BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038071
(93 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80982|HSFA2_ARATH Heat stress transcription factor A-2 OS=Arabidopsis thaliana
GN=HSFA2 PE=1 SV=1
Length = 345
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 26/34 (76%)
Query: 29 PKPMEGLNEVGSPPFLRKIYEMVEDLETNPAVSW 62
P+PMEGLNE G PPFL K YEMVED T+ VSW
Sbjct: 31 PRPMEGLNETGPPPFLTKTYEMVEDPATDTVVSW 64
>sp|Q338B0|HFA2C_ORYSJ Heat stress transcription factor A-2c OS=Oryza sativa subsp.
japonica GN=HSFA2C PE=2 SV=2
Length = 358
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 7 IKEEEEEEEGVVDDELVSGGSLPKPMEGLNEVGSPPFLRKIYEMVEDLETNPAVSW 62
+KEE E + E GG+ P+PMEGL+EVG PPFL K Y++VED T+ VSW
Sbjct: 9 VKEEMLESQQQQRQE--DGGAAPRPMEGLHEVGPPPFLTKTYDLVEDPATDGVVSW 62
>sp|Q6VBB2|HFA2B_ORYSJ Heat stress transcription factor A-2b OS=Oryza sativa subsp.
japonica GN=HSFA2B PE=2 SV=1
Length = 372
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 12/78 (15%)
Query: 2 PTLATIKEEEEEEEGVVDDELVSG---------GSLPKPMEGLNEVGSPPFLRKIYEMVE 52
P L +KEEE +G E+V+G G P+PMEGL++ G PPFL K Y+MV+
Sbjct: 4 PMLNAVKEEESHGDGG-GLEVVAGEDGAAAVAAGVAPRPMEGLHDAGPPPFLTKTYDMVD 62
Query: 53 DLETNPAVSWISSATEES 70
D T+ AVSW SAT S
Sbjct: 63 DAGTDAAVSW--SATSNS 78
>sp|Q9LUH8|HFA6B_ARATH Heat stress transcription factor A-6b OS=Arabidopsis thaliana
GN=HSFA6b PE=2 SV=1
Length = 406
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 27 SLPKPMEGLNEVGSPPFLRKIYEMVEDLETNPAVSWISS 65
S P+P+EGL+E G PPFL K Y++VED TN VSW S
Sbjct: 46 SYPQPLEGLHESGPPPFLTKTYDLVEDSRTNHVVSWSKS 84
>sp|P41152|HSF30_SOLPE Heat shock factor protein HSF30 OS=Solanum peruvianum GN=HSF30
PE=2 SV=1
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 25/32 (78%)
Query: 31 PMEGLNEVGSPPFLRKIYEMVEDLETNPAVSW 62
PMEGL++VG PPFL K YEMVED T+ +SW
Sbjct: 20 PMEGLHDVGPPPFLSKTYEMVEDSSTDQVISW 51
>sp|Q84MN7|HFA2A_ORYSJ Heat stress transcription factor A-2a OS=Oryza sativa subsp.
japonica GN=HSFA2A PE=2 SV=1
Length = 376
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 28 LPKPMEGLNEVGSPPFLRKIYEMVEDLETNPAVSW 62
LP+PMEGL E G PPFL K YE+V+D T+ +SW
Sbjct: 39 LPRPMEGLGEAGPPPFLCKTYEVVDDPGTDTVISW 73
>sp|Q8H7Y6|HFA2D_ORYSJ Heat stress transcription factor A-2d OS=Oryza sativa subsp.
japonica GN=HSFA2D PE=2 SV=2
Length = 359
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 26 GSLPKPMEGLNEVGSPPFLRKIYEMVEDLETNPAVSW 62
G P+PMEGL+EVG PPFL K +++V D T+ VSW
Sbjct: 21 GEAPRPMEGLHEVGPPPFLTKTFDLVADPATDGVVSW 57
>sp|Q6F388|HFA2E_ORYSJ Heat stress transcription factor A-2e OS=Oryza sativa subsp.
japonica GN=HSFA2E PE=2 SV=1
Length = 357
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 23 VSGGSLPKPMEGLNEVGSPPFLRKIYEMVEDLETNPAVSWISSATEES 70
V+ G P+PM+GL + G PPFL K Y+MV+D T+ VSW SAT S
Sbjct: 19 VANGQPPRPMDGLADGGPPPFLTKTYDMVDDPTTDAVVSW--SATNNS 64
>sp|Q657C0|HFA6B_ORYSJ Heat stress transcription factor A-6a OS=Oryza sativa subsp.
japonica GN=HSFA6B PE=2 SV=1
Length = 402
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 23/34 (67%)
Query: 29 PKPMEGLNEVGSPPFLRKIYEMVEDLETNPAVSW 62
P+PMEGL E G PF+ K YEMV D T+ VSW
Sbjct: 80 PRPMEGLGEAGPAPFVAKTYEMVADAATDAVVSW 113
>sp|Q9M1V5|HFA7B_ARATH Heat stress transcription factor A-7b OS=Arabidopsis thaliana
GN=HSFA7B PE=2 SV=1
Length = 282
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 22/34 (64%)
Query: 29 PKPMEGLNEVGSPPFLRKIYEMVEDLETNPAVSW 62
P PMEGL E G PFL K +EMV D TN VSW
Sbjct: 15 PVPMEGLQEAGPSPFLTKTFEMVGDPNTNHIVSW 48
>sp|Q9SV12|HFA7A_ARATH Heat stress transcription factor A-7a OS=Arabidopsis thaliana
GN=HSFA7A PE=2 SV=1
Length = 272
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 32 MEGLNEVGSPPFLRKIYEMVEDLETNPAVSWISSAT 67
MEGL+E PPFL K +EMV+D T+ VSW T
Sbjct: 19 MEGLHENAPPPFLTKTFEMVDDPNTDHIVSWNRGGT 54
>sp|Q1PDN3|HFA6A_ARATH Heat stress transcription factor A-6a OS=Arabidopsis thaliana
GN=HSFA6A PE=2 SV=1
Length = 282
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 27 SLPKPMEGLNEVGSPPFLRKIYEMVEDLETNPAVSW 62
+LP P+EGL E FL K Y +VED TN VSW
Sbjct: 4 NLPIPLEGLKETPPTAFLTKTYNIVEDSSTNNIVSW 39
>sp|Q8GYY1|HSFA3_ARATH Heat stress transcription factor A-3 OS=Arabidopsis thaliana
GN=HSFA3 PE=2 SV=2
Length = 412
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 17 VVDDEL-VSGGSLPKPMEGLNEVGSPPFLRKIYEMVEDLETNPAVSW 62
VD ++ SG LP P++ L PPFL K +++V+D +P +SW
Sbjct: 29 YVDTDMGFSGSPLPMPLDILQGNPIPPFLSKTFDLVDDPTLDPVISW 75
>sp|Q7XRX3|HFB2A_ORYSJ Heat stress transcription factor B-2a OS=Oryza sativa subsp.
japonica GN=HSFB2A PE=2 SV=2
Length = 305
Score = 37.4 bits (85), Expect = 0.024, Method: Composition-based stats.
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 39 GSPPFLRKIYEMVEDLETNPAVSWISSAT 67
G+PPFL K Y MVED T+ +SW S T
Sbjct: 7 GTPPFLTKTYAMVEDPSTDETISWNDSGT 35
>sp|Q9LQM7|HFA1D_ARATH Heat stress transcription factor A-1d OS=Arabidopsis thaliana
GN=HSFA1D PE=2 SV=2
Length = 485
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 29 PKPMEGLNEVGSPPFLRKIYEMVEDLETNPAVSW 62
P+P L+ PPFL K Y+MV+D T+ VSW
Sbjct: 24 PQPAAILSSNAPPPFLSKTYDMVDDHNTDSIVSW 57
>sp|Q9LVW2|HSFA9_ARATH Heat stress transcription factor A-9 OS=Arabidopsis thaliana
GN=HSFA9 PE=2 SV=1
Length = 331
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Query: 35 LNEVGS-PPFLRKIYEMVEDLETNPAVSW 62
L+E+G PFLRK +E+V+D T+P VSW
Sbjct: 63 LHEIGLITPFLRKTFEIVDDKVTDPVVSW 91
>sp|O81821|HFA1B_ARATH Heat stress transcription factor A-1b OS=Arabidopsis thaliana
GN=HSFA1B PE=2 SV=2
Length = 481
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
Query: 27 SLPKPMEGLNEVGSPPFLRKIYEMVEDLETNPAVSWIS 64
S+P P+ + PPFL K Y+MV+D TN VSW S
Sbjct: 17 SIPPPVNSV-----PPFLSKTYDMVDDPLTNEVVSWSS 49
>sp|Q94J16|HFA4B_ORYSJ Heat stress transcription factor A-4b OS=Oryza sativa subsp.
japonica GN=HSFA4B PE=2 SV=1
Length = 440
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 41 PPFLRKIYEMVEDLETNPAVSWISSAT 67
PPFL K YEMV+D T+ V W + T
Sbjct: 11 PPFLSKTYEMVDDPSTDAVVGWTPAGT 37
>sp|Q84T61|HSFA1_ORYSJ Heat stress transcription factor A-1 OS=Oryza sativa subsp.
japonica GN=HSFA1 PE=2 SV=1
Length = 506
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 41 PPFLRKIYEMVEDLETNPAVSW 62
PPFL K YEMV+D T+ VSW
Sbjct: 36 PPFLMKTYEMVDDPATDAVVSW 57
>sp|P41151|HFA1A_ARATH Heat stress transcription factor A-1a OS=Arabidopsis thaliana
GN=HSFA1A PE=1 SV=2
Length = 495
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 29 PKPMEGLNEVG-SPPFLRKIYEMVEDLETNPAVSW 62
P P LN PPFL K Y+MVED T+ VSW
Sbjct: 38 PHPATLLNANSLPPPFLSKTYDMVEDPATDAIVSW 72
>sp|Q9S7U5|HSFA8_ARATH Heat stress transcription factor A-8 OS=Arabidopsis thaliana
GN=HSFA8 PE=2 SV=1
Length = 374
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 42 PFLRKIYEMVEDLETNPAVSWISSA 66
PFLRK Y+MV+D T+ +SW SA
Sbjct: 19 PFLRKCYDMVDDSTTDSIISWSPSA 43
>sp|Q9SCW5|HFA1E_ARATH Heat stress transcription factor A-1e OS=Arabidopsis thaliana
GN=HSFA1E PE=2 SV=2
Length = 468
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 41 PPFLRKIYEMVEDLETNPAVSWIS 64
PPFL K Y+MV+D T+ VSW S
Sbjct: 22 PPFLSKTYDMVDDPLTDDVVSWSS 45
>sp|Q93VB5|HFA4D_ORYSJ Heat stress transcription factor A-4d OS=Oryza sativa subsp.
japonica GN=HSFA4D PE=1 SV=1
Length = 459
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 14/20 (70%), Positives = 14/20 (70%)
Query: 43 FLRKIYEMVEDLETNPAVSW 62
FL K YEMVED TN VSW
Sbjct: 21 FLIKTYEMVEDAATNHVVSW 40
>sp|Q6K6S5|HSFA5_ORYSJ Heat stress transcription factor A-5 OS=Oryza sativa subsp.
japonica GN=HSFA5 PE=2 SV=1
Length = 475
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 42 PFLRKIYEMVEDLETNPAVSWISSATEES 70
PFL K YEMV+D T+ VSW S A++ S
Sbjct: 21 PFLLKTYEMVDDPSTDAVVSW-SDASDAS 48
>sp|Q10PR4|HSFA9_ORYSJ Heat stress transcription factor A-9 OS=Oryza sativa subsp.
japonica GN=HSFA9 PE=2 SV=1
Length = 410
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 6/40 (15%)
Query: 23 VSGGSLPKPMEGLNEVGSPPFLRKIYEMVEDLETNPAVSW 62
+G +PKP E PFL K+Y+MV D T+ +SW
Sbjct: 37 ANGPVVPKPSE------VAPFLTKVYDMVSDPATDNVISW 70
>sp|Q5Z6A4|HFA6A_ORYSJ Putative heat stress transcription factor A-6a OS=Oryza sativa
subsp. japonica GN=HSFA6A PE=3 SV=1
Length = 331
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 42 PFLRKIYEMVEDLETNPAVSWISSA 66
PFL K +EMVED T+ VSW +A
Sbjct: 43 PFLVKTFEMVEDPATDAVVSWGGAA 67
>sp|B6YRL9|PYRDB_AZOPC Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit
OS=Azobacteroides pseudotrichonymphae genomovar. CFP2
GN=pyrD PE=3 SV=1
Length = 302
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 34 GLNEVGSPPFLRKIYEMVEDLETNPAVSWISSATEESRQSDSKRINS-KEIRSCPLQIWC 92
GL G F++ IY V+++ETN V+ IS +T E S +++IN +I + L I C
Sbjct: 72 GLQNRGVTYFIKNIYPKVKNIETNIMVN-ISGSTIEDCVSCAEKINELDKIPAIELNISC 130
>sp|O22230|HSFB3_ARATH Heat stress transcription factor B-3 OS=Arabidopsis thaliana
GN=HSFB3 PE=2 SV=1
Length = 244
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 41 PPFLRKIYEMVEDLETNPAVSWISSAT 67
PPFL K Y++VED T+ +SW T
Sbjct: 39 PPFLVKTYKVVEDPTTDGVISWNEYGT 65
>sp|Q9C635|HSFB4_ARATH Heat stress transcription factor B-4 OS=Arabidopsis thaliana
GN=HSFB4 PE=2 SV=1
Length = 348
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 32 MEGLNEVGSPPFLRKIYEMVEDLETNPAVSW 62
+EG + PFL K Y++V+D T+ VSW
Sbjct: 24 VEGQGKAVPAPFLTKTYQLVDDPATDHVVSW 54
>sp|P22335|HSF24_SOLPE Heat shock factor protein HSF24 OS=Solanum peruvianum GN=HSF24
PE=2 SV=1
Length = 301
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 42 PFLRKIYEMVEDLETNPAVSW 62
PFL K Y++V+D T+ +SW
Sbjct: 9 PFLLKTYQLVDDAATDDVISW 29
>sp|Q99MU3|DSRAD_MOUSE Double-stranded RNA-specific adenosine deaminase OS=Mus musculus
GN=Adar PE=1 SV=2
Length = 1178
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 6 TIKEEEEEEEGVVDDELVSGGSLPKPMEGLNEVGSPPFLRKIYEMVEDLETNPAVSWISS 65
+K +EE DD+ SGG+ + L+E +P +R+I E+V L TNP +
Sbjct: 629 AMKALQEEAASSADDQ--SGGA---NTDSLDESMAPNKIRRIGELVRYLNTNPVGGLLEY 683
Query: 66 ATEESRQSDSKRIN 79
A ++ K I+
Sbjct: 684 ARSHGFAAEFKLID 697
>sp|P55266|DSRAD_RAT Double-stranded RNA-specific adenosine deaminase OS=Rattus
norvegicus GN=Adar PE=2 SV=1
Length = 1175
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 6 TIKEEEEEEEGVVDDELVSGGSLPKPMEGLNEVGSPPFLRKIYEMVEDLETNPAVSWISS 65
+K +EE DD+ SGG+ + L+E +P +R+I E+V L TNP +
Sbjct: 626 AMKALQEEAANSADDQ--SGGA---NTDSLDESVAPNKIRRIGELVRYLNTNPVGGLLEY 680
Query: 66 ATEESRQSDSKRIN 79
A ++ K I+
Sbjct: 681 ARSHGFAAEFKLID 694
>sp|Q6H6Q7|HSFA3_ORYSJ Heat stress transcription factor A-3 OS=Oryza sativa subsp.
japonica GN=HSFA3 PE=2 SV=1
Length = 498
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 29 PKPMEGLNEVGS-PPFLRKIYEMVEDLETNPAVSW 62
P+P+E L + PPFL K Y++V + E + +SW
Sbjct: 53 PRPLEALLQGPQLPPFLSKTYDLVCEPELDGVISW 87
>sp|A1DGZ7|DBP2_NEOFI ATP-dependent RNA helicase dbp2 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp2
PE=3 SV=1
Length = 545
Score = 29.3 bits (64), Expect = 7.0, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 2 PTLATIKEEEEEEEGVVDDELVSGGSLPKPMEGLNEVGSPPFL 44
P +A E E EE + V G ++P+P+E +E G P ++
Sbjct: 88 PDVAARSEREVEEFRKKHEMTVQGRNVPRPVENFDEAGFPQYV 130
>sp|Q4X195|DBP2_ASPFU ATP-dependent RNA helicase dbp2 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=dbp2
PE=3 SV=2
Length = 547
Score = 29.3 bits (64), Expect = 7.1, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 2 PTLATIKEEEEEEEGVVDDELVSGGSLPKPMEGLNEVGSPPFL 44
P +A E E EE + V G ++P+P+E +E G P ++
Sbjct: 90 PDVAARSEREVEEFRKKHEMTVQGRNVPRPVENFDEAGFPQYV 132
>sp|P38165|RTG3_YEAST Retrograde regulation protein 3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RTG3 PE=1 SV=2
Length = 486
Score = 29.3 bits (64), Expect = 7.2, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 2 PTLATIKEEEEEEEGVVDDEL-VSGGSLPKPMEGLNEVGSPPFLRKIYEMVEDLETNPAV 60
PT +TI EE E + +DD S G P ++ +G P LR Y M D + A+
Sbjct: 90 PTASTIYEEAESQSSYLDDMFRTSQGGRPVTQNSISSIGQGP-LRSSYSMAYDSPVDRAM 148
Query: 61 S 61
+
Sbjct: 149 N 149
>sp|Q96320|HSFB1_ARATH Heat stress transcription factor B-1 OS=Arabidopsis thaliana
GN=HSFB1 PE=2 SV=2
Length = 284
Score = 29.3 bits (64), Expect = 8.1, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 42 PFLRKIYEMVEDLETNPAVSWISSAT 67
PFL K Y++V+D T+ VSW T
Sbjct: 14 PFLSKTYQLVDDHSTDDVVSWNEEGT 39
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.308 0.128 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,577,081
Number of Sequences: 539616
Number of extensions: 1476000
Number of successful extensions: 5759
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 5688
Number of HSP's gapped (non-prelim): 87
length of query: 93
length of database: 191,569,459
effective HSP length: 63
effective length of query: 30
effective length of database: 157,573,651
effective search space: 4727209530
effective search space used: 4727209530
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 55 (25.8 bits)