BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038067
(510 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O67356|CLPX_AQUAE ATP-dependent Clp protease ATP-binding subunit ClpX OS=Aquifex
aeolicus (strain VF5) GN=clpX PE=3 SV=1
Length = 412
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/415 (51%), Positives = 274/415 (66%), Gaps = 58/415 (13%)
Query: 58 ENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYN 117
EN + N E D+P P++I K LDE+VIGQERAKK IL AVYN
Sbjct: 46 ENKKTSYNFELK-DIPKPEQIKKILDEYVIGQERAKK-----IL----------SVAVYN 89
Query: 118 HYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKT 177
HYKRI K+ + D+ VELEKSN+LL+GPTGSGKT
Sbjct: 90 HYKRI------------------------KAKEAGLSLDD-VELEKSNILLIGPTGSGKT 124
Query: 178 LLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEV 237
LLA+TLA+I+NVPF I DAT+LT+AGYVGED E+VL +LL A D+DV+AAQ+GIVYIDE+
Sbjct: 125 LLARTLAKILNVPFAIADATSLTEAGYVGEDVENVLVRLLQACDYDVKAAQKGIVYIDEI 184
Query: 238 DKIVKAESRNNG--RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDI 295
DKI K N RDVSGEGVQQALLK++EG+VVNVP P G RKHP + I +DT DI
Sbjct: 185 DKIAKKSGINPSITRDVSGEGVQQALLKIVEGSVVNVP-PQGG-RKHPHQEFIQVDTTDI 242
Query: 296 LFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAY 355
LFICGGAFVGLE I +R S +GF A ++ + LLE V+ DL+ +
Sbjct: 243 LFICGGAFVGLEDIIKQRLGKSRVGFEAEIKKVDK---------EQDLLELVEPDDLIRF 293
Query: 356 GLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLI 415
G+IPEFIGRFP++ +L L ED+LV++L+EPKNAL +QY+K+F + VKL FT+ ALR I
Sbjct: 294 GMIPEFIGRFPVIATLRELTEDELVRILVEPKNALVKQYQKLFELEGVKLTFTEKALREI 353
Query: 416 AKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
AK+A+ + TGARGLRA++E+I+ + MFE+P V V++D+ V + + P
Sbjct: 354 AKEAIRRKTGARGLRAIMEDIMADIMFEVP----SLPGVKEVIIDENVVKNKEKP 404
>sp|Q6FEP7|CLPX_ACIAD ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Acinetobacter sp. (strain ADP1) GN=clpX PE=3 SV=1
Length = 436
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/395 (50%), Positives = 259/395 (65%), Gaps = 49/395 (12%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLP P EI LD++VIGQ+ AKK+ AVYNHYKR+
Sbjct: 59 DLPKPHEIRAALDQYVIGQDLAKKT---------------LSVAVYNHYKRL-------- 95
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
K+G + VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VP
Sbjct: 96 ----------------KAGQSGHVSKHEVEIAKSNILLIGPTGSGKTLLAQTLARLLDVP 139
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F + DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ +
Sbjct: 140 FAMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSIT 199
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK
Sbjct: 200 RDVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKI 257
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+ +R + IGF A V+ T L + L V+ DLV +GLIPEFIGR P++
Sbjct: 258 VQQRHEKGGIGFNAEVKKKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIA 311
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L+E L+Q+L EPKNAL RQY+ +F M NV L F + ALR IAKKA+ +NTGARGL
Sbjct: 312 TLEELDEAALMQILTEPKNALTRQYQSLFQMENVDLVFEESALRAIAKKALERNTGARGL 371
Query: 430 RALLENILTEAMFEIPETK-IGTSSVNAVLVDKEA 463
R+++EN+L E M+++P K IGT VN ++ EA
Sbjct: 372 RSIMENVLLETMYDLPSRKDIGTVVVNEAVIRGEA 406
>sp|B0V4T7|CLPX_ACIBY ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Acinetobacter baumannii (strain AYE) GN=clpX PE=3
SV=1
Length = 437
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/394 (50%), Positives = 263/394 (66%), Gaps = 50/394 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+ K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKT---------------LSVAVYNHYKRL------KVG 98
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
S H+ D VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 99 QSGHVSKD-------------------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 140 AMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK +
Sbjct: 200 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIV 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ T L + L V+ DLV +GLIPEFIGR P++ +
Sbjct: 258 QQRQEKGGIGFTADVKNKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F+M NV L F D ALR +AK+A+ +NTGARGLR
Sbjct: 312 LEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLR 371
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
++LEN+L E M+++P T +GT +N +++ EA
Sbjct: 372 SILENVLLETMYDLPSRTDVGTVFINEAVINGEA 405
>sp|A3M1Y8|CLPX_ACIBT ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC
755) GN=clpX PE=3 SV=2
Length = 437
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/394 (50%), Positives = 263/394 (66%), Gaps = 50/394 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+ K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKT---------------LSVAVYNHYKRL------KVG 98
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
S H+ D VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 99 QSGHVSKD-------------------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 140 AMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK +
Sbjct: 200 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIV 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ T L + L V+ DLV +GLIPEFIGR P++ +
Sbjct: 258 QQRQEKGGIGFTADVKNKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F+M NV L F D ALR +AK+A+ +NTGARGLR
Sbjct: 312 LEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLR 371
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
++LEN+L E M+++P T +GT +N +++ EA
Sbjct: 372 SILENVLLETMYDLPSRTDVGTVFINEAVINGEA 405
>sp|B0VKU4|CLPX_ACIBS ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Acinetobacter baumannii (strain SDF) GN=clpX PE=3
SV=1
Length = 437
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/394 (50%), Positives = 263/394 (66%), Gaps = 50/394 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+ K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKT---------------LSVAVYNHYKRL------KVG 98
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
S H+ D VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 99 QSGHVSKD-------------------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 140 AMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK +
Sbjct: 200 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIV 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ T L + L V+ DLV +GLIPEFIGR P++ +
Sbjct: 258 QQRQEKGGIGFTADVKNKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F+M NV L F D ALR +AK+A+ +NTGARGLR
Sbjct: 312 LEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLR 371
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
++LEN+L E M+++P T +GT +N +++ EA
Sbjct: 372 SILENVLLETMYDLPSRTDVGTVFINEAVINGEA 405
>sp|B2I3C2|CLPX_ACIBC ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Acinetobacter baumannii (strain ACICU) GN=clpX PE=3
SV=1
Length = 437
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/394 (50%), Positives = 263/394 (66%), Gaps = 50/394 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+ K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKT---------------LSVAVYNHYKRL------KVG 98
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
S H+ D VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 99 QSGHVSKD-------------------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 140 AMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK +
Sbjct: 200 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIV 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ T L + L V+ DLV +GLIPEFIGR P++ +
Sbjct: 258 QQRQEKGGIGFTADVKNKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F+M NV L F D ALR +AK+A+ +NTGARGLR
Sbjct: 312 LEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLR 371
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
++LEN+L E M+++P T +GT +N +++ EA
Sbjct: 372 SILENVLLETMYDLPSRTDVGTVFINEAVINGEA 405
>sp|B7I5E4|CLPX_ACIB5 ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Acinetobacter baumannii (strain AB0057) GN=clpX PE=3
SV=1
Length = 437
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/394 (50%), Positives = 263/394 (66%), Gaps = 50/394 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+ K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKT---------------LSVAVYNHYKRL------KVG 98
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
S H+ D VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 99 QSGHVSKD-------------------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 140 AMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK +
Sbjct: 200 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIV 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ T L + L V+ DLV +GLIPEFIGR P++ +
Sbjct: 258 QQRQEKGGIGFTADVKNKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F+M NV L F D ALR +AK+A+ +NTGARGLR
Sbjct: 312 LEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLR 371
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
++LEN+L E M+++P T +GT +N +++ EA
Sbjct: 372 SILENVLLETMYDLPSRTDVGTVFINEAVINGEA 405
>sp|B7H092|CLPX_ACIB3 ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Acinetobacter baumannii (strain AB307-0294) GN=clpX
PE=3 SV=1
Length = 437
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/394 (50%), Positives = 263/394 (66%), Gaps = 50/394 (12%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKR+ K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKT---------------LSVAVYNHYKRL------KVG 98
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
S H+ D VE+ KSN+LL+GPTGSGKTLLA+TLAR+++VPF
Sbjct: 99 QSGHVSKD-------------------VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL AD+DVE AQ+GI+YIDE+DKI K+E+ + R
Sbjct: 140 AMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLKM+EGTV + IP G RKHP+ + I IDT +ILFICGGAF GLEK +
Sbjct: 200 DVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIV 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R++ IGF A V+ T L + L V+ DLV +GLIPEFIGR P++ +
Sbjct: 258 QQRQEKGGIGFTADVKNKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+Q+L EPKNAL RQY+ +F+M NV L F D ALR +AK+A+ +NTGARGLR
Sbjct: 312 LEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLR 371
Query: 431 ALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 463
++LEN+L E M+++P T +GT +N +++ EA
Sbjct: 372 SILENVLLETMYDLPSRTDVGTVFINEAVINGEA 405
>sp|A6U7U8|CLPX_SINMW ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Sinorhizobium medicae (strain WSM419) GN=clpX PE=3
SV=1
Length = 425
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/402 (50%), Positives = 273/402 (67%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI K LDE+VIGQ++AK+ IL AV+NHYKR+ H++
Sbjct: 66 VPTPQEIIKVLDEYVIGQQQAKR-----IL----------SVAVHNHYKRLAHAA----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KS + VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KSSD--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGFGA VRA + R G +L ++ DLV +GLIPEFIGR P+L
Sbjct: 261 SARGEKTSIGFGATVRAPEDRRVG---------EVLRELEPEDLVKFGLIPEFIGRLPVL 311
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+ED L+Q+L EPKNAL +QY+++F M +V+L+F +DALR IA++A+ + TGARG
Sbjct: 312 ATLEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELNFHEDALREIARRAIVRKTGARG 371
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E IL + MFE+P + V V++ +E V P
Sbjct: 372 LRSIMEKILLDTMFELPTLE----GVREVVISEEVVKGTARP 409
>sp|Q92QQ2|CLPX_RHIME ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhizobium
meliloti (strain 1021) GN=clpX PE=3 SV=1
Length = 425
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/402 (50%), Positives = 272/402 (67%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI K LDE+VIGQ++AK+ IL AV+NHYKR+ H++
Sbjct: 66 VPTPQEIIKVLDEYVIGQQQAKR-----IL----------SVAVHNHYKRLAHAA----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KS + VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KSSD--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGFGA VRA + R G +L ++ DLV +GLIPEFIGR P+L
Sbjct: 261 SARGEKTSIGFGATVRAPEDRRVG---------EVLRELEPEDLVKFGLIPEFIGRLPVL 311
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+ED L+Q+L EPKNAL +QY+++F M +V+L+F +DALR IA++A+ + TGARG
Sbjct: 312 ATLEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELNFHEDALREIARRAIVRKTGARG 371
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E IL + MFE+P + V V++ E V P
Sbjct: 372 LRSIMEKILLDTMFELPTLE----GVREVVISDEVVKGTARP 409
>sp|Q180E8|CLPX_CLOD6 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Clostridium
difficile (strain 630) GN=clpX PE=3 SV=1
Length = 416
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/408 (49%), Positives = 267/408 (65%), Gaps = 63/408 (15%)
Query: 67 EGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSS 126
E LP PKE+ + L+++VIGQE+AKK+ AVYNHYKRIY
Sbjct: 55 EDTTSLPKPKEMMEILNDYVIGQEKAKKA---------------LSVAVYNHYKRIYSK- 98
Query: 127 LQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARI 186
KS + + +E++KSN+LL+GPTGSGKTLLA+TLAR
Sbjct: 99 --------------------KSSSKD------IEIQKSNILLLGPTGSGKTLLAQTLART 132
Query: 187 VNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAES 245
+NVPF + DAT+LT+AGYVGED E++L KL+ AADFD+E A+RGI+YIDE+DKI K+E+
Sbjct: 133 LNVPFAMADATSLTEAGYVGEDVENILLKLIQAADFDIEKAERGIIYIDEIDKIARKSEN 192
Query: 246 RNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVG 305
+ RDVSGEGVQQALLK+LEGTV NVP P G RKHP + + IDT ++LFI GGAF G
Sbjct: 193 PSITRDVSGEGVQQALLKILEGTVANVP-PQGG-RKHPHQEFLKIDTTNVLFILGGAFDG 250
Query: 306 LEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRF 365
LEK I +R D ++GFGA + + L L E V DL+ YG+IPEFIGR
Sbjct: 251 LEKIIQKRGGDKTLGFGAKIESKKE-------LDLGKLYEKVLPEDLLKYGIIPEFIGRI 303
Query: 366 PILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTG 425
P+L +L L+ED L+Q+L EPKNAL +QYKK+ +++V+L F + ALR IAKKA+ +NTG
Sbjct: 304 PVLATLELLDEDALMQILQEPKNALVKQYKKLLELDDVELEFEEGALRAIAKKAIERNTG 363
Query: 426 ARGLRALLENILTEAMFEIP-----------ETKIGTSSVNAVLVDKE 462
ARGLR+++E+++ E MFE+P E + SVN ++V K+
Sbjct: 364 ARGLRSIVESVMMETMFEVPSRDNIKKVIVTEKSVNEDSVNPIIVLKD 411
>sp|A1U1Q2|CLPX_MARAV ATP-dependent Clp protease ATP-binding subunit ClpX OS=Marinobacter
aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=clpX
PE=3 SV=1
Length = 427
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/414 (48%), Positives = 268/414 (64%), Gaps = 56/414 (13%)
Query: 58 ENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYN 117
E N E + LPTP EI + L+E+VIGQ+RAK + AVYN
Sbjct: 53 EEIQENAPEEASDRLPTPAEIRETLNEYVIGQDRAK---------------VVLSVAVYN 97
Query: 118 HYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKT 177
HYKR+ + E VEL KSN+LL+GPTGSGKT
Sbjct: 98 HYKRLRYG----------------------------EGKSDVELGKSNILLIGPTGSGKT 129
Query: 178 LLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEV 237
LLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+
Sbjct: 130 LLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEI 189
Query: 238 DKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDIL 296
DKI K+++ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +IL
Sbjct: 190 DKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTGNIL 247
Query: 297 FICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYG 356
FICGGAF GL+K I ER + SSIGF A V++ D+ T ++ V++ DLV +G
Sbjct: 248 FICGGAFAGLDKVIQERSERSSIGFSATVKSQ------DDSKSTGDIIREVETEDLVKFG 301
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
LIPEF+GR P++ +L+ L+E+ LVQ+L EPKNAL +QY+K+F M V+L F +DALR +A
Sbjct: 302 LIPEFVGRLPVVATLTELDEEALVQILTEPKNALTKQYQKLFDMEGVELDFREDALRAVA 361
Query: 417 KKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+KAM + TGARGLR+++E L + M++IP V+ V++D+ + P
Sbjct: 362 RKAMERKTGARGLRSIMEATLLDTMYQIP----SEHDVSKVVIDESVIKGDSEP 411
>sp|Q8UFY5|CLPX_AGRT5 ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970)
GN=clpX PE=3 SV=1
Length = 425
Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/400 (50%), Positives = 271/400 (67%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ++AKK IL AV+NHYKR+ H+S
Sbjct: 66 VPTPQDIIKILDEYVIGQKQAKK-----IL----------SVAVHNHYKRLAHAS----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G+ VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KNGD--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+A D +L ++ DLV +GLIPEFIGR P+L +
Sbjct: 261 SARGEKTSIGFGATVKAE-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EPKNAL +QY+++F M +V+L F +DALR IA++A+ + TGARGLR
Sbjct: 314 LEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELTFHEDALREIARRAITRKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
+++E IL + MFE+P + V V++ + V V P
Sbjct: 374 SIMEKILLDTMFELPTLE----GVREVVISNDVVSGVARP 409
>sp|Q67SJ9|CLPX_SYMTH ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Symbiobacterium thermophilum (strain T / IAM 14863)
GN=clpX PE=3 SV=1
Length = 424
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/401 (49%), Positives = 268/401 (66%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P P EI LD++VIGQERAK++ AVYNHYKRI
Sbjct: 61 DVPKPAEIKAILDQYVIGQERAKRT---------------LAVAVYNHYKRIN------- 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
LGS + VEL+KSN+L++GPTGSGKTLLA+TLARI+NVP
Sbjct: 99 -----------LGSKLDD----------VELQKSNILMLGPTGSGKTLLAQTLARILNVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+D+E A+RGIVYIDEVDKI K+E+ +
Sbjct: 138 FAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAERGIVYIDEVDKIARKSENPSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ +VP P G RKHP + I I+T +ILFICGGAF G++K
Sbjct: 198 RDVSGEGVQQALLKILEGTIASVP-PQGG-RKHPHQEFIQINTTNILFICGGAFDGIDKI 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I+ R S +GFGA +R+ LL+ + DL+ +GLIPEFIGR PI+V
Sbjct: 256 IANRVGRSGLGFGADIRSKQEQN-------VGELLKQIMPEDLLKFGLIPEFIGRLPIVV 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+ED LV++L EPKNAL +QY+K+ ++N++L F ++A+R IAK+A+ +NTGARGL
Sbjct: 309 TLDALDEDALVRILREPKNALVKQYQKLLQLDNIELEFEEEAVRAIAKEALRRNTGARGL 368
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA++E+I+T+ M+E+P + V ++ K+ V P
Sbjct: 369 RAIIEDIMTDVMYEVP----SRTDVTKCVITKDVVLKKQEP 405
>sp|Q2K9U6|CLPX_RHIEC ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhizobium
etli (strain CFN 42 / ATCC 51251) GN=clpX PE=3 SV=1
Length = 425
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/394 (51%), Positives = 268/394 (68%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ +AKK IL AV+NHYKR+ H+S
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKK-----IL----------SVAVHNHYKRLAHAS----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KNGE--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+A D +L ++ DLV +GLIPEFIGR P+L +
Sbjct: 261 SARGEKTSIGFGATVKAQ-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EPKNAL +QY+++F M +V+L F +DALR IA+KA+ + TGARGLR
Sbjct: 314 LEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELTFHEDALREIARKAIVRKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E IL + MFE+P + V V++ +E V
Sbjct: 374 SIMEKILLDTMFELPTLE----GVREVVISEEVV 403
>sp|B3PVY5|CLPX_RHIE6 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhizobium
etli (strain CIAT 652) GN=clpX PE=3 SV=1
Length = 425
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/394 (51%), Positives = 268/394 (68%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ +AKK IL AV+NHYKR+ H+S
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKK-----IL----------SVAVHNHYKRLAHAS----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KNGE--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+A D +L ++ DLV +GLIPEFIGR P+L +
Sbjct: 261 SARGEKTSIGFGATVKAQ-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EPKNAL +QY+++F M +V+L F +DALR IA+KA+ + TGARGLR
Sbjct: 314 LEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELTFHEDALREIARKAIVRKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E IL + MFE+P + V V++ +E V
Sbjct: 374 SIMEKILLDTMFELPTLE----GVREVVISEEVV 403
>sp|Q165G0|CLPX_ROSDO ATP-dependent Clp protease ATP-binding subunit ClpX OS=Roseobacter
denitrificans (strain ATCC 33942 / OCh 114) GN=clpX PE=3
SV=1
Length = 421
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/414 (48%), Positives = 274/414 (66%), Gaps = 61/414 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPK+IC LD++VIGQ AK+ AV+NHYKR+ H+
Sbjct: 63 VPTPKDICAVLDDYVIGQAMAKRV---------------LSVAVHNHYKRLNHAQ----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G+ +EL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ---------------KGGD--------IELAKSNILLIGPTGCGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +++++VE AQRGIVYIDEVDKI K+E+ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 200 DVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+ R + S++GFGA VR N G + ++ DL+ +GLIPEF+GR P+L +
Sbjct: 258 AARGKGSAMGFGADVRGNDDRG-------VGEIFTDLEPEDLLKFGLIPEFVGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED LV +L +PKNAL +QY+++F + + +L FTDDAL IAK+A+ + TGARGLR
Sbjct: 311 LEDLDEDALVTILTQPKNALVKQYQRLFELEDTELTFTDDALSAIAKRAIERKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELE 484
++LE+IL + MF++P G SV V+V++EAV S AP ++H D E
Sbjct: 371 SILEDILLDTMFDLP----GLESVTEVVVNEEAVNSDAAP----LMIHADASKE 416
>sp|Q1GGF7|CLPX_RUEST ATP-dependent Clp protease ATP-binding subunit ClpX OS=Ruegeria sp.
(strain TM1040) GN=clpX PE=3 SV=1
Length = 421
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/410 (48%), Positives = 272/410 (66%), Gaps = 60/410 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPK+IC+ LD++VIGQ AK+ AV+NHYKR+ H+
Sbjct: 63 VPTPKDICEVLDDYVIGQATAKRV---------------LSVAVHNHYKRLNHAQ----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+GN +EL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ---------------KAGN-------DIELSKSNILLIGPTGCGKTLLAQTLARILDVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K+E+ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 201 DVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 258
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+R + S++GFGA VR G ++ DL+ +GLIPEF+GR P+L +
Sbjct: 259 KQRGKGSAMGFGADVREESDAG-------VGETFRDLEPEDLLKFGLIPEFVGRLPVLAT 311
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+ +L +PKNAL +QY+++F + + +L FTD+AL IAKKA+ + TGARGLR
Sbjct: 312 LEDLDEDALITILTKPKNALVKQYQRLFELEDTELDFTDEALSAIAKKAIERKTGARGLR 371
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGD 480
++LE+IL + MFE+P G SV V+V++EAV S P ++H D
Sbjct: 372 SILEDILLDTMFELP----GMESVTKVVVNEEAVCSEAQP----LMIHAD 413
>sp|C3MA45|CLPX_RHISN ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhizobium
sp. (strain NGR234) GN=clpX PE=3 SV=1
Length = 425
Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/402 (50%), Positives = 271/402 (67%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EI K LDE+VIGQ++AK+ IL AV+NHYKR+ H++
Sbjct: 66 VPTPQEIIKVLDEYVIGQQQAKR-----IL----------SVAVHNHYKRLAHAA----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
KS + VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KSSD--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGFGA VR+ + R G +L ++ DLV +GLIPEFIGR P+L
Sbjct: 261 SARGEKTSIGFGATVRSPEDRRVG---------EVLRELEPEDLVKFGLIPEFIGRLPVL 311
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+ED L+Q+L EPKNAL +QY+++F M +V+L F +DALR IAK+A+ + TGARG
Sbjct: 312 ATLEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELTFHEDALREIAKRAIIRKTGARG 371
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E IL + MFE+P + V V++ E V P
Sbjct: 372 LRSIMEKILLDTMFELPTLE----GVREVVISDEVVKGTARP 409
>sp|B5ZY09|CLPX_RHILW ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhizobium
leguminosarum bv. trifolii (strain WSM2304) GN=clpX PE=3
SV=1
Length = 425
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/394 (51%), Positives = 268/394 (68%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ +AKK IL AV+NHYKR+ H+S
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKK-----IL----------SVAVHNHYKRLAHAS----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KNGE--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V+A D +L ++ DLV +GLIPEFIGR P+L +
Sbjct: 261 SARGEKTSIGFGATVKAQ-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EPKNAL +QY+++F M +V+L F +DALR IA+KA+ + TGARGLR
Sbjct: 314 LEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELTFHEDALREIARKAIVRKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E IL + MFE+P + V V++ +E V
Sbjct: 374 SIMEKILLDTMFELPTLE----GVREVVISEEVV 403
>sp|Q2W3I0|CLPX_MAGSA ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Magnetospirillum magneticum (strain AMB-1 / ATCC
700264) GN=clpX PE=3 SV=1
Length = 421
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/394 (50%), Positives = 267/394 (67%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTPK+IC+ LD++VIGQ AKK AV+NHYKR+ H
Sbjct: 63 VPTPKDICQVLDDYVIGQSHAKKV---------------LSVAVHNHYKRLQHGG----- 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+N+E VEL KSN+LL+GPTG GKTLLA+TLARI++VPF
Sbjct: 103 ----------------------KNNE-VELAKSNILLIGPTGCGKTLLAQTLARILDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AA+++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAAEYNVERAQRGIVYIDEVDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R + +SIGFGA VR D T +L V+ DL+ +GLIPEF+GR P+L +
Sbjct: 258 GSRGRGTSIGFGADVRG-------PDERRTGEILREVEPEDLLKFGLIPEFVGRLPVLAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ D L+ +L +PKNAL +QY+++F M + +L F+DDAL+ IA+KA+A+ TGARGLR
Sbjct: 311 LEDLDVDALIDILSKPKNALVKQYQRLFEMEDTRLAFSDDALKAIAEKAIARKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E IL + MF++P G +V+ V+++KE V
Sbjct: 371 SIMETILLDTMFDLP----GLDAVDEVVINKEVV 400
>sp|B7KBH7|CLPX_CYAP7 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Cyanothece
sp. (strain PCC 7424) GN=clpX PE=3 SV=1
Length = 447
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/431 (47%), Positives = 271/431 (62%), Gaps = 50/431 (11%)
Query: 35 EEIMGGFIRKDGESNGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKK 94
EE+M S + +R+R S G I P P+EI K LDE+VIGQ AKK
Sbjct: 45 EELMEAPTSPVASSVSSREDRPKRRSSRDRLSLGQI--PKPREIKKYLDEYVIGQNEAKK 102
Query: 95 SHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVE 154
AVYNHYKR+ S +Q + G+G
Sbjct: 103 V---------------LSVAVYNHYKRL--SDIQAKRT----------GTGA-------- 127
Query: 155 NDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLY 214
D+ VEL+KSN+LLMGPTGSGKTLLA+TLA+I++VPF + DAT LT+AGYVGED E++L
Sbjct: 128 TDDPVELQKSNILLMGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILL 187
Query: 215 KLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVP 273
+LL AD DVE AQRGI+YIDE+DKI K+E+ + RDVSGEGVQQALLKMLEGTV NVP
Sbjct: 188 RLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVP 247
Query: 274 IPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGG 333
P G RKHP D I IDT +ILFICGGAFVGL+K + +R S+GF P G
Sbjct: 248 -PQGG-RKHPYQDCIQIDTSNILFICGGAFVGLDKIVEQRLGKKSMGFIRPAE------G 299
Query: 334 LTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQ 393
+ ++ LL+ ++ DLV +G+IPEF+GR P++ SL L+ED L+ +L +P+NAL +Q
Sbjct: 300 TSKEKWSADLLKQLEPDDLVKFGMIPEFVGRIPVMASLDPLDEDALIAILTQPRNALVKQ 359
Query: 394 YKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSS 453
Y+K+ M+NV+L F +A+R IA++A + TGAR LR ++E ++ E M+E+P K
Sbjct: 360 YQKLLKMDNVQLEFKSEAVRAIAQEAYRRKTGARALRGIVEELMLEVMYELPSRK----D 415
Query: 454 VNAVLVDKEAV 464
V L+ +E V
Sbjct: 416 VKRCLITREMV 426
>sp|Q1MIM6|CLPX_RHIL3 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhizobium
leguminosarum bv. viciae (strain 3841) GN=clpX PE=3 SV=1
Length = 425
Score = 365 bits (936), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/394 (50%), Positives = 269/394 (68%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ +AKK IL AV+NHYKR+ H+S
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKK-----IL----------SVAVHNHYKRLAHAS----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K+G VEL KSN++L+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KNGE--------VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
S R + +SIGFGA V++ D +L ++ DLV +GLIPEFIGR P+L +
Sbjct: 261 SARGEKTSIGFGASVKSQ-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLAT 313
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EPKNAL +QY+++F M +V+L+F +DALR IA+KA+ + TGARGLR
Sbjct: 314 LEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELNFHEDALREIARKAIVRKTGARGLR 373
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E IL + MFE+P + V V++ +E V
Sbjct: 374 SIMEKILLDTMFELPTLE----GVREVVISEEVV 403
>sp|A1S4X6|CLPX_SHEAM ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
amazonensis (strain ATCC BAA-1098 / SB2B) GN=clpX PE=3
SV=1
Length = 425
Score = 365 bits (936), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 262/401 (65%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP E+ LD++VIGQE+AKK AVYNHYKR+ ++
Sbjct: 64 LPTPHELRAHLDDYVIGQEKAKKV---------------LSVAVYNHYKRLRNA------ 102
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G K G VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF
Sbjct: 103 -------------GPKDG---------VELGKSNILLIGPTGSGKTLLAETLARFLNVPF 140
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 141 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 200
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GLEK I
Sbjct: 201 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLEKVI 258
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R S IGFGA V+ ++D +L V+ DLV YGLIPEFIGR P++
Sbjct: 259 EQRTHTGSGIGFGAQVKGKEEKESMSD------ILSQVEPEDLVKYGLIPEFIGRLPVVA 312
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+ED L+Q+L EPKNAL +QY +F M NV+L F +DAL+ IA+KAM++ TGARGL
Sbjct: 313 TLAELDEDALIQILSEPKNALTKQYAALFEMENVELEFREDALKAIAQKAMSRKTGARGL 372
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E IL + M+++P + V+ +VD+ V AP
Sbjct: 373 RSIVEGILLDTMYDLPSQQ----GVSKAVVDESVVKGESAP 409
>sp|B9JVD6|CLPX_AGRVS ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Agrobacterium vitis (strain S4 / ATCC BAA-846)
GN=clpX PE=3 SV=1
Length = 425
Score = 365 bits (936), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/402 (50%), Positives = 270/402 (67%), Gaps = 61/402 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP++I K LDE+VIGQ +AKK IL AV+NHYKR+ H+S
Sbjct: 66 VPTPQDIIKILDEYVIGQRQAKK-----IL----------SVAVHNHYKRLSHAS----- 105
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G+ VEL KSN+LL+GPTG GKT LA+TLARI++VPF
Sbjct: 106 ---------------KGGD--------VELAKSNILLVGPTGCGKTYLAQTLARIIDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEVDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLDKII 260
Query: 311 SERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R + +SIGFGA V + + R G +L ++ DLV +GLIPEFIGR P+L
Sbjct: 261 SARGEKTSIGFGATVVSPEDRRVG---------EVLRELEPEDLVKFGLIPEFIGRLPVL 311
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+ED L+Q+L EPKNAL +QY+++F M +V+L F +DALR IA+KA+ + TGARG
Sbjct: 312 ATLEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELSFHEDALREIARKAITRKTGARG 371
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR+++E IL + MFE+PE + V V++ E V P
Sbjct: 372 LRSIMEKILLDTMFELPELE----GVREVVISDEVVRGAARP 409
>sp|A6LT28|CLPX_CLOB8 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Clostridium
beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=clpX
PE=3 SV=1
Length = 429
Score = 363 bits (933), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 199/400 (49%), Positives = 266/400 (66%), Gaps = 57/400 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P P EI + LD +VIGQERAKKS AVYNHYKRI
Sbjct: 60 VPKPNEIKEYLDSYVIGQERAKKS---------------LAVAVYNHYKRI--------- 95
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N N E+ + VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF
Sbjct: 96 ------------------NTNKEDID-VELSKSNILLLGPTGSGKTLLAQTLARFLNVPF 136
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ AD+DVE A+RGI+YIDE+DKI K+E+ + R
Sbjct: 137 AIADATTLTEAGYVGEDVENILLKLIQNADYDVEKAERGIIYIDEIDKIARKSENPSITR 196
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK+LEGTV +VP P G RKHP + I I+T +ILFICGGAF G++K I
Sbjct: 197 DVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQINTSNILFICGGAFDGVDKII 254
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R + SS+GFGA ++A SLL+ + DL+ +GLIPEF+GR PILV+
Sbjct: 255 ENRTRKSSMGFGAQIQAKHEKD-------VGSLLKEIMPADLLKFGLIPEFVGRLPILVT 307
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L +L+++ L+Q+L +PKNAL +QYKK+F +++VKL F + +L IA++A+++ TGARGLR
Sbjct: 308 LESLDKEALIQILTKPKNALVKQYKKLFELDDVKLEFDEKSLIAIAEEAISRQTGARGLR 367
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
A++E+I+ E M+EIP + + V++ +EA+ P
Sbjct: 368 AIIEDIMNEIMYEIP----SDNRITNVIITEEAIKEKKQP 403
>sp|Q5LUP9|CLPX_RUEPO ATP-dependent Clp protease ATP-binding subunit ClpX OS=Ruegeria
pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
GN=clpX PE=3 SV=1
Length = 424
Score = 363 bits (933), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 197/408 (48%), Positives = 276/408 (67%), Gaps = 59/408 (14%)
Query: 64 RNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIY 123
++S+G +PTP++IC LD++VIGQ AK+ AV+NHYKR+
Sbjct: 60 KSSDG---VPTPRDICDVLDDYVIGQSTAKRV---------------LSVAVHNHYKRLN 101
Query: 124 HSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTL 183
H+ K+G+ +EL KSN+LL+GPTG GKTLLA+TL
Sbjct: 102 HAQ--------------------KAGS-------DIELAKSNILLIGPTGCGKTLLAQTL 134
Query: 184 ARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-K 242
ARI++VPFT+ DAT LT+AGYVGED E+++ KLL A++++VE AQRGIVYIDEVDKI K
Sbjct: 135 ARILDVPFTMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRK 194
Query: 243 AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGA 302
+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGA
Sbjct: 195 SENPSITRDVSGEGVQQALLKLMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGA 252
Query: 303 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFI 362
F GL+K I++R + S++GFGA VRA+ G L ++ DL+ +GLIPEF+
Sbjct: 253 FAGLDKIIAQRGKGSAMGFGADVRASDERG-------VGELFTELEPEDLLKFGLIPEFV 305
Query: 363 GRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAK 422
GR P+L +L L+ED LV +L +PKNAL +QY+++F + + +L FTDDAL+ IAK+A+ +
Sbjct: 306 GRLPVLATLEDLDEDALVTILTKPKNALVKQYQRLFELEDTELDFTDDALKAIAKRAIER 365
Query: 423 NTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
TGARGLR+++E+IL + MF++P +V V+V++EAV S P
Sbjct: 366 KTGARGLRSIMEDILLDTMFDLP----SMDNVTKVVVNEEAVTSDAQP 409
>sp|Q07ZX9|CLPX_SHEFN ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
frigidimarina (strain NCIMB 400) GN=clpX PE=3 SV=1
Length = 426
Score = 363 bits (933), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 264/401 (65%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP E+ K LD++VIGQ++AKK AVYNHYKR+ + +
Sbjct: 65 LPTPHELRKHLDDYVIGQDQAKKV---------------LAVAVYNHYKRLRNGA----- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+K G VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF
Sbjct: 105 --------------IKDG---------VELGKSNILLLGPTGSGKTLLAETLARSLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
+ DAT LT+AGYVGED E+++ KLL D+DVE A+RGIVYIDE+DKI K+++ + R
Sbjct: 142 AMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAERGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLEKVI 259
Query: 311 SERRQDSS-IGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + IGFGA V+ G D S +L V+ GDLV +GLIPEFIGR P++
Sbjct: 260 EQRAHTGTGIGFGAEVK------GEADKATISQILSQVEPGDLVKFGLIPEFIGRLPVVA 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E LVQ+L EPKNAL +QY +F M +V+L F DDAL+ IA+KAM++ TGARGL
Sbjct: 314 TLTELDEAALVQILSEPKNALTKQYSALFEMEDVELEFRDDALQAIAQKAMSRKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E+IL + M++IP T+ V +VD+ V AP
Sbjct: 374 RSIVESILLDTMYDIPSTQ----GVIKAVVDESVVKGESAP 410
>sp|Q0VQ89|CLPX_ALCBS ATP-dependent Clp protease ATP-binding subunit ClpX OS=Alcanivorax
borkumensis (strain SK2 / ATCC 700651 / DSM 11573)
GN=clpX PE=3 SV=1
Length = 426
Score = 363 bits (931), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 203/400 (50%), Positives = 261/400 (65%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LDE+VIGQERAKK AVYNHYKR
Sbjct: 65 LPKPNEIKDTLDEYVIGQERAKKV---------------LAVAVYNHYKR---------- 99
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
L SG K DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 100 ----------LRSGGKG------RDE-VELGKSNILLIGPTGSGKTLLAETLARMLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ++LFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTSNMLFICGGAFAGLDKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
ER + IGF A V++ T L + LV V+ DLV YGLIPEFIGR P++ +
Sbjct: 261 RERSEKGGIGFSAEVKSKDNTRNLGELLV------DVEPEDLVKYGLIPEFIGRLPVIAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+ED L+Q+L EP+NAL +QY ++F M V+L F +DAL+ IA KAM + TGARGLR
Sbjct: 315 LEELSEDALIQILTEPRNALTKQYARLFEMEGVELDFREDALKAIANKAMVRKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE++L + M+++P + SV V++D + P
Sbjct: 375 SILESVLLDTMYQVPSME----SVAKVVIDSPTIKGESEP 410
>sp|Q8EG18|CLPX_SHEON ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
oneidensis (strain MR-1) GN=clpX PE=3 SV=1
Length = 426
Score = 363 bits (931), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 207/404 (51%), Positives = 259/404 (64%), Gaps = 57/404 (14%)
Query: 69 NIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQ 128
N LPTP E+ LD++VIGQ+RAKK AVYNHYKR+ +SS
Sbjct: 62 NDKLPTPHELRAHLDDYVIGQDRAKKV---------------LSVAVYNHYKRLKNSS-- 104
Query: 129 KELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVN 188
K G VEL KSN+LL+GPTGSGKTLLA+TLAR +N
Sbjct: 105 -----------------PKDG---------VELGKSNILLIGPTGSGKTLLAETLARSLN 138
Query: 189 VPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRN 247
VPFT+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ +
Sbjct: 139 VPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPS 198
Query: 248 NGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLE 307
RDVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GLE
Sbjct: 199 ITRDVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLE 256
Query: 308 KTISERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFP 366
K I +R S IGFGA V+ G D S L V+ GDLV YGLIPEFIGR P
Sbjct: 257 KVIEQRAHVGSGIGFGAQVK------GEKDKATISETLSQVEPGDLVKYGLIPEFIGRLP 310
Query: 367 ILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGA 426
++ +L+ L+E+ LVQ+L EPKNAL +QY +F M V+L F +DAL+ IA KAM++ TGA
Sbjct: 311 VVATLTELDEEALVQILSEPKNALTKQYNALFEMEGVELEFREDALKAIAHKAMSRKTGA 370
Query: 427 RGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RGLR+++E IL + M++IP V +VD+ V AP
Sbjct: 371 RGLRSIVEGILLDTMYDIP----SIDGVVKAVVDESVVNGESAP 410
>sp|A8MIS7|CLPX_ALKOO ATP-dependent Clp protease ATP-binding subunit ClpX OS=Alkaliphilus
oremlandii (strain OhILAs) GN=clpX PE=3 SV=1
Length = 426
Score = 362 bits (930), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 198/402 (49%), Positives = 265/402 (65%), Gaps = 56/402 (13%)
Query: 70 IDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQK 129
+DLP P EI LD++VIGQE+AKK+ AVYNHYKRI
Sbjct: 58 MDLPKPSEIKDILDQYVIGQEKAKKA---------------LAVAVYNHYKRIN------ 96
Query: 130 ELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNV 189
V D VKSG+ VEL+KSN+L++GPTGSGKTLLA+TLA+I+NV
Sbjct: 97 --VED-----------VKSGD--------VELQKSNILMLGPTGSGKTLLAQTLAKIINV 135
Query: 190 PFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNN 248
PF I DAT+LT+AGYVGED E++L KL+ AAD+D+E A++GI+YIDEVDKI K+E+ +
Sbjct: 136 PFAIADATSLTEAGYVGEDVENILLKLIQAADYDIERAEKGIIYIDEVDKIARKSENPSI 195
Query: 249 GRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEK 308
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I IDT +ILFI GGAF G++
Sbjct: 196 TRDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQIDTTNILFIVGGAFDGIDS 253
Query: 309 TISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
I +R S+GFGA + + L SLL+ + DL+ +GLIPEF+GR P++
Sbjct: 254 IIQKRTSKKSMGFGAEIESKQ-------VLDLGSLLKQIQPEDLLKFGLIPEFVGRLPVV 306
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
V+L L+E+ L+++L EPKNAL +QYK++F ++ V L ++ALRLIAKKA+ + TGARG
Sbjct: 307 VTLEQLDEEALIKILTEPKNALTKQYKRLFEIDGVHLEIEEEALRLIAKKAIERKTGARG 366
Query: 429 LRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
LR ++E I+ + M+EIP + V++ EA+ P
Sbjct: 367 LRGIVEGIMMDTMYEIP----SRDDIEKVIITAEAITENKEP 404
>sp|A1RL88|CLPX_SHESW ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
sp. (strain W3-18-1) GN=clpX PE=3 SV=1
Length = 426
Score = 362 bits (930), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 205/401 (51%), Positives = 259/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP E+ LD++VIGQ+RAKK AVYNHYKR+ +SS
Sbjct: 65 LPTPHELRAHLDDYVIGQDRAKKV---------------LSVAVYNHYKRLKNSS----- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF
Sbjct: 105 --------------PKDG---------VELGKSNILLIGPTGSGKTLLAETLARSLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLEKVI 259
Query: 311 SERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R S IGFGA V+ G D S L V+ GDLV YGLIPEFIGR P++
Sbjct: 260 EQRAHVGSGIGFGAQVK------GEKDKATISETLSQVEPGDLVKYGLIPEFIGRLPVVA 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ LVQ+L +PKNAL +QY +F M V+L F +DAL+ IA KAM++ TGARGL
Sbjct: 314 TLTELDEEALVQILSQPKNALTKQYSALFEMEGVELEFREDALKAIAHKAMSRKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E+IL + M++IP V +VD+ V AP
Sbjct: 374 RSIVESILLDTMYDIP----SVDGVVKAVVDESVVNGESAP 410
>sp|A4Y5I3|CLPX_SHEPC ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
putrefaciens (strain CN-32 / ATCC BAA-453) GN=clpX PE=3
SV=1
Length = 426
Score = 362 bits (930), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 205/401 (51%), Positives = 259/401 (64%), Gaps = 57/401 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP E+ LD++VIGQ+RAKK AVYNHYKR+ +SS
Sbjct: 65 LPTPHELRAHLDDYVIGQDRAKKV---------------LSVAVYNHYKRLKNSS----- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
K G VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF
Sbjct: 105 --------------PKDG---------VELGKSNILLIGPTGSGKTLLAETLARSLNVPF 141
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + R
Sbjct: 142 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 201
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GLEK I
Sbjct: 202 DVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLEKVI 259
Query: 311 SERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R S IGFGA V+ G D S L V+ GDLV YGLIPEFIGR P++
Sbjct: 260 EQRAHVGSGIGFGAQVK------GEKDKATISETLSQVEPGDLVKYGLIPEFIGRLPVVA 313
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ LVQ+L +PKNAL +QY +F M V+L F +DAL+ IA KAM++ TGARGL
Sbjct: 314 TLTELDEEALVQILSQPKNALTKQYSALFEMEGVELEFREDALKAIAHKAMSRKTGARGL 373
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R+++E+IL + M++IP V +VD+ V AP
Sbjct: 374 RSIVESILLDTMYDIP----SVDGVVKAVVDESVVNGESAP 410
>sp|A5W634|CLPX_PSEP1 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Pseudomonas
putida (strain F1 / ATCC 700007) GN=clpX PE=3 SV=1
Length = 427
Score = 362 bits (929), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 199/400 (49%), Positives = 259/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ + DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKGDE-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGFGA VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTKGGIGFGAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M +V L F DAL+ +A+KA+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYAKLFEMESVDLEFRSDALKAVARKALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP K V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIPSKK----DVSKVVIDESVIEGTSQP 410
>sp|B0KJG7|CLPX_PSEPG ATP-dependent Clp protease ATP-binding subunit ClpX OS=Pseudomonas
putida (strain GB-1) GN=clpX PE=3 SV=1
Length = 427
Score = 362 bits (929), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 199/400 (49%), Positives = 259/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ + DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKGDE-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGFGA VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTKGGIGFGAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M +V L F DAL+ +A+KA+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYAKLFEMESVDLEFRSDALKAVARKALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP K V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIPSKK----EVSKVVIDESVIEGTSQP 410
>sp|B6ISY6|CLPX_RHOCS ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Rhodospirillum centenum (strain ATCC 51521 / SW)
GN=clpX PE=3 SV=1
Length = 421
Score = 362 bits (928), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 198/394 (50%), Positives = 268/394 (68%), Gaps = 57/394 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+P+P++IC LD++VIGQE AK+ AV+NHYKR+ H
Sbjct: 63 VPSPRDICAVLDDYVIGQEHAKRV---------------LSVAVHNHYKRLAH------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
G K ND VEL KSN+LL+GPTGSGKTLLA+TLARI++VPF
Sbjct: 101 -------------GAK------HND--VELAKSNILLIGPTGSGKTLLAQTLARIIDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLE+ I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERII 257
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
+ R + +SIGFGA VRA D T +L V+ DL+ +GLIPEF+GR P++ +
Sbjct: 258 AARGKGTSIGFGADVRA-------PDERRTGDILREVEPEDLLKFGLIPEFVGRLPVVAT 310
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E+ L+++L +PKNAL +QY+++F M +VKL ++ALR IA KA+ + TGARGLR
Sbjct: 311 LHDLDENALIEILTKPKNALVKQYQRLFEMEDVKLGIHEEALRSIAVKAIQRKTGARGLR 370
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 464
+++E+IL E MF++P G V ++++KE V
Sbjct: 371 SIMESILLEPMFDLP----GLQGVEEIVINKEVV 400
>sp|P0CAU2|CLPX_CAUCR ATP-dependent Clp protease ATP-binding subunit ClpX OS=Caulobacter
crescentus (strain ATCC 19089 / CB15) GN=clpX PE=1 SV=1
Length = 420
Score = 362 bits (928), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 198/377 (52%), Positives = 255/377 (67%), Gaps = 57/377 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EIC+ LD++VIGQ AKK AV+NHYKR+ H+S
Sbjct: 63 VPTPREICEVLDDYVIGQGHAKKV---------------LAVAVHNHYKRLNHASKN--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTG+GKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLVGPTGTGKTLLAQTLARIIDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIVLKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 257
Query: 311 SERRQDSSIGFGAPVR--ANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R SIGFGA V RTG +L +V+ DL +GLIPEFIGR P++
Sbjct: 258 SARGAAKSIGFGAKVTDPEERRTG---------EILRNVEPDDLQRFGLIPEFIGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E LV++L EPKNA +QY+++F M N+ L FT+DAL +AKKA+A+ TGARG
Sbjct: 309 ATLEDLDEAALVKILTEPKNAFVKQYQRLFEMENIGLTFTEDALHQVAKKAIARKTGARG 368
Query: 429 LRALLENILTEAMFEIP 445
LR+++E IL E MFE+P
Sbjct: 369 LRSIMEGILLETMFELP 385
>sp|B8GX14|CLPX_CAUCN ATP-dependent Clp protease ATP-binding subunit ClpX OS=Caulobacter
crescentus (strain NA1000 / CB15N) GN=clpX PE=3 SV=1
Length = 420
Score = 362 bits (928), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 198/377 (52%), Positives = 255/377 (67%), Gaps = 57/377 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EIC+ LD++VIGQ AKK AV+NHYKR+ H+S
Sbjct: 63 VPTPREICEVLDDYVIGQGHAKKV---------------LAVAVHNHYKRLNHASKN--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTG+GKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLVGPTGTGKTLLAQTLARIIDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIVLKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLEK I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKII 257
Query: 311 SERRQDSSIGFGAPVR--ANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R SIGFGA V RTG +L +V+ DL +GLIPEFIGR P++
Sbjct: 258 SARGAAKSIGFGAKVTDPEERRTG---------EILRNVEPDDLQRFGLIPEFIGRLPVV 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E LV++L EPKNA +QY+++F M N+ L FT+DAL +AKKA+A+ TGARG
Sbjct: 309 ATLEDLDEAALVKILTEPKNAFVKQYQRLFEMENIGLTFTEDALHQVAKKAIARKTGARG 368
Query: 429 LRALLENILTEAMFEIP 445
LR+++E IL E MFE+P
Sbjct: 369 LRSIMEGILLETMFELP 385
>sp|Q8RC24|CLPX_THETN ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Thermoanaerobacter tengcongensis (strain DSM 15242 /
JCM 11007 / NBRC 100824 / MB4) GN=clpX PE=3 SV=1
Length = 425
Score = 361 bits (927), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 263/401 (65%), Gaps = 57/401 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
DLP PKEI LD++VIGQ+RAKK+ AVYNHYKRI
Sbjct: 59 DLPKPKEIKAFLDQYVIGQDRAKKA---------------LAVAVYNHYKRI-------- 95
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
N V++D+ VEL+KSN+LL+GPTGSGKTLLA+TLA+++NVP
Sbjct: 96 -------------------NSKVKSDD-VELQKSNILLLGPTGSGKTLLAQTLAKLLNVP 135
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT LT+AGYVGED E++L +L+ AAD+D+E A++GI+YIDE+DKI K+E+ +
Sbjct: 136 FAIADATTLTEAGYVGEDVENILLRLIQAADYDIERAEKGIIYIDEIDKIARKSENPSIT 195
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGT+ NVP P G RKHP + I IDT +ILFICGGAF G++K
Sbjct: 196 RDVSGEGVQQALLKILEGTIANVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFEGIDKI 253
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R S+GFGA V++ +L+ + DL+ +G+IPEFIGR PI+V
Sbjct: 254 IESRIGKKSLGFGAEVQSKKEKD-------VGEILKHIMPEDLLKFGMIPEFIGRVPIVV 306
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L L +D LV++L EPKNAL +QY+K+F M+ VKL F AL LIA+ A+ + TGARGL
Sbjct: 307 TLDPLTKDDLVRILTEPKNALVKQYEKLFEMDGVKLEFEKKALDLIAEMALERGTGARGL 366
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RA+LE+I+ + M+EIP ++ ++ +E V + P
Sbjct: 367 RAILEDIMLDVMYEIP----SDETIEKCIITEETVRKIAPP 403
>sp|Q88KI9|CLPX_PSEPK ATP-dependent Clp protease ATP-binding subunit ClpX OS=Pseudomonas
putida (strain KT2440) GN=clpX PE=3 SV=1
Length = 442
Score = 361 bits (927), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 199/400 (49%), Positives = 259/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 80 LPSPKEISGILDQYVIGQERAKKV---------------LAVAVYNHYKRLNQR------ 118
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ + DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 119 --------------------DKKGDE-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 157
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 158 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 217
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 218 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 275
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGFGA VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 276 QNRSTKGGIGFGAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 329
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY K+F M +V L F DAL+ +A+KA+ + TGARGLR
Sbjct: 330 LDELDEAALMQILTEPKNALTKQYAKLFEMESVDLEFRSDALKAVARKALERKTGARGLR 389
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP K V+ V++D+ + P
Sbjct: 390 SILEGVLLDTMYEIPSKK----DVSKVVIDESVIEGTSQP 425
>sp|B1J693|CLPX_PSEPW ATP-dependent Clp protease ATP-binding subunit ClpX OS=Pseudomonas
putida (strain W619) GN=clpX PE=3 SV=1
Length = 427
Score = 361 bits (927), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 259/400 (64%), Gaps = 55/400 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP+PKEI LD++VIGQERAKK AVYNHYKR+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKV---------------LSVAVYNHYKRLNQR------ 103
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
+ + DE VEL KSN+LL+GPTGSGKTLLA+TLAR++NVPF
Sbjct: 104 --------------------DKKGDE-VELGKSNILLIGPTGSGKTLLAETLARLLNVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
TI DAT LT+AGYVGED E+++ KLL D+DVE AQ GIVYIDE+DKI K+++ + R
Sbjct: 143 TIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT++ILFICGGAF GLEK I
Sbjct: 203 DVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEFLQVDTRNILFICGGAFSGLEKVI 260
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R IGFGA VR+ + ++ L V+ DLV +GLIPEF+GR P+L +
Sbjct: 261 QNRSTKGGIGFGAEVRSKEEGKKVGES------LREVEPDDLVKFGLIPEFVGRLPVLAT 314
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
L L+E L+Q+L EPKNAL +QY ++F M +V L F DAL+ +A+KA+ + TGARGLR
Sbjct: 315 LDELDEAALMQILTEPKNALTKQYARLFEMESVDLEFRSDALKAVARKALERKTGARGLR 374
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
++LE +L + M+EIP K V+ V++D+ + P
Sbjct: 375 SILEGVLLDTMYEIPSQK----EVSKVVIDESVIEGTSQP 410
>sp|B0TFI7|CLPX_HELMI ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Heliobacterium modesticaldum (strain ATCC 51547 /
Ice1) GN=clpX PE=3 SV=1
Length = 420
Score = 361 bits (926), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 193/376 (51%), Positives = 255/376 (67%), Gaps = 53/376 (14%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
D+P PKEI + LD++VIGQE+AKK+ AVYNHYKRI
Sbjct: 61 DVPKPKEIREILDQYVIGQEQAKKA---------------LSVAVYNHYKRIN------- 98
Query: 131 LVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVP 190
LGS + +EL+KSN++++GPTGSGKTLLA+TLARI+NVP
Sbjct: 99 -----------LGSKIDD----------IELQKSNIIMLGPTGSGKTLLAQTLARILNVP 137
Query: 191 FTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNG 249
F I DAT+LT+AGYVGED E++L KL+ AAD+DVE A++GIVYIDE+DKI K+E+ +
Sbjct: 138 FAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSIT 197
Query: 250 RDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKT 309
RDVSGEGVQQALLK+LEGTV +VP P G RKHP + I +DT +ILFICGGAF G+EK
Sbjct: 198 RDVSGEGVQQALLKILEGTVASVP-PQGG-RKHPHQEFIQLDTTNILFICGGAFDGIEKL 255
Query: 310 ISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
I R ++GF A ++ L + DL+ +GLIPEF+GR P++V
Sbjct: 256 IMNRIGKKTMGFNADIKGKQEKK-------IGETLREILPVDLLKFGLIPEFVGRLPVIV 308
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L AL+ED LV++L EPKNAL +QY+K F ++ V+L FTDDALR IA++A+ +NTGARGL
Sbjct: 309 TLDALDEDALVRILTEPKNALVKQYQKFFELDQVQLEFTDDALRAIAQEAIKRNTGARGL 368
Query: 430 RALLENILTEAMFEIP 445
RA+LE ++ + M++IP
Sbjct: 369 RAILEEVMLDVMYDIP 384
>sp|Q8PBY5|CLPX_XANCP ATP-dependent Clp protease ATP-binding subunit ClpX OS=Xanthomonas
campestris pv. campestris (strain ATCC 33913 / NCPPB 528
/ LMG 568) GN=clpX PE=3 SV=1
Length = 428
Score = 361 bits (926), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 203/424 (47%), Positives = 272/424 (64%), Gaps = 62/424 (14%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E R+S LP P+EI + LD++VIGQ RAK++
Sbjct: 48 NDIIREELEEKAQSARSS-----LPKPREILEVLDQYVIGQLRAKRT------------- 89
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKRI S +NDE VEL KSN+LL
Sbjct: 90 --LAVAVYNHYKRIESRS---------------------------KNDE-VELAKSNILL 119
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ
Sbjct: 120 VGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQ 179
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
+GIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ +
Sbjct: 180 QGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEF 237
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQDS-SIGFGAPVRANMRTGGLTDALVTSSLLES 346
+ +DTK+ILFICGGAF GL+K I R D+ IGFGA V+++ R + +L
Sbjct: 238 LQVDTKNILFICGGAFAGLDKVIQARSNDAGGIGFGAKVKSSERKQEV------GKILAE 291
Query: 347 VDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLH 406
V+ DL+ +GLIPEF+GR P++ +L L+E L+++L EPKNA+ +Q+KK+F M +V+L
Sbjct: 292 VEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFEMESVELE 351
Query: 407 FTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
F DAL IAKKA+ + TGARGLR ++E++L + M+E+P +V+ V+VD+ +
Sbjct: 352 FRPDALSAIAKKALKRKTGARGLRTIVESVLLDTMYELP----SQENVSKVVVDESVIEH 407
Query: 467 VDAP 470
P
Sbjct: 408 KSEP 411
>sp|B0RTF5|CLPX_XANCB ATP-dependent Clp protease ATP-binding subunit ClpX OS=Xanthomonas
campestris pv. campestris (strain B100) GN=clpX PE=3
SV=1
Length = 428
Score = 361 bits (926), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 203/424 (47%), Positives = 272/424 (64%), Gaps = 62/424 (14%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E R+S LP P+EI + LD++VIGQ RAK++
Sbjct: 48 NDIIREELEEKAQSARSS-----LPKPREILEVLDQYVIGQLRAKRT------------- 89
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKRI S +NDE VEL KSN+LL
Sbjct: 90 --LAVAVYNHYKRIESRS---------------------------KNDE-VELAKSNILL 119
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ
Sbjct: 120 VGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQ 179
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
+GIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ +
Sbjct: 180 QGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEF 237
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQDS-SIGFGAPVRANMRTGGLTDALVTSSLLES 346
+ +DTK+ILFICGGAF GL+K I R D+ IGFGA V+++ R + +L
Sbjct: 238 LQVDTKNILFICGGAFAGLDKVIQARSNDAGGIGFGAKVKSSERKQEV------GKILAE 291
Query: 347 VDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLH 406
V+ DL+ +GLIPEF+GR P++ +L L+E L+++L EPKNA+ +Q+KK+F M +V+L
Sbjct: 292 VEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFEMESVELE 351
Query: 407 FTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
F DAL IAKKA+ + TGARGLR ++E++L + M+E+P +V+ V+VD+ +
Sbjct: 352 FRPDALSAIAKKALKRKTGARGLRTIVESVLLDTMYELP----SQENVSKVVVDESVIEH 407
Query: 467 VDAP 470
P
Sbjct: 408 KSEP 411
>sp|Q4URL5|CLPX_XANC8 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Xanthomonas
campestris pv. campestris (strain 8004) GN=clpX PE=3
SV=1
Length = 428
Score = 361 bits (926), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 203/424 (47%), Positives = 272/424 (64%), Gaps = 62/424 (14%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E R+S LP P+EI + LD++VIGQ RAK++
Sbjct: 48 NDIIREELEEKAQSARSS-----LPKPREILEVLDQYVIGQLRAKRT------------- 89
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKRI S +NDE VEL KSN+LL
Sbjct: 90 --LAVAVYNHYKRIESRS---------------------------KNDE-VELAKSNILL 119
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFTI DAT LT+AGYVGED E+++ KLL D+DVE AQ
Sbjct: 120 VGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQ 179
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
+GIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ +
Sbjct: 180 QGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEF 237
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQDS-SIGFGAPVRANMRTGGLTDALVTSSLLES 346
+ +DTK+ILFICGGAF GL+K I R D+ IGFGA V+++ R + +L
Sbjct: 238 LQVDTKNILFICGGAFAGLDKVIQARSNDAGGIGFGAKVKSSERKQEV------GKILAE 291
Query: 347 VDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLH 406
V+ DL+ +GLIPEF+GR P++ +L L+E L+++L EPKNA+ +Q+KK+F M +V+L
Sbjct: 292 VEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFEMESVELE 351
Query: 407 FTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
F DAL IAKKA+ + TGARGLR ++E++L + M+E+P +V+ V+VD+ +
Sbjct: 352 FRPDALSAIAKKALKRKTGARGLRTIVESVLLDTMYELP----SQENVSKVVVDESVIEH 407
Query: 467 VDAP 470
P
Sbjct: 408 KSEP 411
>sp|B4SLN2|CLPX_STRM5 ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Stenotrophomonas maltophilia (strain R551-3) GN=clpX
PE=3 SV=1
Length = 429
Score = 361 bits (926), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 204/424 (48%), Positives = 272/424 (64%), Gaps = 62/424 (14%)
Query: 49 NGIESESETENGNRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYV 108
N I E E R+S LP P+EI + LD++VIGQ RAK++
Sbjct: 48 NDIIREELEEKAQSARSS-----LPKPREILEVLDQYVIGQNRAKRT------------- 89
Query: 109 IGACCAVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLL 168
AVYNHYKRI S QK NDE VEL KSN+LL
Sbjct: 90 --LAVAVYNHYKRI--ESRQK-------------------------NDE-VELAKSNILL 119
Query: 169 MGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQ 228
+GPTGSGKTLLA+TLAR++NVPFT+ DAT LT+AGYVGED E+++ KLL D+DVE AQ
Sbjct: 120 VGPTGSGKTLLAETLARLLNVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQ 179
Query: 229 RGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
+GIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P G RKHP+ +
Sbjct: 180 QGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-PQGG-RKHPQQEF 237
Query: 288 IPIDTKDILFICGGAFVGLEKTISERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLES 346
+ +DTK+ILFICGGAF GL+K I R D SIGFGA V++ R + +L
Sbjct: 238 LQVDTKNILFICGGAFAGLDKVIQARSTDVGSIGFGAKVKSAERKQEV------GKVLAE 291
Query: 347 VDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLH 406
V+ DL+ +GLIPEF+GR P++ +L L+E L+++L EPKNA+ +Q+KK+F M NV+L
Sbjct: 292 VEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFEMENVELE 351
Query: 407 FTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
F DAL IA+KA+ + TGARGLR ++E++L + M+++P +V+ V+VD+ +
Sbjct: 352 FRPDALSAIARKALKRKTGARGLRTIVESVLLDTMYDLP----SQENVSKVVVDESVIEH 407
Query: 467 VDAP 470
P
Sbjct: 408 KSEP 411
>sp|B7VHZ9|CLPX_VIBSL ATP-dependent Clp protease ATP-binding subunit ClpX OS=Vibrio
splendidus (strain LGP32) GN=clpX PE=3 SV=1
Length = 426
Score = 361 bits (926), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 262/401 (65%), Gaps = 56/401 (13%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LPTP+EI + LD++VIGQE AKK AVYNHYKR+
Sbjct: 65 LPTPREIREHLDDYVIGQEYAKKV---------------LAVAVYNHYKRL--------- 100
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
++G+ E VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF
Sbjct: 101 ---------------RNGDTTAEG---VELGKSNILLIGPTGSGKTLLAETLARFLDVPF 142
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL D+DV A+RGIVYIDE+DKI KAE+ + R
Sbjct: 143 TMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITR 202
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT ILFICGGAF GL+K I
Sbjct: 203 DVSGEGVQQALLKLVEGTVASVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVI 260
Query: 311 SERRQD-SSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILV 369
+R + S IGFGA VR+ T + + L V+ DLV YGLIPEFIGR P+
Sbjct: 261 EQRVETGSGIGFGAEVRSKDETKTIGE------LFTQVEPEDLVKYGLIPEFIGRLPVTT 314
Query: 370 SLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGL 429
+L+ L+E+ L+Q+L EPKNAL +QY +F + + +L F +DALR IAKKAM + TGARGL
Sbjct: 315 TLTELDEEALIQILCEPKNALTKQYAALFELEDTELEFREDALRAIAKKAMNRKTGARGL 374
Query: 430 RALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
R++LE +L E M+E+P ++ V+ V++D+ + P
Sbjct: 375 RSILEGVLLETMYELP----SSTDVSKVVIDESVINGESEP 411
>sp|B0SZ62|CLPX_CAUSK ATP-dependent Clp protease ATP-binding subunit ClpX OS=Caulobacter
sp. (strain K31) GN=clpX PE=3 SV=1
Length = 420
Score = 360 bits (925), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 197/377 (52%), Positives = 254/377 (67%), Gaps = 57/377 (15%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
+PTP+EIC+ LD++VIGQ AKK AV+NHYKR+ H+S
Sbjct: 63 VPTPREICEVLDDYVIGQNHAKKV---------------LAVAVHNHYKRLNHASKN--- 104
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
ND VEL KSN+LL+GPTG+GKTLLA+TLARI++VPF
Sbjct: 105 -----------------------ND--VELAKSNILLVGPTGTGKTLLAQTLARIIDVPF 139
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
T+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDE+DKI K+++ + R
Sbjct: 140 TMADATTLTEAGYVGEDVENIVLKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITR 199
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQALLK++EGTV +VP P G RKHP+ + + +DT +ILFICGGAF GLE+ I
Sbjct: 200 DVSGEGVQQALLKIMEGTVASVP-PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLERII 257
Query: 311 SERRQDSSIGFGAPVR--ANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPIL 368
S R Q SIGFGA V RTG +L V+ DL +GLIPEFIGR P++
Sbjct: 258 SARGQGKSIGFGAKVADPEERRTG---------EILRGVEPDDLQRFGLIPEFIGRLPVI 308
Query: 369 VSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARG 428
+L L+E LV++L EPKNA +QY+++F M N+ L FT+DAL +AKKA+ + TGARG
Sbjct: 309 ATLEDLDEAALVKILTEPKNAFVKQYQRLFEMENIGLTFTEDALHGVAKKAILRKTGARG 368
Query: 429 LRALLENILTEAMFEIP 445
LR+++E IL E MFE+P
Sbjct: 369 LRSIMEGILLETMFELP 385
>sp|A0KYL8|CLPX_SHESA ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
sp. (strain ANA-3) GN=clpX PE=3 SV=1
Length = 426
Score = 360 bits (924), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 206/404 (50%), Positives = 259/404 (64%), Gaps = 57/404 (14%)
Query: 69 NIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQ 128
N LPTP E+ LD++VIGQ+RAKK AVYNHYKR+ +SS
Sbjct: 62 NDKLPTPHELRAHLDDYVIGQDRAKKV---------------LSVAVYNHYKRLRNSS-- 104
Query: 129 KELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVN 188
K G VEL KSN+LL+GPTGSGKTLLA+TLAR +N
Sbjct: 105 -----------------PKDG---------VELGKSNILLIGPTGSGKTLLAETLARSLN 138
Query: 189 VPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRN 247
VPFT+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ +
Sbjct: 139 VPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPS 198
Query: 248 NGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLE 307
RDVSGEGVQQALLK++EGTV VP P G RKHP+ + + +DT ILFICGGAF GLE
Sbjct: 199 ITRDVSGEGVQQALLKLIEGTVAAVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLE 256
Query: 308 KTISERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFP 366
K I +R S IGFGA V+ G D S L V+ DLV YGLIPEFIGR P
Sbjct: 257 KVIEQRAHVGSGIGFGAQVK------GEKDKATISQTLSQVEPEDLVKYGLIPEFIGRLP 310
Query: 367 ILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGA 426
++ +L+ L+E+ LVQ+L EPKNAL +QY +F M V+L F +DAL+ IA KAM++ TGA
Sbjct: 311 VVATLTELDEEALVQILSEPKNALTKQYNALFEMEGVELEFREDALKAIAHKAMSRKTGA 370
Query: 427 RGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 470
RGLR+++E IL + M++IP + V +VD+ V AP
Sbjct: 371 RGLRSIVEGILLDTMYDIPSIE----GVVKAVVDESVVNGESAP 410
>sp|Q891J8|CLPX_CLOTE ATP-dependent Clp protease ATP-binding subunit ClpX OS=Clostridium
tetani (strain Massachusetts / E88) GN=clpX PE=3 SV=1
Length = 431
Score = 360 bits (924), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 195/396 (49%), Positives = 266/396 (67%), Gaps = 57/396 (14%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKEL 131
LP P EI LD++VIGQ+ AKK+ AVYNHYKRI
Sbjct: 62 LPKPSEIKSYLDDYVIGQDDAKKA---------------LSVAVYNHYKRI--------- 97
Query: 132 VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 191
N N ND+ VEL+KSN+LL+GPTGSGKTLLA+T+A+ +NVPF
Sbjct: 98 ------------------NLNNVNDD-VELQKSNILLLGPTGSGKTLLAQTMAKFLNVPF 138
Query: 192 TITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGR 250
I DAT LT+AGYVGED E++L KL+ AD+D+E A+RGI+YIDE+DKI K+E+ + R
Sbjct: 139 AIADATTLTEAGYVGEDVENILLKLIQNADYDIEKAERGIIYIDEIDKIARKSENPSITR 198
Query: 251 DVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTI 310
DVSGEGVQQ+LLK+LEGT+ +VP P G RKHP + I ++T +ILFICGGAF G++K I
Sbjct: 199 DVSGEGVQQSLLKILEGTIASVP-PQGG-RKHPHQEFIQLNTTNILFICGGAFDGVDKLI 256
Query: 311 SERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVS 370
R ++SS+GFGA +++ LL+ + DL+ +GLIPEFIGR PI V+
Sbjct: 257 ERRTRNSSLGFGADIKSKRDEN-------VGELLKKIMPEDLLKFGLIPEFIGRLPITVT 309
Query: 371 LSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLR 430
LSAL+ D LV++L EPKNAL +QYKK+F M+NV L F ++AL+ IA++A+ ++TGARGLR
Sbjct: 310 LSALDRDALVEILTEPKNALVKQYKKLFEMDNVHLEFKEEALKAIAEEAIRRSTGARGLR 369
Query: 431 ALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 466
+++E I+ + MFEIP S++ V++++E V +
Sbjct: 370 SIIEEIMKDIMFEIP----SDESISKVIINEETVSN 401
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.136 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 190,242,605
Number of Sequences: 539616
Number of extensions: 8452261
Number of successful extensions: 44626
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1713
Number of HSP's successfully gapped in prelim test: 800
Number of HSP's that attempted gapping in prelim test: 37174
Number of HSP's gapped (non-prelim): 4510
length of query: 510
length of database: 191,569,459
effective HSP length: 122
effective length of query: 388
effective length of database: 125,736,307
effective search space: 48785687116
effective search space used: 48785687116
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)