Query 038068
Match_columns 269
No_of_seqs 271 out of 1889
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 12:08:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038068.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038068hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a25_A Ubiquitin ligase SIAH1; 100.0 4.3E-29 1.5E-33 208.8 8.9 158 107-269 1-168 (193)
2 3hcs_A TNF receptor-associated 99.9 1.5E-24 5E-29 177.9 9.8 132 43-179 6-145 (170)
3 3hct_A TNF receptor-associated 99.7 4.4E-18 1.5E-22 131.0 7.2 86 53-141 17-109 (118)
4 3knv_A TNF receptor-associated 99.7 4.9E-18 1.7E-22 134.8 1.4 86 52-140 29-131 (141)
5 1rmd_A RAG1; V(D)J recombinati 99.7 3.5E-17 1.2E-21 125.5 4.9 86 53-141 22-115 (116)
6 1t1h_A Gspef-atpub14, armadill 99.1 2.6E-11 8.9E-16 85.8 3.8 60 52-112 6-72 (78)
7 3ztg_A E3 ubiquitin-protein li 99.1 3.7E-11 1.3E-15 87.8 4.5 64 53-117 12-85 (92)
8 2kr4_A Ubiquitin conjugation f 99.0 1.4E-10 4.7E-15 83.7 4.7 60 52-112 12-77 (85)
9 1wgm_A Ubiquitin conjugation f 99.0 2.2E-10 7.4E-15 84.9 5.8 63 51-114 19-88 (98)
10 2djb_A Polycomb group ring fin 99.0 2.2E-10 7.6E-15 79.8 4.9 46 53-98 14-62 (72)
11 2y43_A E3 ubiquitin-protein li 99.0 1E-10 3.6E-15 86.6 2.8 61 53-113 21-87 (99)
12 2csy_A Zinc finger protein 183 99.0 3.8E-10 1.3E-14 80.4 5.4 56 53-109 14-74 (81)
13 3lrq_A E3 ubiquitin-protein li 99.0 1.3E-10 4.6E-15 86.3 3.0 57 53-109 21-84 (100)
14 2egp_A Tripartite motif-contai 99.0 9.5E-11 3.2E-15 82.9 1.7 44 53-97 11-64 (79)
15 2kre_A Ubiquitin conjugation f 99.0 2.8E-10 9.7E-15 84.6 3.9 60 52-112 27-92 (100)
16 2ckl_A Polycomb group ring fin 99.0 3E-10 1E-14 85.5 3.9 60 53-112 14-83 (108)
17 4ayc_A E3 ubiquitin-protein li 99.0 2.2E-10 7.7E-15 90.1 3.1 45 53-98 52-99 (138)
18 3fl2_A E3 ubiquitin-protein li 99.0 2.4E-10 8.3E-15 88.1 3.2 58 53-111 51-116 (124)
19 1jm7_B BARD1, BRCA1-associated 98.9 3E-10 1E-14 86.8 3.1 60 53-112 21-84 (117)
20 2ecy_A TNF receptor-associated 98.9 6.9E-10 2.4E-14 75.9 4.1 44 53-97 14-61 (66)
21 2ecv_A Tripartite motif-contai 98.9 4.6E-10 1.6E-14 80.2 3.2 54 53-107 18-83 (85)
22 1bor_A Transcription factor PM 98.9 5E-10 1.7E-14 74.2 3.1 45 52-97 4-48 (56)
23 2yur_A Retinoblastoma-binding 98.9 9.9E-10 3.4E-14 76.9 4.8 44 53-97 14-63 (74)
24 2ecw_A Tripartite motif-contai 98.9 4E-10 1.4E-14 80.6 2.7 54 53-107 18-83 (85)
25 1z6u_A NP95-like ring finger p 98.9 4.6E-10 1.6E-14 89.6 3.2 59 53-112 77-143 (150)
26 2d8t_A Dactylidin, ring finger 98.9 1.2E-09 4.1E-14 75.8 4.5 44 53-97 14-60 (71)
27 2ckl_B Ubiquitin ligase protei 98.9 7E-10 2.4E-14 89.8 3.3 61 53-113 53-121 (165)
28 2ysl_A Tripartite motif-contai 98.9 2.7E-09 9.1E-14 74.2 5.4 44 53-97 19-68 (73)
29 2yu4_A E3 SUMO-protein ligase 98.8 1.8E-09 6.3E-14 79.2 3.6 61 52-112 5-80 (94)
30 2ea6_A Ring finger protein 4; 98.8 2.2E-09 7.7E-14 73.6 3.1 44 53-97 14-67 (69)
31 2c2l_A CHIP, carboxy terminus 98.8 2.9E-09 1E-13 92.7 4.6 62 51-113 205-273 (281)
32 2ysj_A Tripartite motif-contai 98.8 7.1E-09 2.4E-13 70.0 5.3 39 53-92 19-63 (63)
33 3l11_A E3 ubiquitin-protein li 98.8 2.2E-09 7.5E-14 81.6 2.8 44 53-97 14-61 (115)
34 1jm7_A BRCA1, breast cancer ty 98.8 1.6E-09 5.6E-14 81.7 1.5 44 53-97 20-69 (112)
35 3ng2_A RNF4, snurf, ring finge 98.8 2.4E-09 8.1E-14 74.0 2.1 47 52-98 8-63 (71)
36 1chc_A Equine herpes virus-1 r 98.7 8.7E-09 3E-13 70.6 4.7 45 53-97 4-51 (68)
37 2ct2_A Tripartite motif protei 98.7 6.3E-09 2.2E-13 74.9 4.0 44 53-97 14-67 (88)
38 1g25_A CDK-activating kinase a 98.7 2.7E-09 9.1E-14 72.7 1.8 45 53-97 2-54 (65)
39 2ecj_A Tripartite motif-contai 98.7 9E-09 3.1E-13 68.1 4.0 39 53-92 14-58 (58)
40 2f42_A STIP1 homology and U-bo 98.7 8.8E-09 3E-13 84.2 4.1 62 51-113 103-171 (179)
41 2xeu_A Ring finger protein 4; 98.7 3.3E-09 1.1E-13 71.6 1.3 46 53-98 2-56 (64)
42 2ect_A Ring finger protein 126 98.7 2.7E-08 9.4E-13 70.0 5.1 46 53-98 14-64 (78)
43 1iym_A EL5; ring-H2 finger, ub 98.6 2.2E-08 7.4E-13 65.6 4.2 45 53-97 4-54 (55)
44 2ecm_A Ring finger and CHY zin 98.6 2.6E-08 9E-13 65.1 4.4 45 53-97 4-54 (55)
45 4ic3_A E3 ubiquitin-protein li 98.6 1E-08 3.5E-13 71.7 2.4 44 53-98 23-67 (74)
46 2ep4_A Ring finger protein 24; 98.6 2.5E-08 8.4E-13 69.5 4.1 46 53-98 14-64 (74)
47 1e4u_A Transcriptional repress 98.6 1.7E-08 5.7E-13 71.5 3.0 45 53-97 10-61 (78)
48 2ecn_A Ring finger protein 141 98.6 1.1E-08 3.9E-13 70.5 1.8 43 53-97 14-59 (70)
49 2kiz_A E3 ubiquitin-protein li 98.6 3.5E-08 1.2E-12 67.8 4.1 46 53-98 13-63 (69)
50 1x4j_A Ring finger protein 38; 98.6 3.4E-08 1.2E-12 69.0 3.6 46 53-98 22-72 (75)
51 2l0b_A E3 ubiquitin-protein li 98.6 2.3E-08 7.9E-13 72.8 2.8 44 53-97 39-88 (91)
52 3htk_C E3 SUMO-protein ligase 98.6 2.7E-08 9.2E-13 85.4 3.4 60 52-111 179-248 (267)
53 2ecg_A Baculoviral IAP repeat- 98.5 2.5E-08 8.5E-13 69.9 1.8 44 53-98 24-68 (75)
54 2ea5_A Cell growth regulator w 98.5 1.1E-07 3.8E-12 65.3 4.4 44 53-98 14-58 (68)
55 4ap4_A E3 ubiquitin ligase RNF 98.5 4.3E-08 1.5E-12 75.7 1.8 45 53-98 6-60 (133)
56 2ecl_A Ring-box protein 2; RNF 98.4 2E-07 7E-12 66.2 4.8 46 52-97 13-75 (81)
57 2yho_A E3 ubiquitin-protein li 98.4 1.4E-07 4.8E-12 66.8 2.5 44 53-98 17-61 (79)
58 1v87_A Deltex protein 2; ring- 98.3 3E-07 1E-11 69.4 3.6 45 53-97 24-93 (114)
59 2vje_A E3 ubiquitin-protein li 98.2 4.1E-07 1.4E-11 61.6 2.6 45 53-97 7-56 (64)
60 4ap4_A E3 ubiquitin ligase RNF 98.2 5.6E-07 1.9E-11 69.3 2.8 47 51-98 69-125 (133)
61 2y1n_A E3 ubiquitin-protein li 98.2 1E-06 3.4E-11 80.1 3.8 45 53-98 331-379 (389)
62 2vje_B MDM4 protein; proto-onc 98.1 8.6E-07 2.9E-11 59.8 2.3 45 53-97 6-55 (63)
63 3t6p_A Baculoviral IAP repeat- 98.1 1.2E-06 4.2E-11 78.8 4.0 44 53-98 294-338 (345)
64 3dpl_R Ring-box protein 1; ubi 98.1 1.9E-06 6.6E-11 64.4 3.8 46 53-98 36-101 (106)
65 2yuc_A TNF receptor-associated 98.0 3.1E-06 1.1E-10 59.1 3.6 60 107-172 11-71 (76)
66 2yre_A F-box only protein 30; 98.0 2.2E-06 7.6E-11 62.6 2.6 51 112-165 37-89 (100)
67 2yre_A F-box only protein 30; 98.0 2.2E-06 7.5E-11 62.6 2.5 59 88-146 39-98 (100)
68 2bay_A PRE-mRNA splicing facto 98.0 2.8E-06 9.5E-11 57.0 2.6 43 54-97 3-49 (61)
69 1wim_A KIAA0161 protein; ring 97.9 2.6E-06 8.7E-11 62.1 1.9 43 53-95 4-61 (94)
70 2yuc_A TNF receptor-associated 97.9 1.8E-06 6.2E-11 60.3 0.7 51 128-179 2-52 (76)
71 4a0k_B E3 ubiquitin-protein li 97.8 3.6E-06 1.2E-10 64.0 0.4 45 53-97 47-111 (117)
72 3vk6_A E3 ubiquitin-protein li 97.8 3.8E-05 1.3E-09 55.9 5.3 82 56-171 3-89 (101)
73 3hcs_A TNF receptor-associated 97.5 4.9E-05 1.7E-09 61.2 3.6 101 56-165 55-158 (170)
74 2d8s_A Cellular modulator of i 97.0 0.00068 2.3E-08 47.7 4.3 44 53-97 14-69 (80)
75 2d9k_A FLN29 gene product; zin 96.9 0.00016 5.4E-09 50.1 0.2 52 109-166 14-65 (75)
76 2ct0_A Non-SMC element 1 homol 96.6 0.0042 1.4E-07 43.0 5.4 44 53-97 14-63 (74)
77 3k1l_B Fancl; UBC, ring, RWD, 95.9 0.0031 1.1E-07 56.1 2.4 45 53-97 307-372 (381)
78 2jun_A Midline-1; B-BOX, TRIM, 95.0 0.012 4E-07 42.8 2.6 32 53-84 2-35 (101)
79 2d9k_A FLN29 gene product; zin 94.1 0.0094 3.2E-07 40.9 0.1 48 129-179 3-51 (75)
80 3hct_A TNF receptor-associated 93.1 0.034 1.2E-06 41.5 1.7 63 103-169 44-109 (118)
81 2eod_A TNF receptor-associated 92.8 0.093 3.2E-06 34.2 3.4 53 111-168 9-62 (66)
82 1rmd_A RAG1; V(D)J recombinati 91.4 0.16 5.4E-06 37.6 3.5 76 87-166 24-112 (116)
83 2cs3_A Protein C14ORF4, MY039 90.5 0.76 2.6E-05 31.7 5.9 33 53-85 14-49 (93)
84 1vyx_A ORF K3, K3RING; zinc-bi 87.2 0.39 1.3E-05 31.3 2.6 44 53-97 5-58 (60)
85 2ct7_A Ring finger protein 31; 86.9 0.85 2.9E-05 31.9 4.5 33 53-85 24-61 (86)
86 2i13_A AART; DNA binding, zinc 86.7 0.61 2.1E-05 36.9 4.1 84 88-177 79-167 (190)
87 2cup_A Skeletal muscle LIM-pro 86.4 0.49 1.7E-05 33.8 3.1 45 53-97 32-77 (101)
88 2yt9_A Zinc finger-containing 86.0 0.57 2E-05 32.3 3.2 54 111-170 34-92 (95)
89 2dlq_A GLI-kruppel family memb 86.0 1.1 3.7E-05 32.3 4.9 108 53-170 6-121 (124)
90 1wfh_A Zinc finger (AN1-like) 85.0 2 6.8E-05 28.4 5.1 41 53-93 14-54 (64)
91 1wfp_A Zinc finger (AN1-like) 83.8 3.7 0.00013 27.9 6.2 42 53-94 24-65 (74)
92 2dlq_A GLI-kruppel family memb 83.7 2 6.8E-05 30.9 5.5 85 87-177 8-100 (124)
93 2gli_A Protein (five-finger GL 83.5 2.7 9.2E-05 31.6 6.4 55 111-167 96-154 (155)
94 2dlk_A Novel protein; ZF-C2H2 83.2 1.2 4.1E-05 29.4 3.7 64 112-177 7-74 (79)
95 2rpc_A Zinc finger protein ZIC 83.0 1.7 5.8E-05 32.9 5.0 114 53-170 24-149 (155)
96 3nw0_A Non-structural maintena 83.0 0.99 3.4E-05 38.0 3.8 44 53-97 179-228 (238)
97 2xqn_T Testin, TESS; metal-bin 82.2 0.99 3.4E-05 33.6 3.3 45 53-97 29-74 (126)
98 2eod_A TNF receptor-associated 82.2 0.77 2.6E-05 29.6 2.3 37 136-175 4-40 (66)
99 3m62_A Ubiquitin conjugation f 82.1 1.1 3.6E-05 45.1 4.2 63 50-113 887-956 (968)
100 1wg2_A Zinc finger (AN1-like) 81.5 2.8 9.4E-05 27.7 4.7 42 53-94 14-55 (64)
101 1wfl_A Zinc finger protein 216 81.4 2.9 0.0001 28.4 5.0 40 53-92 24-63 (74)
102 3knv_A TNF receptor-associated 81.0 0.49 1.7E-05 36.4 1.1 26 140-165 102-128 (141)
103 2j7j_A Transcription factor II 80.9 1.4 4.8E-05 29.3 3.4 74 90-167 7-85 (85)
104 1z60_A TFIIH basal transcripti 80.4 1.1 3.8E-05 29.2 2.5 38 55-92 16-58 (59)
105 1wjp_A Zinc finger protein 295 80.3 1.2 4E-05 31.6 3.0 38 130-169 57-95 (107)
106 2dmd_A Zinc finger protein 64, 80.0 2.8 9.6E-05 28.6 4.9 52 112-169 36-90 (96)
107 2jne_A Hypothetical protein YF 78.7 0.48 1.6E-05 34.0 0.3 38 55-97 33-72 (101)
108 2gli_A Protein (five-finger GL 78.6 2.4 8.4E-05 31.9 4.5 59 109-169 64-125 (155)
109 1zw8_A Zinc-responsive transcr 78.5 2.4 8.4E-05 27.7 3.9 52 114-167 3-64 (64)
110 2wbs_A Krueppel-like factor 4; 78.5 2.4 8.2E-05 28.5 4.1 24 142-165 35-59 (89)
111 1m3v_A FLIN4, fusion of the LI 76.1 1.7 6E-05 32.2 2.9 45 53-98 31-81 (122)
112 1z2q_A LM5-1; membrane protein 75.9 3.1 0.00011 28.9 4.0 36 50-85 17-55 (84)
113 1iml_A CRIP, cysteine rich int 75.9 2.3 7.9E-05 28.4 3.3 44 53-96 26-71 (76)
114 2ebt_A Krueppel-like factor 5; 75.0 3.9 0.00013 28.1 4.4 51 111-165 44-97 (100)
115 2jmo_A Parkin; IBR, E3 ligase, 73.7 1.5 5.1E-05 30.2 1.8 40 53-94 24-75 (80)
116 2ee8_A Protein ODD-skipped-rel 72.7 6.3 0.00021 27.4 5.1 38 130-169 60-99 (106)
117 2ko5_A Ring finger protein Z; 71.8 1.9 6.5E-05 30.7 2.0 43 53-97 27-72 (99)
118 1x4u_A Zinc finger, FYVE domai 71.6 4.1 0.00014 28.2 3.7 35 50-84 10-47 (84)
119 2jtn_A LIM domain-binding prot 71.0 3.3 0.00011 32.9 3.5 44 53-97 86-130 (182)
120 1joc_A EEA1, early endosomal a 70.9 2.4 8.4E-05 31.8 2.6 33 53-85 68-103 (125)
121 2kmk_A Zinc finger protein GFI 70.7 4.2 0.00014 26.7 3.6 74 88-167 3-81 (82)
122 2yw8_A RUN and FYVE domain-con 70.3 3.5 0.00012 28.4 3.1 36 50-85 15-53 (82)
123 2rgt_A Fusion of LIM/homeobox 70.0 3.7 0.00013 32.2 3.6 44 53-97 32-76 (169)
124 2rpc_A Zinc finger protein ZIC 69.8 6 0.0002 29.7 4.7 55 122-176 68-125 (155)
125 2drp_A Protein (tramtrack DNA- 69.4 5.2 0.00018 25.1 3.7 51 112-168 10-65 (66)
126 2dmi_A Teashirt homolog 3; zin 69.0 4.9 0.00017 28.5 3.9 40 129-170 66-107 (115)
127 2epa_A Krueppel-like factor 10 68.8 4.9 0.00017 25.9 3.5 51 112-164 17-70 (72)
128 2adr_A ADR1; transcription reg 68.2 7.2 0.00025 23.9 4.1 47 122-170 8-57 (60)
129 1wff_A Riken cDNA 2810002D23 p 67.9 12 0.00043 26.0 5.5 41 53-94 24-66 (85)
130 3i2d_A E3 SUMO-protein ligase 67.6 4.4 0.00015 36.2 3.9 58 54-111 249-316 (371)
131 1ubd_C Protein (YY1 zinc finge 67.6 8.6 0.00029 27.5 5.0 80 87-168 35-119 (124)
132 2xjy_A Rhombotin-2; oncoprotei 67.3 3 0.0001 31.0 2.5 44 53-97 28-77 (131)
133 2jrp_A Putative cytoplasmic pr 66.4 2 6.7E-05 29.8 1.1 38 55-97 3-42 (81)
134 1x68_A FHL5 protein; four-and- 64.5 4.7 0.00016 26.9 2.8 39 53-91 34-73 (76)
135 3t7l_A Zinc finger FYVE domain 63.9 6.3 0.00021 27.7 3.4 33 53-85 19-54 (90)
136 2d8z_A Four and A half LIM dom 63.6 5.1 0.00017 26.1 2.8 33 53-85 30-62 (70)
137 4fo9_A E3 SUMO-protein ligase 63.3 6.5 0.00022 35.0 4.1 57 54-110 215-281 (360)
138 1x3c_A Zinc finger protein 292 62.7 5.6 0.00019 26.9 2.7 29 141-169 26-55 (73)
139 2ctd_A Zinc finger protein 512 62.1 6.3 0.00022 27.6 3.2 57 107-169 29-88 (96)
140 1wfe_A Riken cDNA 2310008M20 p 61.9 14 0.00049 25.7 4.9 38 53-91 24-64 (86)
141 2ct1_A Transcriptional repress 61.7 7.7 0.00026 25.3 3.5 53 112-170 15-72 (77)
142 1x61_A Thyroid receptor intera 61.2 4.5 0.00016 26.5 2.2 39 53-91 32-70 (72)
143 1ubd_C Protein (YY1 zinc finge 61.1 11 0.00038 26.8 4.6 84 88-175 7-96 (124)
144 2cur_A Skeletal muscle LIM-pro 60.8 5.6 0.00019 25.8 2.6 37 53-89 30-67 (69)
145 2fiy_A Protein FDHE homolog; F 60.1 3.7 0.00013 35.9 1.9 44 52-95 180-231 (309)
146 1vfy_A Phosphatidylinositol-3- 60.0 6.3 0.00022 26.4 2.7 30 55-84 12-44 (73)
147 2jp9_A Wilms tumor 1; DNA bind 59.5 6.6 0.00023 27.8 3.0 84 87-174 7-97 (119)
148 2csh_A Zinc finger protein 297 59.0 8.7 0.0003 26.9 3.5 53 110-168 35-90 (110)
149 2eln_A Zinc finger protein 406 58.9 9.4 0.00032 21.9 3.0 25 141-165 8-33 (38)
150 2vy4_A U11/U12 small nuclear r 58.8 2.9 9.9E-05 24.4 0.7 25 112-139 5-29 (37)
151 1rut_X Flinc4, fusion protein 57.8 3.3 0.00011 33.1 1.1 44 53-97 31-80 (188)
152 3uk3_C Zinc finger protein 217 57.6 7.8 0.00027 23.3 2.7 44 122-167 10-56 (57)
153 1b8t_A Protein (CRP1); LIM dom 57.5 8 0.00027 30.9 3.4 44 53-96 141-185 (192)
154 2dar_A PDZ and LIM domain prot 57.3 8 0.00027 26.7 3.0 33 53-85 50-82 (90)
155 1a7i_A QCRP2 (LIM1); LIM domai 57.0 4.5 0.00016 27.3 1.6 42 53-94 33-75 (81)
156 2jp9_A Wilms tumor 1; DNA bind 57.0 14 0.00049 25.9 4.5 105 53-165 5-118 (119)
157 3mjh_B Early endosome antigen 56.9 9.4 0.00032 21.8 2.6 26 142-169 5-31 (34)
158 1wyh_A SLIM 2, skeletal muscle 56.7 7 0.00024 25.5 2.5 33 53-85 32-64 (72)
159 1x5w_A Zinc finger protein 64, 56.2 11 0.00037 23.9 3.4 53 112-170 9-64 (70)
160 1x4k_A Skeletal muscle LIM-pro 55.6 6.8 0.00023 25.6 2.3 33 53-85 32-64 (72)
161 1sp2_A SP1F2; zinc finger, tra 55.6 12 0.00041 19.1 3.0 24 142-165 2-26 (31)
162 1x4w_A Hypothetical protein FL 55.1 4.7 0.00016 26.8 1.3 39 54-92 15-56 (67)
163 1wfk_A Zinc finger, FYVE domai 55.1 9.7 0.00033 26.6 3.1 32 53-84 8-42 (88)
164 2d9h_A Zinc finger protein 692 54.7 7.8 0.00027 25.3 2.5 48 122-171 13-66 (78)
165 1x4l_A Skeletal muscle LIM-pro 54.6 7.6 0.00026 25.4 2.4 33 53-85 34-66 (72)
166 2cot_A Zinc finger protein 435 54.2 18 0.00063 23.3 4.4 46 122-169 24-72 (77)
167 1tf6_A Protein (transcription 54.2 17 0.00058 28.1 4.9 15 53-67 11-27 (190)
168 1weo_A Cellulose synthase, cat 54.2 13 0.00045 26.1 3.5 45 53-97 15-69 (93)
169 1y02_A CARP2, FYVE-ring finger 53.7 8.8 0.0003 28.6 2.8 33 53-85 18-53 (120)
170 1a1h_A QGSR zinc finger peptid 53.1 14 0.00048 24.5 3.7 53 109-167 31-86 (90)
171 2lt7_A Transcriptional regulat 53.1 10 0.00034 28.3 3.1 55 110-170 48-105 (133)
172 2k9h_A Glycoprotein; hantaviru 52.5 7.5 0.00026 24.6 1.9 34 128-165 16-51 (57)
173 1dvp_A HRS, hepatocyte growth 52.4 7.3 0.00025 32.0 2.4 33 53-85 160-195 (220)
174 2i13_A AART; DNA binding, zinc 52.0 9.3 0.00032 29.7 3.0 115 53-177 20-139 (190)
175 1tf6_A Protein (transcription 52.0 23 0.00078 27.4 5.3 88 87-176 43-139 (190)
176 2lv2_A Insulinoma-associated p 52.0 16 0.00055 25.0 3.8 46 122-169 34-82 (85)
177 2vrw_B P95VAV, VAV1, proto-onc 51.8 11 0.00037 33.7 3.7 41 50-91 353-397 (406)
178 1x6e_A Zinc finger protein 24; 51.5 14 0.00047 23.6 3.3 53 111-169 13-68 (72)
179 2d8x_A Protein pinch; LIM doma 50.8 7.8 0.00027 25.2 1.9 33 53-85 30-62 (70)
180 2cu8_A Cysteine-rich protein 2 50.6 9.3 0.00032 25.3 2.4 33 53-85 35-68 (76)
181 1zfd_A SWI5; DNA binding motif 49.1 19 0.00064 18.4 3.1 26 141-166 2-28 (32)
182 1nyp_A Pinch protein; LIM doma 48.9 8.7 0.0003 24.6 1.9 33 53-85 30-62 (66)
183 3lqh_A Histone-lysine N-methyl 48.8 21 0.00072 28.5 4.6 42 56-97 4-65 (183)
184 1wig_A KIAA1808 protein; LIM d 48.1 9.4 0.00032 25.2 2.0 33 53-85 30-63 (73)
185 3zyq_A Hepatocyte growth facto 47.9 9.7 0.00033 31.5 2.5 31 54-84 164-197 (226)
186 2iyb_E Testin, TESS, TES; LIM 47.6 9.6 0.00033 24.4 2.0 32 53-84 31-63 (65)
187 1x4v_A Hypothetical protein LO 47.0 9.9 0.00034 24.9 1.9 37 54-91 12-51 (63)
188 2l7x_A Envelope glycoprotein; 46.4 7.4 0.00025 26.0 1.2 34 127-164 17-50 (77)
189 1wd2_A Ariadne-1 protein homol 46.4 5 0.00017 26.0 0.4 23 55-80 7-29 (60)
190 1g47_A Pinch protein; LIM doma 46.3 9.7 0.00033 25.1 1.9 33 53-85 38-70 (77)
191 1x3h_A Leupaxin; paxillin fami 46.2 15 0.00053 24.3 3.0 37 53-89 40-77 (80)
192 2egq_A FHL1 protein; LIM domai 45.6 9.1 0.00031 25.3 1.7 32 53-84 45-76 (77)
193 1llm_C Chimera of ZIF23-GCN4; 45.2 0.72 2.5E-05 31.5 -4.2 75 88-168 5-83 (88)
194 2ehe_A Four and A half LIM dom 44.6 11 0.00038 25.3 2.0 33 53-85 42-74 (82)
195 2cuq_A Four and A half LIM dom 44.4 16 0.00055 24.3 2.8 33 53-85 40-72 (80)
196 2d8y_A Eplin protein; LIM doma 44.3 57 0.002 22.1 5.8 38 53-90 41-79 (91)
197 2a25_A Ubiquitin ligase SIAH1; 43.9 8.1 0.00028 31.1 1.4 46 92-137 16-61 (193)
198 1b8t_A Protein (CRP1); LIM dom 43.7 13 0.00045 29.5 2.6 43 53-95 33-76 (192)
199 1ncs_A Peptide M30F, transcrip 43.5 19 0.00064 20.9 2.7 28 139-166 15-43 (47)
200 1wep_A PHF8; structural genomi 42.8 38 0.0013 22.8 4.5 44 52-96 10-64 (79)
201 2zet_C Melanophilin; complex, 42.6 16 0.00055 28.3 2.9 32 53-84 67-102 (153)
202 3vhs_A ATPase wrnip1; zinc fin 42.5 8.2 0.00028 20.4 0.8 13 150-162 12-24 (29)
203 1zbd_B Rabphilin-3A; G protein 42.0 14 0.00047 28.0 2.3 33 53-85 54-90 (134)
204 2dj7_A Actin-binding LIM prote 41.2 19 0.00066 24.2 2.8 32 53-85 41-72 (80)
205 2ent_A Krueppel-like factor 15 40.7 25 0.00085 20.0 3.0 27 141-167 11-38 (48)
206 1lpv_A Doublesex protein; tran 40.2 6.5 0.00022 24.7 0.2 29 122-152 13-41 (52)
207 2l7x_A Envelope glycoprotein; 40.2 23 0.00079 23.6 2.8 50 87-141 6-55 (77)
208 2dlo_A Thyroid receptor-intera 39.9 18 0.00062 24.1 2.5 33 53-85 40-73 (81)
209 2cor_A Pinch protein; LIM doma 39.6 23 0.00078 23.6 3.0 32 53-85 40-71 (79)
210 2eme_A Zinc finger protein 473 39.4 26 0.00089 19.7 2.9 29 140-170 10-39 (46)
211 1wys_A Riken cDNA 2310008M20 p 38.8 20 0.00068 24.3 2.5 36 55-91 15-53 (75)
212 2wbt_A B-129; zinc finger; 2.7 38.2 30 0.001 24.8 3.7 55 109-170 71-127 (129)
213 1x63_A Skeletal muscle LIM-pro 38.1 21 0.0007 23.8 2.6 33 53-85 42-74 (82)
214 2d8v_A Zinc finger FYVE domain 37.7 21 0.00071 23.6 2.3 30 53-85 7-38 (67)
215 1bbo_A Human enhancer-binding 37.3 43 0.0015 19.7 3.9 45 122-168 7-54 (57)
216 2jr6_A UPF0434 protein NMA0874 37.0 12 0.00039 25.0 1.0 28 53-83 7-34 (68)
217 1flk_A TNF receptor associated 37.0 9 0.00031 31.6 0.6 25 112-136 9-38 (228)
218 3f6q_B LIM and senescent cell 36.8 14 0.00049 23.7 1.5 31 53-83 38-68 (72)
219 3pwf_A Rubrerythrin; non heme 36.6 19 0.00066 28.3 2.5 13 85-97 152-164 (170)
220 1bhi_A CRE-BP1, ATF-2; CRE bin 36.5 28 0.00097 18.6 2.6 26 141-166 5-31 (38)
221 2gqj_A Zinc finger protein KIA 36.5 9.1 0.00031 26.5 0.5 57 109-171 21-82 (98)
222 2ab3_A ZNF29; zinc finger prot 36.3 28 0.00095 16.9 2.4 24 142-165 2-26 (29)
223 1f2i_G Fusion of N-terminal 17 36.0 17 0.00059 23.0 1.8 51 111-165 18-71 (73)
224 2ytg_A ZFP-95, zinc finger pro 35.9 28 0.00095 19.7 2.6 29 140-170 10-39 (46)
225 1x6h_A Transcriptional repress 35.8 42 0.0015 21.7 3.9 57 111-173 14-77 (86)
226 1x64_A Alpha-actinin-2 associa 35.4 24 0.00083 24.0 2.6 33 53-85 50-82 (89)
227 2eov_A Zinc finger protein 484 35.0 29 0.001 19.5 2.6 28 141-170 11-39 (46)
228 2lce_A B-cell lymphoma 6 prote 34.8 45 0.0015 21.1 3.8 45 122-168 23-70 (74)
229 1j2o_A FLIN2, fusion of rhombo 34.6 23 0.0008 25.4 2.5 40 53-93 29-72 (114)
230 2eoq_A Zinc finger protein 224 34.6 31 0.0011 19.4 2.7 28 141-170 11-39 (46)
231 2em5_A ZFP-95, zinc finger pro 34.3 32 0.0011 19.4 2.7 28 140-169 10-38 (46)
232 2ep0_A Zinc finger protein 28 34.3 31 0.0011 19.4 2.7 27 141-169 11-38 (46)
233 1va1_A Transcription factor SP 32.2 34 0.0012 18.3 2.5 25 141-165 7-32 (37)
234 2jny_A Uncharacterized BCR; st 32.0 23 0.0008 23.4 1.9 28 52-82 8-35 (67)
235 2emy_A Zinc finger protein 268 32.0 35 0.0012 19.2 2.7 28 141-170 11-39 (46)
236 2l3k_A Rhombotin-2, linker, LI 31.8 27 0.00092 25.5 2.5 42 53-94 35-78 (123)
237 2el6_A Zinc finger protein 268 31.8 40 0.0014 19.0 2.9 27 141-169 11-38 (46)
238 2e72_A POGO transposable eleme 31.4 40 0.0014 20.7 2.7 28 142-171 12-40 (49)
239 2ytr_A Zinc finger protein 347 31.3 29 0.001 19.5 2.2 27 141-169 11-38 (46)
240 2enc_A Zinc finger protein 224 31.2 37 0.0013 19.1 2.6 26 141-168 11-37 (46)
241 1we9_A PHD finger family prote 31.2 22 0.00075 22.8 1.7 20 53-72 5-26 (64)
242 2en6_A Zinc finger protein 268 31.2 31 0.0011 19.4 2.3 30 141-172 11-41 (46)
243 2eq4_A Zinc finger protein 224 31.0 35 0.0012 19.1 2.5 27 141-169 11-38 (46)
244 2epz_A Zinc finger protein 28 30.7 39 0.0013 18.9 2.7 28 141-170 11-39 (46)
245 2em9_A Zinc finger protein 224 30.6 36 0.0012 19.0 2.5 27 141-169 11-38 (46)
246 2eml_A Zinc finger protein 28 30.6 42 0.0014 18.8 2.8 28 141-170 11-39 (46)
247 2ytd_A Zinc finger protein 473 30.5 39 0.0013 19.0 2.7 29 140-170 10-39 (46)
248 2lbm_A Transcriptional regulat 30.4 68 0.0023 24.4 4.6 43 51-95 60-117 (142)
249 2eq0_A Zinc finger protein 347 29.4 45 0.0015 18.7 2.8 28 140-169 10-38 (46)
250 2emx_A Zinc finger protein 268 29.3 44 0.0015 18.5 2.8 28 141-170 9-37 (44)
251 2elz_A Zinc finger protein 224 29.1 41 0.0014 18.9 2.6 27 141-169 11-38 (46)
252 2emk_A Zinc finger protein 28 28.9 44 0.0015 18.8 2.7 29 141-171 11-40 (46)
253 2ytn_A Zinc finger protein 347 28.9 49 0.0017 18.5 2.9 29 140-170 10-39 (46)
254 2ept_A Zinc finger protein 32; 28.9 50 0.0017 17.9 2.9 25 141-167 9-34 (41)
255 2ene_A Zinc finger protein 347 28.8 45 0.0015 18.7 2.7 26 141-168 11-37 (46)
256 2em0_A Zinc finger protein 224 28.7 43 0.0015 18.7 2.6 27 141-169 11-38 (46)
257 2epw_A Zinc finger protein 268 28.6 43 0.0015 18.7 2.6 27 141-169 11-38 (46)
258 2en8_A Zinc finger protein 224 28.4 44 0.0015 18.7 2.6 28 140-169 10-38 (46)
259 2emm_A ZFP-95, zinc finger pro 28.4 44 0.0015 18.6 2.7 29 141-171 11-40 (46)
260 1wjv_A Cell growth regulating 28.4 20 0.00068 24.6 1.1 40 121-162 15-55 (79)
261 2ely_A Zinc finger protein 224 28.2 45 0.0015 18.7 2.7 29 141-171 11-40 (46)
262 2eop_A Zinc finger protein 268 28.2 46 0.0016 18.6 2.7 27 141-169 11-38 (46)
263 2yqq_A Zinc finger HIT domain- 28.1 52 0.0018 20.9 3.0 27 56-85 14-42 (56)
264 2yso_A ZFP-95, zinc finger pro 28.0 42 0.0015 18.8 2.5 28 141-170 11-39 (46)
265 2ytq_A Zinc finger protein 268 27.6 45 0.0016 18.7 2.6 27 141-169 11-38 (46)
266 2epr_A POZ-, at HOOK-, and zin 27.4 39 0.0013 19.3 2.3 31 141-173 11-42 (48)
267 2en1_A Zinc finger protein 224 27.0 46 0.0016 18.6 2.6 28 141-170 11-39 (46)
268 2em8_A Zinc finger protein 224 26.6 40 0.0014 19.0 2.2 28 141-170 11-39 (46)
269 2em7_A Zinc finger protein 224 26.5 47 0.0016 18.6 2.5 27 141-169 11-38 (46)
270 2eoe_A Zinc finger protein 347 26.4 40 0.0014 18.9 2.2 29 140-170 10-39 (46)
271 2epx_A Zinc finger protein 28 26.2 51 0.0017 18.4 2.6 26 141-168 11-37 (47)
272 2lv9_A Histone-lysine N-methyl 26.1 93 0.0032 21.8 4.4 41 53-94 27-75 (98)
273 2ytm_A Zinc finger protein 28 26.0 36 0.0012 19.2 1.9 28 141-170 11-39 (46)
274 4gzn_C ZFP-57, zinc finger pro 25.9 65 0.0022 20.1 3.3 44 122-168 10-56 (60)
275 2elx_A Zinc finger protein 406 25.8 59 0.002 16.5 2.7 25 141-167 6-31 (35)
276 1paa_A Yeast transcription fac 25.7 56 0.0019 15.8 2.5 25 142-168 2-27 (30)
277 2yu8_A Zinc finger protein 347 25.5 37 0.0013 19.1 1.9 29 140-170 10-39 (46)
278 2co8_A NEDD9 interacting prote 25.5 1.3E+02 0.0045 19.8 5.0 33 53-85 41-75 (82)
279 1klr_A Zinc finger Y-chromosom 25.4 51 0.0018 15.8 2.3 25 142-168 2-27 (30)
280 1rik_A E6APC1 peptide; E6-bind 25.3 55 0.0019 15.7 2.4 22 142-165 2-24 (29)
281 2hf1_A Tetraacyldisaccharide-1 25.1 21 0.00072 23.7 0.7 27 53-82 7-33 (68)
282 2jvx_A NF-kappa-B essential mo 25.0 24 0.00082 19.1 0.8 10 55-64 4-13 (28)
283 2eon_A ZFP-95, zinc finger pro 25.0 44 0.0015 18.8 2.2 26 141-168 11-37 (46)
284 3mpx_A FYVE, rhogef and PH dom 24.7 16 0.00053 32.9 0.0 32 53-84 374-408 (434)
285 2ysp_A Zinc finger protein 224 24.5 42 0.0014 18.8 2.0 26 141-168 11-37 (46)
286 1ard_A Yeast transcription fac 24.3 68 0.0023 15.2 2.8 23 142-166 2-25 (29)
287 2emp_A Zinc finger protein 347 24.2 47 0.0016 18.6 2.2 28 141-170 11-39 (46)
288 2ytj_A Zinc finger protein 484 24.2 63 0.0022 18.0 2.8 27 141-169 11-38 (46)
289 4ayb_P DNA-directed RNA polyme 24.0 32 0.0011 21.1 1.3 25 73-97 9-34 (48)
290 2eow_A Zinc finger protein 347 24.0 55 0.0019 18.2 2.5 28 140-169 10-38 (46)
291 2yto_A Zinc finger protein 484 23.7 66 0.0023 17.9 2.8 29 140-170 10-39 (46)
292 2emf_A Zinc finger protein 484 23.4 72 0.0025 17.7 3.0 27 141-169 11-38 (46)
293 1x6a_A LIMK-2, LIM domain kina 23.4 47 0.0016 21.9 2.3 33 53-85 40-74 (81)
294 2kvf_A Zinc finger and BTB dom 23.4 58 0.002 15.5 2.3 23 141-165 2-25 (28)
295 1srk_A Zinc finger protein ZFP 23.4 76 0.0026 16.2 2.9 25 141-167 6-31 (35)
296 2pk7_A Uncharacterized protein 23.4 24 0.00082 23.4 0.7 27 53-82 7-33 (69)
297 2js4_A UPF0434 protein BB2007; 23.3 22 0.00076 23.7 0.6 27 53-82 7-33 (70)
298 2lri_C Autoimmune regulator; Z 23.2 1.3E+02 0.0043 19.5 4.3 39 55-95 13-59 (66)
299 2em3_A Zinc finger protein 28 23.0 65 0.0022 17.9 2.7 27 141-169 11-38 (46)
300 2eoo_A ZFP-95, zinc finger pro 22.9 49 0.0017 18.5 2.1 28 140-169 10-38 (46)
301 2el5_A Zinc finger protein 268 22.7 80 0.0027 17.0 3.0 27 141-169 9-36 (42)
302 2eoz_A Zinc finger protein 473 22.7 53 0.0018 18.4 2.2 29 140-170 10-39 (46)
303 2ytf_A Zinc finger protein 268 22.5 64 0.0022 17.9 2.6 27 140-168 10-37 (46)
304 2kvh_A Zinc finger and BTB dom 22.3 63 0.0022 15.3 2.2 23 141-165 2-25 (27)
305 2el4_A Zinc finger protein 268 22.2 61 0.0021 18.0 2.4 28 140-169 10-38 (46)
306 2l4z_A DNA endonuclease RBBP8, 22.2 34 0.0011 25.1 1.4 39 53-96 60-98 (123)
307 2elt_A Zinc finger protein 406 22.2 74 0.0025 16.3 2.7 24 141-166 8-32 (36)
308 2epc_A Zinc finger protein 32; 22.1 81 0.0028 16.9 2.9 25 141-167 10-35 (42)
309 2emj_A Zinc finger protein 28 22.0 66 0.0022 17.9 2.5 28 140-169 10-38 (46)
310 2m0e_A Zinc finger and BTB dom 21.9 54 0.0018 15.6 1.9 23 142-166 2-25 (29)
311 2elm_A Zinc finger protein 406 21.8 80 0.0028 16.6 2.8 26 141-168 8-34 (37)
312 3ky9_A Proto-oncogene VAV; cal 21.8 62 0.0021 30.4 3.6 38 52-90 527-568 (587)
313 2ytb_A Zinc finger protein 32; 21.7 73 0.0025 17.1 2.7 25 141-167 10-35 (42)
314 2yu5_A Zinc finger protein 473 21.4 71 0.0024 17.5 2.6 26 141-168 11-37 (44)
315 2gmg_A Hypothetical protein PF 21.1 31 0.0011 25.0 1.0 21 72-96 72-94 (105)
316 2ep2_A Zinc finger protein 484 21.1 79 0.0027 17.5 2.8 27 141-169 11-38 (46)
317 3a1b_A DNA (cytosine-5)-methyl 21.1 92 0.0032 24.2 3.8 31 53-85 78-111 (159)
318 2gvi_A Conserved hypothetical 20.8 33 0.0011 27.7 1.3 32 53-84 171-202 (204)
319 2enf_A Zinc finger protein 347 20.7 68 0.0023 17.8 2.4 27 140-168 10-37 (46)
320 2eos_A B-cell lymphoma 6 prote 20.6 78 0.0027 17.1 2.6 25 141-167 10-35 (42)
321 2k16_A Transcription initiatio 20.6 1.2E+02 0.0041 19.8 3.9 42 53-94 17-67 (75)
322 2csz_A Synaptotagmin-like prot 20.5 1.7E+02 0.006 19.6 4.6 33 53-85 24-60 (76)
323 2epq_A POZ-, at HOOK-, and zin 20.5 57 0.0019 18.1 2.0 29 141-171 9-38 (45)
324 2emi_A Zinc finger protein 484 20.3 91 0.0031 17.2 3.0 27 141-169 11-38 (46)
325 1znf_A 31ST zinc finger from X 20.2 82 0.0028 14.6 2.6 21 143-165 2-23 (27)
326 1lko_A Rubrerythrin all-iron(I 20.1 43 0.0015 26.6 1.8 12 86-97 171-182 (191)
327 2yts_A Zinc finger protein 484 20.1 93 0.0032 17.1 3.0 27 140-168 10-37 (46)
328 2ytt_A Zinc finger protein 473 20.1 34 0.0012 19.3 0.9 27 141-169 11-38 (46)
No 1
>2a25_A Ubiquitin ligase SIAH1; protein-peptide complex, ligase; 2.20A {Homo sapiens} PDB: 2an6_A 1k2f_A
Probab=99.95 E-value=4.3e-29 Score=208.76 Aligned_cols=158 Identities=20% Similarity=0.331 Sum_probs=86.4
Q ss_pred HhhcceecccCCCCCccccccccchhhhhccCCCeeeeCCCCC--CCCccChhHHhhhhhhhCCCCccceeecceEEEEe
Q 038068 107 VIELVQVNCKNAEYGCQQKMSFSKKRGHEKTCQHSPLPCPLSD--CSFLGCSSQFVRHFMAKHNISAVPFKYNSLLNVNL 184 (269)
Q Consensus 107 ~i~~l~v~C~~~~~GC~~~~~~~~~~~He~~C~~~p~~Cp~~~--C~~~g~~~~l~~Hl~~~H~~~~~~~~~~~~~~~~l 184 (269)
+++++++||+|+.+||.+.++|.++..||++|+|+|+.||.++ |+|.|..++|..|+...|.|..+ . .+..+ +.+
T Consensus 1 v~~s~~~pC~~~~~GC~~~~~y~~~~~He~~C~f~p~~Cp~~g~~C~~~G~~~~l~~H~~~~H~~~~~-~-~g~~i-~f~ 77 (193)
T 2a25_A 1 VANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITT-L-QGEDI-VFL 77 (193)
T ss_dssp -----------------------------------CEECCCC--CCCCEECSTTHHHHHHHHCTTSCE-E-ESSEE-EEE
T ss_pred CccceEecCCCCCCCCCcccccccccchhhcCCCCCccCCCCCCCCcCCCCHHHHHHHHHHHCCCcce-e-cCceE-EEE
Confidence 4678999999999999999999999999999999999999976 99999999999999999998432 1 11111 122
Q ss_pred eccCCCCCCceEEEEeeeCCCeEEEEEcCccC--cc---ceEEEEEeecCC--CCCeEEEEEEecCCeEEEEeeeeeeec
Q 038068 185 NVNDINIDGKFSVLQEEKNDDVLFILNNNTGS--LG---NLVSVCCIASVR--KDLYYDIVARCVTGTTLKIQSSTWSSK 257 (269)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~lF~l~~~~~~--~g---~~v~v~ci~~~~--~~f~Y~l~~~~~~~~~l~~~s~~~~~~ 257 (269)
..+ .++++...|++...++++.|+|+..... .| .+|+|+||||.+ .+|+|+|++. +++|+|+||+++++++
T Consensus 78 ~~~-~~l~~~~~~~~v~~~~g~~Fll~~~~~~~~~g~~~~~~~V~~ig~~~ea~~f~Y~l~~~-~~~r~L~~~~~~~s~~ 155 (193)
T 2a25_A 78 ATD-INLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELN-GHRRRLTWEATPRSIH 155 (193)
T ss_dssp EEC-CC----CEEEEEEEETTEEEEEEEEEC------CEEEEEEEESSCHHHHTTEEEEEEEE-ETTEEEEEEECCEETT
T ss_pred ecc-cccccceeEEEEEEecCceEEEEEEEeccCCCCcEEEEEEEEeCCcchhcceEEEEEEE-cCCCEEEEEEEEEehh
Confidence 222 2334444454444578999999865443 34 257999999976 9999999999 8999999999999997
Q ss_pred c-ccCCCCCCCCC
Q 038068 258 V-RSDIPSPFGFF 269 (269)
Q Consensus 258 ~-~~~~~~~~~~~ 269 (269)
+ ..+..++.+||
T Consensus 156 e~~~~~~~~~d~L 168 (193)
T 2a25_A 156 EGIATAIMNSDCL 168 (193)
T ss_dssp TCSHHHHHTTCSE
T ss_pred hcccccccCCCEE
Confidence 5 55556656554
No 2
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=99.91 E-value=1.5e-24 Score=177.91 Aligned_cols=132 Identities=23% Similarity=0.420 Sum_probs=117.0
Q ss_pred CCceeecCCC-CeeeccCCCCCCcCceeeccCCceechhchhhc----CCCCCCCCCCCcc---ccchhHHHHhhcceec
Q 038068 43 GSEALTITDQ-DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI----KRNCPTCSSPTVI---VRNWAIEKVIELVQVN 114 (269)
Q Consensus 43 ~~~~~~~~~~-~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~----~~~Cp~C~~~~~~---~~~~~l~~~i~~l~v~ 114 (269)
|+...++... +.|.|+||++++.+|+ +++|||+||..|+.+| ...||.||.++.. .++..+++++.+++|.
T Consensus 6 g~~~~~~~~~~~~~~C~IC~~~~~~pv-~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~~~~~i~~l~v~ 84 (170)
T 3hcs_A 6 GYDVEFDPPLESKYECPICLMALREAV-QTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFAKREILSLMVK 84 (170)
T ss_dssp CBCSEESSCCCGGGBCTTTCSBCSSEE-ECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGCEECHHHHHHHHTSEEE
T ss_pred CCChhhccCCCCCCCCCCCChhhcCcE-ECCCCCHHHHHHHHHHHHhCCCCCCCCccCcchhhhhhhHHHHHHHhhcccC
Confidence 3334455544 8899999999999998 5799999999999998 3489999999874 4788899999999999
Q ss_pred ccCCCCCccccccccchhhhhccCCCeeeeCCCCCCCCccChhHHhhhhhhhCCCCccceeecce
Q 038068 115 CKNAEYGCQQKMSFSKKRGHEKTCQHSPLPCPLSDCSFLGCSSQFVRHFMAKHNISAVPFKYNSL 179 (269)
Q Consensus 115 C~~~~~GC~~~~~~~~~~~He~~C~~~p~~Cp~~~C~~~g~~~~l~~Hl~~~H~~~~~~~~~~~~ 179 (269)
|+|. ||++.+.+.++.+|+++|+|+++.|| +|++.+.+.+|..|+...+....+.+.|+..
T Consensus 85 C~n~--GC~~~~~~~~l~~H~~~C~~~~v~C~--~C~~~~~r~~l~~H~~~~C~~r~~~C~~C~~ 145 (170)
T 3hcs_A 85 CPNE--GCLHKMELRHLEDHQAHCEFALMDCP--QCQRPFQKFHINIHILKDCPRRQVSCDNCAA 145 (170)
T ss_dssp CCST--TCCCEEEGGGHHHHHTTCTTSEEECT--TTCCEEEGGGHHHHHHHTCTTCEEECTTTCC
T ss_pred CCCC--CCCceecHhHHHHHHhcCCceeeECC--CCChHHHHHHHHHHhhhhCCCCCeECCCCCC
Confidence 9985 99999999999999999999999999 8999999999999999999998888888854
No 3
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=99.73 E-value=4.4e-18 Score=131.05 Aligned_cols=86 Identities=27% Similarity=0.566 Sum_probs=77.5
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc----CCCCCCCCCCCcc---ccchhHHHHhhcceecccCCCCCcccc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI----KRNCPTCSSPTVI---VRNWAIEKVIELVQVNCKNAEYGCQQK 125 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~----~~~Cp~C~~~~~~---~~~~~l~~~i~~l~v~C~~~~~GC~~~ 125 (269)
+.+.|+||++++..|+. ++|||+||..|+..| ...||.||.++.. .++..+++++.++++.|+|. ||.|.
T Consensus 17 ~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~l~~~i~~l~v~C~n~--gC~~~ 93 (118)
T 3hct_A 17 SKYECPICLMALREAVQ-TPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFAKREILSLMVKCPNE--GCLHK 93 (118)
T ss_dssp GGGBCTTTCSBCSSEEE-CTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGCEECHHHHHHHHTSEEECSST--TCCCE
T ss_pred CCCCCCcCChhhcCeEE-CCcCChhhHHHHHHHHhhCCCCCCCCCCCcCHHhcccCHHHHHHHccceeECCCC--CCCCE
Confidence 78999999999999985 699999999999998 2489999998874 37888999999999999985 99999
Q ss_pred ccccchhhhhccCCCe
Q 038068 126 MSFSKKRGHEKTCQHS 141 (269)
Q Consensus 126 ~~~~~~~~He~~C~~~ 141 (269)
+.+.++++|+++|.+.
T Consensus 94 ~~~~~l~~H~~~c~~~ 109 (118)
T 3hct_A 94 MELRHLEDHQAHCEFA 109 (118)
T ss_dssp EEGGGSGGGTSSSCC-
T ss_pred EeeHHHHHHHHHchhh
Confidence 9999999999999875
No 4
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=99.68 E-value=4.9e-18 Score=134.84 Aligned_cols=86 Identities=28% Similarity=0.552 Sum_probs=75.1
Q ss_pred CCeeeccCCCCCCcCceeeccCCceechhchhhc---C-CCCCCCCCCCc------------cccchhHHHHhhcceecc
Q 038068 52 QDIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI---K-RNCPTCSSPTV------------IVRNWAIEKVIELVQVNC 115 (269)
Q Consensus 52 ~~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~---~-~~Cp~C~~~~~------------~~~~~~l~~~i~~l~v~C 115 (269)
.+.+.|+||++++.+|+ +++|||+||..|+.+| . ..||.||.++. ..++..+++.|.+++|.|
T Consensus 29 ~~~~~C~IC~~~~~~pv-~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~l~~~~~~~d~~~~~~i~~L~v~C 107 (141)
T 3knv_A 29 EAKYLCSACRNVLRRPF-QAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILESSSAFPDNAARREVESLPAVC 107 (141)
T ss_dssp CGGGBCTTTCSBCSSEE-ECTTSCEEEHHHHHHHGGGSCEECHHHHHTTCCCTTTTEECGGGCEECHHHHHHHHTSEEEC
T ss_pred CcCcCCCCCChhhcCcE-ECCCCCccCHHHHHHHHhcCCCCCCCCCCcccccccccccchhhhcccHHHHHHHccccccc
Confidence 47899999999999998 5799999999999998 2 47999998652 136788999999999999
Q ss_pred cCCCCCccccccccchhh-hhccCCC
Q 038068 116 KNAEYGCQQKMSFSKKRG-HEKTCQH 140 (269)
Q Consensus 116 ~~~~~GC~~~~~~~~~~~-He~~C~~ 140 (269)
+|. ||+|.+.+.++++ |+..|+.
T Consensus 108 pn~--GC~~~~~l~~l~~~H~~~~~~ 131 (141)
T 3knv_A 108 PSD--GCTWKGTLKEYESCHEGRCPL 131 (141)
T ss_dssp CST--TCCCEEEHHHHHHHTTTCCHH
T ss_pred CCC--CCCCEeEHHHHHHHHHHHhHH
Confidence 994 9999999999998 9988864
No 5
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=99.67 E-value=3.5e-17 Score=125.49 Aligned_cols=86 Identities=24% Similarity=0.487 Sum_probs=77.1
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc----CCCCCCCCCCCcc----ccchhHHHHhhcceecccCCCCCccc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI----KRNCPTCSSPTVI----VRNWAIEKVIELVQVNCKNAEYGCQQ 124 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~----~~~Cp~C~~~~~~----~~~~~l~~~i~~l~v~C~~~~~GC~~ 124 (269)
+.+.|+||++++.+|+. ++|||+||..|+.+| ...||.|+.++.. ..+..+.+++.++++.|+|. ||++
T Consensus 22 ~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~~l~~~i~~l~v~C~~~--gC~~ 98 (116)
T 1rmd_A 22 KSISCQICEHILADPVE-TSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDLESPVKSFLNILNSLMVKCPAQ--DCNE 98 (116)
T ss_dssp HHTBCTTTCSBCSSEEE-CTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCBCCCHHHHHHHHHCEEECCST--TCCC
T ss_pred CCCCCCCCCcHhcCcEE-cCCCCcccHHHHHHHHhHCcCcCCCCCCCCCHhhccccHHHHHHHHHHhcCCCCCC--CCcc
Confidence 57899999999999995 699999999999988 3579999998863 24677899999999999997 9999
Q ss_pred cccccchhhhhccCCCe
Q 038068 125 KMSFSKKRGHEKTCQHS 141 (269)
Q Consensus 125 ~~~~~~~~~He~~C~~~ 141 (269)
.+.+.++++|+++|.+.
T Consensus 99 ~~~~~~~~~H~~~C~~~ 115 (116)
T 1rmd_A 99 EVSLEKYNHHVSSHKES 115 (116)
T ss_dssp EEEHHHHHHHHHTSCCC
T ss_pred hhhHhHHHHHHHHhhcc
Confidence 99999999999999874
No 6
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=99.13 E-value=2.6e-11 Score=85.83 Aligned_cols=60 Identities=23% Similarity=0.480 Sum_probs=50.7
Q ss_pred CCeeeccCCCCCCcCceeeccCCceechhchhhc----CCCCCCCCCCCcc---ccchhHHHHhhcce
Q 038068 52 QDIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI----KRNCPTCSSPTVI---VRNWAIEKVIELVQ 112 (269)
Q Consensus 52 ~~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~----~~~Cp~C~~~~~~---~~~~~l~~~i~~l~ 112 (269)
++.+.|+||++++.+|+. .+|||+||..|+.+| ...||.|+.++.. .+|..++++++.+.
T Consensus 6 ~~~~~C~IC~~~~~~Pv~-~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~~~l~~n~~l~~~i~~~~ 72 (78)
T 1t1h_A 6 PEYFRCPISLELMKDPVI-VSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLKSLIALWC 72 (78)
T ss_dssp SSSSSCTTTSCCCSSEEE-ETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSCCCEECTTTHHHHHHHH
T ss_pred cccCCCCCccccccCCEE-cCCCCeecHHHHHHHHHHCcCCCCCCcCCCChhhCccCHHHHHHHHHHH
Confidence 478999999999999995 599999999999998 3569999998863 46888888887654
No 7
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=99.12 E-value=3.7e-11 Score=87.77 Aligned_cols=64 Identities=23% Similarity=0.494 Sum_probs=53.3
Q ss_pred CeeeccCCCCCCcCceeecc-CCceechhchhhc-----CCCCCCCCCCCc----cccchhHHHHhhcceecccC
Q 038068 53 DIFDCPICFEPLTVPVFQCV-NGHLACSDCCAKI-----KRNCPTCSSPTV----IVRNWAIEKVIELVQVNCKN 117 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~-cgH~fC~~C~~~~-----~~~Cp~C~~~~~----~~~~~~l~~~i~~l~v~C~~ 117 (269)
+.+.|+||++++.+|+. .+ |||+||..|+..| ...||.|+.++. ...|..+.++++.++-.-.+
T Consensus 12 ~~~~C~IC~~~~~~p~~-~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~~~~~n~~l~~~i~~~~~~~~~ 85 (92)
T 3ztg_A 12 DELLCLICKDIMTDAVV-IPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPDALIANKFLRQAVNNFKNETGY 85 (92)
T ss_dssp TTTEETTTTEECSSCEE-CTTTCCEECHHHHHHHHHHCTTCCCTTTCCSSCCTTSCEECHHHHHHHHHHHHHHTC
T ss_pred cCCCCCCCChhhcCceE-CCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcCCCccccCcCHHHHHHHHHHHHHHhH
Confidence 67999999999999995 57 9999999999987 258999999873 35788899988887665443
No 8
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=99.05 E-value=1.4e-10 Score=83.73 Aligned_cols=60 Identities=15% Similarity=0.033 Sum_probs=51.8
Q ss_pred CCeeeccCCCCCCcCceeeccCCceechhchhhc---CCCCCCCCCCCcc---ccchhHHHHhhcce
Q 038068 52 QDIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI---KRNCPTCSSPTVI---VRNWAIEKVIELVQ 112 (269)
Q Consensus 52 ~~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~~---~~~~~l~~~i~~l~ 112 (269)
++.|.||||++++.+||. .+|||+||..||.+| ...||.|+.++.. ..|..+.++|+.+.
T Consensus 12 p~~~~CpI~~~~m~dPV~-~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~~l~pn~~L~~~i~~~~ 77 (85)
T 2kr4_A 12 PDEFRDPLMDTLMTDPVR-LPSGTVMDRSIILRHLLNSPTDPFNRQMLTESMLEPVPELKEQIQAWM 77 (85)
T ss_dssp CTTTBCTTTCSBCSSEEE-CTTSCEEEHHHHHHHHHHCSBCTTTCCBCCGGGCEECHHHHHHHHHHH
T ss_pred chheECcccCchhcCCeE-CCCCCEECHHHHHHHHhcCCCCCCCcCCCChHhcchHHHHHHHHHHHH
Confidence 578999999999999995 589999999999998 5689999998863 57888888887653
No 9
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=99.05 E-value=2.2e-10 Score=84.93 Aligned_cols=63 Identities=19% Similarity=0.125 Sum_probs=53.7
Q ss_pred CCCeeeccCCCCCCcCceeeccCC-ceechhchhhc---CCCCCCCCCCCcc---ccchhHHHHhhcceec
Q 038068 51 DQDIFDCPICFEPLTVPVFQCVNG-HLACSDCCAKI---KRNCPTCSSPTVI---VRNWAIEKVIELVQVN 114 (269)
Q Consensus 51 ~~~~l~C~iC~~~l~~Pv~~c~cg-H~fC~~C~~~~---~~~Cp~C~~~~~~---~~~~~l~~~i~~l~v~ 114 (269)
.++.|.||||++++++||. .+|| |+||..||.+| ...||.|+.++.. .+|..+.++|+.+.-.
T Consensus 19 ~p~~~~CpI~~~~m~dPV~-~~cG~htf~r~cI~~~l~~~~~cP~~~~~l~~~~L~pn~~Lk~~I~~~~~~ 88 (98)
T 1wgm_A 19 ACDEFLDPIMSTLMCDPVV-LPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAE 88 (98)
T ss_dssp CCTTTBCTTTCSBCSSEEE-CTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCTTTSEECHHHHHHHHHHHHH
T ss_pred CcHhcCCcCccccccCCeE-CCCCCeEECHHHHHHHHHhCCCCCCCCCCCChhhceEcHHHHHHHHHHHHH
Confidence 3578999999999999995 6999 99999999998 4679999998863 5788888888877543
No 10
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.03 E-value=2.2e-10 Score=79.80 Aligned_cols=46 Identities=22% Similarity=0.394 Sum_probs=41.1
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc---CCCCCCCCCCCcc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI---KRNCPTCSSPTVI 98 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~~ 98 (269)
+.+.|+||++.+.+|+...+|||.||..|+..| ...||.||.++..
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 62 (72)
T 2djb_A 14 PYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQ 62 (72)
T ss_dssp GGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCS
T ss_pred CCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCc
Confidence 678999999999999865599999999999998 5789999998763
No 11
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=99.01 E-value=1e-10 Score=86.60 Aligned_cols=61 Identities=28% Similarity=0.622 Sum_probs=51.5
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc---CCCCCCCCCCCcc---ccchhHHHHhhccee
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI---KRNCPTCSSPTVI---VRNWAIEKVIELVQV 113 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~~---~~~~~l~~~i~~l~v 113 (269)
+.+.|+||++.+.+|+...+|||.||..|+..| ...||.|+..+.. .+|..++++++.++-
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~l~~n~~l~~~i~~~~~ 87 (99)
T 2y43_A 21 DLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDLKNNRILDELVKSLNF 87 (99)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCGGGCEECHHHHHHHHHHHH
T ss_pred CCCCcccCChhhCCcCEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCChhhCCcCHHHHHHHHHHHH
Confidence 678999999999999865489999999999998 4689999998873 468888888876653
No 12
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.00 E-value=3.8e-10 Score=80.38 Aligned_cols=56 Identities=23% Similarity=0.430 Sum_probs=44.6
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc---CCCCCCCCCCCcc--ccchhHHHHhh
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI---KRNCPTCSSPTVI--VRNWAIEKVIE 109 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~~--~~~~~l~~~i~ 109 (269)
+.+.|+||++.+..|+. .+|||+||..|+..| ...||.|+.++.. ..+..+.+.+.
T Consensus 14 ~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~~l~~~~~ 74 (81)
T 2csy_A 14 IPFRCFICRQAFQNPVV-TKCRHYFCESCALEHFRATPRCYICDQPTGGIFNPAKELMAKLQ 74 (81)
T ss_dssp CCSBCSSSCSBCCSEEE-CTTSCEEEHHHHHHHHHHCSBCSSSCCBCCSCCEECHHHHHHHS
T ss_pred CCCCCcCCCchhcCeeE-ccCCCHhHHHHHHHHHHCCCcCCCcCccccccCCcHHHHHHHHH
Confidence 56899999999999985 699999999999998 5689999998762 23444444433
No 13
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=99.00 E-value=1.3e-10 Score=86.31 Aligned_cols=57 Identities=28% Similarity=0.604 Sum_probs=45.9
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc---C-CCCCCCCCCCcc---ccchhHHHHhh
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI---K-RNCPTCSSPTVI---VRNWAIEKVIE 109 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~---~-~~Cp~C~~~~~~---~~~~~l~~~i~ 109 (269)
+.+.|+||++++..|+...+|||+||..|+..| . ..||.||.++.. .++..++.+++
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~~l~~~~~~~~i~~ 84 (100)
T 3lrq_A 21 EVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCRWAEEVTQ 84 (100)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCEECTTHHHHHH
T ss_pred CCCCCccCCccccCccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCCHHHhHhhHHHHHHHH
Confidence 678999999999999964699999999999998 3 589999998863 34555554443
No 14
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=98.99 E-value=9.5e-11 Score=82.94 Aligned_cols=44 Identities=36% Similarity=0.768 Sum_probs=39.1
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc----------CCCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI----------KRNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~----------~~~Cp~C~~~~~ 97 (269)
+.+.|+||++.+..|+. .+|||.||..|+.+| ...||.||..+.
T Consensus 11 ~~~~C~IC~~~~~~p~~-l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~ 64 (79)
T 2egp_A 11 EEVTCPICLELLTEPLS-LDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYS 64 (79)
T ss_dssp CCCEETTTTEECSSCCC-CSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCC
T ss_pred cCCCCcCCCcccCCeeE-CCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCC
Confidence 67899999999999985 699999999999986 246999999876
No 15
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=98.97 E-value=2.8e-10 Score=84.61 Aligned_cols=60 Identities=15% Similarity=0.053 Sum_probs=52.1
Q ss_pred CCeeeccCCCCCCcCceeeccCCceechhchhhc---CCCCCCCCCCCcc---ccchhHHHHhhcce
Q 038068 52 QDIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI---KRNCPTCSSPTVI---VRNWAIEKVIELVQ 112 (269)
Q Consensus 52 ~~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~~---~~~~~l~~~i~~l~ 112 (269)
++.|.||||++++.+||. .+|||+||..||.+| ...||.|+.++.. .+|..+.++|..+.
T Consensus 27 p~~~~CpI~~~~m~dPV~-~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~~L~pn~~Lk~~I~~~~ 92 (100)
T 2kre_A 27 PDEFRDPLMDTLMTDPVR-LPSGTIMDRSIILRHLLNSPTDPFNRQTLTESMLEPVPELKEQIQAWM 92 (100)
T ss_dssp STTTBCTTTCSBCSSEEE-ETTTEEEEHHHHHHHTTSCSBCSSSCCBCCTTSSEECHHHHHHHHHHH
T ss_pred cHhhCCcCccCcccCCeE-CCCCCEEchHHHHHHHHcCCCCCCCCCCCChhhceECHHHHHHHHHHH
Confidence 588999999999999996 589999999999998 4689999998863 57888888887764
No 16
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=98.97 E-value=3e-10 Score=85.50 Aligned_cols=60 Identities=13% Similarity=0.294 Sum_probs=49.6
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc---CCCCCCCCCCCcc-------ccchhHHHHhhcce
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI---KRNCPTCSSPTVI-------VRNWAIEKVIELVQ 112 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~~-------~~~~~l~~~i~~l~ 112 (269)
+.+.|+||.+++.+|+...+|||+||..|+..| ...||.|+..+.. ..|..+.+++..+.
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~l~~n~~l~~~i~~~~ 83 (108)
T 2ckl_A 14 PHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLV 83 (108)
T ss_dssp GGTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCSSCGGGGEEECHHHHHHHHHHS
T ss_pred CcCCCccCChHHhCcCEeCCCCChhhHHHHHHHHHhCCcCcCCCccccccCcccccCcCHHHHHHHHHHh
Confidence 678999999999999965599999999999998 4689999998763 35677777776543
No 17
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=98.96 E-value=2.2e-10 Score=90.08 Aligned_cols=45 Identities=29% Similarity=0.514 Sum_probs=40.1
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc---CCCCCCCCCCCcc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI---KRNCPTCSSPTVI 98 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~~ 98 (269)
+++.|+||++.+.+|+. .+|||.||..|+..| ...||.||.++..
T Consensus 52 ~~~~C~iC~~~~~~~~~-~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 99 (138)
T 4ayc_A 52 NELQCIICSEYFIEAVT-LNCAHSFCSYCINEWMKRKIECPICRKDIKS 99 (138)
T ss_dssp HHSBCTTTCSBCSSEEE-ETTSCEEEHHHHHHHTTTCSBCTTTCCBCCC
T ss_pred ccCCCcccCcccCCceE-CCCCCCccHHHHHHHHHcCCcCCCCCCcCCC
Confidence 56889999999999995 599999999999998 5679999998863
No 18
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=98.96 E-value=2.4e-10 Score=88.14 Aligned_cols=58 Identities=26% Similarity=0.526 Sum_probs=48.9
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc----CCCCCCCCCCCcc----ccchhHHHHhhcc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI----KRNCPTCSSPTVI----VRNWAIEKVIELV 111 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~----~~~Cp~C~~~~~~----~~~~~l~~~i~~l 111 (269)
+.+.|+||++++.+|+. .+|||+||..|+..| ...||.||.++.. ..|..+.+++..+
T Consensus 51 ~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~n~~l~~~i~~~ 116 (124)
T 3fl2_A 51 ETFQCICCQELVFRPIT-TVCQHNVCKDCLDRSFRAQVFSCPACRYDLGRSYAMQVNQPLQTVLNQL 116 (124)
T ss_dssp HHTBCTTTSSBCSSEEE-CTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTTCCCCCCHHHHHHHHHH
T ss_pred cCCCCCcCChHHcCcEE-eeCCCcccHHHHHHHHhHCcCCCCCCCccCCCCCCCCCCHHHHHHHHHH
Confidence 67899999999999995 599999999999988 2489999998864 4677888777654
No 19
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.94 E-value=3e-10 Score=86.80 Aligned_cols=60 Identities=28% Similarity=0.628 Sum_probs=49.6
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc-CCCCCCCCCCCcc---ccchhHHHHhhcce
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI-KRNCPTCSSPTVI---VRNWAIEKVIELVQ 112 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~-~~~Cp~C~~~~~~---~~~~~l~~~i~~l~ 112 (269)
+.+.|+||++++..|+...+|||+||..|+..| ...||.|+.++.. ..|..+.+++..++
T Consensus 21 ~~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~~~CP~Cr~~~~~~~~~~n~~l~~l~~~~~ 84 (117)
T 1jm7_B 21 KLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPAWIQDLKINRQLDSMIQLCS 84 (117)
T ss_dssp HTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTTTBCSSSCCBCSCSSCCCCHHHHHHHHHHH
T ss_pred hCCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhcCCCcCCCCcCccccccccHHHHHHHHHHH
Confidence 678999999999999964489999999999998 4589999998852 45777777776543
No 20
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.93 E-value=6.9e-10 Score=75.87 Aligned_cols=44 Identities=30% Similarity=0.671 Sum_probs=39.5
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc----CCCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI----KRNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~----~~~Cp~C~~~~~ 97 (269)
+.+.|+||++.+..|+. .+|||+||..|+.+| ...||.||.++.
T Consensus 14 ~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 61 (66)
T 2ecy_A 14 DKYKCEKCHLVLCSPKQ-TECGHRFCESCMAALLSSSSPKCTACQESIV 61 (66)
T ss_dssp CCEECTTTCCEESSCCC-CSSSCCCCHHHHHHHHTTSSCCCTTTCCCCC
T ss_pred cCCCCCCCChHhcCeeE-CCCCCHHHHHHHHHHHHhCcCCCCCCCcCCC
Confidence 67999999999999985 699999999999988 357999999875
No 21
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.92 E-value=4.6e-10 Score=80.24 Aligned_cols=54 Identities=30% Similarity=0.623 Sum_probs=43.5
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc---------CCCCCCCCCCCcc---ccchhHHHH
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI---------KRNCPTCSSPTVI---VRNWAIEKV 107 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~---------~~~Cp~C~~~~~~---~~~~~l~~~ 107 (269)
+.+.|+||++.+..|+. .+|||.||..|+..| ...||.|+..+.. .+|..++++
T Consensus 18 ~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~~n~~l~~~ 83 (85)
T 2ecv_A 18 EEVTCPICLELLTQPLS-LDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRPNRHVANI 83 (85)
T ss_dssp CCCCCTTTCSCCSSCBC-CSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSSSCCCSCCCCCC
T ss_pred CCCCCCCCCcccCCcee-CCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHHhcCccHHHHHh
Confidence 67899999999999985 599999999999887 4689999998763 344444433
No 22
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.92 E-value=5e-10 Score=74.21 Aligned_cols=45 Identities=24% Similarity=0.539 Sum_probs=40.3
Q ss_pred CCeeeccCCCCCCcCceeeccCCceechhchhhcCCCCCCCCCCCc
Q 038068 52 QDIFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTV 97 (269)
Q Consensus 52 ~~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~~~~Cp~C~~~~~ 97 (269)
.+.+.|+||++.+..|+. .+|||+||..|+..+...||.||..+.
T Consensus 4 ~~~~~C~IC~~~~~~p~~-l~CgH~fC~~Ci~~~~~~CP~Cr~~~~ 48 (56)
T 1bor_A 4 FQFLRCQQCQAEAKCPKL-LPCLHTLCSGCLEASGMQCPICQAPWP 48 (56)
T ss_dssp CCCSSCSSSCSSCBCCSC-STTSCCSBTTTCSSSSSSCSSCCSSSS
T ss_pred ccCCCceEeCCccCCeEE-cCCCCcccHHHHccCCCCCCcCCcEee
Confidence 367899999999999985 699999999999988779999999875
No 23
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=98.92 E-value=9.9e-10 Score=76.92 Aligned_cols=44 Identities=32% Similarity=0.660 Sum_probs=39.0
Q ss_pred CeeeccCCCCCCcCceeecc-CCceechhchhhc---C--CCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTVPVFQCV-NGHLACSDCCAKI---K--RNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~-cgH~fC~~C~~~~---~--~~Cp~C~~~~~ 97 (269)
+.+.|+||++++.+|+. .+ |||+||..|+..| . ..||.||.++.
T Consensus 14 ~~~~C~IC~~~~~~p~~-~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 63 (74)
T 2yur_A 14 DELLCLICKDIMTDAVV-IPCCGNSYCDECIRTALLESDEHTCPTCHQNDV 63 (74)
T ss_dssp GGGSCSSSCCCCTTCEE-CSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSC
T ss_pred CCCCCcCCChHHhCCeE-cCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCC
Confidence 77899999999999996 57 9999999999998 2 58999999754
No 24
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.91 E-value=4e-10 Score=80.57 Aligned_cols=54 Identities=33% Similarity=0.681 Sum_probs=43.4
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc---------CCCCCCCCCCCcc---ccchhHHHH
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI---------KRNCPTCSSPTVI---VRNWAIEKV 107 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~---------~~~Cp~C~~~~~~---~~~~~l~~~ 107 (269)
+.+.|+||++.+..|+. .+|||.||..|+..| ...||.|+..+.. .+|..++++
T Consensus 18 ~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~~n~~l~~~ 83 (85)
T 2ecw_A 18 EEVTCPICLELLKEPVS-ADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFGNLKPNLHVANI 83 (85)
T ss_dssp TTTSCTTTCSCCSSCEE-CTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTTCCEECSCCCSS
T ss_pred cCCCCcCCChhhCccee-CCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHHhCCcCHHHHHh
Confidence 67899999999999984 699999999999986 2479999998763 345544443
No 25
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=98.91 E-value=4.6e-10 Score=89.63 Aligned_cols=59 Identities=25% Similarity=0.474 Sum_probs=50.2
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc----CCCCCCCCCCCcc----ccchhHHHHhhcce
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI----KRNCPTCSSPTVI----VRNWAIEKVIELVQ 112 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~----~~~Cp~C~~~~~~----~~~~~l~~~i~~l~ 112 (269)
+.+.|+||++++.+|+. .+|||+||..|+..| ...||.||.++.. ..|..+.+++..+.
T Consensus 77 ~~~~C~IC~~~~~~pv~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~l~~n~~l~~lv~~~~ 143 (150)
T 1z6u_A 77 QSFMCVCCQELVYQPVT-TECFHNVCKDCLQRSFKAQVFSCPACRHDLGQNYIMIPNEILQTLLDLFF 143 (150)
T ss_dssp HHTBCTTTSSBCSSEEE-CTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTTCCCCBCHHHHHHHHHHS
T ss_pred cCCEeecCChhhcCCEE-cCCCCchhHHHHHHHHHhCCCcCCCCCccCCCCCCCCCCHHHHHHHHHHh
Confidence 67899999999999996 699999999999998 2379999998873 36888888887654
No 26
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.90 E-value=1.2e-09 Score=75.78 Aligned_cols=44 Identities=23% Similarity=0.553 Sum_probs=39.4
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc---CCCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI---KRNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~ 97 (269)
+.+.|+||++.+..|+. .+|||.||..|+.+| ...||+||..+.
T Consensus 14 ~~~~C~IC~~~~~~~~~-~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (71)
T 2d8t_A 14 TVPECAICLQTCVHPVS-LPCKHVFCYLCVKGASWLGKRCALCRQEIP 60 (71)
T ss_dssp SCCBCSSSSSBCSSEEE-ETTTEEEEHHHHHHCTTCSSBCSSSCCBCC
T ss_pred CCCCCccCCcccCCCEE-ccCCCHHHHHHHHHHHHCCCcCcCcCchhC
Confidence 66899999999999985 599999999999998 467999999875
No 27
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=98.88 E-value=7e-10 Score=89.80 Aligned_cols=61 Identities=25% Similarity=0.491 Sum_probs=51.1
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc----CCCCCCCCCCCcc----ccchhHHHHhhccee
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI----KRNCPTCSSPTVI----VRNWAIEKVIELVQV 113 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~----~~~Cp~C~~~~~~----~~~~~l~~~i~~l~v 113 (269)
+.+.|+||++.+.+|+...+|||+||..|+..| ...||.|+.++.. ..|..+++++..+.-
T Consensus 53 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~l~~~~~l~~~i~~~~~ 121 (165)
T 2ckl_B 53 SELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYP 121 (165)
T ss_dssp HHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCCSGGGEEECHHHHHHHHHHC-
T ss_pred CCCCCcccChHhhCcCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCCCcccCCcCHHHHHHHHHHHc
Confidence 678999999999999965599999999999998 4569999998852 467888888887754
No 28
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.86 E-value=2.7e-09 Score=74.22 Aligned_cols=44 Identities=34% Similarity=0.741 Sum_probs=39.1
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhcC------CCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKIK------RNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~~------~~Cp~C~~~~~ 97 (269)
+.+.|+||++.+..|+. .+|||.||..|+..|. ..||.||.++.
T Consensus 19 ~~~~C~IC~~~~~~~~~-~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 68 (73)
T 2ysl_A 19 EEVICPICLDILQKPVT-IDCGHNFCLKCITQIGETSCGFFKCPLCKTSVR 68 (73)
T ss_dssp CCCBCTTTCSBCSSEEE-CTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCC
T ss_pred cCCEeccCCcccCCeEE-cCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCC
Confidence 67899999999999996 4999999999999982 27999999875
No 29
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.82 E-value=1.8e-09 Score=79.24 Aligned_cols=61 Identities=30% Similarity=0.519 Sum_probs=49.6
Q ss_pred CCeeeccCCCCCCcCceeeccCCceechhchhhc--C-------CCCCC--CCCC-Cc---cccchhHHHHhhcce
Q 038068 52 QDIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI--K-------RNCPT--CSSP-TV---IVRNWAIEKVIELVQ 112 (269)
Q Consensus 52 ~~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~--~-------~~Cp~--C~~~-~~---~~~~~~l~~~i~~l~ 112 (269)
.+.|.||||+++|.+||....|||+||..||..| . ..||. |+.. +. ..+|..|.++|+.++
T Consensus 5 ~~~~~CPI~~~~~~dPV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~~l~~~~L~pn~~L~~~I~~~~ 80 (94)
T 2yu4_A 5 SSGFTCPITKEEMKKPVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTDIRKSDLIQDEALRRAIENHN 80 (94)
T ss_dssp SSCCBCTTTCSBCSSEEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCCCBCGGGEEECHHHHHHHHHHH
T ss_pred CcEeECcCcCchhcCCEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCcccccCHhhCcCCHHHHHHHHHHH
Confidence 3679999999999999964249999999999988 2 38999 8865 44 357888998888774
No 30
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.80 E-value=2.2e-09 Score=73.59 Aligned_cols=44 Identities=32% Similarity=0.747 Sum_probs=38.7
Q ss_pred CeeeccCCCCCCcCc-------eeeccCCceechhchhhc---CCCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTVP-------VFQCVNGHLACSDCCAKI---KRNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~P-------v~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~ 97 (269)
+.+.|+||++.+..| + ..+|||.||..|+..| ...||.||.++.
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~-~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 14 GTVSCPICMDGYSEIVQNGRLIV-STECGHVFCSQCLRDSLKNANTCPTCRKKIN 67 (69)
T ss_dssp CCCCCTTTCCCHHHHTTTTCCEE-ECSSSCEEEHHHHHHHHHHCSSCTTTCCCCC
T ss_pred CCCCCcccCccccccccccCCeE-eCCCCChhcHHHHHHHHHcCCCCCCCCCccC
Confidence 678999999999887 5 5699999999999998 568999998764
No 31
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.80 E-value=2.9e-09 Score=92.67 Aligned_cols=62 Identities=21% Similarity=0.195 Sum_probs=52.4
Q ss_pred CCCeeeccCCCCCCcCceeeccCCceechhchhhc----CCCCCCCCCCCcc---ccchhHHHHhhccee
Q 038068 51 DQDIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI----KRNCPTCSSPTVI---VRNWAIEKVIELVQV 113 (269)
Q Consensus 51 ~~~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~----~~~Cp~C~~~~~~---~~~~~l~~~i~~l~v 113 (269)
.++.+.||||.+++.+||. .+|||+||..|+.+| ...||.|+.++.. .+|..+.++|..+.-
T Consensus 205 ~~~~~~c~i~~~~~~dPv~-~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~~~l~~n~~l~~~i~~~~~ 273 (281)
T 2c2l_A 205 IPDYLCGKISFELMREPCI-TPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQLIPNLAMKEVIDAFIS 273 (281)
T ss_dssp CCSTTBCTTTCSBCSSEEE-CSSCCEEETTHHHHHHHHTCSSCTTTCCCCCGGGCEECHHHHHHHHHHHT
T ss_pred CCcccCCcCcCCHhcCCeE-CCCCCEECHHHHHHHHHHCCCCCcCCCCCCchhcCcccHHHHHHHHHHHH
Confidence 4588999999999999995 689999999999988 2349999999863 578889988887653
No 32
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.79 E-value=7.1e-09 Score=70.02 Aligned_cols=39 Identities=38% Similarity=0.817 Sum_probs=34.5
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc------CCCCCCC
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI------KRNCPTC 92 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~------~~~Cp~C 92 (269)
+.+.|+||++.+.+|+. .+|||+||..|+.+| ...||.|
T Consensus 19 ~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 19 EEVICPICLDILQKPVT-IDCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCBCTTTCSBCSSCEE-CTTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred cCCCCCcCCchhCCeEE-eCCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 67899999999999996 599999999999988 2369987
No 33
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=98.78 E-value=2.2e-09 Score=81.57 Aligned_cols=44 Identities=30% Similarity=0.597 Sum_probs=39.5
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc----CCCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI----KRNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~----~~~Cp~C~~~~~ 97 (269)
+.+.|+||++++..|+. .+|||+||..|+..| ...||.||..+.
T Consensus 14 ~~~~C~iC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 61 (115)
T 3l11_A 14 SECQCGICMEILVEPVT-LPCNHTLCKPCFQSTVEKASLCCPFCRRRVS 61 (115)
T ss_dssp HHHBCTTTCSBCSSCEE-CTTSCEECHHHHCCCCCTTTSBCTTTCCBCH
T ss_pred CCCCCccCCcccCceeE-cCCCCHHhHHHHHHHHhHCcCCCCCCCcccC
Confidence 67999999999999996 499999999999988 347999999875
No 34
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.76 E-value=1.6e-09 Score=81.66 Aligned_cols=44 Identities=34% Similarity=0.851 Sum_probs=39.0
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc--C----CCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI--K----RNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~--~----~~Cp~C~~~~~ 97 (269)
+.+.|+||++.+..|+. .+|||.||..|+..| . ..||.|+.++.
T Consensus 20 ~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 69 (112)
T 1jm7_A 20 KILECPICLELIKEPVS-TKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDIT 69 (112)
T ss_dssp HHTSCSSSCCCCSSCCB-CTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCC
T ss_pred CCCCCcccChhhcCeEE-CCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCC
Confidence 56899999999999985 699999999999988 2 37999999876
No 35
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=98.75 E-value=2.4e-09 Score=74.01 Aligned_cols=47 Identities=30% Similarity=0.686 Sum_probs=40.0
Q ss_pred CCeeeccCCCCCCcCce------eeccCCceechhchhhc---CCCCCCCCCCCcc
Q 038068 52 QDIFDCPICFEPLTVPV------FQCVNGHLACSDCCAKI---KRNCPTCSSPTVI 98 (269)
Q Consensus 52 ~~~l~C~iC~~~l~~Pv------~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~~ 98 (269)
.+.+.|+||++.+..|+ ...+|||.||..|+.+| ...||.||.++..
T Consensus 8 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 63 (71)
T 3ng2_A 8 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 63 (71)
T ss_dssp TTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCC
T ss_pred CCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccCh
Confidence 36789999999998882 35699999999999998 5789999998763
No 36
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=98.74 E-value=8.7e-09 Score=70.59 Aligned_cols=45 Identities=27% Similarity=0.534 Sum_probs=39.5
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc---CCCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI---KRNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~ 97 (269)
+...|+||++.+..|+...+|||.||..|+.+| ...||.||.++.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 51 (68)
T 1chc_A 4 VAERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVE 51 (68)
T ss_dssp CCCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCC
T ss_pred CCCCCeeCCccccCCcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhH
Confidence 456899999999998656799999999999998 678999999876
No 37
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.74 E-value=6.3e-09 Score=74.87 Aligned_cols=44 Identities=39% Similarity=0.921 Sum_probs=38.9
Q ss_pred CeeeccCCCCCCcC----ceeeccCCceechhchhhc---C---CCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTV----PVFQCVNGHLACSDCCAKI---K---RNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~----Pv~~c~cgH~fC~~C~~~~---~---~~Cp~C~~~~~ 97 (269)
+.+.|+||++.+.. |+. .+|||.||..|+.+| . ..||.||..+.
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~-~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 67 (88)
T 2ct2_A 14 EVLECPICMESFTEEQLRPKL-LHCGHTICRQCLEKLLASSINGVRCPFCSKITR 67 (88)
T ss_dssp SCCBCTTTCCBCCTTSSCEEE-CSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBC
T ss_pred CCCCCccCCccccccCCCeEE-CCCCChhhHHHHHHHHHcCCCCcCCCCCCCccc
Confidence 67899999999998 885 599999999999998 2 58999999875
No 38
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.73 E-value=2.7e-09 Score=72.66 Aligned_cols=45 Identities=33% Similarity=0.741 Sum_probs=38.1
Q ss_pred CeeeccCCCC-CCcCce---eeccCCceechhchhhc----CCCCCCCCCCCc
Q 038068 53 DIFDCPICFE-PLTVPV---FQCVNGHLACSDCCAKI----KRNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~-~l~~Pv---~~c~cgH~fC~~C~~~~----~~~Cp~C~~~~~ 97 (269)
+++.|+||++ .+..|+ ...+|||+||..|+.+| ...||.||.++.
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 54 (65)
T 1g25_A 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLR 54 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCS
T ss_pred CCCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCccc
Confidence 5678999999 888884 24589999999999998 357999999876
No 39
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.72 E-value=9e-09 Score=68.10 Aligned_cols=39 Identities=33% Similarity=0.756 Sum_probs=34.3
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc------CCCCCCC
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI------KRNCPTC 92 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~------~~~Cp~C 92 (269)
+.+.|+||++.+..|+. .+|||+||..|+.+| ...||.|
T Consensus 14 ~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKEPVI-IECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSSCCC-CSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred cCCCCccCCcccCccEe-CCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 67899999999999985 699999999999988 2468887
No 40
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.69 E-value=8.8e-09 Score=84.18 Aligned_cols=62 Identities=21% Similarity=0.182 Sum_probs=52.6
Q ss_pred CCCeeeccCCCCCCcCceeeccCCceechhchhhc---C-CCCCCCCCCCcc---ccchhHHHHhhccee
Q 038068 51 DQDIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI---K-RNCPTCSSPTVI---VRNWAIEKVIELVQV 113 (269)
Q Consensus 51 ~~~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~---~-~~Cp~C~~~~~~---~~~~~l~~~i~~l~v 113 (269)
.++.|.||||++++.+||. .+|||+||..|+..| . ..||.|+.++.. .+|..+.+++..+.-
T Consensus 103 ip~~f~CPI~~elm~DPV~-~~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~~~~L~pN~~Lk~~Ie~~~~ 171 (179)
T 2f42_A 103 IPDYLCGKISFELMREPCI-TPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIPNLAMKEVIDAFIQ 171 (179)
T ss_dssp CCGGGBCTTTCSBCSSEEE-CTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCEECHHHHHHHHHHHH
T ss_pred CcHhhcccCccccCCCCeE-CCCCCEECHHHHHHHHHhCCCCCCCCcCCCChhhCcchHHHHHHHHHHHH
Confidence 3688999999999999996 599999999999998 2 359999998863 578889888887643
No 41
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=98.69 E-value=3.3e-09 Score=71.64 Aligned_cols=46 Identities=30% Similarity=0.719 Sum_probs=38.8
Q ss_pred CeeeccCCCCCCcCce------eeccCCceechhchhhc---CCCCCCCCCCCcc
Q 038068 53 DIFDCPICFEPLTVPV------FQCVNGHLACSDCCAKI---KRNCPTCSSPTVI 98 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv------~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~~ 98 (269)
+.+.|+||++.+..|. ...+|||.||..|+.+| ...||.||.++..
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 56 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 56 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTT
T ss_pred CCCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCc
Confidence 4578999999998871 35699999999999998 5689999998763
No 42
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.65 E-value=2.7e-08 Score=70.00 Aligned_cols=46 Identities=26% Similarity=0.543 Sum_probs=38.4
Q ss_pred CeeeccCCCCCCcCc--eeeccCCceechhchhhc---CCCCCCCCCCCcc
Q 038068 53 DIFDCPICFEPLTVP--VFQCVNGHLACSDCCAKI---KRNCPTCSSPTVI 98 (269)
Q Consensus 53 ~~l~C~iC~~~l~~P--v~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~~ 98 (269)
+.+.|+||++.+..+ +...+|||.||..|+.+| ...||+||..+..
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 64 (78)
T 2ect_A 14 SGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTG 64 (78)
T ss_dssp SSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCCC
T ss_pred CCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccCC
Confidence 567999999999865 334589999999999998 5689999998763
No 43
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=98.65 E-value=2.2e-08 Score=65.59 Aligned_cols=45 Identities=27% Similarity=0.567 Sum_probs=36.9
Q ss_pred CeeeccCCCCCCcC---ceeeccCCceechhchhhc---CCCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTV---PVFQCVNGHLACSDCCAKI---KRNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~---Pv~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~ 97 (269)
+...|+||++.+.. ++....|||.||..|+.+| ...||.||.++.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~~ 54 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEeE
Confidence 45789999999987 5543249999999999998 568999998763
No 44
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=98.64 E-value=2.6e-08 Score=65.10 Aligned_cols=45 Identities=31% Similarity=0.705 Sum_probs=37.2
Q ss_pred CeeeccCCCCCCcC---ceeeccCCceechhchhhc---CCCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTV---PVFQCVNGHLACSDCCAKI---KRNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~---Pv~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~ 97 (269)
+...|+||++.+.. ++...+|||.||..|+.+| ...||.||.++.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPSS 54 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSSC
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcCC
Confidence 45789999999865 2335689999999999998 578999998763
No 45
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=98.63 E-value=1e-08 Score=71.75 Aligned_cols=44 Identities=30% Similarity=0.718 Sum_probs=39.7
Q ss_pred CeeeccCCCCCCcCceeeccCCce-echhchhhcCCCCCCCCCCCcc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHL-ACSDCCAKIKRNCPTCSSPTVI 98 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~-fC~~C~~~~~~~Cp~C~~~~~~ 98 (269)
+.+.|+||++.+.+|++. +|||. ||..|+..| ..||.||.++..
T Consensus 23 ~~~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~-~~CP~Cr~~i~~ 67 (74)
T 4ic3_A 23 EEKLCKICMDRNIAIVFV-PCGHLVTCKQCAEAV-DKCPMCYTVITF 67 (74)
T ss_dssp HHTBCTTTSSSBCCEEEE-TTCCBCCCHHHHTTC-SBCTTTCCBCSE
T ss_pred cCCCCCCCCCCCCCEEEc-CCCChhHHHHhhhcC-ccCCCcCcCccC
Confidence 568999999999999965 99999 999999999 689999998763
No 46
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.62 E-value=2.5e-08 Score=69.50 Aligned_cols=46 Identities=24% Similarity=0.472 Sum_probs=38.4
Q ss_pred CeeeccCCCCCCcCce--eeccCCceechhchhhc---CCCCCCCCCCCcc
Q 038068 53 DIFDCPICFEPLTVPV--FQCVNGHLACSDCCAKI---KRNCPTCSSPTVI 98 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv--~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~~ 98 (269)
+...|+||++.+..+. ...+|||.||..|+.+| ...||.||.++..
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~~ 64 (74)
T 2ep4_A 14 LHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQ 64 (74)
T ss_dssp CSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCSS
T ss_pred CCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCccccc
Confidence 5678999999998663 33489999999999998 5689999998753
No 47
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=98.61 E-value=1.7e-08 Score=71.50 Aligned_cols=45 Identities=38% Similarity=0.894 Sum_probs=36.4
Q ss_pred CeeeccCCCCCCc--Ccee-eccCCceechhchhhc----CCCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLT--VPVF-QCVNGHLACSDCCAKI----KRNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~--~Pv~-~c~cgH~fC~~C~~~~----~~~Cp~C~~~~~ 97 (269)
+++.||||++++. ++.+ .|+|||.||..|+.++ ...||.||.++.
T Consensus 10 ~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~ 61 (78)
T 1e4u_A 10 DPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYP 61 (78)
T ss_dssp CCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCS
T ss_pred cCCcCCccCccCccccccccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccC
Confidence 6789999999985 3432 2459999999999887 357999999876
No 48
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.60 E-value=1.1e-08 Score=70.46 Aligned_cols=43 Identities=30% Similarity=0.617 Sum_probs=37.9
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc---CCCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI---KRNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~ 97 (269)
+.+.|+||++.+.. + ..+|||.||..|+.+| ...||.||.++.
T Consensus 14 ~~~~C~IC~~~~~~-~-~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 59 (70)
T 2ecn_A 14 DEEECCICMDGRAD-L-ILPCAHSFCQKCIDKWSDRHRNCPICRLQMT 59 (70)
T ss_dssp CCCCCSSSCCSCCS-E-EETTTEEECHHHHHHSSCCCSSCHHHHHCTT
T ss_pred CCCCCeeCCcCccC-c-ccCCCCcccHHHHHHHHHCcCcCCCcCCccc
Confidence 67899999999998 5 4699999999999998 468999998775
No 49
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=98.59 E-value=3.5e-08 Score=67.77 Aligned_cols=46 Identities=24% Similarity=0.426 Sum_probs=37.6
Q ss_pred CeeeccCCCCCCc--CceeeccCCceechhchhhc---CCCCCCCCCCCcc
Q 038068 53 DIFDCPICFEPLT--VPVFQCVNGHLACSDCCAKI---KRNCPTCSSPTVI 98 (269)
Q Consensus 53 ~~l~C~iC~~~l~--~Pv~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~~ 98 (269)
+...|+||++.+. .++...+|||.||..|+.+| ...||.||..+..
T Consensus 13 ~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 63 (69)
T 2kiz_A 13 TEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEA 63 (69)
T ss_dssp CCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSCS
T ss_pred CCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccccC
Confidence 5578999999885 23445689999999999998 5689999998753
No 50
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.57 E-value=3.4e-08 Score=69.04 Aligned_cols=46 Identities=20% Similarity=0.398 Sum_probs=38.8
Q ss_pred CeeeccCCCCCCcCc--eeeccCCceechhchhhc---CCCCCCCCCCCcc
Q 038068 53 DIFDCPICFEPLTVP--VFQCVNGHLACSDCCAKI---KRNCPTCSSPTVI 98 (269)
Q Consensus 53 ~~l~C~iC~~~l~~P--v~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~~ 98 (269)
+...|+||++.+..+ +...+|||.||..|+.+| ...||.||.++..
T Consensus 22 ~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~~ 72 (75)
T 1x4j_A 22 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSGP 72 (75)
T ss_dssp SCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCCC
T ss_pred CCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCCC
Confidence 567899999999877 334589999999999998 5789999988753
No 51
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=98.57 E-value=2.3e-08 Score=72.77 Aligned_cols=44 Identities=20% Similarity=0.441 Sum_probs=37.4
Q ss_pred CeeeccCCCCCCcC---ceeeccCCceechhchhhc---CCCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTV---PVFQCVNGHLACSDCCAKI---KRNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~---Pv~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~ 97 (269)
+...|+||++.+.. ++ ..+|||.||..|+..| ...||.||..+.
T Consensus 39 ~~~~C~IC~~~~~~~~~~~-~l~C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGDVAT-ELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 88 (91)
T ss_dssp SCSEETTTTEECCTTCEEE-EETTTEEEEHHHHHHHHTTTCBCTTTCCBSS
T ss_pred CCCCCcccChhhcCCCcEE-ecCCCChHHHHHHHHHHHcCCcCcCcCccCC
Confidence 56789999998876 55 4589999999999998 568999998764
No 52
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=98.56 E-value=2.7e-08 Score=85.44 Aligned_cols=60 Identities=25% Similarity=0.470 Sum_probs=49.1
Q ss_pred CCeeeccCCCCCCcCceeeccCCceechhchhhc--C---CCCCC--CCCCCcc---ccchhHHHHhhcc
Q 038068 52 QDIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI--K---RNCPT--CSSPTVI---VRNWAIEKVIELV 111 (269)
Q Consensus 52 ~~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~--~---~~Cp~--C~~~~~~---~~~~~l~~~i~~l 111 (269)
...+.||||+++|.+||....|||+||..|+..+ . ..||. |+..+.. ..|..|.++++.+
T Consensus 179 ~~el~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~~dL~pN~~L~~lve~~ 248 (267)
T 3htk_C 179 KIELTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSMRDFVRDPIMELRCKIA 248 (267)
T ss_dssp BCCSBCTTTSSBCSSEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEECGGGEEECHHHHHHHHHH
T ss_pred ceeeECcCccCcccCCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCchhhCCcCHHHHHHHHHH
Confidence 4789999999999999964589999999999987 1 36999 9987653 4677777777654
No 53
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.52 E-value=2.5e-08 Score=69.90 Aligned_cols=44 Identities=30% Similarity=0.730 Sum_probs=39.0
Q ss_pred CeeeccCCCCCCcCceeeccCCce-echhchhhcCCCCCCCCCCCcc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHL-ACSDCCAKIKRNCPTCSSPTVI 98 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~-fC~~C~~~~~~~Cp~C~~~~~~ 98 (269)
+.+.|+||++.+..|++ .+|||. ||..|+.++ ..||.||.++..
T Consensus 24 ~~~~C~IC~~~~~~~~~-~pCgH~~~C~~C~~~~-~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 24 EEKLCKICMDRNIAIVF-VPCGHLVTCKQCAEAV-DKCPMCYTVITF 68 (75)
T ss_dssp HHHSCSSSCSSCCCBCC-SSSCCCCBCHHHHHHC-SBCTTTCCBCCC
T ss_pred CCCCCCcCCCCCCCEEE-ecCCCHHHHHHHhhCC-CCCccCCceecC
Confidence 56789999999999996 599999 999999887 589999998763
No 54
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.49 E-value=1.1e-07 Score=65.35 Aligned_cols=44 Identities=23% Similarity=0.481 Sum_probs=38.9
Q ss_pred CeeeccCCCCCCcCceeeccCCce-echhchhhcCCCCCCCCCCCcc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHL-ACSDCCAKIKRNCPTCSSPTVI 98 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~-fC~~C~~~~~~~Cp~C~~~~~~ 98 (269)
+...|+||++...++++ .+|||. ||..|.... ..||+||.++..
T Consensus 14 ~~~~C~IC~~~~~~~v~-~pCgH~~~C~~C~~~~-~~CP~CR~~i~~ 58 (68)
T 2ea5_A 14 NSKDCVVCQNGTVNWVL-LPCRHTCLCDGCVKYF-QQCPMCRQFVQE 58 (68)
T ss_dssp CSSCCSSSSSSCCCCEE-TTTTBCCSCTTHHHHC-SSCTTTCCCCCC
T ss_pred CCCCCCCcCcCCCCEEE-ECCCChhhhHHHHhcC-CCCCCCCcchhc
Confidence 56789999999999986 599999 999999976 589999998763
No 55
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=98.45 E-value=4.3e-08 Score=75.66 Aligned_cols=45 Identities=31% Similarity=0.714 Sum_probs=39.8
Q ss_pred CeeeccCCCCCCcCc-------eeeccCCceechhchhhc---CCCCCCCCCCCcc
Q 038068 53 DIFDCPICFEPLTVP-------VFQCVNGHLACSDCCAKI---KRNCPTCSSPTVI 98 (269)
Q Consensus 53 ~~l~C~iC~~~l~~P-------v~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~~ 98 (269)
+.+.|+||++.+..| + ..+|||+||..|+.+| +..||.|+..+..
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~-~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 60 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIV-STECGHVFCSQCLRDSLKNANTCPTCRKKINH 60 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEE-EETTCCEEEHHHHHHHHTTCSBCTTTCCBCTT
T ss_pred CCCCCcccChhhhCccccccCeE-ecCCCChhhHHHHHHHHHhCCCCCCCCCcCcc
Confidence 678999999999988 6 5699999999999998 5689999998763
No 56
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.43 E-value=2e-07 Score=66.21 Aligned_cols=46 Identities=22% Similarity=0.333 Sum_probs=37.8
Q ss_pred CCeeeccCCCCCCcC--------------ceeeccCCceechhchhhc---CCCCCCCCCCCc
Q 038068 52 QDIFDCPICFEPLTV--------------PVFQCVNGHLACSDCCAKI---KRNCPTCSSPTV 97 (269)
Q Consensus 52 ~~~l~C~iC~~~l~~--------------Pv~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~ 97 (269)
.++..|+||++.+.. ++....|||.|+..|+.+| ...||+||.++.
T Consensus 13 ~~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~ 75 (81)
T 2ecl_A 13 VECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWV 75 (81)
T ss_dssp CCCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTCCBCTTTCCBCC
T ss_pred CCCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhCCCCCCcCCCcc
Confidence 356679999999976 4444469999999999998 568999999875
No 57
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=98.36 E-value=1.4e-07 Score=66.80 Aligned_cols=44 Identities=30% Similarity=0.712 Sum_probs=39.1
Q ss_pred CeeeccCCCCCCcCceeeccCCce-echhchhhcCCCCCCCCCCCcc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHL-ACSDCCAKIKRNCPTCSSPTVI 98 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~-fC~~C~~~~~~~Cp~C~~~~~~ 98 (269)
+...|+||++.+..|++. +|||. ||..|+..+. .||.||.++..
T Consensus 17 ~~~~C~IC~~~~~~~v~~-pCgH~~~C~~C~~~~~-~CP~Cr~~i~~ 61 (79)
T 2yho_A 17 EAMLCMVCCEEEINSTFC-PCGHTVCCESCAAQLQ-SCPVCRSRVEH 61 (79)
T ss_dssp HHTBCTTTSSSBCCEEEE-TTCBCCBCHHHHTTCS-BCTTTCCBCCE
T ss_pred CCCEeEEeCcccCcEEEE-CCCCHHHHHHHHHhcC-cCCCCCchhhC
Confidence 457899999999999975 99999 9999999984 89999998863
No 58
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=98.32 E-value=3e-07 Score=69.38 Aligned_cols=45 Identities=27% Similarity=0.414 Sum_probs=36.6
Q ss_pred CeeeccCCCCCCcCce-----------------eeccCCceechhchhhc--------CCCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTVPV-----------------FQCVNGHLACSDCCAKI--------KRNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv-----------------~~c~cgH~fC~~C~~~~--------~~~Cp~C~~~~~ 97 (269)
.+..|+||++.|..|. ...+|||.||..|+..| ...||+||..+.
T Consensus 24 ~~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~ 93 (114)
T 1v87_A 24 PEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYG 93 (114)
T ss_dssp CSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSS
T ss_pred CCCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccC
Confidence 4469999999997653 14589999999999988 247999998775
No 59
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=98.25 E-value=4.1e-07 Score=61.64 Aligned_cols=45 Identities=33% Similarity=0.699 Sum_probs=38.5
Q ss_pred CeeeccCCCCCCcCceee-ccCCce-echhchhhc---CCCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTVPVFQ-CVNGHL-ACSDCCAKI---KRNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~-c~cgH~-fC~~C~~~~---~~~Cp~C~~~~~ 97 (269)
+...|+||++...++++. .+|||. +|..|..++ ...||+||.++.
T Consensus 7 ~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~ 56 (64)
T 2vje_A 7 AIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQ 56 (64)
T ss_dssp GGSCCTTTSSSCSCEEEEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCC
T ss_pred CcCCCCcCCCCCCCEEEECCCCCChhhHHHHHHHHHHcCCcCCCcCcchh
Confidence 556899999999999852 389999 899999988 457999999875
No 60
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=98.20 E-value=5.6e-07 Score=69.31 Aligned_cols=47 Identities=30% Similarity=0.686 Sum_probs=40.6
Q ss_pred CCCeeeccCCCCCCcCc-------eeeccCCceechhchhhc---CCCCCCCCCCCcc
Q 038068 51 DQDIFDCPICFEPLTVP-------VFQCVNGHLACSDCCAKI---KRNCPTCSSPTVI 98 (269)
Q Consensus 51 ~~~~l~C~iC~~~l~~P-------v~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~~ 98 (269)
+.+.+.|+||++.+..| + .++|||.||..|+.+| ...||.||.++..
T Consensus 69 ~~~~~~C~iC~~~~~~~~~~~~~~~-~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 125 (133)
T 4ap4_A 69 GSGTVSCPICMDGYSEIVQNGRLIV-STECGHVFCSQCLRDSLKNANTCPTCRKKINH 125 (133)
T ss_dssp SSSSCBCTTTCCBHHHHHHTTCCEE-EETTSBEEEHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCCCCCCCccccccccCcceE-eCCCCChhhHHHHHHHHHcCCCCCCCCCcCCh
Confidence 44778999999999887 5 5799999999999998 6789999998763
No 61
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=98.15 E-value=1e-06 Score=80.11 Aligned_cols=45 Identities=27% Similarity=0.485 Sum_probs=39.4
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc----CCCCCCCCCCCcc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI----KRNCPTCSSPTVI 98 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~----~~~Cp~C~~~~~~ 98 (269)
....|+||.+.+..|+. .+|||.||..|+..| ...||.||.++..
T Consensus 331 ~~~~C~ICle~~~~pv~-lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~~ 379 (389)
T 2y1n_A 331 TFQLCKICAENDKDVKI-EPCGHLMCTSCLTSWQESEGQGCPFCRCEIKG 379 (389)
T ss_dssp SSSBCTTTSSSBCCEEE-ETTCCEECHHHHHHHHHHTCSBCTTTCCBCCE
T ss_pred CCCCCCccCcCCCCeEE-eCCCChhhHHHHHHHHhcCCCCCCCCCCccCC
Confidence 44799999999999985 599999999999987 4689999998764
No 62
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=98.14 E-value=8.6e-07 Score=59.85 Aligned_cols=45 Identities=22% Similarity=0.570 Sum_probs=37.5
Q ss_pred CeeeccCCCCCCcCcee-eccCCce-echhchhhc---CCCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTVPVF-QCVNGHL-ACSDCCAKI---KRNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~-~c~cgH~-fC~~C~~~~---~~~Cp~C~~~~~ 97 (269)
....|+||++...++++ ..+|||. +|..|..++ ...||+||.++.
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~ 55 (63)
T 2vje_B 6 LLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQ 55 (63)
T ss_dssp GGSBCTTTSSSBSCEEEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCC
T ss_pred cCCCCcccCCcCCCeEEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhh
Confidence 34589999999998864 2389998 999999988 358999999875
No 63
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=98.13 E-value=1.2e-06 Score=78.77 Aligned_cols=44 Identities=30% Similarity=0.742 Sum_probs=39.9
Q ss_pred CeeeccCCCCCCcCceeeccCCce-echhchhhcCCCCCCCCCCCcc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHL-ACSDCCAKIKRNCPTCSSPTVI 98 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~-fC~~C~~~~~~~Cp~C~~~~~~ 98 (269)
+.+.|+||++.+..|++. +|||. ||..|+..+ ..||.||.++..
T Consensus 294 ~~~~C~IC~~~~~~~v~l-pCgH~~fC~~C~~~~-~~CP~CR~~i~~ 338 (345)
T 3t6p_A 294 EERTCKVCMDKEVSVVFI-PCGHLVVCQECAPSL-RKCPICRGIIKG 338 (345)
T ss_dssp TTCBCTTTSSSBCCEEEE-TTCCEEECTTTGGGC-SBCTTTCCBCCE
T ss_pred CCCCCCccCCcCCceEEc-CCCChhHhHHHHhcC-CcCCCCCCCccC
Confidence 568999999999999975 99999 999999998 689999998763
No 64
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=98.10 E-value=1.9e-06 Score=64.36 Aligned_cols=46 Identities=20% Similarity=0.297 Sum_probs=38.4
Q ss_pred CeeeccCCCCCCcCc-----------------eeeccCCceechhchhhc---CCCCCCCCCCCcc
Q 038068 53 DIFDCPICFEPLTVP-----------------VFQCVNGHLACSDCCAKI---KRNCPTCSSPTVI 98 (269)
Q Consensus 53 ~~l~C~iC~~~l~~P-----------------v~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~~ 98 (269)
++-.|+||++.+..+ +...+|||.|+..|+.+| ...||+||..+..
T Consensus 36 ~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~~~~ 101 (106)
T 3dpl_R 36 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEF 101 (106)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBCCE
T ss_pred CCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCccee
Confidence 556899999998865 445689999999999998 5689999998653
No 65
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=98.03 E-value=3.1e-06 Score=59.13 Aligned_cols=60 Identities=18% Similarity=0.341 Sum_probs=49.6
Q ss_pred HhhcceecccCCCCCccccccccchhhhhc-cCCCeeeeCCCCCCCCccChhHHhhhhhhhCCCCcc
Q 038068 107 VIELVQVNCKNAEYGCQQKMSFSKKRGHEK-TCQHSPLPCPLSDCSFLGCSSQFVRHFMAKHNISAV 172 (269)
Q Consensus 107 ~i~~l~v~C~~~~~GC~~~~~~~~~~~He~-~C~~~p~~Cp~~~C~~~g~~~~l~~Hl~~~H~~~~~ 172 (269)
......|.||+ +|...+...++++|+. +|+++++.|++ |+..+.+.+|..|. ..+....+
T Consensus 11 ~C~~~~v~C~~---~C~~~v~r~~l~~H~~~~C~~r~v~C~~--C~~~~~~~~l~~H~-~~Cp~~~v 71 (76)
T 2yuc_A 11 TCSFNVIPCPN---RCPMKLSRRDLPAHLQHDCPKRRLKCEF--CGCDFSGEAYESHE-GMCPQESS 71 (76)
T ss_dssp CCCCSCCBCTT---CCSCBCCSSSSTTTTTTSCTTSCCCCSS--SCCCCCHHHHHHTT-TSCTTSSC
T ss_pred HCCCcccCCCc---cccHHhhHhHHHhhCHhhCCCcceECCC--CCCccCHHHHHHHH-hHCCCCcc
Confidence 34456788986 7999999999999988 89999999996 99999999999998 44554433
No 66
>2yre_A F-box only protein 30; zinc binding, E3 ubiquitin ligase, SCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.02 E-value=2.2e-06 Score=62.57 Aligned_cols=51 Identities=22% Similarity=0.456 Sum_probs=39.4
Q ss_pred eecccCCCCCccccccccchhhhhccCCCeeeeCCCC--CCCCccChhHHhhhhhh
Q 038068 112 QVNCKNAEYGCQQKMSFSKKRGHEKTCQHSPLPCPLS--DCSFLGCSSQFVRHFMA 165 (269)
Q Consensus 112 ~v~C~~~~~GC~~~~~~~~~~~He~~C~~~p~~Cp~~--~C~~~g~~~~l~~Hl~~ 165 (269)
.+.||| .|...+...++++|...|+.+.+.|++. ||.+++.+.+|.+|++.
T Consensus 37 ~i~CP~---~Cga~i~rckL~EH~~~CP~a~v~C~~~~yGCp~~~~R~~L~~He~~ 89 (100)
T 2yre_A 37 LIGCPL---VCGAVFHSCKADEHRLLCPFERVPCLNSDFGCPFTMARNKVAEHLEM 89 (100)
T ss_dssp EEECTT---CCSCEEEHHHHHHHHHHCSSSEEECTTTTTTCCCEEESSTHHHHHHT
T ss_pred eeeCCc---ccCCeeehhhHHHHHhhcccccccccccCcCCceeecHHHHHHHHhh
Confidence 677876 4777777778888887788888888875 78888888888888763
No 67
>2yre_A F-box only protein 30; zinc binding, E3 ubiquitin ligase, SCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.01 E-value=2.2e-06 Score=62.60 Aligned_cols=59 Identities=22% Similarity=0.404 Sum_probs=46.3
Q ss_pred CCC-CCCCCCccccchhHHHHhhcceecccCCCCCccccccccchhhhhccCCCeeeeCC
Q 038068 88 NCP-TCSSPTVIVRNWAIEKVIELVQVNCKNAEYGCQQKMSFSKKRGHEKTCQHSPLPCP 146 (269)
Q Consensus 88 ~Cp-~C~~~~~~~~~~~l~~~i~~l~v~C~~~~~GC~~~~~~~~~~~He~~C~~~p~~Cp 146 (269)
.|| .|...+-...-.....+.....++|+|+.|||..++...+|..|++.|+-+.+.|.
T Consensus 39 ~CP~~Cga~i~rckL~EH~~~CP~a~v~C~~~~yGCp~~~~R~~L~~He~~CPas~v~~~ 98 (100)
T 2yre_A 39 GCPLVCGAVFHSCKADEHRLLCPFERVPCLNSDFGCPFTMARNKVAEHLEMCPASVSGPS 98 (100)
T ss_dssp ECTTCCSCEEEHHHHHHHHHHCSSSEEECTTTTTTCCCEEESSTHHHHHHTCGGGCCCCC
T ss_pred eCCcccCCeeehhhHHHHHhhcccccccccccCcCCceeecHHHHHHHHhhCCceeEecC
Confidence 477 67663332222334456788899999999999999999999999999999888775
No 68
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=98.00 E-value=2.8e-06 Score=56.98 Aligned_cols=43 Identities=16% Similarity=0.161 Sum_probs=37.8
Q ss_pred eeeccCCCCCCcCceeec-cCCceechhchhhc---CCCCCCCCCCCc
Q 038068 54 IFDCPICFEPLTVPVFQC-VNGHLACSDCCAKI---KRNCPTCSSPTV 97 (269)
Q Consensus 54 ~l~C~iC~~~l~~Pv~~c-~cgH~fC~~C~~~~---~~~Cp~C~~~~~ 97 (269)
.+.|||+++++.+||. . .+||+|+..|+.+| ...||..+.++.
T Consensus 3 ~~~CpIs~~~m~dPV~-~~~sG~~yer~~I~~~l~~~~~cP~t~~~L~ 49 (61)
T 2bay_A 3 HMLCAISGKVPRRPVL-SPKSRTIFEKSLLEQYVKDTGNDPITNEPLS 49 (61)
T ss_dssp -CCCTTTCSCCSSEEE-ETTTTEEEEHHHHHHHHHHHSBCTTTCCBCC
T ss_pred eEEecCCCCCCCCCEE-eCCCCcEEcHHHHHHHHHhCCCCcCCcCCCC
Confidence 4789999999999985 6 89999999999999 457999998876
No 69
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.95 E-value=2.6e-06 Score=62.09 Aligned_cols=43 Identities=19% Similarity=0.531 Sum_probs=34.2
Q ss_pred CeeeccCCCCCCcCceee--ccCCceechhchhhc-----------CCCCCC--CCCC
Q 038068 53 DIFDCPICFEPLTVPVFQ--CVNGHLACSDCCAKI-----------KRNCPT--CSSP 95 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~--c~cgH~fC~~C~~~~-----------~~~Cp~--C~~~ 95 (269)
+.+.|+||++.+..|... .+|||.||..|+... ...||. |+..
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CCcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 568999999999988643 269999999998765 125888 8776
No 70
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=97.92 E-value=1.8e-06 Score=60.34 Aligned_cols=51 Identities=20% Similarity=0.398 Sum_probs=46.0
Q ss_pred ccchhhhhccCCCeeeeCCCCCCCCccChhHHhhhhhhhCCCCccceeecce
Q 038068 128 FSKKRGHEKTCQHSPLPCPLSDCSFLGCSSQFVRHFMAKHNISAVPFKYNSL 179 (269)
Q Consensus 128 ~~~~~~He~~C~~~p~~Cp~~~C~~~g~~~~l~~Hl~~~H~~~~~~~~~~~~ 179 (269)
..+++.|+..|+|+++.||+ +|+..+.+.+|.+|+...+....+.+.|+..
T Consensus 2 ~~~l~~H~~~C~~~~v~C~~-~C~~~v~r~~l~~H~~~~C~~r~v~C~~C~~ 52 (76)
T 2yuc_A 2 SSGSSGHLNTCSFNVIPCPN-RCPMKLSRRDLPAHLQHDCPKRRLKCEFCGC 52 (76)
T ss_dssp CCSCSCCCCCCCCSCCBCTT-CCSCBCCSSSSTTTTTTSCTTSCCCCSSSCC
T ss_pred chHHHHHHHHCCCcccCCCc-cccHHhhHhHHHhhCHhhCCCcceECCCCCC
Confidence 35788999999999999997 8999999999999999899999999988753
No 71
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=97.79 E-value=3.6e-06 Score=63.97 Aligned_cols=45 Identities=20% Similarity=0.296 Sum_probs=1.0
Q ss_pred CeeeccCCCCCCcCc-----------------eeeccCCceechhchhhc---CCCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTVP-----------------VFQCVNGHLACSDCCAKI---KRNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~P-----------------v~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~ 97 (269)
++-.|+||++.+..+ +...+|+|.|+..|+.+| ...||+||.++.
T Consensus 47 ~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~~~ 111 (117)
T 4a0k_B 47 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWE 111 (117)
T ss_dssp CC---------------------------------------------------------------
T ss_pred CCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCeee
Confidence 456899999999764 323479999999999998 568999998764
No 72
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=97.75 E-value=3.8e-05 Score=55.90 Aligned_cols=82 Identities=21% Similarity=0.359 Sum_probs=58.4
Q ss_pred eccCCCCCCcCceeeccCCceechhchhhc----CCCCCCCCCCCccccchhHHHHhhcceecccCCCCCccccccccch
Q 038068 56 DCPICFEPLTVPVFQCVNGHLACSDCCAKI----KRNCPTCSSPTVIVRNWAIEKVIELVQVNCKNAEYGCQQKMSFSKK 131 (269)
Q Consensus 56 ~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~----~~~Cp~C~~~~~~~~~~~l~~~i~~l~v~C~~~~~GC~~~~~~~~~ 131 (269)
.|++|.-|+..-...-+|.|+||.+|...+ ...||.|+.++....... ..-.+-|+.
T Consensus 3 fC~~C~~Pi~iygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~rVe~~~-----~~~if~C~~-------------- 63 (101)
T 3vk6_A 3 FCDKCGLPIKVYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRIEQCT-----RGSLFMCSI-------------- 63 (101)
T ss_dssp BCTTTCSBCSEEEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCSEEEEEE-----GGGCCCCCC--------------
T ss_pred ecCccCCCeEEEeeeccccccHHHHHHHHHHhccCCCCcCcCCeeeeeEEec-----cCCEEECCC--------------
Confidence 599999999877667799999999999876 367999999876443221 122233431
Q ss_pred hhhhccCCCeeeeCCCCCCCCc-cChhHHhhhhhhhCCCCc
Q 038068 132 RGHEKTCQHSPLPCPLSDCSFL-GCSSQFVRHFMAKHNISA 171 (269)
Q Consensus 132 ~~He~~C~~~p~~Cp~~~C~~~-g~~~~l~~Hl~~~H~~~~ 171 (269)
.++|.-. .+..+|+.|+...|....
T Consensus 64 ---------------~~~CkrtyLs~rdlqaHI~~~H~~~~ 89 (101)
T 3vk6_A 64 ---------------VQGCKRTYLSQRDLQAHINHRHMRAG 89 (101)
T ss_dssp ---------------CCCCCCCCSSHHHHHHHHHHHTTTSC
T ss_pred ---------------CCCHHHHhcCHHHHHHHHHHHhhhcC
Confidence 3466644 467899999999997643
No 73
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=97.53 E-value=4.9e-05 Score=61.22 Aligned_cols=101 Identities=17% Similarity=0.238 Sum_probs=67.5
Q ss_pred eccCCCCCCcCceeeccCCceechhchhhcCCCCC--CCCCCCccccchhHHHHhhcceecccCCCCCccccccccchhh
Q 038068 56 DCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCP--TCSSPTVIVRNWAIEKVIELVQVNCKNAEYGCQQKMSFSKKRG 133 (269)
Q Consensus 56 ~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~~~~Cp--~C~~~~~~~~~~~l~~~i~~l~v~C~~~~~GC~~~~~~~~~~~ 133 (269)
.||+|...+...-.. +. .+-..=+..+...|| .|...+....-...++...-..+.|| ||.+.+...++..
T Consensus 55 ~CP~Cr~~~~~~~~~-~~--~~~~~~i~~l~v~C~n~GC~~~~~~~~l~~H~~~C~~~~v~C~----~C~~~~~r~~l~~ 127 (170)
T 3hcs_A 55 KCPVDNEILLENQLF-PD--NFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMDCP----QCQRPFQKFHINI 127 (170)
T ss_dssp BCTTTCCBCCGGGCE-EC--HHHHHHHHTSEEECCSTTCCCEEEGGGHHHHHTTCTTSEEECT----TTCCEEEGGGHHH
T ss_pred CCCCCccCcchhhhh-hh--HHHHHHHhhcccCCCCCCCCceecHhHHHHHHhcCCceeeECC----CCChHHHHHHHHH
Confidence 788888776543100 00 000011111233564 46655443332334455666788997 8999999999999
Q ss_pred hh-ccCCCeeeeCCCCCCCCccChhHHhhhhhh
Q 038068 134 HE-KTCQHSPLPCPLSDCSFLGCSSQFVRHFMA 165 (269)
Q Consensus 134 He-~~C~~~p~~Cp~~~C~~~g~~~~l~~Hl~~ 165 (269)
|+ ..|+++++.|+ .|+......+|..|...
T Consensus 128 H~~~~C~~r~~~C~--~C~~~~~~~~l~~H~~~ 158 (170)
T 3hcs_A 128 HILKDCPRRQVSCD--NCAASMAFEDKEIHDQN 158 (170)
T ss_dssp HHHHTCTTCEEECT--TTCCEEEGGGHHHHHTT
T ss_pred HhhhhCCCCCeECC--CCCCccCHHHHHhHHHh
Confidence 98 69999999999 59999999999999754
No 74
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.02 E-value=0.00068 Score=47.71 Aligned_cols=44 Identities=20% Similarity=0.389 Sum_probs=34.9
Q ss_pred CeeeccCCCCCC--cCceeeccCC-----ceechhchhhc---C--CCCCCCCCCCc
Q 038068 53 DIFDCPICFEPL--TVPVFQCVNG-----HLACSDCCAKI---K--RNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l--~~Pv~~c~cg-----H~fC~~C~~~~---~--~~Cp~C~~~~~ 97 (269)
+...|.||++.+ ..++. .+|. |.|-..|+.+| + ..||+|+..+.
T Consensus 14 ~~~~C~IC~~~~~~~~~l~-~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~ 69 (80)
T 2d8s_A 14 SQDICRICHCEGDDESPLI-TPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFI 69 (80)
T ss_dssp TSCCCSSSCCCCCSSSCEE-CSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCC
T ss_pred CCCCCeEcCccccCCCeeE-eccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeee
Confidence 456899999866 35664 4775 99999999999 2 48999999875
No 75
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.89 E-value=0.00016 Score=50.11 Aligned_cols=52 Identities=21% Similarity=0.316 Sum_probs=43.9
Q ss_pred hcceecccCCCCCccccccccchhhhhccCCCeeeeCCCCCCCCccChhHHhhhhhhh
Q 038068 109 ELVQVNCKNAEYGCQQKMSFSKKRGHEKTCQHSPLPCPLSDCSFLGCSSQFVRHFMAK 166 (269)
Q Consensus 109 ~~l~v~C~~~~~GC~~~~~~~~~~~He~~C~~~p~~Cp~~~C~~~g~~~~l~~Hl~~~ 166 (269)
...++.|++ |...+...+|..|+..|+.+|+.|+. |+....+.+|..|....
T Consensus 14 ~~r~~~C~~----C~~~~~~~~L~~H~~~c~~~~~~C~~--C~~~~~~~~l~~H~~~c 65 (75)
T 2d9k_A 14 PLRLAVCQH----CDLELSILKLKEHEDYCGARTELCGN--CGRNVLVKDLKTHPEVC 65 (75)
T ss_dssp CCCCEECSS----SCCEECHHHHHHHHHHHHHCEEECSS--SCCEEETTGGGTHHHHB
T ss_pred CCcccCCcc----cChHhhHHHHHHHHhHcCCCceEccc--CCCcCcHHHHHHHHHHc
Confidence 345677774 88899999999999899999999995 99888889999998653
No 76
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.57 E-value=0.0042 Score=42.95 Aligned_cols=44 Identities=27% Similarity=0.498 Sum_probs=36.9
Q ss_pred CeeeccCCCCCCcCceeec-cCCceechhchhhc---C--CCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTVPVFQC-VNGHLACSDCCAKI---K--RNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c-~cgH~fC~~C~~~~---~--~~Cp~C~~~~~ 97 (269)
..-.|.||.+++.+-+ .| .|+|.|=..|+.+| . ..||.|+.++.
T Consensus 14 ~i~~C~IC~~~i~~g~-~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~ 63 (74)
T 2ct0_A 14 AVKICNICHSLLIQGQ-SCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWP 63 (74)
T ss_dssp SSCBCSSSCCBCSSSE-ECSSSCCEECHHHHHHHSTTCSSCCCTTTCSCCC
T ss_pred CCCcCcchhhHcccCC-ccCCCCchhhHHHHHHHHHhcCCCCCCCCcCcCC
Confidence 4468999999998665 56 69999999999998 3 67999998765
No 77
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=95.91 E-value=0.0031 Score=56.09 Aligned_cols=45 Identities=22% Similarity=0.501 Sum_probs=37.2
Q ss_pred CeeeccCCCCCCcC----ceeec---cCCceechhchhhc----C----------CCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTV----PVFQC---VNGHLACSDCCAKI----K----------RNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~----Pv~~c---~cgH~fC~~C~~~~----~----------~~Cp~C~~~~~ 97 (269)
..-.|+||++.+.+ |-..| .|||.|=..|+.+| . ..||.|+.++.
T Consensus 307 ~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs 372 (381)
T 3k1l_B 307 EELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLS 372 (381)
T ss_dssp SCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEE
T ss_pred CCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCC
Confidence 45689999999876 65556 59999999999998 1 46999999876
No 78
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=95.04 E-value=0.012 Score=42.80 Aligned_cols=32 Identities=22% Similarity=0.502 Sum_probs=26.8
Q ss_pred CeeeccCCCC-CCcCceeec-cCCceechhchhh
Q 038068 53 DIFDCPICFE-PLTVPVFQC-VNGHLACSDCCAK 84 (269)
Q Consensus 53 ~~l~C~iC~~-~l~~Pv~~c-~cgH~fC~~C~~~ 84 (269)
+++.|++|.+ ++.+|+..| .|+|.||..|+..
T Consensus 2 ee~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~ 35 (101)
T 2jun_A 2 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKA 35 (101)
T ss_dssp CCCBCTTCCSSSCCBCCEEETTTTEEECHHHHHH
T ss_pred CCCCCcCCCCCCCCCceEECCcCChHHhHHHCHH
Confidence 4578999996 478888654 6999999999997
No 79
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.10 E-value=0.0094 Score=40.89 Aligned_cols=48 Identities=17% Similarity=0.169 Sum_probs=38.7
Q ss_pred cchhhhhc-cCCCeeeeCCCCCCCCccChhHHhhhhhhhCCCCccceeecce
Q 038068 129 SKKRGHEK-TCQHSPLPCPLSDCSFLGCSSQFVRHFMAKHNISAVPFKYNSL 179 (269)
Q Consensus 129 ~~~~~He~-~C~~~p~~Cp~~~C~~~g~~~~l~~Hl~~~H~~~~~~~~~~~~ 179 (269)
.+|..|+. .|+++|+.|++ |+......+|..|. .......+.+.++..
T Consensus 3 ~~L~~H~~~~c~~r~~~C~~--C~~~~~~~~L~~H~-~~c~~~~~~C~~C~~ 51 (75)
T 2d9k_A 3 SGSSGHEETECPLRLAVCQH--CDLELSILKLKEHE-DYCGARTELCGNCGR 51 (75)
T ss_dssp CCCSCCCCCCCCCCCEECSS--SCCEECHHHHHHHH-HHHHHCEEECSSSCC
T ss_pred hHHHhhCcccCCCcccCCcc--cChHhhHHHHHHHH-hHcCCCceEcccCCC
Confidence 46789986 79999999995 99999999999998 556666666666643
No 80
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=93.06 E-value=0.034 Score=41.52 Aligned_cols=63 Identities=13% Similarity=0.054 Sum_probs=40.5
Q ss_pred hHHHHhhcceecccCCCCCccccccccchhhh---hccCCCeeeeCCCCCCCCccChhHHhhhhhhhCCC
Q 038068 103 AIEKVIELVQVNCKNAEYGCQQKMSFSKKRGH---EKTCQHSPLPCPLSDCSFLGCSSQFVRHFMAKHNI 169 (269)
Q Consensus 103 ~l~~~i~~l~v~C~~~~~GC~~~~~~~~~~~H---e~~C~~~p~~Cp~~~C~~~g~~~~l~~Hl~~~H~~ 169 (269)
.+.+.+..-...||. |...+...++..- ++.=.-..+.||+.||+|.+...+|.+|+...+..
T Consensus 44 Ci~~~~~~~~~~CP~----Cr~~~~~~~~~~~~~l~~~i~~l~v~C~n~gC~~~~~~~~l~~H~~~c~~~ 109 (118)
T 3hct_A 44 CIIKSIRDAGHKCPV----DNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFA 109 (118)
T ss_dssp HHHHHHHHHCSBCTT----TCCBCCGGGCEECHHHHHHHHTSEEECSSTTCCCEEEGGGSGGGTSSSCC-
T ss_pred HHHHHHhhCCCCCCC----CCCCcCHHhcccCHHHHHHHccceeECCCCCCCCEEeeHHHHHHHHHchhh
Confidence 345555544458985 7666554332100 11122357899988999999999999999877654
No 81
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.79 E-value=0.093 Score=34.24 Aligned_cols=53 Identities=21% Similarity=0.528 Sum_probs=37.0
Q ss_pred ceecccCCCCCccccccccchhhhhccCCCeeeeCCCCCCCCc-cChhHHhhhhhhhCC
Q 038068 111 VQVNCKNAEYGCQQKMSFSKKRGHEKTCQHSPLPCPLSDCSFL-GCSSQFVRHFMAKHN 168 (269)
Q Consensus 111 l~v~C~~~~~GC~~~~~~~~~~~He~~C~~~p~~Cp~~~C~~~-g~~~~l~~Hl~~~H~ 168 (269)
-++.|+. |...+....|..|++.+.-+|+.|++ .|+.. ..+..|..|.+....
T Consensus 9 ~~~~C~~----C~k~f~~~~L~~H~~~~~~~p~~C~~-~C~k~f~~~~~L~~H~~~hc~ 62 (66)
T 2eod_A 9 RTQPCTY----CTKEFVFDTIQSHQYQCPRLPVACPN-QCGVGTVAREDLPGHLKDSCN 62 (66)
T ss_dssp CEEECSS----SCCEEEHHHHHHHHHHCSSSEEECTT-CCSCCEEETTTHHHHHHTTSS
T ss_pred CCeeccc----cCCccCHHHHHHHHHHcCCcCccCCc-ccCcccccHHHHHHHHHhhcc
Confidence 3456653 66666666788887778888999983 48865 345688899876443
No 82
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=91.36 E-value=0.16 Score=37.57 Aligned_cols=76 Identities=13% Similarity=0.271 Sum_probs=47.6
Q ss_pred CCCCCCCCCCcc---------ccchhHHHHhhcceecccCCCCCccccccccchh----hhhccCCCeeeeCCCCCCCCc
Q 038068 87 RNCPTCSSPTVI---------VRNWAIEKVIELVQVNCKNAEYGCQQKMSFSKKR----GHEKTCQHSPLPCPLSDCSFL 153 (269)
Q Consensus 87 ~~Cp~C~~~~~~---------~~~~~l~~~i~~l~v~C~~~~~GC~~~~~~~~~~----~He~~C~~~p~~Cp~~~C~~~ 153 (269)
..||+|...+.. +-..-+.+.+......||. |...+...++. .-.+.=....+.||+.||+|.
T Consensus 24 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~----Cr~~~~~~~~~~~~~~l~~~i~~l~v~C~~~gC~~~ 99 (116)
T 1rmd_A 24 ISCQICEHILADPVETSCKHLFCRICILRCLKVMGSYCPS----CRYPCFPTDLESPVKSFLNILNSLMVKCPAQDCNEE 99 (116)
T ss_dssp TBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTCSBCTT----TCCBCCGGGCBCCCHHHHHHHHHCEEECCSTTCCCE
T ss_pred CCCCCCCcHhcCcEEcCCCCcccHHHHHHHHhHCcCcCCC----CCCCCCHhhccccHHHHHHHHHHhcCCCCCCCCcch
Confidence 468888765531 1113355555544567885 77666554432 112222334688998999999
Q ss_pred cChhHHhhhhhhh
Q 038068 154 GCSSQFVRHFMAK 166 (269)
Q Consensus 154 g~~~~l~~Hl~~~ 166 (269)
+...++..|+...
T Consensus 100 ~~~~~~~~H~~~C 112 (116)
T 1rmd_A 100 VSLEKYNHHVSSH 112 (116)
T ss_dssp EEHHHHHHHHHTS
T ss_pred hhHhHHHHHHHHh
Confidence 9999999999653
No 83
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=90.48 E-value=0.76 Score=31.73 Aligned_cols=33 Identities=30% Similarity=0.598 Sum_probs=26.9
Q ss_pred CeeeccCCCCCCcCc-eeecc--CCceechhchhhc
Q 038068 53 DIFDCPICFEPLTVP-VFQCV--NGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~P-v~~c~--cgH~fC~~C~~~~ 85 (269)
..|.|.+|.+-|.+. ..||+ -+|.||-.|....
T Consensus 14 a~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~s 49 (93)
T 2cs3_A 14 GPLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRES 49 (93)
T ss_dssp CSCCCSSSCSCCSSTTSEECSSCSSCEECHHHHHHH
T ss_pred CeeEeecchhhhccCceeeCCCccCCeeeccccHHH
Confidence 679999999999877 44786 5799999997553
No 84
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=87.21 E-value=0.39 Score=31.34 Aligned_cols=44 Identities=23% Similarity=0.330 Sum_probs=30.9
Q ss_pred CeeeccCCCCCCcCceeecc--CCc---eechhchhhc-----CCCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTVPVFQCV--NGH---LACSDCCAKI-----KRNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~--cgH---~fC~~C~~~~-----~~~Cp~C~~~~~ 97 (269)
+.-.|.||++-..+++. .+ |.+ .|=..|+.+| ...||+|+..+.
T Consensus 5 ~~~~CrIC~~~~~~~l~-~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~ 58 (60)
T 1vyx_A 5 DVPVCWICNEELGNERF-RACGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp SCCEETTTTEECSCCCC-CSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCEeEEeecCCCCcee-cCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeee
Confidence 45689999876655552 35 434 5556799998 367999998764
No 85
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=86.92 E-value=0.85 Score=31.92 Aligned_cols=33 Identities=15% Similarity=0.273 Sum_probs=23.9
Q ss_pred CeeeccCCCCCCc----Cceeecc-CCceechhchhhc
Q 038068 53 DIFDCPICFEPLT----VPVFQCV-NGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~----~Pv~~c~-cgH~fC~~C~~~~ 85 (269)
...-||-|..++. .+..+|+ ||+.||..|...|
T Consensus 24 ~~~wCP~C~~~~~~~~~~~~v~C~~C~~~FC~~C~~~w 61 (86)
T 2ct7_A 24 KFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQW 61 (86)
T ss_dssp CEECCSSSCCCEECCCSCSCEECTTTCCEECSSSCSBC
T ss_pred CEeECcCCCchheecCCCCceEeCCCCCccccccCCch
Confidence 4445998887553 2223686 9999999999877
No 86
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=86.66 E-value=0.61 Score=36.90 Aligned_cols=84 Identities=18% Similarity=0.328 Sum_probs=44.6
Q ss_pred CCCCCCCCCccccch--hHHHHhhcceecccCCCCCccccccc-cchhhhhcc-CCCeeeeCCCCCCCCccC-hhHHhhh
Q 038068 88 NCPTCSSPTVIVRNW--AIEKVIELVQVNCKNAEYGCQQKMSF-SKKRGHEKT-CQHSPLPCPLSDCSFLGC-SSQFVRH 162 (269)
Q Consensus 88 ~Cp~C~~~~~~~~~~--~l~~~i~~l~v~C~~~~~GC~~~~~~-~~~~~He~~-C~~~p~~Cp~~~C~~~g~-~~~l~~H 162 (269)
.|+.|...+....+. -+..-...-.+.|+. |...+.. ..|..|++. -.-.++.|+ .|+.... ...|..|
T Consensus 79 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H 152 (190)
T 2i13_A 79 KCPECGKSFSQRANLRAHQRTHTGEKPYACPE----CGKSFSQLAHLRAHQRTHTGEKPYKCP--ECGKSFSREDNLHTH 152 (190)
T ss_dssp ECTTTCCEESCHHHHHHHHHHHHTCCCEECTT----TCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHHHH
T ss_pred cCcccCCccCCHHHHHHHHHhcCCCCCCcCCC----CCCccCCHHHHHHHHHHhCCCCCeECC--CCCcccCCHHHHHHH
Confidence 577776655432111 111222344566763 6665543 456666543 234567777 3776543 4577788
Q ss_pred hhhhCCCCccceeec
Q 038068 163 FMAKHNISAVPFKYN 177 (269)
Q Consensus 163 l~~~H~~~~~~~~~~ 177 (269)
+...+......+.++
T Consensus 153 ~~~H~~~~~~~C~~C 167 (190)
T 2i13_A 153 QRTHTGEKPYKCPEC 167 (190)
T ss_dssp HHHHHCCCCEECTTT
T ss_pred HHhcCCCCCeECCCC
Confidence 776665544444433
No 87
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=86.45 E-value=0.49 Score=33.79 Aligned_cols=45 Identities=24% Similarity=0.696 Sum_probs=36.8
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc-CCCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI-KRNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~-~~~Cp~C~~~~~ 97 (269)
+=|.|..|..+|....+.-.-|..+|..|..+. ...|..|..+|.
T Consensus 32 ~CF~C~~C~~~L~~~~~~~~~g~~yC~~cy~~~~~~~C~~C~~~I~ 77 (101)
T 2cup_A 32 TCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKAIV 77 (101)
T ss_dssp TTCCCSSSCCCTTSSCCEEETTEEECHHHHTTCCCCBCSSSCCBCC
T ss_pred cCCcccccCCCCCcCeeECcCCEEEChhHhhhhcCCccccCCCccc
Confidence 568899999999765444468999999999877 678999988775
No 88
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=86.04 E-value=0.57 Score=32.31 Aligned_cols=54 Identities=15% Similarity=0.244 Sum_probs=36.0
Q ss_pred ceecccCCCCCccccccc-cchhhhhccCCC---eeeeCCCCCCCCcc-ChhHHhhhhhhhCCCC
Q 038068 111 VQVNCKNAEYGCQQKMSF-SKKRGHEKTCQH---SPLPCPLSDCSFLG-CSSQFVRHFMAKHNIS 170 (269)
Q Consensus 111 l~v~C~~~~~GC~~~~~~-~~~~~He~~C~~---~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~ 170 (269)
..+.|+. |...+.. ..|..|+..-.- .++.|+. |+... ....|..|++..|..+
T Consensus 34 ~~~~C~~----C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~ 92 (95)
T 2yt9_A 34 KPYSCPV----CGLRFKRKDRMSYHVRSHDGSVGKPYICQS--CGKGFSRPDHLNGHIKQVHSGP 92 (95)
T ss_dssp CSEECSS----SCCEESCHHHHHHHHHHHCCCCCSSBCCSS--SCCCBSSHHHHHHHHHHTSCCC
T ss_pred CCCcCCC----CCCccCCHHHHHHHHHHhcCCCCCceECCC--ccchhCCHHHHHHHHHHhcCCC
Confidence 3456663 6655543 466777654332 6788984 98765 4578999999888754
No 89
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=86.02 E-value=1.1 Score=32.34 Aligned_cols=108 Identities=18% Similarity=0.297 Sum_probs=64.9
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhcCCCCCCCCCCCccccchhHHHH-----hhcceecccCCCCCcccccc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVRNWAIEKV-----IELVQVNCKNAEYGCQQKMS 127 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~~~~Cp~C~~~~~~~~~~~l~~~-----i~~l~v~C~~~~~GC~~~~~ 127 (269)
..+.|++|...|.....+ -.|.- .-...-...|+.|...+........-.. .....+.|+. |...+.
T Consensus 6 ~~~~C~~C~~~f~~~~~l--~~H~~--~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~----C~~~f~ 77 (124)
T 2dlq_A 6 SGVECPTCHKKFLSKYYL--KVHNR--KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSV----CQETFR 77 (124)
T ss_dssp SSCCCTTTCCCCSSHHHH--HHHHH--HHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSS----SCCEES
T ss_pred CCCCCCCCCCcCCCHHHH--HHHHH--hCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCC----CCCccC
Confidence 457899998888765321 12321 0000113579999877653322211111 2344577874 877665
Q ss_pred c-cchhhhhcc-CCCeeeeCCCCCCCCcc-ChhHHhhhhhhhCCCC
Q 038068 128 F-SKKRGHEKT-CQHSPLPCPLSDCSFLG-CSSQFVRHFMAKHNIS 170 (269)
Q Consensus 128 ~-~~~~~He~~-C~~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~ 170 (269)
. ..|..|... -.-.|+.|+. |+... ....|..|+...|..+
T Consensus 78 ~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~ 121 (124)
T 2dlq_A 78 RRMELRLHMVSHTGEMPYKCSS--CSQQFMQKKDLQSHMIKLHSGP 121 (124)
T ss_dssp SHHHHHHHHHHHSSSCSEECSS--SCCEESSHHHHHHHHHHTSSCS
T ss_pred CHHHHHHHHHHcCCCCCccCCC--ccchhCCHHHHHHHHHHHCCCC
Confidence 4 567888764 3456789984 98774 4578999999888754
No 90
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=85.02 E-value=2 Score=28.37 Aligned_cols=41 Identities=17% Similarity=0.317 Sum_probs=30.0
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhcCCCCCCCC
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCS 93 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~~~~Cp~C~ 93 (269)
....|..|..-+.-+-+.|.||.+||+.=...-...|+..-
T Consensus 14 ~~~rC~~C~kkvgl~~f~CrCg~~FC~~HRy~e~H~C~fDy 54 (64)
T 1wfh_A 14 RPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDF 54 (64)
T ss_dssp SCCCCTTTCCCCCTTCEECSSSCEECTTTCSTTTTTCCCCC
T ss_pred cCCcChhhCCccCccCEEeecCCEeccccCCcccCCCCchh
Confidence 44689999997665556899999999876554455676653
No 91
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=83.77 E-value=3.7 Score=27.88 Aligned_cols=42 Identities=19% Similarity=0.324 Sum_probs=30.6
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhcCCCCCCCCC
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSS 94 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~~~~Cp~C~~ 94 (269)
....|..|..-+.-+-+.|.||.+||+.=...-...|+..-.
T Consensus 24 ~~~RC~~C~kkvgL~~f~CrCg~~FCs~HRy~e~H~C~fDyk 65 (74)
T 1wfp_A 24 TATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFK 65 (74)
T ss_dssp CCCBCSSSCCBCTTTCEECTTSCEECTTTCSTTTSCCCSCTT
T ss_pred cCccchhhcCcccccceEeccCCEeccccCCCcCCCCcCchh
Confidence 446899999876655568999999998765544556766543
No 92
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=83.73 E-value=2 Score=30.89 Aligned_cols=85 Identities=14% Similarity=0.186 Sum_probs=55.2
Q ss_pred CCCCCCCCCCccccchh--HHHHhhcceecccCCCCCcccccc-ccchhhhhcc----CCCeeeeCCCCCCCCcc-ChhH
Q 038068 87 RNCPTCSSPTVIVRNWA--IEKVIELVQVNCKNAEYGCQQKMS-FSKKRGHEKT----CQHSPLPCPLSDCSFLG-CSSQ 158 (269)
Q Consensus 87 ~~Cp~C~~~~~~~~~~~--l~~~i~~l~v~C~~~~~GC~~~~~-~~~~~~He~~----C~~~p~~Cp~~~C~~~g-~~~~ 158 (269)
..|+.|...+....... +..-...-++.|+. |...+. ...|..|+.. =.-.++.|+. |+... ....
T Consensus 8 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~~~f~~~~~ 81 (124)
T 2dlq_A 8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPK----CGKCYFRKENLLEHEARNCMNRSEQVFTCSV--CQETFRRRME 81 (124)
T ss_dssp CCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTT----TCCBCSSHHHHHHHHHHCCCCSCCCCEECSS--SCCEESSHHH
T ss_pred CCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCC----CCchhcCHHHHHHHHhhhhcCCCCCCeECCC--CCCccCCHHH
Confidence 47999988765432211 22223345677874 777655 4678899763 3456789995 98774 4678
Q ss_pred HhhhhhhhCCCCccceeec
Q 038068 159 FVRHFMAKHNISAVPFKYN 177 (269)
Q Consensus 159 l~~Hl~~~H~~~~~~~~~~ 177 (269)
|..|+...+......+..+
T Consensus 82 l~~H~~~h~~~~~~~C~~C 100 (124)
T 2dlq_A 82 LRLHMVSHTGEMPYKCSSC 100 (124)
T ss_dssp HHHHHHHHSSSCSEECSSS
T ss_pred HHHHHHHcCCCCCccCCCc
Confidence 9999988776665555544
No 93
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=83.55 E-value=2.7 Score=31.60 Aligned_cols=55 Identities=25% Similarity=0.527 Sum_probs=26.0
Q ss_pred ceecccCCCCCcccccc-ccchhhhh-cc-CCCeeeeCCCCCCCCccC-hhHHhhhhhhhC
Q 038068 111 VQVNCKNAEYGCQQKMS-FSKKRGHE-KT-CQHSPLPCPLSDCSFLGC-SSQFVRHFMAKH 167 (269)
Q Consensus 111 l~v~C~~~~~GC~~~~~-~~~~~~He-~~-C~~~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H 167 (269)
-++.|+.. ||...+. ...|..|. .. -.-.++.|+.++|+.... ...|..|++..|
T Consensus 96 ~~~~C~~~--~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hh 154 (155)
T 2gli_A 96 KPYMCEHE--GCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154 (155)
T ss_dssp CCEECCST--TCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred CCeeCCCC--CCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhc
Confidence 34555432 4555443 24555554 22 233455565445655432 345666655544
No 94
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=83.20 E-value=1.2 Score=29.45 Aligned_cols=64 Identities=16% Similarity=0.333 Sum_probs=41.9
Q ss_pred eecccCCCCCccccccc-cchhhhhc-cC-CCeeeeCCCCCCCCcc-ChhHHhhhhhhhCCCCccceeec
Q 038068 112 QVNCKNAEYGCQQKMSF-SKKRGHEK-TC-QHSPLPCPLSDCSFLG-CSSQFVRHFMAKHNISAVPFKYN 177 (269)
Q Consensus 112 ~v~C~~~~~GC~~~~~~-~~~~~He~-~C-~~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~~~~~~~~ 177 (269)
.+.|... +|...+.. ..|..|++ .- .-.++.|+.++|+... ....|..|+...+......+.++
T Consensus 7 ~~~C~~~--~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 74 (79)
T 2dlk_A 7 GMPCDFP--GCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS 74 (79)
T ss_dssp SEECSST--TTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSS
T ss_pred CccCCCC--CCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCC
Confidence 3556543 67776654 56777765 22 3568899877798764 46789999987665555555443
No 95
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=83.04 E-value=1.7 Score=32.90 Aligned_cols=114 Identities=14% Similarity=0.150 Sum_probs=67.4
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhh-------cCCCCCCCCCCCccccch--hHHHHhhcceecccCCCCCcc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAK-------IKRNCPTCSSPTVIVRNW--AIEKVIELVQVNCKNAEYGCQ 123 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~-------~~~~Cp~C~~~~~~~~~~--~l~~~i~~l~v~C~~~~~GC~ 123 (269)
..+.|++|...|.....+ -.|.--..-... ....|+.|...+...... -+..-...-.+.|+.. +|.
T Consensus 24 ~~~~C~~C~~~f~~~~~L--~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~--~C~ 99 (155)
T 2rpc_A 24 LSRPKKSCDRTFSTMHEL--VTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFP--GCG 99 (155)
T ss_dssp CSSSCCCCCCCBSSHHHH--HHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCT--TTC
T ss_pred cccccccCCcccCCHHHH--HHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcC--CCC
Confidence 568899999988765321 112110000000 014699998876533221 1122234456788753 688
Q ss_pred ccccc-cchhhhhccC-CCeeeeCCCCCCCCccC-hhHHhhhhhhhCCCC
Q 038068 124 QKMSF-SKKRGHEKTC-QHSPLPCPLSDCSFLGC-SSQFVRHFMAKHNIS 170 (269)
Q Consensus 124 ~~~~~-~~~~~He~~C-~~~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H~~~ 170 (269)
..+.. ..|..|++.- .-.++.|+..+|+.... ...|..|++..+...
T Consensus 100 ~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k 149 (155)
T 2rpc_A 100 KIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDK 149 (155)
T ss_dssp CEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCC
T ss_pred CccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCC
Confidence 77664 5778898753 34678998767987754 568999988655543
No 96
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=82.98 E-value=0.99 Score=37.99 Aligned_cols=44 Identities=27% Similarity=0.486 Sum_probs=36.5
Q ss_pred CeeeccCCCCCCcCceeecc-CCceechhchhhc-----CCCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTVPVFQCV-NGHLACSDCCAKI-----KRNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~-cgH~fC~~C~~~~-----~~~Cp~C~~~~~ 97 (269)
....|.+|.+++..-+ .|+ |++.|=..|+.+| ...||.|+.+..
T Consensus 179 ~i~~C~iC~~iv~~g~-~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~~W~ 228 (238)
T 3nw0_A 179 AVKICNICHSLLIQGQ-SCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWP 228 (238)
T ss_dssp TCCBCTTTCSBCSSCE-ECSSSCCEECHHHHHHHTTTCSSCBCTTTCCBCC
T ss_pred CCCcCcchhhHHhCCc-ccCccChHHHHHHHHHHHHhCCCCCCCCCCCCCC
Confidence 4678999999999776 576 9999999999987 348999988764
No 97
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=82.21 E-value=0.99 Score=33.57 Aligned_cols=45 Identities=24% Similarity=0.445 Sum_probs=37.3
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc-CCCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI-KRNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~-~~~Cp~C~~~~~ 97 (269)
+=|.|..|..+|...-+.-.-|..+|..|..+. ...|..|..+|.
T Consensus 29 ~CF~C~~C~~~L~~~~f~~~~g~~yC~~cy~~~~~~~C~~C~~~I~ 74 (126)
T 2xqn_T 29 KHFCCFDCDSILAGEIYVMVNDKPVCKPCYVKNHAVVCQGCHNAID 74 (126)
T ss_dssp GGSBCTTTCCBCTTSEEEEETTEEEEHHHHHHHSCCBCTTTCSBCC
T ss_pred CCCCcCCCCCCCCcCEEEeECCEEechHHhCcCcCccCcccCCcCC
Confidence 668999999999864444478999999999876 678999998876
No 98
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.21 E-value=0.77 Score=29.59 Aligned_cols=37 Identities=14% Similarity=0.139 Sum_probs=29.0
Q ss_pred ccCCCeeeeCCCCCCCCccChhHHhhhhhhhCCCCcccee
Q 038068 136 KTCQHSPLPCPLSDCSFLGCSSQFVRHFMAKHNISAVPFK 175 (269)
Q Consensus 136 ~~C~~~p~~Cp~~~C~~~g~~~~l~~Hl~~~H~~~~~~~~ 175 (269)
+.|+.+|+.|+. |+.......|..|... +......+.
T Consensus 4 ~~C~~~~~~C~~--C~k~f~~~~L~~H~~~-~~~~p~~C~ 40 (66)
T 2eod_A 4 GSSGKRTQPCTY--CTKEFVFDTIQSHQYQ-CPRLPVACP 40 (66)
T ss_dssp SCCCCCEEECSS--SCCEEEHHHHHHHHHH-CSSSEEECT
T ss_pred ccCCCCCeeccc--cCCccCHHHHHHHHHH-cCCcCccCC
Confidence 579999999995 9876568899999987 665555554
No 99
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=82.10 E-value=1.1 Score=45.14 Aligned_cols=63 Identities=14% Similarity=0.082 Sum_probs=52.5
Q ss_pred CCCCeeeccCCCCCCcCceeeccCC-ceechhchhhc---CCCCCCCCCCCcc---ccchhHHHHhhccee
Q 038068 50 TDQDIFDCPICFEPLTVPVFQCVNG-HLACSDCCAKI---KRNCPTCSSPTVI---VRNWAIEKVIELVQV 113 (269)
Q Consensus 50 ~~~~~l~C~iC~~~l~~Pv~~c~cg-H~fC~~C~~~~---~~~Cp~C~~~~~~---~~~~~l~~~i~~l~v 113 (269)
..|+.+.|||=.+++.+||. .+.| +++=+..|.+| ...||.=+.++.. .+|.++...|..+..
T Consensus 887 ~iP~~F~cPIs~~lM~DPVi-lpsG~~TydR~~I~~wl~~~~tdP~Tr~~L~~~~liPN~~Lk~~I~~w~~ 956 (968)
T 3m62_A 887 DVPDEFLDPLMYTIMKDPVI-LPASKMNIDRSTIKAHLLSDSTDPFNRMPLKLEDVTPNEELRQKILCFKK 956 (968)
T ss_dssp CSCGGGBCTTTCSBCSSEEE-CTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCGGGCEECHHHHHHHHHHHH
T ss_pred CCcHHhCCcchhhHHhCCeE-cCCCCEEECHHHHHHHHhcCCCCCCCCCCCCcccccccHHHHHHHHHHHH
Confidence 34699999999999999996 5777 68999999999 5679999998863 588888888887643
No 100
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=81.47 E-value=2.8 Score=27.70 Aligned_cols=42 Identities=21% Similarity=0.300 Sum_probs=30.6
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhcCCCCCCCCC
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSS 94 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~~~~Cp~C~~ 94 (269)
....|..|..-+.-+.+.|.||.+||..=...-...|+..-.
T Consensus 14 ~~~rC~~C~kkvgl~~f~CrCg~~FC~~HR~~e~H~C~fDyk 55 (64)
T 1wg2_A 14 PNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFK 55 (64)
T ss_dssp CSCSCTTTCCCCTTSCEECTTSCEECSSSCSSTTTTCCCCCS
T ss_pred cCCcChhhCCcccccCeEeecCCEecccCCCccccCCCcchh
Confidence 345899999976655568999999998766544556776544
No 101
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=81.43 E-value=2.9 Score=28.38 Aligned_cols=40 Identities=28% Similarity=0.489 Sum_probs=28.2
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhcCCCCCCC
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTC 92 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~~~~Cp~C 92 (269)
....|..|..-+....+.|.||..||+.=...-...|+..
T Consensus 24 ~~nRC~~CrKkvgL~gf~CrCg~~FCs~HRy~e~H~C~fD 63 (74)
T 1wfl_A 24 KKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYD 63 (74)
T ss_dssp CTTBCSSSCCBCGGGCEECTTSCEECSSSCSTTTTTCCCC
T ss_pred cCCcChhhCCcccccCeecCCCCEechhcCCCccCCCcch
Confidence 3458999998654434689999999986655444567654
No 102
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=81.03 E-value=0.49 Score=36.43 Aligned_cols=26 Identities=23% Similarity=0.529 Sum_probs=22.5
Q ss_pred CeeeeCCCCCCCCccChhHHhh-hhhh
Q 038068 140 HSPLPCPLSDCSFLGCSSQFVR-HFMA 165 (269)
Q Consensus 140 ~~p~~Cp~~~C~~~g~~~~l~~-Hl~~ 165 (269)
-.++.||+.||+|.+...++.. |+..
T Consensus 102 ~L~v~Cpn~GC~~~~~l~~l~~~H~~~ 128 (141)
T 3knv_A 102 SLPAVCPSDGCTWKGTLKEYESCHEGR 128 (141)
T ss_dssp TSEEECCSTTCCCEEEHHHHHHHTTTC
T ss_pred ccccccCCCCCCCEeEHHHHHHHHHHH
Confidence 4578999999999999999998 8754
No 103
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=80.90 E-value=1.4 Score=29.30 Aligned_cols=74 Identities=24% Similarity=0.520 Sum_probs=43.0
Q ss_pred CCCCCCCccccch--hHHHHhhcceecccCCCCCccccccc-cchhhhhccCCCeeeeCCCCC-CCCccC-hhHHhhhhh
Q 038068 90 PTCSSPTVIVRNW--AIEKVIELVQVNCKNAEYGCQQKMSF-SKKRGHEKTCQHSPLPCPLSD-CSFLGC-SSQFVRHFM 164 (269)
Q Consensus 90 p~C~~~~~~~~~~--~l~~~i~~l~v~C~~~~~GC~~~~~~-~~~~~He~~C~~~p~~Cp~~~-C~~~g~-~~~l~~Hl~ 164 (269)
+.|...+...... -+..-....++.|+.. ||...+.. ..|..|++.-.- +.|+.++ |+.... ...|..|++
T Consensus 7 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~--~C~~~f~~~~~l~~H~~~h~~--~~C~~~~~C~~~f~~~~~l~~H~~ 82 (85)
T 2j7j_A 7 ENCGKAFKKHNQLKVHQFSHTQQLPYECPHE--GCDKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVGKTWTLYLKHVA 82 (85)
T ss_dssp TTCCCEESSHHHHHHHHHHHHTTCCEECCST--TCCCEESSHHHHHHHHHHHHS--EECCSCSSCCCEESSHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHhCCCCCeeCCCC--CCcCccCCHHHHHHHHHHhCC--CCCCCCCCCCCccCCHHHHHHHHH
Confidence 6676655432111 1222234556788653 78776654 566777654222 7787654 887654 568888887
Q ss_pred hhC
Q 038068 165 AKH 167 (269)
Q Consensus 165 ~~H 167 (269)
..|
T Consensus 83 ~hh 85 (85)
T 2j7j_A 83 ECH 85 (85)
T ss_dssp HCC
T ss_pred hcC
Confidence 655
No 104
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=80.39 E-value=1.1 Score=29.16 Aligned_cols=38 Identities=29% Similarity=0.646 Sum_probs=29.0
Q ss_pred eeccCCCCCCcCc-eeecc-CCceechhchhhc---CCCCCCC
Q 038068 55 FDCPICFEPLTVP-VFQCV-NGHLACSDCCAKI---KRNCPTC 92 (269)
Q Consensus 55 l~C~iC~~~l~~P-v~~c~-cgH~fC~~C~~~~---~~~Cp~C 92 (269)
..|-.|...+.+. +++|+ |++.||.+|=.-+ -..||.|
T Consensus 16 ~~C~~C~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~CPgC 58 (59)
T 1z60_A 16 RFCYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLHSCPGC 58 (59)
T ss_dssp CEETTTTEECTTSEEECCTTTTCCBCHHHHHTTTTTSCSSSTT
T ss_pred CcccccCcccCCCccEECCccCcCcccchhHHHHhhccCCcCC
Confidence 3599999998654 47886 9999999995433 3579887
No 105
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=80.34 E-value=1.2 Score=31.61 Aligned_cols=38 Identities=32% Similarity=0.413 Sum_probs=24.8
Q ss_pred chhhhhccCCCeeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 130 KKRGHEKTCQHSPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 130 ~~~~He~~C~~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
.|..|+.--.-.|+.|+. |+... ....|..|++..|..
T Consensus 57 ~l~~H~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~ 95 (107)
T 1wjp_A 57 LKQEHESKCEYKKLTCLE--CMRTFKSSFSIWRHQVEVHNQ 95 (107)
T ss_dssp HHHHHHHHCSTGGGEEGG--GTEECSSHHHHHHHHHHTSCC
T ss_pred HHHHHHHcCCCCCccCcc--ccchhCCHHHHHHHHHHHcCC
Confidence 444554333345678884 88664 456899999877764
No 106
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=80.01 E-value=2.8 Score=28.64 Aligned_cols=52 Identities=23% Similarity=0.477 Sum_probs=34.1
Q ss_pred eecccCCCCCccccccc-cchhhhhccC-CCeeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 112 QVNCKNAEYGCQQKMSF-SKKRGHEKTC-QHSPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 112 ~v~C~~~~~GC~~~~~~-~~~~~He~~C-~~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
.+.|+. |...+.. ..|..|+..- .-.++.|+. |+... ....|..|++..|..
T Consensus 36 ~~~C~~----C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 90 (96)
T 2dmd_A 36 PYKCKT----CDYAAADSSSLNKHLRIHSDERPFKCQI--CPYASRNSSQLTVHLRSHTGD 90 (96)
T ss_dssp SEECSS----SCCEESSHHHHHHHHHHSCCCCCEECSS--SSCEESSHHHHHHHHTTCCSC
T ss_pred CEeCCC----CCCccCCHHHHHHHHHHhCCCCCccCCC--CCCccCCHHHHHHHHHHhcCC
Confidence 456653 6655543 4667776542 345789985 98764 467899998876654
No 107
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=78.66 E-value=0.48 Score=33.99 Aligned_cols=38 Identities=39% Similarity=0.862 Sum_probs=28.7
Q ss_pred eeccCCCCCCcCceeeccCCceechhchhhc--CCCCCCCCCCCc
Q 038068 55 FDCPICFEPLTVPVFQCVNGHLACSDCCAKI--KRNCPTCSSPTV 97 (269)
Q Consensus 55 l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~--~~~Cp~C~~~~~ 97 (269)
..||+|...+.. .-++..|..|-... ...||.|.+++.
T Consensus 33 ~~CP~Cq~eL~~-----~g~~~hC~~C~~~f~~~a~CPdC~q~Le 72 (101)
T 2jne_A 33 LHCPQCQHVLDQ-----DNGHARCRSCGEFIEMKALCPDCHQPLQ 72 (101)
T ss_dssp CBCSSSCSBEEE-----ETTEEEETTTCCEEEEEEECTTTCSBCE
T ss_pred ccCccCCCccee-----cCCEEECccccchhhccccCcchhhHHH
Confidence 899999987652 23566699998766 467999988764
No 108
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=78.61 E-value=2.4 Score=31.86 Aligned_cols=59 Identities=20% Similarity=0.303 Sum_probs=39.7
Q ss_pred hcceecccCCCCCccccccc-cchhhhhccC-CCeeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 109 ELVQVNCKNAEYGCQQKMSF-SKKRGHEKTC-QHSPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 109 ~~l~v~C~~~~~GC~~~~~~-~~~~~He~~C-~~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
..-++.|+.. +|...+.. ..|..|++.- .-.++.|+..+|+... ....|..|+...|..
T Consensus 64 ~~~~~~C~~~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~ 125 (155)
T 2gli_A 64 GEKPHKCTFE--GCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN 125 (155)
T ss_dssp CCCCCCCCST--TCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred CCCCccCCCC--CCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCC
Confidence 3456777643 58776654 5777887653 3467889876788764 456889998666654
No 109
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=78.54 E-value=2.4 Score=27.66 Aligned_cols=52 Identities=33% Similarity=0.624 Sum_probs=34.8
Q ss_pred cccCCCCCcccccc-ccchhhhhcc----CC----CeeeeCCCCCCCCccC-hhHHhhhhhhhC
Q 038068 114 NCKNAEYGCQQKMS-FSKKRGHEKT----CQ----HSPLPCPLSDCSFLGC-SSQFVRHFMAKH 167 (269)
Q Consensus 114 ~C~~~~~GC~~~~~-~~~~~~He~~----C~----~~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H 167 (269)
.|... +|...+. ..+|..|... -. -.++.|...+|++.+. ...|..|++.+|
T Consensus 3 ~C~W~--~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 3 KCKWK--ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp CCCCT--TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred eEeeC--CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence 45554 6776554 3456677521 11 2378999889998765 578999999887
No 110
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=78.53 E-value=2.4 Score=28.48 Aligned_cols=24 Identities=25% Similarity=0.602 Sum_probs=10.0
Q ss_pred eeeCCCCCCCCcc-ChhHHhhhhhh
Q 038068 142 PLPCPLSDCSFLG-CSSQFVRHFMA 165 (269)
Q Consensus 142 p~~Cp~~~C~~~g-~~~~l~~Hl~~ 165 (269)
++.|++..|+... ....|..|+..
T Consensus 35 ~~~C~~~~C~~~f~~~~~l~~H~~~ 59 (89)
T 2wbs_A 35 PYHCDWDGCGWKFARSDELTRHYRK 59 (89)
T ss_dssp CEECCSTTTCCEESSHHHHHHHHHH
T ss_pred CcCCCCCCCCCccCCHHHHHHHHHH
Confidence 4444433444332 23344445443
No 111
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=76.11 E-value=1.7 Score=32.17 Aligned_cols=45 Identities=11% Similarity=0.249 Sum_probs=35.7
Q ss_pred CeeeccCCCCCCc---CceeeccCCceechhchhhc-CC--CCCCCCCCCcc
Q 038068 53 DIFDCPICFEPLT---VPVFQCVNGHLACSDCCAKI-KR--NCPTCSSPTVI 98 (269)
Q Consensus 53 ~~l~C~iC~~~l~---~Pv~~c~cgH~fC~~C~~~~-~~--~Cp~C~~~~~~ 98 (269)
+=|.|..|..+|. ...+ -.-|..+|..|..+. .. .|..|..+|..
T Consensus 31 ~CF~C~~C~~~L~~~~~~~~-~~~g~~yC~~cy~~~f~~~~~C~~C~~~I~~ 81 (122)
T 1m3v_A 31 RCLKCSSCQAQLGDIGTSSY-TKSGMILCRNDYIRLFGNSGAGGSGGHMGSG 81 (122)
T ss_dssp HHHCCSSSCCCTTTSEECCE-EETTEEECHHHHHHHHCCCCSSSCSSCCSCC
T ss_pred hCCCcCCCCCcccccCCeEE-EECCeeecHHHHHHHcCCCCccccCCCCcCc
Confidence 5588999999996 2343 378999999999876 44 89999988863
No 112
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=75.91 E-value=3.1 Score=28.86 Aligned_cols=36 Identities=28% Similarity=0.518 Sum_probs=26.1
Q ss_pred CCCCeeeccCCCCCCcCc--eeecc-CCceechhchhhc
Q 038068 50 TDQDIFDCPICFEPLTVP--VFQCV-NGHLACSDCCAKI 85 (269)
Q Consensus 50 ~~~~~l~C~iC~~~l~~P--v~~c~-cgH~fC~~C~~~~ 85 (269)
.|.+.-.|.+|...|..- -..|. ||.+||..|....
T Consensus 17 pd~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~ 55 (84)
T 1z2q_A 17 EDEDAPACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRHR 55 (84)
T ss_dssp CTTTCCBCTTTCCBCCTTSCCEECTTTCCEECTGGGCCE
T ss_pred cCCCCCCCcCcCCccccchhcccccCCCcEEChHHhCCe
Confidence 344667899999987533 23564 9999999998653
No 113
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=75.87 E-value=2.3 Score=28.43 Aligned_cols=44 Identities=16% Similarity=0.249 Sum_probs=34.0
Q ss_pred CeeeccCCCCCCcCceeeccCCceech-hchhhc-CCCCCCCCCCC
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACS-DCCAKI-KRNCPTCSSPT 96 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~-~C~~~~-~~~Cp~C~~~~ 96 (269)
+=|.|..|..+|..--+.-.-|..+|. .|..+. ...|..|...+
T Consensus 26 ~CF~C~~C~~~L~~~~~~~~~g~~yC~~~cy~~~f~~~C~~C~~~~ 71 (76)
T 1iml_A 26 PCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYSAMFGPKGFGRGGAE 71 (76)
T ss_dssp TTCBCTTTCCBCCTTTEEEETTEEEETTTHHHHHSSCCCSSCCCSS
T ss_pred CCCCccccCccCCCCceECcCCeEeeCHHHHHHHhCccCCCcCCce
Confidence 568899999998863333478999999 699876 67898887654
No 114
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=75.02 E-value=3.9 Score=28.06 Aligned_cols=51 Identities=18% Similarity=0.372 Sum_probs=25.7
Q ss_pred ceecccCCCCCccccccc-cchhhhhcc-CCCeeeeCCCCCCCCcc-ChhHHhhhhhh
Q 038068 111 VQVNCKNAEYGCQQKMSF-SKKRGHEKT-CQHSPLPCPLSDCSFLG-CSSQFVRHFMA 165 (269)
Q Consensus 111 l~v~C~~~~~GC~~~~~~-~~~~~He~~-C~~~p~~Cp~~~C~~~g-~~~~l~~Hl~~ 165 (269)
-.+.|++. +|...+.. ..|..|+.. -.-.++.|+. |+... ....|..|++.
T Consensus 44 ~~~~C~~~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~ 97 (100)
T 2ebt_A 44 KPYKCTWE--GCDWRFARSDELTRHYRKHTGAKPFQCGV--CNRSFSRSDHLALHMKR 97 (100)
T ss_dssp CCEECCSS--SCCCEESSHHHHHHHHHHHTSCCSCBCSS--SCCBCSSHHHHHHHHHH
T ss_pred CCeeCCCC--CCCCccCCHHHHHHHHHHhCCCCCeECCC--CcCccCCHHHHHHHHHH
Confidence 34556532 46555443 345556442 2334566663 66543 34566666553
No 115
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=73.73 E-value=1.5 Score=30.22 Aligned_cols=40 Identities=25% Similarity=0.479 Sum_probs=27.7
Q ss_pred CeeeccC--CCCCCc----Cceeec------cCCceechhchhhcCCCCCCCCC
Q 038068 53 DIFDCPI--CFEPLT----VPVFQC------VNGHLACSDCCAKIKRNCPTCSS 94 (269)
Q Consensus 53 ~~l~C~i--C~~~l~----~Pv~~c------~cgH~fC~~C~~~~~~~Cp~C~~ 94 (269)
...-||. |...+. .+..+| .||+.||..|...|. . -.|..
T Consensus 24 ~~~~CP~p~C~~~v~~~~~~~~v~C~~~~~~~C~~~FC~~C~~~wH-~-~~C~~ 75 (80)
T 2jmo_A 24 GGVLCPRPGCGAGLLPEPDQRKVTCEGGNGLGCGFAFCRECKEAYH-E-GECSA 75 (80)
T ss_dssp SSCCCCSSSCCCCCCCCSCTTSBCTTSSSTTCCSCCEETTTTEECC-S-SCSSS
T ss_pred CcEECCCCCCCcccEECCCCCcCCCCCCCCCCCCCeeccccCcccc-C-Ccccc
Confidence 3456887 877653 223478 699999999999983 2 45544
No 116
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=72.66 E-value=6.3 Score=27.39 Aligned_cols=38 Identities=18% Similarity=0.226 Sum_probs=23.7
Q ss_pred chhhhhcc-CCCeeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 130 KKRGHEKT-CQHSPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 130 ~~~~He~~-C~~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
.|..|+.. -.-.++.|+. |+... ....|..|++..+..
T Consensus 60 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~ 99 (106)
T 2ee8_A 60 HLRDHRYIHSKEKPFKCQE--CGKGFCQSRTLAVHKTLHMQT 99 (106)
T ss_dssp HHHHHGGGSCCCCTTSCSS--SCCCCSSHHHHHHHHHHTTSC
T ss_pred HHHHHHHHhCCCCCeECCC--cCCcccCHHHHHHHHHHhCCC
Confidence 44555443 2234678884 88765 457899998765543
No 117
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=71.84 E-value=1.9 Score=30.71 Aligned_cols=43 Identities=26% Similarity=0.563 Sum_probs=34.8
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc---CCCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI---KRNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~---~~~Cp~C~~~~~ 97 (269)
--+.|-.|-...+.=| . -..|-.|..|+..+ +..||+|..++-
T Consensus 27 G~~nCKsCWf~~k~LV-~-C~dHYLCl~CLtlmL~~SdrCpIC~~pLP 72 (99)
T 2ko5_A 27 GPQFCKSCWFENKGLV-E-CNNHYLCLNCLTLLLSVSNRCPICKMPLP 72 (99)
T ss_dssp CCCCCCSSCSCCSSEE-E-CSSCEEEHHHHHHTCSSSSEETTTTEECC
T ss_pred CcccChhhccccCCee-e-ecchhhHHHHHHHHHhhccCCcccCCcCC
Confidence 4578999998777655 3 36799999999987 678999998764
No 118
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.58 E-value=4.1 Score=28.19 Aligned_cols=35 Identities=26% Similarity=0.598 Sum_probs=25.4
Q ss_pred CCCCeeeccCCCCCCcCc--eeecc-CCceechhchhh
Q 038068 50 TDQDIFDCPICFEPLTVP--VFQCV-NGHLACSDCCAK 84 (269)
Q Consensus 50 ~~~~~l~C~iC~~~l~~P--v~~c~-cgH~fC~~C~~~ 84 (269)
.|.+.-.|.+|...|..- -..|. ||.+||..|...
T Consensus 10 pd~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~ 47 (84)
T 1x4u_A 10 PTNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSF 47 (84)
T ss_dssp SCCCCSSCSSSCCCCCSSSCCEECSSSCCEECTTTSCE
T ss_pred cCCCCCcCcCcCCccccchhhhhhcCCCcEEChhhcCC
Confidence 344567899999987532 23464 999999999764
No 119
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=70.96 E-value=3.3 Score=32.92 Aligned_cols=44 Identities=23% Similarity=0.466 Sum_probs=24.3
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc-CCCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI-KRNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~-~~~Cp~C~~~~~ 97 (269)
+=|.|..|..+|....+. .-|..+|..|..+. ...|..|..+|.
T Consensus 86 ~CF~C~~C~~~L~~~~f~-~~g~~yC~~~y~~~f~~kC~~C~~~I~ 130 (182)
T 2jtn_A 86 KCLKCSDCHVPLAERCFS-RGESVYCKDDFFKRFGTKCAACQLGIP 130 (182)
T ss_dssp STTSCTTTCCCCSSCCEE-ETTEEECHHHHHHTTSCCCTTTCCCCC
T ss_pred ccCccCCCCCccCCCcee-ECCEeeecCccccccccccccCCCccC
Confidence 345566666666544332 45666666666554 445666665543
No 120
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=70.93 E-value=2.4 Score=31.82 Aligned_cols=33 Identities=27% Similarity=0.721 Sum_probs=24.7
Q ss_pred CeeeccCCCCCCcCc--eeecc-CCceechhchhhc
Q 038068 53 DIFDCPICFEPLTVP--VFQCV-NGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~P--v~~c~-cgH~fC~~C~~~~ 85 (269)
+.-.|.+|...|..- -..|. ||++||..|....
T Consensus 68 ~~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~~ 103 (125)
T 1joc_A 68 EVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKN 103 (125)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEE
T ss_pred CCCCCcCcCCccccccccccCCCCCeEEChHHhCCc
Confidence 456899999987633 23564 9999999998654
No 121
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=70.72 E-value=4.2 Score=26.66 Aligned_cols=74 Identities=16% Similarity=0.299 Sum_probs=42.4
Q ss_pred CCCCCCCCCccccch--hHHHHhhcceecccCCCCCccccccc-cchhhhhcc-CCCeeeeCCCCCCCCcc-ChhHHhhh
Q 038068 88 NCPTCSSPTVIVRNW--AIEKVIELVQVNCKNAEYGCQQKMSF-SKKRGHEKT-CQHSPLPCPLSDCSFLG-CSSQFVRH 162 (269)
Q Consensus 88 ~Cp~C~~~~~~~~~~--~l~~~i~~l~v~C~~~~~GC~~~~~~-~~~~~He~~-C~~~p~~Cp~~~C~~~g-~~~~l~~H 162 (269)
.|+.|...+...... -+..-...-++.|+. |...+.. ..|..|+.. -.-.++.|+. |+... ....|..|
T Consensus 3 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H 76 (82)
T 2kmk_A 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQY----CGKRFHQKSDMKKHTFIHTGEKPHKCQV--CGKAFSQSSNLITH 76 (82)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHHTCCCEECSS----SCCEESSHHHHHHHHHHHHTCCCEECTT--TSCEESSHHHHHHH
T ss_pred cCCCCcccccCchhHHHHHHHcCCCCCeeCCc----CChhhCCHHHHHHHHHHhcCCCCCcCCC--cchhhCChHHHHHH
Confidence 477776655432211 112223445567764 7666543 466677643 2346788884 88764 45688899
Q ss_pred hhhhC
Q 038068 163 FMAKH 167 (269)
Q Consensus 163 l~~~H 167 (269)
++..+
T Consensus 77 ~~~H~ 81 (82)
T 2kmk_A 77 SRKHT 81 (82)
T ss_dssp HHHHC
T ss_pred HHhhC
Confidence 87543
No 122
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=70.25 E-value=3.5 Score=28.44 Aligned_cols=36 Identities=22% Similarity=0.678 Sum_probs=25.9
Q ss_pred CCCCeeeccCCCCCCcCc--eeecc-CCceechhchhhc
Q 038068 50 TDQDIFDCPICFEPLTVP--VFQCV-NGHLACSDCCAKI 85 (269)
Q Consensus 50 ~~~~~l~C~iC~~~l~~P--v~~c~-cgH~fC~~C~~~~ 85 (269)
.+.+.-.|.+|...|..- -..|. ||.+||..|....
T Consensus 15 ~d~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~ 53 (82)
T 2yw8_A 15 KDDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNE 53 (82)
T ss_dssp CCCCCCBCTTTCCBCBTTBCCEECTTTCCEECSGGGCEE
T ss_pred cCccCCcccCcCCcccCccccccCCCCCCEEChHHhCCe
Confidence 344556899999987633 23464 9999999998753
No 123
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=69.96 E-value=3.7 Score=32.18 Aligned_cols=44 Identities=23% Similarity=0.466 Sum_probs=36.8
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc-CCCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI-KRNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~-~~~Cp~C~~~~~ 97 (269)
+=|.|..|..+|....+. .-|..+|..|..+. ...|..|..+|.
T Consensus 32 ~CF~C~~C~~~L~~~~f~-~~g~~yC~~~y~~~f~~~C~~C~~~I~ 76 (169)
T 2rgt_A 32 KCLKCSDCHVPLAERCFS-RGESVYCKDDFFKRFGTKCAACQLGIP 76 (169)
T ss_dssp TTSBCTTTCCBCCSCCEE-SSSCEECHHHHHHHHSCBCTTTCCBCC
T ss_pred ccCccCCCCCcCCCCCcc-cCCeeeecccccccccccccccccccC
Confidence 668999999999876553 78999999999876 678999988775
No 124
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=69.75 E-value=6 Score=29.69 Aligned_cols=55 Identities=16% Similarity=0.290 Sum_probs=37.5
Q ss_pred ccccccc-cchhhhhccC-CCeeeeCCCCCCCCcc-ChhHHhhhhhhhCCCCccceee
Q 038068 122 CQQKMSF-SKKRGHEKTC-QHSPLPCPLSDCSFLG-CSSQFVRHFMAKHNISAVPFKY 176 (269)
Q Consensus 122 C~~~~~~-~~~~~He~~C-~~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~~~~~~~ 176 (269)
|...+.. ..|..|++.= .-.++.|+.++|+... ....|..|+...+......+.+
T Consensus 68 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~ 125 (155)
T 2rpc_A 68 EGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEF 125 (155)
T ss_dssp SSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSS
T ss_pred cccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCC
Confidence 6665553 5677786532 3367899877899775 4678999998766665555553
No 125
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=69.44 E-value=5.2 Score=25.13 Aligned_cols=51 Identities=24% Similarity=0.357 Sum_probs=34.9
Q ss_pred eecccCCCCCccccccc-cchhhhhcc-C--CCeeeeCCCCCCCCcc-ChhHHhhhhhhhCC
Q 038068 112 QVNCKNAEYGCQQKMSF-SKKRGHEKT-C--QHSPLPCPLSDCSFLG-CSSQFVRHFMAKHN 168 (269)
Q Consensus 112 ~v~C~~~~~GC~~~~~~-~~~~~He~~-C--~~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~ 168 (269)
+..|+ -|...+.. ..|..|... - .-.|+.|+. |+... ....|..|....|.
T Consensus 10 ~~~C~----~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 10 TYRCK----VCSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp EEECT----TTCCEESSHHHHHHHHHHHSSSSCCCEECTT--TCCEESCHHHHHHHHHHHTC
T ss_pred ceECC----CCcchhCCHHHHHHHHHHHcCCCCcCeECCC--CCCccCCHHHHHHHHHHHcC
Confidence 45665 36665553 566778654 2 557889984 88764 45789999988875
No 126
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=68.96 E-value=4.9 Score=28.49 Aligned_cols=40 Identities=13% Similarity=0.129 Sum_probs=26.6
Q ss_pred cchhhhhcc-CCCeeeeCCCCCCCCccC-hhHHhhhhhhhCCCC
Q 038068 129 SKKRGHEKT-CQHSPLPCPLSDCSFLGC-SSQFVRHFMAKHNIS 170 (269)
Q Consensus 129 ~~~~~He~~-C~~~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H~~~ 170 (269)
..|..|+.. -.-.|+.|+. |+.... ...|..|++..|...
T Consensus 66 ~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~hh~~~ 107 (115)
T 2dmi_A 66 RSLLEMEGKEDAQKVLKCMY--CGHSFESLQDLSVHMIKTKHYQ 107 (115)
T ss_dssp CCCCCCCCSCCCCSSCBCSS--SCCBCSSHHHHHHHHHHTTTTT
T ss_pred HHHHHHhhccCCCcceECCC--CCCccCCHHHHHHHHHHhCCcc
Confidence 345555432 2346788984 987654 678999999887654
No 127
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=68.85 E-value=4.9 Score=25.86 Aligned_cols=51 Identities=24% Similarity=0.453 Sum_probs=33.4
Q ss_pred eecccCCCCCccccccc-cchhhhhcc-CCCeeeeCCCCCCCCccC-hhHHhhhhh
Q 038068 112 QVNCKNAEYGCQQKMSF-SKKRGHEKT-CQHSPLPCPLSDCSFLGC-SSQFVRHFM 164 (269)
Q Consensus 112 ~v~C~~~~~GC~~~~~~-~~~~~He~~-C~~~p~~Cp~~~C~~~g~-~~~l~~Hl~ 164 (269)
...|+.. ||...+.. ..|..|++. -.-.|+.|++..|+.... ...|..|++
T Consensus 17 ~~~C~~~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~ 70 (72)
T 2epa_A 17 SHICSHP--GCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR 70 (72)
T ss_dssp CEECSST--TTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred ceeCCCC--CCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhh
Confidence 4567643 68776654 466777653 445678897657887654 567888864
No 128
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=68.25 E-value=7.2 Score=23.87 Aligned_cols=47 Identities=21% Similarity=0.448 Sum_probs=30.9
Q ss_pred cccccc-ccchhhhhcc-CCCeeeeCCCCCCCCcc-ChhHHhhhhhhhCCCC
Q 038068 122 CQQKMS-FSKKRGHEKT-CQHSPLPCPLSDCSFLG-CSSQFVRHFMAKHNIS 170 (269)
Q Consensus 122 C~~~~~-~~~~~~He~~-C~~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~ 170 (269)
|...+. ...|..|.+. -.-.|+.|+. |+... ....|..|+...|...
T Consensus 8 C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~ 57 (60)
T 2adr_A 8 CTRAFARQEHLKRHYRSHTNEKPYPCGL--CNRAFTRRDLLIRHAQKIHSGN 57 (60)
T ss_dssp TCCCBSCHHHHHHHHHTTTSSCSEECTT--TCCEESSHHHHHHHHTTTSCCS
T ss_pred CccccCCHHHHHHHHHHhCCCCCccCCC--CCCccCCHHHHHHHHHHHcCCc
Confidence 555444 3456667654 2345789984 88764 4678999988888653
No 129
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=67.90 E-value=12 Score=25.97 Aligned_cols=41 Identities=15% Similarity=0.275 Sum_probs=29.7
Q ss_pred CeeeccCCCCCCcC--ceeeccCCceechhchhhcCCCCCCCCC
Q 038068 53 DIFDCPICFEPLTV--PVFQCVNGHLACSDCCAKIKRNCPTCSS 94 (269)
Q Consensus 53 ~~l~C~iC~~~l~~--Pv~~c~cgH~fC~~C~~~~~~~Cp~C~~ 94 (269)
..-.|..|..-+.- ++ .|.||.+||+.=...-...|+..-.
T Consensus 24 ~~~rC~~C~kkvgl~~~f-~CrCg~~FC~~HRy~e~H~C~fDyK 66 (85)
T 1wff_A 24 IMKHCFLCGKKTGLATSF-ECRCGNNFCASHRYAEAHGCNYDYK 66 (85)
T ss_dssp CCCBCSSSCCBCSSSSCE-ECTTCCEECTTTCSTGGGTCCSCCS
T ss_pred cCccchhhCCeecccCCe-EcCCCCEecccCCCccCCCCcchhh
Confidence 34689999986554 65 7999999998766544557877433
No 130
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=67.60 E-value=4.4 Score=36.21 Aligned_cols=58 Identities=19% Similarity=0.451 Sum_probs=41.4
Q ss_pred eeeccCCCCCCcCceeeccCCceechhchhhc-------CCCCCCCCCCCcc---ccchhHHHHhhcc
Q 038068 54 IFDCPICFEPLTVPVFQCVNGHLACSDCCAKI-------KRNCPTCSSPTVI---VRNWAIEKVIELV 111 (269)
Q Consensus 54 ~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~-------~~~Cp~C~~~~~~---~~~~~l~~~i~~l 111 (269)
.|.||+=...+..|+.--.|.|+-|-+=..-+ ...||+|...+.. ..+..+.+++..+
T Consensus 249 SL~CPlS~~ri~~PvRg~~C~HlQCFDl~sfL~~~~~~~~W~CPIC~k~~~~~dL~ID~~~~~IL~~~ 316 (371)
T 3i2d_A 249 SLQCPISYTRMKYPSKSINCKHLQCFDALWFLHSQLQIPTWQCPVCQIDIALENLAISEFVDDILQNC 316 (371)
T ss_dssp ESBCTTTSSBCSSEEEETTCCSSCCEEHHHHHHHHHHSCCCBCTTTCCBCCGGGEEEBHHHHHHHTTS
T ss_pred eecCCCccccccccCcCCcCCCcceECHHHHHHHhhcCCceeCCCCCcccCHHHeeEcHHHHHHHHhc
Confidence 58999999999999987789999765432111 4689999987753 3455566666554
No 131
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=67.59 E-value=8.6 Score=27.45 Aligned_cols=80 Identities=19% Similarity=0.368 Sum_probs=44.2
Q ss_pred CCCCCCCCCCccccchh--HHHHhhcceecccCCCCCccccccc-cchhhhhcc-CCCeeeeCCCCCCCCcc-ChhHHhh
Q 038068 87 RNCPTCSSPTVIVRNWA--IEKVIELVQVNCKNAEYGCQQKMSF-SKKRGHEKT-CQHSPLPCPLSDCSFLG-CSSQFVR 161 (269)
Q Consensus 87 ~~Cp~C~~~~~~~~~~~--l~~~i~~l~v~C~~~~~GC~~~~~~-~~~~~He~~-C~~~p~~Cp~~~C~~~g-~~~~l~~ 161 (269)
..|+.|...+....... +..-...-.+.|+.. +|...+.. ..|..|++. -.-.++.||+..|+... ....|..
T Consensus 35 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~ 112 (124)
T 1ubd_C 35 HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFE--GCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKS 112 (124)
T ss_dssp EECTTTCCEESSHHHHHHHGGGTSCCCCEECCST--TCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHH
T ss_pred eECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCC--CCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHH
Confidence 46888877654322111 111122345667642 57766553 466677643 23356788755787664 3567888
Q ss_pred hhhhhCC
Q 038068 162 HFMAKHN 168 (269)
Q Consensus 162 Hl~~~H~ 168 (269)
|+...+.
T Consensus 113 H~~~H~~ 119 (124)
T 1ubd_C 113 HILTHAK 119 (124)
T ss_dssp HHHHHC-
T ss_pred HHHHHcc
Confidence 8776543
No 132
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene, transcription, developmental protein; 2.40A {Homo sapiens} PDB: 2xjz_A
Probab=67.35 E-value=3 Score=30.99 Aligned_cols=44 Identities=18% Similarity=0.446 Sum_probs=35.3
Q ss_pred CeeeccCCCCCCcC---ceeeccCCceechhchhhc-CC--CCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTV---PVFQCVNGHLACSDCCAKI-KR--NCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~---Pv~~c~cgH~fC~~C~~~~-~~--~Cp~C~~~~~ 97 (269)
+=|.|..|..+|.. +.+ -.-|..+|..|..+. .. .|..|..+|.
T Consensus 28 ~CF~C~~C~~~L~~~~~~~~-~~~g~~yC~~~y~~~~~~~~~C~~C~~~I~ 77 (131)
T 2xjy_A 28 DCLSCDLCGCRLGEVGRRLY-YKLGRKLCRRDYLRLFGQDGLCASCDKRIR 77 (131)
T ss_dssp TTCBCTTTCCBCSSTTCCEE-EETTEEECHHHHHHHHCCCEECTTTCCEEC
T ss_pred HHcccCcCCCccccCCCeEE-EECCEEeecCchhhhCCCccChhhcCCccC
Confidence 67899999999963 444 478999999999876 44 7999988764
No 133
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=66.38 E-value=2 Score=29.83 Aligned_cols=38 Identities=26% Similarity=0.801 Sum_probs=25.8
Q ss_pred eeccCCCCCCcCceeeccCCceechhchhhc--CCCCCCCCCCCc
Q 038068 55 FDCPICFEPLTVPVFQCVNGHLACSDCCAKI--KRNCPTCSSPTV 97 (269)
Q Consensus 55 l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~--~~~Cp~C~~~~~ 97 (269)
..||.|...+.. .-++..|..|-..+ ...||.|.+++.
T Consensus 3 ~~CP~C~~~l~~-----~~~~~~C~~C~~~~~~~afCPeCgq~Le 42 (81)
T 2jrp_A 3 ITCPVCHHALER-----NGDTAHCETCAKDFSLQALCPDCRQPLQ 42 (81)
T ss_dssp CCCSSSCSCCEE-----CSSEEECTTTCCEEEEEEECSSSCSCCC
T ss_pred CCCCCCCCcccc-----CCCceECccccccCCCcccCcchhhHHH
Confidence 679999987652 23455688887665 347888887664
No 134
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=64.50 E-value=4.7 Score=26.88 Aligned_cols=39 Identities=21% Similarity=0.423 Sum_probs=28.3
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc-CCCCCC
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI-KRNCPT 91 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~-~~~Cp~ 91 (269)
+=|.|..|...|....+...-|..+|..|..+. ...|..
T Consensus 34 ~CF~C~~C~~~L~~~~f~~~~g~~yC~~cy~~~f~~~C~~ 73 (76)
T 1x68_A 34 ECFNCGKCSVSLVGKGFLTQNKEIFCQKCGSGMDTDISGP 73 (76)
T ss_dssp GGCBCTTTCCBCSSSCEEEETTEEEETTTTCCCCCCSSSS
T ss_pred ccCChhhCCCcCCCCceEeECCEEECHHHhhhhhCCcCCC
Confidence 568899999988755444468899999998765 344543
No 135
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=63.89 E-value=6.3 Score=27.66 Aligned_cols=33 Identities=24% Similarity=0.642 Sum_probs=24.2
Q ss_pred CeeeccCCCCCCcCc--eeecc-CCceechhchhhc
Q 038068 53 DIFDCPICFEPLTVP--VFQCV-NGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~P--v~~c~-cgH~fC~~C~~~~ 85 (269)
+.-.|.+|...|..- -..|. ||.+||..|....
T Consensus 19 ~~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~~ 54 (90)
T 3t7l_A 19 EAPNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNRK 54 (90)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEE
T ss_pred cCCcCcCCCCcccchhhCccccCCCCEECCcccCCe
Confidence 456799999877532 23564 9999999998754
No 136
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=63.60 E-value=5.1 Score=26.08 Aligned_cols=33 Identities=21% Similarity=0.568 Sum_probs=25.3
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~ 85 (269)
+=|.|..|..+|....+.-.-|..+|..|..+.
T Consensus 30 ~CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~~ 62 (70)
T 2d8z_A 30 ECFVCTACRKQLSGQRFTARDDFAYCLNCFCDL 62 (70)
T ss_dssp TTSBCSSSCCBCTTSCCEESSSSEECHHHHHHH
T ss_pred CCCccCCCCCcCCcCceEeeCCeEECHHHHHHH
Confidence 568899999988754444467899999998765
No 137
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=63.32 E-value=6.5 Score=35.00 Aligned_cols=57 Identities=21% Similarity=0.426 Sum_probs=41.3
Q ss_pred eeeccCCCCCCcCceeeccCCceechhchhhc-------CCCCCCCCCCCcc---ccchhHHHHhhc
Q 038068 54 IFDCPICFEPLTVPVFQCVNGHLACSDCCAKI-------KRNCPTCSSPTVI---VRNWAIEKVIEL 110 (269)
Q Consensus 54 ~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~-------~~~Cp~C~~~~~~---~~~~~l~~~i~~ 110 (269)
.|.||+=...+..|+.-..|.|.-|-+=..-+ ...||+|...+.. ..+..+.+++..
T Consensus 215 SL~CPlS~~ri~~P~Rg~~C~HlqCFDl~sfL~~~~~~~~W~CPiC~k~~~~~dL~ID~~~~~IL~~ 281 (360)
T 4fo9_A 215 SLMCPLGKMRLTIPCRAVTCTHLQCFDAALYLQMNEKKPTWICPVCDKKAAYESLILDGLFMEILND 281 (360)
T ss_dssp ESBCTTTCSBCSSEEEETTCCCCCCEEHHHHHHHHHHSCCCBCTTTCSBCCGGGEEEBHHHHHHHTT
T ss_pred eeeCCCccceeccCCcCCCCCCCccCCHHHHHHHHhhCCCeECCCCCcccCHHHeEEcHHHHHHHHh
Confidence 57899999999999987789999765432211 4689999988753 345556666654
No 138
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=62.67 E-value=5.6 Score=26.93 Aligned_cols=29 Identities=21% Similarity=0.391 Sum_probs=23.4
Q ss_pred eeeeCCCCCCCCccC-hhHHhhhhhhhCCC
Q 038068 141 SPLPCPLSDCSFLGC-SSQFVRHFMAKHNI 169 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H~~ 169 (269)
+|+.|+.++|+.... ...|..|++..|..
T Consensus 26 KPYkC~~~~CgKaFsr~s~L~~H~rriHTg 55 (73)
T 1x3c_A 26 RPYRCVHQGCFAAFTIQQNLILHYQAVHKS 55 (73)
T ss_dssp CSCBCCSTTCCCBCSSHHHHHHHHHHHSSS
T ss_pred CCeECCCCCcChhHcCHHHHHHHhhhhCCC
Confidence 689998779998765 56899998777864
No 139
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=62.13 E-value=6.3 Score=27.55 Aligned_cols=57 Identities=23% Similarity=0.444 Sum_probs=41.5
Q ss_pred HhhcceecccCCCCCccccc--cccchhhhhccCCCeeeeCCCCCCCCccC-hhHHhhhhhhhCCC
Q 038068 107 VIELVQVNCKNAEYGCQQKM--SFSKKRGHEKTCQHSPLPCPLSDCSFLGC-SSQFVRHFMAKHNI 169 (269)
Q Consensus 107 ~i~~l~v~C~~~~~GC~~~~--~~~~~~~He~~C~~~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H~~ 169 (269)
....-.+.|+. |...+ ....|..|.+...-+|+.|+. |+.... ...|..|+...|..
T Consensus 29 ~~~~~~~~C~~----C~k~F~~~~~~L~~H~~~h~~k~~~C~~--Cgk~F~~~~~L~~H~~~~H~~ 88 (96)
T 2ctd_A 29 IVDKGSVSCPT----CQAVGRKTIEGLKKHMENCKQEMFTCHH--CGKQLRSLAGMKYHVMANHNS 88 (96)
T ss_dssp HHHTSCEECTT----TCSCEESSHHHHHHHHHHHCCCCCCCSS--SCCCCSSHHHHHHHHHHHTCC
T ss_pred hcCCCCcCCCC----CCCCcccCHHHHHHHHHHHCCCCeECCC--CCCeeCCHHHHHHHhHHhcCC
Confidence 34566788874 88877 456788887755667889984 987654 57899996667754
No 140
>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=61.90 E-value=14 Score=25.72 Aligned_cols=38 Identities=18% Similarity=0.438 Sum_probs=26.9
Q ss_pred CeeeccC--CCCCCcCceeecc-CCceechhchhhcCCCCCC
Q 038068 53 DIFDCPI--CFEPLTVPVFQCV-NGHLACSDCCAKIKRNCPT 91 (269)
Q Consensus 53 ~~l~C~i--C~~~l~~Pv~~c~-cgH~fC~~C~~~~~~~Cp~ 91 (269)
....|+. |......|+ .|. |+..||..=...-...|+.
T Consensus 24 ~~~~C~~~~Ck~~~~l~f-~C~~C~~~FC~~HR~~e~H~C~~ 64 (86)
T 1wfe_A 24 KSYSCSFKGCTDVELVAV-ICPYCEKNFCLRHRHQSDHDCEK 64 (86)
T ss_dssp CCEECCSTTCCCEESSCE-ECTTTCCEECGGGCSTGGGTCSS
T ss_pred CCCCCCCcCCCCCCccce-ECCCCCcccccccCCccCCCCCC
Confidence 5578999 998877786 688 9999986433322445654
No 141
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=61.72 E-value=7.7 Score=25.27 Aligned_cols=53 Identities=19% Similarity=0.362 Sum_probs=35.4
Q ss_pred eecccCCCCCccccccc-cchhhhhc-cCC--CeeeeCCCCCCCCcc-ChhHHhhhhhhhCCCC
Q 038068 112 QVNCKNAEYGCQQKMSF-SKKRGHEK-TCQ--HSPLPCPLSDCSFLG-CSSQFVRHFMAKHNIS 170 (269)
Q Consensus 112 ~v~C~~~~~GC~~~~~~-~~~~~He~-~C~--~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~ 170 (269)
++.|+. |...+.. ..|..|+. .-. -.++.|+. |+... ....|..|++..|...
T Consensus 15 ~~~C~~----C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~ 72 (77)
T 2ct1_A 15 PYECYI----CHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARKSDLGVHLRKQHSYS 72 (77)
T ss_dssp SEECTT----TCCEESCHHHHHHHHHHHSSSSCSSEECSS--SSCEESSHHHHHHHHHHTSCCS
T ss_pred CeECCC----cCchhCCHHHHHHHHHHhcCCCCCccCCCC--CCCccCCHHHHHHHHHHhCCCC
Confidence 456653 6655543 56677764 332 25789984 98765 4678999999988754
No 142
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=61.18 E-value=4.5 Score=26.50 Aligned_cols=39 Identities=23% Similarity=0.474 Sum_probs=26.9
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhcCCCCCC
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPT 91 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~~~~Cp~ 91 (269)
+=|.|..|...|....+.-.-|..+|..|..+.-..|+.
T Consensus 32 ~CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~~~~~~~~ 70 (72)
T 1x61_A 32 GCFVCSTCRAQLRGQHFYAVERRAYCEGCYVATLESGPS 70 (72)
T ss_dssp TTCBCSSSCCBCTTSCEEESSSCEEEHHHHHHHHHTCSS
T ss_pred cCCcccccCCcCCcCcCEeeCCeEECHHHHHHHHccCCC
Confidence 557888998888654334467889999988765234443
No 143
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=61.05 E-value=11 Score=26.81 Aligned_cols=84 Identities=14% Similarity=0.182 Sum_probs=52.5
Q ss_pred CCC--CCCCCCccccchh-HHHHhhcceecccCCCCCccccccc-cchhhhhccC-CCeeeeCCCCCCCCcc-ChhHHhh
Q 038068 88 NCP--TCSSPTVIVRNWA-IEKVIELVQVNCKNAEYGCQQKMSF-SKKRGHEKTC-QHSPLPCPLSDCSFLG-CSSQFVR 161 (269)
Q Consensus 88 ~Cp--~C~~~~~~~~~~~-l~~~i~~l~v~C~~~~~GC~~~~~~-~~~~~He~~C-~~~p~~Cp~~~C~~~g-~~~~l~~ 161 (269)
.|+ .|...+....... ..+.-..-...|+. |...+.. ..|..|+..- .-.++.|+...|+... ....|..
T Consensus 7 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~----C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~ 82 (124)
T 1ubd_C 7 ACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAE----CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 82 (124)
T ss_dssp ECCSTTCCCEESSHHHHHHHHGGGSCCCEECTT----TCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHH
T ss_pred cCCCCCCcCccCCHHHHHHHHHHcCCCCeECCC----CCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHH
Confidence 577 7877654322111 11111344567763 7776654 5778897653 3467899866798765 4578999
Q ss_pred hhhhhCCCCcccee
Q 038068 162 HFMAKHNISAVPFK 175 (269)
Q Consensus 162 Hl~~~H~~~~~~~~ 175 (269)
|+...+......+.
T Consensus 83 H~~~h~~~~~~~C~ 96 (124)
T 1ubd_C 83 HVRIHTGDRPYVCP 96 (124)
T ss_dssp HHHHHHCCCCCCCC
T ss_pred HHHHhCCCCceECC
Confidence 99877766555554
No 144
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=60.77 E-value=5.6 Score=25.82 Aligned_cols=37 Identities=27% Similarity=0.559 Sum_probs=26.2
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc-CCCC
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI-KRNC 89 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~-~~~C 89 (269)
+=|.|..|..+|....+.-.-|..+|..|..+. ...|
T Consensus 30 ~CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~~f~~~C 67 (69)
T 2cur_A 30 DCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVSGPS 67 (69)
T ss_dssp TTTBCTTTCCBCTTSCEEECSSCEEEHHHHHHHHTCSC
T ss_pred CcCEECCCCCCCCCCccEeECCEEECHHHhHHHhcCCC
Confidence 557888898888654444467888998888765 3344
No 145
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=60.13 E-value=3.7 Score=35.88 Aligned_cols=44 Identities=25% Similarity=0.591 Sum_probs=32.5
Q ss_pred CCeeeccCCCCCCcCceeec---cCC--ceechhchhhc---CCCCCCCCCC
Q 038068 52 QDIFDCPICFEPLTVPVFQC---VNG--HLACSDCCAKI---KRNCPTCSSP 95 (269)
Q Consensus 52 ~~~l~C~iC~~~l~~Pv~~c---~cg--H~fC~~C~~~~---~~~Cp~C~~~ 95 (269)
+..-.||+|.....--+..- .-| +..|+-|-..| ...||.|...
T Consensus 180 ~~~~~CPvCGs~P~~s~l~~~g~~~G~R~l~Cs~C~t~W~~~R~~C~~Cg~~ 231 (309)
T 2fiy_A 180 ESRTLCPACGSPPMAGMIRQGGKETGLRYLSCSLCACEWHYVRIKCSHCEES 231 (309)
T ss_dssp TTCSSCTTTCCCEEEEEEEC----CCEEEEEETTTCCEEECCTTSCSSSCCC
T ss_pred ccCCCCCCCCCcCceeEEeecCCCCCcEEEEeCCCCCEEeecCcCCcCCCCC
Confidence 45678999999766555431 245 57999999999 5689999765
No 146
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=60.02 E-value=6.3 Score=26.42 Aligned_cols=30 Identities=20% Similarity=0.528 Sum_probs=22.3
Q ss_pred eeccCCCCCCcCc--eeecc-CCceechhchhh
Q 038068 55 FDCPICFEPLTVP--VFQCV-NGHLACSDCCAK 84 (269)
Q Consensus 55 l~C~iC~~~l~~P--v~~c~-cgH~fC~~C~~~ 84 (269)
-.|.+|...|..- -..|. ||.+||..|...
T Consensus 12 ~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~~ 44 (73)
T 1vfy_A 12 DACMICSKKFSLLNRKHHCRSCGGVFCQEHSSN 44 (73)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEECGGGSCE
T ss_pred CcccCCCCccCCccccccCCCCCEEEcccccCC
Confidence 3799999987532 23564 999999999754
No 147
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=59.54 E-value=6.6 Score=27.77 Aligned_cols=84 Identities=14% Similarity=0.263 Sum_probs=53.0
Q ss_pred CCCCC--CCCCCccccch--hHHHHhhcceecccCCCCCccccccc-cchhhhhcc-CCCeeeeCCCCCCCCcc-ChhHH
Q 038068 87 RNCPT--CSSPTVIVRNW--AIEKVIELVQVNCKNAEYGCQQKMSF-SKKRGHEKT-CQHSPLPCPLSDCSFLG-CSSQF 159 (269)
Q Consensus 87 ~~Cp~--C~~~~~~~~~~--~l~~~i~~l~v~C~~~~~GC~~~~~~-~~~~~He~~-C~~~p~~Cp~~~C~~~g-~~~~l 159 (269)
..|+. |...+...... -+..-...-++.|++. .|...+.. ..|..|++. -.-.++.|+ .|+... ....|
T Consensus 7 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l 82 (119)
T 2jp9_A 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFK--DCERRFSRSDQLKRHQRRHTGVKPFQCK--TCQRKFSRSDHL 82 (119)
T ss_dssp BCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCST--TCCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHH
T ss_pred eeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCC--CCcCccCCHHHHHHHHHHcCCCCCccCC--ccCchhCCHHHH
Confidence 46876 88776543221 1222334556788753 58877654 567788764 234678998 498764 46789
Q ss_pred hhhhhhhCCCCccce
Q 038068 160 VRHFMAKHNISAVPF 174 (269)
Q Consensus 160 ~~Hl~~~H~~~~~~~ 174 (269)
..|+...+......+
T Consensus 83 ~~H~~~h~~~~~~~C 97 (119)
T 2jp9_A 83 KTHTRTHTGEKPFSC 97 (119)
T ss_dssp HHHHHHHHTCCCEEC
T ss_pred HHHHHHhcCCCCeeC
Confidence 999987766555554
No 148
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=58.97 E-value=8.7 Score=26.87 Aligned_cols=53 Identities=25% Similarity=0.434 Sum_probs=35.4
Q ss_pred cceecccCCCCCccccccc-cchhhhhccC-CCeeeeCCCCCCCCccC-hhHHhhhhhhhCC
Q 038068 110 LVQVNCKNAEYGCQQKMSF-SKKRGHEKTC-QHSPLPCPLSDCSFLGC-SSQFVRHFMAKHN 168 (269)
Q Consensus 110 ~l~v~C~~~~~GC~~~~~~-~~~~~He~~C-~~~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H~ 168 (269)
...+.|+. |...+.. ..|..|++.- .-.++.|+. |+.... ...|..|++..|.
T Consensus 35 ~~~~~C~~----C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~ 90 (110)
T 2csh_A 35 LRPYGCGV----CGKKFKMKHHLVGHMKIHTGIKPYECNI--CAKRFMWRDSFHRHVTSCTK 90 (110)
T ss_dssp CCSEECTT----TSCEESSSHHHHHHHTTTCCCCCEECSS--SCCEESCHHHHHHHHHHHHH
T ss_pred CcCccCCC----CCcccCCHHHHHHHHHHcCCCCCeeCCC--CcchhcCHHHHHHHHHHccc
Confidence 34566764 6665543 5667786642 345789985 987654 6789999988775
No 149
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.88 E-value=9.4 Score=21.85 Aligned_cols=25 Identities=20% Similarity=0.465 Sum_probs=19.2
Q ss_pred eeeeCCCCCCCCccC-hhHHhhhhhh
Q 038068 141 SPLPCPLSDCSFLGC-SSQFVRHFMA 165 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g~-~~~l~~Hl~~ 165 (269)
+|+.|+..+|+.... ...|..|++.
T Consensus 8 kp~~C~~~~C~k~F~~~~~L~~H~r~ 33 (38)
T 2eln_A 8 ILLKCPTDGCDYSTPDKYKLQAHLKV 33 (38)
T ss_dssp CCEECSSSSCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCccCCHHHHHHHHHh
Confidence 578998667998754 5689999765
No 150
>2vy4_A U11/U12 small nuclear ribonucleoprotein 48 kDa protein; splicing, mRNA processing, alternative splicing, transcription, nucleus, spliceosome; NMR {Homo sapiens} SCOP: g.37.1.7 PDB: 2vy5_A
Probab=58.76 E-value=2.9 Score=24.37 Aligned_cols=25 Identities=24% Similarity=0.387 Sum_probs=16.6
Q ss_pred eecccCCCCCccccccccchhhhhccCC
Q 038068 112 QVNCKNAEYGCQQKMSFSKKRGHEKTCQ 139 (269)
Q Consensus 112 ~v~C~~~~~GC~~~~~~~~~~~He~~C~ 139 (269)
.+.|||. ..-.+...+|..|...|.
T Consensus 5 ~v~CPyd---~~H~i~~~~l~~Hl~kC~ 29 (37)
T 2vy4_A 5 VVICPYD---SNHHMPKSSLAKHMASCR 29 (37)
T ss_dssp CEECTTT---SSCEECGGGHHHHHHHHH
T ss_pred EEECCCC---CCeEeCHHHHHHHHHHHh
Confidence 4667763 566777777777776664
No 151
>1rut_X Flinc4, fusion protein of LMO4 protein and LIM domain- binding protein 1; B-tandem zipper, protein binding; 1.30A {Mus musculus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 2dfy_X 2xjz_I 2xjy_B
Probab=57.79 E-value=3.3 Score=33.12 Aligned_cols=44 Identities=16% Similarity=0.501 Sum_probs=35.6
Q ss_pred CeeeccCCCCCCcC---ceeeccCCceechhchhhc-CC--CCCCCCCCCc
Q 038068 53 DIFDCPICFEPLTV---PVFQCVNGHLACSDCCAKI-KR--NCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~~---Pv~~c~cgH~fC~~C~~~~-~~--~Cp~C~~~~~ 97 (269)
+=|.|..|..+|.. +.+ ..-|..+|..|..+. .. .|..|..+|.
T Consensus 31 ~CF~C~~C~~~L~~~g~~~~-~~~g~~yC~~cy~~~~~~~~~C~~C~~~I~ 80 (188)
T 1rut_X 31 RCLKCSSCQAQLGDIGTSSY-TKSGMILCRNDYIRLFGNSGACSACGQSIP 80 (188)
T ss_dssp GGCBCTTTCCBHHHHCSEEE-EETTEEECHHHHHHHHSCCEECTTTCCEEC
T ss_pred cCcccCCCCcccccCCceEE-EeCCccccccccccccccCCccccCCCccc
Confidence 66899999999875 554 478999999999876 44 5999998775
No 152
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=57.62 E-value=7.8 Score=23.34 Aligned_cols=44 Identities=18% Similarity=0.381 Sum_probs=26.6
Q ss_pred ccccccc-cchhhhhcc-CCCeeeeCCCCCCCCcc-ChhHHhhhhhhhC
Q 038068 122 CQQKMSF-SKKRGHEKT-CQHSPLPCPLSDCSFLG-CSSQFVRHFMAKH 167 (269)
Q Consensus 122 C~~~~~~-~~~~~He~~-C~~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H 167 (269)
|...+.. ..|..|... -.-.|+.|+. |+... ....|..|+...|
T Consensus 10 C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~hh 56 (57)
T 3uk3_C 10 CGKFFRSNYYLNIHLRTHTGEKPYKCEF--CEYAAAQKTSLRYHLERHH 56 (57)
T ss_dssp TCCBCSCHHHHHHHHHHHHCCCCEECSS--SSCEESSHHHHHHHHHHHC
T ss_pred CcchhCChHHHHHHHHHcCCCCCcCCCC--CcchhCCHHHHHHHHHHhc
Confidence 4443332 344555443 1235788884 88764 4678999988776
No 153
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle; NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Probab=57.53 E-value=8 Score=30.85 Aligned_cols=44 Identities=20% Similarity=0.377 Sum_probs=29.9
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc-CCCCCCCCCCC
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI-KRNCPTCSSPT 96 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~-~~~Cp~C~~~~ 96 (269)
+=|.|..|..+|...-+.-.-|..+|..|..+. ...|..|...+
T Consensus 141 ~CF~C~~C~~~L~~~~~~~~~g~~yC~~cy~~~f~~kc~~C~~~~ 185 (192)
T 1b8t_A 141 SCFRCAKCGKSLESTTLADKDGEIYCKGCYAKNFGPKGFGFGQGA 185 (192)
T ss_dssp TTCBCTTTCCBCCSSSEEEETTEEEEHHHHHHHTCCCCCCCCCCC
T ss_pred hcCCccccCCCCCCCcccccCCEEeCHHHHHHhcCCcCCCCCCcc
Confidence 457788888877543333357788888887765 56777777654
No 154
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=57.26 E-value=8 Score=26.67 Aligned_cols=33 Identities=27% Similarity=0.569 Sum_probs=20.0
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~ 85 (269)
+=|.|..|..+|..-.+.-.-|..+|..|..+.
T Consensus 50 ~CF~C~~C~~~L~~~~f~~~~g~~yC~~cy~~~ 82 (90)
T 2dar_A 50 EEFNCAHCKNTMAYIGFVEEKGALYCELCYEKF 82 (90)
T ss_dssp TTCBCSSSCCBCSSSCBEESSSCEECHHHHHHH
T ss_pred cCCccCCCCCCCCCCEeEeECCEEECHHHHHHH
Confidence 456677777766643333356677777776654
No 155
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=57.05 E-value=4.5 Score=27.28 Aligned_cols=42 Identities=17% Similarity=0.315 Sum_probs=26.2
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc-CCCCCCCCC
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI-KRNCPTCSS 94 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~-~~~Cp~C~~ 94 (269)
+=|.|..|..+|..--+.-.-|..+|..|..+. ...|--|..
T Consensus 33 ~CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~~f~~~c~gcg~ 75 (81)
T 1a7i_A 33 CCFLCMVCRKNLDSTTVAIHDAEVYCKSCYGKKYGPKGYGYGQ 75 (81)
T ss_dssp SSEECSSSCCEECSSCCEEETTEEECSHHHHHHCC--------
T ss_pred ccCccCCCCCCCCCCCeEeeCCEEECHHHHHHHhCCcccccCC
Confidence 568899999988765334468899999998876 556766643
No 156
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=57.00 E-value=14 Score=25.89 Aligned_cols=105 Identities=20% Similarity=0.331 Sum_probs=58.3
Q ss_pred CeeeccC--CCCCCcCceeeccCCceechhchhhcCCCCC--CCCCCCccccch--hHHHHhhcceecccCCCCCccccc
Q 038068 53 DIFDCPI--CFEPLTVPVFQCVNGHLACSDCCAKIKRNCP--TCSSPTVIVRNW--AIEKVIELVQVNCKNAEYGCQQKM 126 (269)
Q Consensus 53 ~~l~C~i--C~~~l~~Pv~~c~cgH~fC~~C~~~~~~~Cp--~C~~~~~~~~~~--~l~~~i~~l~v~C~~~~~GC~~~~ 126 (269)
..+.|++ |...|...... -.|.- .-...-...|+ .|...+...... -+..-...-.+.|+. |...+
T Consensus 5 ~~~~C~~~~C~~~f~~~~~l--~~H~~--~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----C~~~f 76 (119)
T 2jp9_A 5 RPFMCAYPGCNKRYFKLSHL--QMHSR--KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKT----CQRKF 76 (119)
T ss_dssp CCBCCCSTTSCCCBSCHHHH--HHHHH--HHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTT----TCCEE
T ss_pred eeeeCCCCCCcchhCCHHHH--HHHHH--hhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCc----cCchh
Confidence 3467776 77766654311 12211 00001124688 688766532221 122233455678874 87766
Q ss_pred cc-cchhhhhcc-CCCeeeeCCCCCCCCcc-ChhHHhhhhhh
Q 038068 127 SF-SKKRGHEKT-CQHSPLPCPLSDCSFLG-CSSQFVRHFMA 165 (269)
Q Consensus 127 ~~-~~~~~He~~-C~~~p~~Cp~~~C~~~g-~~~~l~~Hl~~ 165 (269)
.. ..|..|.+. -.-.++.|+.+.|+... ....|..|++.
T Consensus 77 ~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~ 118 (119)
T 2jp9_A 77 SRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNM 118 (119)
T ss_dssp SCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHT
T ss_pred CCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhc
Confidence 54 577788653 23467889544799775 45789999763
No 157
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=56.89 E-value=9.4 Score=21.77 Aligned_cols=26 Identities=27% Similarity=0.667 Sum_probs=20.5
Q ss_pred eeeCCCCCCCCc-cChhHHhhhhhhhCCC
Q 038068 142 PLPCPLSDCSFL-GCSSQFVRHFMAKHNI 169 (269)
Q Consensus 142 p~~Cp~~~C~~~-g~~~~l~~Hl~~~H~~ 169 (269)
.+.||. |... .....|..|+...|..
T Consensus 5 GFiCP~--C~~~l~s~~~L~~Hye~~H~~ 31 (34)
T 3mjh_B 5 GFICPQ--CMKSLGSADELFKHYEAVHDA 31 (34)
T ss_dssp EEECTT--TCCEESSHHHHHHHHHHHTSS
T ss_pred ccCCcH--HHHHcCCHHHHHHHHHhcccc
Confidence 467985 8644 5778999999999975
No 158
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=56.73 E-value=7 Score=25.48 Aligned_cols=33 Identities=27% Similarity=0.487 Sum_probs=24.5
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~ 85 (269)
+=|.|..|..+|...-+.-.-|..+|..|..+.
T Consensus 32 ~CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~~ 64 (72)
T 1wyh_A 32 HCFLCSGCEQPLGSRSFVPDKGAHYCVPCYENK 64 (72)
T ss_dssp TTCBCTTTCCBTTTSCEEEETTEEEEHHHHHHH
T ss_pred ccCeECCCCCcCCCCccCCcCCeEECHHHHHHH
Confidence 557888898888764334467888999888765
No 159
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=56.21 E-value=11 Score=23.93 Aligned_cols=53 Identities=28% Similarity=0.536 Sum_probs=35.2
Q ss_pred eecccCCCCCccccccc-cchhhhhcc-CCCeeeeCCCCCCCCccC-hhHHhhhhhhhCCCC
Q 038068 112 QVNCKNAEYGCQQKMSF-SKKRGHEKT-CQHSPLPCPLSDCSFLGC-SSQFVRHFMAKHNIS 170 (269)
Q Consensus 112 ~v~C~~~~~GC~~~~~~-~~~~~He~~-C~~~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H~~~ 170 (269)
++.|+. |...+.. ..|..|++. -.-.++.|+. |+.... ...|..|+...|...
T Consensus 9 ~~~C~~----C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~ 64 (70)
T 1x5w_A 9 PEKCSE----CSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTKQPSNLSKHMKKFHGDM 64 (70)
T ss_dssp SEECSS----SSCEESSHHHHHHHHGGGCCSCSEECSS--SSCEESSHHHHHHHHHHHHSSS
T ss_pred CeECCC----CCcccCCHHHHHHHHHHcCCCCCEeCCC--CCCccCCHHHHHHHHHHHhCCC
Confidence 345653 6665543 466777665 2346789985 987654 578999998877653
No 160
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=55.63 E-value=6.8 Score=25.56 Aligned_cols=33 Identities=24% Similarity=0.499 Sum_probs=23.9
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~ 85 (269)
+=|.|..|..+|....+.-.-|..+|..|..+.
T Consensus 32 ~CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~~ 64 (72)
T 1x4k_A 32 TCFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQ 64 (72)
T ss_dssp TTTCCSSSCCCCCSSSEEEETTEEEEHHHHHHH
T ss_pred cCCcccccCCccCCCccCccCCeEECHHHHhHH
Confidence 557788888888765443467888888888765
No 161
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=55.62 E-value=12 Score=19.11 Aligned_cols=24 Identities=29% Similarity=0.386 Sum_probs=17.1
Q ss_pred eeeCCCCCCCCcc-ChhHHhhhhhh
Q 038068 142 PLPCPLSDCSFLG-CSSQFVRHFMA 165 (269)
Q Consensus 142 p~~Cp~~~C~~~g-~~~~l~~Hl~~ 165 (269)
|+.|+.+.|+... ....|..|...
T Consensus 2 p~~C~~~~C~k~f~~~~~L~~H~~~ 26 (31)
T 1sp2_A 2 PFMCTWSYCGKRFTRSDELQRHKRT 26 (31)
T ss_dssp CCBCCSTTCCCBCSSHHHHHHHHTT
T ss_pred CcCCcCCCCCcccCCHhHHHHHHHH
Confidence 5678755798764 45689999765
No 162
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.15 E-value=4.7 Score=26.85 Aligned_cols=39 Identities=18% Similarity=0.221 Sum_probs=29.1
Q ss_pred eeeccCCCCCCcCce---eeccCCceechhchhhcCCCCCCC
Q 038068 54 IFDCPICFEPLTVPV---FQCVNGHLACSDCCAKIKRNCPTC 92 (269)
Q Consensus 54 ~l~C~iC~~~l~~Pv---~~c~cgH~fC~~C~~~~~~~Cp~C 92 (269)
...|..|...+..+- +.|.||.+||+.=...-...|+..
T Consensus 15 ~~rC~~C~kk~gL~~~egf~CrCg~~FC~~HRy~e~H~C~fD 56 (67)
T 1x4w_A 15 RRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFD 56 (67)
T ss_dssp TTBCSSSCCBCCHHHHHHHCCSSSCCCCTTTCSTGGGTCSSC
T ss_pred CCcchhhCCeecccccCceEecCCCEehhccCCccccCCccc
Confidence 358999999888772 589999999986654434556654
No 163
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=55.11 E-value=9.7 Score=26.58 Aligned_cols=32 Identities=22% Similarity=0.402 Sum_probs=23.5
Q ss_pred CeeeccCCCCCCcCc--eeecc-CCceechhchhh
Q 038068 53 DIFDCPICFEPLTVP--VFQCV-NGHLACSDCCAK 84 (269)
Q Consensus 53 ~~l~C~iC~~~l~~P--v~~c~-cgH~fC~~C~~~ 84 (269)
+.-.|.+|...|..- -..|. ||.+||..|...
T Consensus 8 ~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~ 42 (88)
T 1wfk_A 8 MESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSF 42 (88)
T ss_dssp CCSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCE
T ss_pred cCCCCcCcCCcccCccccccCCCCCCEEChhHcCC
Confidence 345799999977533 23564 999999999765
No 164
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.73 E-value=7.8 Score=25.26 Aligned_cols=48 Identities=15% Similarity=0.200 Sum_probs=32.1
Q ss_pred ccccccc-cchhhhhccC----CCeeeeCCCCCCCCccC-hhHHhhhhhhhCCCCc
Q 038068 122 CQQKMSF-SKKRGHEKTC----QHSPLPCPLSDCSFLGC-SSQFVRHFMAKHNISA 171 (269)
Q Consensus 122 C~~~~~~-~~~~~He~~C----~~~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H~~~~ 171 (269)
|...+.. ..|..|++.- .-.++.|+. |+.... ...|..|++..|....
T Consensus 13 C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~ 66 (78)
T 2d9h_A 13 CGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKSHPALL 66 (78)
T ss_dssp SCCEESSHHHHHHHHHHHHHHTTTCCEECTT--TCCEESSHHHHHHHHHHTSTTTS
T ss_pred CCCeeCCHHHHHHHHHHhhccCCCcccCCCC--CCchhCCHHHHHHHHHHhCCCCC
Confidence 5555443 4556665432 246789985 987754 5789999999897643
No 165
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=54.58 E-value=7.6 Score=25.40 Aligned_cols=33 Identities=30% Similarity=0.607 Sum_probs=25.9
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~ 85 (269)
+=|.|..|...|....+.-.-|..+|..|..+.
T Consensus 34 ~CF~C~~C~~~L~~~~f~~~~g~~yC~~c~~~~ 66 (72)
T 1x4l_A 34 DCFNCKKCSLSLVGRGFLTERDDILCPDCGKDI 66 (72)
T ss_dssp TTCBCSSSCCBCTTSCCEECSSSEECHHHHHTC
T ss_pred ccCEeccCCCcCCCCccEeECCEEEChhHcCcc
Confidence 568899999988765444468899999998765
No 166
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=54.25 E-value=18 Score=23.29 Aligned_cols=46 Identities=22% Similarity=0.351 Sum_probs=29.5
Q ss_pred cccccc-ccchhhhhcc-CCCeeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 122 CQQKMS-FSKKRGHEKT-CQHSPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 122 C~~~~~-~~~~~~He~~-C~~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
|...+. ...|..|++. -.-.|+.|+. |+... ....|..|+...+..
T Consensus 24 C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~ 72 (77)
T 2cot_A 24 CGKSFSHSSDLSKHRRTHTGEKPYKCDE--CGKAFIQRSHLIGHHRVHTGS 72 (77)
T ss_dssp SCCBCSCHHHHHHHHTTTCCSCSEECSS--SCCEESSHHHHHHHGGGSCCC
T ss_pred CCcccCCHHHHHHHHHHcCCCcCeeCCC--CCCccCCHHHHHHHHHHhCCC
Confidence 555544 3466677654 2346789984 88764 456899998765543
No 167
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=54.25 E-value=17 Score=28.14 Aligned_cols=15 Identities=13% Similarity=0.266 Sum_probs=9.0
Q ss_pred Ceeec--cCCCCCCcCc
Q 038068 53 DIFDC--PICFEPLTVP 67 (269)
Q Consensus 53 ~~l~C--~iC~~~l~~P 67 (269)
..+.| ++|...|...
T Consensus 11 ~~~~C~~~~C~~~f~~~ 27 (190)
T 1tf6_A 11 KRYICSFADCGAAYNKN 27 (190)
T ss_dssp CCCBCSSTTTCCBCSSH
T ss_pred cceeCCCCCCcchhCCH
Confidence 44666 5677666543
No 168
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=54.15 E-value=13 Score=26.08 Aligned_cols=45 Identities=29% Similarity=0.576 Sum_probs=32.8
Q ss_pred CeeeccCCCCCCc-----Cceeec-cCCceechhchhhc----CCCCCCCCCCCc
Q 038068 53 DIFDCPICFEPLT-----VPVFQC-VNGHLACSDCCAKI----KRNCPTCSSPTV 97 (269)
Q Consensus 53 ~~l~C~iC~~~l~-----~Pv~~c-~cgH~fC~~C~~~~----~~~Cp~C~~~~~ 97 (269)
..-.|.||.+-+- .+..-| .|+--+|..|.+-- ...||.|+.++.
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCktrYk 69 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYK 69 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCC
T ss_pred CCCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHhccCccccccCCccc
Confidence 4458999998642 233344 48999999998754 568999988764
No 169
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=53.68 E-value=8.8 Score=28.57 Aligned_cols=33 Identities=15% Similarity=0.293 Sum_probs=23.2
Q ss_pred CeeeccCCCCCCcCc--eeec-cCCceechhchhhc
Q 038068 53 DIFDCPICFEPLTVP--VFQC-VNGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~P--v~~c-~cgH~fC~~C~~~~ 85 (269)
+...|..|...|..- -..| .||.+||+.|....
T Consensus 18 ~~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~ 53 (120)
T 1y02_A 18 LEPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQV 53 (120)
T ss_dssp --CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC-
T ss_pred ccCcccCcCCccccccccccCCCCCCeeCHHHhCCC
Confidence 446899999987643 2346 49999999998754
No 170
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=53.12 E-value=14 Score=24.45 Aligned_cols=53 Identities=21% Similarity=0.339 Sum_probs=33.0
Q ss_pred hcceecccCCCCCccccccc-cchhhhhcc-CCCeeeeCCCCCCCCcc-ChhHHhhhhhhhC
Q 038068 109 ELVQVNCKNAEYGCQQKMSF-SKKRGHEKT-CQHSPLPCPLSDCSFLG-CSSQFVRHFMAKH 167 (269)
Q Consensus 109 ~~l~v~C~~~~~GC~~~~~~-~~~~~He~~-C~~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H 167 (269)
..-.+.|+. |...+.. ..|..|... -.-.++.|+. |+... ....|..|+...+
T Consensus 31 ~~~~~~C~~----C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~H~ 86 (90)
T 1a1h_A 31 GQKPFQCRI----CMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERKRHTKIHL 86 (90)
T ss_dssp CCCCEECTT----TCCEESCHHHHHHHHHHHHCCCCEECTT--TCCEESSHHHHHHHHGGGG
T ss_pred CCCCccCCC----CCcccCCHHHHHHHHHHcCCCCCccCCC--CCchhCCHHHHHHHHHHhc
Confidence 344567764 6665543 456677643 2345788884 88764 4568889987644
No 171
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=53.08 E-value=10 Score=28.32 Aligned_cols=55 Identities=15% Similarity=0.259 Sum_probs=35.5
Q ss_pred cceecccCCCCCccccccc-cchhhhhccC-CCeeeeCCCCCCCCcc-ChhHHhhhhhhhCCCC
Q 038068 110 LVQVNCKNAEYGCQQKMSF-SKKRGHEKTC-QHSPLPCPLSDCSFLG-CSSQFVRHFMAKHNIS 170 (269)
Q Consensus 110 ~l~v~C~~~~~GC~~~~~~-~~~~~He~~C-~~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~ 170 (269)
.-++.|+. |...+.. ..|..|+..= .-.|+.|+. |+..- ....|..|++..|...
T Consensus 48 ~k~~~C~~----C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~hh~~~ 105 (133)
T 2lt7_A 48 EKKYPCRY----CEKVFPLAEYRTKHEIHHTGERRYQCLA--CGKSFINYQFMSSHIKSVHSQD 105 (133)
T ss_dssp CSCEECSS----SSCEESSHHHHHHHHHHHHTCCCEEESS--SCCEESSHHHHHHHHHHHTCCC
T ss_pred CCCeeCCc----cCeecccccchhhhccccCCCccccCCC--CCCCcCCHHHHHHHhHHhcCCC
Confidence 33456653 6655543 4566676532 235788984 98764 4678999999988653
No 172
>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}
Probab=52.45 E-value=7.5 Score=24.64 Aligned_cols=34 Identities=21% Similarity=0.523 Sum_probs=23.6
Q ss_pred ccchhhhhccCCCeeeeCCCCCCCC--ccChhHHhhhhhh
Q 038068 128 FSKKRGHEKTCQHSPLPCPLSDCSF--LGCSSQFVRHFMA 165 (269)
Q Consensus 128 ~~~~~~He~~C~~~p~~Cp~~~C~~--~g~~~~l~~Hl~~ 165 (269)
..+++.|..+|+.. .||+ |-- ......|+.|+..
T Consensus 16 ~kEl~~H~~sCp~g--qCPY--C~~~~e~tesAlQaHfkv 51 (57)
T 2k9h_A 16 AKELESHRQSCING--QCPY--CMTITEATESALQAHYSI 51 (57)
T ss_dssp TTTHHHHHHHHTTT--BCTT--TCCBCCSSHHHHHHHHTT
T ss_pred HHHHHHHhccCCCC--CCCc--ccCcCCcCHHHHHHHHHH
Confidence 46788998888875 6675 532 2356789999864
No 173
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=52.39 E-value=7.3 Score=31.96 Aligned_cols=33 Identities=30% Similarity=0.552 Sum_probs=24.3
Q ss_pred CeeeccCCCCCCcCc--eeecc-CCceechhchhhc
Q 038068 53 DIFDCPICFEPLTVP--VFQCV-NGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~P--v~~c~-cgH~fC~~C~~~~ 85 (269)
+.-.|.+|...|..- -..|. ||++||..|....
T Consensus 160 ~~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~Cs~~~ 195 (220)
T 1dvp_A 160 DGRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQ 195 (220)
T ss_dssp CCSBCTTTCCBCCSSSCCEECTTTCCEECSTTSCEE
T ss_pred CCCccCCCCCccCCcccccccCCcCCEEChHHhCCe
Confidence 346899999987532 23575 9999999997653
No 174
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=52.03 E-value=9.3 Score=29.72 Aligned_cols=115 Identities=16% Similarity=0.298 Sum_probs=59.4
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhcCCCCCCCCCCCccccch--hHHHHhhcceecccCCCCCccccccc-c
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVRNW--AIEKVIELVQVNCKNAEYGCQQKMSF-S 129 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~~~~Cp~C~~~~~~~~~~--~l~~~i~~l~v~C~~~~~GC~~~~~~-~ 129 (269)
..+.|++|...+...... -.|.-- -.......|+.|...+...... -+..-...-.+.|+. |...+.. .
T Consensus 20 ~~~~C~~C~~~f~~~~~l--~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----C~~~f~~~~ 91 (190)
T 2i13_A 20 KPYACPECGKSFSRSDHL--AEHQRT--HTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPE----CGKSFSQRA 91 (190)
T ss_dssp -----------CCSSHHH--HHGGGC--C---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTT----TCCEESCHH
T ss_pred CCCcCCCCccccCCHHHH--HHHHHH--cCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcc----cCCccCCHH
Confidence 558899999888765321 112110 0001124699998766532221 122223445678874 8776654 5
Q ss_pred chhhhhcc-CCCeeeeCCCCCCCCcc-ChhHHhhhhhhhCCCCccceeec
Q 038068 130 KKRGHEKT-CQHSPLPCPLSDCSFLG-CSSQFVRHFMAKHNISAVPFKYN 177 (269)
Q Consensus 130 ~~~~He~~-C~~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~~~~~~~~ 177 (269)
.|..|... -.-.++.|+ .|+... ....|..|+...+......+..+
T Consensus 92 ~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C 139 (190)
T 2i13_A 92 NLRAHQRTHTGEKPYACP--ECGKSFSQLAHLRAHQRTHTGEKPYKCPEC 139 (190)
T ss_dssp HHHHHHHHHHTCCCEECT--TTCCEESSHHHHHHHHHHHHCCCCEECTTT
T ss_pred HHHHHHHhcCCCCCCcCC--CCCCccCCHHHHHHHHHHhCCCCCeECCCC
Confidence 77888653 345678998 498765 45789999988776665555544
No 175
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=52.03 E-value=23 Score=27.35 Aligned_cols=88 Identities=11% Similarity=0.196 Sum_probs=50.1
Q ss_pred CCC--CCCCCCCccccchh--HHHHhhcceecccCCCCCccccccc-cchhhhh-ccC--CCeeeeCCCCCCCCcc-Chh
Q 038068 87 RNC--PTCSSPTVIVRNWA--IEKVIELVQVNCKNAEYGCQQKMSF-SKKRGHE-KTC--QHSPLPCPLSDCSFLG-CSS 157 (269)
Q Consensus 87 ~~C--p~C~~~~~~~~~~~--l~~~i~~l~v~C~~~~~GC~~~~~~-~~~~~He-~~C--~~~p~~Cp~~~C~~~g-~~~ 157 (269)
..| +.|...+....+.. +..-...-.+.|+.. .|...+.. ..|..|. ..- .-.++.|+...|+... ...
T Consensus 43 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~--~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~ 120 (190)
T 1tf6_A 43 FPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSD--GCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHN 120 (190)
T ss_dssp SCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSS--SCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHH
T ss_pred ccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCC--CCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHH
Confidence 468 77877665322211 111123345667632 57776654 5677887 322 2446778544688664 456
Q ss_pred HHhhhhhhhCCCCccceee
Q 038068 158 QFVRHFMAKHNISAVPFKY 176 (269)
Q Consensus 158 ~l~~Hl~~~H~~~~~~~~~ 176 (269)
.|..|+...+......+.+
T Consensus 121 ~L~~H~~~H~~~~~~~C~~ 139 (190)
T 1tf6_A 121 QLKVHQFSHTQQLPYECPH 139 (190)
T ss_dssp HHHHHHGGGSSSCSSBCCS
T ss_pred HHHHHHHHhCCCCCccCCC
Confidence 8888888766555555544
No 176
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=51.96 E-value=16 Score=25.01 Aligned_cols=46 Identities=20% Similarity=0.369 Sum_probs=33.0
Q ss_pred ccccccc-cchhhhhcc-CCCeeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 122 CQQKMSF-SKKRGHEKT-CQHSPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 122 C~~~~~~-~~~~~He~~-C~~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
|...+.. ..|..|++. =.-+|+.|+. |+... ....|..|++..|..
T Consensus 34 Cgk~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~ 82 (85)
T 2lv2_A 34 CGESFASKGAQERHLRLLHAAQVFPCKY--CPATFYSSPGLTRHINKCHPS 82 (85)
T ss_dssp SCCEESSHHHHHHHHHTTSCSSSEECTT--SSCEESSHHHHHHHHHTTCTT
T ss_pred CCCCcCcHHHHhhhhhhccCCCccCCCC--CCCEeCCHHHHHHhCcccCcC
Confidence 6666554 567778754 3456889984 98764 567899999988864
No 177
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=51.81 E-value=11 Score=33.69 Aligned_cols=41 Identities=17% Similarity=0.410 Sum_probs=29.6
Q ss_pred CCCCeeeccCCCCCCcC---ceeecc-CCceechhchhhcCCCCCC
Q 038068 50 TDQDIFDCPICFEPLTV---PVFQCV-NGHLACSDCCAKIKRNCPT 91 (269)
Q Consensus 50 ~~~~~l~C~iC~~~l~~---Pv~~c~-cgH~fC~~C~~~~~~~Cp~ 91 (269)
.....-.|..|...+.. .-++|. ||.++|..|..++. .|+.
T Consensus 353 ~~~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~~-~C~~ 397 (406)
T 2vrw_B 353 SFEETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVP-PCGR 397 (406)
T ss_dssp CCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGSC-CC--
T ss_pred cCCCCCCCccccchhceeCCCCCCCCCCcCccchhhhhhCC-CCCC
Confidence 34466789999998752 334676 99999999999885 3543
No 178
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=51.49 E-value=14 Score=23.64 Aligned_cols=53 Identities=19% Similarity=0.288 Sum_probs=33.1
Q ss_pred ceecccCCCCCccccccc-cchhhhhcc-CCCeeeeCCCCCCCCccC-hhHHhhhhhhhCCC
Q 038068 111 VQVNCKNAEYGCQQKMSF-SKKRGHEKT-CQHSPLPCPLSDCSFLGC-SSQFVRHFMAKHNI 169 (269)
Q Consensus 111 l~v~C~~~~~GC~~~~~~-~~~~~He~~-C~~~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H~~ 169 (269)
-++.|+. |...+.. ..|..|++. -.-.|+.|+. |+.... ...|..|++..+..
T Consensus 13 k~~~C~~----C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~ 68 (72)
T 1x6e_A 13 KPYGCVE----CGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLINHQRIHTSG 68 (72)
T ss_dssp CCEECSS----SCCEESSHHHHHHHHHGGGCSCCEECSS--SCCEESSHHHHHHHHHHHHSS
T ss_pred CCccCCC----CCCccCCHHHHHHHHHhcCCCCCeECCC--CCcccCCHHHHHHHHHhcCCC
Confidence 3456653 6655543 456677653 2346788984 887644 56899998765543
No 179
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=50.82 E-value=7.8 Score=25.18 Aligned_cols=33 Identities=27% Similarity=0.538 Sum_probs=24.4
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~ 85 (269)
+=|.|..|..+|..-.+.-.-|..+|..|..+.
T Consensus 30 ~CF~C~~C~~~L~~~~f~~~~g~~yC~~c~~~~ 62 (70)
T 2d8x_A 30 ECFRCDLCQEVLADIGFVKNAGRHLCRPCHNRE 62 (70)
T ss_dssp TTSBCSSSCCBCSSSCCEEETTEEECHHHHHHH
T ss_pred cCCEeCCCCCcCCCCccEeECCeEECHHHhhhh
Confidence 557888888888765444357888888888765
No 180
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=50.64 E-value=9.3 Score=25.29 Aligned_cols=33 Identities=24% Similarity=0.422 Sum_probs=23.3
Q ss_pred CeeeccCCCCCCcCceeeccCCceech-hchhhc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACS-DCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~-~C~~~~ 85 (269)
+=|.|..|..+|..-.+.-.-|..+|. .|..+.
T Consensus 35 ~CF~C~~C~~~L~~~~~~~~~g~~yC~~~cy~~~ 68 (76)
T 2cu8_A 35 FCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATL 68 (76)
T ss_dssp TTCBCSSSCCBCCTTSCEEETTEEECTTTHHHHH
T ss_pred CCCCCCCCCCccCCCceEeECCEEecchHHHHHh
Confidence 557888888888754333367888888 688765
No 181
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=49.09 E-value=19 Score=18.38 Aligned_cols=26 Identities=19% Similarity=0.407 Sum_probs=17.6
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhh
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAK 166 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~ 166 (269)
+|+.|+.+.|+... ....|..|....
T Consensus 2 k~~~C~~~~C~k~f~~~~~L~~H~~~H 28 (32)
T 1zfd_A 2 RPYSCDHPGCDKAFVRNHDLIRHKKSH 28 (32)
T ss_dssp CSBCCCCTTCCCCBSSSHHHHHHHGGG
T ss_pred CCCcCcCCCCCCccCCHHHHHHHHHHc
Confidence 35678755688664 456889997653
No 182
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=48.92 E-value=8.7 Score=24.60 Aligned_cols=33 Identities=18% Similarity=0.347 Sum_probs=23.5
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~ 85 (269)
+=|.|..|..+|....+.-.-|..+|..|..+.
T Consensus 30 ~CF~C~~C~~~L~~~~~~~~~g~~yC~~~y~~~ 62 (66)
T 1nyp_A 30 EHFVCAKCEKPFLGHRHYERKGLAYCETHYNQL 62 (66)
T ss_dssp TTCBCTTTCCBCSSSCCEEETTEEECHHHHHHH
T ss_pred CcCEECCCCCCCCCCceEeECCcEECHHHHHHH
Confidence 557888888887764333467888888887653
No 183
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=48.84 E-value=21 Score=28.50 Aligned_cols=42 Identities=21% Similarity=0.444 Sum_probs=29.0
Q ss_pred eccCCCCCCcC-----ceeecc-CCceechhchhhc--------------CCCCCCCCCCCc
Q 038068 56 DCPICFEPLTV-----PVFQCV-NGHLACSDCCAKI--------------KRNCPTCSSPTV 97 (269)
Q Consensus 56 ~C~iC~~~l~~-----Pv~~c~-cgH~fC~~C~~~~--------------~~~Cp~C~~~~~ 97 (269)
.||+|..+..+ ++++|. |...|=..|..-. ...||.|+..-.
T Consensus 4 ~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~ 65 (183)
T 3lqh_A 4 FCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHP 65 (183)
T ss_dssp BCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSS
T ss_pred cCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCC
Confidence 59999998654 377886 8866656665321 358999987654
No 184
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=48.09 E-value=9.4 Score=25.22 Aligned_cols=33 Identities=9% Similarity=0.066 Sum_probs=25.2
Q ss_pred CeeeccCCCCCCc-CceeeccCCceechhchhhc
Q 038068 53 DIFDCPICFEPLT-VPVFQCVNGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~-~Pv~~c~cgH~fC~~C~~~~ 85 (269)
+=|.|..|..+|. ...+.-.-|..+|..|..++
T Consensus 30 ~CF~C~~C~~~L~~~~~f~~~~~~~yC~~C~~~~ 63 (73)
T 1wig_A 30 SCALCVRCGQMFAEGEEMYLQGSSIWHPACRQAA 63 (73)
T ss_dssp TTSCCSSSCCCCCSSCCCEEETTEEECTTHHHHT
T ss_pred CcCEeCCCCCCCCCCCeeEeeCCEEEChHHChHh
Confidence 6689999999987 33233367899999998876
No 185
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=47.87 E-value=9.7 Score=31.46 Aligned_cols=31 Identities=26% Similarity=0.622 Sum_probs=23.2
Q ss_pred eeeccCCCCCCcCc--eeecc-CCceechhchhh
Q 038068 54 IFDCPICFEPLTVP--VFQCV-NGHLACSDCCAK 84 (269)
Q Consensus 54 ~l~C~iC~~~l~~P--v~~c~-cgH~fC~~C~~~ 84 (269)
.-.|.+|...|..- -..|. ||.+||..|...
T Consensus 164 ~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~Cs~~ 197 (226)
T 3zyq_A 164 AEECHRCRVQFGVMTRKHHCRACGQIFCGKCSSK 197 (226)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECTTTCCE
T ss_pred CCCCcCcCCCCCccccccccCCCcCEeChhhcCC
Confidence 34899999877632 23564 999999999764
No 186
>2iyb_E Testin, TESS, TES; LIM domain, SH3-binding, tumour supressor LIM domain EVH1 DO cell motility, phosphorylation, cytoskeleton; 2.35A {Homo sapiens}
Probab=47.62 E-value=9.6 Score=24.44 Aligned_cols=32 Identities=28% Similarity=0.590 Sum_probs=22.7
Q ss_pred CeeeccCCCCCCcCceeeccCCceec-hhchhh
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLAC-SDCCAK 84 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC-~~C~~~ 84 (269)
+=|.|..|..+|..--+.-.-|..+| ..|..+
T Consensus 31 ~CF~C~~C~~~L~~~~f~~~~g~~yC~~~C~~k 63 (65)
T 2iyb_E 31 ECFLCSCCSKCLIGQKFMPVEGMVFCSVECKKR 63 (65)
T ss_dssp TTSBCTTTCCBCTTSCCEEETTEEESSHHHHHT
T ss_pred CCEECCCCCCcCCCCceEEECCEEecCHHHhhh
Confidence 45788888888865433346788888 788754
No 187
>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.02 E-value=9.9 Score=24.91 Aligned_cols=37 Identities=14% Similarity=0.358 Sum_probs=25.2
Q ss_pred eeeccC--CCCCCcCceeecc-CCceechhchhhcCCCCCC
Q 038068 54 IFDCPI--CFEPLTVPVFQCV-NGHLACSDCCAKIKRNCPT 91 (269)
Q Consensus 54 ~l~C~i--C~~~l~~Pv~~c~-cgH~fC~~C~~~~~~~Cp~ 91 (269)
.-.|+. |...-..|+ .|. |+..||..=...-...|+.
T Consensus 12 ~~~Cs~~~Ck~~~ll~f-~C~~C~~~FC~~HR~~e~H~C~~ 51 (63)
T 1x4v_A 12 TNKCERAGCRQREMMKL-TCERCSRNFCIKHRHPLDHDCSG 51 (63)
T ss_dssp CCCCCSTTCCCCCSSCC-BCSSSCCBCCHHHHSTTSSCCCS
T ss_pred CCCCCccCCCCCCccce-ECCCCCcccCcccCCccCCcCCC
Confidence 357888 998766676 688 9999986433322455654
No 188
>2l7x_A Envelope glycoprotein; cytoplasmic tail, viral protein; NMR {Crimean-congo hemorrhagic fever virus}
Probab=46.44 E-value=7.4 Score=25.95 Aligned_cols=34 Identities=24% Similarity=0.437 Sum_probs=20.7
Q ss_pred cccchhhhhccCCCeeeeCCCCCCCCccChhHHhhhhh
Q 038068 127 SFSKKRGHEKTCQHSPLPCPLSDCSFLGCSSQFVRHFM 164 (269)
Q Consensus 127 ~~~~~~~He~~C~~~p~~Cp~~~C~~~g~~~~l~~Hl~ 164 (269)
...+.+-|+..|.|. .||+ |.-..+..-|..|..
T Consensus 17 n~~DqelHdlnCs~N--iCPY--C~nRls~eGl~RHV~ 50 (77)
T 2l7x_A 17 NAIDAEMHDLNCSYN--ICPY--CASRLTSDGLARHVT 50 (77)
T ss_dssp SHHHHHHHHHHHTTT--CCTT--TCCCCCTTTHHHHHT
T ss_pred cHHHHHHHHcCCCcc--cChh--hhccCCccchhhhcc
Confidence 344555666667665 4564 666666666777753
No 189
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=46.38 E-value=5 Score=26.00 Aligned_cols=23 Identities=22% Similarity=0.590 Sum_probs=14.3
Q ss_pred eeccCCCCCCcCceeeccCCceechh
Q 038068 55 FDCPICFEPLTVPVFQCVNGHLACSD 80 (269)
Q Consensus 55 l~C~iC~~~l~~Pv~~c~cgH~fC~~ 80 (269)
-.||-|..++...- .|.|+.|..
T Consensus 7 k~CP~C~~~Iek~~---GCnhmtC~~ 29 (60)
T 1wd2_A 7 KECPKCHVTIEKDG---GCNHMVCRN 29 (60)
T ss_dssp CCCTTTCCCCSSCC---SCCSSSCCS
T ss_pred eECcCCCCeeEeCC---CCCcEEECC
Confidence 47999998876541 344555444
No 190
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=46.34 E-value=9.7 Score=25.15 Aligned_cols=33 Identities=21% Similarity=0.503 Sum_probs=21.9
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~ 85 (269)
+=|.|..|..+|..--+.-.-|..+|..|..+.
T Consensus 38 ~CF~C~~C~~~L~~~~~~~~~g~~yC~~~y~~~ 70 (77)
T 1g47_A 38 QCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQML 70 (77)
T ss_dssp TTCCCTTTCCCCGGGCSEEETTEEECHHHHHHH
T ss_pred ccCeECCCCCCCCCCCeEeECCeEeCHHHHHHH
Confidence 457778888777653233357778888887665
No 191
>1x3h_A Leupaxin; paxillin family, protein-protein interaction, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=46.20 E-value=15 Score=24.33 Aligned_cols=37 Identities=19% Similarity=0.351 Sum_probs=25.1
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc-CCCC
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI-KRNC 89 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~-~~~C 89 (269)
+=|.|..|..+|...-+.-.-|..+|..|..+. ...|
T Consensus 40 ~CF~C~~C~~~L~~~~~~~~~~~~yC~~~y~~~f~~~C 77 (80)
T 1x3h_A 40 ECFVCGDCFTSFSTGSFFELDGRPFCELHYHHRRGSGP 77 (80)
T ss_dssp TTCBCSSSCCBSCSSCCEESSSCEECHHHHHHHHSSSC
T ss_pred CcCChhhCCCCCCCCcEEeECCEEECHHHHHHHcCCCC
Confidence 557888888888753333367888888887765 3344
No 192
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=45.64 E-value=9.1 Score=25.33 Aligned_cols=32 Identities=28% Similarity=0.551 Sum_probs=19.0
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhh
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAK 84 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~ 84 (269)
+=|.|..|..+|....+.-.-|..+|..|..+
T Consensus 45 ~CF~C~~C~~~L~~~~f~~~~~~~yC~~cy~~ 76 (77)
T 2egq_A 45 YCFHCKKCSVNLANKRFVFHQEQVYCPDCAKK 76 (77)
T ss_dssp TTCBCSSSCCBCTTSCCCEETTEECCHHHHHH
T ss_pred ccCEehhcCCCCCCCccEeECCEEEChHHhcc
Confidence 44667777776654433334667777776643
No 193
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=45.15 E-value=0.72 Score=31.52 Aligned_cols=75 Identities=12% Similarity=0.165 Sum_probs=39.0
Q ss_pred CCCCCCCCCccccch--hHHHHhhcceecccCCCCCccccccc-cchhhhhccCCCeeeeCCCCCCCCcc-ChhHHhhhh
Q 038068 88 NCPTCSSPTVIVRNW--AIEKVIELVQVNCKNAEYGCQQKMSF-SKKRGHEKTCQHSPLPCPLSDCSFLG-CSSQFVRHF 163 (269)
Q Consensus 88 ~Cp~C~~~~~~~~~~--~l~~~i~~l~v~C~~~~~GC~~~~~~-~~~~~He~~C~~~p~~Cp~~~C~~~g-~~~~l~~Hl 163 (269)
.|+.|...+...... -+..-...-++.|+. |...+.. ..|..|.+.-.-.++.|+ .|+... ....|..|+
T Consensus 5 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~----C~k~f~~~~~L~~H~~~h~~~~~~c~--~C~~~f~~~~~L~~H~ 78 (88)
T 1llm_C 5 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDI----CGRKFARSDERKRHRDIQHILPILED--KVEELLSKNYHLENEV 78 (88)
T ss_dssp ECTTTCCEESCHHHHHHHHHHHHCCCCEECTT----TCCEESSHHHHHHHHHHHTHHHHHHH--HHHHHHHHHHHHHHHH
T ss_pred cCCCCCCccCCHHHHHHHHHHcCCCCCccCCC----CCCccCCHHHHHHHHHHhCCCcchHH--HHHHHHHHHhhhHHHH
Confidence 466666554422111 111223344566653 6655543 456666654434566666 476543 345677777
Q ss_pred hhhCC
Q 038068 164 MAKHN 168 (269)
Q Consensus 164 ~~~H~ 168 (269)
...|.
T Consensus 79 ~~~h~ 83 (88)
T 1llm_C 79 ARLKK 83 (88)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77664
No 194
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.61 E-value=11 Score=25.27 Aligned_cols=33 Identities=30% Similarity=0.722 Sum_probs=23.0
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~ 85 (269)
+=|.|..|..+|..-.+.-.-|..+|..|..+.
T Consensus 42 ~CF~C~~C~~~L~~~~f~~~~~~~~C~~c~~~~ 74 (82)
T 2ehe_A 42 GCFRCCRCQRSLADEPFTCQDSELLCNDCYCSA 74 (82)
T ss_dssp TTSBCTTTCCBCSSCCEEEETTEEEETTTSSCC
T ss_pred cCCeecCCCCccCCCccEeeCCEEECHHHHhhh
Confidence 457788888887754333457788888887654
No 195
>2cuq_A Four and A half LIM domains 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=44.43 E-value=16 Score=24.26 Aligned_cols=33 Identities=21% Similarity=0.522 Sum_probs=23.2
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~ 85 (269)
+=|.|..|..+|..-.+.-.-|..+|..|..+.
T Consensus 40 ~CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~~ 72 (80)
T 2cuq_A 40 ECLVCTGCQTPLAGQQFTSRDEDPYCVACFGEL 72 (80)
T ss_dssp TTCBCSSSCCBCTTCCEEECSSSEEEHHHHHHH
T ss_pred hhCCcccCCCcCCCCeeEeECCEEECHHHHHHH
Confidence 557788888888643333367888888888765
No 196
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=44.32 E-value=57 Score=22.11 Aligned_cols=38 Identities=18% Similarity=0.538 Sum_probs=26.3
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc-CCCCC
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI-KRNCP 90 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~-~~~Cp 90 (269)
+=|.|..|..+|..--+.-.-|..+|..|..+. ...|.
T Consensus 41 ~CF~C~~C~~~L~~~~~~~~~g~~yC~~~y~~~f~~kc~ 79 (91)
T 2d8y_A 41 SCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGN 79 (91)
T ss_dssp TTCBCTTTCCBCCTTTCCCSSSCCCCHHHHHHHSCCCSC
T ss_pred CCCeeCCCCCCCCCCCcEeECCEEECHHHHHHHhCCCcC
Confidence 457788888888764233467888888888766 44554
No 197
>2a25_A Ubiquitin ligase SIAH1; protein-peptide complex, ligase; 2.20A {Homo sapiens} PDB: 2an6_A 1k2f_A
Probab=43.90 E-value=8.1 Score=31.13 Aligned_cols=46 Identities=15% Similarity=0.179 Sum_probs=21.5
Q ss_pred CCCCCccccchhHHHHhhcceecccCCCCCccccccccchhhhhcc
Q 038068 92 CSSPTVIVRNWAIEKVIELVQVNCKNAEYGCQQKMSFSKKRGHEKT 137 (269)
Q Consensus 92 C~~~~~~~~~~~l~~~i~~l~v~C~~~~~GC~~~~~~~~~~~He~~ 137 (269)
|...+.+..-...|+...-.+..||.....|.|.+.+.++..|...
T Consensus 16 C~~~~~y~~~~~He~~C~f~p~~Cp~~g~~C~~~G~~~~l~~H~~~ 61 (193)
T 2a25_A 16 CEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMH 61 (193)
T ss_dssp --------------------CEECCCC--CCCCEECSTTHHHHHHH
T ss_pred CCcccccccccchhhcCCCCCccCCCCCCCCcCCCCHHHHHHHHHH
Confidence 5555555555667888888899999863349999999999999865
No 198
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle; NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Probab=43.74 E-value=13 Score=29.53 Aligned_cols=43 Identities=16% Similarity=0.312 Sum_probs=33.9
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc-CCCCCCCCCC
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI-KRNCPTCSSP 95 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~-~~~Cp~C~~~ 95 (269)
+=|.|..|..+|....+.-.-|..+|..|..+. ...|..|...
T Consensus 33 ~CF~C~~C~~~L~~~~~~~~~g~~yC~~cy~~~f~~~c~~c~~~ 76 (192)
T 1b8t_A 33 SCFLCMVCKKNLDSTTVAVHGDEIYCKSCYGKKYGPKGKGKGMG 76 (192)
T ss_dssp TTCBCTTTCCBCCSSSEEEETTEEEEHHHHHHHHSCCCCCCCCC
T ss_pred CCCcCcccCCcCCCCeeEecCCEeeChhhhHhhcCccccccccc
Confidence 678999999999876444468999999999887 6677777543
No 199
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=43.54 E-value=19 Score=20.87 Aligned_cols=28 Identities=11% Similarity=0.223 Sum_probs=19.9
Q ss_pred CCeeeeCCCCCCCCccC-hhHHhhhhhhh
Q 038068 139 QHSPLPCPLSDCSFLGC-SSQFVRHFMAK 166 (269)
Q Consensus 139 ~~~p~~Cp~~~C~~~g~-~~~l~~Hl~~~ 166 (269)
.-+|+.|+++.|+.... ...|..|....
T Consensus 15 ~~k~~~C~~~~C~k~F~~~~~L~~H~~~H 43 (47)
T 1ncs_A 15 PDKTFECLFPGCTKTFKRRYNIRSHIQTH 43 (47)
T ss_dssp TTTEEECCCTTCCCEECSSSSHHHHHHHH
T ss_pred CCCCeECCCCCCCCccCCHHHHHHHHHHc
Confidence 34688997657987654 46789997653
No 200
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=42.84 E-value=38 Score=22.76 Aligned_cols=44 Identities=18% Similarity=0.424 Sum_probs=26.9
Q ss_pred CCeeeccCCCCCC--cCceeecc-CCceechhchhhc--------CCCCCCCCCCC
Q 038068 52 QDIFDCPICFEPL--TVPVFQCV-NGHLACSDCCAKI--------KRNCPTCSSPT 96 (269)
Q Consensus 52 ~~~l~C~iC~~~l--~~Pv~~c~-cgH~fC~~C~~~~--------~~~Cp~C~~~~ 96 (269)
.+...| +|..+. ...+++|. |...|=..|+.-. ...||.|+...
T Consensus 10 ~~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 10 LVPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred CCccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 356678 899876 45566775 6544444555321 34688887643
No 201
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=42.63 E-value=16 Score=28.32 Aligned_cols=32 Identities=22% Similarity=0.587 Sum_probs=23.3
Q ss_pred CeeeccCCCCCCc---Cceeec-cCCceechhchhh
Q 038068 53 DIFDCPICFEPLT---VPVFQC-VNGHLACSDCCAK 84 (269)
Q Consensus 53 ~~l~C~iC~~~l~---~Pv~~c-~cgH~fC~~C~~~ 84 (269)
..-.|.+|..+|. .+-.+| .|.|.+|..|-..
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~~ 102 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSHA 102 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEEC
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhcccccc
Confidence 4578999999853 222345 4999999999843
No 202
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=42.49 E-value=8.2 Score=20.40 Aligned_cols=13 Identities=15% Similarity=0.342 Sum_probs=5.0
Q ss_pred CCCccChhHHhhh
Q 038068 150 CSFLGCSSQFVRH 162 (269)
Q Consensus 150 C~~~g~~~~l~~H 162 (269)
|...++...+..|
T Consensus 12 cqq~mpaahin~h 24 (29)
T 3vhs_A 12 CQQMMPAAHINSH 24 (29)
T ss_dssp TCCEEEGGGHHHH
T ss_pred HHHhCcHHHHHHH
Confidence 4433333333333
No 203
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=42.01 E-value=14 Score=28.03 Aligned_cols=33 Identities=21% Similarity=0.487 Sum_probs=23.8
Q ss_pred CeeeccCCCCCCc---Cceeec-cCCceechhchhhc
Q 038068 53 DIFDCPICFEPLT---VPVFQC-VNGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~---~Pv~~c-~cgH~fC~~C~~~~ 85 (269)
..-.|.+|...|. .+-.+| .|.|.+|.+|-...
T Consensus 54 ~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~ 90 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVET 90 (134)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEEC
T ss_pred CCccccccCCCcccccCCCCCCCCCCcccccccCCcc
Confidence 4568999999883 122245 59999999997754
No 204
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=41.20 E-value=19 Score=24.16 Aligned_cols=32 Identities=22% Similarity=0.289 Sum_probs=23.5
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~ 85 (269)
+=|.|..|...|.... .-.-|..+|..|..+.
T Consensus 41 ~CF~C~~C~~~L~~~~-~~~~g~~yC~~~y~~~ 72 (80)
T 2dj7_A 41 SCFKCQTCSVILTGEY-ISKDGVPYCESDYHAQ 72 (80)
T ss_dssp TTCBCSSSCCBCSSCC-EEETTEEECTTHHHHH
T ss_pred ccCCcCcCCCCcCCCe-EEECCEEECHHHHHHH
Confidence 5678888888887543 3367888888888765
No 205
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.72 E-value=25 Score=20.01 Aligned_cols=27 Identities=22% Similarity=0.495 Sum_probs=18.4
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKH 167 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H 167 (269)
+|+.|+.+.|+... ....|..|.....
T Consensus 11 k~~~C~~~~C~k~f~~~~~L~~H~~~H~ 38 (48)
T 2ent_A 11 KPFACTWPGCGWRFSRSDELSRHRRSHS 38 (48)
T ss_dssp CCEECCSSSCCCEESSHHHHHHHHTTSC
T ss_pred CCeECCCCCCCCccCCHHHHHHHHHHhC
Confidence 56788755688664 4568899976533
No 206
>1lpv_A Doublesex protein; transcription, drosophila melanogaster, DNA binding, gene regulation,; NMR {Synthetic} SCOP: g.62.1.1
Probab=40.22 E-value=6.5 Score=24.74 Aligned_cols=29 Identities=21% Similarity=0.597 Sum_probs=22.1
Q ss_pred ccccccccchhhhhccCCCeeeeCCCCCCCC
Q 038068 122 CQQKMSFSKKRGHEKTCQHSPLPCPLSDCSF 152 (269)
Q Consensus 122 C~~~~~~~~~~~He~~C~~~p~~Cp~~~C~~ 152 (269)
|........++.|...|+|+.|.|. .|..
T Consensus 13 CrNHG~~~~lKGHKr~C~~r~C~C~--kC~l 41 (52)
T 1lpv_A 13 CRNHGLKITLKGHKRYCKFRYCTCE--KCRL 41 (52)
T ss_dssp HHTTTCCCTTTTCGGGCTTTTCCSH--HHHH
T ss_pred cccCCCccccCCccCccCCCCCcCC--CCcC
Confidence 3444556788999999999999997 4654
No 207
>2l7x_A Envelope glycoprotein; cytoplasmic tail, viral protein; NMR {Crimean-congo hemorrhagic fever virus}
Probab=40.17 E-value=23 Score=23.58 Aligned_cols=50 Identities=14% Similarity=0.363 Sum_probs=30.0
Q ss_pred CCCCCCCCCCccccchhHHHHhhcceecccCCCCCccccccccchhhhhccCCCe
Q 038068 87 RNCPTCSSPTVIVRNWAIEKVIELVQVNCKNAEYGCQQKMSFSKKRGHEKTCQHS 141 (269)
Q Consensus 87 ~~Cp~C~~~~~~~~~~~l~~~i~~l~v~C~~~~~GC~~~~~~~~~~~He~~C~~~ 141 (269)
..|-.|.+.....-+..|..+-=++. -||| |...++-..+..|...||.+
T Consensus 6 ~~C~kCEq~~vn~~DqelHdlnCs~N-iCPY----C~nRls~eGl~RHV~~CPKR 55 (77)
T 2l7x_A 6 QTCTICETTPVNAIDAEMHDLNCSYN-ICPY----CASRLTSDGLARHVTQCPKR 55 (77)
T ss_dssp CCCTTTCCCCSSHHHHHHHHHHHTTT-CCTT----TCCCCCTTTHHHHHTTCSHH
T ss_pred ceeeeeccccccHHHHHHHHcCCCcc-cChh----hhccCCccchhhhcccCccH
Confidence 45777765433333333333322222 4777 77788888889998888765
No 208
>2dlo_A Thyroid receptor-interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=39.87 E-value=18 Score=24.10 Aligned_cols=33 Identities=18% Similarity=0.422 Sum_probs=22.4
Q ss_pred CeeeccCCCCCCcCceeecc-CCceechhchhhc
Q 038068 53 DIFDCPICFEPLTVPVFQCV-NGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~-cgH~fC~~C~~~~ 85 (269)
+=|.|..|..+|...-+.-. -|..+|..|..+.
T Consensus 40 ~CF~C~~C~~~L~~~~f~~~~~g~~yC~~cy~~~ 73 (81)
T 2dlo_A 40 GCFTCVVCHRGLDGIPFTVDATSQIHCIEDFHRK 73 (81)
T ss_dssp TTCBCSSSCCBCTTSCEECCTTCCCEEHHHHHHH
T ss_pred HhcCcccCCCccCCCeeEECCCCEEECHHHHHHH
Confidence 55778888887775544323 5778888887665
No 209
>2cor_A Pinch protein; LIM domain, particularly interesting NEW Cys- His protein, LIM and senescent cell antigen-like domains 1, structural genomics; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=39.62 E-value=23 Score=23.64 Aligned_cols=32 Identities=34% Similarity=0.659 Sum_probs=25.2
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~ 85 (269)
+=|.|..|..+|..-.+ -.-|..+|..|..+.
T Consensus 40 ~CF~C~~C~~~L~~~~f-~~~g~~yC~~cy~~~ 71 (79)
T 2cor_A 40 DHFNCANCGKELTADAR-ELKGELYCLPCHDKM 71 (79)
T ss_dssp TTSBCSSSCCBCCTTCE-EETTEEECHHHHHTT
T ss_pred CCCEeCCCCCccCCCCE-eECCEEeCHHHHHHh
Confidence 56889999988876655 367889999998765
No 210
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.38 E-value=26 Score=19.74 Aligned_cols=29 Identities=24% Similarity=0.368 Sum_probs=19.9
Q ss_pred CeeeeCCCCCCCCcc-ChhHHhhhhhhhCCCC
Q 038068 140 HSPLPCPLSDCSFLG-CSSQFVRHFMAKHNIS 170 (269)
Q Consensus 140 ~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~ 170 (269)
-+|+.|+. |+... ....|..|....+...
T Consensus 10 ~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2eme_A 10 EKPYVCDY--CGKAFGLSAELVRHQRIHTGEK 39 (46)
T ss_dssp CCSEECSS--SCCEESSHHHHHHHHGGGCCCS
T ss_pred CCCeECCC--CChhhCCHHHHHHHHHhcCCCC
Confidence 35788884 88764 4578999987644443
No 211
>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=38.83 E-value=20 Score=24.30 Aligned_cols=36 Identities=19% Similarity=0.477 Sum_probs=25.9
Q ss_pred eeccC--CCCCCcCceeecc-CCceechhchhhcCCCCCC
Q 038068 55 FDCPI--CFEPLTVPVFQCV-NGHLACSDCCAKIKRNCPT 91 (269)
Q Consensus 55 l~C~i--C~~~l~~Pv~~c~-cgH~fC~~C~~~~~~~Cp~ 91 (269)
-.|.. |...-.-|+ .|. |+.+||..=+..-...|+.
T Consensus 15 ~~Cs~~~C~~~dflpf-~C~~C~~~FC~~HR~~e~H~C~~ 53 (75)
T 1wys_A 15 QHCQVQHCRQRDFLPF-VCDGCSGIFCLEHRSKDSHGCSE 53 (75)
T ss_dssp CCCSCTTTCCCSCCCE-ECTTTCCEECSTTCSSGGGTCCC
T ss_pred CCcCcccCCCccceee-ECcccCcCcCcccCCccccCCCC
Confidence 47888 999877787 688 9999987433333456765
No 212
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=38.24 E-value=30 Score=24.76 Aligned_cols=55 Identities=24% Similarity=0.379 Sum_probs=39.0
Q ss_pred hcceecccCCCCCccccccc-cchhhhhccCCCeeeeCCCCCCCCccC-hhHHhhhhhhhCCCC
Q 038068 109 ELVQVNCKNAEYGCQQKMSF-SKKRGHEKTCQHSPLPCPLSDCSFLGC-SSQFVRHFMAKHNIS 170 (269)
Q Consensus 109 ~~l~v~C~~~~~GC~~~~~~-~~~~~He~~C~~~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H~~~ 170 (269)
..-+..|+. |...+.. ..|..|...= -.|+.|+. |+.... ...|..|....|.+.
T Consensus 71 ~~~~~~C~~----C~k~f~~~~~l~~H~~~H-~~~~~C~~--C~k~f~~~~~l~~H~~~h~~~~ 127 (129)
T 2wbt_A 71 AISQFVCPL----CLMPFSSSVSLKQHIRYT-EHTKVCPV--CKKEFTSTDSALDHVCKKHNIC 127 (129)
T ss_dssp HHCSEECTT----TCCEESSHHHHHHHHHHT-CCCCBCTT--TCCBCSSHHHHHHHHHHTTCCC
T ss_pred CCCCeECCC----CCcccCCHhHHHHHHHHC-CCCCCCCC--CCcccCCHHHHHHHHHHHCCcc
Confidence 345677874 7776654 5677887653 56788984 987654 568999999888763
No 213
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=38.14 E-value=21 Score=23.81 Aligned_cols=33 Identities=21% Similarity=0.455 Sum_probs=20.2
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~ 85 (269)
+=|.|..|..+|..-.+.-.-|..+|..|..+.
T Consensus 42 ~CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~~ 74 (82)
T 1x63_A 42 DCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETK 74 (82)
T ss_dssp TTCCCSSSCCCCTTSCEEEETTEEEEHHHHHHH
T ss_pred ccCchhhCCCccCCCccEeeCCEEECHHHHHHH
Confidence 446677777776644333356777777776654
No 214
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=37.69 E-value=21 Score=23.58 Aligned_cols=30 Identities=30% Similarity=0.657 Sum_probs=22.6
Q ss_pred CeeeccCCCCCCcCceeecc-C-Cceechhchhhc
Q 038068 53 DIFDCPICFEPLTVPVFQCV-N-GHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~-c-gH~fC~~C~~~~ 85 (269)
+.--|-||.+- .++.|. | |-+||..|+...
T Consensus 7 e~pWC~ICneD---AtlrC~gCdgDLYC~rC~rE~ 38 (67)
T 2d8v_A 7 GLPWCCICNED---ATLRCAGCDGDLYCARCFREG 38 (67)
T ss_dssp CCSSCTTTCSC---CCEEETTTTSEEECSSHHHHH
T ss_pred CCCeeEEeCCC---CeEEecCCCCceehHHHHHHH
Confidence 44568899885 445564 7 899999999876
No 215
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=37.29 E-value=43 Score=19.68 Aligned_cols=45 Identities=22% Similarity=0.437 Sum_probs=28.0
Q ss_pred cccccc-ccchhhhhcc-CCCeeeeCCCCCCCCcc-ChhHHhhhhhhhCC
Q 038068 122 CQQKMS-FSKKRGHEKT-CQHSPLPCPLSDCSFLG-CSSQFVRHFMAKHN 168 (269)
Q Consensus 122 C~~~~~-~~~~~~He~~-C~~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~ 168 (269)
|...+. ...|..|+.. -.-.|+.|+. |+... ....|..|+...|.
T Consensus 7 C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~ 54 (57)
T 1bbo_A 7 CGIRXKKPSMLKKHIRTHTDVRPYHCTY--CNFSFKTKGNLTKHMKSKAH 54 (57)
T ss_dssp TCCBCSSHHHHHHHHHHTSSCCCEECSS--SSCEESSHHHHHHHHHSSSS
T ss_pred CcCcCCCHHHHHHHHHhcCCCCCccCCC--CCchhcCHHHHHHHHHHhcc
Confidence 544443 2455666553 2345788884 88764 45789999876554
No 216
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=36.99 E-value=12 Score=24.95 Aligned_cols=28 Identities=21% Similarity=0.253 Sum_probs=19.6
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchh
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCA 83 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~ 83 (269)
+.|.||+|...|.- .-..|-.+|..|-.
T Consensus 7 ~iL~CP~ck~~L~~---~~~~~~LiC~~cg~ 34 (68)
T 2jr6_A 7 DILVCPVTKGRLEY---HQDKQELWSRQAKL 34 (68)
T ss_dssp CCCBCSSSCCBCEE---ETTTTEEEETTTTE
T ss_pred hheECCCCCCcCeE---eCCCCEEEcCCCCc
Confidence 78999999987753 22457777766643
No 217
>1flk_A TNF receptor associated factor 3; TNF signaling, TRAF3, CD40-binding protein, apoptosis; 2.80A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1fll_A
Probab=36.96 E-value=9 Score=31.60 Aligned_cols=25 Identities=0% Similarity=-0.064 Sum_probs=7.7
Q ss_pred eecccCCCCCccccc-----cccchhhhhc
Q 038068 112 QVNCKNAEYGCQQKM-----SFSKKRGHEK 136 (269)
Q Consensus 112 ~v~C~~~~~GC~~~~-----~~~~~~~He~ 136 (269)
.+.||+...||+..+ +...+++|.+
T Consensus 9 ~i~c~~~~~gc~~~~~~~~~~r~~~~~h~~ 38 (228)
T 1flk_A 9 SMKSSVESLQNRVTELESVDKSAGQVARNT 38 (228)
T ss_dssp ---------------CTTTTTTTTTHHHHH
T ss_pred heeccccccCceeeccccccchhHHHHHHH
Confidence 568999999999988 7788888864
No 218
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=36.79 E-value=14 Score=23.73 Aligned_cols=31 Identities=23% Similarity=0.520 Sum_probs=15.6
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchh
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCA 83 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~ 83 (269)
+=+.|..|..+|..-.+.-.-|..+|..|..
T Consensus 38 ~CF~C~~C~~~L~~~~~~~~~g~~yC~~~y~ 68 (72)
T 3f6q_B 38 QCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQ 68 (72)
T ss_dssp TTSSCTTTCCCCGGGCCEEETTEEECHHHHH
T ss_pred CCCcccCCCCCCCCCCeEeECCeEeCHHHHH
Confidence 3455666666554432222345566665554
No 219
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=36.65 E-value=19 Score=28.29 Aligned_cols=13 Identities=31% Similarity=0.910 Sum_probs=8.7
Q ss_pred cCCCCCCCCCCCc
Q 038068 85 IKRNCPTCSSPTV 97 (269)
Q Consensus 85 ~~~~Cp~C~~~~~ 97 (269)
....||.|..+-.
T Consensus 152 ~p~~CP~Cg~~~~ 164 (170)
T 3pwf_A 152 APEYCPVCGAPKE 164 (170)
T ss_dssp CCSBCTTTCCBGG
T ss_pred CCCCCCCCCCCHH
Confidence 3457999986543
No 220
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=36.54 E-value=28 Score=18.56 Aligned_cols=26 Identities=15% Similarity=0.300 Sum_probs=18.9
Q ss_pred eeeeCCCCCCCCccC-hhHHhhhhhhh
Q 038068 141 SPLPCPLSDCSFLGC-SSQFVRHFMAK 166 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g~-~~~l~~Hl~~~ 166 (269)
+|+.|+.+.|+.... ...|..|....
T Consensus 5 k~~~C~~~~C~k~f~~~~~L~~H~~~H 31 (38)
T 1bhi_A 5 KPFLCTAPGCGQRFTNEDHLAVHKHKH 31 (38)
T ss_dssp CCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred cceECCCCCCCcccCCHHHHHHHHHHh
Confidence 567888667987654 56899998653
No 221
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.48 E-value=9.1 Score=26.49 Aligned_cols=57 Identities=23% Similarity=0.385 Sum_probs=37.4
Q ss_pred hcceecccCCCCCcccccc--ccchhhhhccCC--CeeeeCCCCCCCCccC-hhHHhhhhhhhCCCCc
Q 038068 109 ELVQVNCKNAEYGCQQKMS--FSKKRGHEKTCQ--HSPLPCPLSDCSFLGC-SSQFVRHFMAKHNISA 171 (269)
Q Consensus 109 ~~l~v~C~~~~~GC~~~~~--~~~~~~He~~C~--~~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H~~~~ 171 (269)
..-.+.|+. |...+. ...|..|++... -.++.|+. |+.... ...|..|++..|....
T Consensus 21 ~~~~~~C~~----C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~--C~k~F~~~~~L~~H~~~h~~~kp 82 (98)
T 2gqj_A 21 ERGEAVCPT----CNVVTRKTLVGLKKHMEVCQKLQDALKCQH--CRKQFKSKAGLNYHTMAEHSAKP 82 (98)
T ss_dssp TTSCCCCTT----TCCCCSSCSHHHHHHHHHHHHHHHHHSCSS--SCCCCSCHHHHHHHHHHHSCSCS
T ss_pred cCCCcCCCC----CCCChhhhHHHHHHHHHHHcCCCCCEECCC--CCCccCCHHHHHHHHHHHcCCCC
Confidence 344566763 666554 346667765432 35788885 887654 5689999998886543
No 222
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=36.32 E-value=28 Score=16.89 Aligned_cols=24 Identities=17% Similarity=0.217 Sum_probs=16.1
Q ss_pred eeeCCCCCCCCcc-ChhHHhhhhhh
Q 038068 142 PLPCPLSDCSFLG-CSSQFVRHFMA 165 (269)
Q Consensus 142 p~~Cp~~~C~~~g-~~~~l~~Hl~~ 165 (269)
|+.|+.+.|+... ....|..|.+.
T Consensus 2 ~~~C~~~~C~k~f~~~~~l~~H~~~ 26 (29)
T 2ab3_A 2 VYVCHFENCGRSFNDRRKLNRHKKI 26 (29)
T ss_dssp CEEECSTTTCEEESSHHHHHHHHGG
T ss_pred CCCCcCCcCcCccCCHHHHHHHHHH
Confidence 4667755688664 45678888754
No 223
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=35.99 E-value=17 Score=23.04 Aligned_cols=51 Identities=18% Similarity=0.390 Sum_probs=31.1
Q ss_pred ceecccCCCCCccccccc-cchhhhhcc-CCCeeeeCCCCCCCCccC-hhHHhhhhhh
Q 038068 111 VQVNCKNAEYGCQQKMSF-SKKRGHEKT-CQHSPLPCPLSDCSFLGC-SSQFVRHFMA 165 (269)
Q Consensus 111 l~v~C~~~~~GC~~~~~~-~~~~~He~~-C~~~p~~Cp~~~C~~~g~-~~~l~~Hl~~ 165 (269)
-++.|+.. +|...+.. ..|..|++. -.-.++.|+. |+.... ...|..|.+.
T Consensus 18 ~~~~C~~~--~C~k~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~ 71 (73)
T 1f2i_G 18 RPYACPVE--SCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRT 71 (73)
T ss_dssp CCEECSST--TBCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHTT
T ss_pred CccCCcCC--CCCCccCCHHHHHHHHHhhCCCCCeECCC--CCchhCCHHHHHHHHHh
Confidence 34667642 57766554 466677653 3345778884 876643 5678888653
No 224
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.91 E-value=28 Score=19.65 Aligned_cols=29 Identities=14% Similarity=0.233 Sum_probs=19.6
Q ss_pred CeeeeCCCCCCCCcc-ChhHHhhhhhhhCCCC
Q 038068 140 HSPLPCPLSDCSFLG-CSSQFVRHFMAKHNIS 170 (269)
Q Consensus 140 ~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~ 170 (269)
-+|+.|+. |+... ....|..|+...+...
T Consensus 10 ~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2ytg_A 10 EKPFKCGE--CGKSYNQRVHLTQHQRVHTGEK 39 (46)
T ss_dssp CCSEECTT--TCCEESSSHHHHTTGGGGSSCC
T ss_pred CCCeECCC--CCcccCCHHHHHHHHHHcCCCC
Confidence 35788884 88664 4578999987654443
No 225
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=35.81 E-value=42 Score=21.65 Aligned_cols=57 Identities=16% Similarity=0.207 Sum_probs=35.8
Q ss_pred ceecccCCCCCccccccc-cchhhhhcc-CCC----eeeeCCCCCCCCcc-ChhHHhhhhhhhCCCCccc
Q 038068 111 VQVNCKNAEYGCQQKMSF-SKKRGHEKT-CQH----SPLPCPLSDCSFLG-CSSQFVRHFMAKHNISAVP 173 (269)
Q Consensus 111 l~v~C~~~~~GC~~~~~~-~~~~~He~~-C~~----~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~~~~ 173 (269)
-++.|+. |...+.. ..|..|+.. -.- .++.|+. |+... ....|..|+...|......
T Consensus 14 k~~~C~~----C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~ 77 (86)
T 1x6h_A 14 KPYACSH----CDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSK--CGKTFTRRNTMARHADNCAGPDGVE 77 (86)
T ss_dssp CCEECSS----SSCEESSHHHHHHHHHHTTCSSCCCCCEECSS--SCCEESCHHHHHHHHHHCCCCCSCC
T ss_pred CCCcCCC----CCCccCCHHHHHHHHHHhcCCcCCCcceECCC--CCChhCCHHHHHHHHHHccCCCCcc
Confidence 3455653 6655543 456677542 222 5788984 88765 4678999998877765543
No 226
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=35.42 E-value=24 Score=24.01 Aligned_cols=33 Identities=24% Similarity=0.399 Sum_probs=17.2
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhc
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~ 85 (269)
+=|.|..|...|..--+.-.-|..+|..|..+.
T Consensus 50 ~CF~C~~C~~~L~~~~~~~~~g~~yC~~~y~~~ 82 (89)
T 1x64_A 50 ECFVCADCNLNLKQKGYFFVEGELYCETHARAR 82 (89)
T ss_dssp TTCCCSSSCCCTTTSCCEEETTEEECHHHHHHH
T ss_pred cCCEecCCCCCCCCCCeEeECCEEECHHHHHHH
Confidence 345566666666542112245666666665543
No 227
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.99 E-value=29 Score=19.49 Aligned_cols=28 Identities=18% Similarity=0.210 Sum_probs=19.1
Q ss_pred eeeeCCCCCCCCccC-hhHHhhhhhhhCCCC
Q 038068 141 SPLPCPLSDCSFLGC-SSQFVRHFMAKHNIS 170 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H~~~ 170 (269)
+|+.|+. |+.... ...|..|....+...
T Consensus 11 ~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2eov_A 11 KPYKCSD--CGKSFTWKSRLRIHQKCHTGER 39 (46)
T ss_dssp CSCBCSS--SCCBCSSHHHHHHHHHHHSCCS
T ss_pred CCccCCc--cChhhCCHHHHHHHHHhcCCCC
Confidence 5678884 886644 578999987655443
No 228
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=34.79 E-value=45 Score=21.06 Aligned_cols=45 Identities=16% Similarity=0.378 Sum_probs=28.2
Q ss_pred ccccccc-cchhhhhcc-CCCeeeeCCCCCCCCcc-ChhHHhhhhhhhCC
Q 038068 122 CQQKMSF-SKKRGHEKT-CQHSPLPCPLSDCSFLG-CSSQFVRHFMAKHN 168 (269)
Q Consensus 122 C~~~~~~-~~~~~He~~-C~~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~ 168 (269)
|...+.. ..|..|++. -.-.++.|+. |+... ....|..|.+..+.
T Consensus 23 C~k~f~~~~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~ 70 (74)
T 2lce_A 23 CQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSG 70 (74)
T ss_dssp SSCCBSCHHHHHHHHHHHCCCCSEECTT--TCCEESCHHHHHHHHHHHCC
T ss_pred CCceeCCHHHHHHHHHHcCCCCCEECCC--CCchhCCHHHHHHHHHhcCC
Confidence 5555443 455666543 2346788984 88765 45689999876543
No 229
>1j2o_A FLIN2, fusion of rhombotin-2 and LIM domain-binding protein 1; LIM-interaction-domain (LID), metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=34.64 E-value=23 Score=25.45 Aligned_cols=40 Identities=18% Similarity=0.293 Sum_probs=29.1
Q ss_pred CeeeccCCCCCCcC---ceeeccCCceechhchhhc-CCCCCCCC
Q 038068 53 DIFDCPICFEPLTV---PVFQCVNGHLACSDCCAKI-KRNCPTCS 93 (269)
Q Consensus 53 ~~l~C~iC~~~l~~---Pv~~c~cgH~fC~~C~~~~-~~~Cp~C~ 93 (269)
+=|.|..|..+|.. +.+ -.-|..+|..|..+. ...|-.|.
T Consensus 29 ~CF~C~~C~~~L~~~g~~~~-~~~g~~yC~~~y~~~f~~~c~~c~ 72 (114)
T 1j2o_A 29 DCLSCDLCGCRLGEVGRRLY-YKLGRKLCRRDYLRLGGSGGHMGS 72 (114)
T ss_dssp TTCCCSSSCSCCCCSSSCCC-CBTTBCCCHHHHHHHHTSCCSSCB
T ss_pred hcCcccccCCchhcCCCeeE-EECCeeechHHHHHHhCcccCcCC
Confidence 56889999998864 443 467889999998776 55665553
No 230
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.58 E-value=31 Score=19.41 Aligned_cols=28 Identities=25% Similarity=0.418 Sum_probs=18.9
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNIS 170 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~ 170 (269)
.|+.|+. |+... ....|..|....+...
T Consensus 11 ~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2eoq_A 11 KPFKCDI--CGKSFCGRSRLNRHSMVHTAEK 39 (46)
T ss_dssp CSCCCSS--SCCCCSSHHHHHHHHHHTTCCC
T ss_pred CCcCCCc--CCchhCCHHHHHHHHHHcCCCC
Confidence 4678884 88664 4578999977644443
No 231
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.35 E-value=32 Score=19.41 Aligned_cols=28 Identities=14% Similarity=0.086 Sum_probs=19.1
Q ss_pred CeeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 140 HSPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 140 ~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
-.|+.|+. |+... ....|..|....+..
T Consensus 10 ~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~ 38 (46)
T 2em5_A 10 TKSHQCHE--CGRGFTLKSHLNQHQRIHTGE 38 (46)
T ss_dssp SCSEECSS--SCCEESSHHHHHHHHTTTSCS
T ss_pred CCCeECCc--CCCccCCHHHHHHHHHHhCCC
Confidence 35788884 88764 457899998664433
No 232
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.34 E-value=31 Score=19.41 Aligned_cols=27 Identities=19% Similarity=0.268 Sum_probs=18.2
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
+|+.|+. |+... ....|..|....+..
T Consensus 11 ~~~~C~~--C~k~f~~~~~L~~H~~~H~~~ 38 (46)
T 2ep0_A 11 KPYKCDV--CHKSFRYGSSLTVHQRIHTGE 38 (46)
T ss_dssp CSEECSS--SCCEESSHHHHHHHHTTTSSS
T ss_pred CCeeCcc--cCcccCChHHHHHHHHHhCCC
Confidence 5678874 88664 456899997754433
No 233
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=32.17 E-value=34 Score=18.26 Aligned_cols=25 Identities=16% Similarity=0.262 Sum_probs=18.1
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhh
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMA 165 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~ 165 (269)
.|+.|+++.|+... ....|..|...
T Consensus 7 k~~~C~~~~C~k~f~~~~~L~~H~~~ 32 (37)
T 1va1_A 7 KQHICHIQGCGKVYGKTSHLRAHLRW 32 (37)
T ss_dssp CCEECCSTTCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCccCCHHHHHHHHHh
Confidence 46788766798764 45688999764
No 234
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=32.05 E-value=23 Score=23.36 Aligned_cols=28 Identities=18% Similarity=0.198 Sum_probs=19.1
Q ss_pred CCeeeccCCCCCCcCceeeccCCceechhch
Q 038068 52 QDIFDCPICFEPLTVPVFQCVNGHLACSDCC 82 (269)
Q Consensus 52 ~~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~ 82 (269)
.+.|.||+|...|.-- -.-|..+|..|.
T Consensus 8 LeiL~CP~ck~~L~~~---~~~g~LvC~~c~ 35 (67)
T 2jny_A 8 LEVLACPKDKGPLRYL---ESEQLLVNERLN 35 (67)
T ss_dssp TCCCBCTTTCCBCEEE---TTTTEEEETTTT
T ss_pred HHHhCCCCCCCcCeEe---CCCCEEEcCCCC
Confidence 3789999999976532 134667776664
No 235
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.01 E-value=35 Score=19.16 Aligned_cols=28 Identities=18% Similarity=0.255 Sum_probs=19.4
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNIS 170 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~ 170 (269)
.|+.|+. |+... ....|..|........
T Consensus 11 k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k 39 (46)
T 2emy_A 11 NPYECHE--CGKAFSRKYQLISHQRTHAGEK 39 (46)
T ss_dssp CCEECSS--SCCEESSHHHHHHHHHHHTTSC
T ss_pred cCcCCCC--CCcccCcHHHHHHHHHHcCCCC
Confidence 5788884 88764 4578999987654443
No 236
>2l3k_A Rhombotin-2, linker, LIM domain-binding protein 1; LMO2(LIM2)-LDB1(LID), chimera, fusion protein, oncoprotein; NMR {Mus musculus} PDB: 2l6y_B 2l6z_C
Probab=31.83 E-value=27 Score=25.49 Aligned_cols=42 Identities=19% Similarity=0.381 Sum_probs=29.1
Q ss_pred CeeeccCCCCCCc-CceeeccCCceechhchhhc-CCCCCCCCC
Q 038068 53 DIFDCPICFEPLT-VPVFQCVNGHLACSDCCAKI-KRNCPTCSS 94 (269)
Q Consensus 53 ~~l~C~iC~~~l~-~Pv~~c~cgH~fC~~C~~~~-~~~Cp~C~~ 94 (269)
+=|.|..|...|. ..-+.-.-|..+|..|..++ ...|..+..
T Consensus 35 ~CF~C~~C~~~L~~g~~f~~~~g~~yC~~cy~~~~~~~~~~~~~ 78 (123)
T 2l3k_A 35 ECFKCAACQKHFSVGDRYLLINSDIVCEQDIYEWTKINGGSGGS 78 (123)
T ss_dssp TTCBCTTTCCBCCTTCEEEECSSSEEEGGGHHHHHHHHTCCCCC
T ss_pred ccCccccCCCCCCCCCcEEeeCCEEEcHHHhHHHhccccCCCCC
Confidence 5688999999984 32233367899999998876 345655544
No 237
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=31.78 E-value=40 Score=18.95 Aligned_cols=27 Identities=15% Similarity=0.218 Sum_probs=18.4
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
+|+.|+. |+... ....|..|.......
T Consensus 11 k~~~C~~--C~k~f~~~~~L~~H~~~H~~~ 38 (46)
T 2el6_A 11 NPYKCSQ--CEKSFSGKLRLLVHQRMHTRE 38 (46)
T ss_dssp CSEECSS--SSCEESSHHHHHHHHGGGCCS
T ss_pred CCeECCC--CCcccCCHHHHHHHHHHcCCC
Confidence 5678884 88664 457899997764433
No 238
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.40 E-value=40 Score=20.72 Aligned_cols=28 Identities=14% Similarity=0.125 Sum_probs=21.9
Q ss_pred eeeCCCCCCCCccC-hhHHhhhhhhhCCCCc
Q 038068 142 PLPCPLSDCSFLGC-SSQFVRHFMAKHNISA 171 (269)
Q Consensus 142 p~~Cp~~~C~~~g~-~~~l~~Hl~~~H~~~~ 171 (269)
...|| .|+.... ...|..|....+.+.+
T Consensus 12 ~~~CP--rCn~~f~~~~sLr~HmkycCp~~v 40 (49)
T 2e72_A 12 RKICP--RCNAQFRVTEALRGHMCYCCPEMV 40 (49)
T ss_dssp CCCCT--TTCCCCSSHHHHHHHHHHHCTTTC
T ss_pred ceeCC--cccccccchHHHHhhhhhcCcchh
Confidence 45788 6998766 5789999999887754
No 239
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.31 E-value=29 Score=19.49 Aligned_cols=27 Identities=22% Similarity=0.317 Sum_probs=17.9
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
+|+.|+. |+... ....|..|....+..
T Consensus 11 k~~~C~~--C~k~f~~~~~L~~H~~~H~~~ 38 (46)
T 2ytr_A 11 KPYKCNE--CGKAFSQTSKLARHQRIHTGE 38 (46)
T ss_dssp CTTCCTT--TCCCCSSHHHHHHHHTTTTTC
T ss_pred cCcCCCC--CCCccCCHHHHHHHHHhcCCC
Confidence 4567874 88664 456899997764433
No 240
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.25 E-value=37 Score=19.07 Aligned_cols=26 Identities=23% Similarity=0.298 Sum_probs=18.1
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHN 168 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~ 168 (269)
+|+.|+. |+... ....|..|......
T Consensus 11 k~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2enc_A 11 KPFKCEE--CGKGFYTNSQCYSHQRSHSG 37 (46)
T ss_dssp CSEECSS--SCCEESSHHHHHHHHHHSCC
T ss_pred CCcCCCC--CCCcCCChHHHHHHHHHhCC
Confidence 5678884 88664 45789999875433
No 241
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=31.24 E-value=22 Score=22.78 Aligned_cols=20 Identities=20% Similarity=0.223 Sum_probs=13.6
Q ss_pred CeeeccCCCCCCc--Cceeecc
Q 038068 53 DIFDCPICFEPLT--VPVFQCV 72 (269)
Q Consensus 53 ~~l~C~iC~~~l~--~Pv~~c~ 72 (269)
+...|++|..+.. ..+++|.
T Consensus 5 e~~~C~~C~~~~~~~~~mI~Cd 26 (64)
T 1we9_A 5 SSGQCGACGESYAADEFWICCD 26 (64)
T ss_dssp SCCCCSSSCCCCCSSSCEEECS
T ss_pred CCCCCCCCCCccCCCCCEEEcc
Confidence 5678999998763 3455554
No 242
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.22 E-value=31 Score=19.41 Aligned_cols=30 Identities=17% Similarity=0.159 Sum_probs=20.2
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCCCcc
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNISAV 172 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~~~ 172 (269)
+|+.|+. |+... ....|..|....+.....
T Consensus 11 ~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~ 41 (46)
T 2en6_A 11 KPYGCNE--CGKTFSQKSILSAHQRTHTGEKPS 41 (46)
T ss_dssp CCEEETT--TTEEESSHHHHHHHHHHHSSCCCS
T ss_pred cCeECCC--CCcccCchHHHHHHHHHcCCCCCC
Confidence 5678884 88664 456899998775544433
No 243
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.99 E-value=35 Score=19.14 Aligned_cols=27 Identities=11% Similarity=0.089 Sum_probs=18.5
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
.|+.|+. |+... ....|..|....+..
T Consensus 11 k~~~C~~--C~k~f~~~~~L~~H~~~H~~~ 38 (46)
T 2eq4_A 11 KLYNCKE--CGKSFSRAPCLLKHERLHSGE 38 (46)
T ss_dssp CCCCBTT--TTBCCSCHHHHHHHHHHCCSS
T ss_pred CCeECCC--CCCccCchHHHHHHHHhcCCC
Confidence 5678884 88664 456899998764433
No 244
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.75 E-value=39 Score=18.95 Aligned_cols=28 Identities=14% Similarity=0.155 Sum_probs=19.0
Q ss_pred eeeeCCCCCCCCccC-hhHHhhhhhhhCCCC
Q 038068 141 SPLPCPLSDCSFLGC-SSQFVRHFMAKHNIS 170 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H~~~ 170 (269)
+|+.|+. |+.... ...|..|....+...
T Consensus 11 k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2epz_A 11 KPFDCID--CGKAFSDHIGLNQHRRIHTGEK 39 (46)
T ss_dssp CSBCCTT--TCCCBSSHHHHHHHHTTTTTCC
T ss_pred CCeECCC--CCceeCCHHHHHHHHHHhCCCC
Confidence 5678884 887644 568999987644443
No 245
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=30.59 E-value=36 Score=19.05 Aligned_cols=27 Identities=19% Similarity=0.279 Sum_probs=18.7
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
+|+.|+. |+... ....|..|....+..
T Consensus 11 k~~~C~~--C~k~f~~~~~L~~H~~~H~~~ 38 (46)
T 2em9_A 11 KPYNCKE--CGKSFRWASCLLKHQRVHSGE 38 (46)
T ss_dssp CSEECSS--SCCEESSHHHHHHHGGGGTSC
T ss_pred cCeECCc--cccccCChHHHHHHHHHhCCC
Confidence 5788884 88664 457899998764433
No 246
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.56 E-value=42 Score=18.80 Aligned_cols=28 Identities=14% Similarity=0.248 Sum_probs=19.3
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNIS 170 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~ 170 (269)
.|+.|+. |+... ....|..|+...+...
T Consensus 11 k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2eml_A 11 KPYECSV--CGKAFSHRQSLSVHQRIHSGKK 39 (46)
T ss_dssp CSEECSS--SCCEESSHHHHHHHHGGGSSCC
T ss_pred CCeeCCC--cCCccCCHHHHHHHHHHhcCCC
Confidence 5678884 88664 4568999987654443
No 247
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.53 E-value=39 Score=18.97 Aligned_cols=29 Identities=14% Similarity=0.225 Sum_probs=19.6
Q ss_pred CeeeeCCCCCCCCcc-ChhHHhhhhhhhCCCC
Q 038068 140 HSPLPCPLSDCSFLG-CSSQFVRHFMAKHNIS 170 (269)
Q Consensus 140 ~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~ 170 (269)
-+|+.|+. |+... ....|..|........
T Consensus 10 ~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2ytd_A 10 EKPYKCSE--CGKAFHRHTHLNEHRRIHTGYR 39 (46)
T ss_dssp CCSEECSS--SCCEESSHHHHHHHHHHHTCCC
T ss_pred CcCeECCC--CCCeeCChHHHHHHHHHcCCCC
Confidence 35778884 88664 4568999987654443
No 248
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=30.41 E-value=68 Score=24.44 Aligned_cols=43 Identities=21% Similarity=0.385 Sum_probs=30.2
Q ss_pred CCCeeeccCCCCCCcCceeecc-CCceechhchhhc--------------CCCCCCCCCC
Q 038068 51 DQDIFDCPICFEPLTVPVFQCV-NGHLACSDCCAKI--------------KRNCPTCSSP 95 (269)
Q Consensus 51 ~~~~l~C~iC~~~l~~Pv~~c~-cgH~fC~~C~~~~--------------~~~Cp~C~~~ 95 (269)
+...-.|.+|.+-= . ++.|. |-..||..|+.+. ...|+.|...
T Consensus 60 Dg~~d~C~vC~~GG-~-LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 60 DGMDEQCRWCAEGG-N-LICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPE 117 (142)
T ss_dssp TSCBCSCSSSCCCS-S-EEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCC
T ss_pred CCCCCeecccCCCC-c-EEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCc
Confidence 33567899998833 2 44564 8999999999831 3469999754
No 249
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.37 E-value=45 Score=18.66 Aligned_cols=28 Identities=21% Similarity=0.389 Sum_probs=19.0
Q ss_pred CeeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 140 HSPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 140 ~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
-.|+.|+. |+... ....|..|+......
T Consensus 10 ~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~ 38 (46)
T 2eq0_A 10 EKPYKCHE--CGKVFRRNSHLARHQLIHTGE 38 (46)
T ss_dssp CCCEECTT--TCCEESSHHHHHHHHTTTCCC
T ss_pred CCCeECCC--CCchhCCHHHHHHHHHHcCCC
Confidence 35788884 88664 457899997764433
No 250
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.32 E-value=44 Score=18.46 Aligned_cols=28 Identities=18% Similarity=0.288 Sum_probs=19.2
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNIS 170 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~ 170 (269)
+|+.|+. |+... ....|..|....+...
T Consensus 9 k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~ 37 (44)
T 2emx_A 9 KPFGCSC--CEKAFSSKSYLLVHQQTHAEEK 37 (44)
T ss_dssp CCEECSS--SSCEESSHHHHHHHHHHHTSSC
T ss_pred cCccCCC--CCcccCCHHHHHHHHHHhCCCC
Confidence 4678884 88664 4578999987655443
No 251
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.10 E-value=41 Score=18.89 Aligned_cols=27 Identities=19% Similarity=0.197 Sum_probs=18.2
Q ss_pred eeeeCCCCCCCCccC-hhHHhhhhhhhCCC
Q 038068 141 SPLPCPLSDCSFLGC-SSQFVRHFMAKHNI 169 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H~~ 169 (269)
+|+.|+ .|+.... ...|..|....+..
T Consensus 11 k~~~C~--~C~k~F~~~~~L~~H~~~H~~~ 38 (46)
T 2elz_A 11 KPYKCE--DCGKGYNRRLNLDMHQRVHMGE 38 (46)
T ss_dssp SSCBCS--SSCCBCSSHHHHHHHGGGGGSC
T ss_pred CCeeCc--ccCchhCCHHHHHHHHHhcCCC
Confidence 467787 4886644 56899998754443
No 252
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=28.93 E-value=44 Score=18.78 Aligned_cols=29 Identities=14% Similarity=0.301 Sum_probs=19.4
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCCCc
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNISA 171 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~~ 171 (269)
.|+.|+. |+... ....|..|+........
T Consensus 11 k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~ 40 (46)
T 2emk_A 11 KPYECKE--CGKAFSQTTHLIQHQRVHTGEKP 40 (46)
T ss_dssp CSCBCSS--SCCBCSCHHHHHHHHHHHSSCCC
T ss_pred CceECCC--CCchhCCHHHHHHHHHHcCCCCC
Confidence 4677884 88664 45689999876554433
No 253
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.92 E-value=49 Score=18.47 Aligned_cols=29 Identities=21% Similarity=0.300 Sum_probs=19.1
Q ss_pred CeeeeCCCCCCCCcc-ChhHHhhhhhhhCCCC
Q 038068 140 HSPLPCPLSDCSFLG-CSSQFVRHFMAKHNIS 170 (269)
Q Consensus 140 ~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~ 170 (269)
-.|+.|+. |+... ....|..|....+...
T Consensus 10 ~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k 39 (46)
T 2ytn_A 10 KKPYKCNE--CGKVFTQNSHLARHRGIHTGEK 39 (46)
T ss_dssp CSSCBCTT--TCCBCSSHHHHHHHGGGTSCCC
T ss_pred CcCeECCC--CCCeeCCHHHHHHHhhhcCCCC
Confidence 35678884 88664 4568999977644433
No 254
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.86 E-value=50 Score=17.86 Aligned_cols=25 Identities=12% Similarity=0.146 Sum_probs=17.5
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKH 167 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H 167 (269)
.|+.|+ .|+... ....|..|....+
T Consensus 9 k~~~C~--~C~k~f~~~~~L~~H~~~H~ 34 (41)
T 2ept_A 9 RVYECQ--ECGKSFRQKGSLTLHERIHT 34 (41)
T ss_dssp CCEECS--SSCCEESSHHHHHHHGGGCC
T ss_pred CCeECC--CCCCCcCCHHHHHHHHHHhC
Confidence 567888 488764 4568999976543
No 255
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.78 E-value=45 Score=18.67 Aligned_cols=26 Identities=23% Similarity=0.354 Sum_probs=18.2
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHN 168 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~ 168 (269)
.|+.|+. |+... ....|..|....+.
T Consensus 11 k~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2ene_A 11 KPYKCNE--CGKVFRHNSYLSRHQRIHTG 37 (46)
T ss_dssp SSEECSS--SCCEESSHHHHHHHHTTTCC
T ss_pred CCeECCC--CCchhCChHHHHHHHhhcCC
Confidence 5678884 88664 45789999876443
No 256
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=28.70 E-value=43 Score=18.75 Aligned_cols=27 Identities=15% Similarity=0.194 Sum_probs=18.3
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
.|+.|+ .|+... ....|..|.......
T Consensus 11 k~~~C~--~C~k~F~~~~~L~~H~~~H~~~ 38 (46)
T 2em0_A 11 KTWKCR--ECDMCFSQASSLRLHQNVHVGE 38 (46)
T ss_dssp CCCCCS--SSCCCCSSHHHHHHHGGGGSSS
T ss_pred cCeECC--CCCcccCCHHHHHHHHHHcCCC
Confidence 567787 488664 456899998764433
No 257
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.57 E-value=43 Score=18.69 Aligned_cols=27 Identities=22% Similarity=0.289 Sum_probs=18.6
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
.|+.|+. |+... ....|..|....+..
T Consensus 11 k~~~C~~--C~k~F~~~~~L~~H~~~H~~~ 38 (46)
T 2epw_A 11 KPCKCTE--CGKAFCWKSQLIMHQRTHVDD 38 (46)
T ss_dssp CSEECSS--SCCEESSSHHHHHHHHHCCSC
T ss_pred CCeeCCC--CCCccCCHHHHHHHHHHhCCC
Confidence 5678884 88664 457899998764433
No 258
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.43 E-value=44 Score=18.66 Aligned_cols=28 Identities=14% Similarity=0.110 Sum_probs=18.7
Q ss_pred CeeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 140 HSPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 140 ~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
-+|+.|+ .|+... ....|..|.......
T Consensus 10 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~ 38 (46)
T 2en8_A 10 EKSHTCD--ECGKNFCYISALRIHQRVHMGE 38 (46)
T ss_dssp CSSEECT--TTCCEESSHHHHHHHHTTTCCS
T ss_pred CCCeECC--CcCcccCCHHHHHHHHHHhCCC
Confidence 3567888 488664 456899998654433
No 259
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.43 E-value=44 Score=18.64 Aligned_cols=29 Identities=17% Similarity=0.255 Sum_probs=19.9
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCCCc
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNISA 171 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~~ 171 (269)
.|+.|+. |+... ....|..|+........
T Consensus 11 k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~ 40 (46)
T 2emm_A 11 RPHKCNE--CGKSFIQSAHLIQHQRIHTGEKP 40 (46)
T ss_dssp CSEECSS--SCCEESSHHHHHHHHHHHSCCCT
T ss_pred CCeeCCC--CChhhCCHHHHHHHHHHhCCCCC
Confidence 5788884 88764 45789999876554433
No 260
>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2
Probab=28.37 E-value=20 Score=24.55 Aligned_cols=40 Identities=20% Similarity=0.433 Sum_probs=30.4
Q ss_pred CccccccccchhhhhccCCCe-eeeCCCCCCCCccChhHHhhh
Q 038068 121 GCQQKMSFSKKRGHEKTCQHS-PLPCPLSDCSFLGCSSQFVRH 162 (269)
Q Consensus 121 GC~~~~~~~~~~~He~~C~~~-p~~Cp~~~C~~~g~~~~l~~H 162 (269)
+|...+.-.+++.|...|.-. .+.|- .|+......+...|
T Consensus 15 ~Cgd~lKK~kv~~H~~~Cr~~~~~SCI--DC~~~F~~~~y~~H 55 (79)
T 1wjv_A 15 ACGESVKKIQVEKHVSNCRNCECLSCI--DCGKDFWGDDYKSH 55 (79)
T ss_dssp SSCCEEETTHHHHHHHHCTTCCEEEET--TTTEEEEGGGTTTC
T ss_pred CCCCeeecccchhHHhhCCCCCcEEec--ccCCeeCCCCEeCE
Confidence 688888888888888888864 77887 68866656666666
No 261
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=28.22 E-value=45 Score=18.72 Aligned_cols=29 Identities=17% Similarity=0.164 Sum_probs=19.5
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCCCc
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNISA 171 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~~ 171 (269)
+|+.|+. |+... ....|..|....+....
T Consensus 11 k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~ 40 (46)
T 2ely_A 11 KPFKCVE--CGKGFSRRSALNVHHKLHTGEKP 40 (46)
T ss_dssp CSBCCSS--SCCCBSSTTHHHHHHHHHSCCSS
T ss_pred CCcccCc--cCcccCCHHHHHHHHHHcCCCCC
Confidence 5678884 88664 45789999876554433
No 262
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.16 E-value=46 Score=18.58 Aligned_cols=27 Identities=22% Similarity=0.266 Sum_probs=18.3
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
+|+.|+. |+... ....|..|....+..
T Consensus 11 ~~~~C~~--C~k~f~~~~~L~~H~~~H~~~ 38 (46)
T 2eop_A 11 KPHECRE--CGKSFSFNSQLIVHQRIHTGE 38 (46)
T ss_dssp CSCBCTT--TCCBCSSHHHHHHHHTTTTTS
T ss_pred CCeeCCC--CCchhCCHHHHHHHHHHcCCC
Confidence 5678884 88664 457899998764433
No 263
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.06 E-value=52 Score=20.87 Aligned_cols=27 Identities=37% Similarity=0.753 Sum_probs=20.7
Q ss_pred eccCCCCCCcCceeecc-CCceech-hchhhc
Q 038068 56 DCPICFEPLTVPVFQCV-NGHLACS-DCCAKI 85 (269)
Q Consensus 56 ~C~iC~~~l~~Pv~~c~-cgH~fC~-~C~~~~ 85 (269)
.|.||.. .+.|.|+ |+-.+|+ .|....
T Consensus 14 ~C~vC~~---~~kY~CPrC~~~yCSl~C~k~H 42 (56)
T 2yqq_A 14 VCVICLE---KPKYRCPACRVPYCSVVCFRKH 42 (56)
T ss_dssp CCTTTCS---CCSEECTTTCCEESSHHHHHHH
T ss_pred ccCcCcC---CCeeeCCCCCCCeeCHHHHHHH
Confidence 6999988 4456776 9999998 677655
No 264
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.00 E-value=42 Score=18.78 Aligned_cols=28 Identities=11% Similarity=0.186 Sum_probs=19.2
Q ss_pred eeeeCCCCCCCCccC-hhHHhhhhhhhCCCC
Q 038068 141 SPLPCPLSDCSFLGC-SSQFVRHFMAKHNIS 170 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H~~~ 170 (269)
+|+.|+. |+.... ...|..|........
T Consensus 11 ~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2yso_A 11 KSHQCRE--CGEIFFQYVSLIEHQVLHMGQK 39 (46)
T ss_dssp CCEECTT--TCCEESSHHHHHHHHHHHSCCS
T ss_pred CCEEccc--cChhhCCHHHHHHHHHHhCCCC
Confidence 5788884 886644 568999987654433
No 265
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.58 E-value=45 Score=18.69 Aligned_cols=27 Identities=19% Similarity=0.315 Sum_probs=18.2
Q ss_pred eeeeCCCCCCCCccC-hhHHhhhhhhhCCC
Q 038068 141 SPLPCPLSDCSFLGC-SSQFVRHFMAKHNI 169 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H~~ 169 (269)
+|+.|+. |+.... ...|..|....+..
T Consensus 11 k~~~C~~--C~k~f~~~~~L~~H~~~H~~~ 38 (46)
T 2ytq_A 11 KPYGCSE--CGKAFSSKSYLIIHMRTHSGE 38 (46)
T ss_dssp CSCBCSS--SCCBCSCHHHHHHHHTTTCCS
T ss_pred CCcCCCc--cChhhCChHHHHHHHHHhCCC
Confidence 4677874 886644 56899998764433
No 266
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=27.41 E-value=39 Score=19.31 Aligned_cols=31 Identities=13% Similarity=0.281 Sum_probs=18.6
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCCCccc
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNISAVP 173 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~~~~ 173 (269)
+++.|+. |+... ....|..|....+......
T Consensus 11 k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~ 42 (48)
T 2epr_A 11 KQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYS 42 (48)
T ss_dssp CSEEETT--TTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred cCeeCCC--CCcccCCHHHHHHHHHhcCCCCCcc
Confidence 4567774 87654 4567888876544443333
No 267
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.04 E-value=46 Score=18.60 Aligned_cols=28 Identities=21% Similarity=0.324 Sum_probs=19.1
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNIS 170 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~ 170 (269)
+|+.|+ .|+... ....|..|....+...
T Consensus 11 ~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2en1_A 11 KPFKCE--ECGKRFTQNSQLHSHQRVHTGEK 39 (46)
T ss_dssp CSEEET--TTTEEESSHHHHHHHGGGGSCCC
T ss_pred CCeeCC--CCCcccCCHHHHHHHHHHcCCCC
Confidence 567888 488664 4568999987654443
No 268
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.63 E-value=40 Score=18.96 Aligned_cols=28 Identities=14% Similarity=0.071 Sum_probs=19.2
Q ss_pred eeeeCCCCCCCCccC-hhHHhhhhhhhCCCC
Q 038068 141 SPLPCPLSDCSFLGC-SSQFVRHFMAKHNIS 170 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H~~~ 170 (269)
+|+.|+. |+.... ...|..|........
T Consensus 11 k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2em8_A 11 KPYKCVE--CGKGYKRRLDLDFHQRVHTGEK 39 (46)
T ss_dssp CSEECSS--SCCEESSHHHHHHHHHHHHCCC
T ss_pred CCeECcc--cCchhCCHHHHHHHHHHHcCCC
Confidence 5778884 887644 568999987654433
No 269
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.53 E-value=47 Score=18.55 Aligned_cols=27 Identities=22% Similarity=0.437 Sum_probs=18.7
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
+|+.|+. |+... ....|..|....+..
T Consensus 11 k~~~C~~--C~k~f~~~~~L~~H~~~H~~~ 38 (46)
T 2em7_A 11 KPYKCEE--CGKGFICRRDLYTHHMVHTGE 38 (46)
T ss_dssp CSEECSS--SCCEESCHHHHHHHGGGGTTC
T ss_pred cCccCCC--ccchhCCHHHHHHHHHHhCCC
Confidence 5788884 88664 457899997764433
No 270
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.36 E-value=40 Score=18.87 Aligned_cols=29 Identities=17% Similarity=0.342 Sum_probs=19.3
Q ss_pred CeeeeCCCCCCCCcc-ChhHHhhhhhhhCCCC
Q 038068 140 HSPLPCPLSDCSFLG-CSSQFVRHFMAKHNIS 170 (269)
Q Consensus 140 ~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~ 170 (269)
-+|+.|+. |+... ....|..|....+...
T Consensus 10 ~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~ 39 (46)
T 2eoe_A 10 EKPYKCNE--CGKVFTQNSHLANHQRIHTGVK 39 (46)
T ss_dssp CCSSEETT--TTEECSSHHHHHHHHGGGSCCC
T ss_pred CCCeECCC--cChhhCCHHHHHHHHHHcCCCC
Confidence 35678884 88664 4568999987654443
No 271
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.24 E-value=51 Score=18.43 Aligned_cols=26 Identities=23% Similarity=0.474 Sum_probs=18.3
Q ss_pred eeeeCCCCCCCCccC-hhHHhhhhhhhCC
Q 038068 141 SPLPCPLSDCSFLGC-SSQFVRHFMAKHN 168 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H~ 168 (269)
+|+.|+. |+.... ...|..|....|.
T Consensus 11 k~~~C~~--C~k~F~~~~~L~~H~~~~H~ 37 (47)
T 2epx_A 11 KPYECIE--CGKAFIQNTSLIRHWRYYHT 37 (47)
T ss_dssp CSBCCSS--SCCCBSSHHHHHHHHTTTTT
T ss_pred CCEECCc--cCchhCChHHHHHHhHhhcC
Confidence 5678884 886654 5689999884554
No 272
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=26.15 E-value=93 Score=21.80 Aligned_cols=41 Identities=22% Similarity=0.363 Sum_probs=26.3
Q ss_pred CeeeccCCCCCCc-Cceeecc-CCceechhchhhc------CCCCCCCCC
Q 038068 53 DIFDCPICFEPLT-VPVFQCV-NGHLACSDCCAKI------KRNCPTCSS 94 (269)
Q Consensus 53 ~~l~C~iC~~~l~-~Pv~~c~-cgH~fC~~C~~~~------~~~Cp~C~~ 94 (269)
+...| ||...-. ..+++|. |...|=..|+... ...||.|+.
T Consensus 27 d~vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~~w~C~~C~~ 75 (98)
T 2lv9_A 27 DVTRC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPDTYLCERCQP 75 (98)
T ss_dssp CBCCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCSSBCCTTTSS
T ss_pred CCEEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCCCEECCCCcC
Confidence 45678 8877653 4566775 7766666666432 247999974
No 273
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.95 E-value=36 Score=19.21 Aligned_cols=28 Identities=18% Similarity=0.201 Sum_probs=18.8
Q ss_pred eeeeCCCCCCCCccC-hhHHhhhhhhhCCCC
Q 038068 141 SPLPCPLSDCSFLGC-SSQFVRHFMAKHNIS 170 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H~~~ 170 (269)
+|+.|+. |+.... ...|..|....+...
T Consensus 11 k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2ytm_A 11 KPYKCME--CGKAFGDNSSCTQHQRLHTGQR 39 (46)
T ss_dssp CSSSBTT--TTBCCSSHHHHHHHHHHHHSCC
T ss_pred CCcCCCC--CCchhCCHHHHHHHHHHcCCCC
Confidence 4677874 886644 568999987654443
No 274
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=25.95 E-value=65 Score=20.14 Aligned_cols=44 Identities=25% Similarity=0.427 Sum_probs=28.1
Q ss_pred ccccccc-cchhhhhcc-CCCeeeeCCCCCCCCcc-ChhHHhhhhhhhCC
Q 038068 122 CQQKMSF-SKKRGHEKT-CQHSPLPCPLSDCSFLG-CSSQFVRHFMAKHN 168 (269)
Q Consensus 122 C~~~~~~-~~~~~He~~-C~~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~ 168 (269)
|...+.. ..|..|++. =.-+|+.|+ .|+..- ....|..|.+. |.
T Consensus 10 C~k~F~~~~~L~~H~~~Ht~ekp~~C~--~C~k~F~~~~~L~~H~~~-Ht 56 (60)
T 4gzn_C 10 CGKTYRDASGLSRHRRAHLGYRPRSCP--ECGKCFRDQSEVNRHLKV-HQ 56 (60)
T ss_dssp TCCEESSHHHHHHHHHHHHTCCCEECT--TTCCEESSHHHHHHHGGG-GS
T ss_pred CCCEeCCHHHHHHHHHHhCCCcCeECC--CCCCCcCCHHHHHHHhCc-cC
Confidence 6655543 456677653 234678898 488764 45789999764 53
No 275
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=25.82 E-value=59 Score=16.53 Aligned_cols=25 Identities=28% Similarity=0.332 Sum_probs=17.9
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKH 167 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H 167 (269)
.|+.|+. |+... ....|..|....+
T Consensus 6 k~~~C~~--C~k~f~~~~~L~~H~~~h~ 31 (35)
T 2elx_A 6 SGYVCAL--CLKKFVSSIRLRSHIREVH 31 (35)
T ss_dssp CSEECSS--SCCEESSHHHHHHHHHHTS
T ss_pred CCeECCC--CcchhCCHHHHHHHHHHHc
Confidence 4678884 88664 4578999987644
No 276
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=25.73 E-value=56 Score=15.83 Aligned_cols=25 Identities=20% Similarity=0.304 Sum_probs=16.5
Q ss_pred eeeCCCCCCCCcc-ChhHHhhhhhhhCC
Q 038068 142 PLPCPLSDCSFLG-CSSQFVRHFMAKHN 168 (269)
Q Consensus 142 p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~ 168 (269)
|+.|+ .|+... ....|..|....|.
T Consensus 2 ~~~C~--~C~k~f~~~~~l~~H~~~~H~ 27 (30)
T 1paa_A 2 AYACG--LCNRAFTRRDLLIRHAQKIHS 27 (30)
T ss_dssp CSBCT--TTCCBCSSSHHHHHHHTTTSC
T ss_pred CcCCc--ccCcccCChHHHHHHHHHHcc
Confidence 45777 487654 45688999655564
No 277
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.50 E-value=37 Score=19.09 Aligned_cols=29 Identities=21% Similarity=0.308 Sum_probs=19.4
Q ss_pred CeeeeCCCCCCCCcc-ChhHHhhhhhhhCCCC
Q 038068 140 HSPLPCPLSDCSFLG-CSSQFVRHFMAKHNIS 170 (269)
Q Consensus 140 ~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~ 170 (269)
-.|+.|+. |+... ....|..|....+...
T Consensus 10 ~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2yu8_A 10 EKPYKCNE--CGKVFTQNSHLARHRRVHTGGK 39 (46)
T ss_dssp CSSEECSS--SCCEESSSHHHHHHTHHHHSCC
T ss_pred CCCeECCc--CCchhCCHHHHHHHHHhcCCCC
Confidence 35678884 88664 4578999987654443
No 278
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.47 E-value=1.3e+02 Score=19.79 Aligned_cols=33 Identities=21% Similarity=0.423 Sum_probs=22.7
Q ss_pred CeeeccCCCCCCcCceeec--cCCceechhchhhc
Q 038068 53 DIFDCPICFEPLTVPVFQC--VNGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c--~cgH~fC~~C~~~~ 85 (269)
+=|.|..|...|..-.+.. .-|..+|..|..++
T Consensus 41 ~CF~C~~C~~~L~~~~~~~~~~~g~~yC~~~y~~~ 75 (82)
T 2co8_A 41 SCFRCHTCEATLWPGGYEQHPGDGHFYCLQHLPQT 75 (82)
T ss_dssp TTCBCSSSCCBCCTTSEECCTTTCCCEETTTCCCC
T ss_pred CcCEEcCCCCCcCCCceeEeCcCCEEEChHHHHhh
Confidence 4578888888777655432 36788888877654
No 279
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=25.36 E-value=51 Score=15.81 Aligned_cols=25 Identities=32% Similarity=0.582 Sum_probs=16.9
Q ss_pred eeeCCCCCCCCcc-ChhHHhhhhhhhCC
Q 038068 142 PLPCPLSDCSFLG-CSSQFVRHFMAKHN 168 (269)
Q Consensus 142 p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~ 168 (269)
|+.|+ .|+... ....|..|....|.
T Consensus 2 ~~~C~--~C~k~f~~~~~l~~H~~~h~~ 27 (30)
T 1klr_A 2 TYQCQ--YCEFRSADSSNLKTHIKTKHS 27 (30)
T ss_dssp CCCCS--SSSCCCSCSHHHHHHHHHHTS
T ss_pred CccCC--CCCCccCCHHHHHHHHHHHcc
Confidence 45677 477654 45789999876654
No 280
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=25.34 E-value=55 Score=15.68 Aligned_cols=22 Identities=23% Similarity=0.528 Sum_probs=15.3
Q ss_pred eeeCCCCCCCCcc-ChhHHhhhhhh
Q 038068 142 PLPCPLSDCSFLG-CSSQFVRHFMA 165 (269)
Q Consensus 142 p~~Cp~~~C~~~g-~~~~l~~Hl~~ 165 (269)
|+.|+ .|+... ....|..|...
T Consensus 2 ~~~C~--~C~k~f~~~~~l~~H~~~ 24 (29)
T 1rik_A 2 KFACP--ECPKRFMRSDHLTLHILL 24 (29)
T ss_dssp CEECS--SSSCEESCSHHHHHHHTG
T ss_pred CccCC--CCCchhCCHHHHHHHHHH
Confidence 56787 487654 45688888765
No 281
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=25.15 E-value=21 Score=23.65 Aligned_cols=27 Identities=30% Similarity=0.656 Sum_probs=17.8
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhch
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCC 82 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~ 82 (269)
+.|.||+|...|.-- -.-|-.+|..|-
T Consensus 7 ~iL~CP~ck~~L~~~---~~~~~LiC~~cg 33 (68)
T 2hf1_A 7 EILVCPLCKGPLVFD---KSKDELICKGDR 33 (68)
T ss_dssp EECBCTTTCCBCEEE---TTTTEEEETTTT
T ss_pred hheECCCCCCcCeEe---CCCCEEEcCCCC
Confidence 778999999876532 124566666553
No 282
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=25.05 E-value=24 Score=19.10 Aligned_cols=10 Identities=40% Similarity=0.853 Sum_probs=5.0
Q ss_pred eeccCCCCCC
Q 038068 55 FDCPICFEPL 64 (269)
Q Consensus 55 l~C~iC~~~l 64 (269)
+.||+|...+
T Consensus 4 ~~CpvCk~q~ 13 (28)
T 2jvx_A 4 FCCPKCQYQA 13 (28)
T ss_dssp EECTTSSCEE
T ss_pred ccCccccccC
Confidence 4555555443
No 283
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.02 E-value=44 Score=18.80 Aligned_cols=26 Identities=27% Similarity=0.489 Sum_probs=17.8
Q ss_pred eeeeCCCCCCCCccC-hhHHhhhhhhhCC
Q 038068 141 SPLPCPLSDCSFLGC-SSQFVRHFMAKHN 168 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H~ 168 (269)
+|+.|+. |+.... ...|..|....+.
T Consensus 11 k~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2eon_A 11 KPYKCQV--CGKAFRVSSHLVQHHSVHSG 37 (46)
T ss_dssp CSCBCSS--SCCBCSSHHHHHHHTTTTTS
T ss_pred cccCCCC--CCcccCcHHHHHHHHHhcCC
Confidence 5678884 887644 5689999865433
No 284
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=24.69 E-value=16 Score=32.87 Aligned_cols=32 Identities=19% Similarity=0.632 Sum_probs=0.0
Q ss_pred CeeeccCCCCCCcCc--eeec-cCCceechhchhh
Q 038068 53 DIFDCPICFEPLTVP--VFQC-VNGHLACSDCCAK 84 (269)
Q Consensus 53 ~~l~C~iC~~~l~~P--v~~c-~cgH~fC~~C~~~ 84 (269)
+.-.|..|...|..- -..| .||++||..|...
T Consensus 374 ~~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~Cs~~ 408 (434)
T 3mpx_A 374 HVMMCMNCGCDFSLTLRRHHCHACGKIVCRNCSRN 408 (434)
T ss_dssp -----------------------------------
T ss_pred cCCcCCCcCCCCCCcchhhhcccCcCEeehhhCCC
Confidence 456799999887632 1345 4999999999854
No 285
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.51 E-value=42 Score=18.82 Aligned_cols=26 Identities=15% Similarity=0.221 Sum_probs=18.0
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHN 168 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~ 168 (269)
+|+.|+ .|+... ....|..|....+.
T Consensus 11 k~~~C~--~C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2ysp_A 11 KPYKCE--KCGKGYNSKFNLDMHQKVHTG 37 (46)
T ss_dssp CSEEET--TTTEEESCHHHHHHHHTTSCS
T ss_pred CCeECC--CCCCccCCHHHHHHHHHhhCC
Confidence 567888 488664 45689999876443
No 286
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=24.29 E-value=68 Score=15.23 Aligned_cols=23 Identities=17% Similarity=0.401 Sum_probs=15.8
Q ss_pred eeeCCCCCCCCcc-ChhHHhhhhhhh
Q 038068 142 PLPCPLSDCSFLG-CSSQFVRHFMAK 166 (269)
Q Consensus 142 p~~Cp~~~C~~~g-~~~~l~~Hl~~~ 166 (269)
|+.|+ .|+... ....|..|....
T Consensus 2 ~~~C~--~C~~~f~~~~~l~~H~~~h 25 (29)
T 1ard_A 2 SFVCE--VCTRAFARQEHLKRHYRSH 25 (29)
T ss_dssp CCBCT--TTCCBCSSHHHHHHHHHHH
T ss_pred CeECC--CCCcccCCHHHHHHHHHHh
Confidence 56787 487664 456889997754
No 287
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.22 E-value=47 Score=18.59 Aligned_cols=28 Identities=18% Similarity=0.238 Sum_probs=19.2
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNIS 170 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~ 170 (269)
.|+.|+. |+... ....|..|........
T Consensus 11 k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2emp_A 11 KPYMCNE--CGKAFSVYSSLTTHQVIHTGEK 39 (46)
T ss_dssp CSEECSS--SCCEESCHHHHHHHHHHHHCCS
T ss_pred cCeECCC--CCchhCCHHHHHHHHHHcCCCC
Confidence 5678884 88664 4578999987654443
No 288
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.20 E-value=63 Score=17.98 Aligned_cols=27 Identities=19% Similarity=0.324 Sum_probs=18.8
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
.|+.|+. |+... ....|..|....+..
T Consensus 11 k~~~C~~--C~k~f~~~~~L~~H~~~H~~~ 38 (46)
T 2ytj_A 11 KPYICAE--CGKAFTIRSNLIKHQKIHTKQ 38 (46)
T ss_dssp CSEECSS--SCCEESSHHHHHHHHHHTSCC
T ss_pred cCeECCC--CChhhCCHHHHHHHHHHcCCC
Confidence 5678884 88764 457899998764433
No 289
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=23.99 E-value=32 Score=21.06 Aligned_cols=25 Identities=12% Similarity=0.228 Sum_probs=15.2
Q ss_pred CCceechhchhhc-CCCCCCCCCCCc
Q 038068 73 NGHLACSDCCAKI-KRNCPTCSSPTV 97 (269)
Q Consensus 73 cgH~fC~~C~~~~-~~~Cp~C~~~~~ 97 (269)
||+.|=..=++.+ .-+||.|.-.+-
T Consensus 9 Cg~~fs~~el~~lP~IrCpyCGyrii 34 (48)
T 4ayb_P 9 CWKTFTDEQLKVLPGVRCPYCGYKII 34 (48)
T ss_dssp TTTTCCCCCSCCCSSSCCTTTCCSCE
T ss_pred cCCCccHHHHhhCCCcccCccCcEEE
Confidence 6666654444443 457999877654
No 290
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.96 E-value=55 Score=18.22 Aligned_cols=28 Identities=18% Similarity=0.255 Sum_probs=19.4
Q ss_pred CeeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 140 HSPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 140 ~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
-+|+.|+. |+... ....|..|....+..
T Consensus 10 ~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~ 38 (46)
T 2eow_A 10 EKPYKCNE--CGKAFRARSSLAIHQATHSGE 38 (46)
T ss_dssp CCCEECTT--SCCEESSHHHHHHHHHHHCCC
T ss_pred CCCeeccc--cCChhcCHHHHHHHHHHcCCC
Confidence 35788884 88764 457899998764443
No 291
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.73 E-value=66 Score=17.93 Aligned_cols=29 Identities=17% Similarity=0.181 Sum_probs=19.9
Q ss_pred CeeeeCCCCCCCCcc-ChhHHhhhhhhhCCCC
Q 038068 140 HSPLPCPLSDCSFLG-CSSQFVRHFMAKHNIS 170 (269)
Q Consensus 140 ~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~ 170 (269)
-.|+.|+. |+... ....|..|........
T Consensus 10 ~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2yto_A 10 EKPYKCSD--CGKAFTRKSGLHIHQQSHTGER 39 (46)
T ss_dssp CCCEECSS--SCCEESSHHHHHHHHHHHTCCC
T ss_pred CCCEECcc--cCCccCCHhHHHHHHHHcCCCC
Confidence 35788984 88764 4578999987654433
No 292
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.42 E-value=72 Score=17.74 Aligned_cols=27 Identities=15% Similarity=0.127 Sum_probs=18.7
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
+|+.|+. |+... ....|..|....+..
T Consensus 11 k~~~C~~--C~k~F~~~~~L~~H~~~H~~~ 38 (46)
T 2emf_A 11 KHFECTE--CGKAFTRKSTLSMHQKIHTGE 38 (46)
T ss_dssp CCEECSS--SCCEESCHHHHHHHGGGTSCS
T ss_pred CCeECCC--CCchhCCHHHHHHHHHHhCCC
Confidence 5778884 88664 457899998764433
No 293
>1x6a_A LIMK-2, LIM domain kinase 2; LIM-kinase 2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.40 E-value=47 Score=21.89 Aligned_cols=33 Identities=18% Similarity=0.523 Sum_probs=22.9
Q ss_pred CeeeccCCCCCCcC-ceee-ccCCceechhchhhc
Q 038068 53 DIFDCPICFEPLTV-PVFQ-CVNGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~-Pv~~-c~cgH~fC~~C~~~~ 85 (269)
+=|.|..|..+|.. .-+. -.-|..+|..|..+.
T Consensus 40 ~CF~C~~C~~~L~~g~~f~~~~~~~~~C~~c~~~~ 74 (81)
T 1x6a_A 40 ECFACMSCKVIIEDGDAYALVQHATLYCGKCHNEV 74 (81)
T ss_dssp TSCBCTTTCCBCCTTSCEEECSSSCEEEHHHHHHH
T ss_pred ccCCccCCCCccCCCCcEEEeeCCEEECHHHHHHH
Confidence 56788888888853 2222 257788888887765
No 294
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=23.38 E-value=58 Score=15.52 Aligned_cols=23 Identities=22% Similarity=0.408 Sum_probs=15.5
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhh
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMA 165 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~ 165 (269)
+|+.|+ .|+... ....|..|.+.
T Consensus 2 k~~~C~--~C~k~f~~~~~l~~H~~~ 25 (28)
T 2kvf_A 2 RPYSCS--VCGKRFSLKHQMETHYRV 25 (28)
T ss_dssp CSEECS--SSCCEESCHHHHHHHHTT
T ss_pred cCccCC--CCCcccCCHHHHHHHHHh
Confidence 356787 487664 45688888764
No 295
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=23.37 E-value=76 Score=16.16 Aligned_cols=25 Identities=20% Similarity=0.449 Sum_probs=17.8
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKH 167 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H 167 (269)
+|+.|+. |+... ....|..|....+
T Consensus 6 k~~~C~~--C~k~f~~~~~l~~H~~~H~ 31 (35)
T 1srk_A 6 RPFVCRI--CLSAFTTKANCARHLKVHT 31 (35)
T ss_dssp SCEECSS--SCCEESSHHHHHHHHGGGT
T ss_pred cCeeCCC--CCcccCCHHHHHHHHHHcC
Confidence 5678884 88764 4578999986543
No 296
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=23.36 E-value=24 Score=23.45 Aligned_cols=27 Identities=33% Similarity=0.668 Sum_probs=17.7
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhch
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCC 82 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~ 82 (269)
+.|.||+|...|.--. .-|-.+|..|-
T Consensus 7 eiL~CP~ck~~L~~~~---~~~~LiC~~cg 33 (69)
T 2pk7_A 7 DILACPICKGPLKLSA---DKTELISKGAG 33 (69)
T ss_dssp GTCCCTTTCCCCEECT---TSSEEEETTTT
T ss_pred hheeCCCCCCcCeEeC---CCCEEEcCCCC
Confidence 6789999998776321 24556665553
No 297
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=23.34 E-value=22 Score=23.66 Aligned_cols=27 Identities=30% Similarity=0.625 Sum_probs=17.9
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhch
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCC 82 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~ 82 (269)
+.|.||+|...|.-- -.-|-.+|..|-
T Consensus 7 ~iL~CP~ck~~L~~~---~~~~~LiC~~cg 33 (70)
T 2js4_A 7 DILVCPVCKGRLEFQ---RAQAELVCNADR 33 (70)
T ss_dssp CCCBCTTTCCBEEEE---TTTTEEEETTTT
T ss_pred hheECCCCCCcCEEe---CCCCEEEcCCCC
Confidence 789999999976522 134566666553
No 298
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=23.21 E-value=1.3e+02 Score=19.50 Aligned_cols=39 Identities=21% Similarity=0.462 Sum_probs=25.8
Q ss_pred eeccCCCCCCcCceeecc-CCceechhchhhc-------CCCCCCCCCC
Q 038068 55 FDCPICFEPLTVPVFQCV-NGHLACSDCCAKI-------KRNCPTCSSP 95 (269)
Q Consensus 55 l~C~iC~~~l~~Pv~~c~-cgH~fC~~C~~~~-------~~~Cp~C~~~ 95 (269)
-.|.+|.+- .-+..|. |...|=..|+... ...|+.|...
T Consensus 13 ~~C~vC~~~--~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 13 ARCGVCGDG--TDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGD 59 (66)
T ss_dssp CCCTTTSCC--TTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTC
T ss_pred CCcCCCCCC--CeEEECCCCCCceecccCCCccCcCCCCCEECccccCC
Confidence 468888874 2344564 7777777887532 2468988754
No 299
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.95 E-value=65 Score=17.90 Aligned_cols=27 Identities=19% Similarity=0.348 Sum_probs=19.0
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
.|+.|+. |+... ....|..|....+..
T Consensus 11 ~~~~C~~--C~k~F~~~~~L~~H~~~H~~~ 38 (46)
T 2em3_A 11 KPYECKV--CSKAFTQKAHLAQHQKTHTGE 38 (46)
T ss_dssp CSEECSS--SCCEESSHHHHHHHHHHHCCC
T ss_pred cCeECCC--CCcccCCHHHHHHHHHHhCCC
Confidence 5678884 88664 456899998765443
No 300
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.94 E-value=49 Score=18.52 Aligned_cols=28 Identities=18% Similarity=0.299 Sum_probs=19.2
Q ss_pred CeeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 140 HSPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 140 ~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
-.|+.|+. |+... ....|..|....+..
T Consensus 10 ~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~ 38 (46)
T 2eoo_A 10 ERPYGCNE--CGKNFGRHSHLIEHLKRHFRE 38 (46)
T ss_dssp CCCEECSS--SCCEESSHHHHHHHHHHHHST
T ss_pred CCCEEccc--cCcccCCHHHHHHHHHHHcCC
Confidence 35788884 88764 456899998764443
No 301
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=22.74 E-value=80 Score=16.98 Aligned_cols=27 Identities=19% Similarity=0.384 Sum_probs=18.6
Q ss_pred eeeeCCCCCCCCccC-hhHHhhhhhhhCCC
Q 038068 141 SPLPCPLSDCSFLGC-SSQFVRHFMAKHNI 169 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H~~ 169 (269)
+|+.|+ .|+.... ...|..|....+..
T Consensus 9 k~~~C~--~C~k~f~~~~~L~~H~~~H~~~ 36 (42)
T 2el5_A 9 NPYECS--ECGKAFNRKDQLISHQRTHAGE 36 (42)
T ss_dssp CSEECS--SSCCEESSHHHHHHHHGGGCCC
T ss_pred CCccCC--CcChhhCCHHHHHHHHHhcCCC
Confidence 567888 4887644 56899998764433
No 302
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.67 E-value=53 Score=18.40 Aligned_cols=29 Identities=17% Similarity=0.387 Sum_probs=19.8
Q ss_pred CeeeeCCCCCCCCcc-ChhHHhhhhhhhCCCC
Q 038068 140 HSPLPCPLSDCSFLG-CSSQFVRHFMAKHNIS 170 (269)
Q Consensus 140 ~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~ 170 (269)
-.|+.|+. |+... ....|..|....+...
T Consensus 10 ~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2eoz_A 10 EKPYSCNV--CGKAFVLSAHLNQHLRVHTQET 39 (46)
T ss_dssp CCSEEETT--TTEEESSHHHHHHHHHHHSSCC
T ss_pred CCCeECcc--cChhhCCHHHHHHHHHHhCCCC
Confidence 35788884 88664 4578999987655443
No 303
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.52 E-value=64 Score=17.91 Aligned_cols=27 Identities=19% Similarity=0.363 Sum_probs=18.6
Q ss_pred CeeeeCCCCCCCCcc-ChhHHhhhhhhhCC
Q 038068 140 HSPLPCPLSDCSFLG-CSSQFVRHFMAKHN 168 (269)
Q Consensus 140 ~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~ 168 (269)
-.|+.|+. |+... ....|..|....+.
T Consensus 10 ~k~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2ytf_A 10 EKPFECSE--CQKAFNTKSNLIVHQRTHTG 37 (46)
T ss_dssp CCSEECSS--SCCEESSHHHHHHHHHTSCS
T ss_pred CCCcCCCC--CCcccCCHHHHHHHHHHhCC
Confidence 35778884 88664 45789999875443
No 304
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=22.28 E-value=63 Score=15.30 Aligned_cols=23 Identities=22% Similarity=0.475 Sum_probs=15.6
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhh
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMA 165 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~ 165 (269)
+|+.|+ .|+... ....|..|.+.
T Consensus 2 k~~~C~--~C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvh_A 2 KPFSCS--LCPQRSRDFSAMTKHLRT 25 (27)
T ss_dssp CCEECS--SSSCEESSHHHHHHHHHH
T ss_pred cCccCC--CcChhhCCHHHHHHHHHH
Confidence 367787 488664 45678888753
No 305
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=22.21 E-value=61 Score=17.99 Aligned_cols=28 Identities=21% Similarity=0.363 Sum_probs=18.8
Q ss_pred CeeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 140 HSPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 140 ~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
-+|+.|+. |+... ....|..|....+..
T Consensus 10 ~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~ 38 (46)
T 2el4_A 10 VKPYGCSQ--CAKTFSLKSQLIVHQRSHTGV 38 (46)
T ss_dssp CCSEECSS--SSCEESSHHHHHHHGGGSSSC
T ss_pred CCceECCC--CCchhCCHHHHHHHHHHhCCC
Confidence 35678884 88664 457899998764433
No 306
>2l4z_A DNA endonuclease RBBP8, LIM domain transcription LMO4; protein-protein interaction, LIM-interaction DOM LMO4, RBBP8/CTIP, LIM-only protein; HET: DNA; NMR {Homo sapiens}
Probab=22.20 E-value=34 Score=25.14 Aligned_cols=39 Identities=15% Similarity=0.319 Sum_probs=21.7
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhhcCCCCCCCCCCC
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPT 96 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~~~~~Cp~C~~~~ 96 (269)
..-.|..|..++........-|..+=..|+ .|..|+.++
T Consensus 60 ~~~~C~~C~~~I~~~~~v~a~~~~wH~~CF-----~C~~C~~~L 98 (123)
T 2l4z_A 60 SWKRCAGCGGKIADRFLLYAMDSYWHSRCL-----KCSSCQAQL 98 (123)
T ss_dssp SCSBBSSSSSBCCSSSEEEETTEEEETTTS-----BCTTTCCBG
T ss_pred cCCcCcCCCCCcCCcEEEEeCCcEEccccc-----CcCcCCCcc
Confidence 345788888877765322244544444444 355565555
No 307
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.17 E-value=74 Score=16.31 Aligned_cols=24 Identities=25% Similarity=0.685 Sum_probs=17.1
Q ss_pred eeeeCCCCCCCCccC-hhHHhhhhhhh
Q 038068 141 SPLPCPLSDCSFLGC-SSQFVRHFMAK 166 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g~-~~~l~~Hl~~~ 166 (269)
.|+.|+. |+.... ...|..|....
T Consensus 8 k~~~C~~--C~k~f~~~~~l~~H~~~H 32 (36)
T 2elt_A 8 KPYKCPQ--CSYASAIKANLNVHLRKH 32 (36)
T ss_dssp CSEECSS--SSCEESSHHHHHHHHHHH
T ss_pred CCCCCCC--CCcccCCHHHHHHHHHHc
Confidence 4678884 887644 56899997653
No 308
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=22.13 E-value=81 Score=16.92 Aligned_cols=25 Identities=16% Similarity=0.218 Sum_probs=17.7
Q ss_pred eeeeCCCCCCCCccC-hhHHhhhhhhhC
Q 038068 141 SPLPCPLSDCSFLGC-SSQFVRHFMAKH 167 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H 167 (269)
.|+.|+. |+.... ...|..|.....
T Consensus 10 ~~~~C~~--C~k~f~~~~~l~~H~~~H~ 35 (42)
T 2epc_A 10 TPYLCGQ--CGKSFTQRGSLAVHQRSCS 35 (42)
T ss_dssp CCEECSS--SCCEESSHHHHHHHHHHTT
T ss_pred CCeECCC--CCcccCCHHHHHHHhhhcC
Confidence 5678884 887654 568999976543
No 309
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=21.98 E-value=66 Score=17.94 Aligned_cols=28 Identities=25% Similarity=0.319 Sum_probs=19.2
Q ss_pred CeeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 140 HSPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 140 ~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
-.|+.|+. |+... ....|..|.......
T Consensus 10 ~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~ 38 (46)
T 2emj_A 10 EKPFECAE--CGKSFSISSQLATHQRIHTGE 38 (46)
T ss_dssp CCSEECSS--SSCEESSHHHHHHHHHHHTTS
T ss_pred CCCEECCC--CCcccCCHHHHHHHHHHhCCC
Confidence 35778884 88764 457899998764433
No 310
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=21.87 E-value=54 Score=15.56 Aligned_cols=23 Identities=17% Similarity=0.283 Sum_probs=14.9
Q ss_pred eeeCCCCCCCCcc-ChhHHhhhhhhh
Q 038068 142 PLPCPLSDCSFLG-CSSQFVRHFMAK 166 (269)
Q Consensus 142 p~~Cp~~~C~~~g-~~~~l~~Hl~~~ 166 (269)
|+.|+. |+... ....|..|....
T Consensus 2 ~~~C~~--C~~~f~~~~~l~~H~~~h 25 (29)
T 2m0e_A 2 EHKCPH--CDKKFNQVGNLKAHLKIH 25 (29)
T ss_dssp CCCCSS--CCCCCCTTTHHHHHHHHH
T ss_pred CCcCCC--CCcccCCHHHHHHHHHHh
Confidence 556774 77654 356788887653
No 311
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.83 E-value=80 Score=16.57 Aligned_cols=26 Identities=23% Similarity=0.558 Sum_probs=18.4
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHN 168 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~ 168 (269)
+|+.|+ .|+... ....|..|....|.
T Consensus 8 k~~~C~--~C~k~f~~~~~L~~H~~~~H~ 34 (37)
T 2elm_A 8 HLYYCS--QCHYSSITKNCLKRHVIQKHS 34 (37)
T ss_dssp CEEECS--SSSCEEECHHHHHHHHHHHTC
T ss_pred cCeECC--CCCcccCCHHHHHHHHHHHcc
Confidence 578898 498764 45689999445564
No 312
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=21.81 E-value=62 Score=30.35 Aligned_cols=38 Identities=18% Similarity=0.481 Sum_probs=28.2
Q ss_pred CCeeeccCCCCCCc---Cceeecc-CCceechhchhhcCCCCC
Q 038068 52 QDIFDCPICFEPLT---VPVFQCV-NGHLACSDCCAKIKRNCP 90 (269)
Q Consensus 52 ~~~l~C~iC~~~l~---~Pv~~c~-cgH~fC~~C~~~~~~~Cp 90 (269)
...-.|.+|...+. ..-++|. ||-.+|..|...+ ..|+
T Consensus 527 ~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~v-~~C~ 568 (587)
T 3ky9_A 527 EETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGRV-PPCG 568 (587)
T ss_dssp SSCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGGS-CCC-
T ss_pred CCCcccccccccccccccCCcCCCCCCCccchhhhhcC-CCCC
Confidence 35678999999873 2345676 9999999999987 3553
No 313
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.73 E-value=73 Score=17.12 Aligned_cols=25 Identities=16% Similarity=0.372 Sum_probs=17.6
Q ss_pred eeeeCCCCCCCCccC-hhHHhhhhhhhC
Q 038068 141 SPLPCPLSDCSFLGC-SSQFVRHFMAKH 167 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H 167 (269)
.|+.|+. |+.... ...|..|....+
T Consensus 10 k~~~C~~--C~k~f~~~~~L~~H~~~H~ 35 (42)
T 2ytb_A 10 KPYRCDQ--CGKAFSQKGSLIVHIRVHT 35 (42)
T ss_dssp CSBCCTT--TTCCBSSHHHHHTTGGGTS
T ss_pred CCeeCCC--ccchhCCHHHHHHHHHHhC
Confidence 5678884 886644 578999987543
No 314
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.41 E-value=71 Score=17.51 Aligned_cols=26 Identities=19% Similarity=0.406 Sum_probs=18.3
Q ss_pred eeeeCCCCCCCCccC-hhHHhhhhhhhCC
Q 038068 141 SPLPCPLSDCSFLGC-SSQFVRHFMAKHN 168 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H~ 168 (269)
.|+.|+. |+.... ...|..|....+.
T Consensus 11 k~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (44)
T 2yu5_A 11 NPFKCSK--CDRVFTQRNYLVQHERTHAR 37 (44)
T ss_dssp CSEECSS--SSCEESSSHHHHHHHHHCCC
T ss_pred CCeECCC--CCchhCCHHHHHHHhHhcCC
Confidence 5788984 887644 5789999876443
No 315
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=21.07 E-value=31 Score=24.95 Aligned_cols=21 Identities=33% Similarity=0.569 Sum_probs=14.7
Q ss_pred cCCceechhchhhc--CCCCCCCCCCC
Q 038068 72 VNGHLACSDCCAKI--KRNCPTCSSPT 96 (269)
Q Consensus 72 ~cgH~fC~~C~~~~--~~~Cp~C~~~~ 96 (269)
.||+.| ...+ ...||.|+..-
T Consensus 72 ~CG~~F----~~~~~kPsrCP~CkSe~ 94 (105)
T 2gmg_A 72 KCGFVF----KAEINIPSRCPKCKSEW 94 (105)
T ss_dssp TTCCBC----CCCSSCCSSCSSSCCCC
T ss_pred hCcCee----cccCCCCCCCcCCCCCc
Confidence 599998 2333 46899998753
No 316
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.07 E-value=79 Score=17.50 Aligned_cols=27 Identities=22% Similarity=0.285 Sum_probs=18.7
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
.|+.|+. |+... ....|..|....+..
T Consensus 11 k~~~C~~--C~k~f~~~~~L~~H~~~H~~~ 38 (46)
T 2ep2_A 11 KPYECSI--CGKSFTKKSQLHVHQQIHTGE 38 (46)
T ss_dssp CSEECSS--SCCEESSHHHHHHHHHTTSSC
T ss_pred cCcCCCC--CCcccCCHHHHHHHHHHhCCC
Confidence 5678884 88764 457899998754433
No 317
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=21.07 E-value=92 Score=24.19 Aligned_cols=31 Identities=23% Similarity=0.450 Sum_probs=24.0
Q ss_pred CeeeccCCCCCCcCceeecc---CCceechhchhhc
Q 038068 53 DIFDCPICFEPLTVPVFQCV---NGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~---cgH~fC~~C~~~~ 85 (269)
....|.+|.+= .-++.|. |-..||..|+...
T Consensus 78 ~~~yC~wC~~G--g~l~~Cdn~~C~r~FC~~CI~~n 111 (159)
T 3a1b_A 78 YQSYCTICCGG--REVLMCGNNNCCRCFCVECVDLL 111 (159)
T ss_dssp SBSSCTTTSCC--SEEEECSSTTTCCEEEHHHHHHH
T ss_pred CcceeeEecCC--CeEEeeCCCCCCCchhHHHHHHh
Confidence 56678888873 3456676 8899999999876
No 318
>2gvi_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.87A {Thermoplasma acidophilum} SCOP: d.81.3.1 g.39.1.18
Probab=20.83 E-value=33 Score=27.71 Aligned_cols=32 Identities=19% Similarity=0.237 Sum_probs=25.0
Q ss_pred CeeeccCCCCCCcCceeeccCCceechhchhh
Q 038068 53 DIFDCPICFEPLTVPVFQCVNGHLACSDCCAK 84 (269)
Q Consensus 53 ~~l~C~iC~~~l~~Pv~~c~cgH~fC~~C~~~ 84 (269)
....|++|.+.+-.+...-..|..+|..|...
T Consensus 171 ~~~~C~~CGE~~~~~~~~~~~g~~~C~~C~~~ 202 (204)
T 2gvi_A 171 AKVRCDVCGEYTYEADAKLLNGKPVCKPDYYG 202 (204)
T ss_dssp CEEECTTTCCEEEGGGCEEETTEEECHHHHHC
T ss_pred CceECCCCCCchhhcceeeeCCcEEChhhhcc
Confidence 56889999998877633335799999999865
No 319
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.65 E-value=68 Score=17.80 Aligned_cols=27 Identities=26% Similarity=0.392 Sum_probs=17.9
Q ss_pred CeeeeCCCCCCCCcc-ChhHHhhhhhhhCC
Q 038068 140 HSPLPCPLSDCSFLG-CSSQFVRHFMAKHN 168 (269)
Q Consensus 140 ~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~ 168 (269)
-.|+.|+. |+... ....|..|....+.
T Consensus 10 ~k~~~C~~--C~k~F~~~~~L~~H~~~H~~ 37 (46)
T 2enf_A 10 EKPYKCNE--CGKVFTQNSHLVRHRGIHTG 37 (46)
T ss_dssp CCSCBCSS--SCCBCSSHHHHHHHHTTTTT
T ss_pred CcCeECCC--CCcccCCHHHHHHHHHhhCC
Confidence 35678884 88664 45689999765443
No 320
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.64 E-value=78 Score=17.10 Aligned_cols=25 Identities=20% Similarity=0.356 Sum_probs=17.5
Q ss_pred eeeeCCCCCCCCccC-hhHHhhhhhhhC
Q 038068 141 SPLPCPLSDCSFLGC-SSQFVRHFMAKH 167 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g~-~~~l~~Hl~~~H 167 (269)
+|+.|+ .|+.... ...|..|....+
T Consensus 10 k~~~C~--~C~k~f~~~~~L~~H~~~H~ 35 (42)
T 2eos_A 10 KPYPCE--ICGTRFRHLQTLKSHLRIHT 35 (42)
T ss_dssp CCBCCS--SSCCCBSSHHHHHHHTTTTS
T ss_pred CCEECC--CCCCccCCHHHHHHHHHhcC
Confidence 567888 4887654 568999977544
No 321
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=20.55 E-value=1.2e+02 Score=19.78 Aligned_cols=42 Identities=26% Similarity=0.631 Sum_probs=24.1
Q ss_pred CeeeccCCCCCCcC-ceeecc-CCceechhchhhc-------CCCCCCCCC
Q 038068 53 DIFDCPICFEPLTV-PVFQCV-NGHLACSDCCAKI-------KRNCPTCSS 94 (269)
Q Consensus 53 ~~l~C~iC~~~l~~-Pv~~c~-cgH~fC~~C~~~~-------~~~Cp~C~~ 94 (269)
+...|++|..+-.. .+.+|. |...|=..|+... ...||.|..
T Consensus 17 ~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~ 67 (75)
T 2k16_A 17 QIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCAN 67 (75)
T ss_dssp EEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHH
T ss_pred CCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccC
Confidence 45679999887543 355664 5544444555432 235777744
No 322
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.55 E-value=1.7e+02 Score=19.64 Aligned_cols=33 Identities=30% Similarity=0.521 Sum_probs=22.9
Q ss_pred CeeeccCCCCCCcCc---eeec-cCCceechhchhhc
Q 038068 53 DIFDCPICFEPLTVP---VFQC-VNGHLACSDCCAKI 85 (269)
Q Consensus 53 ~~l~C~iC~~~l~~P---v~~c-~cgH~fC~~C~~~~ 85 (269)
..-.|..|.+.|-.- -..| .|.|.+|..|....
T Consensus 24 ~~r~CarC~~~LG~l~~~g~~C~~Ck~rVC~~Crv~~ 60 (76)
T 2csz_A 24 SDRTCARCQESLGRLSPKTNTCRGCNHLVCRDCRIQE 60 (76)
T ss_dssp CCCBCSSSCCBCSSSCTTTSEETTTTEECCTTSEEEC
T ss_pred CccchhhhCccccccccCCCcCcccChhhcccccccC
Confidence 556899999987422 1134 48999999997554
No 323
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=20.51 E-value=57 Score=18.13 Aligned_cols=29 Identities=17% Similarity=0.447 Sum_probs=19.1
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCCCc
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNISA 171 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~~~ 171 (269)
+|+.|+. |+... ....|..|.+..+....
T Consensus 9 k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~ 38 (45)
T 2epq_A 9 KPYSCPV--CGLRFKRKDRMSYHVRSHDGSVG 38 (45)
T ss_dssp CSSEETT--TTEECSCHHHHHHHHHHHSCCCC
T ss_pred CCCcCCC--CCcccCCHHHHHHHHHHccCCCC
Confidence 4667874 87664 45678889877555443
No 324
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.27 E-value=91 Score=17.21 Aligned_cols=27 Identities=15% Similarity=0.107 Sum_probs=18.6
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
+++.|+. |+... ....|..|....+..
T Consensus 11 ~~~~C~~--C~k~F~~~~~L~~H~~~H~~~ 38 (46)
T 2emi_A 11 RHYECSE--CGKAFIQKSTLSMHQRIHRGE 38 (46)
T ss_dssp CCEECSS--SCCEESSHHHHHHHHGGGCSC
T ss_pred CCCCCCC--CCcccCCHHHHHHHHhHhCCC
Confidence 5678884 88664 457899997764433
No 325
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=20.15 E-value=82 Score=14.65 Aligned_cols=21 Identities=24% Similarity=0.210 Sum_probs=13.8
Q ss_pred eeCCCCCCCCcc-ChhHHhhhhhh
Q 038068 143 LPCPLSDCSFLG-CSSQFVRHFMA 165 (269)
Q Consensus 143 ~~Cp~~~C~~~g-~~~~l~~Hl~~ 165 (269)
+.|+ .|+... ....|..|...
T Consensus 2 ~~C~--~C~k~f~~~~~l~~H~~~ 23 (27)
T 1znf_A 2 YKCG--LCERSFVEKSALSRHQRV 23 (27)
T ss_dssp CBCS--SSCCBCSSHHHHHHHGGG
T ss_pred ccCC--CCCCcCCCHHHHHHHHHH
Confidence 4676 477654 35678888764
No 326
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=20.15 E-value=43 Score=26.64 Aligned_cols=12 Identities=33% Similarity=1.018 Sum_probs=8.2
Q ss_pred CCCCCCCCCCCc
Q 038068 86 KRNCPTCSSPTV 97 (269)
Q Consensus 86 ~~~Cp~C~~~~~ 97 (269)
+..||.|..+-.
T Consensus 171 p~~CP~C~~~k~ 182 (191)
T 1lko_A 171 PELCPACAHPKA 182 (191)
T ss_dssp CSBCTTTCCBGG
T ss_pred CCCCCCCcCCHH
Confidence 347999987643
No 327
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.15 E-value=93 Score=17.12 Aligned_cols=27 Identities=22% Similarity=0.263 Sum_probs=18.3
Q ss_pred CeeeeCCCCCCCCcc-ChhHHhhhhhhhCC
Q 038068 140 HSPLPCPLSDCSFLG-CSSQFVRHFMAKHN 168 (269)
Q Consensus 140 ~~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~ 168 (269)
-.|+.|+. |+... ....|..|......
T Consensus 10 ~k~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2yts_A 10 EKPYICNE--CGKSFIQKSHLNRHRRIHTG 37 (46)
T ss_dssp CCSEECSS--SCCEESSHHHHHHHGGGTSS
T ss_pred CcCEECCC--CChhhCChHHHHHHHHhcCC
Confidence 35678884 88664 45789999765433
No 328
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.06 E-value=34 Score=19.30 Aligned_cols=27 Identities=19% Similarity=0.461 Sum_probs=17.3
Q ss_pred eeeeCCCCCCCCcc-ChhHHhhhhhhhCCC
Q 038068 141 SPLPCPLSDCSFLG-CSSQFVRHFMAKHNI 169 (269)
Q Consensus 141 ~p~~Cp~~~C~~~g-~~~~l~~Hl~~~H~~ 169 (269)
+|+.|+ .|+... ....|..|....+..
T Consensus 11 k~~~C~--~C~k~f~~~~~L~~H~~~H~~~ 38 (46)
T 2ytt_A 11 KPYQCS--ECGKSFSGSYRLTQHWITHTRE 38 (46)
T ss_dssp CTTCCS--SSCCCCSSHHHHHHHHTHHHHC
T ss_pred CCeeCC--CCCcccCCHHHHHHHHHHcCCC
Confidence 456777 487664 456888997764433
Done!