BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038068
(269 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84K34|SIL10_ARATH E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana
GN=At5g37930 PE=2 SV=1
Length = 349
Score = 151 bits (381), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 110/183 (60%), Gaps = 6/183 (3%)
Query: 47 LTITDQDIFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVRNWAIEK 106
+T+ D D+ DCPIC EPL +P+FQC NGHLAC+ CC K++ CP+C+ P VR A+EK
Sbjct: 103 VTLLDPDVLDCPICCEPLKIPIFQCDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAMEK 162
Query: 107 VIELVQVNCKNAEYGCQQKMSFSKKRGHEKTCQHSPLPCPLSDCSFLGCSSQFVRHFMAK 166
VIE +V+C NA+YGC++ S+ + HE+ C +P CP+ DC + G H A+
Sbjct: 163 VIEASRVSCLNAKYGCKESTSYGNRFSHEQVCVFTPCSCPILDCHYTGYYKDLNNHVRAE 222
Query: 167 HNISAVPFKYNSLLNVNLNVNDINIDGKFSVLQEEKNDDVLFILNNNTGSLGNLVSVCCI 226
H + F +N+ L ++L++N K ++LQEE ND + ++ VSV CI
Sbjct: 223 HKDDLISFVWNTRLTISLDLNK-----KTTILQEE-NDGHVIVVQVFRALHAVYVSVSCI 276
Query: 227 ASV 229
A +
Sbjct: 277 APL 279
>sp|Q9FKD9|SINL6_ARATH Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis
thaliana GN=At5g37870 PE=3 SV=1
Length = 281
Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 120/230 (52%), Gaps = 8/230 (3%)
Query: 26 QRKNNGHDEEEDGSCK-NGSEALTITDQDIFDCPICFEPLTVPVFQCVNGHLACSDCCAK 84
Q+++ +DG + + + + +TD DI DCPIC++ L +PVFQC NGHLACS CC K
Sbjct: 13 QKRHCSSISSDDGRKRVDKTRSAMLTDLDILDCPICYQALKIPVFQCGNGHLACSSCCPK 72
Query: 85 IKRNCPTCSSPTVIVRNWAIEKVIELVQVNCKNAEYGCQQKMSFSKKRGHEKTCQHSPLP 144
++ CP C+ P +R A+E+V+E V V C+ A+ GC + + + ++ HEK C SP
Sbjct: 73 LRNKCPACALPVGHIRCRAMERVLESVLVPCRYADLGCTKTIYYGRESTHEKICNFSPCS 132
Query: 145 CPLSDCSFLGCSSQFVRHFMAKHNISAVPFKYNSLLNVNLNVNDINIDGKFSVLQEEKND 204
CP+ C++ G H+ H+ + + +N V+ + I K +++
Sbjct: 133 CPVQGCNYTGSYKDLYEHYDLTHSTGSTAYSFN---GVSYIAAMMFISDKI-LIERVYEK 188
Query: 205 DVLFILNNNTGSLGNLVSVCCIASVRKDL---YYDIVARCVTGTTLKIQS 251
+LF++ G VSV CIA ++ Y ++ G T+ QS
Sbjct: 189 KLLFVVQCFEEPCGVYVSVSCIAPSAPEVGEFSYGLLYTTWEGVTMTYQS 238
>sp|Q9C6H2|SINL3_ARATH E3 ubiquitin-protein ligase SINA-like 3 OS=Arabidopsis thaliana
GN=At1g66630 PE=2 SV=1
Length = 303
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 114/210 (54%), Gaps = 11/210 (5%)
Query: 23 PKRQRKNNGHDEEEDGSCKNGSE---ALTITDQDIFDCPICFEPLTVPVFQCVNGHLACS 79
PKRQR + E G +GSE + T+ + D+ DCPIC+ L P++QC NGH+ACS
Sbjct: 15 PKRQRPVSM---ENVGGTASGSEVARSATLLELDLLDCPICYHKLGAPIYQCDNGHIACS 71
Query: 80 DCCAKIKRNCPTCSSPTVIVRNWAIEKVIELVQVNCKNAEYGCQQKMSF--SKKRGHEKT 137
CC K+K CP CS R+ +EK++E V V+C NA+YGC +K+ + + HE+
Sbjct: 72 SCCKKVKYKCPYCSLRIGFFRSRILEKIVEAVVVSCPNAKYGCTEKIPYDNESESAHERV 131
Query: 138 CQHSPLPCPLSDCSFLGCSSQFVRHFMAKHNISAVPFKYNSLLNVNLNVNDINIDGKFSV 197
C+ + CP +C + G + RH+ A+H FK N L+V + F V
Sbjct: 132 CEFTLCYCPEPECKYTGVYTDLYRHYHAEHKTDHSWFKCGEYNNAWLHVTGEKLS--FLV 189
Query: 198 LQEEKNDDVLFILNNNTGSLGNLVSVCCIA 227
LQE + D L ++ + S G V+V CIA
Sbjct: 190 LQEYE-DGPLVVVQCSMESHGICVTVNCIA 218
>sp|Q9C9M0|SINL4_ARATH E3 ubiquitin-protein ligase SINA-like 4 OS=Arabidopsis thaliana
GN=At1g66650 PE=2 SV=1
Length = 329
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 108/188 (57%), Gaps = 6/188 (3%)
Query: 45 EALTITDQDIFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVRNWAI 104
+++T+ + ++ +CP CF+PL P+FQC NGHLAC CC K+K+ C C P VR A+
Sbjct: 74 KSVTLPNSNVLECPNCFDPLKKPIFQCNNGHLACFLCCIKLKKRCSFCKLPIGDVRCRAM 133
Query: 105 EKVIELVQVNCKNAEYGCQQKMSFSKK-RGHEKTCQHSPLPCPLSDCSFLGCSSQFVRHF 163
EKVI+ V+C NA YGC+Q ++ + + HEK C +P CP+ DC+++G + HF
Sbjct: 134 EKVIKAGLVSCSNAIYGCKQSTTYGNQLQSHEKVCVFAPCSCPIKDCNYIGFYKDLINHF 193
Query: 164 MAKHNISAVPFKYNSLLNVNLNVNDINIDG--KFSVLQEEKNDDVLFILNNNTGSLGNLV 221
A H +S P NS + + +++D K + EEK + LF++ GS G
Sbjct: 194 RATHKVS--PGDINSFVFDRPVIFGLDLDSSDKMVIFVEEKQGN-LFVVQGFIGSHGVYA 250
Query: 222 SVCCIASV 229
+V IA +
Sbjct: 251 TVSHIAPM 258
>sp|Q9FKD7|SINL7_ARATH E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana
GN=At5g37890 PE=2 SV=1
Length = 286
Score = 128 bits (321), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 126/255 (49%), Gaps = 12/255 (4%)
Query: 15 GDGEGPSSPKRQRKNNGHDEEEDGSCKNGSEALTITDQDIFDCPICFEPLTVPVFQCVNG 74
G+G G +S Q++ + K S L D +I DCPIC+E T+P+FQC NG
Sbjct: 11 GEGIGSNSILSQKRQLSSSDAAKRDAKKRSTMLM--DLEILDCPICYEAFTIPIFQCDNG 68
Query: 75 HLACSDCCAKIKRNCPTCSSPTVIVRNWAIEKVIELVQVNCKNAEYGCQQKMSFSKKRGH 134
HLACS CC K+ CP C+SP R A+E V+E + + C NA+ GC++ +S+ K+ H
Sbjct: 69 HLACSSCCPKLNNKCPACTSPVGHNRCRAMESVLESILIPCPNAKLGCKKNVSYGKELTH 128
Query: 135 EKTCQHSPLPCPLSDCSFLGCSSQFVRHFMAKH-NISAV-PFKYNSLLNVNLNVNDINID 192
EK C S CP DC++ H+ H I+ + F + L+V +N++
Sbjct: 129 EKECMFSHCACPALDCNYTSSYKDLYTHYRITHMEINQINTFICDIPLSVRMNIS----- 183
Query: 193 GKFSVLQEEKNDDVLFILNNNTGSLGNLVSVCCIASVRKDL--YYDIVARCVTGTTLKIQ 250
K +++ E + LF + G V+V CIA +L Y ++ V G T+ Q
Sbjct: 184 -KKILIRTEHLTNHLFAVQCFREPYGVYVTVSCIAPSSPELSQYSYALSYTVDGHTVIYQ 242
Query: 251 SSTWSSKVRSDIPSP 265
S ++ +P
Sbjct: 243 SPEVKRVLKLSFQTP 257
>sp|Q9C6H3|SINL2_ARATH E3 ubiquitin-protein ligase SINA-like 2 OS=Arabidopsis thaliana
GN=At1g66620 PE=2 SV=1
Length = 313
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 110/212 (51%), Gaps = 8/212 (3%)
Query: 17 GEGPSSP-KRQRKNNGHDEEEDGSCKNGSEALTITDQDIFDCPICFEPLTVPVFQCVNGH 75
GE +S KRQR + + E+G + + T+ + D+ DCPIC LT P+FQC NGH
Sbjct: 3 GEASTSRRKRQRVPSSVESVENGGGDAVARSGTLFELDLLDCPICCHALTSPIFQCDNGH 62
Query: 76 LACSDCCAKIKRNCPTCSSPTVIVRNWAIEKVIELVQVNCKNAEYGCQQKMSFSKKRGHE 135
+ACS CC K++ CP+C+ P R+ +E+V+E V V C N ++GC +K S+ K+ HE
Sbjct: 63 IACSSCCTKLRNKCPSCALPIGNFRSRIMERVVEAVMVTCPNVKHGCTEKFSYGKELIHE 122
Query: 136 KTCQHSPLPCPLSDCSFLGCSSQFVRHFMAKHNISAVPFKYNSLLNVNLNVNDINIDGKF 195
K C+ + CP +C++ G HF H + +N + N + I K
Sbjct: 123 KDCRFALCYCPAPNCNYSGVYKDLYSHFYVNHYDT-----WNQIGCGNFAGAWLRISEKI 177
Query: 196 SVLQEEKNDDVLFILNNNTGSLGNLVSVCCIA 227
VLQ + L + + G V+V CIA
Sbjct: 178 LVLQYGQGP--LIAVQCFKETQGMYVTVNCIA 207
>sp|Q9FM14|SIL11_ARATH E3 ubiquitin-protein ligase SINA-like 11 OS=Arabidopsis thaliana
GN=At5g62800 PE=2 SV=2
Length = 314
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 118/214 (55%), Gaps = 14/214 (6%)
Query: 21 SSPKRQ--RKNNGHDEEEDGSCKNGSEALTITDQDIFDCPICFEPLTVPVFQCVNGHLAC 78
S P+ Q ++ + H +++ +N + + + D D+ DCP+CFEPLT+P FQC +GH+ C
Sbjct: 6 SHPQNQTSKRKSSHPQKKQ-RMENETRSAKLLDLDVLDCPVCFEPLTIPTFQCDDGHIVC 64
Query: 79 SDCCAKIKRNC--PTCSSPTVIVRNWAIEKVIELVQVNCKNAEYGCQQKMSFSKKRGHEK 136
+ C AK+ C P C P R +A+E+V+E V C+N E+GC + +S+ K HEK
Sbjct: 65 NFCFAKVSNKCPGPGCDLPIGNKRCFAMERVLESAFVPCQNTEFGCTKSVSYEKVSSHEK 124
Query: 137 TCQHSPLPCPLSDCSFLGCSSQFVRHFMAKH--NISAVPFKYN-SLLNVNLNVNDINIDG 193
C +S CP +C++ G + HFM +H N + V K+ S ++V INI
Sbjct: 125 ECNYSQCSCPNLECNYTGSYNIIYGHFMRRHLYNSTIVSSKWGYSTVDV-----LINIKE 179
Query: 194 KFSVLQEEKNDDVLFILNNNTGSLGNLVSVCCIA 227
K SVL E + +LF++ G V+V IA
Sbjct: 180 KVSVLWESR-QKLLFVVQCFKERHGVYVTVRRIA 212
>sp|Q9FKD5|SINL9_ARATH Putative E3 ubiquitin-protein ligase SINA-like 9 OS=Arabidopsis
thaliana GN=At5g37910 PE=3 SV=1
Length = 276
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Query: 15 GDGEGPSSPKRQRKNNGHDEEEDGSCKNGSEALTITDQDIFDCPICFEPLTVPVFQCVNG 74
GDG G KRQR A+ + D DI DCPIC E LT P+FQC NG
Sbjct: 14 GDG-GERVAKRQRS-----------------AIVLLDLDILDCPICCEALTSPIFQCDNG 55
Query: 75 HLACSDCCAKIKRNCPTCSSPTVIVRNWAIEKVIELVQVNCKNAEYGCQQKMSFSKKRGH 134
HLAC CC K+ CP C+ P R+ A+E V+E + + C N +GC + + K+ H
Sbjct: 56 HLACGSCCPKLSNKCPACTLPVGHSRSRAMESVLESILIPCPNVRFGCTKSFFYGKESAH 115
Query: 135 EKTCQHSPLPCPLSDCSFLGCSSQFVRHFMAKHN 168
EK C S CP S C + G H+ H+
Sbjct: 116 EKECIFSQCSCPSSVCDYTGSYKDLYAHYKLTHS 149
>sp|Q7XA77|SINL5_ARATH E3 ubiquitin-protein ligase SINA-like 5 OS=Arabidopsis thaliana
GN=At1g66660 PE=2 SV=2
Length = 328
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 107/196 (54%), Gaps = 1/196 (0%)
Query: 34 EEEDGSCKNGSEALTITDQDIFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCS 93
+E+ GS K+ S+ + + D+ DCP C EPL P++QC NGHLACS CC K+ + C C
Sbjct: 64 DEQSGSPKS-SQPVKLQSSDVLDCPTCCEPLKRPIYQCSNGHLACSSCCQKLNKKCSFCR 122
Query: 94 SPTVIVRNWAIEKVIELVQVNCKNAEYGCQQKMSFSKKRGHEKTCQHSPLPCPLSDCSFL 153
+R A+EKVIE V C NA++GC++ ++ + HEK C+ CP+S+C+++
Sbjct: 123 CNIGDIRCRAMEKVIEASIVPCPNAKHGCKETTTYCNQSSHEKVCKFVRCSCPVSNCNYV 182
Query: 154 GCSSQFVRHFMAKHNISAVPFKYNSLLNVNLNVNDINIDGKFSVLQEEKNDDVLFILNNN 213
S H + ++ + L+ + ++N+ K +V+ +E+ + L ++
Sbjct: 183 SSYSNLKSHACSTAHVWGEDDIHFQLVIDRPRIFNMNLGRKKTVVFKEEKEGDLIVVQAF 242
Query: 214 TGSLGNLVSVCCIASV 229
G G V+V IA +
Sbjct: 243 KGLEGVYVTVNRIAHM 258
>sp|Q9FKD6|SINL8_ARATH E3 ubiquitin-protein ligase SINA-like 8 OS=Arabidopsis thaliana
GN=At5g37900 PE=1 SV=2
Length = 263
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 90/190 (47%), Gaps = 32/190 (16%)
Query: 48 TITDQDIFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVRNWAIEKV 107
T+ D DI DCPIC E LT P+FQC NGHLACS CC K++ CP C +E +
Sbjct: 26 TLLDLDILDCPICCEGLTCPIFQCENGHLACSSCCPKLRNKCPAC----------PMENI 75
Query: 108 IELVQVNCKNAEYGCQQKMSFSKKRGHEKTCQHSPLPCPLSDCSFLGCSSQFVRHFMAKH 167
+E + V C N +GC + + KK HE+ C S CP DC + G H+ H
Sbjct: 76 LESILVTCPNDMFGCTESFLYGKKSTHEEECIFSLCSCPSLDCEYSGRYEDLYDHYKLTH 135
Query: 168 NI----------SAVPFKYNSLLNVNLNVNDINIDGKFSVLQEEKNDDVLFILNNNTGSL 217
S++P+K L++ + + + E+K +LF + S
Sbjct: 136 ISNSYWTTNCFRSSIPYKAPMLISDKIQITRV---------YEKK---ILFAVQCFRESC 183
Query: 218 GNLVSVCCIA 227
G V+V CIA
Sbjct: 184 GVYVTVSCIA 193
>sp|P21461|SINA_DROME E3 ubiquitin-protein ligase sina OS=Drosophila melanogaster GN=sina
PE=1 SV=2
Length = 314
Score = 97.8 bits (242), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 42 NGSEALTITDQDIFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVRN 101
G ++ +F+CP+CF+ + P+ QC +GHL C C +K+ CPTC P +RN
Sbjct: 58 GGDAGMSADLTSLFECPVCFDYVLPPILQCSSGHLVCVSCRSKLT-CCPTCRGPLANIRN 116
Query: 102 WAIEKVIELVQVNCKNAEYGCQQKMSFSKKRGHEKTCQHSPL--PCPLSDCSFLGCSSQF 159
A+EKV V+ CK++ YGC + +++K HE+TC+ P PCP + C + G
Sbjct: 117 LAMEKVASNVKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLV 176
Query: 160 VRHFMAKH 167
++H M H
Sbjct: 177 MQHLMMSH 184
>sp|P61093|SINA_DROER E3 ubiquitin-protein ligase sina OS=Drosophila erecta GN=sina PE=3
SV=1
Length = 314
Score = 97.8 bits (242), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 42 NGSEALTITDQDIFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVRN 101
G ++ +F+CP+CF+ + P+ QC +GHL C C +K+ CPTC P +RN
Sbjct: 58 GGDAGMSADLTSLFECPVCFDYVLPPILQCSSGHLVCVSCRSKLT-CCPTCRGPLANIRN 116
Query: 102 WAIEKVIELVQVNCKNAEYGCQQKMSFSKKRGHEKTCQHSPL--PCPLSDCSFLGCSSQF 159
A+EKV V+ CK++ YGC + +++K HE+TC+ P PCP + C + G
Sbjct: 117 LAMEKVASNVKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLV 176
Query: 160 VRHFMAKH 167
++H M H
Sbjct: 177 MQHLMMSH 184
>sp|Q8I147|SINA_DROWI E3 ubiquitin-protein ligase sina OS=Drosophila willistoni GN=sina
PE=3 SV=1
Length = 331
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
Query: 54 IFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVRNWAIEKVIELVQV 113
+F+CP+CF+ + P+ QC +GHL C C +K+ CPTC P +RN A+EKV V+
Sbjct: 87 LFECPVCFDYVLPPILQCSSGHLVCVSCRSKLT-CCPTCRGPLANIRNLAMEKVASNVKF 145
Query: 114 NCKNAEYGCQQKMSFSKKRGHEKTCQHSPL--PCPLSDCSFLGCSSQFVRHFMAKH 167
CK++ YGC + +++K HE+TC+ P PCP + C + G ++H M H
Sbjct: 146 PCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMSH 201
>sp|P29304|SINA_DROVI E3 ubiquitin-protein ligase sina OS=Drosophila virilis GN=sina PE=3
SV=1
Length = 314
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Query: 43 GSEALTITDQDIFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVRNW 102
G ++ +F+CP+CF+ + P+ QC +GHL C C +K+ CPTC P +RN
Sbjct: 59 GDAGMSADLTSLFECPVCFDYVLPPILQCSSGHLVCVSCRSKLT-CCPTCRGPLANIRNL 117
Query: 103 AIEKVIELVQVNCKNAEYGCQQKMSFSKKRGHEKTCQHSPL--PCPLSDCSFLGCSSQFV 160
A+E+V V+ CK++ YGC + +++K HE+TC+ P PCP + C + G +
Sbjct: 118 AMEEVASNVKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVM 177
Query: 161 RHFMAKH 167
+H M H
Sbjct: 178 QHLMMSH 184
>sp|Q06985|SIA1B_MOUSE E3 ubiquitin-protein ligase SIAH1B OS=Mus musculus GN=Siah1b PE=2
SV=2
Length = 282
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 9/160 (5%)
Query: 54 IFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVRNWAIEKVIELVQV 113
+F+CP+CF+ + P+ QC +GHL CS+C K+ CPTC P +RN A+EKV V
Sbjct: 38 LFECPVCFDYVLPPILQCQSGHLVCSNCRPKLT-CCPTCRGPLGSIRNLAVEKVANSVLF 96
Query: 114 NCKNAEYGCQQKMSFSKKRGHEKTCQHSPL--PCPLSDCSFLGCSSQFVRHFMAKH-NIS 170
CK + GC+ + +KK HE+ C+ P PCP + C + G + H M +H +I+
Sbjct: 97 PCKYSASGCEITLPHTKKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSIT 156
Query: 171 AVPFKYNSLLNVNLNVNDINIDGKFSVLQEEKNDDVLFIL 210
+ + ++ DIN+ G + + F+L
Sbjct: 157 TLQGE-----DIVFLATDINLPGAVDWVMMQSCFGFHFML 191
>sp|Q8IUQ4|SIAH1_HUMAN E3 ubiquitin-protein ligase SIAH1 OS=Homo sapiens GN=SIAH1 PE=1
SV=2
Length = 282
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 9/160 (5%)
Query: 54 IFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVRNWAIEKVIELVQV 113
+F+CP+CF+ + P+ QC +GHL CS+C K+ CPTC P +RN A+EKV V
Sbjct: 38 LFECPVCFDYVLPPILQCQSGHLVCSNCRPKLT-CCPTCRGPLGSIRNLAMEKVANSVLF 96
Query: 114 NCKNAEYGCQQKMSFSKKRGHEKTCQHSPL--PCPLSDCSFLGCSSQFVRHFMAKH-NIS 170
CK A GC+ + ++K HE+ C+ P PCP + C + G + H M +H +I+
Sbjct: 97 PCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSIT 156
Query: 171 AVPFKYNSLLNVNLNVNDINIDGKFSVLQEEKNDDVLFIL 210
+ + ++ DIN+ G + + F+L
Sbjct: 157 TLQGE-----DIVFLATDINLPGAVDWVMMQSCFGFHFML 191
>sp|Q920M9|SIAH1_RAT E3 ubiquitin-protein ligase SIAH1 OS=Rattus norvegicus GN=Siah1
PE=1 SV=2
Length = 282
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 9/160 (5%)
Query: 54 IFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVRNWAIEKVIELVQV 113
+F+CP+CF+ + P+ QC +GHL CS+C K+ CPTC P +RN A+EKV V
Sbjct: 38 LFECPVCFDYVLPPILQCQSGHLVCSNCRPKLT-CCPTCRGPLGSIRNLAMEKVANSVLF 96
Query: 114 NCKNAEYGCQQKMSFSKKRGHEKTCQHSPL--PCPLSDCSFLGCSSQFVRHFMAKH-NIS 170
CK A GC+ + ++K HE+ C+ P PCP + C + G + H M +H +I+
Sbjct: 97 PCKYASSGCEITLPHTEKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSIT 156
Query: 171 AVPFKYNSLLNVNLNVNDINIDGKFSVLQEEKNDDVLFIL 210
+ + ++ DIN+ G + + F+L
Sbjct: 157 TLQGE-----DIVFLATDINLPGAVDWVMMQSCFGFHFML 191
>sp|P61092|SIA1A_MOUSE E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus GN=Siah1a PE=1
SV=1
Length = 282
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 9/160 (5%)
Query: 54 IFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVRNWAIEKVIELVQV 113
+F+CP+CF+ + P+ QC +GHL CS+C K+ CPTC P +RN A+EKV V
Sbjct: 38 LFECPVCFDYVLPPILQCQSGHLVCSNCRPKLT-CCPTCRGPLGSIRNLAMEKVANSVLF 96
Query: 114 NCKNAEYGCQQKMSFSKKRGHEKTCQHSPL--PCPLSDCSFLGCSSQFVRHFMAKH-NIS 170
CK A GC+ + ++K HE+ C+ P PCP + C + G + H M +H +I+
Sbjct: 97 PCKYASSGCEITLPHTEKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSIT 156
Query: 171 AVPFKYNSLLNVNLNVNDINIDGKFSVLQEEKNDDVLFIL 210
+ + ++ DIN+ G + + F+L
Sbjct: 157 TLQGE-----DIVFLATDINLPGAVDWVMMQSCFGFHFML 191
>sp|Q8T3Y0|SINAL_DROME Probable E3 ubiquitin-protein ligase sinah OS=Drosophila
melanogaster GN=sinah PE=1 SV=2
Length = 351
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 54 IFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVRNWAIEKVIELVQV 113
+ +CP+CF + P+ QC GHL CS C +K+ CP C +R+ A+EKV +
Sbjct: 103 LLECPVCFGYIMPPIMQCPRGHLICSTCRSKLT-ICPVCRVFMTNIRSLAMEKVASKLIF 161
Query: 114 NCKNAEYGCQQKMSFSKKRGHEKTCQHSPLPCPLSD--CSFLGCSSQFVRHFMAKHNISA 171
CK++ +GC+ ++S+++K HE+ C+ P CP D CS+ G +H M+ H +
Sbjct: 162 PCKHSHFGCRARLSYAEKTKHEEDCECRPYFCPYPDDKCSWQGPLRDVYQHLMSSHE-NV 220
Query: 172 VPFKYNSLLNVNLNVNDINIDGKFSVLQEEKNDDVLFILNNNTGSLG----NLVSVCCIA 227
+ + N ++ + NV N++G + F+L+ +LG + C +
Sbjct: 221 ITMEGNDIIFLATNV---NLEGALDWTMVQSCHGRHFLLSLEKINLGEDCQQYFTACRMI 277
Query: 228 SVRKDLYYDIVARCVTGTTLKIQSST--WSSKVRS 260
KD A V +L+ + T W SK RS
Sbjct: 278 GSMKD-----AAEFVYNISLEAYNRTLRWQSKPRS 307
>sp|Q965X6|SIAH1_CAEEL E3 ubiquitin-protein ligase siah-1 OS=Caenorhabditis elegans
GN=siah-1 PE=1 SV=3
Length = 419
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 7/159 (4%)
Query: 54 IFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVRNWAIEKVIELVQV 113
+F+CP+C E + P QC +GHL CS+C K++ CPTC PT VRN +EK+ V+
Sbjct: 153 VFECPVCLEYMLPPYMQCSSGHLVCSNCRPKLQ-CCPTCRGPTPSVRNLGLEKIANTVRF 211
Query: 114 NCKNAEYGCQQKMSFSKKRGHEKTCQHSPL--PCPLSDCSFLGCSSQFVRHFMAKHNISA 171
CK + GC + K HE+ C+ P PCP + C + G S + H H S
Sbjct: 212 PCKFSTSGCPLNFHHADKTEHEELCEFRPYCCPCPGASCKWQGGLSDVMEHLKKIHK-SI 270
Query: 172 VPFKYNSLLNVNLNVNDINIDGKFSVLQEEKNDDVLFIL 210
+ ++ + DIN+ G + + D F+L
Sbjct: 271 TTLQGEDIVFL---ATDINLPGAVDWVMMQSCFDYNFML 306
>sp|Q7ZVG6|SIAH1_DANRE E3 ubiquitin-protein ligase Siah1 OS=Danio rerio GN=siah1 PE=2 SV=2
Length = 282
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 9/160 (5%)
Query: 54 IFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVRNWAIEKVIELVQV 113
+F+CP+CF+ + P+ QC +GHL CS+C K+ CPTC P +RN A+EKV V
Sbjct: 38 LFECPVCFDYVLPPILQCQSGHLVCSNCRPKLT-CCPTCRGPLGSIRNLAMEKVANSVLF 96
Query: 114 NCKNAEYGCQQKMSFSKKRGHEKTCQHSPL--PCPLSDCSFLGCSSQFVRHFMAKH-NIS 170
CK A GC+ + + K HE+ C+ P PCP + C + G + H + +H +I+
Sbjct: 97 PCKYASSGCEVTLPHTDKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLLHQHKSIT 156
Query: 171 AVPFKYNSLLNVNLNVNDINIDGKFSVLQEEKNDDVLFIL 210
+ + ++ DIN+ G + + F+L
Sbjct: 157 TLQGE-----DIVFLATDINLPGAVDWVMMQSCFGFHFML 191
>sp|A8X679|SIAH1_CAEBR E3 ubiquitin-protein ligase siah-1 OS=Caenorhabditis briggsae
GN=siah-1 PE=3 SV=2
Length = 434
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 7/159 (4%)
Query: 54 IFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVRNWAIEKVIELVQV 113
+F+CP+C E + P QC +GHL CS+C K++ CPTC PT VRN +EK+ V+
Sbjct: 168 VFECPVCLEYMLPPYMQCPSGHLVCSNCRPKLQ-CCPTCRGPTPSVRNLGLEKIANTVRF 226
Query: 114 NCKNAEYGCQQKMSFSKKRGHEKTCQHSPL--PCPLSDCSFLGCSSQFVRHFMAKHNISA 171
CK + GC K HE+ C++ P PCP + C + G + + H H S
Sbjct: 227 PCKFSNSGCPLNFHHIDKMDHEELCEYRPYSCPCPGASCKWQGALADVMDHLKKVHK-SI 285
Query: 172 VPFKYNSLLNVNLNVNDINIDGKFSVLQEEKNDDVLFIL 210
+ ++ + DIN+ G + + D F+L
Sbjct: 286 TTLQGEDIVFL---ATDINLPGAVDWVMMQSCFDYNFML 321
>sp|Q86MW9|SINA_SCHMA E3 ubiquitin-protein ligase sina OS=Schistosoma mansoni GN=SINA
PE=1 SV=1
Length = 371
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 3/129 (2%)
Query: 41 KNGSEALTITDQDIFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVR 100
N S++ +I +F+CP+C + P+ QC +GH+ C+ C +K+ +CPTC +R
Sbjct: 110 HNTSDSSSIDLASLFECPVCMDYALPPIMQCQSGHIVCASCRSKLS-SCPTCRGNLDNIR 168
Query: 101 NWAIEKVIELVQVNCKNAEYGCQQKMSFSKKRGHEKTCQHSPL--PCPLSDCSFLGCSSQ 158
N A+EK+ V CK + GC + ++ K HE C++ P PCP + C +LG Q
Sbjct: 169 NLAMEKLASSVLFPCKYSTSGCPETFHYTSKSEHEAACEYRPYDCPCPGASCKWLGELEQ 228
Query: 159 FVRHFMAKH 167
+ H + H
Sbjct: 229 VMPHLVHHH 237
>sp|Q7SYL3|SIAH2_DANRE E3 ubiquitin-protein ligase Siah2 OS=Danio rerio GN=siah2l PE=2
SV=2
Length = 331
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 76/144 (52%), Gaps = 10/144 (6%)
Query: 54 IFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSP-TVIVRNWAIEKVIELVQ 112
+F+CP+CF+ + P+ QC GHL C+ C K+ CPTC P T +RN A+EKV +
Sbjct: 86 LFECPVCFDYVLPPILQCQAGHLVCNQCRQKLS-CCPTCRGPLTPSIRNLAMEKVASTLP 144
Query: 113 VNCKNAEYGCQQKMSFSKKRGHEKTCQHSPL--PCPLSDCSFLGCSSQFVRHFMAKH-NI 169
CK + GC + S+K HE+ C+ P PCP + C + G + + H M H +I
Sbjct: 145 FPCKYSSAGCLLSLHHSEKPEHEEVCEFRPYTCPCPGASCKWQGSLEEVMPHLMHAHKSI 204
Query: 170 SAVPFKYNSLLNVNLNVNDINIDG 193
+ + + ++ DIN+ G
Sbjct: 205 TTLQGE-----DIVFLATDINLPG 223
>sp|Q84JL3|SINA3_ARATH E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana
GN=SINAT3 PE=2 SV=1
Length = 326
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 48 TITDQDIFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVRNWAIEKV 107
T + ++ +CP+C + P+ QC NGH CS C A++ CPTC +R A+EKV
Sbjct: 54 TTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKV 113
Query: 108 IELVQVNCKNAEYGCQQKMSFSKKRGHEKTCQHSPLPCPL--SDCSFLGCSSQFVRHFMA 165
E +++ CK+ GC + + K HE C P CP S+CS G V H
Sbjct: 114 AESLELPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRD 173
Query: 166 KHNI 169
H +
Sbjct: 174 DHKV 177
>sp|Q9I8X5|SIAH2_XENLA E3 ubiquitin-protein ligase siah2 OS=Xenopus laevis GN=siah2 PE=2
SV=1
Length = 313
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 54 IFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTC-SSPTVIVRNWAIEKVIELVQ 112
+F+CP+CF+ + P+ QC GHL C+ C K+ CPTC +S T +RN A+EKV V
Sbjct: 66 LFECPVCFDYVLPPILQCQAGHLVCNQCRQKLS-CCPTCRASLTPSIRNLAMEKVASAVL 124
Query: 113 VNCKNAEYGCQQKMSFSKKRGHEKTCQHSPL--PCPLSDCSFLGCSSQFVRHFMAKH-NI 169
CK A GC + ++K HE C++ P PCP + C + G ++H H +I
Sbjct: 125 FPCKYASTGCSLSLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLENVMQHLTHSHKSI 184
Query: 170 SAVPFKYNSLLNVNLNVNDINIDGK--FSVLQEEKNDDVLFILNNNTGSLGN 219
+ + + ++ DIN+ G + ++Q N + +L G+
Sbjct: 185 TTLQGE-----DIVFLATDINLPGAVDWVMMQYCFNHHFMLVLEKQEKYEGH 231
>sp|Q8R4T2|SIAH2_RAT E3 ubiquitin-protein ligase SIAH2 OS=Rattus norvegicus GN=Siah2
PE=1 SV=2
Length = 325
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 75/144 (52%), Gaps = 10/144 (6%)
Query: 54 IFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTC-SSPTVIVRNWAIEKVIELVQ 112
+F+CP+CF+ + P+ QC GHL C+ C K+ CPTC + T +RN A+EKV V
Sbjct: 78 LFECPVCFDYVLPPILQCQAGHLVCNQCRQKLS-CCPTCRGALTPSIRNLAMEKVASAVL 136
Query: 113 VNCKNAEYGCQQKMSFSKKRGHEKTCQHSPL--PCPLSDCSFLGCSSQFVRHFMAKH-NI 169
CK A GC + ++K HE C++ P PCP + C + G + H M H +I
Sbjct: 137 FPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAHKSI 196
Query: 170 SAVPFKYNSLLNVNLNVNDINIDG 193
+ + + ++ DIN+ G
Sbjct: 197 TTLQGE-----DIVFLATDINLPG 215
>sp|Q06986|SIAH2_MOUSE E3 ubiquitin-protein ligase SIAH2 OS=Mus musculus GN=Siah2 PE=1
SV=2
Length = 325
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 75/144 (52%), Gaps = 10/144 (6%)
Query: 54 IFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTC-SSPTVIVRNWAIEKVIELVQ 112
+F+CP+CF+ + P+ QC GHL C+ C K+ CPTC + T +RN A+EKV V
Sbjct: 78 LFECPVCFDYVLPPILQCQAGHLVCNQCRQKLS-CCPTCRGALTPSIRNLAMEKVASAVL 136
Query: 113 VNCKNAEYGCQQKMSFSKKRGHEKTCQHSPL--PCPLSDCSFLGCSSQFVRHFMAKH-NI 169
CK A GC + ++K HE C++ P PCP + C + G + H M H +I
Sbjct: 137 FPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAHKSI 196
Query: 170 SAVPFKYNSLLNVNLNVNDINIDG 193
+ + + ++ DIN+ G
Sbjct: 197 TTLQGE-----DIVFLATDINLPG 215
>sp|O43255|SIAH2_HUMAN E3 ubiquitin-protein ligase SIAH2 OS=Homo sapiens GN=SIAH2 PE=1
SV=1
Length = 324
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 75/144 (52%), Gaps = 10/144 (6%)
Query: 54 IFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTC-SSPTVIVRNWAIEKVIELVQ 112
+F+CP+CF+ + P+ QC GHL C+ C K+ CPTC + T +RN A+EKV V
Sbjct: 77 LFECPVCFDYVLPPILQCQAGHLVCNQCRQKLS-CCPTCRGALTPSIRNLAMEKVASAVL 135
Query: 113 VNCKNAEYGCQQKMSFSKKRGHEKTCQHSPL--PCPLSDCSFLGCSSQFVRHFMAKH-NI 169
CK A GC + ++K HE C++ P PCP + C + G + H M H +I
Sbjct: 136 FPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAHKSI 195
Query: 170 SAVPFKYNSLLNVNLNVNDINIDG 193
+ + + ++ DIN+ G
Sbjct: 196 TTLQGE-----DIVFLATDINLPG 214
>sp|Q9M2P4|SINA2_ARATH E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana
GN=SINAT2 PE=2 SV=1
Length = 308
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVRNWAIEKVIELVQ 112
++ +CP+C + P+ QC NGH CS+C +++ CPTC +R A+EKV E ++
Sbjct: 56 ELLECPVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLE 115
Query: 113 VNCKNAEYGCQQKMSFSKKRGHEKTCQHSPLPCPL--SDCSFLGCSSQFVRHFMAKHNI 169
V C+ GC + K HE+ C+ P CP S+CS G V H H +
Sbjct: 116 VPCRYQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKV 174
>sp|P93748|SINA1_ARATH Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana
GN=SINAT1 PE=3 SV=1
Length = 305
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVRNWAIEKVIELVQ 112
++ +CP+C + P+ QC NGH CS C +++ CPTC +R A+EKV E ++
Sbjct: 53 ELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKVAESLE 112
Query: 113 VNCKNAEYGCQQKMSFSKKRGHEKTCQHSPLPCPL--SDCSFLGCSSQFVRHFMAKHNI 169
V C+ GCQ + K HE+ C+ CP S+CS G V H H +
Sbjct: 113 VPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLKDDHKV 171
>sp|Q9STN8|SINA4_ARATH E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana
GN=SINAT4 PE=2 SV=1
Length = 327
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVRNWAIEKVIELVQ 112
++ +CP+C + P+ QC NGH CS C ++ CPTC +R A+EKV E ++
Sbjct: 60 ELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLE 119
Query: 113 VNCKNAEYGCQQKMSFSKKRGHEKTCQHSPLPCPL--SDCSFLGCSSQFVRHFMAKHNI 169
+ CK GC + + K HE C P CP S+C +G V H H +
Sbjct: 120 LPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDDHKV 178
>sp|Q8S3N1|SINA5_ARATH E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana
GN=SINAT5 PE=1 SV=2
Length = 309
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVRNWAIEKVIELVQ 112
++ +CP+C + P+ QC NGH CS C +++ CPTC +R A+EKV E ++
Sbjct: 42 ELLECPVCTNSMYPPIHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLE 101
Query: 113 VNCKNAEYGCQQKMSFSKKRGHEKTCQHSPLPCPL--SDCSFLGCSSQFVRHFMAKHNI 169
+ CK GC + K HE C P CP S+C+ +G + V H H +
Sbjct: 102 LPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFLVAHLRDDHKV 160
>sp|Q9C6H4|SINL1_ARATH E3 ubiquitin-protein ligase SINA-like 1 OS=Arabidopsis thaliana
GN=At1g66610 PE=2 SV=1
Length = 366
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 3 MAKNSAKAGKRVGDGEGPSSPKRQR-----KNNGHDEEEDGSCKNGSEALTITDQDIFDC 57
M K + + S PKRQR + G + D ++G T+ + D+ DC
Sbjct: 1 MVKGTNAEQALAREEASSSRPKRQRVPSIVEEEGENGGGDVVVRSG----TLFELDLLDC 56
Query: 58 PICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVRNWAIEKVIELVQVNC 115
PIC LT+P+FQC GH+ACS CC + CP CS R+ +E+V+E V C
Sbjct: 57 PICCNALTIPIFQCDKGHIACSSCCTNVSNKCPYCSLAIGNYRSRIMERVVEAFIVRC 114
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 80/213 (37%), Gaps = 47/213 (22%)
Query: 17 GEGPSSPKRQRKNNGHDEE--EDGSCKNGSEALTITDQDIFDCPICFEPLTVPVFQCVNG 74
GE SS +++ + DEE E+G + T++ D+ DCP+C + L + +FQ
Sbjct: 119 GEASSSRQKRLRVPSIDEENGENGGRDVVVPSGTLSQLDLLDCPVCSKALKISIFQ---- 174
Query: 75 HLACSDCCAKIKRNCPTCSSPTVIVRNWAIEKVIELVQVNCKNAEYGCQQKMSFSKKRGH 134
++ + K + GC + S+ + H
Sbjct: 175 -------------------------QSLFLAK-----------RQNGCTETFSYGNELVH 198
Query: 135 EKTCQHSPLPCPLSDCSFLGCSSQFVRHFMAKHNISAVPFKYNSLLNVNLNVNDINIDGK 194
EK C + CP +C++ G H+ A H F ++V + + + K
Sbjct: 199 EKKCSFALCYCPAPNCNYAGVYKDLYSHYAANHKKLWTRFSCGYSMHVCM-----DFESK 253
Query: 195 FSVLQEEKNDDVLFILNNNTGSLGNLVSVCCIA 227
VLQ+ + ++ + G +V CIA
Sbjct: 254 SLVLQQYSDGPLVVLQCFKEPPQGLFWTVNCIA 286
>sp|Q557K0|Y3509_DICDI TNF receptor-associated factor family protein
DDB_G0273433/DDB_G0273509 OS=Dictyostelium discoideum
GN=DDB_G0273433 PE=3 SV=1
Length = 450
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 29/137 (21%)
Query: 55 FDCPICF--------EPLTVPVFQCVNGHLACSDCCAK---IKRNCPTC---SSPTVIVR 100
F C ICF E L+ V QC NGH++C +C + IK+ CP+C + P+ + R
Sbjct: 24 FQCQICFNSVIDFKKETLSFDVLQCRNGHISCHECWNRQLSIKQECPSCKVKTLPSELSR 83
Query: 101 NWAIEKVIELVQVNCKNA-------------EYGCQQKMSFSKKRGHEKTCQHSPLPCP- 146
N +E ++V C N E GC + + H K CQ+ + CP
Sbjct: 84 NIFLENAFRALKVICPNKFKESKFQGEAVHCENGCPEILKVELLEHHLKECQYQFIKCPN 143
Query: 147 -LSDCSFLGCSSQFVRH 162
+ C ++ +Q H
Sbjct: 144 NSNKCKYIIRKNQIEHH 160
>sp|Q55GA8|Y7744_DICDI TNF receptor-associated factor family protein DDB_G0267744
OS=Dictyostelium discoideum GN=DDB_G0267744 PE=3 SV=1
Length = 429
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 18/111 (16%)
Query: 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAK---IKRNCPTC----SSPTVIVRNWAIE 105
D F C IC L V ++QCV GH AC +C K +K+ C TC S + +N +E
Sbjct: 18 DDFICVIC-SHLQVDIYQCVEGHFACKNCFLKMIELKKQCMTCRCEIKSIESLSKNRYLE 76
Query: 106 KVIELVQVNCKNA----------EYGCQQKMSFSKKRGHEKTCQHSPLPCP 146
K + + + C N+ E C+ ++ H K C+ + CP
Sbjct: 77 KEVRKLNIYCPNSFSDLKNSIKDENACKDIITIEGLETHLKNCKFTLKECP 127
>sp|Q6J2U6|RN114_RAT RING finger protein 114 OS=Rattus norvegicus GN=Rnf114 PE=2 SV=1
Length = 229
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 31 GHDEEEDGSCKNGSEALTITDQDIFDCPICFEPLTVPVFQCVNGHLACSDC---CAKIKR 87
E DG+ ++ A F CP+C E PV Q GH+ CS C C K K+
Sbjct: 4 AQPESRDGAAQSAKPASETDPLSRFTCPVCLEVFEKPV-QVPCGHVFCSACLQECLKPKK 62
Query: 88 N-CPTCSSPTVI-VRNWAIEKVIELVQVNCKNAEYGCQQKMSFSKKRGHEKTC 138
C C S VR +E+ IE ++ +C +GC++ SK R H +C
Sbjct: 63 PVCGVCRSALAPGVRAAELERQIESIETSC----HGCRKDFVLSKIRAHVASC 111
>sp|Q9ET26|RN114_MOUSE RING finger protein 114 OS=Mus musculus GN=Rnf114 PE=2 SV=2
Length = 229
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 31 GHDEEEDGSCKNGSEALTITDQDIFDCPICFEPLTVPVFQCVNGHLACSDC---CAKIKR 87
E DG+ ++ A F CP+C E PV Q GH+ CS C C K K+
Sbjct: 4 AQPESRDGAAQSAKPASETDPLSRFTCPVCLEVFEKPV-QVPCGHVFCSACLQECLKPKK 62
Query: 88 N-CPTCSSPTVI-VRNWAIEKVIELVQVNCKNAEYGCQQKMSFSKKRGHEKTC 138
C C S VR +E+ IE ++ +C +GC++ SK R H +C
Sbjct: 63 PVCGVCRSALAPGVRAVELERQIESIETSC----HGCRKNFILSKIRAHVTSC 111
>sp|Q54FB9|Y0971_DICDI TNF receptor-associated factor family protein DDB_G0290971
OS=Dictyostelium discoideum GN=DDB_G0290971 PE=3 SV=1
Length = 445
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 54/144 (37%), Gaps = 34/144 (23%)
Query: 53 DIFDCPICFEPLTV-----PVFQCVNGHLACSDCCAKI---KRNCPTCSSPT----VIVR 100
D F CPICF+ VFQC +GHLAC C + K+ C C +P + R
Sbjct: 19 DNFTCPICFDLYYSSSSKKEVFQCRDGHLACKSCWSDSLLNKKECMICRTPVNSMNELSR 78
Query: 101 NWAIEKVIELVQVNCKNAEY----------------------GCQQKMSFSKKRGHEKTC 138
N IE +V C N+ + GC++ ++ H+ C
Sbjct: 79 NRFIENEFLKKKVYCPNSFFFIENVNVDDSSMNEALIRDESNGCKEIITVEALEKHQVEC 138
Query: 139 QHSPLPCPLSDCSFLGCSSQFVRH 162
Q CP + C + Q H
Sbjct: 139 QFRFEKCPFTGCDKILRLKQIAEH 162
>sp|Q2KHN1|RN151_HUMAN RING finger protein 151 OS=Homo sapiens GN=RNF151 PE=2 SV=1
Length = 245
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 14/120 (11%)
Query: 55 FDCPICFEPLTVPV-FQCVNGHLACSDCCAKI---KRNCPTCSSPTV---IVRNWAIEKV 107
F C +C L P C H+ C C + ++ CP C +V + K
Sbjct: 18 FVCSVCHGVLKRPARLPC--SHIFCKKCILRWLARQKTCPCCRKEVKRKKVVHMNKLRKT 75
Query: 108 IELVQVNCKNAEYGCQQKMSFSKKRGHEKTCQHSPLPCPLSDCSFLGCSSQFVRHFMAKH 167
I ++V CKNA+ GC + ++GH+ +C P L+ C GC+SQ R +A+H
Sbjct: 76 IGRLEVKCKNADAGCIVTCPLAHRKGHQDSC-----PFELTACPNEGCTSQVPRGTLAEH 130
>sp|Q54NN4|Y8514_DICDI TNF receptor-associated factor family protein DDB_G0285149
OS=Dictyostelium discoideum GN=DDB_G0285149 PE=3 SV=1
Length = 427
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 34/153 (22%)
Query: 55 FDCPICFEPLT-----VPVFQCVNGHLACSDCCAKI----KRNCPTCSSPT---VIVRNW 102
F C +C + L+ + V QC +GH CSDC K K+ CP C + + RN
Sbjct: 18 FSCIVCTDLLSESHDKIQVNQCPHGHCLCSDCWTKQIENKKKECPICRAKVKLEFLSRNL 77
Query: 103 AIEKVIELVQVNCK--------------NAEYGCQQKMSFSKKRGHEKTCQHSPLPCPLS 148
+E + +V CK + E GC+ + + H K CQ++ + CP
Sbjct: 78 FLESEFKKKKVYCKYQYKEEKEDGKIIKDEENGCKDIIRIEEMETHFKNCQYAFINCPNG 137
Query: 149 D-CSFLGCSSQFVRHFMAKHNIS----AVPFKY 176
D C +S+F ++ + +HN S VP +Y
Sbjct: 138 DECKI---NSRFRKNQLEEHNKSCEYLKVPCQY 167
>sp|Q2TBT8|RN151_BOVIN RING finger protein 151 OS=Bos taurus GN=RNF151 PE=2 SV=1
Length = 240
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 55 FDCPICFEPLTVPV-FQCVNGHLACSDCCAKI---KRNCPTCSSPTV---IVRNWAIEKV 107
F C +C L PV C H+ C C + ++ CP C +V ++K+
Sbjct: 18 FLCSVCHGVLKRPVRLPC--SHIFCKKCILRWLARQKTCPCCRKEVRHRKMVHVNKLQKI 75
Query: 108 IELVQVNCKNAEYGCQQKMSFSKKRGHEKTCQHSPLPCPLSDCSF 152
I ++V C+NAE GCQ + ++GH+ +C + CP C
Sbjct: 76 IGRLEVKCRNAEAGCQVTCPLAHRKGHQDSCPFELMVCPNEGCML 120
>sp|Q2TAD9|CYR1B_XENLA Cysteine and histidine-rich protein 1-B OS=Xenopus laevis
GN=cyhr1-b PE=2 SV=2
Length = 365
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 74/193 (38%), Gaps = 41/193 (21%)
Query: 3 MAKNSAKAGKRVGDGEGPSSPKRQR------------KNNGHDEEEDGSCKNGSEALTIT 50
+A +SA G VG E P R K E E GS + L
Sbjct: 11 LASSSAGLGAEVGQEEVPGGAGPARLLLLPSDSDGPPKKRLRSEAEPGSVR-----LEER 65
Query: 51 DQDIFDCPICFEPLTVPVFQCVNGHLACSDCC------AKIKR---NCPTCS---SPTVI 98
+ C +C + V+QC NGHL C+ C A++K CP C S ++
Sbjct: 66 LYSVLCCAVCLDLPKASVYQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLC 125
Query: 99 VRNWAIEKVIELVQVNCKNAEYGCQQKMSFSKKRGHEK-TCQHSPLPCPLSDCSF--LGC 155
RN A+EK I + +C C ++ S H+K CQ ++ C + +GC
Sbjct: 126 CRNLAVEKAISELPSDCG----FCLKQFPRSLLERHKKEECQDR-----VTQCKYKRIGC 176
Query: 156 SSQFVRHFMAKHN 168
Q H + H
Sbjct: 177 PWQGPYHELTVHE 189
>sp|Q6J212|RN114_PANTR RING finger protein 114 OS=Pan troglodytes GN=RNF114 PE=2 SV=1
Length = 228
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 55 FDCPICFEPLTVPVFQCVNGHLACSDC---CAKIKRN-CPTCSSPTVI-VRNWAIEKVIE 109
F CP+C E PV Q GH+ CS C C K K+ C C S VR +E+ IE
Sbjct: 27 FTCPVCLEVYEKPV-QVPCGHVFCSACLQECLKPKKPVCGVCRSALAPGVRAVELERQIE 85
Query: 110 LVQVNCKNAEYGCQQKMSFSKKRGHEKTC 138
+ +C +GC++K SK R H TC
Sbjct: 86 STETSC----HGCRKKFFLSKIRSHVATC 110
>sp|Q4U5R4|RN114_BOVIN RING finger protein 114 OS=Bos taurus GN=RNF114 PE=2 SV=1
Length = 230
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Query: 37 DGSCKNGSEALTITDQDIFDCPICFEPLTVPVFQCVNGHLACSDC---CAKIKRN-CPTC 92
DG + A F CP+C E PV Q GH+ CS C C K K+ C C
Sbjct: 11 DGGAQLAGPAAEADPLGRFTCPVCLEVYEKPV-QVPCGHVFCSACLQECLKPKKPVCGVC 69
Query: 93 SSPTVI-VRNWAIEKVIELVQVNCKNAEYGCQQKMSFSKKRGHEKTC 138
S VR +E+ IE + +C +GC++ SK R H TC
Sbjct: 70 RSALAPGVRAVELERQIESTETSC----HGCRKNFFLSKIRAHVATC 112
>sp|Q55GA0|Y7754_DICDI TNF receptor-associated factor family protein DDB_G0267754
OS=Dictyostelium discoideum GN=DDB_G0267754 PE=3 SV=1
Length = 462
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI---KRNCPTC----SSPTVIVRNWAIE 105
D + C +C E L + QC NGH+AC +C KI K+ C TC S + +N +E
Sbjct: 20 DDYTCCVC-ECLLIEALQCRNGHVACKNCFIKIVKSKKECMTCRCEIKSIESLSKNRYLE 78
Query: 106 KVIELVQVNCKNA 118
K I + +NC N+
Sbjct: 79 KEIRKLNINCPNS 91
>sp|Q6J1I8|RN114_PIG RING finger protein 114 OS=Sus scrofa GN=RNF114 PE=2 SV=1
Length = 228
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 10/110 (9%)
Query: 34 EEEDGSCKNGSEALTITDQDIFDCPICFEPLTVPVFQCVNGHLACSDC---CAKIKRN-C 89
++ +G + A F CP+C E PV Q GH+ CS C C K K+ C
Sbjct: 6 QDREGGAQLAGPAAEADPLGRFTCPVCLEVYEKPV-QVPCGHVFCSACLQECLKPKKPVC 64
Query: 90 PTCSSPTVI-VRNWAIEKVIELVQVNCKNAEYGCQQKMSFSKKRGHEKTC 138
C S VR +E+ IE + +C +GC++ SK R H TC
Sbjct: 65 GVCRSTLAPGVRAVELERQIESTETSC----HGCRKNFFLSKIRAHVATC 110
>sp|Q54FC5|Y0965_DICDI TNF receptor-associated factor family protein DDB_G0290965
OS=Dictyostelium discoideum GN=DDB_G0290965 PE=3 SV=1
Length = 575
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 48 TITDQDIFDCPICFEPL-TVPVFQCVNGHLACSDCCA---KIKRNCPTCSSPT 96
++ ++ + CPICFE + +FQC +GH AC +C KIK+ C C S
Sbjct: 18 SLQKKNKYSCPICFEFIYKKSIFQCKSGHFACKECWEKSLKIKKECMICRSKV 70
>sp|Q55A66|Y2098_DICDI TNF receptor-associated factor family protein DDB_G0272098
OS=Dictyostelium discoideum GN=DDB_G0272098 PE=3 SV=1
Length = 1084
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 46/121 (38%), Gaps = 30/121 (24%)
Query: 55 FDCPIC-------FEPLTVPVFQCVNGHLACSDCCA---KIKRNCPTCSSPTVIVR---- 100
+ CP C F P QC NGH C C K+++NC C P ++
Sbjct: 19 YYCPDCGELLINNFNPEKFKALQCKNGHTKCLQCWEQHLKLRKNCLQCKVPVSSIKDLSL 78
Query: 101 NWAIEKVIELVQVNCKNAEY-----------GCQQKMSFSKKRGHEKTCQHSPLPCPLSD 149
N I + I +V CKN Y GC++ + + H K C P +D
Sbjct: 79 NLYIAQKISANKVYCKNRYYETKNFTIDEENGCKEIIRVDEYEKHIKEC-----PLTYTD 133
Query: 150 C 150
C
Sbjct: 134 C 134
>sp|Q9Y508|RN114_HUMAN RING finger protein 114 OS=Homo sapiens GN=RNF114 PE=1 SV=1
Length = 228
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 55 FDCPICFEPLTVPVFQCVNGHLACSDC---CAKIKRN-CPTCSSPTVI-VRNWAIEKVIE 109
F CP+C E PV Q GH+ CS C C K K+ C C S VR +E+ IE
Sbjct: 27 FTCPVCLEVYEKPV-QVPCGHVFCSACLQECLKPKKPVCGVCRSALAPGVRAVELERQIE 85
Query: 110 LVQVNCKNAEYGCQQKMSFSKKRGHEKTC 138
+ +C +GC++ SK R H TC
Sbjct: 86 STETSC----HGCRKNFFLSKIRSHVATC 110
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,821,865
Number of Sequences: 539616
Number of extensions: 4368239
Number of successful extensions: 12364
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 140
Number of HSP's that attempted gapping in prelim test: 12159
Number of HSP's gapped (non-prelim): 259
length of query: 269
length of database: 191,569,459
effective HSP length: 115
effective length of query: 154
effective length of database: 129,513,619
effective search space: 19945097326
effective search space used: 19945097326
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)