVAVYNHYKRI--------- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N N +D+ VEL+K N+L++GPTG+GKTLLA+TLARI+ VPF
Sbjct: 100 ------------------NANQISDD-VELQKGNILMIGPTGTGKTLLAQTLARILEVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E+++ KLL AAD+DVE A+RGIVYIDE+DKI K+E+ + R
Sbjct: 141 AIADATTLTEAGYVGEDVENIILKLLQAADYDVEKAERGIVYIDEIDKISRKSENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV NVP P G RKHP + I +DT +ILFICGGAF+GL+ I
Sbjct: 201 DVSGEGVQQALLKLVEGTVANVP-PQGG-RKHPHQEFIQVDTSNILFICGGAFIGLDNII 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S+R ++GFGA +R D T LL +V DL+ YGLIPEF+GRFP++
Sbjct: 259 SQRLSSKNLGFGAEIRTP------EDRKRTGELLANVRPDDLLKYGLIPEFVGRFPVMAV 312
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E ++L EPKNAL +Q++K+F++ V+L T+ AL+ IA KA + TGARGLR
Sbjct: 313 LDDLDEAAFYRILTEPKNALVKQFEKLFALEKVRLRMTEGALKAIAHKAFIQKTGARGLR 372
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPG 471
A+LE ++ + M+EIP + +V VLV +E + + + PG
Sbjct: 373 AILEEVMLDLMYEIPSVQ----NVLEVLVTEETINNHEPPG 409
>gi|269914476|pdb|3HWS|A Chain A, Crystal Structure Of Nucleotide-Bound Hexameric Clpx
gi|269914477|pdb|3HWS|B Chain B, Crystal Structure Of Nucleotide-Bound Hexameric Clpx
gi|269914478|pdb|3HWS|C Chain C, Crystal Structure Of Nucleotide-Bound Hexameric Clpx
gi|269914479|pdb|3HWS|D Chain D, Crystal Structure Of Nucleotide-Bound Hexameric Clpx
gi|269914480|pdb|3HWS|E Chain E, Crystal Structure Of Nucleotide-Bound Hexameric Clpx
gi|269914481|pdb|3HWS|F Chain F, Crystal Structure Of Nucleotide-Bound Hexameric Clpx
Length = 363
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 259/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 3 LPTPHEIRNHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 39
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + N VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 40 ------------------NGDTSNG--VELGKSNILLIGPTGSGKTLLAETLARLLDVPF 79
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYID++DKI K+++ + R
Sbjct: 80 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISRKSDNPSITR 139
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 140 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 197
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S R + S IGFGA V+A +D LL V+ DL+ +GLIPEFIGR P++
Sbjct: 198 SHRVETGSGIGFGATVKAK------SDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVA 251
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY+ +F++ V L F D+AL IAKKAMA+ TGARGL
Sbjct: 252 TLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGL 311
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P + V V++D+ + P
Sbjct: 312 RSIVEAALLDTMYDLPSME----DVEKVVIDESVIDGQSEP 348
>gi|417674454|ref|ZP_12323887.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
dysenteriae 155-74]
gi|420345497|ref|ZP_14846929.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 965-58]
gi|332085738|gb|EGI90902.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
dysenteriae 155-74]
gi|391276381|gb|EIQ35153.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 965-58]
Length = 424
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 258/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDTSNGVELSKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S R + S IGFGA V+A +D LL V+ DL+ +GLIPEFIGR P++
Sbjct: 259 SHRVETGSGIGFGATVKAK------SDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY+ +F++ V L F D+AL IAKKAMA+ TGARGL
Sbjct: 313 TLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P + V V++D+ + P
Sbjct: 373 RSIVEAALLDTMYDLPSME----DVEKVVIDESVIDGQSKP 409
>gi|332529293|ref|ZP_08405255.1| ATP-dependent protease ATP-binding subunit ClpX [Hylemonella
gracilis ATCC 19624]
gi|332041210|gb|EGI77574.1| ATP-dependent protease ATP-binding subunit ClpX [Hylemonella
gracilis ATCC 19624]
Length = 421
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 196/404 (48%), Positives = 258/404 (63%), Gaps = 55/404 (13%)
Query: 68 GNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSL 127
G LPTP EI LD +VIGQ+ AK++ AVYNHYKR+ H
Sbjct: 61 GRGSLPTPAEIKANLDNYVIGQDAAKRT---------------LAVAVYNHYKRLQHKET 105
Query: 128 QKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIV 187
++ DE VEL KSN+LL+GPTGSGKTLLA+TLAR +
Sbjct: 106 ARK-------------------------DE-VELAKSNILLIGPTGSGKTLLAQTLARQL 139
Query: 188 NVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESR 246
NVPF + DAT LT+AGYVGED E+++ KLL +++VE AQRGIVYIDE+DKI K+++
Sbjct: 140 NVPFVMADATTLTEAGYVGEDVENIIAKLLQNCNYEVEKAQRGIVYIDEIDKISRKSDNP 199
Query: 247 NNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGL 306
+ RDVSGEGVQQALLK++EGT+ +VP P G RKHP D I +DT +ILFICGGAF GL
Sbjct: 200 SITRDVSGEGVQQALLKLIEGTMASVP-PQGG-RKHPNQDFIQVDTTNILFICGGAFAGL 257
Query: 307 EKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFP 366
EK I R + S IGFGA V++ + LT+ + + V+ DL+ YGLIPE +GR P
Sbjct: 258 EKVIERRTESSGIGFGAAVKSKTQR-SLTE------VFKEVEPEDLIKYGLIPELVGRMP 310
Query: 367 ILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGA 426
++ +L+ L+ED LVQ+L EPKNAL +QY K+F M V+L AL IAKK++A+ TGA
Sbjct: 311 VVATLAELSEDALVQILTEPKNALVKQYAKLFGMEGVELEIRPTALAAIAKKSLARKTGA 370
Query: 427 RGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RGLR+++E L + MF++P S+V V+VD+ + P
Sbjct: 371 RGLRSIMEQSLIDTMFDLP----TLSNVEKVVVDESTIEEHKPP 410
>gi|345864968|ref|ZP_08817162.1| ATP-dependent Clp protease ATP-binding subunit ClpX [endosymbiont
of Tevnia jerichonana (vent Tica)]
gi|345878325|ref|ZP_08830044.1| ATP-dependent Clp protease ATP-binding subunit clpX [endosymbiont
of Riftia pachyptila (vent Ph05)]
gi|344224680|gb|EGV51064.1| ATP-dependent Clp protease ATP-binding subunit clpX [endosymbiont
of Riftia pachyptila (vent Ph05)]
gi|345123906|gb|EGW53792.1| ATP-dependent Clp protease ATP-binding subunit ClpX [endosymbiont
of Tevnia jerichonana (vent Tica)]
Length = 425
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 203/439 (46%), Positives = 274/439 (62%), Gaps = 65/439 (14%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E+G ++ +S LP P EI K LD++VIGQ+RAKK
Sbjct: 47 NDIIREEMHESGEKSSDS-----LPRPHEINKTLDQYVIGQQRAKKV------------- 88
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKR+ SL KE SD +EL KSN+LL
Sbjct: 89 --LSVAVYNHYKRL--ESLGKE--SD------------------------IELAKSNILL 118
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR+++VPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ
Sbjct: 119 IGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQ 178
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
GIVYIDE+DKI K+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ +
Sbjct: 179 TGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEF 236
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESV 347
+ +DT +ILFI GGAF GLEK I +R + IGF A V + +A ++ V
Sbjct: 237 LQVDTSNILFIVGGAFSGLEKVIKDRSEKGGIGFSAEVHSK------DEARSVGEIIVDV 290
Query: 348 DSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHF 407
+ DL+ YGLIPEF+GR P++ +L L+ED LV++L EPKNAL +QY ++F M +L
Sbjct: 291 EPEDLIKYGLIPEFVGRLPVVATLQELDEDSLVKILTEPKNALTKQYGRLFEMEGCELEI 350
Query: 408 TDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSV 467
DALR IA KAM + TGARGLR +LE +L + M+++P +V+ V++D+ +
Sbjct: 351 RADALRAIAGKAMERKTGARGLRTILEQVLLDTMYDLP----SMDNVSKVVLDESVIAGE 406
Query: 468 DAPGCGAKILHGDGELERV 486
P +++G GE +++
Sbjct: 407 TEP----LMIYGGGEQQQI 421
>gi|264677388|ref|YP_003277294.1| ATP-dependent Clp protease ATP-binding subunit [Comamonas
testosteroni CNB-2]
gi|262207900|gb|ACY31998.1| ATP-dependent Clp protease, ATP-binding subunit [Comamonas
testosteroni CNB-2]
Length = 420
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 188/380 (49%), Positives = 247/380 (65%), Gaps = 51/380 (13%)
Query: 67 EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSS 126
EG DLPTP EI LD +VIGQE+AK++ AVYNHYKR+ H
Sbjct: 59 EGRGDLPTPAEIKANLDNYVIGQEQAKRT---------------LAVAVYNHYKRLNHKD 103
Query: 127 LQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARI 186
K+G +VE L KSN+LL+GPTGSGKTLLA+TLAR
Sbjct: 104 --------------------KAGKDDVE------LSKSNILLIGPTGSGKTLLAQTLARQ 137
Query: 187 VNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAES 245
+NVPF + DAT LT+AGYVGED E+++ KLL + ++DVE AQRGIVYIDE+DKI K+++
Sbjct: 138 LNVPFVMADATTLTEAGYVGEDVENIIQKLLQSCEYDVERAQRGIVYIDEIDKISRKSDN 197
Query: 246 RNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVG 305
+ RDVSGEGVQQALLK++EGT+ + IP G RKHP D + IDT +ILFIC GAF G
Sbjct: 198 PSITRDVSGEGVQQALLKLIEGTMAS--IPPQGGRKHPNQDFLQIDTTNILFICSGAFAG 255
Query: 306 LEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRF 365
LEK I R + S IGFGA V++ + S + ++ DL+ +G+IPE +GR
Sbjct: 256 LEKVIENRTEASGIGFGATVKSKKQRS-------ISEMFLEIEPEDLIKFGIIPELVGRM 308
Query: 366 PILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTG 425
P++ +L+ L+ED LVQ+L EPKNAL +QY K+ +M V+L AL+ IA+KA+A+ TG
Sbjct: 309 PVVTALAELSEDALVQILTEPKNALVKQYSKLLAMEGVELEIRPAALKAIARKALARKTG 368
Query: 426 ARGLRALLENILTEAMFEIP 445
ARGLR+++E L MFE+P
Sbjct: 369 ARGLRSIVEQALISTMFELP 388
>gi|238764859|ref|ZP_04625800.1| ATP-dependent Clp protease ATP-binding subunit clpX [Yersinia
kristensenii ATCC 33638]
gi|238696966|gb|EEP89742.1| ATP-dependent Clp protease ATP-binding subunit clpX [Yersinia
kristensenii ATCC 33638]
Length = 423
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 196/412 (47%), Positives = 261/412 (63%), Gaps = 62/412 (15%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
+R R+S LPTP EI + LD++VIGQE AKK AVYNHYK
Sbjct: 58 HRERSS-----LPTPHEIRRHLDDYVIGQEPAKKV---------------LAVAVYNHYK 97
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
R+ N + +EL KSN+LL+GPTGSGKTLLA
Sbjct: 98 RLR----------------------------NGDTSNGIELGKSNILLIGPTGSGKTLLA 129
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+TLAR ++VPFT+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI
Sbjct: 130 ETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKI 189
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K+++ + RDVSGEGVQQALLK++EGT+ VP P G RKHP+ + + +DT ILFIC
Sbjct: 190 SRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQVDTSKILFIC 247
Query: 300 GGAFVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLI 358
GGAF GL+K I +R + IGFGA V+ G ++ LL + DL+ +GLI
Sbjct: 248 GGAFAGLDKVIGQRINTGTGIGFGATVK------GKSEKATEGELLSQAEPEDLIKFGLI 301
Query: 359 PEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKK 418
PEFIGR P++ +LS L+ED L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKK
Sbjct: 302 PEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFNLEGVELEFRDEALTAIAKK 361
Query: 419 AMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
AM + TGARGLR+++E L + M+++P SV V+VD+ + AP
Sbjct: 362 AMVRKTGARGLRSIVEGALLDTMYDLP----SMDSVEKVVVDESVIAGQSAP 409
>gi|107101234|ref|ZP_01365152.1| hypothetical protein PaerPA_01002267 [Pseudomonas aeruginosa PACS2]
Length = 426
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 195/400 (48%), Positives = 255/400 (63%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPAPKEIRTILDQYVIGQERAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + D+I EL KSN+L++GPTGSGKTLLA+TLAR++NVPF
Sbjct: 101 ------------------NQRDKKDDI-ELGKSNILMIGPTGSGKTLLAETLARLLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 142 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLE+ I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFAGLERVI 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A VR+ + +A + V+ DLV +GLIPEF+GR P++ +
Sbjct: 260 QNRSARGGIGFNAEVRSQEMGKKVGEA------FKEVEPEDLVKFGLIPEFVGRLPVIAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M V L F DAL+ +A KA+ + TGARGLR
Sbjct: 314 LDELDEAALMQILTEPKNALTKQYAKLFEMEGVDLEFRPDALKAVAHKALERKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE IL + M+EIP + V+ V++D+ + P
Sbjct: 374 SILEGILLDTMYEIPSQQ----DVSKVVIDESVIDGSSQP 409
>gi|159043936|ref|YP_001532730.1| ATP-dependent protease ATP-binding subunit ClpX [Dinoroseobacter
shibae DFL 12]
gi|189044133|sp|A8LJA7.1|CLPX_DINSH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|157911696|gb|ABV93129.1| ATP-dependent Clp protease [Dinoroseobacter shibae DFL 12]
Length = 419
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 192/411 (46%), Positives = 269/411 (65%), Gaps = 69/411 (16%)
Query: 36 EIMGGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKS 95
E+ IR++ +S+G++S SEG +PTP+EIC LD++VIGQ AK+
Sbjct: 41 ELCMDIIREETKSSGLKS------------SEG---VPTPQEICDVLDDYVIGQSHAKRV 85
Query: 96 HIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVEN 155
AV+NHYKR+ H +G +
Sbjct: 86 ---------------LSVAVHNHYKRLNH-----------------------AGKTD--- 104
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
+EL KSN+LL+GPTG GKTLLA+TLARI++VPFT+ DAT LT+AGYVGED E+++ K
Sbjct: 105 ---IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILK 161
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
LL A++++VE AQRGIVYIDEVDKI K+++ + RDVSGEGVQQALLK++EGTV +V
Sbjct: 162 LLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVASV-- 219
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
P G RKHP+ + + +DT +ILFICGGAF GLEK I++R + S+IGFGA V+ N
Sbjct: 220 PPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSAIGFGADVKEN------ 273
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
D + ++ DL+ +GLIPEF+GR P++ +L+ L+ED LV +L +PKNAL +QY
Sbjct: 274 -DTRGVGEMFGELEPEDLLKFGLIPEFVGRLPVIATLTDLDEDALVTILTQPKNALVKQY 332
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP 445
+++F + + +L FT+DAL IA +A+ + TGARGLR++LE+IL MF++P
Sbjct: 333 QRLFELEDAQLTFTEDALNAIAGRAIERKTGARGLRSILEDILLNTMFDLP 383
>gi|359790767|ref|ZP_09293648.1| ATP-dependent protease ATP-binding subunit ClpX [Mesorhizobium
alhagi CCNWXJ12-2]
gi|359253255|gb|EHK56410.1| ATP-dependent protease ATP-binding subunit ClpX [Mesorhizobium
alhagi CCNWXJ12-2]
Length = 422
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 195/402 (48%), Positives = 263/402 (65%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI K LD++VIGQ AK+ AV+NHYKR+ H+S
Sbjct: 65 VPTPQEILKVLDDYVIGQPYAKRV---------------LSVAVHNHYKRLAHASKN--- 106
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 107 -----------------------ND--VELAKSNILLIGPTGCGKTLLAQTLARIIDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 202 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTANILFICGGAFAGLDKII 259
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S+R + +SIGF A V + + R+G + V+ DL+ +GLIPEF+GR P+L
Sbjct: 260 SDRGRKTSIGFSATVASPEDRRSG---------EVFRLVEPEDLLKFGLIPEFVGRLPVL 310
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E L+Q+L EPKNAL +QY+++F M NV L F ++AL IAK+A+ + TGARG
Sbjct: 311 ATLEDLDEPALIQILTEPKNALVKQYQRLFEMENVDLTFHENALSAIAKRAIERKTGARG 370
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E IL + MFE+P V V++ +E V P
Sbjct: 371 LRSIMEAILLDTMFELP----ALEGVQEVVISEEVVTGSARP 408
>gi|307129928|ref|YP_003881944.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Dickeya dadantii 3937]
gi|306527457|gb|ADM97387.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Dickeya dadantii 3937]
Length = 424
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 194/402 (48%), Positives = 261/402 (64%), Gaps = 59/402 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI + LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRRHLDDYVIGQEQAKKV---------------LAVAVYNHYKRL--------- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ N +EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 100 ---------------RNGDSN----NSIELGKSNILLIGPTGSGKTLLAETLARFLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQDS--SIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
E+R D+ IGF A V+ GL+ LL V+ GDL+ +GLIPEFIGR P++
Sbjct: 259 -EQRTDTGRGIGFNATVK------GLSQKATEGELLSQVEPGDLIKFGLIPEFIGRLPVV 311
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E+ L+Q+L EPKNAL +QY+ +F + +L F D+AL IAKKAMA+ TGARG
Sbjct: 312 ATLKELDEEALIQILREPKNALTKQYQALFKLEGAELEFRDEALTAIAKKAMARKTGARG 371
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E L E M+++P + +V+ V++D + P
Sbjct: 372 LRSIVEAALLETMYDLPSLE----NVDKVVIDDSVISGQTEP 409
>gi|183601062|ref|ZP_02962555.1| hypothetical protein PROSTU_04685 [Providencia stuartii ATCC 25827]
gi|386742737|ref|YP_006215916.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
stuartii MRSN 2154]
gi|188019402|gb|EDU57442.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Providencia
stuartii ATCC 25827]
gi|384479430|gb|AFH93225.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
stuartii MRSN 2154]
Length = 425
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 259/401 (64%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI + LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIREHLDDYVIGQEQAKKV---------------LSVAVYNHYKRL--------- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 100 ---------------RNGDTTAEG---VELGKSNILLIGPTGSGKTLLAETLARYLDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 202 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 259
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R S IGF A V+ G +D + LL + DL+ +GLIPEFIGR P++
Sbjct: 260 GQRLNTRSGIGFAAEVK------GESDKISEGELLTQTEPEDLIKFGLIPEFIGRLPVVA 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY+ +FS+ +L F ++AL+ IAKKAMA+ TGARGL
Sbjct: 314 TLTELSEEALIQILQEPKNALTKQYQALFSLEGTELEFREEALKAIAKKAMARKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L M+++P + V V+VD+ + P
Sbjct: 374 RSIVEAALLNTMYDLPSME----GVEKVVVDENVINEQSEP 410
>gi|74317694|ref|YP_315434.1| ATP-dependent protease ATP-binding subunit ClpX [Thiobacillus
denitrificans ATCC 25259]
gi|123772958|sp|Q3SI99.1|CLPX_THIDA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|74057189|gb|AAZ97629.1| ClpX, ATPase regulatory subunit [Thiobacillus denitrificans ATCC
25259]
Length = 423
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 199/404 (49%), Positives = 256/404 (63%), Gaps = 62/404 (15%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLPTP EI LD++VIGQ +AKK+ AVYNHYKR+ SS
Sbjct: 62 DLPTPHEISGILDQYVIGQGQAKKA---------------LAVAVYNHYKRLRSSS---- 102
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
GSG VEL KSN+LL+GPTGSGKTLLA+TLAR++NVP
Sbjct: 103 ------------GSGD------------VELAKSNILLIGPTGSGKTLLAQTLARLLNVP 138
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT LT+AGYVGED E+++ KLL D+DV+ A++GIVYIDE+DKI KA++ +
Sbjct: 139 FVIADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAKQGIVYIDEIDKISRKADNPSIT 198
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGT +VP P G RKHP + + +DT +ILFICGGAF GLEK
Sbjct: 199 RDVSGEGVQQALLKLIEGTTASVP-PQGG-RKHPNQEFVQVDTSNILFICGGAFSGLEKV 256
Query: 310 ISERRQDSSIGFGAPVR---ANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFP 366
I R + IGFGA V+ N R + LL V+ DL+ YGLIPEF+GR P
Sbjct: 257 IRGRTEKGGIGFGAQVKNVDENKR---------DAELLHQVEPEDLIKYGLIPEFVGRLP 307
Query: 367 ILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGA 426
++ +L L+E LVQ+L EPKNAL +Q+ K+F M V L F DDAL IAK+A+ + TGA
Sbjct: 308 VVATLDELDEAALVQILTEPKNALTKQFAKLFKMEGVDLEFRDDALNAIAKRALLRRTGA 367
Query: 427 RGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RGLR+++E+ L + M+++P K V+ V+VD + P
Sbjct: 368 RGLRSIIEHALLDTMYDLPSLK----GVSKVVVDNALISGEGQP 407
>gi|89092955|ref|ZP_01165907.1| ATP-dependent protease ATP-binding subunit, partial [Neptuniibacter
caesariensis]
gi|89082980|gb|EAR62200.1| ATP-dependent protease ATP-binding subunit [Oceanospirillum sp.
MED92]
Length = 416
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 193/391 (49%), Positives = 259/391 (66%), Gaps = 55/391 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP E+ LDE+VIGQERAKK AVYNHYKR+ QK
Sbjct: 55 LPTPAELSAALDEYVIGQERAKKV---------------LAVAVYNHYKRL---RFQK-- 94
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KSG VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 95 -------------NDKSG---------VELGKSNILLIGPTGSGKTLLAQTLARLLNVPF 132
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 133 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQLGIVYIDEIDKISRKSDNPSITR 192
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLE+ I
Sbjct: 193 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSNILFICGGAFAGLEQII 250
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + SSIGF A V++ ++D+L +++ DLV YGLIPEF+GR P++ +
Sbjct: 251 RDRSEKSSIGFSAVVKSKDEEKTVSDSLT------ELEAEDLVKYGLIPEFVGRLPMIAT 304
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L+ L+E+ LVQ+L EPKN+L +QY +F M ++ F +AL +A+KA+ + TGARGLR
Sbjct: 305 LAELDEEALVQILTEPKNSLTKQYAALFDMEGAEVDFRQEALLAVAQKALERKTGARGLR 364
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDK 461
++LE L + M+++P +V+ V++D+
Sbjct: 365 SILEATLLDIMYQLP----SMENVSKVVIDE 391
>gi|260596810|ref|YP_003209381.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
turicensis z3032]
gi|429102779|ref|ZP_19164753.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
turicensis 564]
gi|260215987|emb|CBA28640.1| ATP-dependent Clp protease ATP-binding subunit clpX [Cronobacter
turicensis z3032]
gi|426289428|emb|CCJ90866.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
turicensis 564]
Length = 424
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 257/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRSHLDDYVIGQEKAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ R + S IGFGA V+ G + LL V+ DL+ +GLIPEFIGR P++
Sbjct: 259 ANRVETGSGIGFGATVK------GKSQKATEGELLSQVEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+ED L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKKAM++ TGARGL
Sbjct: 313 TLNELSEDALIQILKEPKNALTKQYQALFNLEGVELEFRDEALEAIAKKAMSRKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L E M+++P V V++D+ + P
Sbjct: 373 RSIVEAALLETMYDLP----SMDEVEKVVIDESVIAGQSEP 409
>gi|212638446|ref|YP_002314966.1| ATP-dependent protease ATP-binding subunit ClpX [Anoxybacillus
flavithermus WK1]
gi|226706575|sp|B7GH25.1|CLPX_ANOFW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|212559926|gb|ACJ32981.1| ATP-dependent Clp protease ATP-binding subunit (class III
heat-shock protein) [Anoxybacillus flavithermus WK1]
Length = 420
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 257/401 (64%), Gaps = 59/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI LDE+VIGQ+ AKK+ AVYNHYKRI
Sbjct: 60 DVPKPKEIRDILDEYVIGQDEAKKA---------------LSVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N N + D+ VEL KSN+L++GPTGSGKTLLA+TLARI+NVP
Sbjct: 97 -------------------NSNSKIDD-VELAKSNILMIGPTGSGKTLLAQTLARILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E A++GI+YIDE+DKI K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIERAEKGIIYIDEIDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ +VP P G RKHP + I IDT +ILFICGGAF GLE
Sbjct: 197 RDVSGEGVQQALLKILEGTIASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFDGLEPI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R IGF + +A + LL V DL+ +GLIPEF+GR P++
Sbjct: 255 IKRRLGKKVIGFSSDAQAEVE---------EKDLLSKVLPEDLLKFGLIPEFVGRLPVIT 305
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SL L+ED LV +L++PKNAL +QY+KM +++V+L F ++ALR IAK+A+ + TGARGL
Sbjct: 306 SLQPLDEDALVDILVKPKNALVKQYEKMLELDDVELEFEEEALREIAKRAIERKTGARGL 365
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E I+ + MFE+P V ++ E V AP
Sbjct: 366 RSIIEGIMLDVMFELP----SREDVQKCIITAETVRGEKAP 402
>gi|209525223|ref|ZP_03273766.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Arthrospira
maxima CS-328]
gi|376002437|ref|ZP_09780270.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Arthrospira sp. PCC 8005]
gi|209494408|gb|EDZ94720.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Arthrospira
maxima CS-328]
gi|375329177|emb|CCE16023.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Arthrospira sp. PCC 8005]
Length = 456
Score = 350 bits (899), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 199/397 (50%), Positives = 259/397 (65%), Gaps = 41/397 (10%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LP P EI + LD+ VIGQ KK AVYNHYKR
Sbjct: 77 ELPKPVEIKQYLDKHVIGQNNTKKV---------------LSVAVYNHYKR--------- 112
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
L VD+ S +DE VEL+KSN+LLMGPTG GKTLLA++LA++++VP
Sbjct: 113 -----LSVDAGNISNQDFDETQGYSDEQVELQKSNILLMGPTGCGKTLLAESLAKLLDVP 167
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LT+AGYVG+D E++L +LL ADFD+EAAQ+GI+YIDE+DKI K+E+ +
Sbjct: 168 FAVADATTLTEAGYVGDDVENILLRLLQVADFDIEAAQQGIIYIDEIDKIARKSENTSIT 227
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTVVNVP P G RKHP D I IDT ILFICGGAFVGL+K
Sbjct: 228 RDVSGEGVQQALLKILEGTVVNVP-PQGG-RKHPYQDFIQIDTSKILFICGGAFVGLDKL 285
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTD--ALVTSSLLESVDSGDLVAYGLIPEFIGRFPI 367
+ +R S+GF P ++ G ++ T+ +L++V+ DLV +GLIPEFIGR P+
Sbjct: 286 VEQRMGKKSLGFIQP---GVKPGEEVQKTSVDTTEILQNVEPQDLVKFGLIPEFIGRVPV 342
Query: 368 LVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGAR 427
L +S L+E+ LV++L EP NAL +QYK++ M+NV L F DAL IAK+A + TGAR
Sbjct: 343 LTVISPLDEEALVKILTEPHNALVKQYKQLLKMDNVSLEFEPDALIAIAKEAYRRKTGAR 402
Query: 428 GLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
LR +LE ++ E M+E+P K VN ++ KE V
Sbjct: 403 ALRGILEELMLEVMYELPSRK----DVNRCVITKEMV 435
>gi|387127881|ref|YP_006296486.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylophaga
sp. JAM1]
gi|386274943|gb|AFI84841.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylophaga
sp. JAM1]
Length = 361
Score = 350 bits (899), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 190/400 (47%), Positives = 256/400 (64%), Gaps = 56/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P+P EI L+ +VIGQ +AK+ AVYNHYKR+ H +
Sbjct: 1 MPSPHEIDSALNNYVIGQAKAKRV---------------LSVAVYNHYKRLRHGT----- 40
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ND+ VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF
Sbjct: 41 ----------------------KNDD-VELSKSNILLIGPTGSGKTLLAETLARQLNVPF 77
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE A+ GIVYIDE+DKI K +++ + R
Sbjct: 78 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAETGIVYIDEIDKISKKSDNPSITR 137
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 138 DVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 195
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGF A V++ + +S L V+ DL+ YGLIPEF+GR P++ +
Sbjct: 196 RNRTHKGGIGFSAEVKS------VDTKSPSSEALRGVEPEDLIQYGLIPEFVGRLPVVAT 249
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E LVQ+L EPKNAL +QY+K+F + N +L F DALR IA+KAM + TGARGLR
Sbjct: 250 LEELDEAALVQILTEPKNALTKQYEKLFELENCELEFRADALRAIARKAMERKTGARGLR 309
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+++EN+L + MF++P +V V+VD+ + + P
Sbjct: 310 SIIENVLLDTMFDLP----SLDNVTKVVVDESVINGENTP 345
>gi|381405441|ref|ZP_09930125.1| ATP-dependent protease ATP-binding subunit ClpX [Pantoea sp. Sc1]
gi|380738640|gb|EIB99703.1| ATP-dependent protease ATP-binding subunit ClpX [Pantoea sp. Sc1]
Length = 423
Score = 350 bits (899), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 257/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQERAKK AVYNHYKR+
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + +EL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDTSNGIELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S+R + S IGFGA V+ G + LL + DL+ +GLIPEFIGR P++
Sbjct: 259 SQRVETGSGIGFGATVK------GKSQKASEGELLSQCEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+LS L+E+ L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKKAM++ TGARGL
Sbjct: 313 TLSELSEEALIQILREPKNALTKQYQALFNLEGVELEFRDEALTAIAKKAMSRKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L E M+++P V V++D+ + P
Sbjct: 373 RSIVEGALLETMYDLP----SMDDVEKVVIDESVIDGQSEP 409
>gi|300930259|ref|ZP_07145672.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 187-1]
gi|300461831|gb|EFK25324.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 187-1]
Length = 424
Score = 350 bits (899), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 258/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S R + S IGFGA V+A +D LL V+ DL+ +GLIPEFIGR PI+
Sbjct: 259 SHRVETGSGIGFGATVKAK------SDKASEGELLAQVEPEDLIKFGLIPEFIGRLPIVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY+ +F++ V L F D+AL IAKKAMA+ TGARGL
Sbjct: 313 TLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P + V V++D+ + P
Sbjct: 373 RSIVEAALLDTMYDLPSME----DVEKVVIDESVIDGQSKP 409
>gi|410621863|ref|ZP_11332706.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
pallidula DSM 14239 = ACAM 615]
gi|410158620|dbj|GAC28080.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
pallidula DSM 14239 = ACAM 615]
Length = 425
Score = 350 bits (899), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 192/401 (47%), Positives = 258/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP +I K L+++VIGQE AKK AVYNHYKR+ ++ +
Sbjct: 65 LPTPSDIHKHLNDYVIGQEHAKKV---------------LAVAVYNHYKRLRNNDVH--- 106
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 107 -------------------------DGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+D E AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDPEKAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 202 DVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 259
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + + IGFGA V++ D S L + V+ DLV YGLIPEFIGR P++
Sbjct: 260 EQRVSKGAGIGFGAEVKSA------ADKKAVSQLFKEVEPQDLVKYGLIPEFIGRLPVVA 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
SL LNED L+Q+L EPKNA+ +QY +F++ + +L F DDAL IA KAM + TGARGL
Sbjct: 314 SLEELNEDALIQILKEPKNAITKQYGALFALEDTELEFRDDALHAIATKAMNRKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E +L + M+E+P V+ V++D+ + P
Sbjct: 374 RSIVEAVLLDTMYELP----SMPKVSKVVIDEAVIKGESKP 410
>gi|170727452|ref|YP_001761478.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella woodyi
ATCC 51908]
gi|238688691|sp|B1KLT6.1|CLPX_SHEWM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|169812799|gb|ACA87383.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
woodyi ATCC 51908]
Length = 426
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 257/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP E+ LD++VIGQE+AKK AVYNHYKR+ ++
Sbjct: 65 LPTPHELRAHLDDYVIGQEKAKKV---------------LSVAVYNHYKRLKNA------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G K G VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF
Sbjct: 104 -------------GPKDG---------VELGKSNILLIGPTGSGKTLLAETLARFLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ VP P G RKHP+ + + +DT ILF+CGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQVDTSKILFVCGGAFSGLEKVI 259
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA V+ G D S L V+ DLV YGLIPEFIGR P+L
Sbjct: 260 EQRSHTGTGIGFGAQVK------GEDDKATISDTLMQVEPEDLVKYGLIPEFIGRLPVLA 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L++ L+Q+L EPKNAL +Q+ +F M +V+L F +DAL+ IA KA + TGARGL
Sbjct: 314 TLAELDDAALIQILSEPKNALTKQFAALFEMEDVELEFREDALKAIALKAKTRKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E IL + M+++P T +V V++D+ V P
Sbjct: 374 RSIVEGILLDIMYDLP----STDNVAKVVIDESVVKGESTP 410
>gi|375259345|ref|YP_005018515.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella oxytoca
KCTC 1686]
gi|397656326|ref|YP_006497028.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca E718]
gi|402843203|ref|ZP_10891605.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
sp. OBRC7]
gi|421724876|ref|ZP_16164081.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella oxytoca
M5al]
gi|423101609|ref|ZP_17089311.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5242]
gi|423106997|ref|ZP_17094692.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5243]
gi|423112882|ref|ZP_17100573.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5245]
gi|423127776|ref|ZP_17115455.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5250]
gi|365908823|gb|AEX04276.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella oxytoca
KCTC 1686]
gi|376389123|gb|EHT01815.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5243]
gi|376390376|gb|EHT03062.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5245]
gi|376391397|gb|EHT04076.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5242]
gi|376394815|gb|EHT07465.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5250]
gi|394344932|gb|AFN31053.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca E718]
gi|402277834|gb|EJU26902.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
sp. OBRC7]
gi|410374310|gb|EKP28986.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella oxytoca
M5al]
Length = 424
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 256/401 (63%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRHHLDDYVIGQEPAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S R + S IGFGA V+A +D LL V+ DL+ +GLIPEFIGR P++
Sbjct: 259 SHRVETGSGIGFGATVKAK------SDKASEGELLSQVEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+LS L+E+ L+Q+L EPKNAL +QY+ +FS+ +L F D+AL IAKKAMA+ TGARGL
Sbjct: 313 TLSELSEEALIQILKEPKNALTKQYQALFSLEGAELEFRDEALDAIAKKAMARKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P + V V++D + P
Sbjct: 373 RSIVEAALLDTMYDLPSME----DVEKVVIDASVIDGQSKP 409
>gi|225028672|ref|ZP_03717864.1| hypothetical protein EUBHAL_02951 [Eubacterium hallii DSM 3353]
gi|224953982|gb|EEG35191.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Eubacterium
hallii DSM 3353]
Length = 432
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 208/448 (46%), Positives = 276/448 (61%), Gaps = 65/448 (14%)
Query: 54 ESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACC 113
E E EN N + I+L PKE+ LD++VIGQ+ AKK
Sbjct: 48 EDEFENFNEDTQE---INLMKPKEMKAFLDDYVIGQDEAKKV---------------LSV 89
Query: 114 AVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTG 173
AVYNHYKRI L G VEL+KSN++++GPTG
Sbjct: 90 AVYNHYKRI-------------------LAGGSYD----------VELQKSNIIMLGPTG 120
Query: 174 SGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVY 233
SGKTLLA+TLAR +NVPF I DATALT+AGYVGED E++L KL+ AAD+D+E AQ GI+Y
Sbjct: 121 SGKTLLAQTLARQLNVPFAIADATALTEAGYVGEDVENILLKLIQAADYDIERAQTGIIY 180
Query: 234 IDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDT 292
IDE+DKI K+E+ + RDVSGEGVQQALLK+LEGTV +VP P G RKHP + + IDT
Sbjct: 181 IDEIDKITRKSENTSITRDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFLQIDT 238
Query: 293 KDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDL 352
+ILFICGGAF GLEK I R SIGF A + + LL+ V D
Sbjct: 239 TNILFICGGAFDGLEKIIENRIGKKSIGFQAEIMEQRKKD-------VGVLLKQVLPEDF 291
Query: 353 VAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDAL 412
V +GLIPEFIGR P+ VSL+ L++D LV++L EPK+AL +QY+K+F M+ V+L FTDDAL
Sbjct: 292 VKFGLIPEFIGRVPVNVSLNPLDKDALVKILTEPKSALVKQYQKLFEMDGVELKFTDDAL 351
Query: 413 RLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGC 472
IA+KA+A+NTGARGLR+++E+++ + M+ IP + V + + KE V P
Sbjct: 352 EAIAEKAIARNTGARGLRSIMESVVMDLMYTIPSDDL----VESCTITKETVDGSGEP-- 405
Query: 473 GAKILHGDGELERVLHETKSAHENDSEV 500
++ + D + + K +N++E+
Sbjct: 406 --ELTYHDQPVTKKTVTRKRQKKNNNEI 431
>gi|365158049|ref|ZP_09354292.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bacillus
smithii 7_3_47FAA]
gi|363622228|gb|EHL73399.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bacillus
smithii 7_3_47FAA]
Length = 423
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 200/423 (47%), Positives = 272/423 (64%), Gaps = 67/423 (15%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P P+EI + LDE+VIGQ++AKKS AVYNHYKRI
Sbjct: 60 DVPKPREIREILDEYVIGQDQAKKS---------------LAVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N N + D+ VEL KSN+ L+GPTGSGKTLLA+TLARI+NVP
Sbjct: 97 -------------------NSNSKVDD-VELAKSNICLIGPTGSGKTLLAQTLARILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A++GI+YIDE+DK+ K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIIYIDEIDKVARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFICGGAF G+E+
Sbjct: 197 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFDGIEQI 254
Query: 310 ISERRQDSSIGFGA-PVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I R IGFG+ P + + LL V DL+ +GLIPEFIGR P++
Sbjct: 255 IKRRLGQKVIGFGSDPTKGEIE---------EKDLLSKVVPEDLLKFGLIPEFIGRLPVI 305
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
SL L+E+ L+Q+L +PKNAL +QY+KM +++V+L F +AL IAKKA+ + TGARG
Sbjct: 306 ASLEPLDEEALIQILTKPKNALVKQYQKMMELDHVELEFEQEALVEIAKKAIERKTGARG 365
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLH 488
LR+++E+I+ + MF++P ++ ++ K+ V + P K++ DG R++
Sbjct: 366 LRSIIESIMLDVMFDLP----SREDISKCIITKDTVLNNSMP----KLIGTDG---RIIQ 414
Query: 489 ETK 491
ET+
Sbjct: 415 ETE 417
>gi|429083885|ref|ZP_19146911.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
condimenti 1330]
gi|426547239|emb|CCJ72952.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
condimenti 1330]
Length = 424
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 258/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRHHLDDYVIGQEKAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVQAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ R + S IGFGA V+ G + LL V+ DL+ +GLIPEFIGR P++
Sbjct: 259 ANRVETGSGIGFGATVK------GKSQKATEGELLSQVEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+ED L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKKAM++ TGARGL
Sbjct: 313 TLNELSEDALIQILKEPKNALTKQYQALFNLEGVELEFRDEALEAIAKKAMSRKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L E M+++P + V V++D+ + P
Sbjct: 373 RSIVEAALLETMYDLPSME----DVEKVVIDESVIAGQSEP 409
>gi|292493107|ref|YP_003528546.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Nitrosococcus
halophilus Nc4]
gi|291581702|gb|ADE16159.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Nitrosococcus
halophilus Nc4]
Length = 424
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 191/394 (48%), Positives = 260/394 (65%), Gaps = 56/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI L+++VIGQ RAKK AVYNHYKR+
Sbjct: 66 LPTPHEIRDILNQYVIGQNRAKKV---------------LSVAVYNHYKRLQ-------- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
LG +ND+ VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 103 ----------LGK---------KNDD-VELSKSNILLIGPTGSGKTLLAETLARLLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + ++T +ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVNTANILFICGGAFAGLEKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + IGF A V++ + D +L++V+ DL+ YGLIPEF+GR P++ +
Sbjct: 261 RDRSKKGGIGFSAEVKS------VEDKRSMGEILQAVEPEDLIKYGLIPEFVGRMPVVAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+++L EPKNAL +Q+ ++F M N K+ F +DALR +A KAM + TGARGLR
Sbjct: 315 LDELDEAALIRILTEPKNALTKQFARLFEMENSKVEFREDALRAVAAKAMERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
++LEN+L + M+++P V+ V++D+ V
Sbjct: 375 SILENVLLDTMYDLP----SMDHVSKVVIDESVV 404
>gi|416287649|ref|ZP_11648935.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shigella
boydii ATCC 9905]
gi|320178280|gb|EFW53254.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shigella
boydii ATCC 9905]
Length = 424
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 259/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S R + S IGFGA V+A +D LL V+ DL+ +GLIPEFIGR P++
Sbjct: 259 SHRVETGSGIGFGATVKAK------SDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKKAMA+ TGARGL
Sbjct: 313 TLNELSEEALIQILKEPKNALTKQYQALFNLEGVELEFRDEALDAIAKKAMARKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P + V V++D+ + P
Sbjct: 373 RSIVEAALLDTMYDLPSME----DVEKVVIDESVIDGQSKP 409
>gi|452991803|emb|CCQ96762.1| protein unfolding ATPase required for presentation of proteins to
proteases [Clostridium ultunense Esp]
Length = 426
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 192/403 (47%), Positives = 262/403 (65%), Gaps = 60/403 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LP P +I + LDE+VI QERAK++ AVYNHYKRI +
Sbjct: 58 ELPKPAKIKETLDEYVIKQERAKRA---------------LAVAVYNHYKRINKKPSKT- 101
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
ND VEL+KSN++++GPTGSGKTLLA+TLA+I+NVP
Sbjct: 102 ------------------------ND--VELQKSNIVMIGPTGSGKTLLAQTLAKILNVP 135
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E+++ KL+ AAD+D+E A++GIVYIDE+DKI K E+ +
Sbjct: 136 FAIADATSLTEAGYVGEDVENIILKLIQAADYDIERAEKGIVYIDEIDKIARKTENPSIT 195
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ NVP P G RKHP + I +DT +ILFI GGAF G++K
Sbjct: 196 RDVSGEGVQQALLKILEGTIANVP-PQGG-RKHPHQEFIQVDTTNILFIVGGAFDGIDKI 253
Query: 310 ISERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPI 367
I R S+GFGA ++ ++R G LL+ + DL+ YGLIPEF+GR P+
Sbjct: 254 IQSRVDTKSMGFGAEIKGKEDIRIG---------ELLKQIQPEDLLKYGLIPEFVGRLPV 304
Query: 368 LVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGAR 427
+V+L L+E+ LV++L EPKNAL +QYK++F+M+ V L F D+AL+ +AKKA+ + TGAR
Sbjct: 305 IVTLEELDEEALVRILTEPKNALVKQYKELFNMDGVDLEFDDEALKAVAKKAIDRKTGAR 364
Query: 428 GLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
GLR+++E L + M++IP + L+ KE + S P
Sbjct: 365 GLRSIIEETLLDIMYDIP----SREDIEKCLITKETIESNGEP 403
>gi|254556941|ref|YP_003063358.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus
plantarum JDM1]
gi|300768256|ref|ZP_07078161.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308180930|ref|YP_003925058.1| ATP-dependent protease ATP-binding subunit [Lactobacillus plantarum
subsp. plantarum ST-III]
gi|380032875|ref|YP_004889866.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
plantarum WCFS1]
gi|418275671|ref|ZP_12890994.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Lactobacillus
plantarum subsp. plantarum NC8]
gi|448821642|ref|YP_007414804.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
plantarum ZJ316]
gi|38257506|sp|Q88VE2.1|CLPX_LACPL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254045868|gb|ACT62661.1| ATP-dependent protease ATP-binding subunit [Lactobacillus plantarum
JDM1]
gi|300494320|gb|EFK29483.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308046421|gb|ADN98964.1| ATP-dependent protease ATP-binding subunit [Lactobacillus plantarum
subsp. plantarum ST-III]
gi|342242118|emb|CCC79352.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Lactobacillus
plantarum WCFS1]
gi|376009222|gb|EHS82551.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Lactobacillus
plantarum subsp. plantarum NC8]
gi|448275139|gb|AGE39658.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
plantarum ZJ316]
Length = 421
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 192/401 (47%), Positives = 260/401 (64%), Gaps = 50/401 (12%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+PTPKEI LD++VIGQ AK++ AVYNHYKR+ + E
Sbjct: 60 DIPTPKEIVDELDQYVIGQNEAKRT---------------LSVAVYNHYKRVKAMADNDE 104
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
E ++ EL+KSN+ L+GPTGSGKT LA++LARI++VP
Sbjct: 105 -----------------------ETEDGPELQKSNISLVGPTGSGKTFLAQSLARILDVP 141
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT LT+AGYVGED E++L KLL AD+DVE A++GI+YIDE+DKI K+E+ +
Sbjct: 142 FAIADATTLTEAGYVGEDVENILLKLLQNADYDVERAEKGIIYIDEIDKIAKKSENVSIT 201
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ NVP P G RKHP+ + I IDT +ILFI GGAF G+E
Sbjct: 202 RDVSGEGVQQALLKILEGTIANVP-PQGG-RKHPQQEFIQIDTTNILFIVGGAFDGIEDI 259
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ R D +IGFG + + L D + SL++ V DL+ +GLIPEFIGR PIL
Sbjct: 260 VKRRLGDKTIGFGTD--TDGKNAVLDD---SKSLMQQVVPEDLLQFGLIPEFIGRLPILT 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L ED LV++L EPKNAL +QY+++ +++ +L F DDALR IA++A+A+NTGARGL
Sbjct: 315 ALERLTEDDLVRILTEPKNALVKQYQRLIALDGAELDFNDDALRAIAQEALARNTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E+ + + M++IP V V++ +E V P
Sbjct: 375 RSIIEDTMRDIMYDIP----SREDVKKVIITRETVADHAEP 411
>gi|330829917|ref|YP_004392869.1| ATP-dependent Clp protease ATP-binding subunit clpX [Aeromonas
veronii B565]
gi|406676845|ref|ZP_11084030.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Aeromonas
veronii AMC35]
gi|423201788|ref|ZP_17188367.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Aeromonas
veronii AER39]
gi|423206427|ref|ZP_17192983.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Aeromonas
veronii AMC34]
gi|423209383|ref|ZP_17195937.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Aeromonas
veronii AER397]
gi|328805053|gb|AEB50252.1| ATP-dependent Clp protease ATP-binding subunit clpX [Aeromonas
veronii B565]
gi|404615735|gb|EKB12694.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Aeromonas
veronii AER39]
gi|404617241|gb|EKB14177.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Aeromonas
veronii AER397]
gi|404621979|gb|EKB18844.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Aeromonas
veronii AMC34]
gi|404625159|gb|EKB21976.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Aeromonas
veronii AMC35]
Length = 424
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 265/407 (65%), Gaps = 60/407 (14%)
Query: 67 EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSS 126
+GN +LPTP +I LD++VIGQE AKK AVYNHYKR+ +S
Sbjct: 60 DGN-ELPTPHQIRAHLDDYVIGQEYAKKV---------------LAVAVYNHYKRLRNS- 102
Query: 127 LQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARI 186
G SG VEL KSN+LL+GPTGSGKTLLA+TLAR+
Sbjct: 103 ------------------GENSG---------VELGKSNILLIGPTGSGKTLLAETLARL 135
Query: 187 VNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAES 245
++VPFT+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++
Sbjct: 136 LDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDN 195
Query: 246 RNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVG 305
+ RDVSGEGVQQALLK++EGT+ +VP P G RKHP+ + + +DT ILFICGGAF G
Sbjct: 196 PSITRDVSGEGVQQALLKLIEGTIASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAG 253
Query: 306 LEKTISERR-QDSSIGFGAPVRANMRTGGLTDALVT-SSLLESVDSGDLVAYGLIPEFIG 363
L+K I +R + + IGFGA V++ DA T S V+ DL+ YGLIPEFIG
Sbjct: 254 LDKVIEQRSVKGTGIGFGAEVKSK-------DAKATLSETFAKVEPEDLIKYGLIPEFIG 306
Query: 364 RFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKN 423
R P++ +L+ L+E L+Q+L EPKNAL +QY +F + V+L F DDAL IA+KAM +
Sbjct: 307 RLPVVATLTELDESALIQILKEPKNALTKQYAALFDLEGVELEFRDDALNAIARKAMERK 366
Query: 424 TGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
TGARGLR+++E +L + M+++P + V+ V++D+ + AP
Sbjct: 367 TGARGLRSIVEAVLLDTMYDLPSLE----GVSKVVIDETVIKGDSAP 409
>gi|282850556|ref|ZP_06259935.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Veillonella
parvula ATCC 17745]
gi|282580049|gb|EFB85453.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Veillonella
parvula ATCC 17745]
Length = 417
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 191/401 (47%), Positives = 261/401 (65%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTP+EI LDE+VIGQ+ AK I AVYNHYKR+
Sbjct: 59 ELPTPREIKAHLDEYVIGQDDAK---------------ISLAVAVYNHYKRLQTD----- 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
NV +D VEL+K+NVL +GPTGSGKTLLA+TLA+++ VP
Sbjct: 99 ---------------------NVVDD--VELQKANVLFIGPTGSGKTLLAQTLAKMLEVP 135
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L K++ AAD+D+ A+RGI+YIDE+DKI K+E+ +
Sbjct: 136 FAIADATSLTEAGYVGEDVENILLKIIQAADYDIARAERGIIYIDEIDKIARKSENPSIT 195
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + + IDT +ILFICGGAF ++K
Sbjct: 196 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPNQEMLQIDTTNILFICGGAFDSMDKV 253
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I++R ++GFGA V+ S++L+ V DL+ +GLIPEFIGR P++V
Sbjct: 254 ITKRTAKKTLGFGADVQRKEERN-------ISAILKDVVPEDLLKFGLIPEFIGRLPVMV 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+ D L+Q+L +PKNAL +QY+K+ S++ V+L FT+DAL IA +A+ + TGARGL
Sbjct: 307 TLDQLDRDALIQILTKPKNALTKQYEKILSLDGVELTFTEDALEEIADEALQRKTGARGL 366
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA++E ++ MFE+P V +V++E+V S P
Sbjct: 367 RAIIEKVMKRVMFEVP----SMPEVTKCIVNRESVLSTGEP 403
>gi|304395500|ref|ZP_07377383.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pantoea sp.
aB]
gi|308185909|ref|YP_003930040.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pantoea vagans
C9-1]
gi|440758261|ref|ZP_20937432.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pantoea
agglomerans 299R]
gi|304356794|gb|EFM21158.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pantoea sp.
aB]
gi|308056419|gb|ADO08591.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pantoea vagans
C9-1]
gi|436428045|gb|ELP25711.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pantoea
agglomerans 299R]
Length = 423
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 257/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQERAKK AVYNHYKR+
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + +EL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDTSNGIELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S+R + S IGFGA V+ G + LL + DL+ +GLIPEFIGR P++
Sbjct: 259 SQRVETGSGIGFGATVK------GKSQKASEGELLSQCEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+LS L+E+ L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKKAM++ TGARGL
Sbjct: 313 TLSELSEEALIQILREPKNALTKQYQALFNLEGVELEFRDEALTAIAKKAMSRKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L E M+++P V V++D+ + P
Sbjct: 373 RSIVEGALLETMYDLP----SMDDVEKVVIDESVIEGQSEP 409
>gi|218290815|ref|ZP_03494884.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Alicyclobacillus acidocaldarius LAA1]
gi|258511811|ref|YP_003185245.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|384135661|ref|YP_005518375.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|218239173|gb|EED06374.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Alicyclobacillus acidocaldarius LAA1]
gi|257478537|gb|ACV58856.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|339289746|gb|AEJ43856.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
Length = 423
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 194/395 (49%), Positives = 256/395 (64%), Gaps = 56/395 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P P EI LD++VIGQE AK++ AVYNHYKRI
Sbjct: 60 DVPKPTEIKAVLDQYVIGQEHAKRA---------------LSVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N + ++ VEL KSN+LL+GPTGSGKTLLA+TLAR +NVP
Sbjct: 97 -------------------NAGSQKNDDVELSKSNILLIGPTGSGKTLLAQTLARTLNVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E A+RGI+YIDE+DKI K+E+ +
Sbjct: 138 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAERGIIYIDEIDKIARKSENPSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ +VP P G RKHP + I IDT +ILFICGGAF GLE
Sbjct: 198 RDVSGEGVQQALLKILEGTIASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFDGLETI 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R IGFGA A+ T S++L+ V DL+ +GLIPEFIGR P++
Sbjct: 256 IKRRLGSKVIGFGAAGSASSETK-------DSAILQHVLPEDLLKFGLIPEFIGRLPVIA 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+E+ L ++L EPKNA+ +Q++K+ M+NV L F +DAL IAK+A+ + TGARGL
Sbjct: 309 TLDALDEEALKRILTEPKNAIVKQFQKLLDMDNVVLEFHEDALETIAKEAIRRGTGARGL 368
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
RA++E+I+ + M+E+P V ++ K AV
Sbjct: 369 RAIIESIMLDVMYELP----SRDDVQKCIITKAAV 399
>gi|251772220|gb|EES52790.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Leptospirillum ferrodiazotrophum]
Length = 434
Score = 350 bits (898), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 188/401 (46%), Positives = 263/401 (65%), Gaps = 56/401 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+L P EI + LD+++IGQERAKK IL AVYNHYKR + + ++
Sbjct: 66 NLMKPSEIKRALDQYIIGQERAKK-----IL----------SVAVYNHYKRARANKISED 110
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
VEL+K N++++GPTG+GKTLLA+TLARI++VP
Sbjct: 111 ----------------------------VELQKGNIIMLGPTGTGKTLLAQTLARILDVP 142
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT LT+AGYVGED E+++ KLL AAD+DVE A+ GI+YIDE+DKI K+E+ +
Sbjct: 143 FAIADATTLTEAGYVGEDVENIILKLLQAADYDVEKAEWGIIYIDEIDKISRKSENPSIT 202
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGTV NVP P G RKHP + I +DT +ILFICGGAFVGL+
Sbjct: 203 RDVSGEGVQQALLKLVEGTVANVP-PQGG-RKHPHQEFIQVDTTNILFICGGAFVGLDSI 260
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
IS+R ++GFGA + D +++ L DL+ YG+IPEFIGRFP++
Sbjct: 261 ISQRLARKTMGFGAESKPAQ------DRILSGKLFMEARPDDLLKYGIIPEFIGRFPVMA 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
L L+E+ +Q+L +PKNAL +Q++K+F++ VKL FT+DALR +A KA + TGARGL
Sbjct: 315 ILEDLDEEAFLQILTQPKNALVKQFEKLFAIEKVKLRFTEDALRAVAHKAYTQKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA+LE ++ + M++IP S+++ V++ + A+ + + P
Sbjct: 375 RAILEEVMLDLMYDIP----SLSNLSEVVITEGAITAKEPP 411
>gi|429205134|ref|ZP_19196411.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus
saerimneri 30a]
gi|428146206|gb|EKW98445.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus
saerimneri 30a]
Length = 414
Score = 350 bits (898), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 201/401 (50%), Positives = 261/401 (65%), Gaps = 55/401 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+PTPKEI LD++VIGQ+ AKK+ AVYNHYKRI +S+L
Sbjct: 60 DVPTPKEIVNILDQYVIGQDAAKKT---------------LAVAVYNHYKRI-NSAL--- 100
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N ++D+ EL+KSN+ ++GPTGSGKT LA++LARI+NVP
Sbjct: 101 ---------------------NDDDDDDTELQKSNICIVGPTGSGKTYLAQSLARILNVP 139
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT LT+AGYVGED E++L KL+ AD+DVE AQRGI+YIDE+DKI K+E+ +
Sbjct: 140 FAIADATTLTEAGYVGEDVENILLKLIQNADYDVERAQRGIIYIDEIDKIAKKSENVSIT 199
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ NVP P G RKHP+ + I IDT +ILFI GGAF G+E
Sbjct: 200 RDVSGEGVQQALLKILEGTIANVP-PQGG-RKHPQQEFIQIDTTNILFIVGGAFDGIEGI 257
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ ER + IGFG T L D + SL++ + DL+ +GLIPEFIGR PIL
Sbjct: 258 VKERLGEKVIGFG-----TNSTNKLQDDV---SLMQQIIPEDLLKFGLIPEFIGRLPILT 309
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L E LV++L EPKNAL +QYKK+ +++ V+L FT AL IAK A+A+NTGARGL
Sbjct: 310 ALEKLKEQDLVRILTEPKNALVKQYKKLLALDGVELDFTPAALGAIAKMAIARNTGARGL 369
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E + + MFEIP G + V+V +E V P
Sbjct: 370 RSIIEGTINDIMFEIP----GNDDIAKVIVTEETVNGTAEP 406
>gi|416273476|ref|ZP_11643391.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shigella
dysenteriae CDC 74-1112]
gi|420378676|ref|ZP_14878175.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
dysenteriae 225-75]
gi|320173742|gb|EFW48925.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shigella
dysenteriae CDC 74-1112]
gi|391306909|gb|EIQ64657.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
dysenteriae 225-75]
Length = 424
Score = 350 bits (898), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 258/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S R + S IGFGA V+A +D LL V+ DL+ +GLIPEFIGR P++
Sbjct: 259 SHRVETGSGIGFGATVKAK------SDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY+ +F++ V L F D+AL IAKKAMA+ TGARGL
Sbjct: 313 TLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P + V V++D+ + P
Sbjct: 373 RSIVEAALLDTMYDLPSME----DVEKVVIDESVINGQSKP 409
>gi|289207759|ref|YP_003459825.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thioalkalivibrio sp. K90mix]
gi|288943390|gb|ADC71089.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thioalkalivibrio sp. K90mix]
Length = 425
Score = 350 bits (898), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 202/424 (47%), Positives = 270/424 (63%), Gaps = 66/424 (15%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E G+ R+S LP P+EI + LD++VIGQ AKK IL
Sbjct: 46 NDIIREEMQEAGHTERDS-----LPKPREIREILDDYVIGQTSAKK-----IL------- 88
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKR+ ++G + VEL KSN++L
Sbjct: 89 ---SVAVYNHYKRLE----------------------ARAGKDD------VELSKSNIML 117
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE A+
Sbjct: 118 IGPTGSGKTLLAETLARVLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAE 177
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
GIVYIDE+DK+ K+++ + RDVSGEGVQQALLK++EGT +VP P G RKHP+ +
Sbjct: 178 NGIVYIDEIDKVSRKSDNPSITRDVSGEGVQQALLKLIEGTTASVP-PQGG-RKHPQQEF 235
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRAN--MRTGGLTDALVTSSLLE 345
+ +DT++ILFICGGAF GLEK I +R + IGF A + + ++GG L+
Sbjct: 236 LQVDTRNILFICGGAFSGLEKIIQQRAEKGGIGFSAELSSKDESKSGG--------QWLK 287
Query: 346 SVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKL 405
+++ DLV YGLIPEF+GR P+ +L L+ED L+ +L +PKNAL +QY ++F M V+L
Sbjct: 288 QLEADDLVRYGLIPEFVGRLPVQATLDELDEDALITILTQPKNALVKQYARLFEMEGVEL 347
Query: 406 HFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVG 465
F DDAL IA KAM + TGARGLR ++ENIL + M+E+P + V+ V++D EAV
Sbjct: 348 EFRDDALAAIAHKAMERKTGARGLRTIMENILLDTMYELPSME----GVSKVVID-EAVI 402
Query: 466 SVDA 469
DA
Sbjct: 403 RGDA 406
>gi|169824904|ref|YP_001692515.1| ATP-dependent Clp protease ATP-binding subunit [Finegoldia magna
ATCC 29328]
gi|167831709|dbj|BAG08625.1| ATP-dependent Clp protease ATP-binding subunit [Finegoldia magna
ATCC 29328]
Length = 411
Score = 350 bits (898), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 261/401 (65%), Gaps = 57/401 (14%)
Query: 65 NSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYH 124
N + IDLP P EI LD++VI QE KK+ AVYNHYKRI
Sbjct: 52 NIQERIDLPKPIEIKDVLDDYVIKQEEGKKA---------------LAVAVYNHYKRI-- 94
Query: 125 SSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLA 184
N N+ N++ VEL+KSN+LL+GPTGSGKTLLA+TLA
Sbjct: 95 -------------------------NSNLMNND-VELQKSNILLVGPTGSGKTLLAETLA 128
Query: 185 RIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KA 243
+I++VPF I DAT+LT+AGYVGED E+V+ KL+ AAD+D+E A++GI+YIDE+DKI K+
Sbjct: 129 KILDVPFAIADATSLTEAGYVGEDVENVILKLIQAADYDIEKAEQGIIYIDEIDKITRKS 188
Query: 244 ESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAF 303
E+ + RDVSGEGVQQALLK++EGT+ NVP P G RKHP + I +DT++ILFI GGAF
Sbjct: 189 ENPSITRDVSGEGVQQALLKIVEGTICNVP-PQGG-RKHPNQEYIQVDTRNILFIVGGAF 246
Query: 304 VGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIG 363
GLEK I R + SIGFGA + N S L + DL+ +GLIPEF+G
Sbjct: 247 EGLEKIIERRTETKSIGFGADLGDNEHKK-------ISELFKDFRPEDLIKFGLIPEFVG 299
Query: 364 RFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKN 423
R P+LV+L L+E L+++L+EPKNA+ +QY+++F M++V+L F +DAL+ IAK A +
Sbjct: 300 RIPVLVTLDELDEQALIRILLEPKNAVIKQYQELFKMDDVELEFDEDALKAIAKLAYDRK 359
Query: 424 TGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
TGARGLR ++E L MFE+P ++ V++ KE+V
Sbjct: 360 TGARGLRTIIEKSLMNIMFELP----SRQDISKVILTKESV 396
>gi|50120088|ref|YP_049255.1| ATP-dependent protease ATP-binding subunit ClpX [Pectobacterium
atrosepticum SCRI1043]
gi|61211478|sp|Q6D826.1|CLPX_ERWCT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|49610614|emb|CAG74059.1| ATP-dependent Clp protease ATP-binding subunit [Pectobacterium
atrosepticum SCRI1043]
Length = 424
Score = 350 bits (898), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 194/402 (48%), Positives = 260/402 (64%), Gaps = 59/402 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI + LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRRHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N ++ +EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 --------------------NGDSSNGIELGKSNILLIGPTGSGKTLLAETLARFLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQDS--SIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
E+R D+ IGF A V+ G + LL V+ GDL+ +GLIPEFIGR P++
Sbjct: 259 -EQRTDTGRGIGFNATVK------GSAEKATEGELLSHVEPGDLIKFGLIPEFIGRLPVV 311
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+ED L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKKAM + TGARG
Sbjct: 312 ATLRELSEDALIQILREPKNALTKQYQALFNLEGVELEFRDEALTAIAKKAMVRKTGARG 371
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E L E M+++P + SV+ V++D+ + P
Sbjct: 372 LRSIVEAALLETMYDLPSLE----SVDKVVIDESVIAGHSEP 409
>gi|366160316|ref|ZP_09460178.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia sp.
TW09308]
gi|432371212|ref|ZP_19614276.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE11]
gi|430900425|gb|ELC22444.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE11]
Length = 424
Score = 350 bits (898), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 198/412 (48%), Positives = 263/412 (63%), Gaps = 62/412 (15%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
+R R+S LPTP EI LD++VIGQE+AKK AVYNHYK
Sbjct: 58 HRERSS-----LPTPHEIRNHLDDYVIGQEQAKKV---------------LAVAVYNHYK 97
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
R+ N + VEL KSN+LL+GPTGSGKTLLA
Sbjct: 98 RLR----------------------------NGDTSNGVELGKSNILLIGPTGSGKTLLA 129
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+TLAR+++VPFT+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI
Sbjct: 130 ETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKI 189
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K+++ + RDVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFIC
Sbjct: 190 SRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFIC 247
Query: 300 GGAFVGLEKTISERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLI 358
GGAF GL+K IS R + S IGFGA V+A +D LL V+ DL+ +GLI
Sbjct: 248 GGAFAGLDKVISHRVETGSGIGFGATVKAK------SDKASEGELLAQVEPEDLIKFGLI 301
Query: 359 PEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKK 418
PEFIGR P++ +L+ L+E+ L+Q+L EPKNAL +QY+ +F++ V L F D+AL IAKK
Sbjct: 302 PEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKK 361
Query: 419 AMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
AMA+ TGARGLR+++E L + M+++P + V V++D+ + P
Sbjct: 362 AMARKTGARGLRSIVEAALLDTMYDLPSME----DVEKVVIDESVIEGQSKP 409
>gi|443311870|ref|ZP_21041493.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Synechocystis sp. PCC 7509]
gi|442778106|gb|ELR88376.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Synechocystis sp. PCC 7509]
Length = 446
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 190/398 (47%), Positives = 259/398 (65%), Gaps = 46/398 (11%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P P+EI LD+ VIGQE AKK AVYNHYKR+
Sbjct: 80 IPKPREIKNHLDDHVIGQEEAKKV---------------LSVAVYNHYKRL--------- 115
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
L + G G +E +EL+KSN+LL+GPTG GKTLLA+TLA+I++VPF
Sbjct: 116 ---SLLQNKTNGKGA---------EEAIELQKSNILLVGPTGCGKTLLAQTLAKILDVPF 163
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E++L +LL AD DVE AQRGI+YIDE+DKI K+E+ + R
Sbjct: 164 AVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITR 223
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKMLEGT+ NVP P G RKHP D I IDT +ILFICGGAFVGL+K +
Sbjct: 224 DVSGEGVQQALLKMLEGTIANVP-PQGG-RKHPYQDCIQIDTSNILFICGGAFVGLDKVV 281
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R S+GF P G++ + +L++++ GDLV +G+IPEFIGR P+
Sbjct: 282 EQRIGKKSMGFIQP------GEGISKEKRAADVLKNLEPGDLVKFGMIPEFIGRIPVAAV 335
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
+ L+ED LV +L +P++AL +QY+K+ +M+NV+L F DAL+ IAK+A + TGAR LR
Sbjct: 336 VEPLDEDTLVAILTQPRSALVKQYQKLLNMDNVQLEFKPDALKAIAKEAYRRKTGARALR 395
Query: 431 ALLENILTEAMFEIPETK-IGTSSVNAVLVDKEAVGSV 467
A++E ++ E M+E+P K + ++ +V+K + +
Sbjct: 396 AIVEELMLEVMYELPSRKDVTCCTITREMVEKRSTAEL 433
>gi|427428455|ref|ZP_18918496.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Caenispirillum
salinarum AK4]
gi|425882188|gb|EKV30870.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Caenispirillum
salinarum AK4]
Length = 423
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 191/377 (50%), Positives = 255/377 (67%), Gaps = 56/377 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P+P++I LD++VIGQ AK+ AV+NHYKR+ H
Sbjct: 64 VPSPRDILGVLDDYVIGQPHAKRV---------------LSVAVHNHYKRLQHG------ 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G KS + VE+ KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 -------------GGKSPD--------VEIAKSNILLVGPTGCGKTLLAQTLARILDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 202 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 259
Query: 311 SERRQDSSIGFGAPVR--ANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S+R + +SIGFGA V+ R G +L V+ DL+ YGLIPEF+GR P++
Sbjct: 260 SQRGKGTSIGFGADVKDPEERRMG---------EILRGVEPEDLLKYGLIPEFVGRLPVI 310
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+ED LV++L PKNAL +QY+K+F M +VKL TDDALR IA+K + + TGARG
Sbjct: 311 ATLEDLDEDALVEILTGPKNALVKQYQKLFEMEDVKLSLTDDALRAIARKGIERKTGARG 370
Query: 429 LRALLENILTEAMFEIP 445
LR+++E IL E MF++P
Sbjct: 371 LRSIIEGILLETMFDLP 387
>gi|386824462|ref|ZP_10111597.1| ATP-dependent protease ATP-binding subunit ClpX [Serratia
plymuthica PRI-2C]
gi|386378673|gb|EIJ19475.1| ATP-dependent protease ATP-binding subunit ClpX [Serratia
plymuthica PRI-2C]
Length = 423
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 193/401 (48%), Positives = 258/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N ++ +EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 --------------------NGDSSNGIELGKSNILLIGPTGSGKTLLAETLARFLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R S IGFGA V+ G ++ LL + DL+ +GLIPEFIGR P++
Sbjct: 259 GQRVNTGSGIGFGATVK------GESEKATEGELLLQAEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+LS L+ED L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKKAMA+ TGARGL
Sbjct: 313 TLSELSEDALIQILKEPKNALTKQYQALFNLEGVELEFRDEALNAIAKKAMARKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P SV+ V++D+ + P
Sbjct: 373 RSIVEGALLDTMYDLP----SMDSVDKVVIDESVIAGQSKP 409
>gi|206579207|ref|YP_002240082.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae 342]
gi|288936833|ref|YP_003440892.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
variicola At-22]
gi|290510111|ref|ZP_06549481.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
sp. 1_1_55]
gi|238066657|sp|B5Y0U1.1|CLPX_KLEP3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|206568265|gb|ACI10041.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
pneumoniae 342]
gi|288891542|gb|ADC59860.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
variicola At-22]
gi|289776827|gb|EFD84825.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
sp. 1_1_55]
Length = 424
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 257/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S R + S IGFGA V+A +D LL V+ DL+ +GLIPEFIGR P++
Sbjct: 259 SHRVETGSGIGFGATVKAK------SDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY+ +FS+ +L F D+AL IAKKAMA+ TGARGL
Sbjct: 313 TLNELSEEALIQILKEPKNALTKQYQALFSLEGAELEFRDEALDAIAKKAMARKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P V V++D+ + P
Sbjct: 373 RSIVEAALLDTMYDLP----SMDDVEKVVIDESVIEGQSKP 409
>gi|437849000|ref|ZP_20847210.1| ATP-dependent protease ATP-binding subunit ClpX, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 6.0562-1]
gi|435338625|gb|ELP07836.1| ATP-dependent protease ATP-binding subunit ClpX, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 6.0562-1]
Length = 365
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 259/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 6 LPTPHEIRTHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 42
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + N VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 43 ------------------NGDTSNG--VELGKSNILLIGPTGSGKTLLAETLARLLDVPF 82
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 83 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 142
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 143 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 200
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ R + S IGFGA V+A +D LL V+ DL+ +GLIPEFIGR P++
Sbjct: 201 ANRVETGSGIGFGATVKAK------SDKASEGELLSQVEPEDLIKFGLIPEFIGRLPVVA 254
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY+ +F++ V L F D+AL IA+KAMA+ TGARGL
Sbjct: 255 TLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIARKAMARKTGARGL 314
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P + V V++D+ + P
Sbjct: 315 RSIVEAALLDTMYDLPSME----DVEKVVIDESVIAGQSKP 351
>gi|295695313|ref|YP_003588551.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Kyrpidia
tusciae DSM 2912]
gi|295410915|gb|ADG05407.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Kyrpidia
tusciae DSM 2912]
Length = 421
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 262/401 (65%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P P EI LD++VIGQ+ AKKS AVYNHYKRI
Sbjct: 60 DVPKPTEIRAILDQYVIGQDHAKKS---------------LAVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N + D+ VEL KSN+LL+GPTGSGKTLLA+TLARI+NVP
Sbjct: 97 -------------------NAQGKPDD-VELSKSNILLIGPTGSGKTLLAQTLARILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A++GI+YIDE+DKI K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIIYIDEIDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFICGGAF GLE+
Sbjct: 197 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTSNILFICGGAFDGLEQI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R IGFG+ R L+ V S +L DL+ YGLIPEF+GR P++
Sbjct: 255 IKRRLGRKVIGFGS---EEARGTDLSRDEVLSKVLPE----DLLKYGLIPEFVGRLPVIT 307
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+AL+E L ++L+EPKNAL +QY+++ +++V+L FTD+AL IA++A+ +NTGARGL
Sbjct: 308 TLAALDETALKRILLEPKNALVKQYQRLLELDDVQLEFTDEALTEIAREAIKRNTGARGL 367
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA++E I+ + M+EIP + +V KE V ++P
Sbjct: 368 RAIIEGIMLDVMYEIP----SRDDITKCVVTKETVLLKESP 404
>gi|417831546|ref|ZP_12478068.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 01-09591]
gi|340735698|gb|EGR64754.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 01-09591]
Length = 410
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 259/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 50 LPTPHEIRNHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 86
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + N VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 87 ------------------NGDTSNG--VELGKSNILLIGPTGSGKTLLAETLARLLDVPF 126
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 127 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 186
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 187 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 244
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S R + S IGFGA V+A +D LL V+ DL+ +GLIPEFIGR P++
Sbjct: 245 SHRVETGSGIGFGATVKAK------SDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVA 298
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY+ +F++ V L F D+AL IAKKAMA+ TGARGL
Sbjct: 299 TLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGL 358
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P + V V++D+ + P
Sbjct: 359 RSIVEAALLDTMYDLPSME----DVEKVVIDESVIDGQSKP 395
>gi|313893233|ref|ZP_07826810.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Veillonella
sp. oral taxon 158 str. F0412]
gi|313442586|gb|EFR61001.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Veillonella
sp. oral taxon 158 str. F0412]
Length = 417
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 190/401 (47%), Positives = 262/401 (65%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LPTP++I LDE+VIGQ+ AK I AVYNHYKR+
Sbjct: 59 ELPTPRDIKAHLDEYVIGQDDAK---------------ISLAVAVYNHYKRLQTD----- 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
NV +D VEL+K+NVL +GPTGSGKTLLA+TLA+++ VP
Sbjct: 99 ---------------------NVVDD--VELQKANVLFIGPTGSGKTLLAQTLAKMLEVP 135
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L K++ AAD+D+ A+RGI+YIDE+DKI K+E+ +
Sbjct: 136 FAIADATSLTEAGYVGEDVENILLKIIQAADYDIARAERGIIYIDEIDKIARKSENPSIT 195
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + + IDT +ILFICGGAF G+++
Sbjct: 196 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPNQEMLQIDTTNILFICGGAFDGMDRV 253
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I++R ++GFGA V+ S++L+ V DL+ +GLIPEFIGR P++V
Sbjct: 254 ITKRTAKKTLGFGADVQRKEERN-------VSAILKDVVPEDLLKFGLIPEFIGRLPVMV 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+ D L+Q+L +PKNAL +QY+K+ S++ V+L FT+DAL IA +A+ + TGARGL
Sbjct: 307 TLDQLDRDALIQILTKPKNALTKQYEKILSLDGVELTFTEDALEEIADEALQRKTGARGL 366
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA++E ++ MFE+P V +V++E+V S P
Sbjct: 367 RAIIEKVMKRVMFEVP----SMPEVTKCIVNRESVLSTGEP 403
>gi|397905706|ref|ZP_10506548.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Caloramator
australicus RC3]
gi|397161225|emb|CCJ33883.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Caloramator
australicus RC3]
Length = 431
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 187/377 (49%), Positives = 253/377 (67%), Gaps = 54/377 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLP PKEI + LD++V+GQ+ AKK+ AVYNHYKRI
Sbjct: 58 DLPKPKEIKEYLDQYVVGQDEAKKA---------------LAVAVYNHYKRI-------- 94
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N + VEL+KSN+LL+GPTGSGKTLLA+TLA+++NVP
Sbjct: 95 -------------------NAPKSRRDDVELQKSNILLLGPTGSGKTLLAQTLAKMLNVP 135
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT LT+AGYVGED E++L +L+ AD+D+E A++GI+YIDE+DKI K+E+ +
Sbjct: 136 FAIADATTLTEAGYVGEDVENILLRLIQNADYDIERAEKGIIYIDEIDKIARKSENPSIT 195
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV NVP P G RKHP + + IDT +ILFICGGAF G++K
Sbjct: 196 RDVSGEGVQQALLKILEGTVANVP-PQGG-RKHPHQEFLQIDTTNILFICGGAFEGIDKI 253
Query: 310 ISERRQDSSIGFGAPVRA-NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I +R +SIGFGA +++ N R G +L+ + DL+ +G+IPEF+GR PI+
Sbjct: 254 IEKRLHKNSIGFGAEIKSKNERNVG--------EILKHILPEDLLKFGMIPEFVGRVPIV 305
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
V+L+ L++D L+ +L EPKNAL +QY K+F M+ V+L F +AL IA +A+ + TGARG
Sbjct: 306 VTLNQLDKDALINILTEPKNALTKQYAKLFEMDGVELEFEREALEAIADEALKRKTGARG 365
Query: 429 LRALLENILTEAMFEIP 445
LRA++E ++ + MFEIP
Sbjct: 366 LRAIMEELMMDVMFEIP 382
>gi|347819078|ref|ZP_08872512.1| ATP-dependent protease ATP-binding subunit ClpX [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 421
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 191/405 (47%), Positives = 257/405 (63%), Gaps = 55/405 (13%)
Query: 67 EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSS 126
E DLPTP E+ LD +VIGQ+ AK++ AVYNHYKR+ H
Sbjct: 60 EARSDLPTPVELKHNLDNYVIGQDMAKRT---------------LAVAVYNHYKRLRHKD 104
Query: 127 LQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARI 186
++ + VEL KSN+LL+GPTGSGKTLLA+TLAR+
Sbjct: 105 RARK--------------------------DDVELSKSNILLIGPTGSGKTLLAQTLARM 138
Query: 187 VNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAES 245
+NVPF + DAT LT+AGYVGED E+++ KLL + +++VE AQRGIVYIDE+DKI K+++
Sbjct: 139 LNVPFVMADATTLTEAGYVGEDVENIVQKLLQSCNYEVERAQRGIVYIDEIDKISRKSDN 198
Query: 246 RNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVG 305
+ RDVSGEGVQQALLK++EGT+ +VP P G RKHP D + IDT +ILFICGGAF G
Sbjct: 199 PSITRDVSGEGVQQALLKLIEGTMASVP-PQGG-RKHPNQDFLQIDTTNILFICGGAFAG 256
Query: 306 LEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRF 365
LEK I R + S IGFGA V++ ++ + + ++ DL+ YGLIPE +GR
Sbjct: 257 LEKIIENRTEASGIGFGASVKSRLQRS-------LTEVFAEIEPEDLIKYGLIPELVGRM 309
Query: 366 PILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTG 425
P++ +L+ L+E LVQ+L EP+NAL +QY K+ +M V L ALR IA+KA+A+ TG
Sbjct: 310 PVVTALTELSEAALVQILTEPRNALVKQYGKLLAMEGVDLEIRPAALRAIARKALARKTG 369
Query: 426 ARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
ARGLR++LE L MF++P TS+V V+VD+ + P
Sbjct: 370 ARGLRSILEQSLNTTMFDLP----NTSNVEKVVVDESTIEENKPP 410
>gi|312110027|ref|YP_003988343.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Geobacillus
sp. Y4.1MC1]
gi|336234451|ref|YP_004587067.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Geobacillus
thermoglucosidasius C56-YS93]
gi|423719067|ref|ZP_17693249.1| ATP-dependent Clp protease, ATP-binding subunit clpX [Geobacillus
thermoglucosidans TNO-09.020]
gi|311215128|gb|ADP73732.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Geobacillus
sp. Y4.1MC1]
gi|335361306|gb|AEH46986.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Geobacillus
thermoglucosidasius C56-YS93]
gi|383367970|gb|EID45245.1| ATP-dependent Clp protease, ATP-binding subunit clpX [Geobacillus
thermoglucosidans TNO-09.020]
Length = 420
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 201/412 (48%), Positives = 262/412 (63%), Gaps = 62/412 (15%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI + LDE+VIGQ+ AKKS AVYNHYKRI
Sbjct: 60 DIPKPKEIREILDEYVIGQDEAKKS---------------LAVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
SG K + VEL KSN+L++GPTGSGKTLLA+TLARI+NVP
Sbjct: 97 ------------NSGSKIDD--------VELSKSNILMIGPTGSGKTLLAQTLARILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A++GI+YIDE+DKI K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVERAEKGIIYIDEIDKIARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ +VP P G RKHP + I IDT +ILFICGGAF G+E
Sbjct: 197 RDVSGEGVQQALLKILEGTIASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFDGIEPI 254
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R IGFGA V+ + + +LL V DL+ +GLIPEFIGR P++
Sbjct: 255 IKRRLGKKVIGFGADVQQS--------EVDEKNLLSKVLPEDLLKFGLIPEFIGRLPVIT 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+E LV +L +PKNA+ +QY+KM ++ V+L F +DALR IAKKA+ + TGARGL
Sbjct: 307 TLEPLDEQALVDILTKPKNAIVKQYQKMLELDGVELEFEEDALREIAKKAIERKTGARGL 366
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDG 481
R+++E I+ + MFE+P V ++ E V + P K++ DG
Sbjct: 367 RSIIEGIMLDVMFELP----SREDVQKCIITVETVRGNEPP----KLIRHDG 410
>gi|383784112|ref|YP_005468681.1| clpX, ATPase regulatory subunit [Leptospirillum ferrooxidans C2-3]
gi|383083024|dbj|BAM06551.1| clpX, ATPase regulatory subunit [Leptospirillum ferrooxidans C2-3]
Length = 427
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 193/410 (47%), Positives = 266/410 (64%), Gaps = 60/410 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
L P EI + LD++V+GQERAKK AVYNHYKRI
Sbjct: 65 LLKPVEINRILDQYVVGQERAKKV---------------LSVAVYNHYKRI--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N N +N + VEL+K N+L++GPTG+GKTLLA+TLARI++VPF
Sbjct: 101 ------------------NAN-QNSDDVELQKGNILMIGPTGTGKTLLAQTLARILDVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E+++ KLL +AD+DVE A++GI+YIDE+DKI K+E+ + R
Sbjct: 142 AIADATTLTEAGYVGEDVENIILKLLQSADYDVEKAEKGIIYIDEIDKISRKSENPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV NVP P G RKHP + I +DT +ILFICGGAF+GL+ +
Sbjct: 202 DVSGEGVQQALLKLVEGTVANVP-PQGG-RKHPHQEFIQVDTTNILFICGGAFIGLDNIV 259
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S+R + ++GFGA +R + D LL DL+ YGLIPEF+GRFP++
Sbjct: 260 SQRISNKNLGFGADIRT------VEDRKKVGELLVKSRPDDLLKYGLIPEFVGRFPVMAV 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED +++L EPKNAL +Q++K+FS+ +V+L FT DAL+ IA KA + TGARGLR
Sbjct: 314 LEDLDEDAFLRILTEPKNALIKQFEKLFSIEHVQLTFTLDALKAIAHKAFVQKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGD 480
++LE ++ + M++IP ++V V++ +E + + G KI+ D
Sbjct: 374 SILEEVMLDLMYDIP----SVTNVREVIISEETINN----GALPKIIRDD 415
>gi|402822002|ref|ZP_10871511.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas sp.
LH128]
gi|402264483|gb|EJU14337.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas sp.
LH128]
Length = 420
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 193/391 (49%), Positives = 260/391 (66%), Gaps = 56/391 (14%)
Query: 56 ETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAV 115
ET+ G R EG I +P++IC+ L+++VIGQERAK+ AV
Sbjct: 51 ETKAGIAGRK-EGEI--VSPRDICEMLNDYVIGQERAKRV---------------LSVAV 92
Query: 116 YNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSG 175
+NHYKR+ HS Q + VEL KSN+LL+GPTGSG
Sbjct: 93 HNHYKRLKHSGKQGD----------------------------VELSKSNILLVGPTGSG 124
Query: 176 KTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYID 235
KTLLA+TLAR +VPFT+ DAT LT+AGYVGED E+++ KLL A+D++VE AQ+GIVYID
Sbjct: 125 KTLLAQTLARTFDVPFTMADATTLTEAGYVGEDVENIILKLLQASDYNVEKAQQGIVYID 184
Query: 236 EVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKD 294
E+DKI KAE+ + RDVSGEGVQQALLK++EGT +VP P G RKHP+ + + +DT +
Sbjct: 185 EIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVP-PQGG-RKHPQQEFLQVDTTN 242
Query: 295 ILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVA 354
ILFICGGAF GL+K I++R Q SIGFGA V D LL+ + DL+
Sbjct: 243 ILFICGGAFAGLDKIIADRLQKRSIGFGAHV-------ADPDKRRVGELLQKAEPEDLLK 295
Query: 355 YGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRL 414
+GLIPEF+GR P++ +L+ L+ + LV++L EPKNAL +QY ++F + +V+L FTDDAL
Sbjct: 296 FGLIPEFVGRLPVIATLNDLDIEALVKILKEPKNALIKQYARLFELEDVELTFTDDALEA 355
Query: 415 IAKKAMAKNTGARGLRALLENILTEAMFEIP 445
IAKKA+ + TGARGLR+++E +L + MF++P
Sbjct: 356 IAKKAIERKTGARGLRSIVEGLLLDTMFDLP 386
>gi|344199552|ref|YP_004783878.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Acidithiobacillus ferrivorans SS3]
gi|343774996|gb|AEM47552.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Acidithiobacillus ferrivorans SS3]
Length = 423
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 196/382 (51%), Positives = 256/382 (67%), Gaps = 52/382 (13%)
Query: 65 NSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYH 124
+SEG LP P EI K LD++VIGQ+ AKK AVYNHYKR+ +
Sbjct: 56 HSEGQEKLPKPMEIRKTLDDYVIGQDAAKKV---------------LSVAVYNHYKRLEY 100
Query: 125 SSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLA 184
D VEL+KSN+LL+GPTGSGKTLLA+TLA
Sbjct: 101 GG----------------------------KDNEVELDKSNILLIGPTGSGKTLLAQTLA 132
Query: 185 RIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KA 243
R++NVPF + DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+
Sbjct: 133 RLLNVPFAMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQTGIVYIDEIDKITRKS 192
Query: 244 ESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAF 303
E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT+ ILFICGGAF
Sbjct: 193 ENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRHILFICGGAF 250
Query: 304 VGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIG 363
GLEK++S R + +GF AP++ +R G T AL L+++++ DLV YGLIPEF+G
Sbjct: 251 AGLEKSVSARLEKGGMGFNAPLK--LRDKGATAAL----LMQNLEPEDLVRYGLIPEFVG 304
Query: 364 RFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKN 423
R PIL L L+E+ LV +L EPKNAL +QY+K+F++ V L F +A+R IAKKA+ +
Sbjct: 305 RLPILALLEELDEEALVSILTEPKNALVKQYQKLFALEGVTLEFRTEAVRAIAKKALTRK 364
Query: 424 TGARGLRALLENILTEAMFEIP 445
TGARGLR++LE IL + M+E+P
Sbjct: 365 TGARGLRSILEQILLDTMYELP 386
>gi|448240809|ref|YP_007404862.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Serratia
marcescens WW4]
gi|445211173|gb|AGE16843.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Serratia
marcescens WW4]
gi|453062435|gb|EMF03426.1| ATP-dependent protease ATP-binding subunit ClpX [Serratia
marcescens VGH107]
Length = 423
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 193/401 (48%), Positives = 257/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + +EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 --------------------NGDTSNGIELGKSNILLIGPTGSGKTLLAETLARFLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGT+ VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R S IGFGA V+ G ++ LL + DL+ +GLIPEFIGR P++
Sbjct: 259 GQRVNTGSGIGFGATVK------GESEKATEGELLLQAEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+LS L+ED L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKKAMA+ TGARGL
Sbjct: 313 TLSELSEDALIQILKEPKNALTKQYQALFNLEGVELEFRDEALNAIAKKAMARKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P SV+ V++D+ + P
Sbjct: 373 RSIVEGALLDTMYDLP----SMDSVDKVVIDESVIAGQSKP 409
>gi|144899461|emb|CAM76325.1| ClpX, ATPase regulatory subunit [Magnetospirillum gryphiswaldense
MSR-1]
Length = 421
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 191/375 (50%), Positives = 255/375 (68%), Gaps = 53/375 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPK+I LD++VIGQ+ AKK AV+NHYKR+ H
Sbjct: 63 VPTPKDIRAVLDDYVIGQDHAKKV---------------LSVAVHNHYKRLQH------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G K+G VE+ KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 101 -------------GGKAGE--------VEIAKSNILLIGPTGCGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AA+++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAAEYNVERAQRGIVYIDEVDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKVI 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R +++SIGFGA VR D T +L V+ DL+ +GLIPEF+GR P+L +
Sbjct: 258 GTRGKNNSIGFGAEVRG-------PDERRTGQILREVEPEDLLKFGLIPEFVGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ LV++L +PKNAL +QY+++F M + +L F +DAL IA+KA+A+ TGARGLR
Sbjct: 311 LDDLDVGALVEILSKPKNALVKQYQRLFEMEDTRLSFKEDALVSIAEKAIARKTGARGLR 370
Query: 431 ALLENILTEAMFEIP 445
+++E+IL + MFE+P
Sbjct: 371 SIMESILLDTMFELP 385
>gi|15800168|ref|NP_286180.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. EDL933]
gi|15829746|ref|NP_308519.1| ATP-dependent protease ATP-binding protein ClpX [Escherichia coli
O157:H7 str. Sakai]
gi|16128423|ref|NP_414972.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli str. K-12 substr. MG1655]
gi|24111822|ref|NP_706332.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella flexneri
2a str. 301]
gi|26246449|ref|NP_752488.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
CFT073]
gi|30061940|ref|NP_836111.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella flexneri
2a str. 2457T]
gi|74311013|ref|YP_309432.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella sonnei
Ss046]
gi|82775655|ref|YP_402002.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella
dysenteriae Sd197]
gi|91209512|ref|YP_539498.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
UTI89]
gi|110640699|ref|YP_668427.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
536]
gi|110804466|ref|YP_687986.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella flexneri
5 str. 8401]
gi|117622698|ref|YP_851611.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
APEC O1]
gi|157157655|ref|YP_001461625.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
E24377A]
gi|157159965|ref|YP_001457283.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
HS]
gi|168754543|ref|ZP_02779550.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4401]
gi|168768393|ref|ZP_02793400.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4486]
gi|168778931|ref|ZP_02803938.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4076]
gi|168786289|ref|ZP_02811296.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC869]
gi|170021189|ref|YP_001726143.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
ATCC 8739]
gi|170080024|ref|YP_001729344.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
str. K-12 substr. DH10B]
gi|170682782|ref|YP_001742582.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
SMS-3-5]
gi|187730793|ref|YP_001879149.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella boydii
CDC 3083-94]
gi|188492973|ref|ZP_03000243.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 53638]
gi|193064164|ref|ZP_03045248.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli E22]
gi|208807403|ref|ZP_03249740.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4206]
gi|208814875|ref|ZP_03256054.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4045]
gi|208822907|ref|ZP_03263225.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4042]
gi|209398902|ref|YP_002269085.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. EC4115]
gi|209917655|ref|YP_002291739.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
SE11]
gi|215485519|ref|YP_002327950.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O127:H6 str. E2348/69]
gi|217325849|ref|ZP_03441933.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. TW14588]
gi|218553005|ref|YP_002385918.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
IAI1]
gi|218557348|ref|YP_002390261.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
S88]
gi|218688302|ref|YP_002396514.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
ED1a]
gi|218693901|ref|YP_002401568.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
55989]
gi|218698650|ref|YP_002406279.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
IAI39]
gi|218703722|ref|YP_002411241.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
UMN026]
gi|222155228|ref|YP_002555367.1| ATP-dependent Clp protease ATP-binding subunit clpX [Escherichia
coli LF82]
gi|227884551|ref|ZP_04002356.1| ATP-dependent protease ATP-binding subunit [Escherichia coli 83972]
gi|237707567|ref|ZP_04538048.1| ATP-dependent protease ATP-binding subunit [Escherichia sp.
3_2_53FAA]
gi|238899726|ref|YP_002925522.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
BW2952]
gi|251783946|ref|YP_002998250.1| clpX, subunit of ClpX ATP-dependent protease specificity component
and chaperone, ClpXP and ClpAXP [Escherichia coli
BL21(DE3)]
gi|253774573|ref|YP_003037404.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160507|ref|YP_003043615.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli B
str. REL606]
gi|254287311|ref|YP_003053059.1| ATP-dependent protease ATP-binding subunit [Escherichia coli
BL21(DE3)]
gi|254791622|ref|YP_003076459.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. TW14359]
gi|260842639|ref|YP_003220417.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O103:H2 str. 12009]
gi|260853661|ref|YP_003227552.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. 11368]
gi|260866599|ref|YP_003233001.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O111:H- str. 11128]
gi|261223921|ref|ZP_05938202.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O157:H7 str. FRIK2000]
gi|261256365|ref|ZP_05948898.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O157:H7 str. FRIK966]
gi|291281345|ref|YP_003498163.1| ATP-dependent Clp protease ATP-binding subunit clpX [Escherichia
coli O55:H7 str. CB9615]
gi|293403559|ref|ZP_06647650.1| ClpX [Escherichia coli FVEC1412]
gi|293408588|ref|ZP_06652427.1| ATP-dependent Clp protease [Escherichia coli B354]
gi|293413693|ref|ZP_06656342.1| ATP-dependent Clp protease [Escherichia coli B185]
gi|293418509|ref|ZP_06660944.1| ATP-dependent Clp protease [Escherichia coli B088]
gi|298379171|ref|ZP_06989052.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli FVEC1302]
gi|300818230|ref|ZP_07098441.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 107-1]
gi|300820316|ref|ZP_07100468.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 119-7]
gi|300900509|ref|ZP_07118676.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 198-1]
gi|300903294|ref|ZP_07121222.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 84-1]
gi|300918179|ref|ZP_07134786.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 115-1]
gi|300924165|ref|ZP_07140157.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 182-1]
gi|300937055|ref|ZP_07151921.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 21-1]
gi|300947909|ref|ZP_07162057.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 116-1]
gi|300958006|ref|ZP_07170170.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 175-1]
gi|300988007|ref|ZP_07178487.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 45-1]
gi|300997373|ref|ZP_07181713.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 200-1]
gi|301022568|ref|ZP_07186440.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 69-1]
gi|301025666|ref|ZP_07189184.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 196-1]
gi|301301589|ref|ZP_07207724.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 124-1]
gi|301647364|ref|ZP_07247176.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 146-1]
gi|306813094|ref|ZP_07447287.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
NC101]
gi|307312184|ref|ZP_07591820.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli W]
gi|309787030|ref|ZP_07681642.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
dysenteriae 1617]
gi|309794829|ref|ZP_07689250.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 145-7]
gi|312964537|ref|ZP_07778793.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2362-75]
gi|312970534|ref|ZP_07784715.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 1827-70]
gi|331640958|ref|ZP_08342093.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli H736]
gi|331645614|ref|ZP_08346718.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli M605]
gi|331651376|ref|ZP_08352401.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli M718]
gi|331656495|ref|ZP_08357457.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA206]
gi|331661819|ref|ZP_08362742.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA143]
gi|331666793|ref|ZP_08367667.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA271]
gi|331671985|ref|ZP_08372781.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA280]
gi|331676110|ref|ZP_08376822.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli H591]
gi|331681833|ref|ZP_08382466.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli H299]
gi|332281589|ref|ZP_08394002.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Shigella sp. D9]
gi|378714156|ref|YP_005279049.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KO11FL]
gi|383177028|ref|YP_005455033.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella sonnei
53G]
gi|384541994|ref|YP_005726055.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shigella
flexneri 2002017]
gi|386279463|ref|ZP_10057144.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
sp. 4_1_40B]
gi|386596686|ref|YP_006093086.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli DH1]
gi|386598155|ref|YP_006099661.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli IHE3034]
gi|386605608|ref|YP_006111908.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
UM146]
gi|386607801|ref|YP_006123287.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli W]
gi|386612633|ref|YP_006132299.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli UMNK88]
gi|386622810|ref|YP_006142538.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O7:K1 str. CE10]
gi|386628027|ref|YP_006147747.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
str. 'clone D i2']
gi|386632947|ref|YP_006152666.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
str. 'clone D i14']
gi|386637853|ref|YP_006104651.1| ATP-dependent specificity component of ClpP serine protease
[Escherichia coli ABU 83972]
gi|386702755|ref|YP_006166592.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
KO11FL]
gi|386708241|ref|YP_006171962.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
W]
gi|387505456|ref|YP_006157712.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O55:H7 str. RM12579]
gi|387605948|ref|YP_006094804.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
042]
gi|387610963|ref|YP_006114079.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
ETEC H10407]
gi|387615755|ref|YP_006118777.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O83:H1 str. NRG 857C]
gi|387620197|ref|YP_006127824.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli DH1]
gi|388476544|ref|YP_488730.1| ATPase and-specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli str. K-12 substr. W3110]
gi|404373760|ref|ZP_10978995.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
sp. 1_1_43]
gi|407467888|ref|YP_006785670.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|407483382|ref|YP_006780531.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 2011C-3493]
gi|410483934|ref|YP_006771480.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|414574651|ref|ZP_11431860.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 3233-85]
gi|415777141|ref|ZP_11488393.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3431]
gi|415790317|ref|ZP_11494959.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EPECa14]
gi|415801141|ref|ZP_11499542.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli E128010]
gi|415814598|ref|ZP_11506196.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli LT-68]
gi|415821037|ref|ZP_11510051.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli OK1180]
gi|415828316|ref|ZP_11514913.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli OK1357]
gi|415836284|ref|ZP_11518696.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli RN587/1]
gi|415852352|ref|ZP_11528728.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 53G]
gi|415859378|ref|ZP_11533653.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2a str. 2457T]
gi|415862716|ref|ZP_11536156.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 85-1]
gi|415873839|ref|ZP_11541012.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 79-10]
gi|416296134|ref|ZP_11651340.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shigella
flexneri CDC 796-83]
gi|416312993|ref|ZP_11657928.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. 1044]
gi|416316809|ref|ZP_11659941.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC1212]
gi|416325623|ref|ZP_11666031.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. 1125]
gi|416334478|ref|ZP_11671386.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli WV_060327]
gi|416341382|ref|ZP_11676005.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli EC4100B]
gi|416780507|ref|ZP_11876893.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. G5101]
gi|416791659|ref|ZP_11881792.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H- str. 493-89]
gi|416803302|ref|ZP_11886653.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H- str. H 2687]
gi|416811873|ref|ZP_11890146.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O55:H7 str. 3256-97]
gi|416822834|ref|ZP_11895161.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O55:H7 str. USDA 5905]
gi|416835008|ref|ZP_11901256.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. LSU-61]
gi|416895868|ref|ZP_11925752.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_7v]
gi|417114411|ref|ZP_11965682.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 1.2741]
gi|417132697|ref|ZP_11977482.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5.0588]
gi|417139479|ref|ZP_11982901.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0259]
gi|417144119|ref|ZP_11985925.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 1.2264]
gi|417152749|ref|ZP_11991540.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0497]
gi|417168503|ref|ZP_12000954.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0741]
gi|417173403|ref|ZP_12003199.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.2608]
gi|417179144|ref|ZP_12007244.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93.0624]
gi|417191047|ref|ZP_12013643.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 4.0522]
gi|417218200|ref|ZP_12023802.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli JB1-95]
gi|417224452|ref|ZP_12027743.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.154]
gi|417229525|ref|ZP_12031111.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5.0959]
gi|417246915|ref|ZP_12040016.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 9.0111]
gi|417252909|ref|ZP_12044668.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 4.0967]
gi|417260706|ref|ZP_12048204.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2.3916]
gi|417267718|ref|ZP_12055079.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.3884]
gi|417270523|ref|ZP_12057876.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2.4168]
gi|417275380|ref|ZP_12062717.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.2303]
gi|417284656|ref|ZP_12071951.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3003]
gi|417288855|ref|ZP_12076140.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW07793]
gi|417292982|ref|ZP_12080262.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli B41]
gi|417299497|ref|ZP_12086727.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 900105 (10e)]
gi|417306940|ref|ZP_12093820.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli PCN033]
gi|417579662|ref|ZP_12230484.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_B2F1]
gi|417585233|ref|ZP_12236013.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_C165-02]
gi|417590121|ref|ZP_12240841.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2534-86]
gi|417595363|ref|ZP_12246033.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3030-1]
gi|417600720|ref|ZP_12251305.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_94C]
gi|417606430|ref|ZP_12256959.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_DG131-3]
gi|417611471|ref|ZP_12261945.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_EH250]
gi|417616827|ref|ZP_12267261.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli G58-1]
gi|417621707|ref|ZP_12272036.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_H.1.8]
gi|417627381|ref|ZP_12277628.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_MHI813]
gi|417632923|ref|ZP_12283144.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_S1191]
gi|417637738|ref|ZP_12287913.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TX1999]
gi|417661014|ref|ZP_12310595.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli AA86]
gi|417665524|ref|ZP_12315091.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_O31]
gi|417680501|ref|ZP_12329886.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 3594-74]
gi|417688201|ref|ZP_12337447.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 5216-82]
gi|417700468|ref|ZP_12349608.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-218]
gi|417705976|ref|ZP_12355041.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri VA-6]
gi|417710995|ref|ZP_12360002.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-272]
gi|417715956|ref|ZP_12364889.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-227]
gi|417721393|ref|ZP_12370239.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-304]
gi|417726777|ref|ZP_12375521.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-671]
gi|417731998|ref|ZP_12380669.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2747-71]
gi|417737259|ref|ZP_12385865.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 4343-70]
gi|417741877|ref|ZP_12390429.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2930-71]
gi|417754234|ref|ZP_12402329.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2B]
gi|417803794|ref|ZP_12450829.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. LB226692]
gi|417826440|ref|ZP_12473018.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri J1713]
gi|417867744|ref|ZP_12512779.1| clpX [Escherichia coli O104:H4 str. C227-11]
gi|417945742|ref|ZP_12588971.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
XH140A]
gi|417976588|ref|ZP_12617380.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
XH001]
gi|418042555|ref|ZP_12680748.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
W26]
gi|418253618|ref|ZP_12878643.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 6603-63]
gi|418262478|ref|ZP_12883857.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei str. Moseley]
gi|418301289|ref|ZP_12913083.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli UMNF18]
gi|418941048|ref|ZP_13494388.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H43 str. T22]
gi|418959267|ref|ZP_13511166.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
J53]
gi|418995501|ref|ZP_13543115.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1A]
gi|419000595|ref|ZP_13548157.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1B]
gi|419006129|ref|ZP_13553585.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1C]
gi|419011996|ref|ZP_13559361.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1D]
gi|419016900|ref|ZP_13564226.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1E]
gi|419022591|ref|ZP_13569833.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2A]
gi|419027402|ref|ZP_13574602.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2C]
gi|419033514|ref|ZP_13580612.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2D]
gi|419038182|ref|ZP_13585242.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2E]
gi|419043547|ref|ZP_13590521.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3A]
gi|419049040|ref|ZP_13595959.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3B]
gi|419055095|ref|ZP_13601953.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3C]
gi|419060689|ref|ZP_13607474.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3D]
gi|419066567|ref|ZP_13613248.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3E]
gi|419073421|ref|ZP_13618994.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3F]
gi|419078752|ref|ZP_13624237.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4A]
gi|419084403|ref|ZP_13629819.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4B]
gi|419090489|ref|ZP_13635809.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4C]
gi|419096619|ref|ZP_13641863.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4D]
gi|419102073|ref|ZP_13647240.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4E]
gi|419107526|ref|ZP_13652636.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4F]
gi|419113293|ref|ZP_13658328.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5A]
gi|419118879|ref|ZP_13663864.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5B]
gi|419124571|ref|ZP_13669475.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5C]
gi|419130099|ref|ZP_13674952.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5D]
gi|419134857|ref|ZP_13679666.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5E]
gi|419140969|ref|ZP_13685726.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6A]
gi|419146494|ref|ZP_13691190.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6B]
gi|419152271|ref|ZP_13696859.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6C]
gi|419157779|ref|ZP_13702305.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6D]
gi|419162711|ref|ZP_13707191.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6E]
gi|419168434|ref|ZP_13712832.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7A]
gi|419173777|ref|ZP_13717633.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7B]
gi|419179427|ref|ZP_13723052.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7C]
gi|419184985|ref|ZP_13728507.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7D]
gi|419190233|ref|ZP_13733701.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7E]
gi|419195535|ref|ZP_13738943.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8A]
gi|419201541|ref|ZP_13744769.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8B]
gi|419207439|ref|ZP_13750567.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8C]
gi|419213879|ref|ZP_13756911.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8D]
gi|419219703|ref|ZP_13762660.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8E]
gi|419225167|ref|ZP_13768057.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9A]
gi|419230952|ref|ZP_13773744.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9B]
gi|419236286|ref|ZP_13779037.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9C]
gi|419241880|ref|ZP_13784530.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9D]
gi|419247289|ref|ZP_13789904.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9E]
gi|419253065|ref|ZP_13795615.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10A]
gi|419259074|ref|ZP_13801534.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10B]
gi|419264949|ref|ZP_13807336.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10C]
gi|419270762|ref|ZP_13813095.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10D]
gi|419276560|ref|ZP_13818830.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10E]
gi|419282162|ref|ZP_13824384.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10F]
gi|419287903|ref|ZP_13830021.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11A]
gi|419293242|ref|ZP_13835303.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11B]
gi|419298682|ref|ZP_13840700.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11C]
gi|419304966|ref|ZP_13846880.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11D]
gi|419309991|ref|ZP_13851868.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11E]
gi|419315310|ref|ZP_13857138.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12A]
gi|419321086|ref|ZP_13862829.1| ATP-dependent protease Clp, ATPase subunit [Escherichia coli
DEC12B]
gi|419327333|ref|ZP_13868966.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12C]
gi|419332743|ref|ZP_13874307.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12D]
gi|419339679|ref|ZP_13881156.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12E]
gi|419344086|ref|ZP_13885470.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13A]
gi|419348519|ref|ZP_13889872.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13B]
gi|419353422|ref|ZP_13894708.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13C]
gi|419358765|ref|ZP_13899996.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13D]
gi|419363727|ref|ZP_13904909.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13E]
gi|419368722|ref|ZP_13909851.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14A]
gi|419373907|ref|ZP_13914963.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14B]
gi|419379325|ref|ZP_13920306.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14C]
gi|419384581|ref|ZP_13925485.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14D]
gi|419389855|ref|ZP_13930694.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15A]
gi|419395027|ref|ZP_13935812.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15B]
gi|419400378|ref|ZP_13941112.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15C]
gi|419405550|ref|ZP_13946254.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15D]
gi|419411044|ref|ZP_13951717.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15E]
gi|419699354|ref|ZP_14226970.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
SCI-07]
gi|419805362|ref|ZP_14330500.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
AI27]
gi|419811817|ref|ZP_14336689.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O32:H37 str. P4]
gi|419862465|ref|ZP_14385070.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O103:H25 str. CVM9340]
gi|419867897|ref|ZP_14390211.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O103:H2 str. CVM9450]
gi|419876970|ref|ZP_14398629.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9534]
gi|419882603|ref|ZP_14403813.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9545]
gi|419888440|ref|ZP_14408947.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9570]
gi|419893035|ref|ZP_14413041.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9574]
gi|419900592|ref|ZP_14420018.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM9942]
gi|419906389|ref|ZP_14425301.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O26:H11 str. CVM10026]
gi|419915476|ref|ZP_14433841.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
KD1]
gi|419916843|ref|ZP_14435127.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
KD2]
gi|419923188|ref|ZP_14441150.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
541-15]
gi|419928056|ref|ZP_14445776.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
541-1]
gi|419937106|ref|ZP_14454022.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
576-1]
gi|419941390|ref|ZP_14458079.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
75]
gi|419945557|ref|ZP_14461996.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
HM605]
gi|419948923|ref|ZP_14465186.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
CUMT8]
gi|420088257|ref|ZP_14600161.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9602]
gi|420092933|ref|ZP_14604623.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9634]
gi|420103063|ref|ZP_14613977.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9455]
gi|420109691|ref|ZP_14619791.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9553]
gi|420113373|ref|ZP_14623116.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM10021]
gi|420119641|ref|ZP_14628906.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM10030]
gi|420125720|ref|ZP_14634511.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O26:H11 str. CVM10224]
gi|420130829|ref|ZP_14639309.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM9952]
gi|420267877|ref|ZP_14770284.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA22]
gi|420273504|ref|ZP_14775837.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA40]
gi|420278817|ref|ZP_14781084.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW06591]
gi|420284946|ref|ZP_14787164.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW10246]
gi|420290574|ref|ZP_14792739.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW11039]
gi|420296235|ref|ZP_14798332.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW09109]
gi|420302065|ref|ZP_14804097.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW10119]
gi|420307959|ref|ZP_14809933.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1738]
gi|420313259|ref|ZP_14815167.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1734]
gi|420318882|ref|ZP_14820739.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2850-71]
gi|420324045|ref|ZP_14825831.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri CCH060]
gi|420329610|ref|ZP_14831315.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-1770]
gi|420340004|ref|ZP_14841531.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-404]
gi|420351207|ref|ZP_14852406.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 4444-74]
gi|420357064|ref|ZP_14858080.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 3226-85]
gi|420361958|ref|ZP_14862884.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 4822-66]
gi|420370211|ref|ZP_14870824.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 1235-66]
gi|420384076|ref|ZP_14883464.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EPECa12]
gi|420389778|ref|ZP_14889051.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EPEC C342-62]
gi|421681141|ref|ZP_16120971.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 1485-80]
gi|421777838|ref|ZP_16214428.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
AD30]
gi|421810661|ref|ZP_16246472.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0416]
gi|421816754|ref|ZP_16252317.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 10.0821]
gi|421822139|ref|ZP_16257577.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK920]
gi|421828872|ref|ZP_16264202.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA7]
gi|422330695|ref|ZP_16411712.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli 4_1_47FAA]
gi|422355329|ref|ZP_16436045.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 117-3]
gi|422356282|ref|ZP_16436971.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 110-3]
gi|422363027|ref|ZP_16443575.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 153-1]
gi|422368705|ref|ZP_16449110.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 16-3]
gi|422378072|ref|ZP_16458295.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 60-1]
gi|422378679|ref|ZP_16458886.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 57-2]
gi|422748495|ref|ZP_16802408.1| ATP-dependent Clp protease [Escherichia coli H252]
gi|422753091|ref|ZP_16806918.1| ATP-dependent Clp protease [Escherichia coli H263]
gi|422763233|ref|ZP_16816988.1| ATP-dependent Clp protease [Escherichia coli E1167]
gi|422764969|ref|ZP_16818696.1| ATP-dependent Clp protease [Escherichia coli E1520]
gi|422769667|ref|ZP_16823358.1| ATP-dependent Clp protease [Escherichia coli E482]
gi|422777135|ref|ZP_16830788.1| ATP-dependent Clp protease [Escherichia coli H120]
gi|422782769|ref|ZP_16835554.1| ATP-dependent Clp protease [Escherichia coli TW10509]
gi|422785048|ref|ZP_16837787.1| ATP-dependent Clp protease [Escherichia coli H489]
gi|422791246|ref|ZP_16843949.1| ATP-dependent Clp protease [Escherichia coli TA007]
gi|422802319|ref|ZP_16850813.1| ATP-dependent Clp protease [Escherichia coli M863]
gi|422816452|ref|ZP_16864667.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli M919]
gi|422830601|ref|ZP_16878757.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli B093]
gi|422835146|ref|ZP_16883203.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli E101]
gi|422838960|ref|ZP_16886932.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli H397]
gi|422960325|ref|ZP_16971773.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli H494]
gi|422974759|ref|ZP_16976460.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli TA124]
gi|422991154|ref|ZP_16981925.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. C227-11]
gi|422993093|ref|ZP_16983857.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. C236-11]
gi|422998304|ref|ZP_16989060.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 09-7901]
gi|423006765|ref|ZP_16997508.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 04-8351]
gi|423008408|ref|ZP_16999146.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-3677]
gi|423022595|ref|ZP_17013298.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4404]
gi|423027749|ref|ZP_17018442.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4522]
gi|423033586|ref|ZP_17024270.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4623]
gi|423036452|ref|ZP_17027126.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C1]
gi|423041572|ref|ZP_17032239.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C2]
gi|423048258|ref|ZP_17038915.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C3]
gi|423051842|ref|ZP_17040650.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C4]
gi|423058807|ref|ZP_17047603.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C5]
gi|423652933|ref|ZP_17628236.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA31]
gi|423701219|ref|ZP_17675678.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli H730]
gi|423710209|ref|ZP_17684559.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli B799]
gi|424075300|ref|ZP_17812664.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA505]
gi|424081628|ref|ZP_17818504.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA517]
gi|424088249|ref|ZP_17824524.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1996]
gi|424094468|ref|ZP_17830243.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1985]
gi|424100870|ref|ZP_17836049.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1990]
gi|424107683|ref|ZP_17842277.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93-001]
gi|424113672|ref|ZP_17847840.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA3]
gi|424119734|ref|ZP_17853464.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA5]
gi|424125994|ref|ZP_17859212.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA9]
gi|424132077|ref|ZP_17864896.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA10]
gi|424138623|ref|ZP_17870935.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA14]
gi|424145063|ref|ZP_17876850.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA15]
gi|424151209|ref|ZP_17882480.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA24]
gi|424184947|ref|ZP_17887913.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA25]
gi|424266452|ref|ZP_17893815.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA28]
gi|424421801|ref|ZP_17899544.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA32]
gi|424453617|ref|ZP_17905172.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA33]
gi|424459915|ref|ZP_17910873.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA39]
gi|424466384|ref|ZP_17916592.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA41]
gi|424472945|ref|ZP_17922638.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA42]
gi|424478893|ref|ZP_17928156.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW07945]
gi|424484963|ref|ZP_17933847.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW09098]
gi|424491085|ref|ZP_17939499.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW09195]
gi|424498174|ref|ZP_17945464.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4203]
gi|424504403|ref|ZP_17951199.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4196]
gi|424510661|ref|ZP_17956915.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW14313]
gi|424518229|ref|ZP_17962675.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW14301]
gi|424524058|ref|ZP_17968099.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4421]
gi|424530266|ref|ZP_17973912.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4422]
gi|424536240|ref|ZP_17979519.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4013]
gi|424542148|ref|ZP_17984985.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4402]
gi|424548472|ref|ZP_17990696.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4439]
gi|424554736|ref|ZP_17996474.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4436]
gi|424561083|ref|ZP_18002384.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4437]
gi|424567111|ref|ZP_18008043.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4448]
gi|424573299|ref|ZP_18013738.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1845]
gi|424579254|ref|ZP_18019203.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1863]
gi|424747926|ref|ZP_18176078.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O26:H11 str. CFSAN001629]
gi|424766681|ref|ZP_18194026.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O111:H11 str. CFSAN001630]
gi|424768159|ref|ZP_18195451.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O111:H8 str. CFSAN001632]
gi|424836930|ref|ZP_18261567.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella flexneri
5a str. M90T]
gi|425095925|ref|ZP_18498966.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.4870]
gi|425102064|ref|ZP_18504729.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5.2239]
gi|425107865|ref|ZP_18510133.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 6.0172]
gi|425113767|ref|ZP_18515605.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0566]
gi|425118533|ref|ZP_18520268.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0569]
gi|425123687|ref|ZP_18525281.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0586]
gi|425129727|ref|ZP_18530843.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.2524]
gi|425136067|ref|ZP_18536806.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 10.0833]
gi|425141967|ref|ZP_18542274.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 10.0869]
gi|425148285|ref|ZP_18548196.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 88.0221]
gi|425153903|ref|ZP_18553466.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA34]
gi|425160352|ref|ZP_18559541.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA506]
gi|425165862|ref|ZP_18564686.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA507]
gi|425172155|ref|ZP_18570569.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA504]
gi|425178035|ref|ZP_18576104.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1999]
gi|425184184|ref|ZP_18581823.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1997]
gi|425190935|ref|ZP_18588076.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli NE1487]
gi|425197264|ref|ZP_18593929.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli NE037]
gi|425203925|ref|ZP_18600069.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK2001]
gi|425209680|ref|ZP_18605431.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA4]
gi|425215720|ref|ZP_18611053.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA23]
gi|425222290|ref|ZP_18617164.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA49]
gi|425228535|ref|ZP_18622946.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA45]
gi|425234835|ref|ZP_18628809.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TT12B]
gi|425240840|ref|ZP_18634490.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MA6]
gi|425246964|ref|ZP_18640188.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5905]
gi|425252695|ref|ZP_18645587.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli CB7326]
gi|425259006|ref|ZP_18651384.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC96038]
gi|425265104|ref|ZP_18657042.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5412]
gi|425271134|ref|ZP_18662648.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW15901]
gi|425276313|ref|ZP_18667657.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli ARS4.2123]
gi|425281806|ref|ZP_18672927.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW00353]
gi|425286996|ref|ZP_18677931.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3006]
gi|425292564|ref|ZP_18683163.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA38]
gi|425298637|ref|ZP_18688687.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 07798]
gi|425303945|ref|ZP_18693734.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli N1]
gi|425309307|ref|ZP_18698787.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1735]
gi|425315220|ref|ZP_18704310.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1736]
gi|425321273|ref|ZP_18709960.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1737]
gi|425327465|ref|ZP_18715701.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1846]
gi|425333650|ref|ZP_18721383.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1847]
gi|425340071|ref|ZP_18727326.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1848]
gi|425345949|ref|ZP_18732765.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1849]
gi|425352162|ref|ZP_18738556.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1850]
gi|425358152|ref|ZP_18744138.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1856]
gi|425364262|ref|ZP_18749825.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1862]
gi|425370707|ref|ZP_18755683.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1864]
gi|425377259|ref|ZP_18761661.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1865]
gi|425383501|ref|ZP_18767392.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1866]
gi|425390201|ref|ZP_18773671.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1868]
gi|425396319|ref|ZP_18779377.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1869]
gi|425402304|ref|ZP_18784920.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1870]
gi|425408845|ref|ZP_18791012.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli NE098]
gi|425415115|ref|ZP_18796765.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK523]
gi|425421051|ref|ZP_18802282.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 0.1288]
gi|425426271|ref|ZP_18807332.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 0.1304]
gi|427803505|ref|ZP_18970572.1| ATP-dependent specificity component of clpP serine protease
[Escherichia coli chi7122]
gi|427808123|ref|ZP_18975188.1| ATP-dependent specificity component of clpP serine protease,
chaperone [Escherichia coli]
gi|428944920|ref|ZP_19017579.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 88.1467]
gi|428951074|ref|ZP_19023220.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 88.1042]
gi|428956930|ref|ZP_19028640.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 89.0511]
gi|428963262|ref|ZP_19034458.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 90.0091]
gi|428969325|ref|ZP_19039967.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 90.0039]
gi|428975895|ref|ZP_19046076.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 90.2281]
gi|428981616|ref|ZP_19051362.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93.0055]
gi|428987880|ref|ZP_19057180.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93.0056]
gi|428993692|ref|ZP_19062607.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 94.0618]
gi|428999791|ref|ZP_19068309.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.0183]
gi|429006033|ref|ZP_19073957.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.1288]
gi|429012378|ref|ZP_19079639.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.0943]
gi|429018516|ref|ZP_19085309.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0428]
gi|429024268|ref|ZP_19090688.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0427]
gi|429030582|ref|ZP_19096468.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0939]
gi|429036768|ref|ZP_19102217.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0932]
gi|429042686|ref|ZP_19107700.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0107]
gi|429048496|ref|ZP_19113156.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0003]
gi|429053859|ref|ZP_19118355.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.1742]
gi|429059552|ref|ZP_19123704.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0007]
gi|429064997|ref|ZP_19128866.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0672]
gi|429071564|ref|ZP_19134921.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0678]
gi|429076829|ref|ZP_19140049.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0713]
gi|429722634|ref|ZP_19257532.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-9450]
gi|429774731|ref|ZP_19306734.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02030]
gi|429779994|ref|ZP_19311947.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02033-1]
gi|429784046|ref|ZP_19315959.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02092]
gi|429789384|ref|ZP_19321259.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02093]
gi|429795614|ref|ZP_19327440.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02281]
gi|429801540|ref|ZP_19333318.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02318]
gi|429805172|ref|ZP_19336919.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02913]
gi|429809983|ref|ZP_19341685.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-03439]
gi|429815743|ref|ZP_19347402.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-04080]
gi|429821331|ref|ZP_19352944.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-03943]
gi|429824045|ref|ZP_19355562.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0109]
gi|429830413|ref|ZP_19361280.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0010]
gi|429907005|ref|ZP_19372974.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-9990]
gi|429911203|ref|ZP_19377159.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-9941]
gi|429917039|ref|ZP_19382979.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4984]
gi|429922077|ref|ZP_19387998.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-5604]
gi|429927895|ref|ZP_19393801.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4986]
gi|429931827|ref|ZP_19397722.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4987]
gi|429933429|ref|ZP_19399319.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4988]
gi|429939083|ref|ZP_19404957.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-5603]
gi|429946726|ref|ZP_19412581.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-6006]
gi|429949358|ref|ZP_19415206.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec12-0465]
gi|429957642|ref|ZP_19423471.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec12-0466]
gi|432352101|ref|ZP_19595410.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE2]
gi|432356782|ref|ZP_19600029.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE4]
gi|432361189|ref|ZP_19604386.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE5]
gi|432368417|ref|ZP_19611522.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE10]
gi|432375521|ref|ZP_19618535.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE12]
gi|432380066|ref|ZP_19623030.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE15]
gi|432385895|ref|ZP_19628794.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE16]
gi|432390366|ref|ZP_19633230.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE21]
gi|432396312|ref|ZP_19639104.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE25]
gi|432400550|ref|ZP_19643310.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE26]
gi|432405308|ref|ZP_19648031.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE28]
gi|432410507|ref|ZP_19653190.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE39]
gi|432429587|ref|ZP_19672047.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE181]
gi|432430554|ref|ZP_19672999.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE187]
gi|432435083|ref|ZP_19677484.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE188]
gi|432439751|ref|ZP_19682114.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE189]
gi|432444875|ref|ZP_19687184.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE191]
gi|432453234|ref|ZP_19695474.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE193]
gi|432455366|ref|ZP_19697568.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE201]
gi|432459409|ref|ZP_19701573.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE204]
gi|432464450|ref|ZP_19706558.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE205]
gi|432469871|ref|ZP_19711924.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE206]
gi|432474458|ref|ZP_19716471.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE208]
gi|432479799|ref|ZP_19721764.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE210]
gi|432484166|ref|ZP_19726090.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE212]
gi|432492734|ref|ZP_19734573.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE213]
gi|432494307|ref|ZP_19736125.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE214]
gi|432503146|ref|ZP_19744883.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE220]
gi|432512646|ref|ZP_19749889.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE224]
gi|432521075|ref|ZP_19758240.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE228]
gi|432522591|ref|ZP_19759730.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE230]
gi|432529806|ref|ZP_19766850.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE233]
gi|432532627|ref|ZP_19769627.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE234]
gi|432541292|ref|ZP_19778167.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE235]
gi|432541814|ref|ZP_19778675.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE236]
gi|432547158|ref|ZP_19783955.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE237]
gi|432552446|ref|ZP_19789178.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE47]
gi|432562348|ref|ZP_19798975.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE51]
gi|432567277|ref|ZP_19803804.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE53]
gi|432572433|ref|ZP_19808924.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE55]
gi|432579115|ref|ZP_19815549.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE56]
gi|432582549|ref|ZP_19818959.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE57]
gi|432586737|ref|ZP_19823109.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE58]
gi|432591557|ref|ZP_19827886.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE60]
gi|432596323|ref|ZP_19832612.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE62]
gi|432600955|ref|ZP_19837210.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE66]
gi|432606323|ref|ZP_19842519.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE67]
gi|432610172|ref|ZP_19846345.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE72]
gi|432615212|ref|ZP_19851347.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE75]
gi|432620541|ref|ZP_19856587.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE76]
gi|432626022|ref|ZP_19862007.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE77]
gi|432630008|ref|ZP_19865958.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE80]
gi|432635752|ref|ZP_19871638.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE81]
gi|432639557|ref|ZP_19875402.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE83]
gi|432644873|ref|ZP_19880676.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE86]
gi|432649966|ref|ZP_19885728.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE87]
gi|432654448|ref|ZP_19890167.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE93]
gi|432659680|ref|ZP_19895341.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE111]
gi|432664626|ref|ZP_19900222.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE116]
gi|432669370|ref|ZP_19904919.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE119]
gi|432678033|ref|ZP_19913459.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE142]
gi|432678860|ref|ZP_19914263.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE143]
gi|432684271|ref|ZP_19919590.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE156]
gi|432690328|ref|ZP_19925574.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE161]
gi|432697755|ref|ZP_19932927.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE169]
gi|432712159|ref|ZP_19947211.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE8]
gi|432717450|ref|ZP_19952452.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE9]
gi|432722001|ref|ZP_19956928.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE17]
gi|432726547|ref|ZP_19961430.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE18]
gi|432731163|ref|ZP_19966002.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE45]
gi|432735964|ref|ZP_19970740.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE42]
gi|432740234|ref|ZP_19974956.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE23]
gi|432744375|ref|ZP_19979080.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE43]
gi|432748894|ref|ZP_19983517.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE29]
gi|432753235|ref|ZP_19987803.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE22]
gi|432758223|ref|ZP_19992746.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE46]
gi|432763729|ref|ZP_19998181.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE48]
gi|432769239|ref|ZP_20003612.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE50]
gi|432773618|ref|ZP_20007908.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE54]
gi|432777290|ref|ZP_20011544.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE59]
gi|432782346|ref|ZP_20016532.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE63]
gi|432786086|ref|ZP_20020254.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE65]
gi|432791687|ref|ZP_20025781.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE78]
gi|432797654|ref|ZP_20031682.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE79]
gi|432800721|ref|ZP_20034711.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE84]
gi|432804519|ref|ZP_20038465.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE91]
gi|432812550|ref|ZP_20046399.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE101]
gi|432813934|ref|ZP_20047745.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE115]
gi|432819757|ref|ZP_20053471.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE118]
gi|432825886|ref|ZP_20059543.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE123]
gi|432830426|ref|ZP_20064035.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE135]
gi|432833494|ref|ZP_20067042.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE136]
gi|432837987|ref|ZP_20071480.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE140]
gi|432842725|ref|ZP_20076146.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE141]
gi|432848216|ref|ZP_20080088.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE144]
gi|432859094|ref|ZP_20085268.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE146]
gi|432873100|ref|ZP_20092798.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE147]
gi|432879930|ref|ZP_20096750.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE154]
gi|432884404|ref|ZP_20099360.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE158]
gi|432893054|ref|ZP_20105159.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE165]
gi|432897225|ref|ZP_20108221.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE192]
gi|432902771|ref|ZP_20112451.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE194]
gi|432910124|ref|ZP_20117251.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE190]
gi|432932775|ref|ZP_20132629.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE184]
gi|432942311|ref|ZP_20139653.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE183]
gi|432945104|ref|ZP_20141399.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE196]
gi|432953571|ref|ZP_20145870.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE197]
gi|432959822|ref|ZP_20150108.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE202]
gi|432966549|ref|ZP_20155469.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE203]
gi|432970615|ref|ZP_20159493.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE207]
gi|432977160|ref|ZP_20165985.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE209]
gi|432984130|ref|ZP_20172869.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE215]
gi|432989543|ref|ZP_20178213.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE217]
gi|432994233|ref|ZP_20182850.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE218]
gi|432998652|ref|ZP_20187192.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE223]
gi|433003964|ref|ZP_20192402.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE227]
gi|433011172|ref|ZP_20199577.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE229]
gi|433012612|ref|ZP_20200995.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE104]
gi|433017394|ref|ZP_20205665.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE105]
gi|433022185|ref|ZP_20210211.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE106]
gi|433027480|ref|ZP_20215356.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE109]
gi|433031874|ref|ZP_20219689.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE112]
gi|433037374|ref|ZP_20224995.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE113]
gi|433041918|ref|ZP_20229453.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE117]
gi|433046509|ref|ZP_20233941.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE120]
gi|433051737|ref|ZP_20238975.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE122]
gi|433056776|ref|ZP_20243863.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE124]
gi|433061655|ref|ZP_20248621.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE125]
gi|433066646|ref|ZP_20253490.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE128]
gi|433071487|ref|ZP_20258189.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE129]
gi|433076636|ref|ZP_20263202.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE131]
gi|433081385|ref|ZP_20267860.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE133]
gi|433086042|ref|ZP_20272446.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE137]
gi|433090762|ref|ZP_20277070.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE138]
gi|433099986|ref|ZP_20286098.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE145]
gi|433109690|ref|ZP_20295570.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE150]
gi|433114389|ref|ZP_20300205.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE153]
gi|433118987|ref|ZP_20304701.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE157]
gi|433124006|ref|ZP_20309597.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE160]
gi|433128766|ref|ZP_20314246.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE163]
gi|433133586|ref|ZP_20318969.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE166]
gi|433138067|ref|ZP_20323354.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE167]
gi|433143000|ref|ZP_20328179.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE168]
gi|433147895|ref|ZP_20332961.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE174]
gi|433152582|ref|ZP_20337552.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE176]
gi|433157381|ref|ZP_20342257.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE177]
gi|433162252|ref|ZP_20347017.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE179]
gi|433167227|ref|ZP_20351903.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE180]
gi|433172308|ref|ZP_20356868.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE232]
gi|433176884|ref|ZP_20361351.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE82]
gi|433181971|ref|ZP_20366274.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE85]
gi|433187243|ref|ZP_20371372.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE88]
gi|433192368|ref|ZP_20376390.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE90]
gi|433197025|ref|ZP_20380954.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE94]
gi|433201859|ref|ZP_20385671.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE95]
gi|433206588|ref|ZP_20390289.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE97]
gi|433211368|ref|ZP_20394983.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE99]
gi|433324496|ref|ZP_20401783.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
J96]
gi|442590117|ref|ZP_21008901.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O10:K5(L):H4 str. ATCC 23506]
gi|442596445|ref|ZP_21014256.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O5:K4(L):H4 str. ATCC 23502]
gi|442606707|ref|ZP_21021502.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli Nissle 1917]
gi|443616466|ref|YP_007380322.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
APEC O78]
gi|444922756|ref|ZP_21242479.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 09BKT078844]
gi|444929078|ref|ZP_21248232.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0814]
gi|444934428|ref|ZP_21253372.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0815]
gi|444940007|ref|ZP_21258656.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0816]
gi|444945609|ref|ZP_21264031.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0839]
gi|444951154|ref|ZP_21269380.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0848]
gi|444956608|ref|ZP_21274610.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1753]
gi|444961971|ref|ZP_21279725.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1775]
gi|444967643|ref|ZP_21285120.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1793]
gi|444973145|ref|ZP_21290428.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1805]
gi|444978685|ref|ZP_21295683.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli ATCC 700728]
gi|444983979|ref|ZP_21300849.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA11]
gi|444989222|ref|ZP_21305964.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA19]
gi|444994576|ref|ZP_21311173.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA13]
gi|445000072|ref|ZP_21316536.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA2]
gi|445005528|ref|ZP_21321869.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA47]
gi|445010701|ref|ZP_21326895.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA48]
gi|445016483|ref|ZP_21332534.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA8]
gi|445021930|ref|ZP_21337853.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 7.1982]
gi|445027172|ref|ZP_21342952.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1781]
gi|445032667|ref|ZP_21348293.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1762]
gi|445038360|ref|ZP_21353831.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA35]
gi|445043575|ref|ZP_21358915.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.4880]
gi|445049147|ref|ZP_21364318.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.0083]
gi|445054797|ref|ZP_21369750.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0670]
gi|450185744|ref|ZP_21889214.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli SEPT362]
gi|450211062|ref|ZP_21894201.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O08]
gi|450239655|ref|ZP_21899082.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli S17]
gi|452969099|ref|ZP_21967326.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. EC4009]
gi|62288037|sp|P0A6H1.2|CLPX_ECOLI RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|62288038|sp|P0A6H2.2|CLPX_ECOL6 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|62288039|sp|P0A6H3.2|CLPX_ECO57 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|62288040|sp|P0A6H4.2|CLPX_SHIFL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|122424751|sp|Q1RF97.1|CLPX_ECOUT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|122957619|sp|Q0T7E5.1|CLPX_SHIF8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123049431|sp|Q0TKK3.1|CLPX_ECOL5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123563420|sp|Q32JJ4.1|CLPX_SHIDS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123617887|sp|Q3Z4W5.1|CLPX_SHISS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214775|sp|A1A8A7.1|CLPX_ECOK1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167009013|sp|A7ZIJ6.1|CLPX_ECO24 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167009014|sp|A7ZX96.1|CLPX_ECOHS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|189044134|sp|B1J010.1|CLPX_ECOLC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706586|sp|B7MD97.1|CLPX_ECO45 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706587|sp|B7NJ56.1|CLPX_ECO7I RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706588|sp|B7M3T1.1|CLPX_ECO8A RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706589|sp|B7N8Z2.1|CLPX_ECOLU RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706590|sp|B1LJJ5.1|CLPX_ECOSM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|229889854|sp|B1XFM6.1|CLPX_ECODH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238066655|sp|B5Z3U5.1|CLPX_ECO5E RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238066656|sp|B6HZP5.1|CLPX_ECOSE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238689516|sp|B2U4P3.1|CLPX_SHIB3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763846|sp|B7UJR1.1|CLPX_ECO27 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763847|sp|B7L675.1|CLPX_ECO55 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763848|sp|B7MQF4.1|CLPX_ECO81 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|259491256|sp|C4ZTJ5.1|CLPX_ECOBW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|12513300|gb|AAG54788.1|AE005223_3 ATP-dependent specificity component of clpP serine protease,
chaperone [Escherichia coli O157:H7 str. EDL933]
gi|26106847|gb|AAN79032.1|AE016756_215 ATP-dependent Clp protease ATP-binding subunit clpX [Escherichia
coli CFT073]
gi|347729|gb|AAA16116.1| ATP-dependent protease ATPase subunit [Escherichia coli]
gi|1773122|gb|AAB40194.1| ATP-dependent Clp proteinase [Escherichia coli]
gi|1786642|gb|AAC73541.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli str. K-12 substr. MG1655]
gi|13359949|dbj|BAB33915.1| ATP-dependent specificity component of clpP serine protease ClpX
[Escherichia coli O157:H7 str. Sakai]
gi|24050613|gb|AAN42039.1| ATP-dependent specificity component of clpP serine protease
[Shigella flexneri 2a str. 301]
gi|30040184|gb|AAP15917.1| ATP-dependent specificity component of clpP serine protease
[Shigella flexneri 2a str. 2457T]
gi|73854490|gb|AAZ87197.1| ATP-dependent specificity component of clpP serine protease,
chaperone [Shigella sonnei Ss046]
gi|81239803|gb|ABB60513.1| ATP-dependent specificity component of clpP serine protease
[Shigella dysenteriae Sd197]
gi|85674578|dbj|BAE76218.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli str. K12 substr. W3110]
gi|91071086|gb|ABE05967.1| ATP-dependent specificity component of ClpP serine protease,
chaperone [Escherichia coli UTI89]
gi|110342291|gb|ABG68528.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli 536]
gi|110614014|gb|ABF02681.1| ATP-dependent protease ATP-binding subunit protease [Shigella
flexneri 5 str. 8401]
gi|115511822|gb|ABI99896.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli APEC O1]
gi|157065645|gb|ABV04900.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli HS]
gi|157079685|gb|ABV19393.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli E24377A]
gi|169756117|gb|ACA78816.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli ATCC 8739]
gi|169887859|gb|ACB01566.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli str. K-12 substr. DH10B]
gi|170520500|gb|ACB18678.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli SMS-3-5]
gi|187427785|gb|ACD07059.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii CDC 3083-94]
gi|188488172|gb|EDU63275.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 53638]
gi|189002703|gb|EDU71689.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4076]
gi|189357986|gb|EDU76405.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4401]
gi|189362383|gb|EDU80802.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4486]
gi|189373571|gb|EDU91987.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC869]
gi|192929193|gb|EDV82803.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli E22]
gi|208727204|gb|EDZ76805.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4206]
gi|208731523|gb|EDZ80211.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4045]
gi|208737100|gb|EDZ84784.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4042]
gi|209160302|gb|ACI37735.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4115]
gi|209743844|gb|ACI70229.1| ATP-dependent specificity component of clpP serine protease ClpX
[Escherichia coli]
gi|209743846|gb|ACI70230.1| ATP-dependent specificity component of clpP serine protease ClpX
[Escherichia coli]
gi|209743848|gb|ACI70231.1| ATP-dependent specificity component of clpP serine protease ClpX
[Escherichia coli]
gi|209743850|gb|ACI70232.1| ATP-dependent specificity component of clpP serine protease ClpX
[Escherichia coli]
gi|209743852|gb|ACI70233.1| ATP-dependent specificity component of clpP serine protease ClpX
[Escherichia coli]
gi|209910914|dbj|BAG75988.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
SE11]
gi|215263591|emb|CAS07921.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O127:H6 str. E2348/69]
gi|217322070|gb|EEC30494.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. TW14588]
gi|218350633|emb|CAU96325.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli 55989]
gi|218359773|emb|CAQ97314.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli IAI1]
gi|218364117|emb|CAR01782.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli S88]
gi|218368636|emb|CAR16375.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli IAI39]
gi|218425866|emb|CAR06672.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli ED1a]
gi|218430819|emb|CAR11693.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli UMN026]
gi|222032233|emb|CAP74972.1| ATP-dependent Clp protease ATP-binding subunit clpX [Escherichia
coli LF82]
gi|226898777|gb|EEH85036.1| ATP-dependent protease ATP-binding subunit [Escherichia sp.
3_2_53FAA]
gi|227838637|gb|EEJ49103.1| ATP-dependent protease ATP-binding subunit [Escherichia coli 83972]
gi|238860036|gb|ACR62034.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli BW2952]
gi|242376219|emb|CAQ30910.1| clpX, subunit of ClpX ATP-dependent protease specificity component
and chaperone, ClpXP and ClpAXP [Escherichia coli
BL21(DE3)]
gi|253325617|gb|ACT30219.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|253972408|gb|ACT38079.1| ATP-dependent protease ATP-binding subunit [Escherichia coli B str.
REL606]
gi|253976618|gb|ACT42288.1| ATP-dependent protease ATP-binding subunit [Escherichia coli
BL21(DE3)]
gi|254591022|gb|ACT70383.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O157:H7 str. TW14359]
gi|257752310|dbj|BAI23812.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O26:H11 str. 11368]
gi|257757786|dbj|BAI29283.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O103:H2 str. 12009]
gi|257762955|dbj|BAI34450.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O111:H- str. 11128]
gi|260450375|gb|ACX40797.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DH1]
gi|281599778|gb|ADA72762.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shigella
flexneri 2002017]
gi|284920248|emb|CBG33307.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
042]
gi|290761218|gb|ADD55179.1| ATP-dependent Clp protease ATP-binding subunit clpX [Escherichia
coli O55:H7 str. CB9615]
gi|291325037|gb|EFE64452.1| ATP-dependent Clp protease [Escherichia coli B088]
gi|291429412|gb|EFF02432.1| ClpX [Escherichia coli FVEC1412]
gi|291433751|gb|EFF06724.1| ATP-dependent Clp protease [Escherichia coli B185]
gi|291464929|gb|ADE05991.1| ATP-dependent protease ClpX [Escherichia coli]
gi|291471766|gb|EFF14249.1| ATP-dependent Clp protease [Escherichia coli B354]
gi|294493190|gb|ADE91946.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli IHE3034]
gi|298280284|gb|EFI21788.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli FVEC1302]
gi|299880020|gb|EFI88231.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 196-1]
gi|300304192|gb|EFJ58712.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 200-1]
gi|300315273|gb|EFJ65057.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 175-1]
gi|300355990|gb|EFJ71860.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 198-1]
gi|300397449|gb|EFJ80987.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 69-1]
gi|300404589|gb|EFJ88127.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 84-1]
gi|300407559|gb|EFJ91097.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 45-1]
gi|300414630|gb|EFJ97940.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 115-1]
gi|300419618|gb|EFK02929.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 182-1]
gi|300452509|gb|EFK16129.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 116-1]
gi|300457886|gb|EFK21379.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 21-1]
gi|300527101|gb|EFK48170.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 119-7]
gi|300529121|gb|EFK50183.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 107-1]
gi|300843086|gb|EFK70846.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 124-1]
gi|301074509|gb|EFK89315.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 146-1]
gi|305853857|gb|EFM54296.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
NC101]
gi|306907686|gb|EFN38188.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli W]
gi|307552345|gb|ADN45120.1| ATP-dependent specificity component of ClpP serine protease
[Escherichia coli ABU 83972]
gi|307628092|gb|ADN72396.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
UM146]
gi|308121482|gb|EFO58744.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 145-7]
gi|308924608|gb|EFP70103.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
dysenteriae 1617]
gi|309700699|emb|CBI99995.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
ETEC H10407]
gi|310337183|gb|EFQ02321.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 1827-70]
gi|312290771|gb|EFR18648.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2362-75]
gi|312945016|gb|ADR25843.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O83:H1 str. NRG 857C]
gi|313646935|gb|EFS11392.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2a str. 2457T]
gi|315059718|gb|ADT74045.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli W]
gi|315135120|dbj|BAJ42279.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli DH1]
gi|315256266|gb|EFU36234.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 85-1]
gi|315289844|gb|EFU49234.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 110-3]
gi|315294228|gb|EFU53579.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 153-1]
gi|315299562|gb|EFU58810.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 16-3]
gi|315616621|gb|EFU97238.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3431]
gi|320186068|gb|EFW60813.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shigella
flexneri CDC 796-83]
gi|320192854|gb|EFW67494.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC1212]
gi|320197088|gb|EFW71707.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli WV_060327]
gi|320201682|gb|EFW76258.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli EC4100B]
gi|320638433|gb|EFX08147.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. G5101]
gi|320643814|gb|EFX12937.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H- str. 493-89]
gi|320649165|gb|EFX17743.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H- str. H 2687]
gi|320656058|gb|EFX23974.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320661208|gb|EFX28639.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O55:H7 str. USDA 5905]
gi|320665184|gb|EFX32277.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. LSU-61]
gi|323153475|gb|EFZ39729.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EPECa14]
gi|323160451|gb|EFZ46399.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli E128010]
gi|323164239|gb|EFZ50046.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 53G]
gi|323170524|gb|EFZ56174.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli LT-68]
gi|323178293|gb|EFZ63871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli OK1180]
gi|323184731|gb|EFZ70102.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli OK1357]
gi|323191358|gb|EFZ76621.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli RN587/1]
gi|323379717|gb|ADX51985.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli KO11FL]
gi|323938624|gb|EGB34873.1| ATP-dependent Clp protease [Escherichia coli E1520]
gi|323943245|gb|EGB39401.1| ATP-dependent Clp protease [Escherichia coli E482]
gi|323945343|gb|EGB41399.1| ATP-dependent Clp protease [Escherichia coli H120]
gi|323952950|gb|EGB48818.1| ATP-dependent Clp protease [Escherichia coli H252]
gi|323958631|gb|EGB54334.1| ATP-dependent Clp protease [Escherichia coli H263]
gi|323963428|gb|EGB58990.1| ATP-dependent Clp protease [Escherichia coli H489]
gi|323965125|gb|EGB60584.1| ATP-dependent Clp protease [Escherichia coli M863]
gi|323972292|gb|EGB67502.1| ATP-dependent Clp protease [Escherichia coli TA007]
gi|323976077|gb|EGB71170.1| ATP-dependent Clp protease [Escherichia coli TW10509]
gi|324010069|gb|EGB79288.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 57-2]
gi|324010652|gb|EGB79871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 60-1]
gi|324016701|gb|EGB85920.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 117-3]
gi|324116926|gb|EGC10839.1| ATP-dependent Clp protease [Escherichia coli E1167]
gi|326341202|gb|EGD64994.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. 1044]
gi|326346023|gb|EGD69762.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. 1125]
gi|327254766|gb|EGE66382.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_7v]
gi|330910232|gb|EGH38742.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli AA86]
gi|331037756|gb|EGI09976.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli H736]
gi|331045776|gb|EGI17902.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli M605]
gi|331051117|gb|EGI23169.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli M718]
gi|331054743|gb|EGI26752.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA206]
gi|331060241|gb|EGI32205.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA143]
gi|331066017|gb|EGI37901.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA271]
gi|331070974|gb|EGI42333.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA280]
gi|331076168|gb|EGI47450.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli H591]
gi|331081035|gb|EGI52200.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli H299]
gi|332094594|gb|EGI99640.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 5216-82]
gi|332098459|gb|EGJ03425.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 3594-74]
gi|332103941|gb|EGJ07287.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Shigella sp. D9]
gi|332341802|gb|AEE55136.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli UMNK88]
gi|332760729|gb|EGJ91017.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 4343-70]
gi|332761521|gb|EGJ91803.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2747-71]
gi|332763736|gb|EGJ93974.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-671]
gi|332768359|gb|EGJ98543.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2930-71]
gi|333007845|gb|EGK27321.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-218]
gi|333008124|gb|EGK27599.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri VA-6]
gi|333010899|gb|EGK30325.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-272]
gi|333020700|gb|EGK39960.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-227]
gi|333021843|gb|EGK41091.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-304]
gi|335577005|gb|EGM63238.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri J1713]
gi|338771516|gb|EGP26256.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli PCN033]
gi|339413387|gb|AEJ55059.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli UMNF18]
gi|340741503|gb|EGR75649.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. LB226692]
gi|341921033|gb|EGT70637.1| clpX [Escherichia coli O104:H4 str. C227-11]
gi|342362474|gb|EGU26592.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
XH140A]
gi|342930643|gb|EGU99365.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 79-10]
gi|344193755|gb|EGV47833.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
XH001]
gi|345341458|gb|EGW73863.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_C165-02]
gi|345344082|gb|EGW76458.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_B2F1]
gi|345345294|gb|EGW77640.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2534-86]
gi|345354065|gb|EGW86292.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_94C]
gi|345361731|gb|EGW93889.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3030-1]
gi|345365644|gb|EGW97751.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_DG131-3]
gi|345365956|gb|EGW98054.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_EH250]
gi|345377685|gb|EGX09616.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_MHI813]
gi|345381199|gb|EGX13084.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli G58-1]
gi|345386282|gb|EGX16117.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_H.1.8]
gi|345391233|gb|EGX21027.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_S1191]
gi|345395482|gb|EGX25226.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TX1999]
gi|349736548|gb|AEQ11254.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O7:K1 str. CE10]
gi|354858264|gb|EHF18715.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 04-8351]
gi|354860140|gb|EHF20587.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. C227-11]
gi|354866836|gb|EHF27259.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. C236-11]
gi|354877172|gb|EHF37532.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 09-7901]
gi|354879479|gb|EHF39817.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4404]
gi|354884066|gb|EHF44380.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-3677]
gi|354885867|gb|EHF46159.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4522]
gi|354888934|gb|EHF49188.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4623]
gi|354901535|gb|EHF61662.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C1]
gi|354905766|gb|EHF65849.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C2]
gi|354908273|gb|EHF68329.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C3]
gi|354918745|gb|EHF78701.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C5]
gi|354922433|gb|EHF82348.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C4]
gi|355418926|gb|AER83123.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
str. 'clone D i2']
gi|355423846|gb|AER88042.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
str. 'clone D i14']
gi|359331198|dbj|BAL37645.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli str. K-12 substr. MDS42]
gi|371594123|gb|EHN82995.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli H494]
gi|371595519|gb|EHN84368.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli TA124]
gi|371604297|gb|EHN92926.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli B093]
gi|371611431|gb|EHN99953.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli H397]
gi|371612951|gb|EHO01454.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli E101]
gi|373248399|gb|EHP67829.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli 4_1_47FAA]
gi|374357450|gb|AEZ39157.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O55:H7 str. RM12579]
gi|375323617|gb|EHS69322.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H43 str. T22]
gi|377848891|gb|EHU13867.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1A]
gi|377850930|gb|EHU15885.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1C]
gi|377854085|gb|EHU18975.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1B]
gi|377862761|gb|EHU27568.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1D]
gi|377866874|gb|EHU31638.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1E]
gi|377868229|gb|EHU32973.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2A]
gi|377879180|gb|EHU43753.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2B]
gi|377883933|gb|EHU48451.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2D]
gi|377885904|gb|EHU50395.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2C]
gi|377898426|gb|EHU62786.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2E]
gi|377900620|gb|EHU64952.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3A]
gi|377902536|gb|EHU66840.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3B]
gi|377914361|gb|EHU78484.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3C]
gi|377918754|gb|EHU82801.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3D]
gi|377920841|gb|EHU84856.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3E]
gi|377932287|gb|EHU96141.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3F]
gi|377934477|gb|EHU98308.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4A]
gi|377940608|gb|EHV04357.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4B]
gi|377950680|gb|EHV14307.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4C]
gi|377951519|gb|EHV15138.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4D]
gi|377955448|gb|EHV19004.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4E]
gi|377966084|gb|EHV29497.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5A]
gi|377967397|gb|EHV30803.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4F]
gi|377973510|gb|EHV36850.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5B]
gi|377981473|gb|EHV44732.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5D]
gi|377981809|gb|EHV45067.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5C]
gi|377988580|gb|EHV51758.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5E]
gi|378000302|gb|EHV63376.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6A]
gi|378001422|gb|EHV64481.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6B]
gi|378003855|gb|EHV66895.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6C]
gi|378014253|gb|EHV77159.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6D]
gi|378017177|gb|EHV80052.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6E]
gi|378018840|gb|EHV81686.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7A]
gi|378027888|gb|EHV90513.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7C]
gi|378032403|gb|EHV94984.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7D]
gi|378037730|gb|EHW00253.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7B]
gi|378042336|gb|EHW04785.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7E]
gi|378052756|gb|EHW15058.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8A]
gi|378057135|gb|EHW19370.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8B]
gi|378063095|gb|EHW25265.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8C]
gi|378069190|gb|EHW31285.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8D]
gi|378072757|gb|EHW34814.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8E]
gi|378081869|gb|EHW43817.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9A]
gi|378082780|gb|EHW44723.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9B]
gi|378090508|gb|EHW52345.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9C]
gi|378095203|gb|EHW56993.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9D]
gi|378102387|gb|EHW64064.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9E]
gi|378107901|gb|EHW69519.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10A]
gi|378116923|gb|EHW78441.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10B]
gi|378119184|gb|EHW80679.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10C]
gi|378121707|gb|EHW83158.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10D]
gi|378134749|gb|EHW96070.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10E]
gi|378136537|gb|EHW97831.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11A]
gi|378139985|gb|EHX01215.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10F]
gi|378147353|gb|EHX08501.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11B]
gi|378153095|gb|EHX14181.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11D]
gi|378157258|gb|EHX18300.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11C]
gi|378161714|gb|EHX22690.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11E]
gi|378175103|gb|EHX35922.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12A]
gi|378175609|gb|EHX36425.1| ATP-dependent protease Clp, ATPase subunit [Escherichia coli
DEC12B]
gi|378177103|gb|EHX37904.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12C]
gi|378190585|gb|EHX51169.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13A]
gi|378191145|gb|EHX51721.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12E]
gi|378191958|gb|EHX52532.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12D]
gi|378204181|gb|EHX64597.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13B]
gi|378208330|gb|EHX68714.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13D]
gi|378209339|gb|EHX69713.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13C]
gi|378219747|gb|EHX80014.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13E]
gi|378221928|gb|EHX82170.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14A]
gi|378226321|gb|EHX86508.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14B]
gi|378234470|gb|EHX94548.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14C]
gi|378237159|gb|EHX97186.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14D]
gi|378244657|gb|EHY04599.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15A]
gi|378251879|gb|EHY11775.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15B]
gi|378252209|gb|EHY12103.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15C]
gi|378257939|gb|EHY17775.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15D]
gi|378261235|gb|EHY21030.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15E]
gi|380349369|gb|EIA37641.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
SCI-07]
gi|383394282|gb|AFH19240.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
KO11FL]
gi|383403933|gb|AFH10176.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
W]
gi|383465982|gb|EID61003.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella flexneri
5a str. M90T]
gi|383474514|gb|EID66500.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
W26]
gi|384377969|gb|EIE35861.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
J53]
gi|384471621|gb|EIE55694.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
AI27]
gi|385155300|gb|EIF17304.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O32:H37 str. P4]
gi|385539925|gb|EIF86752.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli M919]
gi|385704857|gb|EIG41929.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli B799]
gi|385712909|gb|EIG49848.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli H730]
gi|386123462|gb|EIG72058.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
sp. 4_1_40B]
gi|386141486|gb|EIG82636.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 1.2741]
gi|386150551|gb|EIH01840.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5.0588]
gi|386157207|gb|EIH13549.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0259]
gi|386164002|gb|EIH25788.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 1.2264]
gi|386169473|gb|EIH35981.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0497]
gi|386170551|gb|EIH42604.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0741]
gi|386176095|gb|EIH53574.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.2608]
gi|386186396|gb|EIH69112.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93.0624]
gi|386192019|gb|EIH80760.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 4.0522]
gi|386193083|gb|EIH87382.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli JB1-95]
gi|386199500|gb|EIH98491.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.154]
gi|386206015|gb|EII10521.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5.0959]
gi|386209543|gb|EII20030.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 9.0111]
gi|386216840|gb|EII33329.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 4.0967]
gi|386225864|gb|EII48189.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2.3916]
gi|386230076|gb|EII57431.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.3884]
gi|386236866|gb|EII68838.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2.4168]
gi|386242033|gb|EII78946.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.2303]
gi|386242865|gb|EII84600.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3003]
gi|386247647|gb|EII93820.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW07793]
gi|386252554|gb|EIJ02245.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli B41]
gi|386257289|gb|EIJ12780.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 900105 (10e)]
gi|388341953|gb|EIL08030.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9534]
gi|388345222|gb|EIL11008.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O103:H25 str. CVM9340]
gi|388346437|gb|EIL12154.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O103:H2 str. CVM9450]
gi|388360310|gb|EIL24531.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9570]
gi|388361233|gb|EIL25367.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9545]
gi|388368619|gb|EIL32244.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9574]
gi|388377633|gb|EIL40428.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM9942]
gi|388379314|gb|EIL41984.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O26:H11 str. CVM10026]
gi|388383820|gb|EIL45568.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
KD1]
gi|388394240|gb|EIL55543.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
541-15]
gi|388395244|gb|EIL56468.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
KD2]
gi|388398325|gb|EIL59245.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
576-1]
gi|388400949|gb|EIL61634.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
75]
gi|388406307|gb|EIL66713.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
541-1]
gi|388415405|gb|EIL75335.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
HM605]
gi|388420455|gb|EIL80147.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
CUMT8]
gi|390650914|gb|EIN29287.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1996]
gi|390652872|gb|EIN31044.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA517]
gi|390653353|gb|EIN31500.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA505]
gi|390669797|gb|EIN46390.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93-001]
gi|390673008|gb|EIN49261.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1990]
gi|390674060|gb|EIN50267.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1985]
gi|390688661|gb|EIN63693.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA3]
gi|390692171|gb|EIN66869.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA9]
gi|390693117|gb|EIN67757.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA5]
gi|390708496|gb|EIN81716.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA10]
gi|390710349|gb|EIN83371.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA15]
gi|390713048|gb|EIN85991.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA14]
gi|390720357|gb|EIN93069.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA22]
gi|390733890|gb|EIO05451.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA25]
gi|390733931|gb|EIO05490.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA24]
gi|390737015|gb|EIO08330.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA28]
gi|390752272|gb|EIO22118.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA31]
gi|390752753|gb|EIO22559.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA32]
gi|390755180|gb|EIO24728.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA33]
gi|390762422|gb|EIO31680.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA40]
gi|390776244|gb|EIO44195.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA41]
gi|390778642|gb|EIO46399.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA42]
gi|390784193|gb|EIO51766.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA39]
gi|390785791|gb|EIO53333.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW06591]
gi|390795065|gb|EIO62350.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW10246]
gi|390801805|gb|EIO68856.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW11039]
gi|390810317|gb|EIO77078.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW07945]
gi|390812007|gb|EIO78692.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW09109]
gi|390819406|gb|EIO85739.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW10119]
gi|390823112|gb|EIO89184.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW09098]
gi|390837266|gb|EIP01697.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4203]
gi|390840073|gb|EIP04132.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4196]
gi|390842295|gb|EIP06149.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW09195]
gi|390855683|gb|EIP18365.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW14301]
gi|390860078|gb|EIP22405.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4421]
gi|390860499|gb|EIP22813.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW14313]
gi|390871774|gb|EIP33154.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4422]
gi|390876376|gb|EIP37362.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4013]
gi|390886183|gb|EIP46321.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4402]
gi|390888167|gb|EIP48063.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4439]
gi|390894981|gb|EIP54471.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4436]
gi|390904185|gb|EIP63201.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1738]
gi|390910584|gb|EIP69315.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4437]
gi|390911824|gb|EIP70505.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1734]
gi|390915106|gb|EIP73624.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4448]
gi|390925021|gb|EIP82757.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1863]
gi|390926191|gb|EIP83785.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1845]
gi|391254799|gb|EIQ13958.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2850-71]
gi|391256935|gb|EIQ16057.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri CCH060]
gi|391259140|gb|EIQ18215.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-1770]
gi|391273844|gb|EIQ32662.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-404]
gi|391288800|gb|EIQ47299.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 3226-85]
gi|391289062|gb|EIQ47558.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 4444-74]
gi|391289279|gb|EIQ47774.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 3233-85]
gi|391296885|gb|EIQ54961.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 4822-66]
gi|391309585|gb|EIQ67253.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EPECa12]
gi|391315323|gb|EIQ72856.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EPEC C342-62]
gi|391320476|gb|EIQ77311.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 1235-66]
gi|394390768|gb|EJE67728.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9602]
gi|394394617|gb|EJE71180.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O26:H11 str. CVM10224]
gi|394399938|gb|EJE75899.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9634]
gi|394405881|gb|EJE80978.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9553]
gi|394409053|gb|EJE83640.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9455]
gi|394411992|gb|EJE86172.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM10021]
gi|394431103|gb|EJF03346.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM10030]
gi|394433366|gb|EJF05398.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM9952]
gi|397786921|gb|EJK97752.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_O31]
gi|397901492|gb|EJL17838.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 6603-63]
gi|397903015|gb|EJL19322.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei str. Moseley]
gi|404292799|gb|EJZ49590.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
sp. 1_1_43]
gi|404341889|gb|EJZ68291.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 1485-80]
gi|406779096|gb|AFS58520.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|407055679|gb|AFS75730.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 2011C-3493]
gi|407063923|gb|AFS84970.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|408072550|gb|EKH06871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA7]
gi|408076059|gb|EKH10288.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK920]
gi|408086072|gb|EKH19614.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA34]
gi|408090668|gb|EKH23939.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA506]
gi|408095713|gb|EKH28678.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA507]
gi|408102856|gb|EKH35245.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA504]
gi|408110229|gb|EKH42056.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1999]
gi|408116883|gb|EKH48150.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1997]
gi|408122384|gb|EKH53246.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli NE1487]
gi|408130434|gb|EKH60582.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli NE037]
gi|408132503|gb|EKH62479.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK2001]
gi|408141625|gb|EKH71080.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA4]
gi|408150525|gb|EKH79107.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA23]
gi|408153413|gb|EKH81808.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA49]
gi|408158627|gb|EKH86744.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA45]
gi|408167183|gb|EKH94710.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TT12B]
gi|408172669|gb|EKH99732.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MA6]
gi|408174741|gb|EKI01705.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5905]
gi|408187057|gb|EKI13038.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli CB7326]
gi|408192242|gb|EKI17819.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC96038]
gi|408192339|gb|EKI17915.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5412]
gi|408198910|gb|EKI24121.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW15901]
gi|408206226|gb|EKI31038.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW00353]
gi|408207167|gb|EKI31921.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli ARS4.2123]
gi|408218930|gb|EKI43112.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3006]
gi|408221640|gb|EKI45573.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 07798]
gi|408232197|gb|EKI55448.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli N1]
gi|408233176|gb|EKI56311.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA38]
gi|408239285|gb|EKI62038.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1735]
gi|408249191|gb|EKI71143.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1736]
gi|408253460|gb|EKI75054.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1737]
gi|408259574|gb|EKI80733.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1846]
gi|408268457|gb|EKI88813.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1847]
gi|408270232|gb|EKI90441.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1848]
gi|408278943|gb|EKI98610.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1849]
gi|408285382|gb|EKJ04412.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1850]
gi|408288147|gb|EKJ06985.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1856]
gi|408300618|gb|EKJ18303.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1862]
gi|408301170|gb|EKJ18824.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1864]
gi|408310093|gb|EKJ27177.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1865]
gi|408318347|gb|EKJ34562.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1868]
gi|408318838|gb|EKJ35040.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1866]
gi|408331656|gb|EKJ46800.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1869]
gi|408337176|gb|EKJ51912.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli NE098]
gi|408338661|gb|EKJ53307.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1870]
gi|408347913|gb|EKJ62056.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 0.1288]
gi|408350693|gb|EKJ64541.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK523]
gi|408353295|gb|EKJ66817.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 0.1304]
gi|408457120|gb|EKJ80921.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
AD30]
gi|408559015|gb|EKK35358.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5.2239]
gi|408559379|gb|EKK35702.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.4870]
gi|408560350|gb|EKK36614.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 6.0172]
gi|408573158|gb|EKK49017.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0566]
gi|408573671|gb|EKK49501.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0569]
gi|408585479|gb|EKK60346.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0586]
gi|408590505|gb|EKK64980.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.2524]
gi|408592320|gb|EKK66712.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 10.0833]
gi|408604557|gb|EKK78131.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 10.0869]
gi|408605963|gb|EKK79443.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0416]
gi|408611154|gb|EKK84516.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 88.0221]
gi|408617329|gb|EKK90451.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 10.0821]
gi|412961687|emb|CCK45594.1| ATP-dependent specificity component of clpP serine protease
[Escherichia coli chi7122]
gi|412968302|emb|CCJ42919.1| ATP-dependent specificity component of clpP serine protease,
chaperone [Escherichia coli]
gi|421934147|gb|EKT91924.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O111:H11 str. CFSAN001630]
gi|421945315|gb|EKU02532.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O26:H11 str. CFSAN001629]
gi|421946797|gb|EKU03911.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O111:H8 str. CFSAN001632]
gi|427214752|gb|EKV84024.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 88.1042]
gi|427217282|gb|EKV86351.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 89.0511]
gi|427217768|gb|EKV86820.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 88.1467]
gi|427234005|gb|EKW01714.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 90.2281]
gi|427234226|gb|EKW01925.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 90.0039]
gi|427236319|gb|EKW03900.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 90.0091]
gi|427251582|gb|EKW18145.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93.0056]
gi|427253164|gb|EKW19607.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93.0055]
gi|427254458|gb|EKW20819.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 94.0618]
gi|427270576|gb|EKW35454.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.0943]
gi|427271064|gb|EKW35913.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.0183]
gi|427276297|gb|EKW40871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.1288]
gi|427286556|gb|EKW50394.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0428]
gi|427292271|gb|EKW55625.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0427]
gi|427293896|gb|EKW57116.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0939]
gi|427304914|gb|EKW67534.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0003]
gi|427306554|gb|EKW69073.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0932]
gi|427311008|gb|EKW73228.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0107]
gi|427321630|gb|EKW83309.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.1742]
gi|427322537|gb|EKW84168.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0007]
gi|427334471|gb|EKW95540.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0713]
gi|427334774|gb|EKW95842.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0678]
gi|427336798|gb|EKW97747.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0672]
gi|429260205|gb|EKY43798.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0109]
gi|429261865|gb|EKY45257.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0010]
gi|429351547|gb|EKY88267.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02030]
gi|429352250|gb|EKY88966.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02033-1]
gi|429353008|gb|EKY89717.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02092]
gi|429366921|gb|EKZ03522.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02093]
gi|429367832|gb|EKZ04424.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02281]
gi|429370327|gb|EKZ06893.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02318]
gi|429382714|gb|EKZ19178.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02913]
gi|429384947|gb|EKZ21401.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-03943]
gi|429385470|gb|EKZ21923.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-03439]
gi|429397163|gb|EKZ33510.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-04080]
gi|429399391|gb|EKZ35712.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-9450]
gi|429399699|gb|EKZ36019.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-9990]
gi|429410453|gb|EKZ46675.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4984]
gi|429412353|gb|EKZ48550.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4986]
gi|429419338|gb|EKZ55476.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4987]
gi|429427897|gb|EKZ63977.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-5603]
gi|429434741|gb|EKZ70765.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4988]
gi|429435565|gb|EKZ71583.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-5604]
gi|429440106|gb|EKZ76085.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec12-0465]
gi|429444706|gb|EKZ80651.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-6006]
gi|429451011|gb|EKZ86903.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec12-0466]
gi|429456503|gb|EKZ92348.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-9941]
gi|430879592|gb|ELC02923.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE4]
gi|430880734|gb|ELC04009.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE2]
gi|430888883|gb|ELC11554.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE10]
gi|430891424|gb|ELC13960.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE5]
gi|430901425|gb|ELC23393.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE12]
gi|430909944|gb|ELC31302.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE16]
gi|430912045|gb|ELC33296.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE15]
gi|430918694|gb|ELC39695.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE25]
gi|430922723|gb|ELC43470.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE21]
gi|430929270|gb|ELC49781.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE26]
gi|430932804|gb|ELC53223.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE28]
gi|430938443|gb|ELC58684.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE39]
gi|430947422|gb|ELC67120.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE181]
gi|430956176|gb|ELC74852.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE187]
gi|430966662|gb|ELC84025.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE188]
gi|430969561|gb|ELC86665.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE189]
gi|430974576|gb|ELC91499.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE193]
gi|430976250|gb|ELC93125.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE191]
gi|430985238|gb|ELD01844.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE201]
gi|430992493|gb|ELD08864.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE204]
gi|430997201|gb|ELD13468.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE205]
gi|430999938|gb|ELD16012.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE206]
gi|431010398|gb|ELD24746.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE208]
gi|431010816|gb|ELD25160.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE210]
gi|431013140|gb|ELD26874.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE213]
gi|431018568|gb|ELD31999.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE212]
gi|431027823|gb|ELD40868.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE214]
gi|431042148|gb|ELD52640.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE220]
gi|431044966|gb|ELD55221.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE224]
gi|431045629|gb|ELD55859.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE228]
gi|431054711|gb|ELD64280.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE230]
gi|431057197|gb|ELD66667.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE233]
gi|431063819|gb|ELD73033.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE234]
gi|431064546|gb|ELD73413.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE235]
gi|431078331|gb|ELD85389.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE236]
gi|431085331|gb|ELD91444.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE237]
gi|431087078|gb|ELD93083.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE47]
gi|431099581|gb|ELE04601.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE51]
gi|431103110|gb|ELE07780.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE53]
gi|431108817|gb|ELE12788.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE56]
gi|431110771|gb|ELE14688.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE55]
gi|431119565|gb|ELE22564.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE57]
gi|431124017|gb|ELE26671.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE58]
gi|431133001|gb|ELE34999.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE60]
gi|431133990|gb|ELE35956.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE62]
gi|431140545|gb|ELE42311.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE67]
gi|431144002|gb|ELE45710.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE66]
gi|431151485|gb|ELE52500.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE72]
gi|431158152|gb|ELE58773.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE75]
gi|431162900|gb|ELE63340.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE76]
gi|431165157|gb|ELE65515.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE77]
gi|431174034|gb|ELE74095.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE81]
gi|431174527|gb|ELE74572.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE80]
gi|431184354|gb|ELE84112.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE86]
gi|431185132|gb|ELE84862.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE83]
gi|431193337|gb|ELE92673.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE87]
gi|431195633|gb|ELE94602.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE93]
gi|431203797|gb|ELF02387.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE111]
gi|431204694|gb|ELF03252.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE116]
gi|431207362|gb|ELF05619.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE142]
gi|431213760|gb|ELF11616.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE119]
gi|431225053|gb|ELF22262.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE143]
gi|431225242|gb|ELF22447.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE156]
gi|431230816|gb|ELF26586.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE161]
gi|431246949|gb|ELF41192.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE169]
gi|431259674|gb|ELF52037.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE8]
gi|431267054|gb|ELF58587.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE9]
gi|431268363|gb|ELF59837.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE17]
gi|431276655|gb|ELF67675.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE18]
gi|431278567|gb|ELF69557.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE45]
gi|431286363|gb|ELF77189.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE23]
gi|431286852|gb|ELF77672.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE42]
gi|431295829|gb|ELF85561.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE43]
gi|431300632|gb|ELF90183.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE29]
gi|431305616|gb|ELF93937.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE22]
gi|431312009|gb|ELG00157.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE46]
gi|431313381|gb|ELG01354.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE48]
gi|431319279|gb|ELG06963.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE50]
gi|431320739|gb|ELG08369.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE54]
gi|431330864|gb|ELG18128.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE59]
gi|431332058|gb|ELG19301.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE63]
gi|431342017|gb|ELG29013.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE65]
gi|431342483|gb|ELG29462.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE78]
gi|431345874|gb|ELG32788.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE79]
gi|431351310|gb|ELG38100.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE84]
gi|431357442|gb|ELG44109.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE101]
gi|431357852|gb|ELG44518.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE91]
gi|431368953|gb|ELG55184.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE115]
gi|431370759|gb|ELG56552.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE118]
gi|431375270|gb|ELG60614.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE123]
gi|431380188|gb|ELG65088.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE135]
gi|431388656|gb|ELG72379.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE136]
gi|431391890|gb|ELG75494.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE140]
gi|431397253|gb|ELG80709.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE141]
gi|431402565|gb|ELG85877.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE144]
gi|431405201|gb|ELG88444.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE147]
gi|431408149|gb|ELG91341.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE146]
gi|431413554|gb|ELG96319.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE154]
gi|431419992|gb|ELH02326.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE158]
gi|431425506|gb|ELH07576.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE165]
gi|431430035|gb|ELH11869.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE192]
gi|431437416|gb|ELH18926.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE194]
gi|431447199|gb|ELH27941.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE190]
gi|431454779|gb|ELH35137.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE183]
gi|431456808|gb|ELH37151.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE184]
gi|431463012|gb|ELH43206.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE196]
gi|431470701|gb|ELH50598.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE197]
gi|431475910|gb|ELH55714.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE203]
gi|431478717|gb|ELH58462.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE202]
gi|431482264|gb|ELH61967.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE209]
gi|431485752|gb|ELH65409.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE207]
gi|431498788|gb|ELH77973.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE217]
gi|431506267|gb|ELH84865.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE215]
gi|431509567|gb|ELH87816.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE218]
gi|431514221|gb|ELH92063.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE223]
gi|431517285|gb|ELH94807.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE227]
gi|431519384|gb|ELH96836.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE229]
gi|431535947|gb|ELI12282.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE104]
gi|431537564|gb|ELI13681.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE105]
gi|431541070|gb|ELI16520.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE106]
gi|431545990|gb|ELI20633.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE109]
gi|431555550|gb|ELI29390.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE113]
gi|431560181|gb|ELI33702.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE112]
gi|431560391|gb|ELI33905.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE117]
gi|431572898|gb|ELI45722.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE120]
gi|431574219|gb|ELI47001.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE124]
gi|431575872|gb|ELI48595.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE122]
gi|431588359|gb|ELI59644.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE125]
gi|431591181|gb|ELI62181.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE128]
gi|431593674|gb|ELI63966.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE129]
gi|431601213|gb|ELI70730.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE131]
gi|431606030|gb|ELI75414.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE133]
gi|431610204|gb|ELI79505.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE137]
gi|431615214|gb|ELI84344.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE138]
gi|431622852|gb|ELI91537.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE145]
gi|431631767|gb|ELJ00073.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE150]
gi|431636889|gb|ELJ05008.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE153]
gi|431649336|gb|ELJ16694.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE157]
gi|431650109|gb|ELJ17446.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE160]
gi|431651636|gb|ELJ18875.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE163]
gi|431663401|gb|ELJ30163.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE166]
gi|431665036|gb|ELJ31763.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE167]
gi|431666688|gb|ELJ33315.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE168]
gi|431676788|gb|ELJ42871.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE174]
gi|431678638|gb|ELJ44634.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE176]
gi|431682067|gb|ELJ47836.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE177]
gi|431692290|gb|ELJ57728.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE179]
gi|431694182|gb|ELJ59567.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE180]
gi|431696253|gb|ELJ61440.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE232]
gi|431709789|gb|ELJ74237.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE88]
gi|431710589|gb|ELJ74963.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE82]
gi|431711867|gb|ELJ76174.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE85]
gi|431721844|gb|ELJ85836.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE90]
gi|431725794|gb|ELJ89633.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE94]
gi|431726375|gb|ELJ90185.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE95]
gi|431733144|gb|ELJ96585.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE97]
gi|431736023|gb|ELJ99365.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE99]
gi|432347010|gb|ELL41474.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
J96]
gi|441609775|emb|CCP94814.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O10:K5(L):H4 str. ATCC 23506]
gi|441655106|emb|CCQ00169.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O5:K4(L):H4 str. ATCC 23502]
gi|441712014|emb|CCQ07479.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli Nissle 1917]
gi|443420974|gb|AGC85878.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
APEC O78]
gi|444542454|gb|ELV21812.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0814]
gi|444550932|gb|ELV28950.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 09BKT078844]
gi|444551799|gb|ELV29675.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0815]
gi|444565050|gb|ELV41951.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0839]
gi|444567161|gb|ELV43931.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0816]
gi|444571480|gb|ELV47962.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0848]
gi|444582365|gb|ELV58159.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1753]
gi|444585182|gb|ELV60762.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1775]
gi|444586124|gb|ELV61645.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1793]
gi|444600004|gb|ELV74860.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli ATCC 700728]
gi|444600470|gb|ELV75306.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA11]
gi|444608387|gb|ELV82920.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1805]
gi|444614924|gb|ELV89149.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA13]
gi|444615590|gb|ELV89794.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA19]
gi|444623579|gb|ELV97499.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA2]
gi|444632671|gb|ELW06226.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA48]
gi|444632892|gb|ELW06441.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA47]
gi|444637805|gb|ELW11170.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA8]
gi|444647985|gb|ELW20941.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 7.1982]
gi|444650091|gb|ELW22943.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1781]
gi|444654181|gb|ELW26875.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1762]
gi|444663162|gb|ELW35407.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA35]
gi|444667435|gb|ELW39473.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.4880]
gi|444672858|gb|ELW44544.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.0083]
gi|444674581|gb|ELW46111.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0670]
gi|449322677|gb|EMD12660.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O08]
gi|449324925|gb|EMD14845.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli SEPT362]
gi|449324968|gb|EMD14887.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli S17]
Length = 424
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 258/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S R + S IGFGA V+A +D LL V+ DL+ +GLIPEFIGR P++
Sbjct: 259 SHRVETGSGIGFGATVKAK------SDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY+ +F++ V L F D+AL IAKKAMA+ TGARGL
Sbjct: 313 TLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P + V V++D+ + P
Sbjct: 373 RSIVEAALLDTMYDLPSME----DVEKVVIDESVIDGQSKP 409
>gi|410446737|ref|ZP_11300840.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [SAR86 cluster
bacterium SAR86E]
gi|409980409|gb|EKO37160.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [SAR86 cluster
bacterium SAR86E]
Length = 415
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 192/401 (47%), Positives = 259/401 (64%), Gaps = 59/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
+LP+P EI LD++VIGQE+AKK+ AVYNHYKR+
Sbjct: 58 ELPSPLEIFNQLDDYVIGQEKAKKT---------------LSVAVYNHYKRL-------- 94
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N + D+I EL+KSNVLL+GPTGSGKTLLA+TLAR++NVP
Sbjct: 95 -------------------RSNAKKDDI-ELQKSNVLLLGPTGSGKTLLAQTLARVLNVP 134
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
FTI DAT LT+AGYVGED E+++ KLL D+D + A GIVYIDE+DKI K+++ +
Sbjct: 135 FTIADATTLTEAGYVGEDVENIIQKLLQKCDYDADKAALGIVYIDEIDKIARKSDNPSIT 194
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGTV + IP G RKHP+ + I IDT +ILFICGGAF G+++
Sbjct: 195 RDVSGEGVQQALLKLIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFSGIDEV 252
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R S IGFGA V+ T + ++E+++ DLV +GLIPEF+GR P++
Sbjct: 253 IKHRTDKSGIGFGASVKDTQST--------SQKIIETLEPEDLVKFGLIPEFVGRLPVIS 304
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+E LV++L EPKNAL QYK +F++++V+L F +AL IAKKA+ + TGARGL
Sbjct: 305 TLHELDESALVRILQEPKNALVNQYKYLFNIDDVELDFRTEALVEIAKKALQRKTGARGL 364
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E +L + MFE+P + V+VD+ AV P
Sbjct: 365 RSIMEELLMDTMFELPNV-----DLEKVIVDENAVLHATDP 400
>gi|372276433|ref|ZP_09512469.1| ATP-dependent protease ATP-binding subunit ClpX [Pantoea sp.
SL1_M5]
Length = 423
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 194/404 (48%), Positives = 258/404 (63%), Gaps = 57/404 (14%)
Query: 69 NIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQ 128
I LPTP EI LD++VIGQERAKK AVYNHYKR+
Sbjct: 61 RIALPTPHEIRHHLDDYVIGQERAKKV---------------LAVAVYNHYKRLR----- 100
Query: 129 KELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVN 188
N + +EL KSN+LL+GPTGSGKTLLA+TLAR+++
Sbjct: 101 -----------------------NGDTSNGIELGKSNILLIGPTGSGKTLLAETLARLLD 137
Query: 189 VPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRN 247
VPFT+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ +
Sbjct: 138 VPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPS 197
Query: 248 NGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLE 307
RDVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+
Sbjct: 198 ITRDVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLD 255
Query: 308 KTISERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFP 366
K I++R + S IGFGA V+ G + LL + DL+ +GLIPEFIGR P
Sbjct: 256 KVIAQRVETGSGIGFGATVK------GKSQKASEGELLAQCEPEDLIKFGLIPEFIGRLP 309
Query: 367 ILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGA 426
++ +LS L+E+ L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKKAM++ TGA
Sbjct: 310 VVATLSELSEEALIQILREPKNALTKQYQALFNLEGVELEFRDEALTAIAKKAMSRKTGA 369
Query: 427 RGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RGLR+++E L E M+++P V V++D+ + P
Sbjct: 370 RGLRSIVEGALLETMYDLP----SMDDVEKVVIDESVIEGQSEP 409
>gi|218549894|ref|YP_002383685.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia
fergusonii ATCC 35469]
gi|422804517|ref|ZP_16852949.1| ATP-dependent Clp protease [Escherichia fergusonii B253]
gi|424817251|ref|ZP_18242402.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia
fergusonii ECD227]
gi|226706591|sp|B7LME1.1|CLPX_ESCF3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|218357435|emb|CAQ90074.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia fergusonii ATCC 35469]
gi|324114665|gb|EGC08633.1| ATP-dependent Clp protease [Escherichia fergusonii B253]
gi|325498271|gb|EGC96130.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia
fergusonii ECD227]
Length = 424
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 258/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S R + S IGFGA V+A +D LL V+ DL+ +GLIPEFIGR P++
Sbjct: 259 SHRVETGSGIGFGATVKAK------SDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY+ +F++ V L F D+AL IAKKAMA+ TGARGL
Sbjct: 313 TLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P + V V++D+ + P
Sbjct: 373 RSIVEAALLDTMYDLPSME----DVEKVVIDESVIEGQSKP 409
>gi|88705173|ref|ZP_01102885.1| ATP-dependent Clp protease ATP-binding subunit clpX [Congregibacter
litoralis KT71]
gi|88700868|gb|EAQ97975.1| ATP-dependent Clp protease ATP-binding subunit clpX [Congregibacter
litoralis KT71]
Length = 375
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 194/394 (49%), Positives = 254/394 (64%), Gaps = 55/394 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LDE+VIGQ+RAKK AVYNHYKR+ H
Sbjct: 13 LPVPVEINAILDEYVIGQQRAKKV---------------LSVAVYNHYKRLRHG------ 51
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G KS + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 52 -------------GSKSDD--------VELGKSNILLVGPTGSGKTLLAETLARLLDVPF 90
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 91 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQVGIVYIDEIDKISRKSDNPSITR 150
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 151 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSSILFICGGAFAGLDKVI 208
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + IGFGA V + T + + L ++ DLV YGLIPEF+GR P++ +
Sbjct: 209 RDRSEKGGIGFGAEVHSKDATRNVGEVLF------DLEPEDLVQYGLIPEFVGRLPVIAT 262
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ LVQ+L EPKN+L +QY K+F M +V++ F +D LR +A+KAM + TGARGLR
Sbjct: 263 LEELDVPALVQILTEPKNSLTKQYSKLFEMEDVEIDFREDGLRAVAEKAMERKTGARGLR 322
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
++LE +L + M+ IP + V V+VD+ +
Sbjct: 323 SILEGVLLDTMYSIPSRE----DVAKVVVDESVI 352
>gi|398805270|ref|ZP_10564249.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Polaromonas
sp. CF318]
gi|398092051|gb|EJL82473.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Polaromonas
sp. CF318]
Length = 421
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 193/405 (47%), Positives = 262/405 (64%), Gaps = 55/405 (13%)
Query: 67 EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSS 126
E DLPTP EI LD +VIGQE AK++ AVYNHYKR+ H
Sbjct: 60 ETRTDLPTPLEIKGTLDGYVIGQEPAKRT---------------LAVAVYNHYKRLRHKE 104
Query: 127 LQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARI 186
K+ + VEL KSN+LL+GPTGSGKTLLA+TLAR
Sbjct: 105 KAKK--------------------------DDVELTKSNILLIGPTGSGKTLLAQTLART 138
Query: 187 VNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAES 245
+NVPF + DAT LT+AGYVGED E+++ KLL + +++VE AQ+GIVYIDE+DKI K+++
Sbjct: 139 LNVPFVMADATTLTEAGYVGEDVENIIQKLLQSCNYEVERAQQGIVYIDEIDKISRKSDN 198
Query: 246 RNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVG 305
+ RDVSGEGVQQALLK++EGT+ +VP P G RKHP D + +DT +ILFICGGAF G
Sbjct: 199 PSITRDVSGEGVQQALLKLIEGTMASVP-PQGG-RKHPNQDFLQVDTTNILFICGGAFAG 256
Query: 306 LEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRF 365
LEK I R + S +GFGA V++ ++ LT+A + V+ DL+ +GLIPE +GR
Sbjct: 257 LEKVIENRTEASGMGFGATVKSK-KSRTLTEA------FKEVEPEDLIKFGLIPELVGRM 309
Query: 366 PILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTG 425
P++ +L+ L+ED LVQ+L EPKNA+ +Q+ K+ +M V L AL+ IA+KA+A+ TG
Sbjct: 310 PVVATLAELSEDALVQILTEPKNAVVKQFSKLLAMEGVDLEIRPSALKAIARKALARKTG 369
Query: 426 ARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
ARGLR++LE L + MF++P S+V+ V+VD+ + AP
Sbjct: 370 ARGLRSILEQSLIDTMFDLP----NASNVDKVVVDESTIEENKAP 410
>gi|365835460|ref|ZP_09376879.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Hafnia alvei
ATCC 51873]
gi|364566035|gb|EHM43739.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Hafnia alvei
ATCC 51873]
Length = 423
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 196/406 (48%), Positives = 261/406 (64%), Gaps = 62/406 (15%)
Query: 61 NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK 120
+R RN+ LPTP EI LD++VIGQE+AKK AVYNHYK
Sbjct: 58 HRERNA-----LPTPHEIRNHLDDYVIGQEQAKKV---------------LAVAVYNHYK 97
Query: 121 RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA 180
R+ N + VEL KSN+LL+GPTGSGKTLLA
Sbjct: 98 RLR----------------------------NGDTSNGVELGKSNILLIGPTGSGKTLLA 129
Query: 181 KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI 240
+TLAR ++VPFT+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI
Sbjct: 130 ETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKI 189
Query: 241 V-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
K+++ + RDVSGEGVQQALLK++EGT+ VP P G RKHP+ + + +DT ILFIC
Sbjct: 190 SRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVP-PQGG-RKHPQQEFLQVDTSKILFIC 247
Query: 300 GGAFVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLI 358
GGAF GL+K I +R + IGFGA V+A L++ LL + DL+ +GLI
Sbjct: 248 GGAFAGLDKVIGQRVNTGTGIGFGATVKA------LSEKATEGELLAQAEPEDLIKFGLI 301
Query: 359 PEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKK 418
PEFIGR P++ +L L+ED L+Q+L EPKNAL +QY+ +F++ V L F D+AL IAKK
Sbjct: 302 PEFIGRLPVVATLRELSEDALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALTAIAKK 361
Query: 419 AMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
AMA+ TGARGLR+++E L E M+++P + +V+ V+VD+ +
Sbjct: 362 AMARKTGARGLRSIVEAALLETMYDLPSME----NVDKVVVDENVI 403
>gi|332528100|ref|ZP_08404131.1| ATP-dependent protease ATP-binding subunit ClpX [Rubrivivax
benzoatilyticus JA2]
gi|332112671|gb|EGJ12464.1| ATP-dependent protease ATP-binding subunit ClpX [Rubrivivax
benzoatilyticus JA2]
Length = 423
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 192/376 (51%), Positives = 248/376 (65%), Gaps = 51/376 (13%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLP P EI LD++VIGQ+ AK++ AVYNHYKR+ H
Sbjct: 65 DLPVPSEIKTSLDQYVIGQDVAKRT---------------LSVAVYNHYKRLKH------ 103
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
+G+G K DE VEL KSN+LL+GPTGSGKTLLA+TLA+++NVP
Sbjct: 104 -----------MGAGGK--------DE-VELTKSNILLIGPTGSGKTLLAQTLAKLLNVP 143
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT LT+AGYVGED E+++ KLL ++DVE AQRGIVYIDE+DKI KA++ +
Sbjct: 144 FVIADATTLTEAGYVGEDVENIIQKLLQNCNYDVERAQRGIVYIDEIDKISRKADNPSIT 203
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK++EGT+ +VP P G RKHP D + IDT +ILFICGGAF GLEK
Sbjct: 204 RDVSGEGVQQALLKLVEGTMASVP-PQGG-RKHPNQDFLQIDTTNILFICGGAFDGLEKV 261
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R + S IGFGA V + S L V+ DL+ +GLIPE +GR P++
Sbjct: 262 IQGRTEKSGIGFGATVHSKSEKR-------VSDLFREVEPEDLIKFGLIPELVGRLPVVA 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L ED +VQ+L EPKNAL +QY+K+F M+ V+L AL IA+KA+A+ TGARGL
Sbjct: 315 TLGELTEDAMVQILTEPKNALVKQYQKLFGMDGVELEIRPSALSAIARKALARKTGARGL 374
Query: 430 RALLENILTEAMFEIP 445
R+++E+ L + MF++P
Sbjct: 375 RSIMEHALIDTMFDLP 390
>gi|354567675|ref|ZP_08986843.1| ATP-dependent Clp protease ATP-binding subunit clpX [Fischerella
sp. JSC-11]
gi|353542133|gb|EHC11597.1| ATP-dependent Clp protease ATP-binding subunit clpX [Fischerella
sp. JSC-11]
Length = 446
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 195/416 (46%), Positives = 264/416 (63%), Gaps = 46/416 (11%)
Query: 55 SETENGNRNRNSEGNID-LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACC 113
SE R R++ + + +P P+EI K LDE VIGQ+ AKK + +
Sbjct: 61 SEAPQKRRARSTSLSFNQIPKPREIKKYLDEHVIGQDEAKK--VLSV------------- 105
Query: 114 AVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTG 173
AVYNHYKR+ +I+ S N D+ VEL+KSN+LL+GPTG
Sbjct: 106 AVYNHYKRL-----------------AIVQS---KNNGKGATDDAVELQKSNILLIGPTG 145
Query: 174 SGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVY 233
GKTLLA+TLA+I++VPF + DAT LT+AGYVGED E++L +LL AD DVE AQRGI+Y
Sbjct: 146 CGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGIIY 205
Query: 234 IDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDT 292
IDE+DKI K+E+ + RDVSGEGVQQALLKMLEGTV NVP P G RKHP D I IDT
Sbjct: 206 IDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVP-PQGG-RKHPYQDCIQIDT 263
Query: 293 KDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDL 352
+ILFICGGAFVGLEK + +R SIGF P + D L ++ DL
Sbjct: 264 SNILFICGGAFVGLEKVVEQRTGKKSIGFVQPGEGQTKEKRAADT------LRHLEPDDL 317
Query: 353 VAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDAL 412
V +G+IPEFIGR P++ + L+E+ L+ +L +P++AL +QY+K+ M+NV+L F +AL
Sbjct: 318 VKFGMIPEFIGRVPMVAVVDPLDEEALMAILTQPRSALVKQYQKLLKMDNVQLEFKPEAL 377
Query: 413 RLIAKKAMAKNTGARGLRALLENILTEAMFEIPETK-IGTSSVNAVLVDKEAVGSV 467
R IA++A + TGAR LR ++E ++ E M+E+P K + +V +V+K + +
Sbjct: 378 RAIAQEAYRRKTGARALRGIVEELMLEVMYELPSRKDVSRCTVTREMVEKRSTAEL 433
>gi|378578413|ref|ZP_09827088.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Pantoea stewartii subsp. stewartii DC283]
gi|377818693|gb|EHU01774.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Pantoea stewartii subsp. stewartii DC283]
Length = 423
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 193/401 (48%), Positives = 258/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQERAKK AVYNHYKR+
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + +EL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDTSNGIELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S+R + S IGFGA V+ G + LL + DL+ +GLIPEFIGR P++
Sbjct: 259 SQRVETGSGIGFGATVK------GKSQKATEGELLAQCEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKKAM++ TGARGL
Sbjct: 313 TLNELSEEALIQILREPKNALTKQYQALFNLEGVELEFRDEALTAIAKKAMSRKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L E M+++P + V V++D+ + P
Sbjct: 373 RSIVEGALLETMYDLPSME----DVEKVVIDESVIEGQSEP 409
>gi|299535609|ref|ZP_07048930.1| ATP-dependent protease ATP-binding subunit ClpX [Lysinibacillus
fusiformis ZC1]
gi|424739023|ref|ZP_18167448.1| ATP-dependent protease ATP-binding subunit ClpX [Lysinibacillus
fusiformis ZB2]
gi|298728809|gb|EFI69363.1| ATP-dependent protease ATP-binding subunit ClpX [Lysinibacillus
fusiformis ZC1]
gi|422947111|gb|EKU41511.1| ATP-dependent protease ATP-binding subunit ClpX [Lysinibacillus
fusiformis ZB2]
Length = 423
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 191/377 (50%), Positives = 251/377 (66%), Gaps = 56/377 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI LDE+VIGQERAKK+ AVYNHYKRI
Sbjct: 60 DIPKPKEILTILDEYVIGQERAKKA---------------LAVAVYNHYKRI-------- 96
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N N + D+I EL KSN++L+GPTGSGKTLLA+TLARI+NVP
Sbjct: 97 -------------------NTNSKIDDI-ELAKSNIVLIGPTGSGKTLLAQTLARILNVP 136
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ +AD+D+E A++GI+YIDE+DK+ K+E+ +
Sbjct: 137 FAIADATSLTEAGYVGEDVENILLKLIQSADYDIERAEKGIIYIDEIDKVARKSENPSIT 196
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + + IDT +ILFI GGAF G+E
Sbjct: 197 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFLQIDTTNILFIVGGAFDGIETI 254
Query: 310 ISERRQDSSIGFGA-PVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I R+ + IGFG+ P ++ G + L+ DL+ +GLIPEFIGR P+L
Sbjct: 255 IKRRQGEKVIGFGSDPNIVDVDEGSIMSKLIPE---------DLLKFGLIPEFIGRLPVL 305
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
SL LNE LVQ+L EPKNAL +QY+KM ++ V+L F +DAL IAK+A+ + TGARG
Sbjct: 306 ASLEQLNEAALVQILTEPKNALAKQYQKMLELDGVELEFDEDALVAIAKEAIERKTGARG 365
Query: 429 LRALLENILTEAMFEIP 445
LR+++E+ + + M+E+P
Sbjct: 366 LRSIIESTMLDVMYELP 382
>gi|67923460|ref|ZP_00516937.1| ClpX, ATPase regulatory subunit [Crocosphaera watsonii WH 8501]
gi|67854695|gb|EAM49977.1| ClpX, ATPase regulatory subunit [Crocosphaera watsonii WH 8501]
Length = 444
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 194/416 (46%), Positives = 265/416 (63%), Gaps = 51/416 (12%)
Query: 35 EEIMGGFIRKDGESN-GIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAK 93
EE+MG GE N ++S+T +N +LP P EI LDE+VIGQ+ AK
Sbjct: 45 EELMG----TSGEMNPSNPADSQTPKRRAAKNGGSLKELPKPMEIKDYLDEYVIGQDEAK 100
Query: 94 KSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNV 153
K AVYNHYKR+ + G
Sbjct: 101 KV---------------LSVAVYNHYKRL----------------------SLVQGKKGE 123
Query: 154 ENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVL 213
++ + +EL+KSN+LLMGPTGSGKTLLA+TLA+I+ VPF + DAT LT+AGYVGED E++L
Sbjct: 124 QDQDNIELQKSNILLMGPTGSGKTLLAQTLAQILEVPFAVADATTLTEAGYVGEDVENIL 183
Query: 214 YKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNV 272
+LL AD DVE AQRGI+YIDE+DKI K+E+ + RDVSGEGVQQALLKMLEGTV NV
Sbjct: 184 LRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANV 243
Query: 273 PIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTG 332
P P G RKHP D I IDT +ILFICGGAFVGL++ I +R S+GF P
Sbjct: 244 P-PQGG-RKHPYQDCIQIDTSNILFICGGAFVGLDRVIEQRIGKKSMGFVRPGE------ 295
Query: 333 GLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGR 392
G + T+ L++ V+ DLV +G+IPEF+GR P++ +L+ L E+ L+ +L +P+NAL +
Sbjct: 296 GQSKEERTADLMQRVEPDDLVKFGMIPEFVGRIPVMAALNPLTEETLIAILTKPRNALVK 355
Query: 393 QYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETK 448
QY+K+ +M+NV+L F+ +A++ IA++A + TGAR LR ++E ++ + M+E+P K
Sbjct: 356 QYQKLLNMDNVELEFSPEAVKAIAQEAYRRKTGARALRGIVEELMLDVMYELPSRK 411
>gi|395232658|ref|ZP_10410908.1| ATP-dependent protease ATP-binding subunit ClpX [Enterobacter sp.
Ag1]
gi|394733060|gb|EJF32699.1| ATP-dependent protease ATP-binding subunit ClpX [Enterobacter sp.
Ag1]
Length = 424
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 258/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+ +S
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKV---------------LAVAVYNHYKRLRNS------ 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 103 ----------------------DTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ R + S IGFGA V+A ++ LL V+ DL+ +GLIPEFIGR P++
Sbjct: 259 ANRVETGSGIGFGATVKAK------SEKASEGQLLGQVEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+LS L+ED L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKKAM + TGARGL
Sbjct: 313 TLSELSEDALIQILKEPKNALTKQYQALFNLEGVELEFRDEALDAIAKKAMIRKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L + M+++P V V++D+ + P
Sbjct: 373 RSIVEGALLDTMYDLP----SLDDVEKVVIDESVIAGQSKP 409
>gi|341584247|ref|YP_004764738.1| ATP-dependent protease ATP-binding subunit ClpX [Rickettsia
heilongjiangensis 054]
gi|340808472|gb|AEK75060.1| ATP-dependent protease ATP-binding subunit ClpX [Rickettsia
heilongjiangensis 054]
Length = 425
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 188/378 (49%), Positives = 262/378 (69%), Gaps = 52/378 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++IC L+++V+GQ++AKK IL AVYNHYKR+ +
Sbjct: 60 IPTPQKICGILNDYVVGQDQAKK-----IL----------AVAVYNHYKRLEY------- 97
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
V+SGN ND VEL KSN+LL+GPTGSGKTLLA+TLA+I++VPF
Sbjct: 98 --------------VQSGN----ND--VELNKSNILLIGPTGSGKTLLAQTLAKILDVPF 137
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT+LT+AGYVGED E++L +LL AA+F++ AQ+GI+YIDEVDKI K+E+ + R
Sbjct: 138 TMADATSLTEAGYVGEDVENILLRLLIAAEFNIAKAQKGIIYIDEVDKIARKSENPSITR 197
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ D + +DT +ILFICGGAF+G++ I
Sbjct: 198 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQDFVQLDTSNILFICGGAFMGIDSII 255
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+ R +SSIGF A V + S +L+S++ DL +GLIPEFIGR PI+ +
Sbjct: 256 TSRTNNSSIGFAANVNIDKEKNN-------SEILKSLEIEDLTKFGLIPEFIGRLPIVTT 308
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ + L+ +L +PKNA+ +QY+K F +++ +L D AL IA+KA+AK TGARGLR
Sbjct: 309 LDELDTEALITILTKPKNAIVKQYQKQFELDDAELVIDDSALEAIAEKALAKKTGARGLR 368
Query: 431 ALLENILTEAMFEIPETK 448
++LE++L E+M+++ E K
Sbjct: 369 SILEHLLLESMYKVAELK 386
>gi|57238934|ref|YP_180070.1| ATP-dependent protease ATP-binding subunit ClpX [Ehrlichia
ruminantium str. Welgevonden]
gi|58578867|ref|YP_197079.1| ATP-dependent protease ATP-binding subunit ClpX [Ehrlichia
ruminantium str. Welgevonden]
gi|58616925|ref|YP_196124.1| ATP-dependent protease ATP-binding subunit ClpX [Ehrlichia
ruminantium str. Gardel]
gi|75356618|sp|Q5FFG6.1|CLPX_EHRRG RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|81353017|sp|Q5HBX4.1|CLPX_EHRRW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|57161013|emb|CAH57919.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Ehrlichia
ruminantium str. Welgevonden]
gi|58416537|emb|CAI27650.1| ATP-dependent clp protease ATP-binding subunit ClpX [Ehrlichia
ruminantium str. Gardel]
gi|58417493|emb|CAI26697.1| ATP-dependent clp protease ATP-binding subunit ClpX [Ehrlichia
ruminantium str. Welgevonden]
Length = 406
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 199/391 (50%), Positives = 255/391 (65%), Gaps = 59/391 (15%)
Query: 75 PKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSD 134
PKEI K LDE+VIGQE +KK AVYNHYKR+ +S + +SD
Sbjct: 61 PKEIKKVLDEYVIGQEHSKKV---------------LSVAVYNHYKRLSNSGI----ISD 101
Query: 135 HLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTIT 194
VE+ KSNVLL+GPTGSGKTLLA+TLAR++ VPF +
Sbjct: 102 ------------------------VEISKSNVLLIGPTGSGKTLLARTLARVLQVPFAMA 137
Query: 195 DATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVS 253
DAT LT+AGYVGED ES+L KLL AA+F+VEAAQRGI+YIDEVDKI K+E+ + RDVS
Sbjct: 138 DATTLTEAGYVGEDVESILLKLLQAANFNVEAAQRGIIYIDEVDKISRKSENASITRDVS 197
Query: 254 GEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISER 313
GEGVQQALLK++EGTV +VP P G RKHP + I I+T +ILFI GGAF GLEK I R
Sbjct: 198 GEGVQQALLKVIEGTVSSVP-PQGG-RKHPHQEFIQINTDNILFIFGGAFDGLEKIIESR 255
Query: 314 RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSA 373
Q S++GF A V+ + + + DLV +GLIPEF+GR P++ SL
Sbjct: 256 HQGSNMGFEANVQKASK---------DKDIFCYTEPEDLVKFGLIPEFVGRIPVITSLGE 306
Query: 374 LNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALL 433
L+E L ++L+EPKN+L +QYKK+F M+N+ L F D AL IA+KA + GARGLRA+L
Sbjct: 307 LDEATLCRILVEPKNSLVKQYKKLFEMDNINLEFDDSALSEIARKAAVRKAGARGLRAIL 366
Query: 434 ENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
EN+L + MFE P GT +V+ +++ K+ V
Sbjct: 367 ENLLLDLMFETP----GTFNVDQIVISKQMV 393
>gi|323703642|ref|ZP_08115285.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Desulfotomaculum nigrificans DSM 574]
gi|323531414|gb|EGB21310.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Desulfotomaculum nigrificans DSM 574]
Length = 416
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 191/395 (48%), Positives = 257/395 (65%), Gaps = 57/395 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLP PKEI LD++VIGQE AKK AVYNHYKRI
Sbjct: 57 DLPKPKEIKAILDQYVIGQESAKKQ---------------LAVAVYNHYKRIN------- 94
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
LG V E VEL KSN++++GPTGSGKTLLA+TLAR++NVP
Sbjct: 95 -----------LGGKV----------EDVELSKSNIIMLGPTGSGKTLLAQTLARLLNVP 133
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A++GIVYIDE+DKI K+E+ +
Sbjct: 134 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSIT 193
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ +VP P G RKHP + I +DT +ILFICGGAF G+EK
Sbjct: 194 RDVSGEGVQQALLKILEGTIASVP-PQGG-RKHPHQEFIQLDTTNILFICGGAFDGIEKI 251
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R ++GFGA +++ +L + DL+ +GLIPEF+GR P++V
Sbjct: 252 IQNRTGKKTMGFGAEIQSKREQK-------IGEILAQILPEDLLKFGLIPEFVGRLPVIV 304
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+E LV++L EPKNAL +QY+K+F ++ V L DALR +AK+A+ + TGARGL
Sbjct: 305 TLDALDEGALVRILTEPKNALTKQYEKLFELDGVSLEIQPDALREVAKEALKRKTGARGL 364
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
RA++E ++ M++IP ++ V++ ++A+
Sbjct: 365 RAIMEEVMLNIMYDIP----SREDISKVVITRDAI 395
>gi|389877839|ref|YP_006371404.1| ATP-dependent protease ATP-binding subunit [Tistrella mobilis
KA081020-065]
gi|388528623|gb|AFK53820.1| ATP-dependent protease ATP-binding subunit [Tistrella mobilis
KA081020-065]
Length = 422
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 193/393 (49%), Positives = 264/393 (67%), Gaps = 57/393 (14%)
Query: 73 PTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELV 132
PTPK+I LD++VIGQE+AK+ IL AVYNHYKR+
Sbjct: 64 PTPKDIFNVLDDYVIGQEQAKR-----IL----------SVAVYNHYKRLNQG------- 101
Query: 133 SDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFT 192
G G + VEL KSN+LL+GPTG GKTLLA+TLARI++VPFT
Sbjct: 102 ----------GKGAE-----------VELAKSNILLIGPTGCGKTLLAQTLARILDVPFT 140
Query: 193 ITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRD 251
++DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + RD
Sbjct: 141 MSDATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRD 200
Query: 252 VSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTIS 311
VSGEGVQQALLK++EGTV +V P G RKHP+ + + +DT +ILFI GGAFVGL++ I+
Sbjct: 201 VSGEGVQQALLKIMEGTVASV--PPQGGRKHPQQEFLQVDTTNILFIVGGAFVGLDRIIN 258
Query: 312 ERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSL 371
+R + +SIGFGA V + + +L V+ DL+ +GLIPEF+GR P++ +L
Sbjct: 259 DRGRKTSIGFGANVEP-------VETRRSGDVLRQVEPEDLLKFGLIPEFVGRLPVIATL 311
Query: 372 SALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRA 431
L+ D LVQ+L +PKNAL +QY+++F + NV L F+DDAL IA++A+ + TGARGLRA
Sbjct: 312 HDLDRDALVQILTKPKNALLKQYQRLFELENVHLTFSDDALGAIAERAIERKTGARGLRA 371
Query: 432 LLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
++E IL + MF++P+ V ++V++E V
Sbjct: 372 IMEEILLDTMFDLPD----LDGVEEIVVNREVV 400
>gi|317047176|ref|YP_004114824.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pantoea sp.
At-9b]
gi|316948793|gb|ADU68268.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pantoea sp.
At-9b]
Length = 423
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 193/401 (48%), Positives = 259/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP EI LD++VIGQE+AKK AVYNHYKR+
Sbjct: 64 LPTPHEIRHHLDDYVIGQEKAKKV---------------LAVAVYNHYKRLR-------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N + +EL KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 101 --------------------NGDTSNGIELGKSNILLIGPTGSGKTLLAETLARLLDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
S+R + S IGFGA V+ G + LL V+ DL+ +GLIPEFIGR P++
Sbjct: 259 SQRVETGSGIGFGATVK------GKSQKASEGELLSQVEPEDLIKFGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY+ +F++ V+L F D+AL IAKKAM++ TGARGL
Sbjct: 313 TLNELSEEALIQILREPKNALTKQYQALFNLEGVELEFRDEALTAIAKKAMSRKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E L E M+++P + V V++D+ + P
Sbjct: 373 RSIVEAALLETMYDLPSME----DVEKVVIDESVIEGQSEP 409
>gi|416405033|ref|ZP_11687844.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Crocosphaera
watsonii WH 0003]
gi|357261368|gb|EHJ10639.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Crocosphaera
watsonii WH 0003]
Length = 397
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 191/397 (48%), Positives = 259/397 (65%), Gaps = 46/397 (11%)
Query: 53 SESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGAC 112
++S+T +N +LP P EI LDE+VIGQ+ AKK
Sbjct: 13 ADSQTPKRRAAKNGGSLKELPKPMEIKDYLDEYVIGQDEAKKV---------------LS 57
Query: 113 CAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPT 172
AVYNHYKR+ LV K G + +N +EL+KSN+LLMGPT
Sbjct: 58 VAVYNHYKRL-------SLVQG------------KKGEQDQDN---IELQKSNILLMGPT 95
Query: 173 GSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIV 232
GSGKTLLA+TLA+I+ VPF + DAT LT+AGYVGED E++L +LL AD DVE AQRGI+
Sbjct: 96 GSGKTLLAQTLAQILEVPFAVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGII 155
Query: 233 YIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPID 291
YIDE+DKI K+E+ + RDVSGEGVQQALLKMLEGTV NVP P G RKHP D I ID
Sbjct: 156 YIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVP-PQGG-RKHPYQDCIQID 213
Query: 292 TKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGD 351
T +ILFICGGAFVGL++ I +R S+GF P G + T+ L++ V+ D
Sbjct: 214 TSNILFICGGAFVGLDRVIEQRIGKKSMGFVRPGE------GQSKEERTADLMQRVEPDD 267
Query: 352 LVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDA 411
LV +G+IPEF+GR P++ +L+ L E+ L+ +L +P+NAL +QY+K+ +M+NV+L F+ +A
Sbjct: 268 LVKFGMIPEFVGRIPVMAALNPLTEETLIAILTKPRNALVKQYQKLLNMDNVELEFSPEA 327
Query: 412 LRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETK 448
++ IA++A + TGAR LR ++E ++ + M+E+P K
Sbjct: 328 VKAIAQEAYRRKTGARALRGIVEELMLDVMYELPSRK 364
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.136 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,856,754,436
Number of Sequences: 23463169
Number of extensions: 342590298
Number of successful extensions: 1511117
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6727
Number of HSP's successfully gapped in prelim test: 16884
Number of HSP's that attempted gapping in prelim test: 1463940
Number of HSP's gapped (non-prelim): 38497
length of query: 510
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 363
effective length of database: 8,910,109,524
effective search space: 3234369757212
effective search space used: 3234369757212
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 79 (35.0 bits)