Citrus Sinensis ID: 038072

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------
Protein Sequence
MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLNVTGVGEGQVADISC
Secondary Structure (PSIPRED)
cccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccccEEEcccccccccEEEEEcccccccccccEEEEEEccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccEEEEccccccEEEEEccccccEcEEEccccccccHccccEEEEEccccEEEEEcc
Coil and Loop (DISEMBL)
massgvnfynhsKKSAKILLEHEVRRYTRDILRGLDhihshgvahcgikldnillvpgkdagFMAKIVARGdkclherhgllnvtgvgegqvadisc
Flexible Loop (DISEMBL)
massgvnfynhskksakILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGllnvtgvgegqvadisc
Low Complexity Region (SEG)
MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLNVTGVGEGQVADISC
Disordered region (IsUnstruct)
**************SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLNVTGVGE********
Disordered Region (DISOPRED)
*ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLN**GVGEG**A*I**
Disordered Region (DISEMBL)
********YNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLNVTGVGEGQVADISC
Disordered Region (DISPRO)
******NFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLNVTGVGEGQVADISC
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLNVTGVGEGQVADISC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	97	2.2.26 [Sep-21-2011]
Q4P5N0	746	Serine/threonine-protein	N/A	no	0.546	0.071	0.396	5e-05
Q6CXN5	772	Probable serine/threonine	yes	no	0.474	0.059	0.413	6e-05
Q7RZD3	954	Serine/threonine-protein	N/A	no	0.515	0.052	0.454	0.0001
Q9ESG9	490	Membrane-associated tyros	yes	no	0.793	0.157	0.354	0.0001
A2AAJ9	8891	Obscurin OS=Mus musculus	no	no	0.515	0.005	0.403	0.0004
A7TGR2	758	Probable serine/threonine	N/A	no	0.690	0.088	0.323	0.0004
Q5XHI9	691	Hormonally up-regulated n	N/A	no	0.463	0.065	0.4	0.0005
Q75DK7	970	Serine/threonine-protein	yes	no	0.515	0.051	0.454	0.0005
Q9P2K8	1649	Eukaryotic translation in	yes	no	0.525	0.030	0.403	0.0005
Q6VZ17	626	Hormonally up-regulated n	N/A	no	0.463	0.071	0.4	0.0005

>sp|Q4P5N0|STE20_USTMA Serine/threonine-protein kinase SMU1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=SMU1 PE=3 SV=1

 Score = 46.2 bits (108), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 5/58 (8%)

Query: 15  SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL-----VPGKDAGFMAKI 67
           +  I+ E ++   +R++L GL H+H HGV H  IK DN+LL     +   D GF A+I
Sbjct: 559 TCNIMTEGQIAAVSREVLEGLRHLHQHGVIHRDIKSDNVLLSLQGDIKLTDFGFCAQI 616

MAP4K component of the MAPK pathway required for the mating pheromone response and the regulation of cell polarity and cell cycle. Phosphorylates histone H2B to form H2BS10ph.
Ustilago maydis (strain 521 / FGSC 9021) (taxid: 237631)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q6CXN5|HAL5_KLULA Probable serine/threonine-protein kinase HAL5-like OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=KLLA0A06820g PE=3 SV=1

 Score = 46.2 bits (108), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/46 (41%), Positives = 30/46 (65%)

Query: 12  SKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVP 57
           S KS  +L   E   + + +L G+ ++H+HGVAHC IK +N+L +P
Sbjct: 574 SSKSDSVLHPLEADCFMKQLLHGIQYMHAHGVAHCDIKPENLLFLP 619

Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q7RZD3|STE20_NEUCR Serine/threonine-protein kinase ste-20 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ste-20 PE=3 SV=1

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 5/55 (9%)

Query: 18  ILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL-----VPGKDAGFMAKI 67
           I+ E ++    R+ LRGL H+HS GV H  IK DNILL     +   D GF A I
Sbjct: 764 IMTEGQIASVCRETLRGLQHLHSKGVIHRDIKSDNILLSMEGNIKLTDFGFCATI 818

MAP4K component of the MAPK pathway required for the mating pheromone response and the regulation of cell polarity and cell cycle. Phosphorylates histone H2B to form H2BS10ph.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ESG9|PMYT1_MOUSE Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase OS=Mus musculus GN=Pkmyt1 PE=2 SV=3

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/93 (35%), Positives = 40/93 (43%), Gaps = 16/93 (17%)

Query: 5   GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFM 64
           G +   H +     L E +V  Y RDIL  LDH+HS G+ H  +K  NI L P       
Sbjct: 182 GPSLQQHCEAWGASLPEAQVWGYLRDILLALDHLHSQGLVHLDVKPANIFLGP------- 234

Query: 65  AKIVARGDKCLHERHGL---LNVTGVGEGQVAD 94
                RG +C     GL   L   G GE Q  D
Sbjct: 235 -----RG-RCKLGDFGLLVELGSAGAGEAQEGD 261

Acts as a negative regulator of entry into mitosis (G2 to M transition) by phosphorylation of the CDK1 kinase specifically when CDK1 is complexed to cyclins. Mediates phosphorylation of CDK1 predominantly on 'Thr-14'. Also involved in Golgi fragmentation. May be involved in phosphorylation of CDK1 on 'Tyr-15' to a lesser degree, however tyrosine kinase activity is unclear and may be indirect. May be a downstream target of Notch signaling pathway during eye development.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A2AAJ9|OBSCN_MOUSE Obscurin OS=Mus musculus GN=Obscn PE=2 SV=2

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 7/57 (12%)

Query: 18   ILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLV-PGK------DAGFMAKI 67
            ++ E EV+ Y + ++ GL ++HSHG+ H  IK  NIL+V P +      D GF  KI
Sbjct: 7505 VVTEAEVKVYIQQLVEGLHYLHSHGILHLDIKPPNILMVHPAREDIKICDFGFAQKI 7561

Involved in myofibrillogenesis. Seems to be involved in assembly of myosin into sarcomeric A bands in striated muscle.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A7TGR2|HAL5_VANPO Probable serine/threonine-protein kinase HAL5-like OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=Kpol_2001p30 PE=3 SV=1

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 4/71 (5%)

Query: 7   NFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAK 66
           N      K+   L   E   + + +L G+ ++HSHGVAHC +K +NIL  P      + K
Sbjct: 555 NILTRKTKNGTALHPLEADCFMKQLLTGVQYMHSHGVAHCDLKPENILFHPNG----LLK 610

Query: 67  IVARGDKCLHE 77
           I   G  C+ +
Sbjct: 611 ICDFGTSCVFQ 621

Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) (taxid: 436907)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q5XHI9|HUNKA_XENLA Hormonally up-regulated neu tumor-associated kinase homolog A OS=Xenopus laevis GN=hunk-a PE=2 SV=1

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/45 (40%), Positives = 28/45 (62%)

Query: 11  HSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           H     K L EHE R+Y R ++  ++H+H  GV H  +K++N+LL
Sbjct: 143 HKIYEKKRLEEHEARKYIRQLILAVEHLHRAGVVHRDLKIENLLL 187

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q75DK7|STE20_ASHGO Serine/threonine-protein kinase STE20 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=STE20 PE=3 SV=2

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 5/55 (9%)

Query: 18  ILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL-----VPGKDAGFMAKI 67
           IL E ++   +R+ LRGL  +HS GV H  IK DNILL     +   D GF A+I
Sbjct: 773 ILTEGQIAAVSRETLRGLHFLHSKGVIHRDIKSDNILLSMDGNIKLTDFGFCAQI 827

MAP4K component of the MAPK pathway required for the mating pheromone response and the regulation of cell polarity and cell cycle. Phosphorylates histone H2B to form H2BS10ph.

Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9P2K8|E2AK4_HUMAN Eukaryotic translation initiation factor 2-alpha kinase 4 OS=Homo sapiens GN=EIF2AK4 PE=1 SV=3

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)

Query: 4   SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           SGV+   H   S  I + H++RRYT  +L GLD++HS+ V H  +   N+L+
Sbjct: 383 SGVSLAAHLSHSGPIPV-HQLRRYTAQLLSGLDYLHSNSVVHKVLSASNVLV 433

Can phosphorylate the alpha subunit of EIF2 and may mediate translational control.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q6VZ17|HUNKB_XENLA Hormonally up-regulated neu tumor-associated kinase homolog B (Fragment) OS=Xenopus laevis GN=hunk-b PE=2 SV=1

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/45 (40%), Positives = 28/45 (62%)

Query: 11  HSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           H     K L EHE R+Y R ++  ++H+H  GV H  +K++N+LL
Sbjct: 76  HKIYEKKRLEEHEARKYIRQLILAVEHLHRAGVVHRDLKIENLLL 120

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	97
147834028	456	hypothetical protein VITISV_023637 [Viti	0.505	0.107	0.673	2e-09
225437961	350	PREDICTED: mitogen-activated protein kin	0.505	0.14	0.673	4e-09
359480078	360	PREDICTED: mitogen-activated protein kin	0.505	0.136	0.653	1e-08
296082411	369	unnamed protein product [Vitis vinifera]	0.505	0.132	0.571	2e-08
225438736	353	PREDICTED: mitogen-activated protein kin	0.505	0.138	0.571	2e-08
224091835	271	predicted protein [Populus trichocarpa]	0.690	0.247	0.442	8e-08
225437914	345	PREDICTED: mitogen-activated protein kin	0.505	0.142	0.591	8e-08
359486285	294	PREDICTED: mitogen-activated protein kin	0.546	0.180	0.528	9e-08
297802234	787	hypothetical protein ARALYDRAFT_328051 [	0.546	0.067	0.490	3e-07
4006878	799	MAP3K-like protein kinase [Arabidopsis t	0.546	0.066	0.490	5e-07

>gi|147834028|emb|CAN71000.1| hypothetical protein VITISV_023637 [Vitis vinifera]

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/49 (67%), Positives = 36/49 (73%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKI 67
           L E+EVR YTRDI+RGL +IH HG  HC IK DNILLVP    GF AKI
Sbjct: 269 LPENEVRCYTRDIVRGLCYIHGHGYVHCDIKPDNILLVPTCCNGFRAKI 317

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225437961|ref|XP_002269638.1| PREDICTED: mitogen-activated protein kinase kinase kinase ANP1-like [Vitis vinifera]

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/49 (67%), Positives = 36/49 (73%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKI 67
           L E+EVR YTRDI+RGL +IH HG  HC IK DNILLVP    GF AKI
Sbjct: 163 LPENEVRCYTRDIVRGLCYIHGHGYVHCDIKPDNILLVPTCCNGFRAKI 211

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359480078|ref|XP_003632394.1| PREDICTED: mitogen-activated protein kinase kinase kinase ANP1-like [Vitis vinifera]

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/49 (65%), Positives = 35/49 (71%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKI 67
           L E+EVR YTRDI+RGL +IH HG  HC IK DNILL P    GF AKI
Sbjct: 158 LPENEVRCYTRDIVRGLCYIHGHGYVHCDIKPDNILLAPTCCNGFRAKI 206

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082411|emb|CBI21416.3| unnamed protein product [Vitis vinifera]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/49 (57%), Positives = 35/49 (71%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKI 67
           L+E +V+RYTR ILRGLD+IH  G  HC +KL N+LL    D+ F AKI
Sbjct: 101 LVESDVKRYTRSILRGLDYIHGVGFVHCDVKLQNLLLCSSNDSVFCAKI 149

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225438736|ref|XP_002282686.1| PREDICTED: mitogen-activated protein kinase kinase kinase 2 [Vitis vinifera]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/49 (57%), Positives = 35/49 (71%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKI 67
           L+E +V+RYTR ILRGLD+IH  G  HC +KL N+LL    D+ F AKI
Sbjct: 101 LVESDVKRYTRSILRGLDYIHGVGFVHCDVKLQNLLLCSSNDSVFCAKI 149

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224091835|ref|XP_002309365.1| predicted protein [Populus trichocarpa] gi|222855341|gb|EEE92888.1| predicted protein [Populus trichocarpa]

 Score = 61.2 bits (147), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 3/70 (4%)

Query: 5   GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPG---KDA 61
           G + +   K S   L E +VR+YTRD+++GL ++H  G  HC +K  NILLVPG   +  
Sbjct: 91  GRSLHRQIKLSGSGLPESDVRKYTRDVVKGLKYVHCRGYIHCDVKPGNILLVPGTEERSG 150

Query: 62  GFMAKIVARG 71
           GF+AKI   G
Sbjct: 151 GFVAKIADFG 160

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225437914|ref|XP_002267830.1| PREDICTED: mitogen-activated protein kinase kinase kinase ANP1-like [Vitis vinifera]

 Score = 61.2 bits (147), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/49 (59%), Positives = 34/49 (69%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKI 67
           L E E+R YTRDI+RGL ++H HG  HC IK +NILLVP    G  AKI
Sbjct: 153 LPEKEMRSYTRDIVRGLCYVHGHGYTHCDIKPENILLVPTSCNGLRAKI 201

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359486285|ref|XP_002266649.2| PREDICTED: mitogen-activated protein kinase kinase kinase A-like [Vitis vinifera]

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/53 (52%), Positives = 34/53 (64%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARG 71
           L E EVR Y R I RGL H+H  G+ HC +K DN+L+ PGKD G + KI   G
Sbjct: 101 LSEPEVRHYARMIARGLCHMHERGLTHCDLKPDNVLVFPGKDGGNVVKIADFG 153

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802234|ref|XP_002869001.1| hypothetical protein ARALYDRAFT_328051 [Arabidopsis lyrata subsp. lyrata] gi|297314837|gb|EFH45260.1| hypothetical protein ARALYDRAFT_328051 [Arabidopsis lyrata subsp. lyrata]

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/53 (49%), Positives = 38/53 (71%)

Query: 3   SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           +SG N  +  K S + L E EVRR+TR I++GL HIH +G +HC +KL+N+L+
Sbjct: 87  ASGGNLADRIKNSGEALPECEVRRFTRSIVKGLCHIHGNGYSHCDLKLENVLV 139

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4006878|emb|CAB16796.1| MAP3K-like protein kinase [Arabidopsis thaliana] gi|7270644|emb|CAB80361.1| MAP3K-like protein kinase [Arabidopsis thaliana]

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/53 (49%), Positives = 37/53 (69%)

Query: 3   SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           +SG +  +  K S + L E EVRR+TR I++GL HIH +G  HC IKL+N+L+
Sbjct: 87  ASGGSLADRIKSSGEALPEFEVRRFTRSIVKGLCHIHGNGFTHCDIKLENVLV 139

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	97
TAIR|locus:2114990	336	MAPKKK21 "mitogen-activated pr	0.546	0.157	0.490	1e-08
TAIR|locus:2116417	444	MAPKKK16 "mitogen-activated pr	0.536	0.117	0.442	8.9e-08
TAIR|locus:2060246	372	MAPKKK17 "mitogen-activated pr	0.360	0.094	0.514	3.7e-07
TAIR|locus:2074835	342	MAPKKK20 "mitogen-activated pr	0.546	0.154	0.527	7.6e-07
TAIR|locus:2177018	369	AT5G12090 [Arabidopsis thalian	0.391	0.102	0.5	7.7e-07
TAIR|locus:2155568	344	MAPKKK19 "mitogen-activated pr	0.546	0.154	0.509	9.9e-07
TAIR|locus:2161690	448	MAPKKK15 "mitogen-activated pr	0.752	0.162	0.367	2.6e-06
TAIR|locus:2205523	339	MAPKKK18 "mitogen-activated pr	0.432	0.123	0.488	3.3e-06
TAIR|locus:2102684	376	AT3G45790 [Arabidopsis thalian	0.659	0.170	0.397	4.1e-06
TAIR|locus:2046278	213	AT2G18530 [Arabidopsis thalian	0.701	0.319	0.383	5.2e-06

TAIR|locus:2114990 MAPKKK21 "mitogen-activated protein kinase kinase kinase 21" [Arabidopsis thaliana (taxid:3702)]

 Score = 137 (53.3 bits), Expect = 1.0e-08, P = 1.0e-08
 Identities = 26/53 (49%), Positives = 37/53 (69%)

Query:     3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
             +SG +  +  K S + L E EVRR+TR I++GL HIH +G  HC IKL+N+L+
Sbjct:    87 ASGGSLADRIKSSGEALPEFEVRRFTRSIVKGLCHIHGNGFTHCDIKLENVLV 139

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2116417 MAPKKK16 "mitogen-activated protein kinase kinase kinase 16" [Arabidopsis thaliana (taxid:3702)]

 Score = 118 (46.6 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
 Identities = 23/52 (44%), Positives = 32/52 (61%)

Query:     4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
             SG N ++  K S   L E E+R YTR IL GL ++H  G+ HC +K  N+L+
Sbjct:    83 SGGNLHDLIKNSGGKLPEPEIRSYTRQILNGLVYLHERGIVHCDLKSHNVLV 134

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2060246 MAPKKK17 "mitogen-activated protein kinase kinase kinase 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 109 (43.4 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
 Identities = 18/35 (51%), Positives = 27/35 (77%)

Query:    21 EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
             E  V +YTRDIL+GL++IHS G+ HC +K  N+++
Sbjct:   100 ETRVVKYTRDILKGLEYIHSKGIVHCDVKGSNVVI 134

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2074835 MAPKKK20 "mitogen-activated protein kinase kinase kinase 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 7.6e-07, P = 7.6e-07
 Identities = 29/55 (52%), Positives = 36/55 (65%)

Query:     2 ASSGVNFYNHSKK-SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
             AS G +  ++ KK   + L E  VRR+T  +LRGL HIH+ G AHC IKL NILL
Sbjct:    86 ASRG-SLASYMKKLGGEGLPESTVRRHTGSVLRGLRHIHAKGFAHCDIKLANILL 139

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;IMP

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0048235 "pollen sperm cell differentiation" evidence=IEP

GO:0000302 "response to reactive oxygen species" evidence=IEP

GO:0009409 "response to cold" evidence=IEP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0009651 "response to salt stress" evidence=IMP

TAIR|locus:2177018 AT5G12090 [Arabidopsis thaliana (taxid:3702)]

 Score = 105 (42.0 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
 Identities = 19/38 (50%), Positives = 26/38 (68%)

Query:    24 VRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDA 61
             +R +TR IL GL  +HSHG  HC +K DN+L+   KD+
Sbjct:   137 IRDFTRMILEGLVSMHSHGYVHCDLKSDNLLIFSRKDS 174

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2155568 MAPKKK19 "mitogen-activated protein kinase kinase kinase 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 119 (46.9 bits), Expect = 9.9e-07, P = 9.9e-07
 Identities = 28/55 (50%), Positives = 38/55 (69%)

Query:     2 ASSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
             AS G +  ++ KK A + + E  VRR+T  +LRGL HIH++G AHC +KL NILL
Sbjct:    88 ASRG-SLESYLKKLAGEGVPESTVRRHTGSVLRGLRHIHANGFAHCDLKLGNILL 141

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2161690 MAPKKK15 "mitogen-activated protein kinase kinase kinase 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 117 (46.2 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 29/79 (36%), Positives = 43/79 (54%)

Query:     4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGF 63
             SG + ++  K S   L E  +R YTR IL+GL ++H  G+ HC +K  N+++      G 
Sbjct:    84 SGGSLHDLIKNSGGKLPEPLIRSYTRQILKGLMYLHDQGIVHCDVKSQNVMI-----GGE 138

Query:    64 MAKIVARG-DKCLHERHGL 81
             +AKIV  G  K + E   L
Sbjct:   139 IAKIVDLGCAKTVEENENL 157

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2205523 MAPKKK18 "mitogen-activated protein kinase kinase kinase 18" [Arabidopsis thaliana (taxid:3702)]

 Score = 99 (39.9 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
 Identities = 21/43 (48%), Positives = 29/43 (67%)

Query:    14 KSAKILLEHEVRRYTRDILRGLDHIH-SHGVAHCGIKLDNILL 55
             K+   + E  V +YTR IL GL++IH S G+AHC IK  N+L+
Sbjct:    97 KNGGFIDEARVVKYTRQILLGLEYIHNSKGIAHCDIKGSNVLV 139

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2102684 AT3G45790 [Arabidopsis thaliana (taxid:3702)]

 Score = 114 (45.2 bits), Expect = 4.1e-06, P = 4.1e-06
 Identities = 27/68 (39%), Positives = 40/68 (58%)

Query:     4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDA-- 61
             SG + ++    +   L E +V+   RDIL GLD+IH   + HC IK +NILL P ++   
Sbjct:   182 SGKSLFDLVNSNLGGLSEKDVKLLARDILYGLDYIHRANIIHCDIKPENILLAPVENRIR 241

Query:    62 --GFMAKI 67
               G++AKI
Sbjct:   242 PNGYVAKI 249

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2046278 AT2G18530 [Arabidopsis thaliana (taxid:3702)]

 Score = 108 (43.1 bits), Expect = 5.2e-06, P = 5.2e-06
 Identities = 28/73 (38%), Positives = 37/73 (50%)

Query:     4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVP-----G 58
             SG N   H +++   L + +VR +  +IL GL +IH   + HC IK  NI LV      G
Sbjct:    34 SGRNLAKHIERNGGKLPKDDVRSFANEILLGLKYIHEEKIIHCDIKPKNISLVYENNRFG 93

Query:    59 KDAGFMAKIVARG 71
                GF AKI   G
Sbjct:    94 SVGGFSAKIAGFG 106

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	97
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	5e-15
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-11
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	3e-11
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	7e-10
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-08
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	3e-08
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-07
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	3e-07
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	4e-07
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	6e-07
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-06
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-06
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	3e-06
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	4e-06
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	5e-06
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	7e-06
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-05
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-05
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	5e-05
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	5e-05
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	8e-05
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	1e-04
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	1e-04
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	1e-04
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-04
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	2e-04
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	2e-04
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-04
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-04
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-04
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-04
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	3e-04
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	3e-04
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	3e-04
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	3e-04
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	4e-04
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	4e-04
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	4e-04
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	4e-04
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	4e-04
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	6e-04
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	6e-04
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	6e-04
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	8e-04
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	0.001
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	0.001
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	0.001
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	0.001
PHA02882	294	PHA02882, PHA02882, putative serine/threonine kina	0.002
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	0.002
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	0.002
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	0.002
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	0.002
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	0.002
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	0.002
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	0.003
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	0.003
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	0.003
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	0.003
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	0.004
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	0.004

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 67.2 bits (165), Expect = 5e-15
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 4/55 (7%)

Query: 14  KSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV 68
           K    L E  +R+YTR IL GL ++HS+G+ H  IK  NIL+    D+  + K+ 
Sbjct: 93  KKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILV----DSDGVVKLA 143

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 57.6 bits (140), Expect = 1e-11
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 4   SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGF 63
            G +  +  K++   L E E+ R    IL GL+++HS+G+ H  +K +NILL        
Sbjct: 74  EGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILL---DSDNG 130

Query: 64  MAKI 67
             K+
Sbjct: 131 KVKL 134

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 19/42 (45%), Positives = 25/42 (59%)

Query: 14  KSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           K    L E E R Y R IL  L+++HS G+ H  +K +NILL
Sbjct: 89  KKRGRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPENILL 130

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 53.0 bits (128), Expect = 7e-10
 Identities = 17/40 (42%), Positives = 26/40 (65%)

Query: 17  KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLV 56
             L E E ++    ILRGL+++HS+G+ H  +K +NILL 
Sbjct: 93  GPLSEDEAKKIALQILRGLEYLHSNGIIHRDLKPENILLD 132

Length = 260

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 50.0 bits (120), Expect = 1e-08
 Identities = 20/39 (51%), Positives = 26/39 (66%)

Query: 17  KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           +IL EH +R YT  +L GL ++HSHG+ H  IK  NI L
Sbjct: 94  RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFL 132

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 48.8 bits (117), Expect = 3e-08
 Identities = 19/49 (38%), Positives = 28/49 (57%)

Query: 7   NFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           N Y   K   + L E  V+ Y   +L+ LDH+H +G+ H  IK +NIL+
Sbjct: 85  NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILI 133

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 5/62 (8%)

Query: 17  KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL-----VPGKDAGFMAKIVARG 71
             + E ++    R++L+GL+++HS  V H  IK DNILL     V   D GF A++    
Sbjct: 111 VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK 170

Query: 72  DK 73
            K
Sbjct: 171 SK 172

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 46.0 bits (110), Expect = 3e-07
 Identities = 13/42 (30%), Positives = 22/42 (52%)

Query: 14  KSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
                  E   R Y  +I+  L+++HS G+ +  +K +NILL
Sbjct: 85  SKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILL 126

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 45.9 bits (107), Expect = 4e-07
 Identities = 16/47 (34%), Positives = 21/47 (44%)

Query: 9   YNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
                     L E E       IL  L+++HS G+ H  IK +NILL
Sbjct: 88  LLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILL 134

Length = 384

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 45.2 bits (108), Expect = 6e-07
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 13  KKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
            K    L  + ++     +LRGL + HSH + H  +K  NIL+
Sbjct: 89  DKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILI 131

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 43.9 bits (104), Expect = 2e-06
 Identities = 16/49 (32%), Positives = 27/49 (55%)

Query: 7   NFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           + Y   K   + L E  ++ Y   +L+GL   HSHG+ H  +K +N+L+
Sbjct: 83  DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLI 131

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 15/35 (42%), Positives = 19/35 (54%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           E  V  Y   +L+GL ++H  GV H  IK  NIL 
Sbjct: 98  ESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILT 132

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 7   NFYNHSKKSAKILL-EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLV 56
           N Y   K        E  +R     IL+GL HIH HG  H  +K +N+L+ 
Sbjct: 83  NLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVS 133

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 42.6 bits (101), Expect = 4e-06
 Identities = 14/35 (40%), Positives = 23/35 (65%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           E   R Y  +I+  L+++HS+G+ H  +K DNIL+
Sbjct: 92  EDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILI 126

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 42.4 bits (100), Expect = 5e-06
 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 5/61 (8%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGK-----DAGFMAKIVARGDK 73
           L E  VR+Y   ILRG++  HSH + H  IK +NIL+         D GF   + A G+ 
Sbjct: 97  LDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV 156

Query: 74  C 74
            
Sbjct: 157 Y 157

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 42.2 bits (100), Expect = 7e-06
 Identities = 15/35 (42%), Positives = 22/35 (62%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           E   R Y  +IL  L+++HS G+ H  +K +NILL
Sbjct: 101 EKCTRFYAAEILLALEYLHSKGIIHRDLKPENILL 135

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 16/44 (36%), Positives = 29/44 (65%)

Query: 12  SKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
            K + + L E ++    +++L+GL+++HS+G+ H  IK  NILL
Sbjct: 88  LKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILL 131

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 40.5 bits (95), Expect = 2e-05
 Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPG---KDAGF-MAKIV 68
             E  +R YTR IL GL+++H     H  IK  NIL+      K A F MAK V
Sbjct: 99  FPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQV 152

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 39.6 bits (93), Expect = 5e-05
 Identities = 13/45 (28%), Positives = 28/45 (62%)

Query: 13  KKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVP 57
           +   + L E +V+ Y R +L+G+ ++H++G+ H  +K  N+L+  
Sbjct: 90  RDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISA 134

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 39.6 bits (92), Expect = 5e-05
 Identities = 19/41 (46%), Positives = 27/41 (65%)

Query: 14  KSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNIL 54
           K+   L E+  RRYTR IL+G+ ++HS+ + H  IK  NIL
Sbjct: 98  KAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANIL 138

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 39.4 bits (92), Expect = 8e-05
 Identities = 18/35 (51%), Positives = 24/35 (68%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           E EVR Y  +I+  LDH+H  G+ +  IKL+NILL
Sbjct: 104 ESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILL 138

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 38.9 bits (90), Expect = 1e-04
 Identities = 19/41 (46%), Positives = 26/41 (63%)

Query: 14  KSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNIL 54
           KS   L E+  R+YTR IL G+ ++HS+ + H  IK  NIL
Sbjct: 98  KSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANIL 138

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 38.7 bits (90), Expect = 1e-04
 Identities = 15/39 (38%), Positives = 26/39 (66%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVP 57
           L E    +YT+ IL G+ ++H++ V H  IK +N++L+P
Sbjct: 99  LPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMP 137

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 38.6 bits (90), Expect = 1e-04
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNIL 54
           L E   R+YTR IL G++++HS+ + H  IK  NIL
Sbjct: 101 LTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANIL 136

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 38.3 bits (89), Expect = 2e-04
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL-----VPGKDAGFMAKIVARGDK 73
           E ++    R+ L+ L+ +HS+ V H  IK DNILL     V   D GF A+I     K
Sbjct: 114 EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 171

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 15/35 (42%), Positives = 24/35 (68%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           E +V+ +  +I+  L+++HS G+ H  IK DNILL
Sbjct: 99  EEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILL 133

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 38.4 bits (89), Expect = 2e-04
 Identities = 17/35 (48%), Positives = 25/35 (71%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           E EVR Y+ +I+  L+H+H  G+ +  IKL+NILL
Sbjct: 104 EDEVRFYSGEIILALEHLHKLGIVYRDIKLENILL 138

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 37.8 bits (88), Expect = 2e-04
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL-----VPGKDAGFMAKI 67
           E ++      +L+ L  +H+ GV H  IK D+ILL     V   D GF A++
Sbjct: 114 EEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQV 165

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 37.8 bits (88), Expect = 2e-04
 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 7/61 (11%)

Query: 12  SKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARG 71
            KK  K++ E E+ R    +LRGL  +H   + H  +K  NILLV    A  + KI   G
Sbjct: 93  RKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLV----ANDLVKI---G 145

Query: 72  D 72
           D
Sbjct: 146 D 146

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 28  TRDILRGLDHIHSHGVAHCGIKLDNILL 55
            R++L GL+++H  G  H  IK  NILL
Sbjct: 104 LREVLLGLEYLHEEGKIHRDIKAANILL 131

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 7/60 (11%)

Query: 13  KKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGD 72
           KK  K   E ++  +   +   L ++HS  + H  IK  NI L     +  + K+   GD
Sbjct: 94  KKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFL----TSNGLVKL---GD 146

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 37.9 bits (88), Expect = 3e-04
 Identities = 15/35 (42%), Positives = 23/35 (65%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           E  VR +T  +L GL ++HS G+ H  +K DN+L+
Sbjct: 107 EQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLV 141

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 37.7 bits (87), Expect = 3e-04
 Identities = 16/35 (45%), Positives = 25/35 (71%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           E EV+ Y+ +I+  L+H+H  G+ +  IKL+NILL
Sbjct: 104 EQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILL 138

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 13/33 (39%), Positives = 23/33 (69%)

Query: 23  EVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           +++ Y + +L GL ++HS+G+ H  IK  NIL+
Sbjct: 101 QIKCYMKQLLEGLQYLHSNGILHRDIKGSNILI 133

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 37.4 bits (86), Expect = 3e-04
 Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 5/58 (8%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL-----VPGKDAGFMAKIVARGDK 73
           E ++    R+ L+ LD +HS+ V H  IK DNILL     V   D GF A+I     K
Sbjct: 114 EGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 171

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 37.3 bits (86), Expect = 4e-04
 Identities = 16/27 (59%), Positives = 20/27 (74%)

Query: 29  RDILRGLDHIHSHGVAHCGIKLDNILL 55
           R+ILRGL H+H+H V H  IK  N+LL
Sbjct: 128 REILRGLAHLHAHKVIHRDIKGQNVLL 154

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 37.2 bits (87), Expect = 4e-04
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 12  SKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNIL 54
           SK     L    ++   R +LRG+D +HSH + H  +K  NIL
Sbjct: 97  SKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNIL 139

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 37.3 bits (87), Expect = 4e-04
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNIL 54
              VR Y   +L+ + + HSH + H  IK +NIL
Sbjct: 99  PDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENIL 132

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 37.0 bits (85), Expect = 4e-04
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 14  KSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNIL 54
           K+   L E   R+YTR IL G+ ++HS+ + H  IK  NIL
Sbjct: 98  KAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANIL 138

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 37.0 bits (85), Expect = 4e-04
 Identities = 18/37 (48%), Positives = 22/37 (59%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           L E  +    R+ILRGL H+H H V H  IK  N+LL
Sbjct: 108 LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL 144

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 36.9 bits (86), Expect = 6e-04
 Identities = 19/54 (35%), Positives = 26/54 (48%)

Query: 2   ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
             S  +     +K  K L E  +    R+ LRGL ++H + V H  IK  NILL
Sbjct: 93  GGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILL 146

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 36.5 bits (85), Expect = 6e-04
 Identities = 15/37 (40%), Positives = 22/37 (59%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           L E  +R +   +LRGL +IHS  V H  +K  N+L+
Sbjct: 104 LTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLV 140

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 36.7 bits (85), Expect = 6e-04
 Identities = 12/45 (26%), Positives = 24/45 (53%)

Query: 11  HSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           + +   + L    ++ +   +L+G+ H H HGV H  +K  N+L+
Sbjct: 99  NGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLV 143

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 36.4 bits (84), Expect = 8e-04
 Identities = 16/35 (45%), Positives = 24/35 (68%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           E  VR + R IL+GL+++H+ G+ H  IK  NIL+
Sbjct: 105 ETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILV 139

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 36.1 bits (84), Expect = 0.001
 Identities = 14/38 (36%), Positives = 20/38 (52%)

Query: 18  ILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           +  E   R Y  +++  LD +H  G  H  IK DNIL+
Sbjct: 97  VFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILI 134

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 36.2 bits (83), Expect = 0.001
 Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 5/54 (9%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL-----VPGKDAGFMAKI 67
           L E ++      +L+ L ++HS GV H  IK D+ILL     V   D GF A+I
Sbjct: 114 LNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQI 167

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 35.4 bits (82), Expect = 0.001
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 6/57 (10%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL-----VPGKDAGFMAKIVARGD 72
           EH +++     L+ ++  H H   H  +K +NIL+     +   D GF A+I+    
Sbjct: 99  EHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGF-ARILTGPG 154

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 35.5 bits (81), Expect = 0.001
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL-----VPGKDAGFMAKIVARGDK 73
           E ++    R+ L+ L+ +HS+ V H  IK DNILL     V   D GF A+I     K
Sbjct: 115 EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional

 Score = 35.3 bits (81), Expect = 0.002
 Identities = 15/41 (36%), Positives = 28/41 (68%), Gaps = 1/41 (2%)

Query: 24  VRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFM 64
           ++   +D+L  L++IH HG++H  IK +NI +V G + G++
Sbjct: 128 IKNIMKDMLTTLEYIHEHGISHGDIKPENI-MVDGNNRGYI 167

Length = 294

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 35.4 bits (81), Expect = 0.002
 Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 17  KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLV-PGK 59
           K L E E+   T   L+GL ++HSH + H  IK  NILL  PG+
Sbjct: 120 KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQ 163

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 35.4 bits (81), Expect = 0.002
 Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 2/54 (3%)

Query: 2   ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           A+ G  F++ S++  ++  E   R Y  +I+  L+++HS  V +  IKL+N++L
Sbjct: 77  ANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML 128

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 35.2 bits (82), Expect = 0.002
 Identities = 12/38 (31%), Positives = 25/38 (65%)

Query: 18  ILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           +L   +++ Y    LRGL+++HS+ + H  +K +N+L+
Sbjct: 98  VLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLI 135

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 35.1 bits (81), Expect = 0.002
 Identities = 13/45 (28%), Positives = 24/45 (53%)

Query: 11  HSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           H KK  +++ E  + +Y   +   L+H+HS  + H  IK  N+ +
Sbjct: 95  HFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFI 139

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 35.2 bits (81), Expect = 0.002
 Identities = 17/39 (43%), Positives = 21/39 (53%)

Query: 17  KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           K L E E+       L+GL ++HSH   H  IK  NILL
Sbjct: 110 KPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILL 148

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 35.1 bits (81), Expect = 0.002
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 19/75 (25%)

Query: 14  KSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL------------------ 55
           +S + L +   + +   IL GL +IHS  V H  +K  N+L+                  
Sbjct: 97  RSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFS 156

Query: 56  -VPGKDAGFMAKIVA 69
             PG++AGFM + VA
Sbjct: 157 ENPGENAGFMTEYVA 171

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 35.0 bits (80), Expect = 0.003
 Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)

Query: 4   SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           +G +   H ++  K+  EH  R Y+ +I   L+++H  G+ +  +KLDN+LL
Sbjct: 79  NGGDLMFHMQRQRKLPEEH-ARFYSAEISLALNYLHERGIIYRDLKLDNVLL 129

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 34.8 bits (80), Expect = 0.003
 Identities = 14/25 (56%), Positives = 18/25 (72%)

Query: 31  ILRGLDHIHSHGVAHCGIKLDNILL 55
           ILRGL ++HS GV H  +K  NIL+
Sbjct: 117 ILRGLKYVHSAGVVHRDLKPSNILI 141

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 35.0 bits (80), Expect = 0.003
 Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 17  KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLV-PGK 59
           K L E E+   T   L+GL ++HSH + H  IK  NILL  PG+
Sbjct: 116 KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQ 159

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 34.6 bits (80), Expect = 0.003
 Identities = 13/27 (48%), Positives = 21/27 (77%)

Query: 29  RDILRGLDHIHSHGVAHCGIKLDNILL 55
           +++L+GL+++HS+G  H  IK  NILL
Sbjct: 109 KEVLKGLEYLHSNGQIHRDIKAGNILL 135

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 34.3 bits (79), Expect = 0.004
 Identities = 15/38 (39%), Positives = 19/38 (50%)

Query: 18  ILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
              E E R Y  + +  +D IH  G  H  IK DN+LL
Sbjct: 97  TFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLL 134

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 34.2 bits (78), Expect = 0.004
 Identities = 14/28 (50%), Positives = 18/28 (64%)

Query: 31  ILRGLDHIHSHGVAHCGIKLDNILLVPG 58
           +LRGLD +HSH V H  +K  NIL+   
Sbjct: 119 LLRGLDFLHSHRVVHRDLKPQNILVTSS 146

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	97
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.87
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.87
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.86
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.86
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.84
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.84
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.84
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.82
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.81
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.81
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.8
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.8
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.79
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.79
KOG0198	313	consensus MEKK and related serine/threonine protei	99.78
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.77
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.77
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.76
KOG0589	426	consensus Serine/threonine protein kinase [General	99.76
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.76
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.75
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.74
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.74
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.72
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.71
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.71
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.7
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.68
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.67
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.67
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.67
PHA03207	392	serine/threonine kinase US3; Provisional	99.67
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.67
KOG0578	550	consensus p21-activated serine/threonine protein k	99.67
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.67
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.67
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.67
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.66
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.66
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.66
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.66
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.66
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.66
PHA03211	461	serine/threonine kinase US3; Provisional	99.66
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.66
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.66
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.66
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.65
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.65
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.65
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.65
KOG0586	596	consensus Serine/threonine protein kinase [General	99.65
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.65
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.65
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.65
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.65
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.65
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.65
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.65
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.65
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.65
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.64
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.64
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.64
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.64
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.64
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.64
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.64
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.64
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.64
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.64
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.64
PHA03212	391	serine/threonine kinase US3; Provisional	99.63
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.63
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.63
KOG0605	550	consensus NDR and related serine/threonine kinases	99.63
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.63
PHA03209	357	serine/threonine kinase US3; Provisional	99.63
PTZ00267	478	NIMA-related protein kinase; Provisional	99.63
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.63
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.62
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.62
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.62
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.62
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.62
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.62
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.62
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.62
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.62
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.61
PTZ00283	496	serine/threonine protein kinase; Provisional	99.61
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.61
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.61
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.6
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.6
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.6
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.6
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.6
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.6
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.59
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.59
PHA02882	294	putative serine/threonine kinase; Provisional	99.59
PTZ00036	440	glycogen synthase kinase; Provisional	99.59
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.59
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.59
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.59
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.58
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.58
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.58
KOG0584	632	consensus Serine/threonine protein kinase [General	99.58
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.58
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.58
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.58
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.58
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.58
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.57
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.57
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.57
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.57
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.57
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.57
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.56
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.56
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.56
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.56
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.56
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.56
KOG0610	459	consensus Putative serine/threonine protein kinase	99.56
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.56
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.56
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.56
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.56
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.56
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.56
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.56
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.55
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.55
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.55
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.55
PTZ00284	467	protein kinase; Provisional	99.55
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.55
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.55
PLN00181	793	protein SPA1-RELATED; Provisional	99.54
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.54
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.54
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.54
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.54
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.54
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.54
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.54
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.53
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.53
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.53
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.53
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.53
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.53
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.53
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.52
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.52
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.52
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.52
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.52
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.52
KOG3653	534	consensus Transforming growth factor beta/activin	99.52
PHA03210	501	serine/threonine kinase US3; Provisional	99.52
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.52
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.51
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.51
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.51
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.51
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.51
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.51
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.51
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.51
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.51
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.51
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.51
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.51
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.51
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.5
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.5
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.5
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.5
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.5
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.5
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.5
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.5
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.5
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.5
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.5
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.49
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.49
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.49
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.49
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.49
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.49
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.49
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.49
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.49
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.49
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.49
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.49
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.49
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.48
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.48
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.48
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.48
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.48
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.48
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.48
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.48
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.48
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.48
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.48
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.47
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.47
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.47
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.47
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.47
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.47
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.47
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.47
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.47
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.47
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.47
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.47
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.47
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.47
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.47
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.46
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.46
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.46
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.46
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.46
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.46
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.46
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.46
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.46
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.46
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.46
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.46
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.46
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.46
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.46
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.46
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.46
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.46
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.45
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.45
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.45
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.45
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.45
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.45
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.45
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.45
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.45
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.44
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.44
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.44
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.44
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.44
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.44
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.44
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.43
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.43
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.43
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.43
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.43
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.43
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.43
KOG1152	772	consensus Signal transduction serine/threonine kin	99.43
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.43
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.42
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.42
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.42
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.42
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.42
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.42
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.42
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.42
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.42
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.42
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.41
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.41
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.41
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.41
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.41
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.41
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.41
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.41
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.41
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.41
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.41
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.4
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.4
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.4
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.4
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.4
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.4
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.4
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.4
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.4
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.4
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.4
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.4
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.4
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.4
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.4
PHA02988	283	hypothetical protein; Provisional	99.4
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.39
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.39
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.39
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.39
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.39
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.39
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.39
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.39
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.39
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.39
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.39
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.39
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.38
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.38
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.38
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.38
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.38
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.38
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.38
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.38
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.38
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.38
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.37
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.37
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.37
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.37
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.37
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.37
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.37
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.37
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.37
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.37
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.36
PRK10345	210	hypothetical protein; Provisional	99.36
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.36
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.36
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.36
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.36
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.36
PLN00009	294	cyclin-dependent kinase A; Provisional	99.36
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.36
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.36
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.36
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.36
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.35
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.35
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.35
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.35
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.35
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.35
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.35
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.34
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.34
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.34
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.34
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.34
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.34
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.34
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.33
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.33
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.33
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.33
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.32
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.32
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.32
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.31
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.31
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.31
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.31
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.3
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.3
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.3
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.29
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.28
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.28
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.28
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.28
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.28
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.27
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.27
PRK09188	365	serine/threonine protein kinase; Provisional	99.27
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.26
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.26
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.24
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.23
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.23
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.23
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.23
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.22
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.22
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.21
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.2
smart00090	237	RIO RIO-like kinase.	99.19
PRK12274	218	serine/threonine protein kinase; Provisional	99.19
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.18
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.17
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.16
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.16
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.12
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.12
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.12
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.05
PRK14879	211	serine/threonine protein kinase; Provisional	99.04
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.04
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.0
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.98
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	98.98
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.97
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.96
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.96
KOG1290	590	consensus Serine/threonine protein kinase [Signal	98.94
KOG1167	418	consensus Serine/threonine protein kinase of the C	98.88
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.87
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	98.75
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.74
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	98.66
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.55
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.52
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	98.47
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.47
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.44
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.39
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.39
KOG3087	229	consensus Serine/threonine protein kinase [General	98.39
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.38
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.35
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.29
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.28
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.24
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.98
PRK09902	216	hypothetical protein; Provisional	97.84
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.77
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	97.72
KOG0606	1205	consensus Microtubule-associated serine/threonine	97.67
KOG1266	458	consensus Protein kinase [Signal transduction mech	97.28
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.22
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.17
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.07
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	96.72
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	96.55
COG0478	304	RIO-like serine/threonine protein kinase fused to	95.94
KOG1243	690	consensus Protein kinase [General function predict	95.74
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	95.69
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	95.45
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	95.26
PRK05231	319	homoserine kinase; Provisional	95.07
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	94.98
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	94.75
COG0661	517	AarF Predicted unusual protein kinase [General fun	94.47
PF01636	239	APH: Phosphotransferase enzyme family This family	94.46
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	94.26
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	94.08
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	93.99
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	93.98
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	93.97
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	93.91
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	93.57
PRK10271	188	thiK thiamine kinase; Provisional	93.52
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	93.5
COG4248	637	Uncharacterized protein with protein kinase and he	93.48
KOG1235	538	consensus Predicted unusual protein kinase [Genera	93.28
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	93.25
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	93.19
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	93.08
COG2334	331	Putative homoserine kinase type II (protein kinase	93.05
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	93.04
PRK06149	972	hypothetical protein; Provisional	92.66
KOG2137	700	consensus Protein kinase [Signal transduction mech	92.11
KOG2268	465	consensus Serine/threonine protein kinase [Signal	91.87
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	91.65
KOG0606	1205	consensus Microtubule-associated serine/threonine	91.41
PLN02236	344	choline kinase	90.6
COG3178	351	Predicted phosphotransferase related to Ser/Thr pr	89.66
PRK06148	1013	hypothetical protein; Provisional	89.51
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	89.01
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	88.47
PHA03111	444	Ser/Thr kinase; Provisional	88.32
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	87.97
PRK11768	325	serine/threonine protein kinase; Provisional	87.73
PLN02876	822	acyl-CoA dehydrogenase	87.4
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	87.34
PRK09550	401	mtnK methylthioribose kinase; Reviewed	86.07
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	85.82
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	84.52
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	83.02

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.87  E-value=3.4e-22  Score=124.71  Aligned_cols=87  Identities=24%  Similarity=0.307  Sum_probs=76.4

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcce
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLN   83 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~~   83 (97)
                      .||+|++.+-.+ +.+.+...+.++.|++.|+.|+|++||+|||+||+||++... .+...+||.|||+|+... .....
T Consensus       259 ~GGeLfd~vv~n-k~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~-~e~~llKItDFGlAK~~g-~~sfm  335 (475)
T KOG0615|consen  259 EGGELFDKVVAN-KYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSND-AEDCLLKITDFGLAKVSG-EGSFM  335 (475)
T ss_pred             cCccHHHHHHhc-cccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccC-CcceEEEecccchhhccc-cceeh
Confidence            589999999887 559999999999999999999999999999999999999653 356889999999999877 35566


Q ss_pred             eeccccCccc
Q 038072           84 VTGVGEGQVA   93 (97)
Q Consensus        84 ~~~~~~~~~~   93 (97)
                      .|.||||.|.
T Consensus       336 ~TlCGTpsYv  345 (475)
T KOG0615|consen  336 KTLCGTPSYV  345 (475)
T ss_pred             hhhcCCcccc
Confidence            7899998885

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.87  E-value=5.3e-22  Score=123.48  Aligned_cols=89  Identities=20%  Similarity=0.264  Sum_probs=75.4

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCC--ceEEEeecCceeeeccCC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAG--FMAKIVARGDKCLHERHG   80 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~--~~~~i~dfg~a~~~~~~~   80 (97)
                      |.||||.+++... +.++|..++.++.|++.|+.++|+++|+|||+||+||++......+  ..+||+|||+|+...+ .
T Consensus        91 C~gGDLs~yi~~~-~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~-~  168 (429)
T KOG0595|consen   91 CNGGDLSDYIRRR-GRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQP-G  168 (429)
T ss_pred             CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCc-h
Confidence            5689999999997 4599999999999999999999999999999999999997642222  7899999999998886 4


Q ss_pred             cceeeccccCccc
Q 038072           81 LLNVTGVGEGQVA   93 (97)
Q Consensus        81 ~~~~~~~~~~~~~   93 (97)
                      ....|-||+|.|.
T Consensus       169 ~~a~tlcGSplYM  181 (429)
T KOG0595|consen  169 SMAETLCGSPLYM  181 (429)
T ss_pred             hHHHHhhCCcccc
Confidence            4556778776553

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.86  E-value=1.1e-21  Score=126.59  Aligned_cols=86  Identities=29%  Similarity=0.342  Sum_probs=79.7

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      |..++|+.+++.. +.++|.++..++.||+.|+.|+|+++|+|||+|..|+++    +++..+||+|||+|......++.
T Consensus       100 C~~~sL~el~Krr-k~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL----~~~~~VKIgDFGLAt~le~~~Er  174 (592)
T KOG0575|consen  100 CHRGSLMELLKRR-KPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFL----NENMNVKIGDFGLATQLEYDGER  174 (592)
T ss_pred             cCCccHHHHHHhc-CCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheee----cCcCcEEecccceeeeecCcccc
Confidence            5678999999965 669999999999999999999999999999999999999    88899999999999999999999


Q ss_pred             eeeccccCccc
Q 038072           83 NVTGVGEGQVA   93 (97)
Q Consensus        83 ~~~~~~~~~~~   93 (97)
                      ..|.||||-|.
T Consensus       175 k~TlCGTPNYI  185 (592)
T KOG0575|consen  175 KKTLCGTPNYI  185 (592)
T ss_pred             cceecCCCccc
Confidence            99999988764

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.86  E-value=1.7e-21  Score=122.65  Aligned_cols=86  Identities=28%  Similarity=0.339  Sum_probs=76.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCC-ceEEEeecCceeeeccCCc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAG-FMAKIVARGDKCLHERHGL   81 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~-~~~~i~dfg~a~~~~~~~~   81 (97)
                      +.||+|++++.. .+++.|.++..+++|++.|+.|||+++|+|||+|++|+++    +.+ ..+||+|||++......+.
T Consensus       102 ~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENill----d~~~~~~Kl~DFG~s~~~~~~~~  176 (370)
T KOG0583|consen  102 CSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILL----DGNEGNLKLSDFGLSAISPGEDG  176 (370)
T ss_pred             cCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEe----cCCCCCEEEeccccccccCCCCC
Confidence            356899999999 4779999999999999999999999999999999999999    666 8999999999998854455


Q ss_pred             ceeeccccCccc
Q 038072           82 LNVTGVGEGQVA   93 (97)
Q Consensus        82 ~~~~~~~~~~~~   93 (97)
                      ...+.+|++.|+
T Consensus       177 ~l~t~cGsp~Y~  188 (370)
T KOG0583|consen  177 LLKTFCGSPAYA  188 (370)
T ss_pred             cccCCCCCcccC
Confidence            667889888775

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.84  E-value=7.7e-21  Score=116.91  Aligned_cols=85  Identities=25%  Similarity=0.277  Sum_probs=78.1

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcce
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLN   83 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~~   83 (97)
                      .||+|...+.+. +.|+|..++.++.+++.|+.|+|+.+|+|||+||+||++    +....+++.|||+|+.....+...
T Consensus       108 ~GGeLf~hL~~e-g~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILL----d~~GHi~LtDFgL~k~~~~~~~~t  182 (357)
T KOG0598|consen  108 NGGELFYHLQRE-GRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILL----DEQGHIKLTDFGLCKEDLKDGDAT  182 (357)
T ss_pred             CCccHHHHHHhc-CCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeee----cCCCcEEEeccccchhcccCCCcc
Confidence            588999999986 669999999999999999999999999999999999999    889999999999999888888888


Q ss_pred             eeccccCccc
Q 038072           84 VTGVGEGQVA   93 (97)
Q Consensus        84 ~~~~~~~~~~   93 (97)
                      .++|||+.|.
T Consensus       183 ~tfcGT~eYm  192 (357)
T KOG0598|consen  183 RTFCGTPEYM  192 (357)
T ss_pred             ccccCCcccc
Confidence            8889877654

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.84  E-value=6.1e-21  Score=117.46  Aligned_cols=84  Identities=26%  Similarity=0.303  Sum_probs=74.1

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~-~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      .||+|.++++.. ++++|..+..++.+++.|+.|+|. ++|+|||+||+||++    +.+..+||+|||.++...+.  .
T Consensus       161 DgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLv----NskGeVKicDFGVS~~lvnS--~  233 (364)
T KOG0581|consen  161 DGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLV----NSKGEVKICDFGVSGILVNS--I  233 (364)
T ss_pred             CCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeee----ccCCCEEeccccccHHhhhh--h
Confidence            379999999887 669999999999999999999995 999999999999999    88999999999999998886  4


Q ss_pred             eeeccccCcccccc
Q 038072           83 NVTGVGEGQVADIS   96 (97)
Q Consensus        83 ~~~~~~~~~~~~~~   96 (97)
                      ..++.  |+..|||
T Consensus       234 a~tfv--GT~~YMs  245 (364)
T KOG0581|consen  234 ANTFV--GTSAYMS  245 (364)
T ss_pred             ccccc--ccccccC
Confidence            44554  5777886

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.84  E-value=1.6e-20  Score=113.52  Aligned_cols=82  Identities=24%  Similarity=0.248  Sum_probs=74.3

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcce
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLN   83 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~~   83 (97)
                      .||.|.+++++. ++|+++.++.++.|++.|+.|+|+..++.||+||+||++    +...-+||.|||+|+.....   .
T Consensus       127 ~GGElFS~Lrk~-~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLl----D~~G~iKitDFGFAK~v~~r---T  198 (355)
T KOG0616|consen  127 PGGELFSYLRKS-GRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLL----DQNGHIKITDFGFAKRVSGR---T  198 (355)
T ss_pred             CCccHHHHHHhc-CCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeee----ccCCcEEEEeccceEEecCc---E
Confidence            589999999998 669999999999999999999999999999999999999    88899999999999987653   6


Q ss_pred             eeccccCccc
Q 038072           84 VTGVGEGQVA   93 (97)
Q Consensus        84 ~~~~~~~~~~   93 (97)
                      .|-||||.|.
T Consensus       199 ~TlCGTPeYL  208 (355)
T KOG0616|consen  199 WTLCGTPEYL  208 (355)
T ss_pred             EEecCCcccc
Confidence            6778887764

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=2.1e-20  Score=118.40  Aligned_cols=79  Identities=28%  Similarity=0.399  Sum_probs=71.8

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      ||+...+|+++++.++..|++..++.++.|++.|+.|+|++|+.|||+||+||++    .....+||+|||+||......
T Consensus        89 fE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi----~~~~~iKiaDFGLARev~Skp  164 (538)
T KOG0661|consen   89 FEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILI----SGNDVIKIADFGLAREVRSKP  164 (538)
T ss_pred             HHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEe----cccceeEecccccccccccCC
Confidence            5677789999999887779999999999999999999999999999999999999    668899999999999888766


Q ss_pred             cce
Q 038072           81 LLN   83 (97)
Q Consensus        81 ~~~   83 (97)
                      .++
T Consensus       165 PYT  167 (538)
T KOG0661|consen  165 PYT  167 (538)
T ss_pred             Ccc
Confidence            554

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.81  E-value=3e-20  Score=116.97  Aligned_cols=84  Identities=31%  Similarity=0.338  Sum_probs=75.0

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcce
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLN   83 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~~   83 (97)
                      .||+|++++.+. +.+++.++..+++|+++|+.|||+++++|||+|.+||++    +.+..+||+|||++-.+.. ...-
T Consensus       136 S~GeLYDYiSer-~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILL----D~N~NiKIADFGLSNly~~-~kfL  209 (668)
T KOG0611|consen  136 SGGELYDYISER-GSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILL----DQNNNIKIADFGLSNLYAD-KKFL  209 (668)
T ss_pred             CCccHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHhhccceecccchhheee----cCCCCeeeeccchhhhhcc-ccHH
Confidence            489999999998 559999999999999999999999999999999999999    8899999999999876665 3344


Q ss_pred             eeccccCccc
Q 038072           84 VTGVGEGQVA   93 (97)
Q Consensus        84 ~~~~~~~~~~   93 (97)
                      .|+||+|-|+
T Consensus       210 qTFCGSPLYA  219 (668)
T KOG0611|consen  210 QTFCGSPLYA  219 (668)
T ss_pred             HHhcCCcccC
Confidence            6889988775

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.81  E-value=9.1e-20  Score=110.73  Aligned_cols=88  Identities=18%  Similarity=0.199  Sum_probs=75.2

Q ss_pred             CCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            4 SGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         4 ~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +||+|++.+..++ ..|+|.++..++.||..|+.|+|+.+|.|||+|++|++.+.+ ..+..+|+.|||+|+.-.....+
T Consensus       142 eGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t-~~na~lKLtDfGFAK~t~~~~~L  220 (400)
T KOG0604|consen  142 EGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTT-SPNAPLKLTDFGFAKETQEPGDL  220 (400)
T ss_pred             cchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecC-CCCcceEecccccccccCCCccc
Confidence            5899999998763 349999999999999999999999999999999999999766 66788999999999987753333


Q ss_pred             eeeccccCccc
Q 038072           83 NVTGVGEGQVA   93 (97)
Q Consensus        83 ~~~~~~~~~~~   93 (97)
                       ++.|.||.|.
T Consensus       221 -~TPc~TPyYv  230 (400)
T KOG0604|consen  221 -MTPCFTPYYV  230 (400)
T ss_pred             -cCCccccccc
Confidence             4667777775

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.80  E-value=1e-19  Score=119.06  Aligned_cols=84  Identities=29%  Similarity=0.377  Sum_probs=74.9

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcce
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLN   83 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~~   83 (97)
                      .||.|++++-+. +++++.++..+++|++.|+.|||..+++|||+|++|+++    +....+||+|||+|..-.+ +.+-
T Consensus        95 ~gGELFdylv~k-G~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLL----d~~~nIKIADFGMAsLe~~-gklL  168 (786)
T KOG0588|consen   95 PGGELFDYLVRK-GPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLL----DVKNNIKIADFGMASLEVP-GKLL  168 (786)
T ss_pred             CCchhHHHHHhh-CCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhh----hcccCEeeeccceeecccC-Cccc
Confidence            589999998876 669999999999999999999999999999999999999    6666699999999987665 4455


Q ss_pred             eeccccCccc
Q 038072           84 VTGVGEGQVA   93 (97)
Q Consensus        84 ~~~~~~~~~~   93 (97)
                      +|.||+|+|+
T Consensus       169 eTSCGSPHYA  178 (786)
T KOG0588|consen  169 ETSCGSPHYA  178 (786)
T ss_pred             cccCCCcccC
Confidence            7889999986

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.80  E-value=2.4e-19  Score=115.09  Aligned_cols=72  Identities=29%  Similarity=0.362  Sum_probs=66.9

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      ..+|+|.+++++. +.|++..++.++.+++.|++|+|++||||||+||+||++    +.+..++|.|||.|+.+...
T Consensus       156 A~nGdll~~i~K~-Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILL----d~dmhikITDFGsAK~l~~~  227 (604)
T KOG0592|consen  156 APNGDLLDLIKKY-GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILL----DKDGHIKITDFGSAKILSPS  227 (604)
T ss_pred             cCCCcHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeE----cCCCcEEEeeccccccCChh
Confidence            3579999999998 669999999999999999999999999999999999999    88999999999999987653

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.79  E-value=8.9e-20  Score=117.00  Aligned_cols=86  Identities=21%  Similarity=0.218  Sum_probs=79.6

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCc
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGL   81 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~   81 (97)
                      +|.||++...++.. +.|++..++.+..+++.|+.|+|+++++.||+||+|+++    +....+|+.|||+|+.... +.
T Consensus       501 aClGGElWTiLrdR-g~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllL----d~~Gy~KLVDFGFAKki~~-g~  574 (732)
T KOG0614|consen  501 ACLGGELWTILRDR-GSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLL----DNRGYLKLVDFGFAKKIGS-GR  574 (732)
T ss_pred             hhcCchhhhhhhhc-CCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheee----ccCCceEEeehhhHHHhcc-CC
Confidence            47899999999987 669999999999999999999999999999999999999    8889999999999988776 66


Q ss_pred             ceeeccccCccc
Q 038072           82 LNVTGVGEGQVA   93 (97)
Q Consensus        82 ~~~~~~~~~~~~   93 (97)
                      ..+|+||||.|.
T Consensus       575 KTwTFcGTpEYV  586 (732)
T KOG0614|consen  575 KTWTFCGTPEYV  586 (732)
T ss_pred             ceeeecCCcccc
Confidence            789999999886

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.79  E-value=2.5e-19  Score=108.09  Aligned_cols=86  Identities=24%  Similarity=0.244  Sum_probs=73.7

Q ss_pred             CCCCCHHHHHhh---cccccCHHHHHHHHHHHHHHHHHHHH--cC--ccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            3 SSGVNFYNHSKK---SAKILLEHEVRRYTRDILRGLDHIHS--HG--VAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         3 ~~g~~l~~~l~~---~~~~l~~~~~~~~~~~i~~~l~~~h~--~~--~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      |.+|||.++++.   .++.++|+.++.++.|++.|+.+||.  .+  |+|||+||.||++    +.+..+|+.|||+++.
T Consensus       102 c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl----~~~gvvKLGDfGL~r~  177 (375)
T KOG0591|consen  102 CDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFL----TANGVVKLGDFGLGRF  177 (375)
T ss_pred             hcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEE----cCCCceeeccchhHhH
Confidence            568999999874   33459999999999999999999998  44  9999999999999    7788999999999999


Q ss_pred             eccCCcceeeccccCcc
Q 038072           76 HERHGLLNVTGVGEGQV   92 (97)
Q Consensus        76 ~~~~~~~~~~~~~~~~~   92 (97)
                      +.+...-..+.+|||.|
T Consensus       178 l~s~~tfA~S~VGTPyY  194 (375)
T KOG0591|consen  178 LSSKTTFAHSLVGTPYY  194 (375)
T ss_pred             hcchhHHHHhhcCCCcc
Confidence            88876666667776554

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.78  E-value=1.5e-18  Score=106.88  Aligned_cols=72  Identities=40%  Similarity=0.511  Sum_probs=65.6

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCC-CceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDA-GFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~-~~~~~i~dfg~a~~~~~   78 (97)
                      +.||+|.+++...++.+++..++.+.+|++.|+.|+|+++++|+|+|++||++    .. +..+||+|||.++....
T Consensus        98 ~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl----~~~~~~~KlaDFG~a~~~~~  170 (313)
T KOG0198|consen   98 APGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILL----DPSNGDVKLADFGLAKKLES  170 (313)
T ss_pred             cCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEE----eCCCCeEEeccCcccccccc
Confidence            35899999999875569999999999999999999999999999999999999    66 68999999999987764

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.77  E-value=5.4e-19  Score=108.70  Aligned_cols=73  Identities=27%  Similarity=0.321  Sum_probs=66.1

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +..+.||++.++.+ ..+++..++.++.|++.|++|+|+.+|+|||+||.|+++    +.+..+||+|||+|+.....
T Consensus       106 elMetDL~~iik~~-~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~----n~~c~lKI~DFGLAR~~~~~  178 (359)
T KOG0660|consen  106 ELMETDLHQIIKSQ-QDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLL----NADCDLKICDFGLARYLDKF  178 (359)
T ss_pred             hHHhhHHHHHHHcC-ccccHHHHHHHHHHHHHhcchhhcccccccccchhheee----ccCCCEEeccccceeecccc
Confidence            44578999999986 339999999999999999999999999999999999999    78899999999999988653

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.77  E-value=9e-19  Score=105.67  Aligned_cols=83  Identities=27%  Similarity=0.384  Sum_probs=72.6

Q ss_pred             CCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCccee
Q 038072            5 GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLNV   84 (97)
Q Consensus         5 g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~~~   84 (97)
                      -|.|++++.+.-. ++++....+++|+..++.|+|..+|+|||+|++||++    +++..++|.|||+++...+..... 
T Consensus       107 rGELFDyLts~Vt-lSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILl----ddn~~i~isDFGFa~~l~~GekLr-  180 (411)
T KOG0599|consen  107 RGELFDYLTSKVT-LSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILL----DDNMNIKISDFGFACQLEPGEKLR-  180 (411)
T ss_pred             cchHHHHhhhhee-ecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheee----ccccceEEeccceeeccCCchhHH-
Confidence            4889999988633 9999999999999999999999999999999999999    889999999999999988866554 


Q ss_pred             eccccCccc
Q 038072           85 TGVGEGQVA   93 (97)
Q Consensus        85 ~~~~~~~~~   93 (97)
                      .-||||.|.
T Consensus       181 elCGTPgYL  189 (411)
T KOG0599|consen  181 ELCGTPGYL  189 (411)
T ss_pred             HhcCCCccc
Confidence            336766653

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.76  E-value=8.9e-19  Score=106.57  Aligned_cols=71  Identities=17%  Similarity=0.224  Sum_probs=62.6

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      ....++.+-+......+++..++.+++|++.|+.|||+++++|||+||+||++    +.+..+|++|||+|+...
T Consensus        82 ~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILi----t~~gvvKLCDFGFAR~L~  152 (396)
T KOG0593|consen   82 YCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILI----TQNGVVKLCDFGFARTLS  152 (396)
T ss_pred             ecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEE----ecCCcEEeccchhhHhhc
Confidence            33455666666666669999999999999999999999999999999999999    778999999999999877

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.76  E-value=8.7e-19  Score=110.97  Aligned_cols=87  Identities=21%  Similarity=0.222  Sum_probs=76.8

Q ss_pred             CCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCc
Q 038072            3 SSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGL   81 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~   81 (97)
                      |+||++.+.+++.+ ..|+++.+..|+.|++.|+.|||+..|+|||+|..||++    +.+..+++.|||+|+...+...
T Consensus        86 ~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifl----tk~~~VkLgDfGlaK~l~~~~~  161 (426)
T KOG0589|consen   86 CEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFL----TKDKKVKLGDFGLAKILNPEDS  161 (426)
T ss_pred             cCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhc----cccCceeecchhhhhhcCCchh
Confidence            57999999998875 448999999999999999999999999999999999999    6677889999999999998776


Q ss_pred             ceeeccccCccc
Q 038072           82 LNVTGVGEGQVA   93 (97)
Q Consensus        82 ~~~~~~~~~~~~   93 (97)
                      ...+..|||.|.
T Consensus       162 ~a~tvvGTp~Ym  173 (426)
T KOG0589|consen  162 LASTVVGTPYYM  173 (426)
T ss_pred             hhheecCCCccc
Confidence            766777776653

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=6.6e-19  Score=115.28  Aligned_cols=84  Identities=26%  Similarity=0.346  Sum_probs=74.2

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcce
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLN   83 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~~   83 (97)
                      .|||++.+...  +.|++..+..++.+++.||.|+|+++|++||+|.+||++    +....+||+|||+|+.....+..+
T Consensus       452 ~Ggdm~~~~~~--~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLL----D~eGh~kiADFGlcKe~m~~g~~T  525 (694)
T KOG0694|consen  452 AGGDLMHHIHT--DVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLL----DTEGHVKIADFGLCKEGMGQGDRT  525 (694)
T ss_pred             CCCcEEEEEec--ccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEE----cccCcEEecccccccccCCCCCcc
Confidence            46775544443  569999999999999999999999999999999999999    889999999999999998778888


Q ss_pred             eeccccCccc
Q 038072           84 VTGVGEGQVA   93 (97)
Q Consensus        84 ~~~~~~~~~~   93 (97)
                      .|+||||.|.
T Consensus       526 sTfCGTpey~  535 (694)
T KOG0694|consen  526 STFCGTPEFL  535 (694)
T ss_pred             ccccCChhhc
Confidence            8999988764

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.75  E-value=2.9e-18  Score=105.12  Aligned_cols=71  Identities=23%  Similarity=0.334  Sum_probs=62.4

Q ss_pred             CCCCCHHHHHhhcc---cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSA---KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~---~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      ....||..++....   ..++...++.+++|++.|+.|||+++|+|||+||.||++    +....+|++|||+|+.+.
T Consensus        98 ~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi----~~~G~lKlaDFGlAra~~  171 (323)
T KOG0594|consen   98 FLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLI----SSSGVLKLADFGLARAFS  171 (323)
T ss_pred             eecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEE----CCCCcEeeeccchHHHhc
Confidence            34568888888754   348889999999999999999999999999999999999    778999999999998655

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.74  E-value=1.1e-17  Score=105.08  Aligned_cols=87  Identities=26%  Similarity=0.225  Sum_probs=72.4

Q ss_pred             CCCCHHHHHhh-cccccCHHHHHHHHHHHHHHHHHHHHcC-ccccCCCCCcEEEeeCCCCCc-eEEEeecCceeeeccCC
Q 038072            4 SGVNFYNHSKK-SAKILLEHEVRRYTRDILRGLDHIHSHG-VAHCGIKLDNILLVPGKDAGF-MAKIVARGDKCLHERHG   80 (97)
Q Consensus         4 ~g~~l~~~l~~-~~~~l~~~~~~~~~~~i~~~l~~~h~~~-~~~~~l~~~~i~~~~~~~~~~-~~~i~dfg~a~~~~~~~   80 (97)
                      .+|+|.+++.. .+..++...+..++.+++.|+.|+|+++ |+|||+|++|+++    .... .+||+|||+++......
T Consensus       123 ~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv----~~~~~~~KI~DFGlsr~~~~~~  198 (362)
T KOG0192|consen  123 PGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILV----DLKGKTLKIADFGLSREKVISK  198 (362)
T ss_pred             CCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEE----cCCCCEEEECCCccceeecccc
Confidence            57999999987 3566999999999999999999999999 9999999999999    6665 99999999998776543


Q ss_pred             cceeeccccCcccccc
Q 038072           81 LLNVTGVGEGQVADIS   96 (97)
Q Consensus        81 ~~~~~~~~~~~~~~~~   96 (97)
                      .. .+ ...|++.||+
T Consensus       199 ~~-~~-~~~GT~~wMA  212 (362)
T KOG0192|consen  199 TS-MT-SVAGTYRWMA  212 (362)
T ss_pred             cc-cc-CCCCCccccC
Confidence            11 11 2466788885

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.74  E-value=7.6e-18  Score=107.57  Aligned_cols=77  Identities=26%  Similarity=0.315  Sum_probs=67.1

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCc
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGL   81 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~   81 (97)
                      ++..-||.-++....-.|++.+++.++.|++.|+.|||+++++|||+|.+||++    +.+..+||+|||+|+.+.....
T Consensus       198 eYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLi----dn~G~LKiaDFGLAr~y~~~~~  273 (560)
T KOG0600|consen  198 EYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILI----DNNGVLKIADFGLARFYTPSGS  273 (560)
T ss_pred             ecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEE----cCCCCEEeccccceeeccCCCC
Confidence            455567777777654459999999999999999999999999999999999999    8899999999999998877654


Q ss_pred             c
Q 038072           82 L   82 (97)
Q Consensus        82 ~   82 (97)
                      .
T Consensus       274 ~  274 (560)
T KOG0600|consen  274 A  274 (560)
T ss_pred             c
Confidence            4

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.72  E-value=7.2e-18  Score=103.66  Aligned_cols=75  Identities=24%  Similarity=0.270  Sum_probs=69.9

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      |++...||.+++...+++|...+++.++.|++.|+.|+|.+-++|||+|++|+++    .....+||+|||+|+.+...
T Consensus       156 Me~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm----~~~G~lKiaDFGLAR~ygsp  230 (419)
T KOG0663|consen  156 MEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLL----SHKGILKIADFGLAREYGSP  230 (419)
T ss_pred             HHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheee----ccCCcEEecccchhhhhcCC
Confidence            6777889999999987789999999999999999999999999999999999999    77899999999999987765

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.71  E-value=6.9e-17  Score=102.22  Aligned_cols=88  Identities=24%  Similarity=0.305  Sum_probs=76.1

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||+|++.+... . +++..+..++.|++.++.|+|+.+++|||+||+|+++......+..++++|||++..... ...
T Consensus       118 ~~GGeLfd~i~~~-~-~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~-~~~  194 (382)
T KOG0032|consen  118 CEGGELFDRIVKK-H-YSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP-GER  194 (382)
T ss_pred             cCCchHHHHHHHc-c-CCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC-Cce
Confidence            4589999998876 4 999999999999999999999999999999999999966533456899999999999888 556


Q ss_pred             eeeccccCccc
Q 038072           83 NVTGVGEGQVA   93 (97)
Q Consensus        83 ~~~~~~~~~~~   93 (97)
                      ..+.+|++.|.
T Consensus       195 ~~~~~Gtp~y~  205 (382)
T KOG0032|consen  195 LHTIVGTPEYV  205 (382)
T ss_pred             EeeecCCcccc
Confidence            66778887764

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.71  E-value=6.4e-17  Score=106.48  Aligned_cols=91  Identities=24%  Similarity=0.276  Sum_probs=76.5

Q ss_pred             CCCCCCCHHHHHhhc--ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKS--AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~--~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |.|.||||...+++-  ...|++.++..++..+..|+.|+|.++|+|||+||.||++-.++++....|+.|||.|+-.+.
T Consensus        97 EyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d  176 (732)
T KOG4250|consen   97 EYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDD  176 (732)
T ss_pred             eecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCC
Confidence            468899999999863  233999999999999999999999999999999999999988766788899999999998876


Q ss_pred             CCcceeeccccCcc
Q 038072           79 HGLLNVTGVGEGQV   92 (97)
Q Consensus        79 ~~~~~~~~~~~~~~   92 (97)
                      .. ......||+.|
T Consensus       177 ~s-~~~S~vGT~~Y  189 (732)
T KOG4250|consen  177 NS-LFTSLVGTEEY  189 (732)
T ss_pred             CC-eeeeecCchhh
Confidence            55 44455555443

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.70  E-value=2.9e-17  Score=106.82  Aligned_cols=89  Identities=19%  Similarity=0.263  Sum_probs=73.9

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      |.|.+|+.++.-.+..|+......+++|++.|+.|||.++|+|+|+|..||++    .++..++|.|||++.....+..-
T Consensus       469 CeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl----~~~~kVkIgDFGLatvk~~w~g~  544 (678)
T KOG0193|consen  469 CEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFL----HEDLKVKIGDFGLATVKTRWSGE  544 (678)
T ss_pred             ccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEE----ccCCcEEEecccceeeeeeeccc
Confidence            78999999998766779999999999999999999999999999999999999    67799999999999877766433


Q ss_pred             eeeccccCccccc
Q 038072           83 NVTGVGEGQVADI   95 (97)
Q Consensus        83 ~~~~~~~~~~~~~   95 (97)
                      .....-++..-||
T Consensus       545 ~q~~qp~gsilwm  557 (678)
T KOG0193|consen  545 QQLEQPHGSLLWM  557 (678)
T ss_pred             cccCCCccchhhh
Confidence            3333334444455

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.68  E-value=2.2e-16  Score=97.85  Aligned_cols=70  Identities=26%  Similarity=0.342  Sum_probs=62.5

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++... +.+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..++|+|||+++...
T Consensus        77 ~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll----~~~~~~kl~DfG~a~~~~  146 (323)
T cd05571          77 ANGGELFFHLSRE-RVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLML----DKDGHIKITDFGLCKEGI  146 (323)
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE----CCCCCEEEeeCCCCcccc
Confidence            4578999998875 458999999999999999999999999999999999999    677889999999987643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.67  E-value=4.7e-16  Score=96.70  Aligned_cols=72  Identities=24%  Similarity=0.257  Sum_probs=64.6

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.||+|.+++......+++..+..++.|++.++.|+|+++++|+|+|++||++    .....++|+|||++.....
T Consensus        83 ~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill----~~~~~~kl~DfG~a~~~~~  154 (331)
T cd05624          83 YVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLL----DMNGHIRLADFGSCLKMNQ  154 (331)
T ss_pred             CCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEE----cCCCCEEEEeccceeeccC
Confidence            35899999998755669999999999999999999999999999999999999    6677899999999977654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.67  E-value=5.5e-16  Score=94.04  Aligned_cols=72  Identities=13%  Similarity=0.155  Sum_probs=64.1

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ..+|+|.+++....+.+++..+..++.|++.|+.|+|+++++|+|++++||++    .....++++|||+++....
T Consensus        90 ~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~----~~~~~~kL~dfG~~~~~~~  161 (279)
T cd05109          90 MPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLV----KSPNHVKITDFGLARLLDI  161 (279)
T ss_pred             CCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE----cCCCcEEECCCCceeeccc
Confidence            35789999998765669999999999999999999999999999999999999    6667799999999987654

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=2.9e-16  Score=97.46  Aligned_cols=70  Identities=24%  Similarity=0.312  Sum_probs=62.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++... +.+++..+..++.|++.|+.|+|+++++|+|+|++||++    ..+..++|+|||++....
T Consensus        78 ~~~g~L~~~l~~~-~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili----~~~~~~kl~Dfg~a~~~~  147 (330)
T cd05586          78 MSGGELFWHLQKE-GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILL----DATGHIALCDFGLSKANL  147 (330)
T ss_pred             CCCChHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE----CCCCCEEEecCCcCcCCC
Confidence            3578999988775 559999999999999999999999999999999999999    667889999999987543

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.67  E-value=3e-16  Score=99.58  Aligned_cols=74  Identities=24%  Similarity=0.365  Sum_probs=64.4

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      |+..+++|.+++... ..+++..+..++.|++.|+.|+|+++++|+|+|++||++    .....++|+|||++......
T Consensus       165 ~e~~~~~l~~~l~~~-~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill----~~~~~~~l~DfG~a~~~~~~  238 (392)
T PHA03207        165 MPKYKCDLFTYVDRS-GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFL----DEPENAVLGDFGAACKLDAH  238 (392)
T ss_pred             ehhcCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE----cCCCCEEEccCccccccCcc
Confidence            455678899988554 559999999999999999999999999999999999999    67788999999999765543

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.67  E-value=3.7e-16  Score=95.91  Aligned_cols=73  Identities=21%  Similarity=0.223  Sum_probs=64.3

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      |+..+++|.+++....+.+++..+..++.|++.|+.|+|+++++|+|+|++||++    .....++|+|||++....
T Consensus        82 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill----~~~~~~kl~Dfg~~~~~~  154 (303)
T cd07869          82 FEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLI----SDTGELKLADFGLARAKS  154 (303)
T ss_pred             EECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----CCCCCEEECCCCcceecc
Confidence            4556788999888765668999999999999999999999999999999999999    667889999999987543

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.67  E-value=3e-16  Score=101.15  Aligned_cols=82  Identities=28%  Similarity=0.325  Sum_probs=71.6

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcce
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLN   83 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~~   83 (97)
                      .||+|.+.+..  ..++|.++..++++++.||.|+|.++|+|||+|.+||++    ..+..+||.|||+|..+.......
T Consensus       353 ~ggsLTDvVt~--~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL----~~~g~vKltDFGFcaqi~~~~~KR  426 (550)
T KOG0578|consen  353 EGGSLTDVVTK--TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILL----TMDGSVKLTDFGFCAQISEEQSKR  426 (550)
T ss_pred             CCCchhhhhhc--ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEe----ccCCcEEEeeeeeeeccccccCcc
Confidence            47889999887  459999999999999999999999999999999999999    777889999999999888766555


Q ss_pred             eeccccCc
Q 038072           84 VTGVGEGQ   91 (97)
Q Consensus        84 ~~~~~~~~   91 (97)
                      .+-+|||.
T Consensus       427 ~TmVGTPY  434 (550)
T KOG0578|consen  427 STMVGTPY  434 (550)
T ss_pred             ccccCCCC
Confidence            56666654

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.67  E-value=2.5e-16  Score=107.98  Aligned_cols=87  Identities=32%  Similarity=0.365  Sum_probs=73.8

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcce
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLN   83 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~~   83 (97)
                      .||||..++.+-. +++++.++++...++.|+.-+|+.|.||||+||+|+++    +..+.+|++|||.|-.....+...
T Consensus       158 pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLl----d~~GHikLADFGsClkm~~dG~V~  232 (1317)
T KOG0612|consen  158 PGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLL----DKSGHIKLADFGSCLKMDADGTVR  232 (1317)
T ss_pred             cCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEe----cccCcEeeccchhHHhcCCCCcEE
Confidence            6999999999985 79999999999999999999999999999999999999    889999999999998887655443


Q ss_pred             eeccccCcccccc
Q 038072           84 VTGVGEGQVADIS   96 (97)
Q Consensus        84 ~~~~~~~~~~~~~   96 (97)
                       .....|++-|+|
T Consensus       233 -s~~aVGTPDYIS  244 (1317)
T KOG0612|consen  233 -SSVAVGTPDYIS  244 (1317)
T ss_pred             -eccccCCCCccC
Confidence             223344444554

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=5.1e-16  Score=95.80  Aligned_cols=70  Identities=24%  Similarity=0.296  Sum_probs=62.9

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++... +.+++..+..++.|++.|+.|+|+++++|+|++++||++    ..+..++|+|||+++...
T Consensus        75 ~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili----~~~~~~kl~Dfg~~~~~~  144 (312)
T cd05585          75 INGGELFHHLQRE-GRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILL----DYQGHIALCDFGLCKLNM  144 (312)
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEE----CCCCcEEEEECcccccCc
Confidence            4589999999875 559999999999999999999999999999999999999    777889999999997643

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.67  E-value=1.3e-16  Score=98.44  Aligned_cols=78  Identities=24%  Similarity=0.316  Sum_probs=65.0

Q ss_pred             CCCCCCHHHHHhh---cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKK---SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~---~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ++.-.+|++.++.   .+..++.-.++.+.+|+..|+.|+|+.+|+|||+||.|+++.   .....+||+|||.|+...+
T Consensus       102 eymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD---~~tg~LKicDFGSAK~L~~  178 (364)
T KOG0658|consen  102 EYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVD---PDTGVLKICDFGSAKVLVK  178 (364)
T ss_pred             HhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEc---CCCCeEEeccCCcceeecc
Confidence            4455678888874   235589999999999999999999999999999999999994   3468899999999998876


Q ss_pred             CCcc
Q 038072           79 HGLL   82 (97)
Q Consensus        79 ~~~~   82 (97)
                      ....
T Consensus       179 ~epn  182 (364)
T KOG0658|consen  179 GEPN  182 (364)
T ss_pred             CCCc
Confidence            4433

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.66  E-value=4.9e-16  Score=96.48  Aligned_cols=71  Identities=31%  Similarity=0.410  Sum_probs=63.0

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++.+. ..+++..+..++.|++.++.|+|+++++|+|+|++||++    ..+..++|+|||++.....
T Consensus        87 ~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili----~~~~~~kl~DfG~~~~~~~  157 (332)
T cd05614          87 VSGGEMFTHLYQR-DNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILL----DSEGHVVLTDFGLSKEFLS  157 (332)
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEE----CCCCCEEEeeCcCCccccc
Confidence            3578999998775 459999999999999999999999999999999999999    6678899999999976543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.66  E-value=3.7e-17  Score=100.82  Aligned_cols=85  Identities=25%  Similarity=0.305  Sum_probs=77.2

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcce
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLN   83 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~~   83 (97)
                      .||.|+-.++.. ..++++..+.+..+|+.|+.|+|+++|+.||+|.+|+++    +.+..+||.|||+|+.....+...
T Consensus       251 nGGeLf~HLsre-r~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlL----DkDGHIKitDFGLCKE~I~~g~t~  325 (516)
T KOG0690|consen  251 NGGELFFHLSRE-RVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLL----DKDGHIKITDFGLCKEEIKYGDTT  325 (516)
T ss_pred             cCceEeeehhhh-hcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhhee----ccCCceEeeecccchhccccccee
Confidence            367787777765 459999999999999999999999999999999999999    889999999999999999999999


Q ss_pred             eeccccCccc
Q 038072           84 VTGVGEGQVA   93 (97)
Q Consensus        84 ~~~~~~~~~~   93 (97)
                      .|+||+|.|.
T Consensus       326 kTFCGTPEYL  335 (516)
T KOG0690|consen  326 KTFCGTPEYL  335 (516)
T ss_pred             ccccCChhhc
Confidence            9999998874

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.66  E-value=7.6e-16  Score=95.55  Aligned_cols=72  Identities=18%  Similarity=0.268  Sum_probs=65.0

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++......+++..+..++.|++.++.|+|+.+++|+|++++||++    +....++|+|||++.....
T Consensus        83 ~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll----~~~~~~kL~Dfg~a~~~~~  154 (330)
T cd05601          83 QPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLI----DRTGHIKLADFGSAARLTA  154 (330)
T ss_pred             CCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEE----CCCCCEEeccCCCCeECCC
Confidence            35899999998865669999999999999999999999999999999999999    7778899999999987654

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.66  E-value=7.8e-16  Score=95.04  Aligned_cols=72  Identities=13%  Similarity=0.127  Sum_probs=64.4

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ..+|+|.+++......+++..+..++.|++.|+.|+|+++++|+|++++||++    ..+..++|+|||+++....
T Consensus        90 ~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill----~~~~~~kl~DfG~a~~~~~  161 (316)
T cd05108          90 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGA  161 (316)
T ss_pred             CCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEe----cCCCcEEEccccccccccC
Confidence            45789999998865668999999999999999999999999999999999999    6677899999999987654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.66  E-value=7.1e-16  Score=95.92  Aligned_cols=72  Identities=24%  Similarity=0.246  Sum_probs=64.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.||+|.+++.+....+++..+..++.|++.++.++|+.+++|+|+|++||++    +.+..++|+|||++.....
T Consensus        83 ~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili----~~~~~~kL~DfG~a~~~~~  154 (332)
T cd05623          83 YVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM----DMNGHIRLADFGSCLKLME  154 (332)
T ss_pred             cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE----CCCCCEEEeecchheeccc
Confidence            46899999998755669999999999999999999999999999999999999    6778899999999876543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.66  E-value=6.7e-16  Score=95.50  Aligned_cols=71  Identities=30%  Similarity=0.359  Sum_probs=63.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++... ..+++..+..++.|++.|+.|+|+++++|+|++++||++    ..+..++|+|||++.....
T Consensus        78 ~~gg~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill----~~~~~~kL~Dfg~a~~~~~  148 (316)
T cd05592          78 LNGGDLMFHIQSS-GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLL----DKDGHIKIADFGMCKENMN  148 (316)
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEE----CCCCCEEEccCcCCeECCC
Confidence            3589999998775 459999999999999999999999999999999999999    6778899999999976543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.66  E-value=5.1e-16  Score=100.43  Aligned_cols=73  Identities=22%  Similarity=0.317  Sum_probs=63.6

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +...++|.+++......+++..+..++.|++.++.|+|+++++|+|+|++||++    .....++|+|||+++....
T Consensus       240 e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl----~~~~~vkL~DFGla~~~~~  312 (461)
T PHA03211        240 PKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLV----NGPEDICLGDFGAACFARG  312 (461)
T ss_pred             EccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEE----CCCCCEEEcccCCceeccc
Confidence            334578888887755569999999999999999999999999999999999999    6678899999999986543

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.66  E-value=4.7e-16  Score=93.23  Aligned_cols=76  Identities=21%  Similarity=0.212  Sum_probs=67.8

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      ..-.||...++.....++..+++.++.+++.|+.|||++.++|||+||.|+++    ..+..+||+|||+|+.+.+.+..
T Consensus        82 fm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLi----s~~g~lKiADFGLAr~f~~p~~~  157 (318)
T KOG0659|consen   82 FMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLI----SSDGQLKIADFGLARFFGSPNRI  157 (318)
T ss_pred             eccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEE----cCCCcEEeecccchhccCCCCcc
Confidence            34568888888876779999999999999999999999999999999999999    88999999999999988754443

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.66  E-value=9.1e-16  Score=95.44  Aligned_cols=72  Identities=25%  Similarity=0.278  Sum_probs=64.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++.+....+++..+..++.|++.++.|+|+++++|+|++++||++    ..+..++|+|||++.....
T Consensus        83 ~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill----~~~~~~kl~Dfg~~~~~~~  154 (331)
T cd05597          83 YVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLL----DKNGHIRLADFGSCLRLLA  154 (331)
T ss_pred             CCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEE----CCCCCEEEEECCceeecCC
Confidence            35899999998754569999999999999999999999999999999999999    6778899999999876543

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.66  E-value=9.3e-16  Score=95.08  Aligned_cols=69  Identities=29%  Similarity=0.326  Sum_probs=61.9

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      +.|++|.+++... ..+++..+..++.|++.|+.|+|+++++|+|++++||++    ..+..++|+|||++...
T Consensus        83 ~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill----~~~~~~kL~Dfg~~~~~  151 (324)
T cd05587          83 VNGGDLMYHIQQV-GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML----DAEGHIKIADFGMCKEN  151 (324)
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE----cCCCCEEEeecCcceec
Confidence            3589999998775 458999999999999999999999999999999999999    66788999999998754

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.65  E-value=9.5e-16  Score=96.78  Aligned_cols=70  Identities=29%  Similarity=0.332  Sum_probs=62.8

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.||+|.+++...  .+++..+..++.|++.|+.|+|+++++|+|+|++||++    +....++|+|||++.....
T Consensus       125 ~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl----~~~~~~kL~DFG~a~~~~~  194 (370)
T cd05621         125 MPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL----DKHGHLKLADFGTCMKMDE  194 (370)
T ss_pred             CCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE----CCCCCEEEEecccceeccc
Confidence            4589999999763  48999999999999999999999999999999999999    7778899999999987643

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.65  E-value=7.3e-16  Score=94.10  Aligned_cols=73  Identities=18%  Similarity=0.256  Sum_probs=63.6

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      |+...++|.+++......+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++++|||+++...
T Consensus        82 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~----~~~~~~kl~DfG~~~~~~  154 (288)
T cd07871          82 FEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLI----NEKGELKLADFGLARAKS  154 (288)
T ss_pred             EeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE----CCCCCEEECcCcceeecc
Confidence            3455679999887765558999999999999999999999999999999999999    667889999999987644

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.65  E-value=8.5e-16  Score=95.19  Aligned_cols=70  Identities=29%  Similarity=0.323  Sum_probs=62.7

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++... ..+++..+..++.|++.++.|+|+++++|+|++++||++    +.+..++|+|||++....
T Consensus        78 ~~~g~L~~~i~~~-~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli----~~~~~~kL~DfG~~~~~~  147 (320)
T cd05590          78 VNGGDLMFHIQKS-RRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLL----DHEGHCKLADFGMCKEGI  147 (320)
T ss_pred             CCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE----CCCCcEEEeeCCCCeecC
Confidence            3578999988876 459999999999999999999999999999999999999    777889999999987644

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.65  E-value=7.3e-16  Score=95.58  Aligned_cols=70  Identities=24%  Similarity=0.303  Sum_probs=62.0

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++... +.+.+..+..++.|++.|+.|+|+.+++|+|+|++||++    +.+..++|+|||+++...
T Consensus        78 ~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili----~~~~~~kl~DfG~a~~~~  147 (325)
T cd05602          78 INGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL----DSQGHIVLTDFGLCKENI  147 (325)
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE----CCCCCEEEccCCCCcccc
Confidence            3578999988775 458899999999999999999999999999999999999    667789999999987543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.65  E-value=3.3e-16  Score=101.69  Aligned_cols=84  Identities=30%  Similarity=0.377  Sum_probs=75.1

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcce
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLN   83 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~~   83 (97)
                      .||++++++.+. +++.+..+...+.|+++++.|||+++++|||||.+|+++    +.+-.+||+|||+...+.. ...-
T Consensus       138 ~~ge~~~yl~~~-gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL----~~~mnikIaDfgfS~~~~~-~~~l  211 (596)
T KOG0586|consen  138 SGGELFDYLVKH-GRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILL----DENMNIKIADFGFSTFFDY-GLML  211 (596)
T ss_pred             cCchhHHHHHhc-ccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccc----ccccceeeeccccceeecc-cccc
Confidence            579999999988 668889999999999999999999999999999999999    7777799999999999885 5555


Q ss_pred             eeccccCccc
Q 038072           84 VTGVGEGQVA   93 (97)
Q Consensus        84 ~~~~~~~~~~   93 (97)
                      .++||++.|+
T Consensus       212 qt~cgsppyA  221 (596)
T KOG0586|consen  212 QTFCGSPPYA  221 (596)
T ss_pred             cccCCCCCcc
Confidence            6889988876

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.65  E-value=9.9e-16  Score=95.15  Aligned_cols=70  Identities=29%  Similarity=0.369  Sum_probs=62.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++... +.+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||++....
T Consensus        78 ~~~~~L~~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili----~~~~~~kl~Dfg~~~~~~  147 (327)
T cd05617          78 VNGGDLMFHMQRQ-RKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLL----DADGHIKLTDYGMCKEGL  147 (327)
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE----eCCCCEEEeccccceecc
Confidence            3588999888765 459999999999999999999999999999999999999    667789999999987543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.65  E-value=1.7e-15  Score=93.95  Aligned_cols=70  Identities=27%  Similarity=0.375  Sum_probs=61.7

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~-~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++... ..+++..+..++.|++.|+.|+|+ .+++|+|+|++||++    ..+..++|+|||+++...
T Consensus        77 ~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll----~~~~~~kL~Dfg~~~~~~  147 (325)
T cd05594          77 ANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML----DKDGHIKITDFGLCKEGI  147 (325)
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEE----CCCCCEEEecCCCCeecC
Confidence            3578998888765 459999999999999999999998 799999999999999    677889999999987644

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.65  E-value=5.5e-16  Score=100.56  Aligned_cols=90  Identities=19%  Similarity=0.212  Sum_probs=72.2

Q ss_pred             CCCCCCCHHHHH-hhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            1 MASSGVNFYNHS-KKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         1 m~~~g~~l~~~l-~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      |+...||+..++ ...++++++...+.+..|++.|++|+|-.+|+|-|+||+|+++... ..-..+|++|||+|++....
T Consensus       642 MEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~-~~FPQvKlCDFGfARiIgEk  720 (888)
T KOG4236|consen  642 MEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASA-SPFPQVKLCDFGFARIIGEK  720 (888)
T ss_pred             ehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccC-CCCCceeeccccceeecchh
Confidence            677788888865 4456889999999999999999999999999999999999999655 45678999999999987643


Q ss_pred             CcceeeccccCcc
Q 038072           80 GLLNVTGVGEGQV   92 (97)
Q Consensus        80 ~~~~~~~~~~~~~   92 (97)
                      . ...+-.|||.|
T Consensus       721 s-FRrsVVGTPAY  732 (888)
T KOG4236|consen  721 S-FRRSVVGTPAY  732 (888)
T ss_pred             h-hhhhhcCCccc
Confidence            2 22333555444

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.65  E-value=9.8e-16  Score=94.93  Aligned_cols=70  Identities=26%  Similarity=0.282  Sum_probs=62.6

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++... +.+++..+..++.|++.|+.|+|+++++|+|++++||++    ..+..++|+|||+++...
T Consensus        83 ~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill----~~~~~~kL~DfG~~~~~~  152 (323)
T cd05616          83 VNGGDLMYQIQQV-GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML----DSEGHIKIADFGMCKENM  152 (323)
T ss_pred             CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEE----CCCCcEEEccCCCceecC
Confidence            3578999988776 459999999999999999999999999999999999999    777889999999997644

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.65  E-value=1.6e-15  Score=92.16  Aligned_cols=72  Identities=19%  Similarity=0.250  Sum_probs=64.6

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ..+++|.+++....+.+++..+..++.|++.++.|+|+.+++|+|++++|+++    +.+..++++|||.++....
T Consensus        90 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili----~~~~~~kl~Dfg~~~~~~~  161 (279)
T cd05111          90 SPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILL----KSDSIVQIADFGVADLLYP  161 (279)
T ss_pred             CCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE----cCCCcEEEcCCccceeccC
Confidence            45789999998765668999999999999999999999999999999999999    6778899999999986543

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.65  E-value=1.1e-15  Score=98.94  Aligned_cols=91  Identities=24%  Similarity=0.279  Sum_probs=73.9

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      |||..-||.++|++....++...++.++.|++.++.++|.++|||.|+||.|+++.     ...+||.|||.|.-.....
T Consensus       439 mE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-----kG~LKLIDFGIA~aI~~DT  513 (677)
T KOG0596|consen  439 MECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-----KGRLKLIDFGIANAIQPDT  513 (677)
T ss_pred             eecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-----eeeEEeeeechhcccCccc
Confidence            78999999999999766566568999999999999999999999999999999984     6789999999997665543


Q ss_pred             cceeeccccCcccccc
Q 038072           81 LLNVTGVGEGQVADIS   96 (97)
Q Consensus        81 ~~~~~~~~~~~~~~~~   96 (97)
                      -.-....-.|++.|||
T Consensus       514 TsI~kdsQvGT~NYMs  529 (677)
T KOG0596|consen  514 TSIVKDSQVGTVNYMS  529 (677)
T ss_pred             cceeeccccCcccccC
Confidence            3322233445677776

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.65  E-value=9.4e-16  Score=95.32  Aligned_cols=70  Identities=26%  Similarity=0.346  Sum_probs=62.1

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|..++... ..+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..++|+|||+++...
T Consensus        77 ~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll----~~~~~~kL~DfG~~~~~~  146 (328)
T cd05593          77 VNGGELFFHLSRE-RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLML----DKDGHIKITDFGLCKEGI  146 (328)
T ss_pred             CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEE----CCCCcEEEecCcCCccCC
Confidence            3578998888765 459999999999999999999999999999999999999    677889999999987643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.65  E-value=9.1e-16  Score=95.07  Aligned_cols=70  Identities=23%  Similarity=0.253  Sum_probs=62.4

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++... +.+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||++....
T Consensus        78 ~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll----~~~~~~kl~Dfg~~~~~~  147 (323)
T cd05575          78 VNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILL----DSQGHVVLTDFGLCKEGI  147 (323)
T ss_pred             CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE----CCCCcEEEeccCCCcccc
Confidence            4578999988775 458999999999999999999999999999999999999    777889999999987543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.65  E-value=3.2e-16  Score=99.23  Aligned_cols=85  Identities=26%  Similarity=0.261  Sum_probs=79.3

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcce
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLN   83 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~~   83 (97)
                      .||||+-.+++- +.+.|+.+..++.+++.++-++|+++|+.||+|.+|+++    +....+||+|||+++.....+...
T Consensus       433 nGGDLMyhiQQ~-GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmL----d~eGHiKi~DFGmcKEni~~~~TT  507 (683)
T KOG0696|consen  433 NGGDLMYHIQQV-GKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML----DSEGHIKIADFGMCKENIFDGVTT  507 (683)
T ss_pred             cCchhhhHHHHh-cccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEe----ccCCceEeeecccccccccCCcce
Confidence            489999998887 559999999999999999999999999999999999999    889999999999999999889899


Q ss_pred             eeccccCccc
Q 038072           84 VTGVGEGQVA   93 (97)
Q Consensus        84 ~~~~~~~~~~   93 (97)
                      .|+||||.|.
T Consensus       508 kTFCGTPdYi  517 (683)
T KOG0696|consen  508 KTFCGTPDYI  517 (683)
T ss_pred             eeecCCCccc
Confidence            9999998875

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.64  E-value=1.2e-15  Score=94.44  Aligned_cols=71  Identities=30%  Similarity=0.308  Sum_probs=62.8

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|..++... ..+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||++.....
T Consensus        78 ~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill----~~~~~~kL~Dfg~~~~~~~  148 (321)
T cd05591          78 VNGGDLMFQIQRS-RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILL----DAEGHCKLADFGMCKEGIL  148 (321)
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE----CCCCCEEEeecccceeccc
Confidence            3578999988775 458999999999999999999999999999999999999    7778899999999876543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.64  E-value=1e-15  Score=95.13  Aligned_cols=69  Identities=30%  Similarity=0.392  Sum_probs=62.1

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      +.|++|.+++... +.+++..+..++.|++.++.|+|+++++|+|++++||++    ..+..++|+|||+++..
T Consensus        78 ~~~g~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili----~~~~~~kL~Dfg~~~~~  146 (329)
T cd05588          78 VSGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLL----DAEGHIKLTDYGMCKEG  146 (329)
T ss_pred             CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE----CCCCCEEECcCcccccc
Confidence            4588999988765 459999999999999999999999999999999999999    66788999999998753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.64  E-value=1.6e-15  Score=94.36  Aligned_cols=55  Identities=24%  Similarity=0.271  Sum_probs=50.1

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072           19 LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        19 l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +++..+..++.|++.|+.|+|+.+++|+|+|++||++    +.+..++|+|||+++...
T Consensus       171 l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~----~~~~~~kl~DfG~a~~~~  225 (338)
T cd05102         171 LTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILL----SENNVVKICDFGLARDIY  225 (338)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEE----cCCCcEEEeecccccccc
Confidence            6778888999999999999999999999999999999    667889999999997653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.64  E-value=1.3e-15  Score=94.50  Aligned_cols=69  Identities=28%  Similarity=0.330  Sum_probs=62.1

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++... +.+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||+++...
T Consensus        84 ~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill----~~~~~ikL~Dfg~~~~~~  152 (323)
T cd05615          84 NGGDLMYHIQQV-GKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVML----DSEGHIKIADFGMCKEHM  152 (323)
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE----CCCCCEEEeccccccccC
Confidence            478999998775 459999999999999999999999999999999999999    677889999999987543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.64  E-value=1.4e-15  Score=94.14  Aligned_cols=69  Identities=26%  Similarity=0.306  Sum_probs=61.9

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      +.|++|.+++... ..+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||+++..
T Consensus        78 ~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~----~~~~~~kl~Dfg~~~~~  146 (316)
T cd05620          78 LNGGDLMFHIQDK-GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVML----DRDGHIKIADFGMCKEN  146 (316)
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE----CCCCCEEeCccCCCeec
Confidence            4578999998775 458999999999999999999999999999999999999    66778999999998754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.64  E-value=1.2e-15  Score=94.61  Aligned_cols=70  Identities=23%  Similarity=0.256  Sum_probs=62.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|..++... ..+++..+..++.|++.|+.|+|+.+++|+|+|++||++    +.+..++|+|||+++...
T Consensus        78 ~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll----~~~~~~kL~DfG~~~~~~  147 (325)
T cd05604          78 VNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILL----DSQGHVVLTDFGLCKEGI  147 (325)
T ss_pred             CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE----CCCCCEEEeecCCcccCC
Confidence            3578998888765 459999999999999999999999999999999999999    777889999999987543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.64  E-value=1.1e-15  Score=94.75  Aligned_cols=72  Identities=24%  Similarity=0.211  Sum_probs=63.9

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      |+..+++|.+++... ..+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..++|+|||+++...
T Consensus        83 ~e~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll----~~~~~~kL~Dfg~~~~~~  154 (338)
T cd07859          83 FELMESDLHQVIKAN-DDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILA----NADCKLKICDFGLARVAF  154 (338)
T ss_pred             EecCCCCHHHHHHhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE----CCCCcEEEccCccccccc
Confidence            456678999998875 459999999999999999999999999999999999999    778889999999997543

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.64  E-value=1.2e-15  Score=97.59  Aligned_cols=67  Identities=19%  Similarity=0.270  Sum_probs=62.0

Q ss_pred             CCCHHHHHhh-cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            5 GVNFYNHSKK-SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         5 g~~l~~~l~~-~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      .|+|.++|+. .+..+.-.....++.||+.|+.|++++++|||||...||++    +++..+||+|||+|+.
T Consensus       285 ~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV----~~~~~vKIsDFGLAr~  352 (468)
T KOG0197|consen  285 KGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILV----DEDLVVKISDFGLARL  352 (468)
T ss_pred             cCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheee----ccCceEEEcccccccc
Confidence            4899999997 44558999999999999999999999999999999999999    8889999999999993

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.64  E-value=1.3e-15  Score=94.28  Aligned_cols=69  Identities=22%  Similarity=0.293  Sum_probs=61.4

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      +.|++|...+... ..+++..+..++.|++.++.|+|+.+++|+|+|++||++    +.+..++|+|||+++..
T Consensus        78 ~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~~~~~  146 (321)
T cd05603          78 VNGGELFFHLQRE-RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILL----DSQGHVVLTDFGLCKEG  146 (321)
T ss_pred             CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE----CCCCCEEEccCCCCccC
Confidence            3578998888765 458999999999999999999999999999999999999    67788999999998754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.64  E-value=1.7e-15  Score=94.24  Aligned_cols=70  Identities=27%  Similarity=0.351  Sum_probs=62.4

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++... +.+++..+..++.|++.++.|+|+++++|+|+|++||++    ..+..++|+|||+++...
T Consensus        78 ~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili----~~~~~~kL~DfG~~~~~~  147 (329)
T cd05618          78 VNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL----DSEGHIKLTDYGMCKEGL  147 (329)
T ss_pred             CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE----CCCCCEEEeeCCcccccc
Confidence            3578999888775 459999999999999999999999999999999999999    777889999999987543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.64  E-value=1.1e-15  Score=94.85  Aligned_cols=70  Identities=27%  Similarity=0.373  Sum_probs=62.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|..++... ..+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||++....
T Consensus        77 ~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~~kL~Dfg~~~~~~  146 (323)
T cd05595          77 ANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML----DKDGHIKITDFGLCKEGI  146 (323)
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE----cCCCCEEecccHHhcccc
Confidence            3578998888775 458999999999999999999999999999999999999    677889999999987543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.63  E-value=1.9e-15  Score=96.07  Aligned_cols=70  Identities=17%  Similarity=0.292  Sum_probs=61.7

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      +..+++|.+++... ..+++..+..++.|++.|+.|+|+++++|+|+||+||++    .....++|+|||+++..
T Consensus       163 e~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll----~~~~~vkL~DFG~a~~~  232 (391)
T PHA03212        163 PRYKTDLYCYLAAK-RNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFI----NHPGDVCLGDFGAACFP  232 (391)
T ss_pred             ecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEE----cCCCCEEEEeCCccccc
Confidence            44568898888765 458999999999999999999999999999999999999    66778999999999653

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.63  E-value=2.4e-15  Score=94.98  Aligned_cols=70  Identities=30%  Similarity=0.343  Sum_probs=62.4

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++..  ..+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..++|+|||++.....
T Consensus       125 ~~gg~L~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll----~~~~~ikL~DfG~a~~~~~  194 (371)
T cd05622         125 MPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL----DKSGHLKLADFGTCMKMNK  194 (371)
T ss_pred             CCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEE----CCCCCEEEEeCCceeEcCc
Confidence            358999999876  348999999999999999999999999999999999999    6678899999999987654

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.63  E-value=2.2e-15  Score=93.41  Aligned_cols=71  Identities=28%  Similarity=0.360  Sum_probs=62.7

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++... +.+.+..+..++.|++.++.|+|+.+++|+|++++||++    +.+..++|+|||+++....
T Consensus        82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~  152 (323)
T cd05584          82 LSGGELFMHLERE-GIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILL----DAQGHVKLTDFGLCKESIH  152 (323)
T ss_pred             CCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE----CCCCCEEEeeCcCCeeccc
Confidence            4578999998775 458899999999999999999999999999999999999    7778899999999875443

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.63  E-value=1.2e-15  Score=98.11  Aligned_cols=70  Identities=26%  Similarity=0.286  Sum_probs=64.4

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      ..|||+..+|... +.|++..++.++.+++.|+.-+|+.|++|||+||+|+++    +....+|+.|||++.-..
T Consensus       223 lPGGD~mTLL~~~-~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLi----D~~GHiKLSDFGLs~gl~  292 (550)
T KOG0605|consen  223 LPGGDMMTLLMRK-DTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLI----DAKGHIKLSDFGLSTGLD  292 (550)
T ss_pred             cCCccHHHHHHhc-CcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheee----cCCCCEeeccccccchhh
Confidence            3699999999887 559999999999999999999999999999999999999    889999999999996444

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.63  E-value=1.1e-15  Score=99.06  Aligned_cols=86  Identities=19%  Similarity=0.231  Sum_probs=73.9

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcce
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLN   83 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~~   83 (97)
                      .||||++++-+....+.|..++.++.||+.|+.|||.-.++|||+||+|+++.   ..-..+|+.|||+.-.+.+..++ 
T Consensus       100 D~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFF---EKlGlVKLTDFGFSNkf~PG~kL-  175 (864)
T KOG4717|consen  100 DGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFF---EKLGLVKLTDFGFSNKFQPGKKL-  175 (864)
T ss_pred             CCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEe---eecCceEeeeccccccCCCcchh-
Confidence            47899999988777799999999999999999999999999999999999885   33578999999999988885544 


Q ss_pred             eeccccCccc
Q 038072           84 VTGVGEGQVA   93 (97)
Q Consensus        84 ~~~~~~~~~~   93 (97)
                      .|+||+-.|.
T Consensus       176 ~TsCGSLAYS  185 (864)
T KOG4717|consen  176 TTSCGSLAYS  185 (864)
T ss_pred             hcccchhhcc
Confidence            5778766553

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.63  E-value=1.6e-15  Score=95.30  Aligned_cols=71  Identities=20%  Similarity=0.263  Sum_probs=62.9

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      +...++|.+++......+++..+..++.|++.|+.|+|+++++|+|+|++||++    .....++|+|||+++..
T Consensus       137 e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill----~~~~~~kl~DfG~a~~~  207 (357)
T PHA03209        137 PHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFI----NDVDQVCIGDLGAAQFP  207 (357)
T ss_pred             EccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----CCCCCEEEecCcccccc
Confidence            344678999887765669999999999999999999999999999999999999    67788999999999753

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.63  E-value=3.1e-15  Score=97.17  Aligned_cols=71  Identities=25%  Similarity=0.206  Sum_probs=62.1

Q ss_pred             CCCCHHHHHhhc---ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKS---AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~---~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++...   ...+++..+..++.|++.++.|+|+++++|+|+|++||++    .....++|+|||+++....
T Consensus       148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll----~~~~~~kL~DFgla~~~~~  221 (478)
T PTZ00267        148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFL----MPTGIIKLGDFGFSKQYSD  221 (478)
T ss_pred             CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEE----CCCCcEEEEeCcCceecCC
Confidence            589999887642   2348899999999999999999999999999999999999    6778899999999987654

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.63  E-value=2.5e-15  Score=91.57  Aligned_cols=74  Identities=23%  Similarity=0.274  Sum_probs=63.6

Q ss_pred             CCCCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+..+++|.+++.... ..+++..+..++.|++.|+.|+|+++++|+|++++||++    ..+..++++|||++.....
T Consensus        88 ~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~  162 (290)
T cd07862          88 FEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV----TSSGQIKLADFGLARIYSF  162 (290)
T ss_pred             EccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE----cCCCCEEEccccceEeccC
Confidence            3455678999887642 348999999999999999999999999999999999999    6678899999999987554

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.62  E-value=1.3e-15  Score=95.99  Aligned_cols=69  Identities=28%  Similarity=0.246  Sum_probs=62.2

Q ss_pred             CCHHHHHhhccc-ccCHHHHHHHHHHHHHHHHHHHHc---CccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            6 VNFYNHSKKSAK-ILLEHEVRRYTRDILRGLDHIHSH---GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         6 ~~l~~~l~~~~~-~l~~~~~~~~~~~i~~~l~~~h~~---~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+|.+.+..... .++|.....++.+++.|+.|+|..   .|+|||+|++||++    +.+...||+|||+|+....
T Consensus       157 GsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL----D~~~~aKlsDFGLa~~~~~  229 (361)
T KOG1187|consen  157 GSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL----DEDFNAKLSDFGLAKLGPE  229 (361)
T ss_pred             CCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE----CCCCCEEccCccCcccCCc
Confidence            799999987655 799999999999999999999984   49999999999999    8899999999999966543

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.62  E-value=3.2e-15  Score=94.32  Aligned_cols=70  Identities=30%  Similarity=0.341  Sum_probs=62.5

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.||+|.+++..  ..+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||++.....
T Consensus       125 ~~gg~L~~~l~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl----~~~~~~kL~DfG~~~~~~~  194 (370)
T cd05596         125 MPGGDLVNLMSN--YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL----DKSGHLKLADFGTCMKMDA  194 (370)
T ss_pred             CCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE----cCCCCEEEEeccceeeccC
Confidence            358999999876  348899999999999999999999999999999999999    7788999999999987654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.62  E-value=2.9e-15  Score=93.11  Aligned_cols=71  Identities=24%  Similarity=0.302  Sum_probs=63.4

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++... +.+++..+..++.|++.++.|+|+++++|+|++++||++    +....++|+|||++.....
T Consensus        83 ~~g~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~----~~~~~~kL~Dfg~a~~~~~  153 (333)
T cd05600          83 VPGGDFRTLLNNL-GVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLI----DASGHIKLTDFGLSKGIVT  153 (333)
T ss_pred             CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE----CCCCCEEEEeCcCCccccc
Confidence            4589999999875 458999999999999999999999999999999999999    6778899999999976543

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.62  E-value=1.9e-15  Score=95.06  Aligned_cols=69  Identities=29%  Similarity=0.307  Sum_probs=62.5

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      +.||+|.+++.+. +.+++..++.++.|++.|+.|+|+++++|+|+|++||++    +.+..++|+|||+++..
T Consensus        83 ~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi----~~~~~vkL~DFGla~~~  151 (363)
T cd05628          83 LPGGDMMTLLMKK-DTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLL----DSKGHVKLSDFGLCTGL  151 (363)
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE----CCCCCEEEeeccCcccc
Confidence            3589999999876 459999999999999999999999999999999999999    66788999999998754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.62  E-value=2.8e-15  Score=93.70  Aligned_cols=70  Identities=19%  Similarity=0.229  Sum_probs=63.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++... +.+++..+..++.|++.++.|+|+.+++|+|++++||++    +.+..++|+|||++....
T Consensus       113 ~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl----~~~~~ikL~DFG~a~~~~  182 (340)
T PTZ00426        113 VIGGEFFTFLRRN-KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLL----DKDGFIKMTDFGFAKVVD  182 (340)
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE----CCCCCEEEecCCCCeecC
Confidence            3588999999876 459999999999999999999999999999999999999    677889999999998654

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.62  E-value=3.5e-15  Score=91.99  Aligned_cols=78  Identities=22%  Similarity=0.201  Sum_probs=63.2

Q ss_pred             CCCCCCCHHHHHhhc--------ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCc
Q 038072            1 MASSGVNFYNHSKKS--------AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGD   72 (97)
Q Consensus         1 m~~~g~~l~~~l~~~--------~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~   72 (97)
                      |+..+++|.+++...        ...+++..++.++.|++.|+.|+|+++++|+|+|++||++.........+||+|||+
T Consensus        79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~  158 (317)
T cd07868          79 FDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF  158 (317)
T ss_pred             EeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence            355677888877532        123899999999999999999999999999999999999954333456799999999


Q ss_pred             eeeecc
Q 038072           73 KCLHER   78 (97)
Q Consensus        73 a~~~~~   78 (97)
                      ++....
T Consensus       159 a~~~~~  164 (317)
T cd07868         159 ARLFNS  164 (317)
T ss_pred             eeccCC
Confidence            987543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.62  E-value=3.2e-15  Score=94.48  Aligned_cols=68  Identities=25%  Similarity=0.279  Sum_probs=61.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      +.||+|.+++.+. +.+++..++.++.|++.|+.|+|+.+++|+|+|++||++    +.+..++|+|||++..
T Consensus        83 ~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl----~~~g~~kL~DFGla~~  150 (382)
T cd05625          83 IPGGDMMSLLIRM-GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILI----DRDGHIKLTDFGLCTG  150 (382)
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----CCCCCEEEeECCCCcc
Confidence            3578999998775 458999999999999999999999999999999999999    7778899999999753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.62  E-value=3.1e-15  Score=92.50  Aligned_cols=72  Identities=28%  Similarity=0.381  Sum_probs=63.5

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.|++|.+++.+. ..+++..+..++.|++.++.|+|+.+++|+|++++||++    +.+..++|+|||++......
T Consensus        80 ~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~kL~Dfg~~~~~~~~  151 (318)
T cd05582          80 LRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL----DEEGHIKLTDFGLSKESIDH  151 (318)
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEE----CCCCcEEEeeccCCcccCCC
Confidence            3578999998765 459999999999999999999999999999999999999    67788999999998765443

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.62  E-value=2e-15  Score=90.20  Aligned_cols=86  Identities=21%  Similarity=0.261  Sum_probs=66.4

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcce
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLN   83 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~~   83 (97)
                      .|++|..-+-.. -.++|..+.-+++|++.++.|||.++|+|||+||+|+++... .....+|++|||+|.... .+...
T Consensus        93 ~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK-~~~A~vKL~~FGvAi~l~-~g~~~  169 (355)
T KOG0033|consen   93 TGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASK-AKGAAVKLADFGLAIEVN-DGEAW  169 (355)
T ss_pred             cchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeec-cCCCceeecccceEEEeC-Ccccc
Confidence            356665544332 337899999999999999999999999999999999999655 556789999999999887 44444


Q ss_pred             eeccccCcc
Q 038072           84 VTGVGEGQV   92 (97)
Q Consensus        84 ~~~~~~~~~   92 (97)
                      ..+.|+|.|
T Consensus       170 ~G~~GtP~f  178 (355)
T KOG0033|consen  170 HGFAGTPGY  178 (355)
T ss_pred             ccccCCCcc
Confidence            445555443

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.61  E-value=4.9e-15  Score=91.70  Aligned_cols=69  Identities=29%  Similarity=0.344  Sum_probs=61.9

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      +.|++|.+++... ..+++..+..++.|++.|+.|+|+++++|+|++++||++    ..+..++|+|||++...
T Consensus        78 ~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~----~~~~~~kl~Dfg~~~~~  146 (316)
T cd05619          78 LNGGDLMFHIQSC-HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILL----DTDGHIKIADFGMCKEN  146 (316)
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE----CCCCCEEEccCCcceEC
Confidence            3589999999875 458999999999999999999999999999999999999    66788999999998754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.61  E-value=4.1e-15  Score=97.03  Aligned_cols=72  Identities=24%  Similarity=0.261  Sum_probs=62.5

Q ss_pred             CCCCCHHHHHhhc---ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKS---AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~---~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.+|+|.+++...   ...+++..+..++.|++.++.|+|+.+++|+|+||+||++    ..+..++|+|||+++....
T Consensus       121 ~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl----~~~~~vkL~DFGls~~~~~  195 (496)
T PTZ00283        121 ANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILL----CSNGLVKLGDFGFSKMYAA  195 (496)
T ss_pred             CCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE----eCCCCEEEEecccCeeccc
Confidence            3578999988653   2348999999999999999999999999999999999999    6678899999999986543

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.61  E-value=4e-15  Score=93.39  Aligned_cols=70  Identities=30%  Similarity=0.315  Sum_probs=63.0

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++... +.+++..+..++.|++.|+.|+|+.+++|+|+|++||++    +.+..++++|||++....
T Consensus        83 ~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~----~~~~~~kl~Dfg~~~~~~  152 (364)
T cd05599          83 LPGGDMMTLLMKK-DTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLL----DAKGHIKLSDFGLCTGLK  152 (364)
T ss_pred             CCCcHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE----CCCCCEEEeecccceecc
Confidence            4589999998875 459999999999999999999999999999999999999    778889999999987543

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.61  E-value=2e-15  Score=99.85  Aligned_cols=86  Identities=17%  Similarity=0.195  Sum_probs=76.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      |.||.+.-++-+....+.+.+++.++++++.|+.|+|+++|+|||+|..||++    +-+..++++|||.+.......+.
T Consensus       111 C~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~----TldGdirLADFGVSAKn~~t~qk  186 (1187)
T KOG0579|consen  111 CGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILL----TLDGDIRLADFGVSAKNKSTRQK  186 (1187)
T ss_pred             cCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEE----EecCcEeeecccccccchhHHhh
Confidence            67888888887776779999999999999999999999999999999999999    77899999999998877776777


Q ss_pred             eeeccccCcc
Q 038072           83 NVTGVGEGQV   92 (97)
Q Consensus        83 ~~~~~~~~~~   92 (97)
                      ..++.|+|+.
T Consensus       187 RDsFIGTPYW  196 (1187)
T KOG0579|consen  187 RDSFIGTPYW  196 (1187)
T ss_pred             hccccCCccc
Confidence            7788887653

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.60  E-value=5.1e-15  Score=92.05  Aligned_cols=71  Identities=18%  Similarity=0.261  Sum_probs=63.6

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++... +.+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||++.....
T Consensus       100 ~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll----~~~~~~kl~Dfg~~~~~~~  170 (329)
T PTZ00263        100 VVGGELFTHLRKA-GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLL----DNKGHVKVTDFGFAKKVPD  170 (329)
T ss_pred             CCCChHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE----CCCCCEEEeeccCceEcCC
Confidence            4688999999876 458999999999999999999999999999999999999    7778899999999986543

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.60  E-value=8.4e-16  Score=93.18  Aligned_cols=72  Identities=25%  Similarity=0.374  Sum_probs=60.6

Q ss_pred             CHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcce
Q 038072            7 NFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLN   83 (97)
Q Consensus         7 ~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~~   83 (97)
                      ||..++-.- +.++.+.++.++.|++.|++|+|+.+|+|||+||.|+++    +.+..+||+|||+|+.-+......
T Consensus       142 DLHKIIVSP-Q~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLV----NSNCvLKICDFGLARvee~d~~~h  213 (449)
T KOG0664|consen  142 DLHKIIVSP-QALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLV----NSNCILKICDFGLARTWDQRDRLN  213 (449)
T ss_pred             hhhheeccC-CCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEe----ccCceEEecccccccccchhhhhh
Confidence            444444333 558999999999999999999999999999999999999    889999999999999766544443

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.60  E-value=4.6e-15  Score=91.99  Aligned_cols=69  Identities=25%  Similarity=0.306  Sum_probs=61.1

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|..++..  ..+++..+..++.|++.|+.|+|+.+++|+|++++||++    +.+..++|+|||++....
T Consensus        84 ~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill----~~~~~~kL~Dfg~~~~~~  152 (324)
T cd05589          84 AAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLL----DTEGFVKIADFGLCKEGM  152 (324)
T ss_pred             CCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE----CCCCcEEeCcccCCccCC
Confidence            457888888765  459999999999999999999999999999999999999    777899999999987543

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.60  E-value=1.1e-14  Score=88.40  Aligned_cols=72  Identities=13%  Similarity=0.131  Sum_probs=64.6

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ..+++|.+++......+++..+..++.|++.++.|+|+++++|+|++++|+++    .....++++|||.++....
T Consensus        90 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~----~~~~~~kL~dfg~~~~~~~  161 (279)
T cd05057          90 MPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLDV  161 (279)
T ss_pred             CCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEE----cCCCeEEECCCcccccccC
Confidence            45789999998865669999999999999999999999999999999999999    6678899999999986553

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.60  E-value=9.8e-15  Score=89.05  Aligned_cols=71  Identities=20%  Similarity=0.192  Sum_probs=61.5

Q ss_pred             CCCCCHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKS-AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~-~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++... ...+++..+..++.|++.|+.|+|+.+++|+|++++||++    ..+..++|+|||++....
T Consensus        82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill----~~~~~~kl~Dfg~~~~~~  153 (285)
T cd05631          82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILL----DDRGHIRISDLGLAVQIP  153 (285)
T ss_pred             cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE----CCCCCEEEeeCCCcEEcC
Confidence            4578998877643 2348999999999999999999999999999999999999    667889999999998654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.60  E-value=7.3e-15  Score=90.94  Aligned_cols=70  Identities=30%  Similarity=0.361  Sum_probs=62.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|..++... +.+++..+..++.|++.++.|+|+.+++|+|++++||++    ..+..++|+|||+++...
T Consensus        78 ~~~~~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill----~~~~~~kl~Dfg~~~~~~  147 (318)
T cd05570          78 VNGGDLMFHIQRS-GRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLL----DSEGHIKIADFGMCKEGI  147 (318)
T ss_pred             CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEE----CCCCcEEecccCCCeecC
Confidence            3578999888775 459999999999999999999999999999999999999    677889999999987543

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.59  E-value=6.8e-15  Score=90.03  Aligned_cols=70  Identities=21%  Similarity=0.224  Sum_probs=62.8

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++... +.+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||++....
T Consensus        83 ~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli----~~~~~~kl~Dfg~~~~~~  152 (291)
T cd05612          83 VPGGELFSYLRNS-GRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILL----DKEGHIKLTDFGFAKKLR  152 (291)
T ss_pred             CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE----CCCCCEEEEecCcchhcc
Confidence            4578999999876 458999999999999999999999999999999999999    667889999999987654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.59  E-value=7.3e-15  Score=91.61  Aligned_cols=71  Identities=25%  Similarity=0.336  Sum_probs=62.6

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +..|++|.+++..  +.+++..+..++.|++.|+.|+|+++++|+|++++||++    ..+..++|+|||+++....
T Consensus       100 ~~~~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~----~~~~~~kl~Dfg~~~~~~~  170 (343)
T cd07878         100 NLMGADLNNIVKC--QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAV----NEDCELRILDFGLARQADD  170 (343)
T ss_pred             ecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEE----CCCCCEEEcCCccceecCC
Confidence            4567888888764  459999999999999999999999999999999999999    7778899999999986543

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.59  E-value=1e-14  Score=89.42  Aligned_cols=67  Identities=27%  Similarity=0.343  Sum_probs=56.5

Q ss_pred             CCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            6 VNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         6 ~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .++.+.+... ...++..+..++.|++.++.|+|+.+++|||+||+||++    +....++|+|||+|+...
T Consensus       111 ~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill----~~~~~~~l~DFGla~~~~  177 (294)
T PHA02882        111 ENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMV----DGNNRGYIIDYGIASHFI  177 (294)
T ss_pred             cCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCcEEEEEcCCceeec
Confidence            4555555543 336788899999999999999999999999999999999    667789999999998764

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.59  E-value=6.8e-15  Score=94.78  Aligned_cols=74  Identities=23%  Similarity=0.209  Sum_probs=60.9

Q ss_pred             CCCCCCCHHHHHhh---cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCC-CceEEEeecCceeee
Q 038072            1 MASSGVNFYNHSKK---SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDA-GFMAKIVARGDKCLH   76 (97)
Q Consensus         1 m~~~g~~l~~~l~~---~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~-~~~~~i~dfg~a~~~   76 (97)
                      |+..++++.+++..   ....+++..++.++.|++.|+.|+|+++++|||+|++||++    .. ...+||+|||+|+..
T Consensus       146 mE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl----~~~~~~vkL~DFGla~~~  221 (440)
T PTZ00036        146 MEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLI----DPNTHTLKLCDFGSAKNL  221 (440)
T ss_pred             EecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEE----cCCCCceeeeccccchhc
Confidence            45556778777653   23458999999999999999999999999999999999999    43 346999999999865


Q ss_pred             cc
Q 038072           77 ER   78 (97)
Q Consensus        77 ~~   78 (97)
                      ..
T Consensus       222 ~~  223 (440)
T PTZ00036        222 LA  223 (440)
T ss_pred             cC
Confidence            43

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.59  E-value=2.2e-15  Score=96.16  Aligned_cols=54  Identities=35%  Similarity=0.521  Sum_probs=51.8

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072           19 LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus        19 l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      +++.+++.+++.++.||.|+|.++++|||+||+|+++    .+...+||+|||.+...
T Consensus       207 ls~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl----~~~g~VKIsDFGVs~~~  260 (576)
T KOG0585|consen  207 LSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLL----SSDGTVKISDFGVSNEF  260 (576)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEE----cCCCcEEeeccceeeec
Confidence            8899999999999999999999999999999999999    78899999999999876

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.59  E-value=7.4e-15  Score=91.63  Aligned_cols=72  Identities=28%  Similarity=0.355  Sum_probs=64.4

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.|++|.+++... +.+++..+..++.|++.|+.|+|+.+++|+|++++||++    ..+..++|+|||++......
T Consensus        83 ~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll----~~~~~~kL~Dfg~~~~~~~~  154 (350)
T cd05573          83 MPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILI----DADGHIKLADFGLCKKMNKA  154 (350)
T ss_pred             CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE----CCCCCEEeecCCCCccCccc
Confidence            3588999999876 569999999999999999999999999999999999999    77788999999999765543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.59  E-value=8.3e-15  Score=90.19  Aligned_cols=73  Identities=22%  Similarity=0.266  Sum_probs=63.6

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      |+...++|.+++...+..+++..+..++.|++.++.|+|+++++|+|++++||++    +....++|+|||++....
T Consensus        83 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill----~~~~~~kl~Dfg~~~~~~  155 (309)
T cd07872          83 FEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLI----NERGELKLADFGLARAKS  155 (309)
T ss_pred             EeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----CCCCCEEECccccceecC
Confidence            4455678988887765558999999999999999999999999999999999999    667889999999987643

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.58  E-value=2.7e-15  Score=95.57  Aligned_cols=85  Identities=24%  Similarity=0.282  Sum_probs=69.7

Q ss_pred             CCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcce
Q 038072            5 GVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLN   83 (97)
Q Consensus         5 g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~~   83 (97)
                      ||||.-.+.... ..|+++.+..++.+|+.|+.++|+++|+.||+||+||++    ++...++|+|+|+|..+.......
T Consensus       269 GGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILL----Dd~GhvRISDLGLAvei~~g~~~~  344 (591)
T KOG0986|consen  269 GGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILL----DDHGHVRISDLGLAVEIPEGKPIR  344 (591)
T ss_pred             CCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheee----ccCCCeEeeccceEEecCCCCccc
Confidence            788877776643 349999999999999999999999999999999999999    889999999999998776543322


Q ss_pred             eeccccCcccccc
Q 038072           84 VTGVGEGQVADIS   96 (97)
Q Consensus        84 ~~~~~~~~~~~~~   96 (97)
                       ..  .|+..||+
T Consensus       345 -~r--vGT~GYMA  354 (591)
T KOG0986|consen  345 -GR--VGTVGYMA  354 (591)
T ss_pred             -cc--cCcccccC
Confidence             22  45666664

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.58  E-value=7.5e-15  Score=92.70  Aligned_cols=68  Identities=26%  Similarity=0.307  Sum_probs=61.5

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      +.|++|.+++... +.+++..+..++.|++.|+.|+|+.+++|+|+|++||++    ..+..++++|||+++.
T Consensus        83 ~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll----~~~~~~kl~DfGla~~  150 (377)
T cd05629          83 LPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILI----DRGGHIKLSDFGLSTG  150 (377)
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE----CCCCCEEEeecccccc
Confidence            3589999999875 458999999999999999999999999999999999999    6678899999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.58  E-value=1.3e-14  Score=89.10  Aligned_cols=72  Identities=14%  Similarity=0.132  Sum_probs=63.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ..+|+|.+++......+++..+..++.|++.++.|+|+++++|+|++++||++    ..+..++++|||+++....
T Consensus        90 ~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill----~~~~~~kL~Dfg~~~~~~~  161 (303)
T cd05110          90 MPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLV----KSPNHVKITDFGLARLLEG  161 (303)
T ss_pred             cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeee----cCCCceEEccccccccccC
Confidence            34688999988765568999999999999999999999999999999999999    6667899999999986543

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.58  E-value=3.5e-15  Score=97.35  Aligned_cols=83  Identities=23%  Similarity=0.269  Sum_probs=69.8

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc--CccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSH--GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGL   81 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~--~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~   81 (97)
                      .+|+|..|+++. +++..+.++.|++||+.||.|+|++  .|+|||+|-+||+++   .....+||.|+|+|........
T Consensus       126 TSGtLr~Y~kk~-~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin---G~~G~VKIGDLGLAtl~r~s~a  201 (632)
T KOG0584|consen  126 TSGTLREYRKKH-RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN---GNLGEVKIGDLGLATLLRKSHA  201 (632)
T ss_pred             cCCcHHHHHHHh-ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc---CCcCceeecchhHHHHhhcccc
Confidence            469999999997 4589999999999999999999998  699999999999995   4568899999999988776554


Q ss_pred             ceeeccccCcc
Q 038072           82 LNVTGVGEGQV   92 (97)
Q Consensus        82 ~~~~~~~~~~~   92 (97)
                      ..  ..|||.+
T Consensus       202 ks--vIGTPEF  210 (632)
T KOG0584|consen  202 KS--VIGTPEF  210 (632)
T ss_pred             ce--eccCccc
Confidence            43  3566554

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.58  E-value=1.7e-14  Score=87.78  Aligned_cols=72  Identities=24%  Similarity=0.289  Sum_probs=61.5

Q ss_pred             CCCCCHHHHHhh---cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKK---SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~---~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++..   ....+++..+..++.|++.++.|+|+.+++|+|++++||++    +.+..++++|||++.....
T Consensus        75 ~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili----~~~~~~~l~dfg~~~~~~~  149 (280)
T cd05608          75 MNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLL----DNDGNVRISDLGLAVELKD  149 (280)
T ss_pred             CCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCCEEEeeCccceecCC
Confidence            457899887743   22448999999999999999999999999999999999999    6677899999999976544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.58  E-value=1.8e-14  Score=88.50  Aligned_cols=72  Identities=13%  Similarity=0.079  Sum_probs=60.5

Q ss_pred             CCCCCHHHHHhhcc------------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCce
Q 038072            3 SSGVNFYNHSKKSA------------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFM   64 (97)
Q Consensus         3 ~~g~~l~~~l~~~~------------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~   64 (97)
                      +.+++|.+++....                  ..+++..+..++.|++.|+.|+|+.+++|+|++++||++    ..+..
T Consensus       101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill----~~~~~  176 (304)
T cd05096         101 MENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLV----GENLT  176 (304)
T ss_pred             CCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEE----cCCcc
Confidence            35789998886531                  125778889999999999999999999999999999999    67788


Q ss_pred             EEEeecCceeeecc
Q 038072           65 AKIVARGDKCLHER   78 (97)
Q Consensus        65 ~~i~dfg~a~~~~~   78 (97)
                      ++|+|||+++....
T Consensus       177 ~kl~DfG~~~~~~~  190 (304)
T cd05096         177 IKIADFGMSRNLYA  190 (304)
T ss_pred             EEECCCccceeccc
Confidence            99999999976543

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.58  E-value=7.1e-15  Score=98.01  Aligned_cols=89  Identities=24%  Similarity=0.222  Sum_probs=75.8

Q ss_pred             CCCCCHHHHHhhccccc--CHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            3 SSGVNFYNHSKKSAKIL--LEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l--~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      ..||+|.++++..=+++  .|...-.+..||+.|++|+|...|+|||+|-+|++++   +....+||+|||.+++...-.
T Consensus       654 VPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN---TySGvlKISDFGTsKRLAgin  730 (1226)
T KOG4279|consen  654 VPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN---TYSGVLKISDFGTSKRLAGIN  730 (1226)
T ss_pred             CCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe---eccceEEecccccchhhccCC
Confidence            46999999999765666  6788899999999999999999999999999999996   567899999999999887766


Q ss_pred             cceeeccccCcccccc
Q 038072           81 LLNVTGVGEGQVADIS   96 (97)
Q Consensus        81 ~~~~~~~~~~~~~~~~   96 (97)
                      ....|+.  |+..||+
T Consensus       731 P~TETFT--GTLQYMA  744 (1226)
T KOG4279|consen  731 PCTETFT--GTLQYMA  744 (1226)
T ss_pred             ccccccc--cchhhhC
Confidence            6666665  4666664

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.58  E-value=1.6e-14  Score=91.30  Aligned_cols=56  Identities=25%  Similarity=0.338  Sum_probs=50.8

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           19 LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        19 l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..++|+|||+++....
T Consensus       209 l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~----~~~~~~kL~DfGla~~~~~  264 (374)
T cd05106         209 LDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLL----TDGRVAKICDFGLARDIMN  264 (374)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEE----eCCCeEEEeeceeeeeccC
Confidence            6788899999999999999999999999999999999    6677899999999976543

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.58  E-value=9.4e-15  Score=91.77  Aligned_cols=69  Identities=29%  Similarity=0.289  Sum_probs=62.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      +.|++|.+++.+. +.+++..++.++.|++.++.|+|+.+++|+|+|++||++    ..+..++|+|||++...
T Consensus        83 ~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli----~~~~~vkL~DfG~~~~~  151 (360)
T cd05627          83 LPGGDMMTLLMKK-DTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLL----DAKGHVKLSDFGLCTGL  151 (360)
T ss_pred             CCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE----CCCCCEEEeeccCCccc
Confidence            4588999999875 459999999999999999999999999999999999999    67788999999998754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.57  E-value=1.1e-14  Score=91.91  Aligned_cols=68  Identities=25%  Similarity=0.278  Sum_probs=61.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      +.|++|.+++... +.+++..+..++.|++.|+.|+|+++++|+|+|++||++    ..+..++|+|||+|..
T Consensus        83 ~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill----~~~~~ikL~DFG~a~~  150 (376)
T cd05598          83 IPGGDMMSLLIRL-GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI----DRDGHIKLTDFGLCTG  150 (376)
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEE----CCCCCEEEEeCCCCcc
Confidence            4589999999876 458999999999999999999999999999999999999    7778899999999853

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.57  E-value=8e-15  Score=95.65  Aligned_cols=85  Identities=21%  Similarity=0.221  Sum_probs=70.8

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcce
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLN   83 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~~   83 (97)
                      .-|+|..++... +.++|+.++.+..+++.|+.|+|+.+++|+|.||.||++    .....+|++|||+|+-.......-
T Consensus        83 a~g~L~~il~~d-~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl----~~~~~~KlcdFg~Ar~m~~~t~vl  157 (808)
T KOG0597|consen   83 AVGDLFTILEQD-GKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILL----EKGGTLKLCDFGLARAMSTNTSVL  157 (808)
T ss_pred             hhhhHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeee----cCCCceeechhhhhhhcccCceee
Confidence            346999999987 559999999999999999999999999999999999999    788999999999999776644433


Q ss_pred             eeccccCccccc
Q 038072           84 VTGVGEGQVADI   95 (97)
Q Consensus        84 ~~~~~~~~~~~~   95 (97)
                      ...-|+  +.||
T Consensus       158 tsikGt--PlYm  167 (808)
T KOG0597|consen  158 TSIKGT--PLYM  167 (808)
T ss_pred             eeccCc--cccc
Confidence            333444  4444

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.57  E-value=3.9e-15  Score=92.54  Aligned_cols=85  Identities=27%  Similarity=0.308  Sum_probs=77.3

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcce
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLN   83 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~~   83 (97)
                      .||||+-...+. ..++++.+..+..+++.|+.|+|+++++.||+|.+|+++    +....+|+.|+|+++.....+...
T Consensus       334 ~ggdlmfhmqrq-rklpeeharfys~ei~lal~flh~rgiiyrdlkldnvll----daeghikltdygmcke~l~~gd~t  408 (593)
T KOG0695|consen  334 NGGDLMFHMQRQ-RKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLL----DAEGHIKLTDYGMCKEGLGPGDTT  408 (593)
T ss_pred             cCcceeeehhhh-hcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEE----ccCCceeecccchhhcCCCCCccc
Confidence            478888877765 349999999999999999999999999999999999999    888999999999999999999999


Q ss_pred             eeccccCccc
Q 038072           84 VTGVGEGQVA   93 (97)
Q Consensus        84 ~~~~~~~~~~   93 (97)
                      .|+||+|-|.
T Consensus       409 stfcgtpnyi  418 (593)
T KOG0695|consen  409 STFCGTPNYI  418 (593)
T ss_pred             ccccCCCccc
Confidence            9999988765

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.57  E-value=2.8e-14  Score=86.03  Aligned_cols=71  Identities=14%  Similarity=0.172  Sum_probs=64.0

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      ..+++|.+++....+.+++..+..++.+++.++.++|+++++|+|++++||++    +.+..++++|||++....
T Consensus        87 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili----~~~~~~~l~dfg~~~~~~  157 (266)
T cd05033          87 MENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILV----NSNLVCKVSDFGLSRRLE  157 (266)
T ss_pred             CCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE----cCCCCEEECccchhhccc
Confidence            34789999998765668999999999999999999999999999999999999    777889999999998765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.57  E-value=1.7e-14  Score=87.71  Aligned_cols=73  Identities=23%  Similarity=0.322  Sum_probs=62.4

Q ss_pred             CCCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +...++|.+++.... ..+++..+..++.|++.|+.|+|+.+++|+|++++||++    ..+..++++|||++.....
T Consensus        87 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili----~~~~~~kl~dfg~~~~~~~  160 (288)
T cd07863          87 EHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV----TSGGQVKLADFGLARIYSC  160 (288)
T ss_pred             cccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----CCCCCEEECccCccccccC
Confidence            444568888887643 338999999999999999999999999999999999999    6678899999999976543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.57  E-value=1e-14  Score=96.34  Aligned_cols=69  Identities=25%  Similarity=0.288  Sum_probs=63.9

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|||++++|-+. +.|.|..+++++.++..|+.+.|+.|+||||+|++||++    +.+..+|+.|||+|.-+.
T Consensus       712 PGGDmMSLLIrm-gIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILI----DrdGHIKLTDFGLCTGfR  780 (1034)
T KOG0608|consen  712 PGGDMMSLLIRM-GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI----DRDGHIKLTDFGLCTGFR  780 (1034)
T ss_pred             CCccHHHHHHHh-ccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEE----ccCCceeeeeccccccce
Confidence            589999998887 679999999999999999999999999999999999999    889999999999996443

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.56  E-value=9.6e-15  Score=101.50  Aligned_cols=89  Identities=26%  Similarity=0.281  Sum_probs=72.6

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      |.||+|.+++... +..++...+.+..|++.|+.|+|+++|||||+|+.||++    +.+..+|..|||.|....++-+.
T Consensus      1316 C~~GsLa~ll~~g-ri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~L----d~~g~iK~~DFGsa~ki~~~~~~ 1390 (1509)
T KOG4645|consen 1316 CEGGSLASLLEHG-RIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILL----DFNGLIKYGDFGSAVKIKNNAQT 1390 (1509)
T ss_pred             hccCcHHHHHHhc-chhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceee----ecCCcEEeecccceeEecCchhc
Confidence            6799999999875 447888889999999999999999999999999999999    77789999999999987765321


Q ss_pred             e--eeccccCcccccc
Q 038072           83 N--VTGVGEGQVADIS   96 (97)
Q Consensus        83 ~--~~~~~~~~~~~~~   96 (97)
                      .  .-...-|+.+||+
T Consensus      1391 ~~~el~~~~GT~~YMA 1406 (1509)
T KOG4645|consen 1391 MPGELQSMMGTPMYMA 1406 (1509)
T ss_pred             CCHHHHhhcCCchhcC
Confidence            1  1112345667774

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.56  E-value=2.2e-14  Score=86.62  Aligned_cols=69  Identities=19%  Similarity=0.201  Sum_probs=59.4

Q ss_pred             CCCCHHHHHhhccc----ccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            4 SGVNFYNHSKKSAK----ILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         4 ~g~~l~~~l~~~~~----~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      .+++|.+++.....    .+++..+..++.|++.++.|+|+++++|+|+|++|+++    +.+..++++|||++...
T Consensus        78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill----~~~~~~kl~dfg~~~~~  150 (269)
T cd05042          78 PLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQL----TADLSVKIGDYGLALEQ  150 (269)
T ss_pred             CCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEe----cCCCcEEEecccccccc
Confidence            47899999876432    24677888999999999999999999999999999999    77788999999998653

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.56  E-value=1.6e-14  Score=90.48  Aligned_cols=70  Identities=21%  Similarity=0.264  Sum_probs=59.1

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +...+++.+.+..   .+++..+..++.|++.|+.|+|+++++|+|+|++||++    ..+..++|+|||+++....
T Consensus       102 e~~~~~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill----~~~~~~kl~Dfg~~~~~~~  171 (355)
T cd07874         102 ELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTAGT  171 (355)
T ss_pred             hhhcccHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE----CCCCCEEEeeCcccccCCC
Confidence            3445666666654   38899999999999999999999999999999999999    6678899999999976543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.56  E-value=2.3e-14  Score=88.63  Aligned_cols=96  Identities=13%  Similarity=0.084  Sum_probs=77.6

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCC-CCCceEEEeecCceeeeccC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGK-DAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~-~~~~~~~i~dfg~a~~~~~~   79 (97)
                      |+..|.+|.++..=+...|+.+.+.-++.|++..+.++|++.+|.||+||+|+++.... .....+-++|||+|+.+...
T Consensus       103 idLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp  182 (449)
T KOG1165|consen  103 IDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP  182 (449)
T ss_pred             hhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence            46679999999998877799999999999999999999999999999999999996532 34567899999999876533


Q ss_pred             Ccc-----eeeccccCcccccc
Q 038072           80 GLL-----NVTGVGEGQVADIS   96 (97)
Q Consensus        80 ~~~-----~~~~~~~~~~~~~~   96 (97)
                      .-.     .+--..+|+..|||
T Consensus       183 ~TkqHIPYrE~KSLsGTARYMS  204 (449)
T KOG1165|consen  183 KTKQHIPYREHKSLSGTARYMS  204 (449)
T ss_pred             cccccCccccccccccceeeeE
Confidence            222     22235677888887

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.56  E-value=1.5e-14  Score=91.56  Aligned_cols=68  Identities=24%  Similarity=0.276  Sum_probs=61.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      +.||+|.+++... ..+++..+..++.|++.++.|+|+.+++|+|+|++||++    +....++|+|||++..
T Consensus        83 ~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili----~~~~~~kL~DFGl~~~  150 (381)
T cd05626          83 IPGGDMMSLLIRM-EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILI----DLDGHIKLTDFGLCTG  150 (381)
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEE----CCCCCEEEeeCcCCcc
Confidence            3589999999876 458999999999999999999999999999999999999    6678899999999764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.56  E-value=3.1e-14  Score=87.41  Aligned_cols=71  Identities=17%  Similarity=0.169  Sum_probs=60.7

Q ss_pred             CCCCHHHHHhhcc---------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEe
Q 038072            4 SGVNFYNHSKKSA---------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV   68 (97)
Q Consensus         4 ~g~~l~~~l~~~~---------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~   68 (97)
                      .+++|.+++....               ..+++..+..++.|++.|+.|+|+.+++|+|++++||++    ..+..++++
T Consensus       104 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili----~~~~~~kl~  179 (304)
T cd05101         104 SKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLV----TENNVMKIA  179 (304)
T ss_pred             CCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEE----cCCCcEEEC
Confidence            4679999887531               236788889999999999999999999999999999999    667889999


Q ss_pred             ecCceeeecc
Q 038072           69 ARGDKCLHER   78 (97)
Q Consensus        69 dfg~a~~~~~   78 (97)
                      |||+++....
T Consensus       180 D~g~~~~~~~  189 (304)
T cd05101         180 DFGLARDVNN  189 (304)
T ss_pred             CCccceeccc
Confidence            9999986643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.56  E-value=1.6e-14  Score=90.84  Aligned_cols=70  Identities=20%  Similarity=0.228  Sum_probs=63.9

Q ss_pred             CCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            3 SSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      |.||||+.+++++. ++|++..++.++.+++.||.|+|-.||+.||+||+||++    .++..+-+.||-++...
T Consensus       159 CpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILv----redGHIMLsDFDLS~~~  229 (459)
T KOG0610|consen  159 CPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILV----REDGHIMLSDFDLSLRC  229 (459)
T ss_pred             CCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEE----ecCCcEEeeeccccccC
Confidence            77999999998764 559999999999999999999999999999999999999    88899999999887654

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.56  E-value=1.6e-14  Score=90.67  Aligned_cols=69  Identities=22%  Similarity=0.254  Sum_probs=58.9

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +..++++.+.+..   .+++..+..++.|++.|+.|+|+++++|+|++++||++    ..+..++|+|||+++...
T Consensus       106 e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~----~~~~~~kl~Dfg~a~~~~  174 (359)
T cd07876         106 ELMDANLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTAC  174 (359)
T ss_pred             eCCCcCHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE----CCCCCEEEecCCCccccc
Confidence            4455667766643   38899999999999999999999999999999999999    777889999999997543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.56  E-value=2.4e-14  Score=90.30  Aligned_cols=72  Identities=26%  Similarity=0.346  Sum_probs=62.7

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +..+++|.+++... ..+++..+..++.|++.|+.|+|+.+++|+|++++||++    +.+..++|+|||+++....
T Consensus        84 e~~~~~l~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili----~~~~~~kL~Dfg~a~~~~~  155 (372)
T cd07853          84 ELMQSDLHKIIVSP-QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV----NSNCVLKICDFGLARVEEP  155 (372)
T ss_pred             eccccCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEE----CCCCCEEeccccceeeccc
Confidence            44567888887665 459999999999999999999999999999999999999    7788999999999986543

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.56  E-value=4.3e-15  Score=85.51  Aligned_cols=70  Identities=24%  Similarity=0.249  Sum_probs=62.9

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +..+|..+.....+.++.+.++.++.|++.++.+||+++++|||+||.|+++    ..+..+|++|||+++-+.
T Consensus        83 cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnlli----n~ngelkladfglarafg  152 (292)
T KOG0662|consen   83 CDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLI----NRNGELKLADFGLARAFG  152 (292)
T ss_pred             hhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEe----ccCCcEEecccchhhhcC
Confidence            3457777888777779999999999999999999999999999999999999    778999999999998654

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.56  E-value=3.3e-14  Score=89.88  Aligned_cols=57  Identities=21%  Similarity=0.297  Sum_probs=51.0

Q ss_pred             ccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           18 ILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        18 ~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++..+..++.|++.++.|+|+.+++|+|+|++||++    ..+..++++|||++.....
T Consensus       210 ~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill----~~~~~~kl~DfG~a~~~~~  266 (375)
T cd05104         210 ALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILL----THGRITKICDFGLARDIRN  266 (375)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEE----ECCCcEEEecCccceeccC
Confidence            36788889999999999999999999999999999999    5677899999999986543

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.56  E-value=3.7e-14  Score=85.37  Aligned_cols=70  Identities=17%  Similarity=0.152  Sum_probs=62.8

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+++|.+++......+++..+..++.+++.++.++|+++++|+|++++||++    ..+..++++|||++....
T Consensus        77 ~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~----~~~~~~kl~dfg~~~~~~  146 (257)
T cd05115          77 SGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLL----VNQHYAKISDFGLSKALG  146 (257)
T ss_pred             CCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEE----cCCCcEEeccCCcccccc
Confidence            5789999987655669999999999999999999999999999999999999    667889999999987544

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.56  E-value=2e-14  Score=96.59  Aligned_cols=71  Identities=21%  Similarity=0.241  Sum_probs=63.1

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++... +.+++..++.++.|++.|+.|+|.++++|+|+|++||++    .....++|+|||+++....
T Consensus        86 ~~g~~L~~li~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl----~~~g~vkL~DFGls~~~~~  156 (669)
T cd05610          86 LIGGDVKSLLHIY-GYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLI----SNEGHIKLTDFGLSKVTLN  156 (669)
T ss_pred             CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEE----cCCCCEEEEeCCCCccccC
Confidence            3489999999775 458999999999999999999999999999999999999    6677899999999986554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.56  E-value=3.2e-14  Score=88.83  Aligned_cols=57  Identities=23%  Similarity=0.269  Sum_probs=51.6

Q ss_pred             ccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           18 ILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        18 ~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++..+..++.|++.++.|+|+.+++|+|+|++||++    ..+..++++|||++.....
T Consensus       169 ~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill----~~~~~vkL~DfG~a~~~~~  225 (337)
T cd05054         169 PLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILL----SENNVVKICDFGLARDIYK  225 (337)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE----eCCCcEEEeccccchhccc
Confidence            47889999999999999999999999999999999999    5677899999999986543

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.55  E-value=2.5e-14  Score=89.96  Aligned_cols=71  Identities=23%  Similarity=0.281  Sum_probs=60.6

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+..+++|.+.+..   .+++..+..++.|++.|+.|+|+++++|+|++++||++    ..+..++|+|||+++....
T Consensus       108 ~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~~kL~DfG~a~~~~~  178 (364)
T cd07875         108 MELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTAGT  178 (364)
T ss_pred             EeCCCCCHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEE----CCCCcEEEEeCCCccccCC
Confidence            34556677777754   28889999999999999999999999999999999999    6778899999999976543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.55  E-value=3.8e-14  Score=87.46  Aligned_cols=71  Identities=15%  Similarity=0.161  Sum_probs=61.1

Q ss_pred             CCCCHHHHHhhcc---------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEe
Q 038072            4 SGVNFYNHSKKSA---------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV   68 (97)
Q Consensus         4 ~g~~l~~~l~~~~---------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~   68 (97)
                      .+++|.+++....               ..+++..+..++.|++.++.|+|+++++|+|++++|+++    ..+..++++
T Consensus       101 ~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill----~~~~~~kL~  176 (314)
T cd05099         101 AKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV----TEDNVMKIA  176 (314)
T ss_pred             CCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEE----cCCCcEEEc
Confidence            4789999986532               237888999999999999999999999999999999999    667789999


Q ss_pred             ecCceeeecc
Q 038072           69 ARGDKCLHER   78 (97)
Q Consensus        69 dfg~a~~~~~   78 (97)
                      |||+++....
T Consensus       177 Dfg~~~~~~~  186 (314)
T cd05099         177 DFGLARGVHD  186 (314)
T ss_pred             cccccccccc
Confidence            9999976543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.55  E-value=1.2e-14  Score=97.23  Aligned_cols=76  Identities=21%  Similarity=0.242  Sum_probs=64.8

Q ss_pred             CCCC-CCCHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHcC--ccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            1 MASS-GVNFYNHSKKS-AKILLEHEVRRYTRDILRGLDHIHSHG--VAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         1 m~~~-g~~l~~~l~~~-~~~l~~~~~~~~~~~i~~~l~~~h~~~--~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      ||.+ ||.|.+++.++ ..+|++.++..++.+++.|+.+||...  ++|||||.+|+|+    ..+...|+||||.|...
T Consensus       121 mEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLl----s~~g~~KLCDFGSatt~  196 (738)
T KOG1989|consen  121 MEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLL----SADGNYKLCDFGSATTK  196 (738)
T ss_pred             hhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEE----cCCCCEEeCcccccccc
Confidence            4444 58999999864 355999999999999999999999876  9999999999999    77889999999999765


Q ss_pred             ccCC
Q 038072           77 ERHG   80 (97)
Q Consensus        77 ~~~~   80 (97)
                      ....
T Consensus       197 ~~~~  200 (738)
T KOG1989|consen  197 ILSP  200 (738)
T ss_pred             cCCC
Confidence            5433

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.55  E-value=3.9e-14  Score=84.66  Aligned_cols=72  Identities=18%  Similarity=0.233  Sum_probs=64.6

Q ss_pred             CCCCHHHHHhhc--------ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            4 SGVNFYNHSKKS--------AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         4 ~g~~l~~~l~~~--------~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      .|++|.+++...        ...+++..+..++.|++.++.++|+++++|+|++++||++    ..+..++++|||.+..
T Consensus        79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili----~~~~~~~l~dfg~~~~  154 (262)
T cd00192          79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLV----GEDLVVKISDFGLSRD  154 (262)
T ss_pred             cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEE----CCCCcEEEcccccccc
Confidence            489999999875        3558999999999999999999999999999999999999    7778999999999987


Q ss_pred             eccC
Q 038072           76 HERH   79 (97)
Q Consensus        76 ~~~~   79 (97)
                      ....
T Consensus       155 ~~~~  158 (262)
T cd00192         155 VYDD  158 (262)
T ss_pred             cccc
Confidence            6543

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>PTZ00284 protein kinase; Provisional

Probab=99.55  E-value=2.2e-14  Score=92.91  Aligned_cols=74  Identities=19%  Similarity=0.223  Sum_probs=60.2

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCcEEEeeCCC------------CCceEEE
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILLVPGKD------------AGFMAKI   67 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~-~~~~~~~l~~~~i~~~~~~~------------~~~~~~i   67 (97)
                      |+..|++|.+++.+. +.+++..+..++.|++.|+.|+|+ .+++|+|+|++||++.....            ....+||
T Consensus       211 ~~~~g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl  289 (467)
T PTZ00284        211 MPKYGPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRI  289 (467)
T ss_pred             EeccCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEE
Confidence            455688999988775 559999999999999999999998 59999999999999943210            1125899


Q ss_pred             eecCceee
Q 038072           68 VARGDKCL   75 (97)
Q Consensus        68 ~dfg~a~~   75 (97)
                      +|||.+..
T Consensus       290 ~DfG~~~~  297 (467)
T PTZ00284        290 CDLGGCCD  297 (467)
T ss_pred             CCCCcccc
Confidence            99998754

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.55  E-value=4.3e-14  Score=85.34  Aligned_cols=71  Identities=14%  Similarity=0.150  Sum_probs=60.2

Q ss_pred             CCCCHHHHHhhc-----ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKS-----AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~-----~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.+++...     ...+++..+..++.|++.|+.|+|+++++|+|++++||++    ..+..++|+|||+++....
T Consensus        89 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~  164 (272)
T cd05075          89 KHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCML----NENMNVCVADFGLSKKIYN  164 (272)
T ss_pred             CCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEE----cCCCCEEECCCCcccccCc
Confidence            467888876431     1337899999999999999999999999999999999999    6678899999999987544

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.55  E-value=3.2e-14  Score=87.64  Aligned_cols=77  Identities=22%  Similarity=0.203  Sum_probs=61.5

Q ss_pred             CCCCCCHHHHHhhc--------ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCce
Q 038072            2 ASSGVNFYNHSKKS--------AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDK   73 (97)
Q Consensus         2 ~~~g~~l~~~l~~~--------~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a   73 (97)
                      +..+++|.+++...        ...+++..+..++.|++.|+.|+|+.+++|+|+|++||++.........++|+|||++
T Consensus        80 e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07867          80 DYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             eeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence            45567888776531        1237899999999999999999999999999999999998543234567999999999


Q ss_pred             eeecc
Q 038072           74 CLHER   78 (97)
Q Consensus        74 ~~~~~   78 (97)
                      +....
T Consensus       160 ~~~~~  164 (317)
T cd07867         160 RLFNS  164 (317)
T ss_pred             eccCC
Confidence            86543

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.54  E-value=2.4e-14  Score=97.60  Aligned_cols=75  Identities=13%  Similarity=0.151  Sum_probs=62.0

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeC---------------CCCCceE
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPG---------------KDAGFMA   65 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~---------------~~~~~~~   65 (97)
                      |++.+++|.+++......+++.++..++.|++.|+.|+|+++|+|||+||+||++...               ......+
T Consensus        59 ~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~  138 (793)
T PLN00181         59 LECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATT  138 (793)
T ss_pred             hccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcc
Confidence            5677899999998654569999999999999999999999999999999999999421               0223457


Q ss_pred             EEeecCceee
Q 038072           66 KIVARGDKCL   75 (97)
Q Consensus        66 ~i~dfg~a~~   75 (97)
                      |+.|||+++.
T Consensus       139 ki~DfG~a~~  148 (793)
T PLN00181        139 KSREIGSSRR  148 (793)
T ss_pred             cccccccccc
Confidence            7888888764

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.54  E-value=1e-14  Score=88.35  Aligned_cols=75  Identities=24%  Similarity=0.180  Sum_probs=63.9

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~-~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      |++.+..+..+++..+++++|..+-.+...++.|+.|+.. ++|+|||+||+||++    +....+|++|||.+.+...+
T Consensus       170 MelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILl----De~GniKlCDFGIsGrlvdS  245 (391)
T KOG0983|consen  170 MELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL----DERGNIKLCDFGISGRLVDS  245 (391)
T ss_pred             HHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEE----ccCCCEEeecccccceeecc
Confidence            4455556667777777889999999999999999999984 799999999999999    88999999999998776543

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.54  E-value=4e-14  Score=86.14  Aligned_cols=72  Identities=17%  Similarity=0.225  Sum_probs=60.0

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +...+.+.+.+......+++..+..++.|++.|+.|+|+.+++|+|++++||++    ..+..++|+|||++....
T Consensus        80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill----~~~~~~kl~Dfg~~~~~~  151 (287)
T cd07848          80 EYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLI----SHNDVLKLCDFGFARNLS  151 (287)
T ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----cCCCcEEEeeccCccccc
Confidence            444445555555444558999999999999999999999999999999999999    677889999999998654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.54  E-value=4.2e-14  Score=87.01  Aligned_cols=71  Identities=17%  Similarity=0.158  Sum_probs=61.0

Q ss_pred             CCCCCHHHHHhhcc---------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEE
Q 038072            3 SSGVNFYNHSKKSA---------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKI   67 (97)
Q Consensus         3 ~~g~~l~~~l~~~~---------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i   67 (97)
                      +.+++|.+++....               ..+++..+..++.|++.++.|+|+++++|+|++++||++    ..+..+++
T Consensus       106 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill----~~~~~~kL  181 (307)
T cd05098         106 ASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV----TEDNVMKI  181 (307)
T ss_pred             CCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEE----cCCCcEEE
Confidence            34689999987632               237889999999999999999999999999999999999    66778999


Q ss_pred             eecCceeeec
Q 038072           68 VARGDKCLHE   77 (97)
Q Consensus        68 ~dfg~a~~~~   77 (97)
                      +|||.+....
T Consensus       182 ~dfg~a~~~~  191 (307)
T cd05098         182 ADFGLARDIH  191 (307)
T ss_pred             CCCccccccc
Confidence            9999987554

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.54  E-value=6.7e-14  Score=88.90  Aligned_cols=74  Identities=26%  Similarity=0.306  Sum_probs=63.8

Q ss_pred             CCCHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            5 GVNFYNHSKKS-AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         5 g~~l~~~l~~~-~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +|++.++++.. ...+.|..+..++++++.|+.|+|.+|.+|||+|+.||++    +.+..+||+|||..-....++..
T Consensus       108 ~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi----~~dG~VkLadFgvsa~l~~~G~R  182 (516)
T KOG0582|consen  108 GGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILI----DSDGTVKLADFGVSASLFDSGDR  182 (516)
T ss_pred             CCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEE----cCCCcEEEcCceeeeeecccCce
Confidence            69999999864 3449999999999999999999999999999999999999    88999999999976554444433

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.54  E-value=6.8e-14  Score=83.71  Aligned_cols=71  Identities=18%  Similarity=0.208  Sum_probs=62.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      ..+++|.+++......+++..+..++.|++.++.|+|+++++|+|++++||++    ..+..++++|||.+....
T Consensus        75 ~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~----~~~~~~kl~dfg~~~~~~  145 (252)
T cd05084          75 VQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLV----TEKNVLKISDFGMSREEE  145 (252)
T ss_pred             ccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEE----cCCCcEEECccccCcccc
Confidence            35789999987654558999999999999999999999999999999999999    667789999999987543

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.54  E-value=6.3e-14  Score=85.51  Aligned_cols=72  Identities=15%  Similarity=0.255  Sum_probs=61.8

Q ss_pred             CCCCCHHHHHhhc---------------ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEE
Q 038072            3 SSGVNFYNHSKKS---------------AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKI   67 (97)
Q Consensus         3 ~~g~~l~~~l~~~---------------~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i   67 (97)
                      +.+++|.+++...               ...+++..+..++.|++.++.|+|+.+++|+|++++||++    ..+..+++
T Consensus        98 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~----~~~~~~kL  173 (293)
T cd05053          98 AAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV----TEDHVMKI  173 (293)
T ss_pred             CCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE----cCCCeEEe
Confidence            3578999988642               2348899999999999999999999999999999999999    66788999


Q ss_pred             eecCceeeecc
Q 038072           68 VARGDKCLHER   78 (97)
Q Consensus        68 ~dfg~a~~~~~   78 (97)
                      +|||+++....
T Consensus       174 ~Dfg~~~~~~~  184 (293)
T cd05053         174 ADFGLARDIHH  184 (293)
T ss_pred             Ccccccccccc
Confidence            99999976543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.54  E-value=8.9e-15  Score=96.01  Aligned_cols=84  Identities=27%  Similarity=0.243  Sum_probs=73.6

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      |+++-|+-.+++.-.++++.+.++..+..+.+.|+.|+|+++.||||+|..||++    .+...+|++|||.|.+..+..
T Consensus       105 MEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILL----se~g~VKLaDFGSAsi~~PAn  180 (948)
T KOG0577|consen  105 MEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILL----SEPGLVKLADFGSASIMAPAN  180 (948)
T ss_pred             HHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEe----cCCCeeeeccccchhhcCchh
Confidence            5667788889998877889999999999999999999999999999999999999    788999999999998877654


Q ss_pred             cceeeccccCcc
Q 038072           81 LLNVTGVGEGQV   92 (97)
Q Consensus        81 ~~~~~~~~~~~~   92 (97)
                          +++|||..
T Consensus       181 ----sFvGTPyw  188 (948)
T KOG0577|consen  181 ----SFVGTPYW  188 (948)
T ss_pred             ----cccCCccc
Confidence                55666543

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.53  E-value=9.4e-14  Score=84.33  Aligned_cols=71  Identities=17%  Similarity=0.153  Sum_probs=61.0

Q ss_pred             CCCCHHHHHhhcc---------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEe
Q 038072            4 SGVNFYNHSKKSA---------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV   68 (97)
Q Consensus         4 ~g~~l~~~l~~~~---------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~   68 (97)
                      .+++|.+++....               ..+++..+..++.|++.++.|+|+.+++|+|++++||++    ..+..++|+
T Consensus        91 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~----~~~~~~~L~  166 (283)
T cd05048          91 AHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLV----GEGLTVKIS  166 (283)
T ss_pred             CCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEE----cCCCcEEEC
Confidence            4789999887531               337888999999999999999999999999999999999    667889999


Q ss_pred             ecCceeeecc
Q 038072           69 ARGDKCLHER   78 (97)
Q Consensus        69 dfg~a~~~~~   78 (97)
                      |||++.....
T Consensus       167 dfg~~~~~~~  176 (283)
T cd05048         167 DFGLSRDIYS  176 (283)
T ss_pred             CCcceeeccc
Confidence            9999976543

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.53  E-value=7.9e-14  Score=84.89  Aligned_cols=70  Identities=30%  Similarity=0.427  Sum_probs=62.4

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++... +.+++..+..++.|++.++.|+|+.+++|+|++++||++    ..+..++++|||++....
T Consensus        79 ~~~~~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~----~~~~~~~l~dfg~~~~~~  148 (279)
T cd05633          79 MNGGDLHYHLSQH-GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILL----DEHGHVRISDLGLACDFS  148 (279)
T ss_pred             CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEE----CCCCCEEEccCCcceecc
Confidence            3578999988776 459999999999999999999999999999999999999    777889999999987543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.53  E-value=5.5e-14  Score=83.93  Aligned_cols=77  Identities=17%  Similarity=0.132  Sum_probs=67.6

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |...|.+|.++..-...+++.+.+.-++-|++..+.|+|.++.+|||+||+|+++.-+ ....++.+.|||+++++-.
T Consensus        90 MdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlg-rh~~kl~LIDFGLaKky~d  166 (341)
T KOG1163|consen   90 MDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLG-RHCNKLYLIDFGLAKKYRD  166 (341)
T ss_pred             eeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccc-cccceEEEEeccchhhhcc
Confidence            6778999999999877779999999999999999999999999999999999998433 3456789999999987653

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.53  E-value=9.2e-14  Score=83.48  Aligned_cols=70  Identities=17%  Similarity=0.169  Sum_probs=62.2

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.+++... ..+++..+..++.|++.++.++|+++++|+|+++.|+++    ..+..++++|||++.....
T Consensus        78 ~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill----~~~~~~kl~Dfg~~~~~~~  147 (257)
T cd05116          78 ELGPLNKFLQKN-KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLL----VTQHYAKISDFGLSKALGA  147 (257)
T ss_pred             CCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEE----cCCCeEEECCCccccccCC
Confidence            468999998765 458999999999999999999999999999999999999    6677899999999876544

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.53  E-value=5.1e-14  Score=85.54  Aligned_cols=72  Identities=19%  Similarity=0.214  Sum_probs=63.2

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +..+++|.+++....+.+++..+..++.|++.|+.|+|+++++|+|++++|+++    ..+..++|.|||++....
T Consensus        79 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~----~~~~~~~l~dfg~~~~~~  150 (284)
T cd07839          79 EYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLI----NKNGELKLADFGLARAFG  150 (284)
T ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE----cCCCcEEECccchhhccC
Confidence            455678888887655669999999999999999999999999999999999999    667889999999987543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.53  E-value=7.5e-14  Score=84.82  Aligned_cols=70  Identities=19%  Similarity=0.139  Sum_probs=58.3

Q ss_pred             CCCCHHHHHhhc---------------ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEe
Q 038072            4 SGVNFYNHSKKS---------------AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV   68 (97)
Q Consensus         4 ~g~~l~~~l~~~---------------~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~   68 (97)
                      .+++|.+++...               +..+++..+..++.|++.|+.|+|+++++|+|+|++|+++    ..+..++++
T Consensus        91 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~----~~~~~~kl~  166 (283)
T cd05091          91 SHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLV----FDKLNVKIS  166 (283)
T ss_pred             CCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEe----cCCCceEec
Confidence            457777776421               1337888899999999999999999999999999999999    667789999


Q ss_pred             ecCceeeec
Q 038072           69 ARGDKCLHE   77 (97)
Q Consensus        69 dfg~a~~~~   77 (97)
                      |||+++...
T Consensus       167 Dfg~~~~~~  175 (283)
T cd05091         167 DLGLFREVY  175 (283)
T ss_pred             ccccccccc
Confidence            999987654

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.53  E-value=1.7e-14  Score=85.46  Aligned_cols=81  Identities=22%  Similarity=0.180  Sum_probs=66.3

Q ss_pred             CCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            4 SGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         4 ~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      ..|.++..|.... +++++..+..+..|++.|+.|||..+|+|||+||+|+++    .....+|++|||.+..-.  ...
T Consensus       105 ~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLl----g~~~~lkiAdfGwsV~~p--~~k  178 (281)
T KOG0580|consen  105 PRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLL----GSAGELKIADFGWSVHAP--SNK  178 (281)
T ss_pred             CCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhcc----CCCCCeeccCCCceeecC--CCC
Confidence            3578888888432 449999999999999999999999999999999999999    888999999999987654  223


Q ss_pred             eeeccccC
Q 038072           83 NVTGVGEG   90 (97)
Q Consensus        83 ~~~~~~~~   90 (97)
                      ..|-|||-
T Consensus       179 R~tlcgt~  186 (281)
T KOG0580|consen  179 RKTLCGTL  186 (281)
T ss_pred             ceeeeccc
Confidence            34555543

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.52  E-value=4.4e-14  Score=92.35  Aligned_cols=75  Identities=28%  Similarity=0.474  Sum_probs=64.9

Q ss_pred             CCCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |..+.+|+++++.++ ..|+...++.+..|++.+|.+||..+|||-||||+||++..  .....+||.|||.++....
T Consensus       268 ELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~--~~r~~vKVIDFGSSc~~~q  343 (586)
T KOG0667|consen  268 ELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKD--PKRSRIKVIDFGSSCFESQ  343 (586)
T ss_pred             hhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeecc--CCcCceeEEecccccccCC
Confidence            456789999999864 33899999999999999999999999999999999999965  3456899999999986544

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.52  E-value=1.2e-13  Score=83.30  Aligned_cols=72  Identities=13%  Similarity=0.098  Sum_probs=61.4

Q ss_pred             CCCCHHHHHhhc-----ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKS-----AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~-----~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.+++...     ...+++..+..++.|++.|+.|+|+.+++|+|++++||++    ..+..++++|||+++....
T Consensus        90 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~----~~~~~~kl~dfg~~~~~~~  165 (273)
T cd05035          90 KHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCML----REDMTVCVADFGLSKKIYS  165 (273)
T ss_pred             CCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEE----CCCCeEEECCccceeeccc
Confidence            568888887432     1248999999999999999999999999999999999999    6778899999999987654


Q ss_pred             C
Q 038072           79 H   79 (97)
Q Consensus        79 ~   79 (97)
                      .
T Consensus       166 ~  166 (273)
T cd05035         166 G  166 (273)
T ss_pred             c
Confidence            3

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.52  E-value=1.3e-13  Score=84.24  Aligned_cols=71  Identities=17%  Similarity=0.134  Sum_probs=62.0

Q ss_pred             CCCCCHHHHHhhcc----------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCc
Q 038072            3 SSGVNFYNHSKKSA----------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGD   72 (97)
Q Consensus         3 ~~g~~l~~~l~~~~----------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~   72 (97)
                      ..+++|.+++....          ..+++..+..++.|++.++.|+|+.+++|+|++++|+++    .....++++|||+
T Consensus       101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili----~~~~~~~l~dfg~  176 (296)
T cd05051         101 MENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLV----GKNYTIKIADFGM  176 (296)
T ss_pred             CCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceee----cCCCceEEccccc
Confidence            35789999987653          148999999999999999999999999999999999999    6678999999999


Q ss_pred             eeeec
Q 038072           73 KCLHE   77 (97)
Q Consensus        73 a~~~~   77 (97)
                      +....
T Consensus       177 ~~~~~  181 (296)
T cd05051         177 SRNLY  181 (296)
T ss_pred             eeecc
Confidence            87643

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.52  E-value=1.1e-13  Score=83.16  Aligned_cols=70  Identities=14%  Similarity=0.117  Sum_probs=62.8

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++...+..+++..+..++.|++.++.++|+.+++|+|++++||++    ..+..++++|||+++...
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i----~~~~~~kl~dfg~~~~~~  151 (256)
T cd05059          82 ANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLV----GEDNVVKVSDFGLARYVL  151 (256)
T ss_pred             CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEE----CCCCcEEECCcccceecc
Confidence            4789999998765568999999999999999999999999999999999999    667889999999987654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.52  E-value=1.1e-13  Score=84.31  Aligned_cols=71  Identities=17%  Similarity=0.194  Sum_probs=62.9

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++.+....+++..+..++.+++.++.|+|+++++|+|++++||++    ..+..++++|||+++....
T Consensus        91 ~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~----~~~~~~~l~dfg~~~~~~~  161 (284)
T cd05079          91 PSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV----ESEHQVKIGDFGLTKAIET  161 (284)
T ss_pred             CCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEE----cCCCCEEECCCcccccccc
Confidence            4899999997754558999999999999999999999999999999999999    6677899999999876543

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.52  E-value=5.8e-14  Score=86.62  Aligned_cols=69  Identities=30%  Similarity=0.373  Sum_probs=60.7

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCcee
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKC   74 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~   74 (97)
                      .||+|.+.+.+. ..|.+.++..+...++.|+.|+|.++|.|||+||+||+.... +.-..+||+||.++.
T Consensus       159 ~GGplLshI~~~-~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~p-n~vsPvKiCDfDLgS  227 (463)
T KOG0607|consen  159 RGGPLLSHIQKR-KHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESP-NKVSPVKICDFDLGS  227 (463)
T ss_pred             cCchHHHHHHHh-hhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCC-CCcCceeeecccccc
Confidence            489999998887 559999999999999999999999999999999999998654 445678999997764

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.52  E-value=7.9e-14  Score=89.01  Aligned_cols=86  Identities=20%  Similarity=0.190  Sum_probs=76.1

Q ss_pred             CCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---------CccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            5 GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSH---------GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         5 g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~---------~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      -|+|.++|+.+  ..+|.+...++..++.|+.|+|+.         .|+|||+|..|+++    ..+...-|+|||+|.+
T Consensus       292 kGsL~dyL~~n--tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLv----K~DlTccIaDFGLAl~  365 (534)
T KOG3653|consen  292 KGSLCDYLKAN--TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLV----KNDLTCCIADFGLALR  365 (534)
T ss_pred             CCcHHHHHHhc--cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEE----ccCCcEEeeccceeEE
Confidence            48999999984  589999999999999999999962         59999999999999    7889999999999999


Q ss_pred             eccCCcceeeccccCcccccc
Q 038072           76 HERHGLLNVTGVGEGQVADIS   96 (97)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~   96 (97)
                      +.+......+..-.|+..||+
T Consensus       366 ~~p~~~~~d~~~qVGT~RYMA  386 (534)
T KOG3653|consen  366 LEPGKPQGDTHGQVGTRRYMA  386 (534)
T ss_pred             ecCCCCCcchhhhhhhhhhcC
Confidence            998777776666778888886

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.52  E-value=7.8e-14  Score=91.17  Aligned_cols=72  Identities=22%  Similarity=0.304  Sum_probs=57.9

Q ss_pred             CCCCCHHHHHhhcc----cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSA----KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~----~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ..++++.+++....    .......+..++.|++.|+.|+|+++++|+|+|++||++    ..+..++|+|||+++....
T Consensus       244 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl----~~~~~vkL~DFGla~~~~~  319 (501)
T PHA03210        244 KYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFL----NCDGKIVLGDFGTAMPFEK  319 (501)
T ss_pred             ccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----CCCCCEEEEeCCCceecCc
Confidence            34567777765421    123456778899999999999999999999999999999    6778899999999987654

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.52  E-value=1.3e-13  Score=82.58  Aligned_cols=76  Identities=11%  Similarity=-0.037  Sum_probs=62.0

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCC---CCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGK---DAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~---~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.+++|.+++......+++..+..++.|++.++.|+|+++++|+|++++||++....   .....++++|||++.....
T Consensus        82 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~  160 (259)
T cd05037          82 VKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS  160 (259)
T ss_pred             CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccccc
Confidence            357899999987644689999999999999999999999999999999999994321   0112699999999886443

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.51  E-value=1.6e-13  Score=83.40  Aligned_cols=72  Identities=22%  Similarity=0.251  Sum_probs=61.6

Q ss_pred             CCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++.... ..+++..+..++.|++.++.|+|+.+++|+|++++||++    ..+..++|+|||++.....
T Consensus        75 ~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili----~~~~~~~l~Dfg~~~~~~~  147 (277)
T cd05607          75 MNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLL----DDQGNCRLSDLGLAVELKD  147 (277)
T ss_pred             CCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEE----cCCCCEEEeeceeeeecCC
Confidence            35789988876532 348899999999999999999999999999999999999    6778899999999876543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.51  E-value=1.5e-13  Score=85.55  Aligned_cols=71  Identities=17%  Similarity=0.162  Sum_probs=60.4

Q ss_pred             CCCCHHHHHhhcc---------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEe
Q 038072            4 SGVNFYNHSKKSA---------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV   68 (97)
Q Consensus         4 ~g~~l~~~l~~~~---------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~   68 (97)
                      .+++|.+++.+..               ..+++..+..++.|++.|+.|+|+.+++|+|++++||++    ..+..++|+
T Consensus       101 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill----~~~~~~kL~  176 (334)
T cd05100         101 SKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLV----TEDNVMKIA  176 (334)
T ss_pred             CCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE----cCCCcEEEC
Confidence            4689999887531               236778888999999999999999999999999999999    667789999


Q ss_pred             ecCceeeecc
Q 038072           69 ARGDKCLHER   78 (97)
Q Consensus        69 dfg~a~~~~~   78 (97)
                      |||+++....
T Consensus       177 Dfg~~~~~~~  186 (334)
T cd05100         177 DFGLARDVHN  186 (334)
T ss_pred             Ccccceeccc
Confidence            9999976543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.51  E-value=1.2e-13  Score=83.57  Aligned_cols=69  Identities=17%  Similarity=0.205  Sum_probs=58.8

Q ss_pred             CCCCCHHHHHhhcc---cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            3 SSGVNFYNHSKKSA---KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         3 ~~g~~l~~~l~~~~---~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      +.+++|.+++.+..   ..+++..+..++.|++.|+.|+|+.+++|+|++++||++    ..+..++++|||++..
T Consensus        77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~----~~~~~~~l~Dfg~~~~  148 (268)
T cd05086          77 CELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFL----TSDLTVKVGDYGIGPS  148 (268)
T ss_pred             CCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEE----cCCccEEecccccccc
Confidence            35789999987642   235677888999999999999999999999999999999    6677899999998754

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.51  E-value=1.5e-13  Score=83.52  Aligned_cols=71  Identities=18%  Similarity=0.183  Sum_probs=63.2

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.+++......+++..+..++.|++.++.|+|+++++|+|++++||++    ..+..+++.|||++.....
T Consensus        90 ~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili----~~~~~~~l~dfg~~~~~~~  160 (284)
T cd05081          90 PYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILV----ESENRVKIGDFGLTKVLPQ  160 (284)
T ss_pred             CCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEE----CCCCeEEECCCcccccccC
Confidence            4789999997654558999999999999999999999999999999999999    6778899999999986543

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.51  E-value=7.6e-14  Score=85.62  Aligned_cols=73  Identities=19%  Similarity=0.233  Sum_probs=63.4

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      |+...++|.+++......+++..+..++.|++.++.++|+.+++|+|++++||++    ..+..++++|||++....
T Consensus        83 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~----~~~~~~kl~dfg~~~~~~  155 (301)
T cd07873          83 FEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLI----NERGELKLADFGLARAKS  155 (301)
T ss_pred             EeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEE----CCCCcEEECcCcchhccC
Confidence            3455678999887765668999999999999999999999999999999999999    677889999999987543

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.51  E-value=1.2e-13  Score=84.45  Aligned_cols=73  Identities=21%  Similarity=0.271  Sum_probs=64.4

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +..+++|.+++......+++..+..++.|++.++.|+|+++++|+|++++||++    ..+..++|.|||++.....
T Consensus        82 e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill----~~~~~~~l~dfg~~~~~~~  154 (298)
T cd07841          82 EFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLI----ASDGVLKLADFGLARSFGS  154 (298)
T ss_pred             cccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEE----cCCCCEEEccceeeeeccC
Confidence            445789999998764359999999999999999999999999999999999999    6678899999999987654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.51  E-value=1.1e-13  Score=83.56  Aligned_cols=69  Identities=14%  Similarity=0.208  Sum_probs=61.5

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      .+++|.+++......+++..+..++.|++.|+.|+|+++++|+|++++||++    ..+..++++|||.+...
T Consensus        89 ~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili----~~~~~~~l~dfg~~~~~  157 (266)
T cd05064          89 SNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLV----NSDLVCKISGFRRLQED  157 (266)
T ss_pred             CCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEE----cCCCcEEECCCcccccc
Confidence            4789999988765568999999999999999999999999999999999999    66788999999987653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.51  E-value=1.7e-13  Score=85.62  Aligned_cols=55  Identities=22%  Similarity=0.254  Sum_probs=49.8

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072           19 LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        19 l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +++..+..++.|++.|+.|+|+++++|+|+++.||++    ..+..++++|||++....
T Consensus       176 ~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~----~~~~~~kl~dfg~~~~~~  230 (343)
T cd05103         176 LTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILL----SENNVVKICDFGLARDIY  230 (343)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEE----cCCCcEEEEecccccccc
Confidence            6777888899999999999999999999999999999    667889999999987653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.51  E-value=1.1e-13  Score=84.16  Aligned_cols=70  Identities=30%  Similarity=0.418  Sum_probs=62.0

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++... +.+++..+..++.|++.++.|+|+.+++|+|++++||++    ..+..++++|||++....
T Consensus        79 ~~g~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili----~~~~~~kl~dfg~~~~~~  148 (278)
T cd05606          79 MNGGDLHYHLSQH-GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILL----DEHGHVRISDLGLACDFS  148 (278)
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEE----CCCCCEEEccCcCccccC
Confidence            3578999888765 559999999999999999999999999999999999999    667789999999987543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.51  E-value=1.7e-13  Score=83.61  Aligned_cols=70  Identities=14%  Similarity=0.131  Sum_probs=60.9

Q ss_pred             CCCCHHHHHhhcc------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecC
Q 038072            4 SGVNFYNHSKKSA------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARG   71 (97)
Q Consensus         4 ~g~~l~~~l~~~~------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg   71 (97)
                      .+++|.+++....            ..+++..+..++.|++.++.|+|+++++|+|++|+||++    ..+..+++.|||
T Consensus        90 ~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili----~~~~~~kl~dfg  165 (288)
T cd05093          90 KHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV----GENLLVKIGDFG  165 (288)
T ss_pred             CCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE----ccCCcEEeccCC
Confidence            4689998886432            238999999999999999999999999999999999999    677889999999


Q ss_pred             ceeeec
Q 038072           72 DKCLHE   77 (97)
Q Consensus        72 ~a~~~~   77 (97)
                      ++....
T Consensus       166 ~~~~~~  171 (288)
T cd05093         166 MSRDVY  171 (288)
T ss_pred             cccccc
Confidence            987554

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.51  E-value=1.9e-13  Score=82.03  Aligned_cols=70  Identities=13%  Similarity=0.138  Sum_probs=62.4

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++....+.+++..+..++.+++.++.|+|+.+++|+|++++|+++    ..+..++++|||.++...
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i----~~~~~~kl~d~g~~~~~~  151 (256)
T cd05114          82 ENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLV----SSTGVVKVSDFGMTRYVL  151 (256)
T ss_pred             CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEE----cCCCeEEECCCCCccccC
Confidence            4789999988654568999999999999999999999999999999999999    667889999999887643

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.51  E-value=1.8e-13  Score=83.47  Aligned_cols=71  Identities=23%  Similarity=0.199  Sum_probs=61.9

Q ss_pred             CCCCCHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKS-AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~-~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++... ...+++..+..++.|++.++.|+|+.+++|+|++++|+++    .....++|+|||++....
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~----~~~~~~~l~Dfg~~~~~~  153 (285)
T cd05605          82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILL----DDYGHIRISDLGLAVEIP  153 (285)
T ss_pred             cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEE----CCCCCEEEeeCCCceecC
Confidence            3578998887653 2358999999999999999999999999999999999999    677889999999987654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.51  E-value=1.4e-13  Score=82.98  Aligned_cols=69  Identities=28%  Similarity=0.293  Sum_probs=61.9

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+++|.+++... +.+++..+..++.|++.++.|+|+.+++|+|++++||++    .....++++|||++....
T Consensus        89 ~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili----~~~~~~~l~dfg~~~~~~  157 (267)
T cd06645          89 GGGSLQDIYHVT-GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILL----TDNGHVKLADFGVSAQIT  157 (267)
T ss_pred             CCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----CCCCCEEECcceeeeEcc
Confidence            468999988765 459999999999999999999999999999999999999    667789999999987654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.50  E-value=1.8e-13  Score=83.03  Aligned_cols=71  Identities=11%  Similarity=0.074  Sum_probs=59.8

Q ss_pred             CCCCCHHHHHhhcc---------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCce
Q 038072            3 SSGVNFYNHSKKSA---------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDK   73 (97)
Q Consensus         3 ~~g~~l~~~l~~~~---------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a   73 (97)
                      ..+++|.+++....         ..+++..+..++.+++.++.|+|+.+++|+|++++||++    +.+..++++|||++
T Consensus        91 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~----~~~~~~~l~dfg~~  166 (277)
T cd05062          91 MTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMT  166 (277)
T ss_pred             CCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEE----cCCCCEEECCCCCc
Confidence            35789999886532         125677888999999999999999999999999999999    67788999999998


Q ss_pred             eeec
Q 038072           74 CLHE   77 (97)
Q Consensus        74 ~~~~   77 (97)
                      ....
T Consensus       167 ~~~~  170 (277)
T cd05062         167 RDIY  170 (277)
T ss_pred             cccC
Confidence            7543

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.50  E-value=4.5e-14  Score=91.07  Aligned_cols=71  Identities=28%  Similarity=0.265  Sum_probs=64.6

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      |.||+|.+++++.+..++..+...++.+.+.|+.|+|+.+++|||+-..|+++    ..+..+||+|||+++...
T Consensus       243 ~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~----~~~~~vKISDFGLs~~~~  313 (474)
T KOG0194|consen  243 CNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLY----SKKGVVKISDFGLSRAGS  313 (474)
T ss_pred             cCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHhee----cCCCeEEeCccccccCCc
Confidence            56899999999986669999999999999999999999999999999999999    666778999999987654

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.50  E-value=1.1e-13  Score=84.34  Aligned_cols=72  Identities=22%  Similarity=0.227  Sum_probs=63.1

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      |+...++|.+++......+++..+..++.|++.|+.|+|+.+++|+|++++||++    ..+..++++|||.++..
T Consensus        82 ~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~----~~~~~~kl~dfg~~~~~  153 (291)
T cd07844          82 FEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLI----SERGELKLADFGLARAK  153 (291)
T ss_pred             EecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEE----cCCCCEEECcccccccc
Confidence            3455678999888765568999999999999999999999999999999999999    66778999999998654

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.50  E-value=2.3e-13  Score=83.06  Aligned_cols=70  Identities=13%  Similarity=0.090  Sum_probs=59.1

Q ss_pred             CCCCHHHHHhhcc---------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCcee
Q 038072            4 SGVNFYNHSKKSA---------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKC   74 (97)
Q Consensus         4 ~g~~l~~~l~~~~---------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~   74 (97)
                      .+++|.+++...+         ..++...+..++.|++.++.|+|+++++|+|++++||++    ..+..++++|||+++
T Consensus        92 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili----~~~~~~~L~Dfg~~~  167 (288)
T cd05061          92 AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV----AHDFTVKIGDFGMTR  167 (288)
T ss_pred             CCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEE----cCCCcEEECcCCccc
Confidence            5789999987531         124567788899999999999999999999999999999    677889999999987


Q ss_pred             eec
Q 038072           75 LHE   77 (97)
Q Consensus        75 ~~~   77 (97)
                      ...
T Consensus       168 ~~~  170 (288)
T cd05061         168 DIY  170 (288)
T ss_pred             ccc
Confidence            543

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.50  E-value=1.1e-13  Score=86.04  Aligned_cols=74  Identities=20%  Similarity=0.226  Sum_probs=63.9

Q ss_pred             CCCCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCC-CCCceEEEeecCcee
Q 038072            1 MASSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGK-DAGFMAKIVARGDKC   74 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~-~~~~~~~i~dfg~a~   74 (97)
                      |...|.+|.++..... +.++...+..++.|++.++.++|+.+.+|||+||+|+.+...+ .....+.+.|||+++
T Consensus       100 M~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar  175 (322)
T KOG1164|consen  100 MSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR  175 (322)
T ss_pred             EeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence            6678999999887654 5699999999999999999999999999999999999995432 122679999999998

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.50  E-value=2.3e-13  Score=83.14  Aligned_cols=70  Identities=16%  Similarity=0.096  Sum_probs=60.9

Q ss_pred             CCCCHHHHHhhcc---------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEe
Q 038072            4 SGVNFYNHSKKSA---------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV   68 (97)
Q Consensus         4 ~g~~l~~~l~~~~---------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~   68 (97)
                      .+++|.+++....               +.+++..+..++.+++.++.++|+++++|+|++++||++    +.+..++++
T Consensus        90 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~----~~~~~~~l~  165 (291)
T cd05094          90 KHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLV----GANLLVKIG  165 (291)
T ss_pred             CCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE----ccCCcEEEC
Confidence            4789999886531               237899999999999999999999999999999999999    677899999


Q ss_pred             ecCceeeec
Q 038072           69 ARGDKCLHE   77 (97)
Q Consensus        69 dfg~a~~~~   77 (97)
                      |||++....
T Consensus       166 dfg~a~~~~  174 (291)
T cd05094         166 DFGMSRDVY  174 (291)
T ss_pred             CCCcccccC
Confidence            999987544

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.50  E-value=4e-14  Score=97.96  Aligned_cols=71  Identities=28%  Similarity=0.321  Sum_probs=59.3

Q ss_pred             CCCCCCCHHHHHhhccccc-CHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            1 MASSGVNFYNHSKKSAKIL-LEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l-~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      |+++..++.+.+-..+... .....+.++++|+.|+.|+|+++++|||+||.||++    +....+||.|||+|..
T Consensus       675 MEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFL----d~~~~VKIGDFGLAt~  746 (1351)
T KOG1035|consen  675 MEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFL----DSRNSVKIGDFGLATD  746 (1351)
T ss_pred             HhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEE----cCCCCeeecccccchh
Confidence            5556666666554443423 477889999999999999999999999999999999    7889999999999986

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.50  E-value=1.4e-13  Score=85.64  Aligned_cols=71  Identities=24%  Similarity=0.262  Sum_probs=62.4

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +..+++|.+++... ..+++..+..++.|++.++.++|..+++|+|++++||++    ..+..++|+|||.+....
T Consensus        86 e~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili----~~~~~~kl~Dfg~a~~~~  156 (332)
T cd07857          86 ELMEADLHQIIRSG-QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLV----NADCELKICDFGLARGFS  156 (332)
T ss_pred             ecccCCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEE----cCCCCEEeCcCCCceecc
Confidence            44567888888765 448999999999999999999999999999999999999    667889999999997654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.50  E-value=1.9e-13  Score=83.36  Aligned_cols=71  Identities=21%  Similarity=0.179  Sum_probs=61.0

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      +..++++.+++......+++..+..++.|++.++.++|+.+++|+|++++||++    ..+..++++|||+++..
T Consensus        83 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~----~~~~~~~l~Dfg~~~~~  153 (291)
T cd07870          83 EYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLI----SYLGELKLADFGLARAK  153 (291)
T ss_pred             ecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE----cCCCcEEEecccccccc
Confidence            445678888776654558888999999999999999999999999999999999    66788999999998754

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.50  E-value=2.3e-13  Score=82.12  Aligned_cols=72  Identities=17%  Similarity=0.213  Sum_probs=63.8

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++....+.+++..+..++.+++.++.++|+.+++|+|++++|+++    ..+..++++|||.+.....
T Consensus        87 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili----~~~~~~~l~dfg~~~~~~~  158 (267)
T cd05066          87 MENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILV----NSNLVCKVSDFGLSRVLED  158 (267)
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEE----CCCCeEEeCCCCccccccc
Confidence            34789999998765668999999999999999999999999999999999999    6678899999999876543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.50  E-value=1.3e-13  Score=88.31  Aligned_cols=92  Identities=24%  Similarity=0.267  Sum_probs=77.9

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc--CccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSH--GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~--~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      |+|.||.-+++.++ -++++++..+.-|++.|+.|+...  .|+|-|+||.||++.++ +....+||.|||++++++...
T Consensus       550 ceGNDLDFYLKQhk-lmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~G-tacGeIKITDFGLSKIMdddS  627 (775)
T KOG1151|consen  550 CEGNDLDFYLKQHK-LMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNG-TACGEIKITDFGLSKIMDDDS  627 (775)
T ss_pred             cCCCchhHHHHhhh-hhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecC-cccceeEeeecchhhhccCCc
Confidence            67899999999873 399999999999999999999864  79999999999999765 557889999999999987644


Q ss_pred             cce-----eeccccCcccccc
Q 038072           81 LLN-----VTGVGEGQVADIS   96 (97)
Q Consensus        81 ~~~-----~~~~~~~~~~~~~   96 (97)
                      .-.     -|..|.|+|+|+.
T Consensus       628 y~~vdGmeLTSQgAGTYWYLP  648 (775)
T KOG1151|consen  628 YNSVDGMELTSQGAGTYWYLP  648 (775)
T ss_pred             cCcccceeeecccCceeeecC
Confidence            332     4678889999974

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.49  E-value=2.7e-13  Score=81.91  Aligned_cols=72  Identities=15%  Similarity=0.059  Sum_probs=63.6

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.+++|.+++.+....+++..+..++.+++.++.++|+.+++|+|++++||++    .....+++.|||++.....
T Consensus        88 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili----~~~~~~~l~d~g~~~~~~~  159 (270)
T cd05056          88 APLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLV----SSPDCVKLGDFGLSRYLED  159 (270)
T ss_pred             CCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEE----ecCCCeEEccCceeeeccc
Confidence            35789999998764558999999999999999999999999999999999999    6677899999999876544

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.49  E-value=2.2e-13  Score=83.77  Aligned_cols=71  Identities=17%  Similarity=0.248  Sum_probs=62.0

Q ss_pred             CCCCHHHHHhhccc-ccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAK-ILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~-~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.+++..... .+++..+..++.+++.++.|+|+.+++|+|++++||++    ..+..++++|||++.....
T Consensus       122 ~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~----~~~~~~~l~dfg~~~~~~~  193 (302)
T cd05055         122 CYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLL----THGKIVKICDFGLARDIMN  193 (302)
T ss_pred             CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEE----cCCCeEEECCCcccccccC
Confidence            57899999876433 38999999999999999999999999999999999999    6677899999999876543

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.49  E-value=3.6e-13  Score=80.67  Aligned_cols=72  Identities=24%  Similarity=0.346  Sum_probs=62.9

Q ss_pred             CCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.+++|.+++.... ..+++.++..++.+++.++.++|+.+++|+|++++||++    +....+++.|||++.....
T Consensus        82 ~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~----~~~~~~~l~df~~~~~~~~  154 (257)
T cd08223          82 CEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFL----TRTNIIKVGDLGIARVLEN  154 (257)
T ss_pred             cCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEE----ecCCcEEEecccceEEecc
Confidence            35789999887642 348999999999999999999999999999999999999    6678899999999986644

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.49  E-value=3.3e-13  Score=81.14  Aligned_cols=70  Identities=17%  Similarity=0.161  Sum_probs=62.4

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+++|.+++......+++..+..++.|++.++.|+|+.+++|+|+++.||++    ..+..++++|||.++...
T Consensus        82 ~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili----~~~~~~kl~d~g~~~~~~  151 (256)
T cd05113          82 SNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLV----DDQGCVKVSDFGLSRYVL  151 (256)
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE----cCCCCEEECCCccceecC
Confidence            4789999988754568999999999999999999999999999999999999    667789999999987653

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.49  E-value=1.7e-13  Score=82.09  Aligned_cols=68  Identities=32%  Similarity=0.428  Sum_probs=61.3

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      .+++|.+++... ..+++..+..++.|++.++.++|+.+++|+|++++||++    ..+..++++|||.+...
T Consensus        81 ~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~----~~~~~~~l~Dfg~~~~~  148 (260)
T PF00069_consen   81 PGGSLQDYLQKN-KPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILL----DENGEVKLIDFGSSVKL  148 (260)
T ss_dssp             TTEBHHHHHHHH-SSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEE----STTSEEEESSGTTTEES
T ss_pred             cccccccccccc-ccccccccccccccccccccccccccccccccccccccc----ccccccccccccccccc
Confidence            355999999844 558999999999999999999999999999999999999    77888999999999864

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.49  E-value=2.6e-13  Score=82.77  Aligned_cols=71  Identities=24%  Similarity=0.228  Sum_probs=61.2

Q ss_pred             CCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      ..+++|.+++.... ..+++..+..++.|++.++.|+|+.+++|+|++++|+++    .....++++|||++....
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili----~~~~~~kl~Dfg~~~~~~  153 (285)
T cd05632          82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILL----DDYGHIRISDLGLAVKIP  153 (285)
T ss_pred             ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE----CCCCCEEEecCCcceecC
Confidence            45788988876532 359999999999999999999999999999999999999    667789999999987643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.49  E-value=2.2e-13  Score=82.71  Aligned_cols=74  Identities=26%  Similarity=0.381  Sum_probs=65.0

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+..|++|.+++......+++..+..++.|++.++.++|+.+++|+|++++||++    .....++++|||.+.....
T Consensus        78 ~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~----~~~~~~~l~dfg~~~~~~~  151 (286)
T cd07832          78 MEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLI----SADGVLKIADFGLARLFSE  151 (286)
T ss_pred             ecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEE----cCCCcEEEeeeeecccccC
Confidence            3455899999987655669999999999999999999999999999999999999    6678899999999886654

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.49  E-value=3.3e-13  Score=80.99  Aligned_cols=71  Identities=17%  Similarity=0.135  Sum_probs=63.4

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .+++|.+++.... .+++..+..++.|++.++.++|..+++|+|++++|+++    +.+..++++|||.++.....
T Consensus        78 ~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili----~~~~~~kl~df~~~~~~~~~  148 (257)
T cd05060          78 PLGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLL----VNRHQAKISDFGMSRALGAG  148 (257)
T ss_pred             CCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEE----cCCCcEEeccccccceeecC
Confidence            5789999998763 58999999999999999999999999999999999999    66788999999999866543

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.49  E-value=2.6e-13  Score=82.51  Aligned_cols=71  Identities=17%  Similarity=0.110  Sum_probs=59.8

Q ss_pred             CCCCHHHHHhhc----------------ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEE
Q 038072            4 SGVNFYNHSKKS----------------AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKI   67 (97)
Q Consensus         4 ~g~~l~~~l~~~----------------~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i   67 (97)
                      .+++|.+++...                +..+++..+..++.+++.++.|+|+++++|+|++++|+++    +.+..+++
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili----~~~~~~kl  165 (283)
T cd05090          90 NQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILI----GEQLHVKI  165 (283)
T ss_pred             CCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEE----cCCCcEEe
Confidence            467898887532                1237888899999999999999999999999999999999    66788999


Q ss_pred             eecCceeeecc
Q 038072           68 VARGDKCLHER   78 (97)
Q Consensus        68 ~dfg~a~~~~~   78 (97)
                      +|||++.....
T Consensus       166 ~dfg~~~~~~~  176 (283)
T cd05090         166 SDLGLSREIYS  176 (283)
T ss_pred             ccccccccccC
Confidence            99999976543

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.49  E-value=2.3e-13  Score=82.12  Aligned_cols=70  Identities=31%  Similarity=0.398  Sum_probs=61.6

Q ss_pred             CCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+++|.+++.... ..+++..+..++.|++.++.|+|+++++|+|++++||++    ..+..++++|||++....
T Consensus        92 ~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili----~~~~~~~l~Dfg~~~~~~  162 (272)
T cd06637          92 GAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL----TENAEVKLVDFGVSAQLD  162 (272)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEE----CCCCCEEEccCCCceecc
Confidence            4679999888643 348999999999999999999999999999999999999    667789999999987654

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.49  E-value=2.7e-14  Score=90.25  Aligned_cols=85  Identities=29%  Similarity=0.257  Sum_probs=74.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||++.++++.. ..+++..+..++++++.|+.|+|.++.+|||+|..|+++    .....+|++|||.+.........
T Consensus        93 ~~gGsv~~lL~~~-~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~----s~~g~vkl~DfgVa~ql~~~~~r  167 (467)
T KOG0201|consen   93 CGGGSVLDLLKSG-NILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILL----SESGDVKLADFGVAGQLTNTVKR  167 (467)
T ss_pred             hcCcchhhhhccC-CCCccceeeeehHHHHHHhhhhhhcceecccccccceeE----eccCcEEEEecceeeeeechhhc
Confidence            4689999999885 436899999999999999999999999999999999999    66789999999999988887777


Q ss_pred             eeeccccCcc
Q 038072           83 NVTGVGEGQV   92 (97)
Q Consensus        83 ~~~~~~~~~~   92 (97)
                      ..++.|||.+
T Consensus       168 r~tfvGTPfw  177 (467)
T KOG0201|consen  168 RKTFVGTPFW  177 (467)
T ss_pred             cccccccccc
Confidence            7788876543

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.49  E-value=9.8e-14  Score=81.19  Aligned_cols=74  Identities=19%  Similarity=0.204  Sum_probs=59.6

Q ss_pred             CCCCCHHHHHhh---cccccCHHHHHHHHHHHHHHHHHHHHc-CccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKK---SAKILLEHEVRRYTRDILRGLDHIHSH-GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~---~~~~l~~~~~~~~~~~i~~~l~~~h~~-~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ....+|..+-++   .++..+|..+-.++..++.|+.|+|++ .++|||+||+||++    +....+|++|||.+.....
T Consensus       126 ~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI----n~~GqVKiCDFGIsG~L~d  201 (282)
T KOG0984|consen  126 LMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI----NYDGQVKICDFGISGYLVD  201 (282)
T ss_pred             HhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE----ccCCcEEEcccccceeehh
Confidence            333444444332   335589999999999999999999986 89999999999999    8899999999999877665


Q ss_pred             CC
Q 038072           79 HG   80 (97)
Q Consensus        79 ~~   80 (97)
                      +-
T Consensus       202 Si  203 (282)
T KOG0984|consen  202 SI  203 (282)
T ss_pred             hh
Confidence            43

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.49  E-value=3.7e-13  Score=80.70  Aligned_cols=71  Identities=21%  Similarity=0.184  Sum_probs=63.1

Q ss_pred             CCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.+++.... ..+++..+..++.|++.++.++|+.+++|+|++++|+++    ..+..++++|||++.....
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~----~~~~~~kl~dfg~~~~~~~  149 (257)
T cd05040          78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILL----ASDDKVKIGDFGLMRALPQ  149 (257)
T ss_pred             CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEE----ecCCEEEeccccccccccc
Confidence            4789999998764 458999999999999999999999999999999999999    6678899999999886644

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.48  E-value=2.1e-13  Score=83.62  Aligned_cols=73  Identities=18%  Similarity=0.201  Sum_probs=63.7

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      |+..+++|.+++......+++..+..++.|++.++.|+|+++++|+|++++||++    .....++++|||++....
T Consensus        98 ~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~----~~~~~~kl~dfg~~~~~~  170 (310)
T cd07865          98 FEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILI----TKDGILKLADFGLARAFS  170 (310)
T ss_pred             EcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE----CCCCcEEECcCCCccccc
Confidence            3455678888887654468999999999999999999999999999999999999    777889999999987654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.48  E-value=3.8e-13  Score=80.81  Aligned_cols=70  Identities=14%  Similarity=0.190  Sum_probs=61.1

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      ..+++|.+++......+++..+..++.+++.|+.|+|+.+++|+|++++||++    .....++++|||+++..
T Consensus        79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili----~~~~~~kl~dfg~~~~~  148 (262)
T cd05058          79 MKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCML----DESFTVKVADFGLARDI  148 (262)
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE----cCCCcEEECCccccccc
Confidence            35689999988754557788888999999999999999999999999999999    66778999999998754

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.48  E-value=3.2e-13  Score=81.61  Aligned_cols=70  Identities=21%  Similarity=0.197  Sum_probs=59.1

Q ss_pred             CCCCHHHHHhhcc----cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSA----KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~----~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+++|.+++....    ..+++..+..++.|++.++.|+|+.+++|+|++++|+++    .....++++|||++....
T Consensus        78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~----~~~~~~kL~dfg~~~~~~  151 (269)
T cd05087          78 PLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLL----TADLTVKIGDYGLSHNKY  151 (269)
T ss_pred             CCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE----cCCCcEEECCcccccccc
Confidence            5789999987532    235677888899999999999999999999999999999    667789999999986543

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.48  E-value=2.4e-13  Score=83.65  Aligned_cols=68  Identities=24%  Similarity=0.352  Sum_probs=59.6

Q ss_pred             CCCCHHHHHhhcc---------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEe
Q 038072            4 SGVNFYNHSKKSA---------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV   68 (97)
Q Consensus         4 ~g~~l~~~l~~~~---------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~   68 (97)
                      .+++|.+++....               ..+++..+..++.|++.|+.|+|+++++|+|++++|+++    +.+..++++
T Consensus        91 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili----~~~~~~kl~  166 (303)
T cd05088          91 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV----GENYVAKIA  166 (303)
T ss_pred             CCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEe----cCCCcEEeC
Confidence            4789999887532               237899999999999999999999999999999999999    677889999


Q ss_pred             ecCceee
Q 038072           69 ARGDKCL   75 (97)
Q Consensus        69 dfg~a~~   75 (97)
                      |||++..
T Consensus       167 dfg~~~~  173 (303)
T cd05088         167 DFGLSRG  173 (303)
T ss_pred             ccccCcc
Confidence            9999863

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.48  E-value=2.5e-13  Score=82.92  Aligned_cols=70  Identities=26%  Similarity=0.319  Sum_probs=62.8

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++... +.+++..+..++.|++.++.++|+.+++|+|+++.||++    ..+..+++.|||++.....
T Consensus        84 ~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili----~~~~~~kl~dfg~~~~~~~  153 (290)
T cd05580          84 PGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLL----DSDGYIKITDFGFAKRVKG  153 (290)
T ss_pred             CCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE----CCCCCEEEeeCCCccccCC
Confidence            389999999876 559999999999999999999999999999999999999    6677899999999876543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.48  E-value=4.3e-13  Score=80.67  Aligned_cols=70  Identities=11%  Similarity=0.150  Sum_probs=62.5

Q ss_pred             CCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++.... ..+++..+..++.+++.++.++|+.+++|+|++++||++    ..+..++++|||++....
T Consensus        84 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~~l~dfg~~~~~~  154 (261)
T cd05068          84 KYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLV----GENNICKVADFGLARVIK  154 (261)
T ss_pred             cCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEE----cCCCCEEECCcceEEEcc
Confidence            3899999987653 348999999999999999999999999999999999999    677889999999998765

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.48  E-value=2.9e-13  Score=82.64  Aligned_cols=55  Identities=20%  Similarity=0.218  Sum_probs=50.6

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072           19 LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        19 l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +++..+..++.|++.++.++|+.+++|+|++++||++    .++..++++|||+++...
T Consensus       124 l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill----~~~~~~kl~dfg~~~~~~  178 (290)
T cd05045         124 LTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLV----AEGRKMKISDFGLSRDVY  178 (290)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEE----cCCCcEEecccccccccc
Confidence            7888999999999999999999999999999999999    667889999999987643

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.48  E-value=4e-13  Score=81.68  Aligned_cols=70  Identities=20%  Similarity=0.228  Sum_probs=61.1

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+++|..++......+++..+..++.|++.++.|+|+.+++|+|++++|+++    ..+..++++|||++....
T Consensus        85 ~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili----~~~~~~kl~dfg~~~~~~  154 (282)
T cd06643          85 AGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILF----TLDGDIKLADFGVSAKNT  154 (282)
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE----ccCCCEEEcccccccccc
Confidence            4678888776544568999999999999999999999999999999999999    667789999999987543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.48  E-value=3.7e-13  Score=82.51  Aligned_cols=68  Identities=18%  Similarity=0.270  Sum_probs=59.3

Q ss_pred             CCCCHHHHHhhcc---------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEe
Q 038072            4 SGVNFYNHSKKSA---------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV   68 (97)
Q Consensus         4 ~g~~l~~~l~~~~---------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~   68 (97)
                      .+++|.+++.+..               ..+++..+..++.|++.|+.++|+++++|+|++++|+++    +.+..++++
T Consensus        86 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill----~~~~~~kl~  161 (297)
T cd05089          86 PYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLV----GENLASKIA  161 (297)
T ss_pred             CCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEE----CCCCeEEEC
Confidence            4689999886532               237889999999999999999999999999999999999    667889999


Q ss_pred             ecCceee
Q 038072           69 ARGDKCL   75 (97)
Q Consensus        69 dfg~a~~   75 (97)
                      |||++..
T Consensus       162 dfg~~~~  168 (297)
T cd05089         162 DFGLSRG  168 (297)
T ss_pred             CcCCCcc
Confidence            9999864

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.48  E-value=1.3e-13  Score=83.53  Aligned_cols=70  Identities=16%  Similarity=0.227  Sum_probs=59.3

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .-|||.+-+..  ..+.|...+.++.|+++|+.|||+.+++|||+|.+||++.+  .+..++|++|||..+..+
T Consensus       105 P~gdL~snv~~--~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~--~df~rvKlcDFG~t~k~g  174 (378)
T KOG1345|consen  105 PRGDLRSNVEA--AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFD--ADFYRVKLCDFGLTRKVG  174 (378)
T ss_pred             ccchhhhhcCc--ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEec--CCccEEEeeecccccccC
Confidence            45777777665  34889999999999999999999999999999999999975  345599999999987544

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.48  E-value=4e-13  Score=80.99  Aligned_cols=69  Identities=28%  Similarity=0.275  Sum_probs=61.4

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+++|.+++... +.+++..+..++.|++.++.|+|+.+++|+|++++|+++    ..+..++++|||++....
T Consensus        89 ~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill----~~~~~~~l~dfg~~~~~~  157 (267)
T cd06646          89 GGGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILL----TDNGDVKLADFGVAAKIT  157 (267)
T ss_pred             CCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE----CCCCCEEECcCccceeec
Confidence            468899988765 458999999999999999999999999999999999999    667789999999998654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.47  E-value=1e-13  Score=85.29  Aligned_cols=76  Identities=26%  Similarity=0.240  Sum_probs=63.0

Q ss_pred             CCCCCHHHHHhhc----ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKS----AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~----~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +..-||.++++-.    .+.++...++.++.|++.|+.|+|+.=|+|||+||.||++.....+...+||+|||+++++.+
T Consensus       109 YAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~  188 (438)
T KOG0666|consen  109 YAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNN  188 (438)
T ss_pred             hhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhc
Confidence            4456788888643    133899999999999999999999999999999999999854324468999999999998664

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.47  E-value=3.7e-13  Score=82.18  Aligned_cols=73  Identities=21%  Similarity=0.244  Sum_probs=63.8

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +...++|.+++......+++..+..++.|++.++.|+|+.+++|+|++++||++    +.+..++++|||.+.....
T Consensus        86 e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili----~~~~~~~l~d~g~~~~~~~  158 (293)
T cd07843          86 EYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLL----NNRGILKICDFGLAREYGS  158 (293)
T ss_pred             hhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE----CCCCcEEEeecCceeeccC
Confidence            445578888887754568999999999999999999999999999999999999    6778899999999886554

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.47  E-value=3.8e-13  Score=82.12  Aligned_cols=71  Identities=23%  Similarity=0.218  Sum_probs=61.6

Q ss_pred             CCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      ..|++|.+++.... ..+++..+..++.|++.++.|+|+.+++|+|++++||++    +....++++|||++....
T Consensus        82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~----~~~~~~~l~Dfg~~~~~~  153 (285)
T cd05630          82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILL----DDHGHIRISDLGLAVHVP  153 (285)
T ss_pred             cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE----CCCCCEEEeeccceeecC
Confidence            35789999886532 348999999999999999999999999999999999999    667789999999987644

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.47  E-value=5.8e-13  Score=79.67  Aligned_cols=73  Identities=32%  Similarity=0.316  Sum_probs=63.7

Q ss_pred             CCCCCHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKS-AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~-~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      ..|++|.+++... ...+++..+..++.+++.++.|+|+.+++|+|++++||++    +.+..++++|||++......
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili----~~~~~~~l~df~~~~~~~~~  154 (256)
T cd08529          81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFL----DAYDNVKIGDLGVAKLLSDN  154 (256)
T ss_pred             CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE----eCCCCEEEcccccceeccCc
Confidence            3578999998775 3458999999999999999999999999999999999999    66788999999998866543

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.47  E-value=4.7e-13  Score=81.39  Aligned_cols=70  Identities=20%  Similarity=0.167  Sum_probs=62.0

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.+++|.+++...  .+++..+..++.+++.++.|+|+.+++|+|++++||++    +.+..++++|||++.....
T Consensus        90 ~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili----~~~~~~~l~dfg~~~~~~~  159 (283)
T cd05080          90 VPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLL----DNDRLVKIGDFGLAKAVPE  159 (283)
T ss_pred             CCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEE----cCCCcEEEeecccccccCC
Confidence            3578999988763  48999999999999999999999999999999999999    6678899999999876543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.47  E-value=5.4e-13  Score=79.70  Aligned_cols=71  Identities=18%  Similarity=0.262  Sum_probs=62.7

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++......+++..+..++.+++.++.++|+++++|+|++++|+++    ..+..++++|||++....
T Consensus        74 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili----~~~~~~~l~d~g~~~~~~  144 (250)
T cd05085          74 VPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLV----GENNVLKISDFGMSRQED  144 (250)
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEE----cCCCeEEECCCccceecc
Confidence            35899999987765568999999999999999999999999999999999999    667789999999987543

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.47  E-value=6.9e-14  Score=91.62  Aligned_cols=86  Identities=20%  Similarity=0.251  Sum_probs=69.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      |.-|.|...|+.. ..+.......|..+|+.++.|+|.+.|||||+|..||++    ..+..+||+|||..+....- -.
T Consensus       194 Ca~GqL~~VLka~-~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLI----s~~d~VKIsDFGTS~e~~~~-ST  267 (904)
T KOG4721|consen  194 CAQGQLYEVLKAG-RPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILI----SYDDVVKISDFGTSKELSDK-ST  267 (904)
T ss_pred             cccccHHHHHhcc-CccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEe----eccceEEeccccchHhhhhh-hh
Confidence            4568999999987 448889999999999999999999999999999999999    66888999999988754432 12


Q ss_pred             eeeccccCcccccc
Q 038072           83 NVTGVGEGQVADIS   96 (97)
Q Consensus        83 ~~~~~~~~~~~~~~   96 (97)
                      .+.++  |+.+||+
T Consensus       268 kMSFa--GTVaWMA  279 (904)
T KOG4721|consen  268 KMSFA--GTVAWMA  279 (904)
T ss_pred             hhhhh--hhHhhhC
Confidence            23334  3566664

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.47  E-value=4.9e-13  Score=79.91  Aligned_cols=70  Identities=19%  Similarity=0.220  Sum_probs=62.0

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++......+++..+..++.+++.++.++|+++++|+|++++||++    +.+..++++|||++....
T Consensus        75 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili----~~~~~~~l~d~g~~~~~~  144 (251)
T cd05041          75 PGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLV----GENNVLKISDFGMSREEE  144 (251)
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEE----cCCCcEEEeecccccccc
Confidence            4789999987654558899999999999999999999999999999999999    677889999999987543

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.47  E-value=5.1e-13  Score=80.89  Aligned_cols=70  Identities=26%  Similarity=0.392  Sum_probs=61.9

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCc-eEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGF-MAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~-~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++... ..+++..+..++.|++.++.++|+.+++|+|++++|+++    .... .++++|||++.....
T Consensus        92 ~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~----~~~~~~~~l~dfg~~~~~~~  162 (267)
T PHA03390         92 KDGDLFDLLKKE-GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLY----DRAKDRIYLCDYGLCKIIGT  162 (267)
T ss_pred             CCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE----eCCCCeEEEecCccceecCC
Confidence            579999999876 369999999999999999999999999999999999999    4445 899999999876543

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.47  E-value=1.4e-13  Score=94.77  Aligned_cols=76  Identities=18%  Similarity=0.232  Sum_probs=66.6

Q ss_pred             CCCCHHHHHhhc------ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKS------AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~------~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .||||.++|++.      ...++...+..++.+++.|+.||++++++|||+...|.++    +....+||+|||+|+...
T Consensus       778 ~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL----~~~r~VKIaDFGlArDiy  853 (1025)
T KOG1095|consen  778 EGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLL----DERRVVKIADFGLARDIY  853 (1025)
T ss_pred             ccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheee----cccCcEEEcccchhHhhh
Confidence            489999999986      4558999999999999999999999999999999999999    778999999999999544


Q ss_pred             cCCcce
Q 038072           78 RHGLLN   83 (97)
Q Consensus        78 ~~~~~~   83 (97)
                      ....+.
T Consensus       854 ~~~yyr  859 (1025)
T KOG1095|consen  854 DKDYYR  859 (1025)
T ss_pred             hchhee
Confidence            444333

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.47  E-value=4e-13  Score=81.54  Aligned_cols=71  Identities=27%  Similarity=0.315  Sum_probs=63.0

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.+++|.+++......+++..+..++.|++.++.|+|+.+++|+|++++|+++    ..+..++++|||.+....
T Consensus        84 ~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili----~~~~~~~l~d~g~~~~~~  154 (280)
T cd06611          84 CDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILL----TLDGDVKLADFGVSAKNK  154 (280)
T ss_pred             cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE----CCCCCEEEccCccchhhc
Confidence            35789999988765669999999999999999999999999999999999999    778889999999876543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.47  E-value=6.2e-13  Score=80.18  Aligned_cols=72  Identities=14%  Similarity=0.146  Sum_probs=63.4

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ..+++|.+++....+.+++..+..++.+++.++.++|+.+++|+|++++||++    ..+..++++|||++.....
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili----~~~~~~kl~dfg~~~~~~~  159 (268)
T cd05063          88 MENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILV----NSNLECKVSDFGLSRVLED  159 (268)
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEE----cCCCcEEECCCccceeccc
Confidence            35689999987765668999999999999999999999999999999999999    6678899999999876543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.47  E-value=5.3e-13  Score=80.60  Aligned_cols=70  Identities=14%  Similarity=0.193  Sum_probs=62.5

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+++|.+++....+.+++..+..++.|++.++.++|+++++|+|++++|+++    +.+..+++.|||++....
T Consensus        88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili----~~~~~~kl~dfg~~~~~~  157 (269)
T cd05065          88 ENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILV----NSNLVCKVSDFGLSRFLE  157 (269)
T ss_pred             CCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEE----cCCCcEEECCCccccccc
Confidence            4789999988765668999999999999999999999999999999999999    677889999999987544

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.47  E-value=4.7e-13  Score=83.31  Aligned_cols=70  Identities=21%  Similarity=0.232  Sum_probs=61.4

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc-CccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSH-GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~-~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++... ..+++..+..++.|++.++.|+|+. +++|+|++++||++    ..+..++|+|||++....
T Consensus        85 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~  155 (331)
T cd06649          85 MDGGSLDQVLKEA-KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILV----NSRGEIKLCDFGVSGQLI  155 (331)
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEE----cCCCcEEEccCccccccc
Confidence            4578999999876 4489999999999999999999985 69999999999999    667789999999987653

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.47  E-value=3.5e-13  Score=82.94  Aligned_cols=74  Identities=22%  Similarity=0.215  Sum_probs=64.3

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+..+++|.+++......+++..+..++.|++.++.++|+.+++|+|++++||++    .....++++|||++.....
T Consensus        87 ~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~----~~~~~~kL~dfg~~~~~~~  160 (309)
T cd07845          87 MEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLL----TDKGCLKIADFGLARTYGL  160 (309)
T ss_pred             EecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----CCCCCEEECccceeeecCC
Confidence            3445678888887755668999999999999999999999999999999999999    6778899999999987553

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.46  E-value=2.9e-13  Score=84.39  Aligned_cols=72  Identities=26%  Similarity=0.321  Sum_probs=63.2

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +..+++|.+++... +.+++..+..++.|++.++.++|+.+++|+|++++|+++    ..+..++|+|||++.....
T Consensus        89 e~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~----~~~~~~kL~Dfg~~~~~~~  160 (337)
T cd07858          89 ELMDTDLHQIIRSS-QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLL----NANCDLKICDFGLARTTSE  160 (337)
T ss_pred             eCCCCCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE----cCCCCEEECcCccccccCC
Confidence            44567888888765 459999999999999999999999999999999999999    6678899999999986544

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.46  E-value=6.1e-13  Score=80.91  Aligned_cols=70  Identities=16%  Similarity=0.098  Sum_probs=60.5

Q ss_pred             CCCCHHHHHhhcc--------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEee
Q 038072            4 SGVNFYNHSKKSA--------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVA   69 (97)
Q Consensus         4 ~g~~l~~~l~~~~--------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~d   69 (97)
                      .+++|.+++....              ..+++..+..++.|++.++.|+|+.+++|+|++++||++    ..+..++++|
T Consensus        90 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~----~~~~~~kL~d  165 (280)
T cd05092          90 RHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLV----GQGLVVKIGD  165 (280)
T ss_pred             CCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEE----cCCCCEEECC
Confidence            4688888886532              237889999999999999999999999999999999999    6678899999


Q ss_pred             cCceeeec
Q 038072           70 RGDKCLHE   77 (97)
Q Consensus        70 fg~a~~~~   77 (97)
                      ||++....
T Consensus       166 fg~~~~~~  173 (280)
T cd05092         166 FGMSRDIY  173 (280)
T ss_pred             CCceeEcC
Confidence            99987654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.46  E-value=5.8e-13  Score=80.83  Aligned_cols=74  Identities=20%  Similarity=0.195  Sum_probs=61.0

Q ss_pred             CCCCCHHHHHhhcc------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            3 SSGVNFYNHSKKSA------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         3 ~~g~~l~~~l~~~~------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      ..|++|.+++....      ..+++..+..++.|++.++.|+|+.+++|+|++++||++... .....++++|||+++..
T Consensus        91 ~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~-~~~~~~kl~dfg~~~~~  169 (277)
T cd05036          91 MAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCK-GPGRVAKIADFGMARDI  169 (277)
T ss_pred             CCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEecc-CCCcceEeccCcccccc
Confidence            34889999987642      248899999999999999999999999999999999999532 22346899999999765


Q ss_pred             c
Q 038072           77 E   77 (97)
Q Consensus        77 ~   77 (97)
                      .
T Consensus       170 ~  170 (277)
T cd05036         170 Y  170 (277)
T ss_pred             C
Confidence            3

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.46  E-value=6.2e-13  Score=81.42  Aligned_cols=71  Identities=13%  Similarity=0.101  Sum_probs=60.3

Q ss_pred             CCCCCHHHHHhhcc----------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCc
Q 038072            3 SSGVNFYNHSKKSA----------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGD   72 (97)
Q Consensus         3 ~~g~~l~~~l~~~~----------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~   72 (97)
                      +.+++|.+++....          ..+++..+..++.+++.++.|+|+.+++|+|++++||++    ..+..++++|||+
T Consensus       101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili----~~~~~~~l~dfg~  176 (296)
T cd05095         101 MENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLV----GKNYTIKIADFGM  176 (296)
T ss_pred             CCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEE----cCCCCEEeccCcc
Confidence            34789999887532          126678899999999999999999999999999999999    6678899999999


Q ss_pred             eeeec
Q 038072           73 KCLHE   77 (97)
Q Consensus        73 a~~~~   77 (97)
                      +....
T Consensus       177 ~~~~~  181 (296)
T cd05095         177 SRNLY  181 (296)
T ss_pred             ccccc
Confidence            87653

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.46  E-value=4.7e-13  Score=80.83  Aligned_cols=74  Identities=14%  Similarity=0.114  Sum_probs=59.3

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCC---CCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGK---DAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~---~~~~~~~i~dfg~a~~~~   77 (97)
                      .+++|..++......+++..+..++.|++.|+.|+|+.+++|+|++++||++....   .....+++.|||.+....
T Consensus        87 ~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~  163 (262)
T cd05077          87 EFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVL  163 (262)
T ss_pred             cCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCcccc
Confidence            46788888776545689999999999999999999999999999999999995321   112238999999886543

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.46  E-value=6.1e-13  Score=81.27  Aligned_cols=70  Identities=21%  Similarity=0.222  Sum_probs=61.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      ..|++|.+++.+....+++..+..++.|++.++.++|+++++|+|++++||++    ..+..++|+|||++...
T Consensus        91 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili----~~~~~~kl~dfg~~~~~  160 (292)
T cd06644          91 CPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLL----TLDGDIKLADFGVSAKN  160 (292)
T ss_pred             CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEE----cCCCCEEEccCccceec
Confidence            35788888776654568999999999999999999999999999999999999    66788999999988754

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.46  E-value=6e-13  Score=79.54  Aligned_cols=73  Identities=18%  Similarity=0.223  Sum_probs=63.8

Q ss_pred             CCCCCHHHHHhhcccc-cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKSAKI-LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~-l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.|++|.+++...... +++..+..++.|++.++.++|+.+++|+|++++||++    +....++++|||++......
T Consensus        83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~----~~~~~~~l~dfg~~~~~~~~  156 (258)
T smart00219       83 MEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLV----GENLVVKISDFGLSRDLYDD  156 (258)
T ss_pred             cCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEE----ccCCeEEEcccCCceecccc
Confidence            3578999998775344 8999999999999999999999999999999999999    66779999999999766543

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.46  E-value=8.7e-13  Score=79.06  Aligned_cols=72  Identities=25%  Similarity=0.318  Sum_probs=62.5

Q ss_pred             CCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .+++|.+++.... ..+++..+..++.+++.++.++|+++++|+|++++||++    ..+..++++|||.+......
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili----~~~~~~~l~dfg~~~~~~~~  153 (255)
T cd08219          81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFL----TQNGKVKLGDFGSARLLTSP  153 (255)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE----CCCCcEEEcccCcceeeccc
Confidence            4789999887542 348999999999999999999999999999999999999    66788999999999876543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.46  E-value=6.5e-13  Score=79.58  Aligned_cols=73  Identities=23%  Similarity=0.311  Sum_probs=63.7

Q ss_pred             CCCCCHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKS-AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~-~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.|++|.+++... ...+++..+..++.+++.++.++|+.+++|+|++++||++    ..+..++++|||++......
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~----~~~~~~kl~d~~~~~~~~~~  154 (256)
T cd08221          81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFL----TKAGLIKLGDFGISKILGSE  154 (256)
T ss_pred             cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEE----eCCCCEEECcCcceEEcccc
Confidence            3578999998775 3448999999999999999999999999999999999999    66778999999999876443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.46  E-value=4.9e-13  Score=81.04  Aligned_cols=72  Identities=29%  Similarity=0.413  Sum_probs=62.5

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +...+++.+.+......+++..+..++.|++.++.++|+.+++|+|++++||++    +. ..+++.|||.+.....
T Consensus        80 e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l----~~-~~~kl~dfg~~~~~~~  151 (282)
T cd07831          80 ELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILI----KD-DILKLADFGSCRGIYS  151 (282)
T ss_pred             ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE----cC-CCeEEEeccccccccc
Confidence            445678888887754568999999999999999999999999999999999999    55 8899999999976543

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.46  E-value=8.3e-13  Score=79.45  Aligned_cols=70  Identities=21%  Similarity=0.247  Sum_probs=61.5

Q ss_pred             CCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+++|.+++.... ..+++..+..++.+++.++.|+|+.+++|+|++++|+++    +.+..+++.|||.+....
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill----~~~~~~~l~dfg~~~~~~  153 (260)
T cd05069          83 GKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILV----GDNLVCKIADFGLARLIE  153 (260)
T ss_pred             CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE----cCCCeEEECCCccceEcc
Confidence            4679999997643 337899999999999999999999999999999999999    778889999999997654

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.46  E-value=1.6e-13  Score=79.93  Aligned_cols=56  Identities=14%  Similarity=0.166  Sum_probs=49.6

Q ss_pred             cccCHHHHHHHHHHHHHHHHHH-HHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072           17 KILLEHEVRRYTRDILRGLDHI-HSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        17 ~~l~~~~~~~~~~~i~~~l~~~-h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      ..+++..+..++.|++.++.++ |+.+++|+|+||+||++.     ...+++.|||+|....
T Consensus       112 ~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-----~~~v~LiDFG~a~~~~  168 (190)
T cd05147         112 APLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-----DGKLYIIDVSQSVEHD  168 (190)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-----CCcEEEEEccccccCC
Confidence            4589999999999999999999 799999999999999993     2569999999997543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.46  E-value=5.6e-13  Score=79.97  Aligned_cols=70  Identities=11%  Similarity=0.202  Sum_probs=61.6

Q ss_pred             CCCCHHHHHhhccc-ccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAK-ILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~-~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+++|.+++..... .+++..+..++.+++.++.++|+++++|+|++++||++    +.+..++++|||++....
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~----~~~~~~kl~dfg~~~~~~  153 (256)
T cd05082          83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLV----SEDNVAKVSDFGLTKEAS  153 (256)
T ss_pred             CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEE----cCCCcEEecCCccceecc
Confidence            46899999876533 38899999999999999999999999999999999999    677889999999987644

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.46  E-value=9.6e-13  Score=79.38  Aligned_cols=71  Identities=20%  Similarity=0.235  Sum_probs=61.8

Q ss_pred             CCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.+++.+.. ..+++..+..++.+++.++.++|+.+++|+|++++||++    ..+..++|+|||.+.....
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill----~~~~~~~L~dfg~~~~~~~  154 (262)
T cd05071          83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV----GENLVCKVADFGLARLIED  154 (262)
T ss_pred             CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEE----cCCCcEEeccCCceeeccc
Confidence            4689999997642 347899999999999999999999999999999999999    6678899999999976543

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.46  E-value=6.2e-13  Score=80.46  Aligned_cols=71  Identities=10%  Similarity=0.051  Sum_probs=60.1

Q ss_pred             CCCCHHHHHhhcc---------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCcee
Q 038072            4 SGVNFYNHSKKSA---------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKC   74 (97)
Q Consensus         4 ~g~~l~~~l~~~~---------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~   74 (97)
                      .+++|.+++....         ..+++..+..++.|++.++.|+|+.+++|+|++++|+++    ..+..++++|||+++
T Consensus        92 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill----~~~~~~kl~dfg~~~  167 (277)
T cd05032          92 AKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMV----AEDLTVKIGDFGMTR  167 (277)
T ss_pred             CCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEE----cCCCCEEECCcccch
Confidence            4789999886521         126788899999999999999999999999999999999    677889999999987


Q ss_pred             eecc
Q 038072           75 LHER   78 (97)
Q Consensus        75 ~~~~   78 (97)
                      ....
T Consensus       168 ~~~~  171 (277)
T cd05032         168 DIYE  171 (277)
T ss_pred             hhcc
Confidence            5443

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.46  E-value=6e-13  Score=80.77  Aligned_cols=70  Identities=19%  Similarity=0.172  Sum_probs=61.2

Q ss_pred             CCCCHHHHHhhcc-------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            4 SGVNFYNHSKKSA-------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         4 ~g~~l~~~l~~~~-------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      .+++|.+++....       ..+++..+..++.+++.|+.|+|+.+++|+|++++|+++    .....++++|||+++..
T Consensus        92 ~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~----~~~~~~kl~d~g~~~~~  167 (280)
T cd05043          92 NWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVI----DEELQVKITDNALSRDL  167 (280)
T ss_pred             CCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEE----cCCCcEEECCCCCcccc
Confidence            4689999887532       348899999999999999999999999999999999999    67788999999999765


Q ss_pred             c
Q 038072           77 E   77 (97)
Q Consensus        77 ~   77 (97)
                      .
T Consensus       168 ~  168 (280)
T cd05043         168 F  168 (280)
T ss_pred             c
Confidence            3

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.46  E-value=4.3e-13  Score=81.43  Aligned_cols=72  Identities=21%  Similarity=0.225  Sum_probs=61.1

Q ss_pred             CCCCCCHHHHHhhcc--cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            2 ASSGVNFYNHSKKSA--KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~--~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +...++|.+++....  ..+++..+..++.|++.|+.|+|+.+++|+|++++||++    ..+..++|+|||++....
T Consensus        79 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~----~~~~~~~l~dfg~~~~~~  152 (285)
T cd07861          79 EFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLI----DNKGVIKLADFGLARAFG  152 (285)
T ss_pred             ecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE----cCCCcEEECcccceeecC
Confidence            344568888876532  448999999999999999999999999999999999999    677889999999987543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.46  E-value=9.4e-13  Score=79.17  Aligned_cols=71  Identities=21%  Similarity=0.262  Sum_probs=62.0

Q ss_pred             CCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.+++.... ..+++..+..++.+++.++.|+|+.+++|+|++++|+++    ..+..+++.|||.+.....
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili----~~~~~~~l~dfg~~~~~~~  154 (260)
T cd05070          83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILV----GDGLVCKIADFGLARLIED  154 (260)
T ss_pred             CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEE----eCCceEEeCCceeeeeccC
Confidence            4789999987642 348999999999999999999999999999999999999    6677899999999976543

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.45  E-value=4.2e-13  Score=83.58  Aligned_cols=71  Identities=28%  Similarity=0.380  Sum_probs=61.6

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +..++++.+++..  +.+++..+..++.|++.++.++|+.+++|+|++++||++    +....++++|||++.....
T Consensus        88 e~~~~~l~~~~~~--~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill----~~~~~~kl~dfg~~~~~~~  158 (336)
T cd07849          88 ELMETDLYKLIKT--QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLL----NTNCDLKICDFGLARIADP  158 (336)
T ss_pred             hhcccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE----CCCCCEEECcccceeeccc
Confidence            4556788887765  458999999999999999999999999999999999999    6778899999999876543

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.45  E-value=8.5e-13  Score=79.64  Aligned_cols=71  Identities=23%  Similarity=0.217  Sum_probs=62.4

Q ss_pred             CCCCCHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKS-AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~-~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.+|+|.+++... ...+++.....++.|++.|+.|+|+.+++|+++++.|+++    +.+..+||+|||++....
T Consensus        83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill----~~~~~~Kl~~f~~~~~~~  154 (259)
T PF07714_consen   83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILL----DSNGQVKLSDFGLSRPIS  154 (259)
T ss_dssp             -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE----ETTTEEEEESTTTGEETT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccc----cccccccccccccccccc
Confidence            3468999999886 4559999999999999999999999999999999999999    667899999999998763

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.45  E-value=3.8e-13  Score=83.71  Aligned_cols=72  Identities=24%  Similarity=0.270  Sum_probs=63.0

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +..+++|.+++... +.+++..+..++.|++.|+.|+|+.+++|+|++++||++    ..+..++|+|||++.....
T Consensus        88 e~~~~~l~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~----~~~~~~kl~dfg~~~~~~~  159 (334)
T cd07855          88 DLMESDLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLV----NEDCELRIGDFGMARGLSS  159 (334)
T ss_pred             ehhhhhHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----cCCCcEEecccccceeecc
Confidence            44567888888765 449999999999999999999999999999999999999    7788899999999987654

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.45  E-value=8.6e-13  Score=80.23  Aligned_cols=72  Identities=24%  Similarity=0.248  Sum_probs=61.3

Q ss_pred             CCCCCHHHHHhh---cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKK---SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~---~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++..   ....+++..+..++.|++.++.|+|+.+++|+|++++||++    .....+++.|||++.....
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili----~~~~~~kl~dfg~~~~~~~  176 (286)
T cd06638         102 CNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILL----TTEGGVKLVDFGVSAQLTS  176 (286)
T ss_pred             cCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEE----CCCCCEEEccCCceeeccc
Confidence            357899888753   22448899999999999999999999999999999999999    6677799999999876543

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.45  E-value=8e-13  Score=80.90  Aligned_cols=71  Identities=13%  Similarity=0.080  Sum_probs=59.7

Q ss_pred             CCCCCHHHHHhhcc-----------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecC
Q 038072            3 SSGVNFYNHSKKSA-----------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARG   71 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-----------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg   71 (97)
                      +.+++|.+++....           ..+++..+..++.+++.++.|+|+.+++|+|++|+|+++    ..+..++++|||
T Consensus        99 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill----~~~~~~kl~dfg  174 (295)
T cd05097          99 MENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLV----GNHYTIKIADFG  174 (295)
T ss_pred             CCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEE----cCCCcEEecccc
Confidence            45789999886431           126788889999999999999999999999999999999    667789999999


Q ss_pred             ceeeec
Q 038072           72 DKCLHE   77 (97)
Q Consensus        72 ~a~~~~   77 (97)
                      ++....
T Consensus       175 ~~~~~~  180 (295)
T cd05097         175 MSRNLY  180 (295)
T ss_pred             cccccc
Confidence            987543

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.45  E-value=8.2e-13  Score=79.81  Aligned_cols=69  Identities=30%  Similarity=0.393  Sum_probs=62.1

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++... +.+++..+..++.|++.++.++|+.+++|+|++++||++    ..+..++++|||++....
T Consensus        91 ~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~----~~~~~~~l~d~~~~~~~~  159 (272)
T cd06629          91 PGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLV----DADGICKISDFGISKKSD  159 (272)
T ss_pred             CCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEE----cCCCeEEEeecccccccc
Confidence            578999999876 458999999999999999999999999999999999999    778889999999987543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.45  E-value=6.4e-13  Score=79.92  Aligned_cols=76  Identities=13%  Similarity=0.103  Sum_probs=61.5

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCC----CCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGK----DAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~----~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.+++|.+++...+..+++.....++.|++.++.|+|+.+++|+|++++||++....    .....++++|||++.....
T Consensus        81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~  160 (258)
T cd05078          81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP  160 (258)
T ss_pred             CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCC
Confidence            457899999987655689999999999999999999999999999999999995321    1112479999998865443

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.45  E-value=6.3e-13  Score=79.75  Aligned_cols=71  Identities=25%  Similarity=0.263  Sum_probs=62.4

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++......+++..+..++.|++.++.|+|+++++|+|++++||++    +.+..++++|||.+.....
T Consensus        83 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i----~~~~~~~l~d~g~~~~~~~  153 (262)
T cd06613          83 GGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILL----TEDGDVKLADFGVSAQLTA  153 (262)
T ss_pred             CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEE----CCCCCEEECccccchhhhh
Confidence            4678888887754569999999999999999999999999999999999999    6678899999999876543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.45  E-value=1.1e-12  Score=79.52  Aligned_cols=71  Identities=14%  Similarity=0.074  Sum_probs=61.2

Q ss_pred             CCCCCHHHHHhhcc-------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEee
Q 038072            3 SSGVNFYNHSKKSA-------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVA   69 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~d   69 (97)
                      ..|++|.+++....             ..+++..+..++.+++.++.++|+.+++|+|++++|+++    +.+..++++|
T Consensus        90 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili----~~~~~~kl~d  165 (280)
T cd05049          90 MEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLV----GYDLVVKIGD  165 (280)
T ss_pred             CCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEE----cCCCeEEECC
Confidence            35789999887531             237888999999999999999999999999999999999    7788999999


Q ss_pred             cCceeeec
Q 038072           70 RGDKCLHE   77 (97)
Q Consensus        70 fg~a~~~~   77 (97)
                      ||++....
T Consensus       166 ~g~~~~~~  173 (280)
T cd05049         166 FGMSRDVY  173 (280)
T ss_pred             cccceecc
Confidence            99987643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.44  E-value=8.2e-13  Score=79.33  Aligned_cols=71  Identities=13%  Similarity=0.194  Sum_probs=62.0

Q ss_pred             CCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.+++|.+++.... ..+++..+..++.+++.++.|+|+++++|+|++++|+++    +.+..++++|||.+....
T Consensus        84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv----~~~~~~kl~d~g~~~~~~  155 (261)
T cd05148          84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILV----GEDLVCKVADFGLARLIK  155 (261)
T ss_pred             cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEE----cCCceEEEccccchhhcC
Confidence            35789999987643 348999999999999999999999999999999999999    677889999999987543

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.44  E-value=4.7e-13  Score=82.02  Aligned_cols=68  Identities=25%  Similarity=0.285  Sum_probs=59.7

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++..  +.+++..+..++.+++.++.|+|+++++|+|++++|+++    +.+..++++|||++....
T Consensus       102 ~~~~L~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill----~~~~~~kL~dfg~~~~~~  169 (292)
T cd06658         102 EGGALTDIVTH--TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILL----TSDGRIKLSDFGFCAQVS  169 (292)
T ss_pred             CCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE----cCCCCEEEccCcchhhcc
Confidence            46788888755  448999999999999999999999999999999999999    667789999999886543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.44  E-value=9.2e-13  Score=79.83  Aligned_cols=71  Identities=15%  Similarity=0.187  Sum_probs=63.8

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.+++|.+++......+++..+..++.+++.++.++|+.+++|+|++++||++    ..+..++++|||.+....
T Consensus        90 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~----~~~~~~~l~dfg~~~~~~  160 (284)
T cd05038          90 LPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILV----ESEDLVKISDFGLAKVLP  160 (284)
T ss_pred             CCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE----cCCCCEEEcccccccccc
Confidence            34789999998765569999999999999999999999999999999999999    667889999999998765

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.44  E-value=1.1e-12  Score=78.80  Aligned_cols=69  Identities=32%  Similarity=0.363  Sum_probs=61.5

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++... +.+++..+..++.+++.++.++|+.+++|+|++++||++    ..+..++|+|||++....
T Consensus        87 ~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv----~~~~~~~l~dfg~~~~~~  155 (263)
T cd06625          87 PGGSVKDQLKAY-GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILR----DSAGNVKLGDFGASKRLQ  155 (263)
T ss_pred             CCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCCEEEeecccceecc
Confidence            578999988775 448999999999999999999999999999999999999    667789999999987654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.44  E-value=8.6e-13  Score=80.49  Aligned_cols=69  Identities=29%  Similarity=0.443  Sum_probs=61.7

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+++|.+++... ..+++..+..++.|++.++.++|+.+++|+|++++||++    +.+..++++|||++....
T Consensus        88 ~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~----~~~~~~kl~dfg~~~~~~  156 (290)
T cd05613          88 NGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILL----DSNGHVVLTDFGLSKEFH  156 (290)
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE----CCCCCEEEeeCccceecc
Confidence            578999998876 458999999999999999999999999999999999999    667889999999987654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.44  E-value=1.2e-12  Score=78.95  Aligned_cols=71  Identities=11%  Similarity=0.119  Sum_probs=62.1

Q ss_pred             CCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.+++.... ..+++..+..++.|++.++.++|+.+++|+|++++||++    ..+..+++.|||++.....
T Consensus        85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~----~~~~~~kl~df~~~~~~~~  156 (263)
T cd05052          85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV----GENHLVKVADFGLSRLMTG  156 (263)
T ss_pred             CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE----cCCCcEEeCCCcccccccc
Confidence            4789999987642 348999999999999999999999999999999999999    6778899999999876543

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.44  E-value=9.9e-13  Score=79.92  Aligned_cols=74  Identities=12%  Similarity=0.032  Sum_probs=60.6

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCC---CCCceEEEeecCceeee
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGK---DAGFMAKIVARGDKCLH   76 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~---~~~~~~~i~dfg~a~~~   76 (97)
                      +.+++|..++....+.+++..+..++.|++.|+.|+|+++++|+|++++||++....   .....+++.|||.+...
T Consensus        98 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~  174 (274)
T cd05076          98 VEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTA  174 (274)
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCcccccc
Confidence            457889888876556689999999999999999999999999999999999995321   12335899999987543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.43  E-value=1.1e-12  Score=78.81  Aligned_cols=70  Identities=23%  Similarity=0.279  Sum_probs=62.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++... +.+++..+..++.|++.++.|+|+.+++|+|+++.||++    .....++++|||++....
T Consensus        79 ~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~----~~~~~~~l~dfg~~~~~~  148 (260)
T cd05611          79 LNGGDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLI----DQTGHLKLTDFGLSRNGL  148 (260)
T ss_pred             cCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE----CCCCcEEEeecccceecc
Confidence            3578999999876 458999999999999999999999999999999999999    667889999999887543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.43  E-value=8.9e-13  Score=82.21  Aligned_cols=69  Identities=19%  Similarity=0.226  Sum_probs=60.5

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc-CccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSH-GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~-~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      +.|++|.+++... +.+++..+..++.+++.++.|+|+. +++|+|++++||++    +.+..++++|||++...
T Consensus        85 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili----~~~~~~kL~Dfg~~~~~  154 (333)
T cd06650          85 MDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV----NSRGEIKLCDFGVSGQL  154 (333)
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEE----cCCCCEEEeeCCcchhh
Confidence            3578999999875 4589999999999999999999975 79999999999999    66778999999998754

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.43  E-value=1.6e-12  Score=83.15  Aligned_cols=55  Identities=18%  Similarity=0.254  Sum_probs=49.3

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072           19 LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        19 l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +++..+..++.|++.|+.|+|+.+++|+|++++||++    .....++++|||+++...
T Consensus       236 l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl----~~~~~~kL~DfGla~~~~  290 (401)
T cd05107         236 LSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLI----CEGKLVKICDFGLARDIM  290 (401)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEE----eCCCEEEEEecCcceecc
Confidence            5667788899999999999999999999999999999    667789999999998654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.43  E-value=2.7e-13  Score=83.24  Aligned_cols=71  Identities=21%  Similarity=0.277  Sum_probs=59.3

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +....+|.+.+.-   .++-..+..++.|++.|++|+|+.+|+|||+||+||++    ..+...||.|||+|+.-...
T Consensus       101 e~m~~nl~~vi~~---elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv----~~~~~lKi~dfg~ar~e~~~  171 (369)
T KOG0665|consen  101 ELMDANLCQVILM---ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVV----NSDCTLKILDFGLARTEDTD  171 (369)
T ss_pred             HhhhhHHHHHHHH---hcchHHHHHHHHHHHHHHHHHHhcceeecccCccccee----cchhheeeccchhhcccCcc
Confidence            3344455555442   27888999999999999999999999999999999999    88899999999999876654

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.43  E-value=1.2e-12  Score=79.26  Aligned_cols=67  Identities=24%  Similarity=0.379  Sum_probs=58.9

Q ss_pred             CCCCHHHHHhhcc---------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEe
Q 038072            4 SGVNFYNHSKKSA---------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV   68 (97)
Q Consensus         4 ~g~~l~~~l~~~~---------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~   68 (97)
                      .+++|.+++....               ..+++..+..++.+++.|+.|+|+.+++|+|++++|+++    ..+..++++
T Consensus        79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili----~~~~~~kl~  154 (270)
T cd05047          79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV----GENYVAKIA  154 (270)
T ss_pred             CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEE----cCCCeEEEC
Confidence            4789999887532               237889999999999999999999999999999999999    778889999


Q ss_pred             ecCcee
Q 038072           69 ARGDKC   74 (97)
Q Consensus        69 dfg~a~   74 (97)
                      |||++.
T Consensus       155 dfgl~~  160 (270)
T cd05047         155 DFGLSR  160 (270)
T ss_pred             CCCCcc
Confidence            999985

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.43  E-value=8.7e-13  Score=80.03  Aligned_cols=72  Identities=19%  Similarity=0.230  Sum_probs=60.9

Q ss_pred             CCCCCCHHHHHhhc---ccccCHHHHHHHHHHHHHHHHHHHHc-CccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            2 ASSGVNFYNHSKKS---AKILLEHEVRRYTRDILRGLDHIHSH-GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         2 ~~~g~~l~~~l~~~---~~~l~~~~~~~~~~~i~~~l~~~h~~-~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +...++|.+++...   +..+++..+..++.|++.++.|+|++ +++|+|++++||++    +.+..++|+|||.+....
T Consensus        80 e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~----~~~~~~kl~dfg~~~~~~  155 (283)
T cd06617          80 EVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLI----NRNGQVKLCDFGISGYLV  155 (283)
T ss_pred             hhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE----CCCCCEEEeecccccccc
Confidence            44567887777642   24489999999999999999999997 99999999999999    777889999999987653

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.43  E-value=1.1e-12  Score=83.75  Aligned_cols=70  Identities=20%  Similarity=0.243  Sum_probs=58.4

Q ss_pred             CCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            5 GVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         5 g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ++++.+++.... ..+++..+..++.|++.++.|+|+.+++|+|++++||++    ..+..++++|||+++....
T Consensus       219 ~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill----~~~~~~kL~DfGla~~~~~  289 (400)
T cd05105         219 DSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLL----AQGKIVKICDFGLARDIMH  289 (400)
T ss_pred             hhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEE----eCCCEEEEEeCCcceeccc
Confidence            345556665432 348999999999999999999999999999999999999    6677899999999986543

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.43  E-value=2.7e-13  Score=88.71  Aligned_cols=68  Identities=21%  Similarity=0.480  Sum_probs=62.1

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      +|-||++++... .+++|.+++.+++|+.-++.+||+++|+|||+|-+|+++    +.+.-+|+.|||.|...
T Consensus       653 ~gIDLFd~IE~k-p~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenviv----d~~g~~klidfgsaa~~  720 (772)
T KOG1152|consen  653 EGIDLFDFIEFK-PRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIV----DSNGFVKLIDFGSAAYT  720 (772)
T ss_pred             CCcchhhhhhcc-CccchHHHHHHHHHHHhccccccccCceecccccccEEE----ecCCeEEEeeccchhhh
Confidence            467999999886 449999999999999999999999999999999999999    88999999999988543

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.43  E-value=8.6e-13  Score=82.71  Aligned_cols=70  Identities=21%  Similarity=0.280  Sum_probs=60.7

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +..+++|.+.+...   +++..+..++.|++.|+.++|+++++|+|++++||++    ..+..++++|||++.....
T Consensus       101 e~~~~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~----~~~~~~kL~Dfg~~~~~~~  170 (353)
T cd07850         101 ELMDANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTAGT  170 (353)
T ss_pred             eccCCCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE----CCCCCEEEccCccceeCCC
Confidence            44566788877653   8999999999999999999999999999999999999    6778899999999986543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.42  E-value=1.4e-12  Score=79.55  Aligned_cols=72  Identities=22%  Similarity=0.360  Sum_probs=60.5

Q ss_pred             CCCCCCHHHHHhhcc----cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCC-CceEEEeecCceeee
Q 038072            2 ASSGVNFYNHSKKSA----KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDA-GFMAKIVARGDKCLH   76 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~----~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~-~~~~~i~dfg~a~~~   76 (97)
                      +...++|.+++....    ..+++..+..++.|++.++.|+|+.+++|+|++++||++    +. +..+++.|||.+...
T Consensus        86 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~----~~~~~~~kl~dfg~~~~~  161 (295)
T cd07837          86 EYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLV----DKQKGLLKIADLGLGRAF  161 (295)
T ss_pred             eccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE----ecCCCeEEEeecccceec
Confidence            444568888876532    337999999999999999999999999999999999999    54 678999999998765


Q ss_pred             c
Q 038072           77 E   77 (97)
Q Consensus        77 ~   77 (97)
                      .
T Consensus       162 ~  162 (295)
T cd07837         162 S  162 (295)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.42  E-value=9.7e-13  Score=87.19  Aligned_cols=54  Identities=28%  Similarity=0.399  Sum_probs=45.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072           21 EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        21 ~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +..+..++.|++.++.|+|+++++|||+||+||++.   .....+||+|||+++...
T Consensus       254 ~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~---~~~~~~KL~DFGlA~~l~  307 (566)
T PLN03225        254 NKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFS---EGSGSFKIIDLGAAADLR  307 (566)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEe---CCCCcEEEEeCCCccccc
Confidence            345667899999999999999999999999999993   235679999999997543

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.42  E-value=1.3e-12  Score=79.81  Aligned_cols=70  Identities=26%  Similarity=0.257  Sum_probs=60.5

Q ss_pred             CCCCHHHHHhh---cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKK---SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~---~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.++++.   ....+++..+..++.|++.++.++|+.+++|+|++++|+++    ..+..++++|||++....
T Consensus       107 ~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili----~~~~~~kl~dfg~~~~~~  179 (291)
T cd06639         107 NGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILL----TTEGGVKLVDFGVSAQLT  179 (291)
T ss_pred             CCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE----cCCCCEEEeecccchhcc
Confidence            47899888763   23458999999999999999999999999999999999999    667789999999987644

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.42  E-value=3.3e-13  Score=81.14  Aligned_cols=74  Identities=15%  Similarity=0.189  Sum_probs=64.2

Q ss_pred             CCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            5 GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         5 g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      ..||+-++...+.+++..+++.++..++.|+.|+|+..++|||.|++|+++    +.+..++++|||+++.+......
T Consensus       107 ehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLI----t~dgilklADFGlar~fs~~~n~  180 (376)
T KOG0669|consen  107 EHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLI----TKDGILKLADFGLARAFSTSKNV  180 (376)
T ss_pred             hhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEE----cCCceEEeeccccccceeccccc
Confidence            357777777665669999999999999999999999999999999999999    77899999999999876654433

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.42  E-value=1.5e-12  Score=78.63  Aligned_cols=71  Identities=15%  Similarity=0.130  Sum_probs=59.2

Q ss_pred             CCCCHHHHHhhc-----ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKS-----AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~-----~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.+++...     ...+++..+..++.|++.++.|+|+.+++|+|++++||++    ..+..++++|||+++....
T Consensus        90 ~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili----~~~~~~kl~dfg~~~~~~~  165 (273)
T cd05074          90 KHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCML----NENMTVCVADFGLSKKIYS  165 (273)
T ss_pred             CCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEE----cCCCCEEECcccccccccC
Confidence            357887776431     1237889999999999999999999999999999999999    6678899999999886543

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.42  E-value=1.4e-12  Score=80.03  Aligned_cols=69  Identities=28%  Similarity=0.304  Sum_probs=61.0

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++.+  ..+++..+..++.+++.++.++|+.+++|+|++++||++    ..+..++++|||++.....
T Consensus        99 ~~~~L~~~~~~--~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili----~~~~~~~l~Dfg~~~~~~~  167 (297)
T cd06656          99 AGGSLTDVVTE--TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILL----GMDGSVKLTDFGFCAQITP  167 (297)
T ss_pred             CCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCCEEECcCccceEccC
Confidence            47899998865  448899999999999999999999999999999999999    6678899999999876543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.42  E-value=1.7e-12  Score=78.83  Aligned_cols=70  Identities=19%  Similarity=0.235  Sum_probs=58.2

Q ss_pred             CCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            5 GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         5 g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      ++.|.++.... ..+++..+..++.|++.++.++|+.+++|+|++++||++    ..+..++++|||++......
T Consensus        84 ~~~l~~~~~~~-~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~----~~~~~~~l~dfg~~~~~~~~  153 (286)
T cd07847          84 HTVLNELEKNP-RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILI----TKQGQIKLCDFGFARILTGP  153 (286)
T ss_pred             ccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEE----cCCCcEEECccccceecCCC
Confidence            34444444433 458999999999999999999999999999999999999    66778999999999876543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.42  E-value=2.4e-12  Score=77.09  Aligned_cols=71  Identities=13%  Similarity=0.105  Sum_probs=62.7

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      ..|++|.+++...++.+++..+..++.+++.++.++|+.+++|+|++++|+++    ..+..++++|||.+....
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i----~~~~~~~l~d~g~~~~~~  151 (256)
T cd05112          81 MEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLV----GENQVVKVSDFGMTRFVL  151 (256)
T ss_pred             CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEE----cCCCeEEECCCcceeecc
Confidence            35788999988765668999999999999999999999999999999999999    667889999999987543

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.42  E-value=1e-12  Score=80.65  Aligned_cols=69  Identities=26%  Similarity=0.289  Sum_probs=60.6

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      ..|++|.+++..  ..+++.++..++.|++.++.|+|+.+++|+|++++||++    +.+..++|+|||.+....
T Consensus        99 ~~~~~L~~~~~~--~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill----~~~~~~kl~dfg~~~~~~  167 (296)
T cd06654          99 LAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL----GMDGSVKLTDFGFCAQIT  167 (296)
T ss_pred             cCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----cCCCCEEECccccchhcc
Confidence            347899998865  458899999999999999999999999999999999999    667789999999887543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.42  E-value=2e-12  Score=89.03  Aligned_cols=70  Identities=24%  Similarity=0.208  Sum_probs=58.8

Q ss_pred             CCCCCHHHHHhhc----------ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCc
Q 038072            3 SSGVNFYNHSKKS----------AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGD   72 (97)
Q Consensus         3 ~~g~~l~~~l~~~----------~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~   72 (97)
                      +.|++|.+++...          ...++...+..++.|++.|+.|+|+++++|+|+||+||++    +....++++|||+
T Consensus        84 ~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILL----d~dg~vKLiDFGL  159 (932)
T PRK13184         84 IEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILL----GLFGEVVILDWGA  159 (932)
T ss_pred             CCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEE----cCCCCEEEEecCc
Confidence            4588999988642          1124566778899999999999999999999999999999    6778899999999


Q ss_pred             eeee
Q 038072           73 KCLH   76 (97)
Q Consensus        73 a~~~   76 (97)
                      ++..
T Consensus       160 Ak~i  163 (932)
T PRK13184        160 AIFK  163 (932)
T ss_pred             ceec
Confidence            9876

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.41  E-value=2.4e-12  Score=77.02  Aligned_cols=71  Identities=28%  Similarity=0.280  Sum_probs=63.1

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.+++......+++..+..++.+++.++.++|..+++|+|+++.|+++    ..+..+++.|||++.....
T Consensus        81 ~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~----~~~~~~~l~dfg~~~~~~~  151 (256)
T cd06612          81 GAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILL----NEEGQAKLADFGVSGQLTD  151 (256)
T ss_pred             CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE----CCCCcEEEcccccchhccc
Confidence            5689999987655668999999999999999999999999999999999999    6677899999999876554

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.41  E-value=9.6e-13  Score=78.45  Aligned_cols=70  Identities=23%  Similarity=0.321  Sum_probs=61.5

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++.+. ..+++..+..++.|++.++.|+|+.+++|+|++|+|+++    ..+..+++.|||.+....
T Consensus        67 ~~~~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~~l~df~~~~~~~  136 (237)
T cd05576          67 AEGGKLWSHISKF-LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILL----DDRGHIQLTYFSRWSEVE  136 (237)
T ss_pred             CCCCCHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE----cCCCCEEEecccchhccc
Confidence            4578999998775 348999999999999999999999999999999999999    677889999999775443

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.41  E-value=1.8e-12  Score=77.70  Aligned_cols=71  Identities=18%  Similarity=0.259  Sum_probs=61.7

Q ss_pred             CCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++.... ..+++..+..++.|++.++.++|+.+++|+|++++|+++    ..+..++++|||++....
T Consensus        80 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili----~~~~~~kl~Dfg~~~~~~  151 (254)
T cd05083          80 MSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILV----SEDGVAKVSDFGLARVGS  151 (254)
T ss_pred             CCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE----cCCCcEEECCCccceecc
Confidence            35789999987653 347899999999999999999999999999999999999    667889999999987543

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.41  E-value=2e-12  Score=77.71  Aligned_cols=71  Identities=18%  Similarity=0.275  Sum_probs=62.0

Q ss_pred             CCCCHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKS-AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~-~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.+++... ...+++..+..++.+++.++.|+|+.+++|+|++++||++    ..+..+++.|||.+.....
T Consensus        84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili----~~~~~~~l~dfg~~~~~~~  155 (261)
T cd05072          84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLV----SESLMCKIADFGLARVIED  155 (261)
T ss_pred             CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEe----cCCCcEEECCCccceecCC
Confidence            578999998754 2448888999999999999999999999999999999999    6678899999999987543

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.41  E-value=1.4e-12  Score=78.56  Aligned_cols=69  Identities=32%  Similarity=0.348  Sum_probs=61.0

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++... ..+++.....++.+++.++.++|+++++|+|++++||++    ..+..++++|||.+....
T Consensus        89 ~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~----~~~~~~~l~Dfg~~~~~~  157 (265)
T cd06652          89 PGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILR----DSVGNVKLGDFGASKRLQ  157 (265)
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEe----cCCCCEEECcCccccccc
Confidence            478999998765 448899999999999999999999999999999999999    667889999999887543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.41  E-value=1.4e-12  Score=79.22  Aligned_cols=70  Identities=31%  Similarity=0.402  Sum_probs=60.5

Q ss_pred             CCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+++|.+++.... ..+++..+..++.|++.++.|+|+++++|+|++++||++    .....+++.|||++....
T Consensus       102 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili----~~~~~~~l~dfg~~~~~~  172 (282)
T cd06636         102 GAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLL----TENAEVKLVDFGVSAQLD  172 (282)
T ss_pred             CCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCCEEEeeCcchhhhh
Confidence            4679999887643 348888999999999999999999999999999999999    667789999999987543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.41  E-value=7.7e-13  Score=76.91  Aligned_cols=57  Identities=16%  Similarity=0.179  Sum_probs=51.1

Q ss_pred             cccCHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           17 KILLEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        17 ~~l~~~~~~~~~~~i~~~l~~~h~-~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ..++...+..++.+++.++.++|. .+++|+|++|+||++    . +..+++.|||++.....
T Consensus       112 ~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll----~-~~~~~liDFG~a~~~~~  169 (190)
T cd05145         112 VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILY----H-DGKPYIIDVSQAVELDH  169 (190)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEE----E-CCCEEEEEcccceecCC
Confidence            447888999999999999999999 999999999999999    4 56799999999987654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.41  E-value=1.3e-12  Score=79.99  Aligned_cols=73  Identities=21%  Similarity=0.263  Sum_probs=62.6

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +...+++.+.+......+++..+..++.|++.|+.|+|+.+++|+|++++||++    ..+..++|+|||.+.....
T Consensus        96 e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili----~~~~~~kl~dfg~~~~~~~  168 (302)
T cd07864          96 EYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL----NNKGQIKLADFGLARLYNS  168 (302)
T ss_pred             cccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----CCCCcEEeCcccccccccC
Confidence            344567777777654558999999999999999999999999999999999999    7778899999999876543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.41  E-value=1.7e-12  Score=78.16  Aligned_cols=71  Identities=23%  Similarity=0.300  Sum_probs=60.9

Q ss_pred             CCCCHHHHHhhc---ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKS---AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~---~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.++++..   ...+++..+..++.+++.++.|+|+++++|+|++++||++    +.+..++++|||++.....
T Consensus        85 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili----~~~~~~~l~dfg~~~~~~~  158 (267)
T cd08229          85 DAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI----TATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             CCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----cCCCCEEECcchhhhcccc
Confidence            468899887642   2348999999999999999999999999999999999999    6677899999998876543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.41  E-value=1.7e-12  Score=78.24  Aligned_cols=69  Identities=32%  Similarity=0.347  Sum_probs=62.1

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+++|.+++... +.+++..+..++.+++.++.++|+.+++|+|++++||++    +.+..++++|||.++...
T Consensus        89 ~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~----~~~~~~~l~dfg~~~~~~  157 (267)
T cd06628          89 PGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILV----DNKGGIKISDFGISKKLE  157 (267)
T ss_pred             CCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEE----cCCCCEEecccCCCcccc
Confidence            578999999876 458999999999999999999999999999999999999    777889999999987665

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.41  E-value=1.2e-12  Score=80.37  Aligned_cols=69  Identities=26%  Similarity=0.259  Sum_probs=60.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.+++|.+++..  ..+++..+..++.|++.++.++|+.+++|+|++++||++    +.+..++|+|||++....
T Consensus       100 ~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill----~~~~~~kL~dfg~~~~~~  168 (297)
T cd06659         100 LQGGALTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILL----TLDGRVKLSDFGFCAQIS  168 (297)
T ss_pred             CCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEE----ccCCcEEEeechhHhhcc
Confidence            356888887765  448999999999999999999999999999999999999    677889999999886443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.40  E-value=3.5e-12  Score=77.25  Aligned_cols=74  Identities=22%  Similarity=0.250  Sum_probs=64.2

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+..+++|.+++......+++..+..++.+++.++.++|+++++|++++++||++    ..+..++|+|||.+.....
T Consensus        77 ~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~----~~~~~~~l~d~g~~~~~~~  150 (282)
T cd07829          77 FEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILI----NRDGVLKLADFGLARAFGI  150 (282)
T ss_pred             ecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEE----cCCCCEEEecCCcccccCC
Confidence            3445678999988754469999999999999999999999999999999999999    6778899999999876543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.40  E-value=2.2e-12  Score=79.58  Aligned_cols=71  Identities=21%  Similarity=0.274  Sum_probs=62.1

Q ss_pred             CCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++.... ..+++..+..++.|++.++.|+|+.+++|+|++++||++    ..+..+++.|||++....
T Consensus        83 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili----~~~~~~~l~dfg~~~~~~  154 (316)
T cd05574          83 CPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILL----HESGHIMLSDFDLSKQSD  154 (316)
T ss_pred             cCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEE----cCCCCEEEeecchhhccc
Confidence            45889999987642 458999999999999999999999999999999999999    667789999999887543

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.40  E-value=2e-12  Score=77.75  Aligned_cols=70  Identities=20%  Similarity=0.276  Sum_probs=62.7

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++.+. ..+++..+..++.|++.++.++|+++++|+|++++||++    ..+..++++|||++.....
T Consensus        76 ~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv----~~~~~~~l~df~~~~~~~~  145 (262)
T cd05572          76 LGGELWTILRDR-GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLL----DSNGYVKLVDFGFAKKLKS  145 (262)
T ss_pred             CCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE----cCCCCEEEeeCCcccccCc
Confidence            578999999875 448999999999999999999999999999999999999    6678899999999876554

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.40  E-value=2.9e-12  Score=79.28  Aligned_cols=72  Identities=28%  Similarity=0.268  Sum_probs=62.1

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +...+++.+.+......+++..+..++.+++.++.++|+.+++|+|++++||++    ..+..++++|||++....
T Consensus       105 e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~----~~~~~~kl~dfg~~~~~~  176 (317)
T cd06635         105 EYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL----TEPGQVKLADFGSASIAS  176 (317)
T ss_pred             eCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEE----CCCCCEEEecCCCccccC
Confidence            445578888877655668999999999999999999999999999999999999    667889999999886543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.40  E-value=7.2e-13  Score=83.09  Aligned_cols=56  Identities=25%  Similarity=0.336  Sum_probs=50.6

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           19 LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        19 l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ..+..+..++.|++.++.|+|+++++|+|++++||++    +.+..++|+|||++.....
T Consensus       165 ~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~~~~kL~DfG~~~~~~~  220 (353)
T PLN00034        165 ADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLI----NSAKNVKIADFGVSRILAQ  220 (353)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE----cCCCCEEEcccccceeccc
Confidence            5677888999999999999999999999999999999    6778899999999987543

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.40  E-value=2.3e-12  Score=78.56  Aligned_cols=70  Identities=13%  Similarity=0.091  Sum_probs=59.6

Q ss_pred             CCCCHHHHHhhcc---------------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCC
Q 038072            4 SGVNFYNHSKKSA---------------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAG   62 (97)
Q Consensus         4 ~g~~l~~~l~~~~---------------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~   62 (97)
                      .+++|.+++....                     ..+++..+..++.+++.++.++|+.+++|+|+++.|+++    ..+
T Consensus        91 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~----~~~  166 (288)
T cd05050          91 AYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLV----GEN  166 (288)
T ss_pred             CCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEe----cCC
Confidence            5678988886431                     126788889999999999999999999999999999999    677


Q ss_pred             ceEEEeecCceeeec
Q 038072           63 FMAKIVARGDKCLHE   77 (97)
Q Consensus        63 ~~~~i~dfg~a~~~~   77 (97)
                      ..++++|||++....
T Consensus       167 ~~~~l~dfg~~~~~~  181 (288)
T cd05050         167 MVVKIADFGLSRNIY  181 (288)
T ss_pred             CceEECccccceecc
Confidence            889999999987643

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.40  E-value=3e-12  Score=78.84  Aligned_cols=71  Identities=28%  Similarity=0.236  Sum_probs=61.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      ...+++.+++....+.+++..+..++.|++.++.|+|+.+++|+|+++.||++    ..+..+++.|||++....
T Consensus        96 ~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~----~~~~~~kL~dfg~~~~~~  166 (307)
T cd06607          96 YCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILL----TEPGTVKLADFGSASLVS  166 (307)
T ss_pred             hhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEE----CCCCCEEEeecCcceecC
Confidence            34567777776554568999999999999999999999999999999999999    677889999999887654

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.40  E-value=3.4e-12  Score=76.80  Aligned_cols=70  Identities=19%  Similarity=0.252  Sum_probs=61.2

Q ss_pred             CCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+++|.+++.+.. ..+++..+..++.+++.++.++|+.+++|+|++++|+++    .....+++.|||.+....
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i----~~~~~~~l~d~~~~~~~~  153 (260)
T cd05073          83 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV----SASLVCKIADFGLARVIE  153 (260)
T ss_pred             CCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE----cCCCcEEECCCcceeecc
Confidence            4689999987642 347888999999999999999999999999999999999    677889999999987654

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.40  E-value=1.6e-12  Score=78.31  Aligned_cols=70  Identities=31%  Similarity=0.323  Sum_probs=60.8

Q ss_pred             CCCCHHHHHhhc---ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKS---AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~---~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+++|.+++...   +..+++..+..++.|++.++.|+|+.+++|+|++++||++    +.+..++++|||++....
T Consensus        92 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~----~~~~~~~l~d~~~~~~~~  164 (275)
T cd06608          92 GGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILL----TKNAEVKLVDFGVSAQLD  164 (275)
T ss_pred             CCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE----ccCCeEEECCCccceecc
Confidence            467888887653   2558999999999999999999999999999999999999    667889999999987644

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.40  E-value=3.8e-12  Score=77.26  Aligned_cols=74  Identities=30%  Similarity=0.366  Sum_probs=64.5

Q ss_pred             CCCCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+..+++|.+.+.... ..+++..+..++.|++.++.++|+.+++|+|+++.||++    +....++++|||.+.....
T Consensus        77 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i----~~~~~~~l~d~~~~~~~~~  151 (283)
T cd07830          77 FEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLV----SGPEVVKIADFGLAREIRS  151 (283)
T ss_pred             EecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE----cCCCCEEEeecccceeccC
Confidence            3445789999887754 358999999999999999999999999999999999999    7788999999999876544

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.40  E-value=2.4e-12  Score=77.15  Aligned_cols=70  Identities=27%  Similarity=0.331  Sum_probs=62.2

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++.... .+++..+..++.|++.++.++|+.+++|+|++++||++    +.+..++++|||++.....
T Consensus        76 ~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~----~~~~~~~l~dfg~~~~~~~  145 (265)
T cd05579          76 PGGDLASLLENVG-SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILI----DSNGHLKLTDFGLSKVGLV  145 (265)
T ss_pred             CCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEE----cCCCCEEEEecccchhccc
Confidence            4789999998763 58999999999999999999999999999999999999    6778899999998876443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.40  E-value=2.3e-12  Score=78.08  Aligned_cols=74  Identities=24%  Similarity=0.359  Sum_probs=64.3

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +..++++.+.+......+++..+..++.+++.++.++|+.+++|+|++++||++    ..+..++++|||.+......
T Consensus        78 e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili----~~~~~~~l~df~~~~~~~~~  151 (283)
T cd05118          78 EFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLI----NTEGVLKLADFGLARSFGSP  151 (283)
T ss_pred             eccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEE----CCCCcEEEeeeeeeEecCCC
Confidence            445678888887754568999999999999999999999999999999999999    66788999999998776543

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.40  E-value=2.9e-12  Score=77.04  Aligned_cols=71  Identities=20%  Similarity=0.221  Sum_probs=62.2

Q ss_pred             CCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      ..+++|.+++.... ..+++..+..++.+++.++.++|+.+++|+|++++|+++    +.+..+++.|||.+....
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i----~~~~~~~l~dfg~~~~~~  153 (260)
T cd05067          82 MENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILV----SETLCCKIADFGLARLIE  153 (260)
T ss_pred             CCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEE----cCCCCEEEccCcceeecC
Confidence            35789999887542 348999999999999999999999999999999999999    677889999999997665

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.40  E-value=3.1e-12  Score=77.66  Aligned_cols=73  Identities=25%  Similarity=0.314  Sum_probs=62.5

Q ss_pred             CCCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +...++|.+++.... ..+++..+..++.+++.|+.++|+.+++|+|++++|+++    ..+..++++|||.+.....
T Consensus        86 e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili----~~~~~~~l~dfg~~~~~~~  159 (287)
T cd07838          86 EHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILV----TSDGQVKIADFGLARIYSF  159 (287)
T ss_pred             hhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEE----ccCCCEEEeccCcceeccC
Confidence            444568888887643 348999999999999999999999999999999999999    6678899999999877644

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.40  E-value=1.6e-12  Score=79.98  Aligned_cols=77  Identities=22%  Similarity=0.188  Sum_probs=61.3

Q ss_pred             CCCCCCHHHHHhhc----ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            2 ASSGVNFYNHSKKS----AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         2 ~~~g~~l~~~l~~~----~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +..++++.+++...    ...+++..+..++.|++.++.|+|+.+++|+|++++||++.........++++|||++....
T Consensus        84 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~  163 (316)
T cd07842          84 DYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFN  163 (316)
T ss_pred             eCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccC
Confidence            44566787776532    12488999999999999999999999999999999999993321227889999999988654


Q ss_pred             c
Q 038072           78 R   78 (97)
Q Consensus        78 ~   78 (97)
                      .
T Consensus       164 ~  164 (316)
T cd07842         164 A  164 (316)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>PHA02988 hypothetical protein; Provisional

Probab=99.40  E-value=1.8e-12  Score=79.18  Aligned_cols=70  Identities=14%  Similarity=0.093  Sum_probs=61.5

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~-~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.||+|.+++.+. +.+++.....++.+++.++.++|+ .+++|+|++++|+++    ..+..+|++|||+++...
T Consensus       104 ~~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill----~~~~~~kl~dfg~~~~~~  174 (283)
T PHA02988        104 CTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLV----TENYKLKIICHGLEKILS  174 (283)
T ss_pred             CCCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEE----CCCCcEEEcccchHhhhc
Confidence            4578999999876 458999999999999999999998 489999999999999    677889999999987543

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.39  E-value=1.9e-12  Score=80.61  Aligned_cols=71  Identities=24%  Similarity=0.248  Sum_probs=61.3

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +...++|.+++...  .+++.....++.|++.++.++|+.+++|+|++++||++    +.+..++++|||.+.....
T Consensus        89 e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill----~~~~~~kl~d~g~~~~~~~  159 (337)
T cd07852          89 EYMETDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILL----NSDCRVKLADFGLARSLSE  159 (337)
T ss_pred             cccccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----cCCCcEEEeeccchhcccc
Confidence            44557888888764  58889999999999999999999999999999999999    7788999999999876543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.39  E-value=3e-12  Score=76.76  Aligned_cols=71  Identities=11%  Similarity=0.200  Sum_probs=62.5

Q ss_pred             CCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.+++|.+++.... ..+++..+..++.|++.++.|+|+++++|+|++++||++    +.+..+++.|||.+....
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili----~~~~~~~l~d~g~~~~~~  153 (256)
T cd05039          82 MAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLV----SEDLVAKVSDFGLAKEAS  153 (256)
T ss_pred             cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEE----eCCCCEEEcccccccccc
Confidence            34689999988753 258999999999999999999999999999999999999    667889999999987654

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.39  E-value=3.7e-12  Score=76.59  Aligned_cols=72  Identities=19%  Similarity=0.298  Sum_probs=61.7

Q ss_pred             CCCCCHHHHHhhc---ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKS---AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~---~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++...   ...+++..+..++.+++.++.++|+.+++|+|++++||++    +.+..+++.|||++.....
T Consensus        84 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~----~~~~~~~l~d~~~~~~~~~  158 (267)
T cd08224          84 ADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFI----TATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             CCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEE----CCCCcEEEeccceeeeccC
Confidence            3578999988642   2348999999999999999999999999999999999999    6677899999999876543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.39  E-value=3.3e-12  Score=77.01  Aligned_cols=74  Identities=18%  Similarity=0.125  Sum_probs=59.1

Q ss_pred             CCCCHHHHHhhc------ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCC-CCCceEEEeecCceeee
Q 038072            4 SGVNFYNHSKKS------AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGK-DAGFMAKIVARGDKCLH   76 (97)
Q Consensus         4 ~g~~l~~~l~~~------~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~-~~~~~~~i~dfg~a~~~   76 (97)
                      .|++|.+++...      ...+++..+..++.+++.++.|+|+.+++|+|++++||++.... .....++++|||++...
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~  161 (269)
T cd05044          82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDI  161 (269)
T ss_pred             CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccccccc
Confidence            578999988642      12278889999999999999999999999999999999994321 11237999999998754


Q ss_pred             c
Q 038072           77 E   77 (97)
Q Consensus        77 ~   77 (97)
                      .
T Consensus       162 ~  162 (269)
T cd05044         162 Y  162 (269)
T ss_pred             c
Confidence            3

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.39  E-value=3.2e-12  Score=77.14  Aligned_cols=72  Identities=26%  Similarity=0.285  Sum_probs=60.1

Q ss_pred             CCCCCHHHHHhhccccc--CHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKIL--LEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l--~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      ..|++|.+++......+  ++..+..++.|++.++.|+|+.+++|+|++++||++.   .....++++|||.+....
T Consensus        87 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~---~~~~~~~l~dfg~~~~~~  160 (268)
T cd06624          87 VPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVN---TYSGVVKISDFGTSKRLA  160 (268)
T ss_pred             CCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc---CCCCeEEEecchhheecc
Confidence            35789999987643445  8888899999999999999999999999999999993   225679999999987543

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.39  E-value=2.5e-12  Score=78.97  Aligned_cols=69  Identities=23%  Similarity=0.282  Sum_probs=60.9

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      ..|++|.+++..  ..+++.++..++.+++.++.++|+.+++|+|++++||++    +.+..++++|||++....
T Consensus        98 ~~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili----~~~~~~kl~dfg~~~~~~  166 (296)
T cd06655          98 LAGGSLTDVVTE--TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLL----GMDGSVKLTDFGFCAQIT  166 (296)
T ss_pred             cCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCCEEEccCccchhcc
Confidence            357889988875  348999999999999999999999999999999999999    667889999999887544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.39  E-value=2.5e-12  Score=79.08  Aligned_cols=67  Identities=22%  Similarity=0.255  Sum_probs=60.6

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      .|++|.+++... +.+++..+..++.+++.++.|+|+.+++|+|+++.||++    .....++++|||.++.
T Consensus        84 ~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll----~~~~~~~l~dfg~~~~  150 (305)
T cd05609          84 EGGDCATLLKNI-GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLI----TSMGHIKLTDFGLSKI  150 (305)
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEE----CCCCCEEEeeCCCccc
Confidence            478999999776 458999999999999999999999999999999999999    6778899999998864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.39  E-value=3e-12  Score=76.35  Aligned_cols=73  Identities=22%  Similarity=0.262  Sum_probs=63.7

Q ss_pred             CCCCCHHHHHhhc---ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKS---AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~---~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.|++|.+.+...   ...+++..+..++.+++.++.++|+.+++|+|++++|+++    +.+..+++.|||++......
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~----~~~~~~~l~d~~~~~~~~~~  156 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFL----TSNGLVKLGDFGISKVLSST  156 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEE----cCCCcEEECCccceeecccC
Confidence            3578999988764   2558999999999999999999999999999999999999    66788999999999876554

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.39  E-value=3.2e-12  Score=77.91  Aligned_cols=70  Identities=31%  Similarity=0.420  Sum_probs=61.6

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++... ..+++..+..++.|++.++.++|+.+++|+|+++.||++    ..+..++++|||+++....
T Consensus        88 ~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~----~~~~~~~l~dfg~~~~~~~  157 (288)
T cd05583          88 NGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILL----DSEGHVVLTDFGLSKEFLA  157 (288)
T ss_pred             CCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE----CCCCCEEEEECcccccccc
Confidence            468999988765 458999999999999999999999999999999999999    6677899999999876544

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.39  E-value=3.3e-12  Score=76.73  Aligned_cols=70  Identities=23%  Similarity=0.250  Sum_probs=62.3

Q ss_pred             CCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+++|.+++.... ..+++..+..++.+++.++.++|+.+++|+|++++|+++    ..+..++++|||.+....
T Consensus        84 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili----~~~~~~~l~d~g~~~~~~  154 (261)
T cd05034          84 SKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILV----GENLVCKIADFGLARLIE  154 (261)
T ss_pred             CCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEE----cCCCCEEECccccceecc
Confidence            5789999987753 348999999999999999999999999999999999999    778899999999987654

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.39  E-value=6e-13  Score=89.37  Aligned_cols=74  Identities=15%  Similarity=0.204  Sum_probs=68.2

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      |++  |+|.++|+++.+.|..-++..+++.|+.|++||-+.+.+|||+...||++    +.+..+|++|||+++......
T Consensus       712 MEN--GsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILV----NsnLvCKVsDFGLSRvledd~  785 (996)
T KOG0196|consen  712 MEN--GSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILV----NSNLVCKVSDFGLSRVLEDDP  785 (996)
T ss_pred             hhC--CcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheee----ccceEEEeccccceeecccCC
Confidence            555  99999999998889999999999999999999999999999999999999    889999999999999775544

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.39  E-value=2.1e-12  Score=80.09  Aligned_cols=73  Identities=25%  Similarity=0.293  Sum_probs=63.6

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +..+++|.+++... ..+++..+..++.+++.++.++|+.+++|+|+++.||++    ..+..++++|||.+......
T Consensus        84 e~~~~~l~~~l~~~-~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili----~~~~~~~L~dfg~~~~~~~~  156 (330)
T cd07834          84 ELMETDLHKVIKSP-QPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILV----NSNCDLKICDFGLARGVDPD  156 (330)
T ss_pred             cchhhhHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCCEEEcccCceEeeccc
Confidence            44556788888765 369999999999999999999999999999999999999    66789999999999876654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.38  E-value=2.5e-12  Score=77.50  Aligned_cols=71  Identities=21%  Similarity=0.293  Sum_probs=60.5

Q ss_pred             CCCCHHHHHhh---cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKK---SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~---~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.+++..   ....+++..+..++.+++.|+.|+|+++++|+|++++||++    +.+..++++|||++.....
T Consensus        85 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~----~~~~~~~l~d~g~~~~~~~  158 (267)
T cd08228          85 DAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFI----TATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             CCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEE----cCCCCEEECccccceeccc
Confidence            46788888753   22347899999999999999999999999999999999999    6677899999999876543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.38  E-value=2.1e-12  Score=80.72  Aligned_cols=70  Identities=29%  Similarity=0.355  Sum_probs=62.1

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +..|++|.+++..  ..+++..+..++.|++.++.++|+.+++|+|++++||++    ..+..++++|||++....
T Consensus       100 e~~~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill----~~~~~~kL~dfg~~~~~~  169 (343)
T cd07851         100 HLMGADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV----NEDCELKILDFGLARHTD  169 (343)
T ss_pred             ecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE----CCCCCEEEcccccccccc
Confidence            4457889888876  459999999999999999999999999999999999999    667889999999987654

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.38  E-value=2.5e-12  Score=86.99  Aligned_cols=84  Identities=29%  Similarity=0.303  Sum_probs=72.6

Q ss_pred             CCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCc
Q 038072            3 SSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGL   81 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~   81 (97)
                      |.||+.-++++... .++.|..+..+++.++.|+.++|...++|||+|=.||++    +.+..+|++|||+....+..-.
T Consensus       103 C~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLL----T~e~~VKLvDFGvSaQldsT~g  178 (953)
T KOG0587|consen  103 CGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLL----TENAEVKLVDFGVSAQLDSTVG  178 (953)
T ss_pred             cCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEE----eccCcEEEeeeeeeeeeecccc
Confidence            67899999988643 449999999999999999999999999999999999999    7789999999999988776655


Q ss_pred             ceeeccccC
Q 038072           82 LNVTGVGEG   90 (97)
Q Consensus        82 ~~~~~~~~~   90 (97)
                      ...|++|+|
T Consensus       179 rRnT~iGtP  187 (953)
T KOG0587|consen  179 RRNTFIGTP  187 (953)
T ss_pred             cccCcCCCc
Confidence            555666554

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.38  E-value=3.4e-12  Score=77.03  Aligned_cols=68  Identities=32%  Similarity=0.355  Sum_probs=60.5

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      .+++|.+++... ..+++.....++.|++.++.++|+.+++|+|++++||++    +.+..++++|||++...
T Consensus        89 ~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~----~~~~~~~l~dfg~~~~~  156 (266)
T cd06651          89 PGGSVKDQLKAY-GALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILR----DSAGNVKLGDFGASKRL  156 (266)
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE----CCCCCEEEccCCCcccc
Confidence            468899988775 448999999999999999999999999999999999999    66778999999998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.38  E-value=2.1e-12  Score=80.89  Aligned_cols=70  Identities=27%  Similarity=0.321  Sum_probs=60.9

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +..|++|.+++..  ..+++..+..++.|++.|+.|+|+.+++|+|++++||++    ..+..++++|||++....
T Consensus       102 ~~~~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll----~~~~~~kl~dfg~~~~~~  171 (345)
T cd07877         102 HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV----NEDCELKILDFGLARHTD  171 (345)
T ss_pred             hhcccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE----cCCCCEEEeccccccccc
Confidence            3457888888765  348999999999999999999999999999999999999    667789999999987543

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.38  E-value=3.4e-12  Score=77.41  Aligned_cols=74  Identities=22%  Similarity=0.310  Sum_probs=64.2

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +..+++|.+++......+++..+..++.+++.|+.++|..+++|+|++++|+++    +.+..++++|||.+......
T Consensus        80 e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~----~~~~~~~l~d~g~~~~~~~~  153 (287)
T cd07840          80 EYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILI----NNDGVLKLADFGLARPYTKR  153 (287)
T ss_pred             ccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE----cCCCCEEEccccceeeccCC
Confidence            444568888887654569999999999999999999999999999999999999    77888999999999876554

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.38  E-value=4.5e-12  Score=76.80  Aligned_cols=70  Identities=27%  Similarity=0.291  Sum_probs=62.0

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .|++|.+++..  +.+++..+..++.+++.++.++|+.+++|+|++++||++    .....++++|||.+......
T Consensus        85 ~~~~L~~~~~~--~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i----~~~~~~~l~dfg~~~~~~~~  154 (277)
T cd06917          85 EGGSVRTLMKA--GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILV----TNTGNVKLCDFGVAALLNQN  154 (277)
T ss_pred             CCCcHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEE----cCCCCEEEccCCceeecCCC
Confidence            47899998866  358999999999999999999999999999999999999    66788999999998776543

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.38  E-value=5.3e-12  Score=75.53  Aligned_cols=70  Identities=31%  Similarity=0.344  Sum_probs=62.2

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++... +.+++..+..++.|++.++.++|+.+++|+|++++||++    ..+..++|+|||.+.....
T Consensus        85 ~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~----~~~~~~kl~d~~~~~~~~~  154 (258)
T cd06632          85 PGGSLAKLLKKY-GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILV----DTNGVVKLADFGMAKQVVE  154 (258)
T ss_pred             CCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCCEEEccCccceeccc
Confidence            478999998875 448999999999999999999999999999999999999    6778899999999876544

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.38  E-value=2e-12  Score=80.91  Aligned_cols=70  Identities=23%  Similarity=0.320  Sum_probs=61.1

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +..|++|.+++..  ..+++..+..++.|++.++.++|+.+++|+|++++||++    ..+..++++|||++....
T Consensus       100 e~~~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill----~~~~~~kl~dfg~~~~~~  169 (343)
T cd07880         100 PFMGTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAV----NEDCELKILDFGLARQTD  169 (343)
T ss_pred             ecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCCEEEeecccccccc
Confidence            4557788888764  458999999999999999999999999999999999999    667789999999987543

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.38  E-value=3.1e-12  Score=78.32  Aligned_cols=73  Identities=26%  Similarity=0.242  Sum_probs=61.9

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~-~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      |++.++++.+++......+++..+..++.+++.++.|+|+ .+++|+|++++||++    +.+..++|.|||++....
T Consensus        93 ~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill----~~~~~~kL~dfg~~~~~~  166 (296)
T cd06618          93 MELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILL----DASGNVKLCDFGISGRLV  166 (296)
T ss_pred             eeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEE----cCCCCEEECccccchhcc
Confidence            3556677778777654568999999999999999999997 599999999999999    667889999999986543

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.37  E-value=5.2e-12  Score=75.33  Aligned_cols=72  Identities=26%  Similarity=0.260  Sum_probs=63.3

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      .+++|.+++... +.+++..+..++.+++.++.++|+.+++|+|++++||++    ..+..++++|||.+.......
T Consensus        82 ~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i----~~~~~~~l~d~~~~~~~~~~~  153 (254)
T cd06627          82 ENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILT----TKDGVVKLADFGVATKLNDVS  153 (254)
T ss_pred             CCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE----CCCCCEEEeccccceecCCCc
Confidence            467899988876 559999999999999999999999999999999999999    667889999999998765433

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.37  E-value=3e-12  Score=77.75  Aligned_cols=71  Identities=18%  Similarity=0.228  Sum_probs=61.2

Q ss_pred             CCCCCCHHHHHhhcc--cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            2 ASSGVNFYNHSKKSA--KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~--~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      +...++|.+++....  ..+++..+..++.|++.++.|+|+.+++|+|++++||++    ..+..++++|||.+...
T Consensus        78 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~----~~~~~~~l~d~g~~~~~  150 (284)
T cd07836          78 EYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLI----NKRGELKLADFGLARAF  150 (284)
T ss_pred             ecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE----CCCCcEEEeecchhhhh
Confidence            445578888887643  348999999999999999999999999999999999999    77788999999988654

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.37  E-value=7.6e-12  Score=74.61  Aligned_cols=70  Identities=29%  Similarity=0.356  Sum_probs=62.5

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.+++... ..+++..+..++.|++.++.++|+.+++|+++++.||++    .....++++|||.+.....
T Consensus        76 ~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~----~~~~~~~l~d~~~~~~~~~  145 (250)
T cd05123          76 PGGELFSHLSKE-GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILL----DADGHIKLTDFGLAKELSS  145 (250)
T ss_pred             CCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEE----cCCCcEEEeecCcceeccc
Confidence            388999999876 348999999999999999999999999999999999999    6677899999999877554

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.37  E-value=3.3e-12  Score=76.55  Aligned_cols=73  Identities=25%  Similarity=0.239  Sum_probs=63.1

Q ss_pred             CCCCHHHHHhhc---ccccCHHHHHHHHHHHHHHHHHHH-----HcCccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            4 SGVNFYNHSKKS---AKILLEHEVRRYTRDILRGLDHIH-----SHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         4 ~g~~l~~~l~~~---~~~l~~~~~~~~~~~i~~~l~~~h-----~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      .+++|.+++...   ...+++..+..++.+++.++.++|     +.+++|+|++++||++    ..+..+++.|||++..
T Consensus        84 ~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili----~~~~~~kl~d~g~~~~  159 (265)
T cd08217          84 EGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFL----DANNNVKLGDFGLAKI  159 (265)
T ss_pred             cCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEE----ecCCCEEEeccccccc
Confidence            478999988653   345899999999999999999999     8999999999999999    6678999999999887


Q ss_pred             eccCC
Q 038072           76 HERHG   80 (97)
Q Consensus        76 ~~~~~   80 (97)
                      .....
T Consensus       160 ~~~~~  164 (265)
T cd08217         160 LGHDS  164 (265)
T ss_pred             ccCCc
Confidence            65433

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.37  E-value=4.6e-12  Score=76.66  Aligned_cols=70  Identities=13%  Similarity=0.079  Sum_probs=60.8

Q ss_pred             CCCCCHHHHHhhcc--------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCcee
Q 038072            3 SSGVNFYNHSKKSA--------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKC   74 (97)
Q Consensus         3 ~~g~~l~~~l~~~~--------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~   74 (97)
                      +.+++|.+++....        ..+++..+..++.|++.++.|+|+.+++|+|++++|+++    .....++++|||++.
T Consensus        90 ~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili----~~~~~~~l~~~~~~~  165 (275)
T cd05046          90 TDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLV----SSQREVKVSLLSLSK  165 (275)
T ss_pred             cCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEE----eCCCcEEEccccccc
Confidence            34789999987653        148999999999999999999999999999999999999    667789999999886


Q ss_pred             ee
Q 038072           75 LH   76 (97)
Q Consensus        75 ~~   76 (97)
                      ..
T Consensus       166 ~~  167 (275)
T cd05046         166 DV  167 (275)
T ss_pred             cc
Confidence            43

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.37  E-value=4e-12  Score=76.84  Aligned_cols=70  Identities=30%  Similarity=0.389  Sum_probs=62.9

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.+++... ..+++..+..++.|++.++.++|+.+++|+|++++|+++    ..+..++++|||++.....
T Consensus        85 ~~~~L~~~l~~~-~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i----~~~~~~~l~df~~~~~~~~  154 (280)
T cd05581          85 PNGELLQYIRKY-GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILL----DKDMHIKITDFGTAKVLDP  154 (280)
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE----CCCCCEEecCCccccccCC
Confidence            389999999876 459999999999999999999999999999999999999    6677899999999876543

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.37  E-value=5e-12  Score=77.97  Aligned_cols=73  Identities=26%  Similarity=0.256  Sum_probs=62.2

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +...+++.+++......+++..+..++.+++.++.++|+.+++|+|+++.||++    ..+..+++.|||++.....
T Consensus        95 e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~----~~~~~~kl~dfg~~~~~~~  167 (308)
T cd06634          95 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL----SEPGLVKLGDFGSASIMAP  167 (308)
T ss_pred             EccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEE----CCCCcEEECCcccceeecC
Confidence            344578888776654568999999999999999999999999999999999999    6678899999999876543

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.37  E-value=5.6e-12  Score=76.75  Aligned_cols=70  Identities=19%  Similarity=0.245  Sum_probs=60.3

Q ss_pred             CCCCCHHHHHhhc--ccccCHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            3 SSGVNFYNHSKKS--AKILLEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         3 ~~g~~l~~~l~~~--~~~l~~~~~~~~~~~i~~~l~~~h~-~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      +.|++|.+++...  ...+++..+..++.+++.++.|+|+ .+++|+|++++||++    ..+..++++|||.+...
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~----~~~~~~~l~dfg~~~~~  153 (286)
T cd06622          81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLV----NGNGQVKLCDFGVSGNL  153 (286)
T ss_pred             cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEE----CCCCCEEEeecCCcccc
Confidence            3578898888763  2358999999999999999999997 599999999999999    66788999999998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.37  E-value=6.4e-13  Score=81.77  Aligned_cols=85  Identities=26%  Similarity=0.242  Sum_probs=71.4

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      |..|+..++++-+.+.+.+.++..+++..+.++.|+|...-+|||+|..||++    +.....|++|||.|.........
T Consensus       110 CGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILL----NT~G~AKLADFGVAGQLTDTMAK  185 (502)
T KOG0574|consen  110 CGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILL----NTDGIAKLADFGVAGQLTDTMAK  185 (502)
T ss_pred             cCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEE----cccchhhhhhccccchhhhhHHh
Confidence            34589999998877789999999999999999999999999999999999999    77888999999999776654444


Q ss_pred             eeeccccCc
Q 038072           83 NVTGVGEGQ   91 (97)
Q Consensus        83 ~~~~~~~~~   91 (97)
                      ..|-.|+|.
T Consensus       186 RNTVIGTPF  194 (502)
T KOG0574|consen  186 RNTVIGTPF  194 (502)
T ss_pred             hCccccCcc
Confidence            445555543

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.37  E-value=4.7e-12  Score=78.07  Aligned_cols=68  Identities=24%  Similarity=0.281  Sum_probs=60.5

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~-~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      .|++|.+++... +.+++..+..++.|++.++.|+|+ .+++|+|++++|+++    +.+..++++|||++...
T Consensus        82 ~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~----~~~~~~~l~dfg~~~~~  150 (308)
T cd06615          82 DGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILV----NSRGEIKLCDFGVSGQL  150 (308)
T ss_pred             CCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEE----ecCCcEEEccCCCcccc
Confidence            578999999876 558999999999999999999997 589999999999999    66778999999988654

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.36  E-value=4.7e-12  Score=77.29  Aligned_cols=68  Identities=24%  Similarity=0.287  Sum_probs=60.4

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++..  +.+++..+..++.|++.++.++|+++++|+|++++||++    +.+..++++|||.+....
T Consensus        99 ~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~~l~d~g~~~~~~  166 (285)
T cd06648          99 EGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILL----TSDGRVKLSDFGFCAQVS  166 (285)
T ss_pred             CCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEE----cCCCcEEEcccccchhhc
Confidence            47899998877  458999999999999999999999999999999999999    677889999999876543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>PRK10345 hypothetical protein; Provisional

Probab=99.36  E-value=4.1e-12  Score=75.04  Aligned_cols=69  Identities=12%  Similarity=0.155  Sum_probs=52.1

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHH-HHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGL-DHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l-~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      .+++|.+++++.  .+++.  ..++.+++.++ .|+|+++|+|+|+||+||++.........++|+||+.+...
T Consensus        90 ~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~~  159 (210)
T PRK10345         90 PSITLTEFAEQC--RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGESTF  159 (210)
T ss_pred             cchhHHHHHHcc--cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcce
Confidence            458999999763  36655  35577777777 89999999999999999999654334568999995444433

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.36  E-value=4.5e-12  Score=77.04  Aligned_cols=74  Identities=23%  Similarity=0.232  Sum_probs=60.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      ..++.+.+.+......+++..+..++.+++.++.++|..+++|+|++++||++    ..+..++++|||++.......
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~----~~~~~~kl~d~g~~~~~~~~~  154 (288)
T cd07833          81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILV----SESGVLKLCDFGFARALRARP  154 (288)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE----CCCCCEEEEeeecccccCCCc
Confidence            33445545444433558999999999999999999999999999999999999    778889999999987765543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.36  E-value=7e-12  Score=74.98  Aligned_cols=72  Identities=25%  Similarity=0.312  Sum_probs=61.1

Q ss_pred             CCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++.... ..+++..+..++.+++.++.++|+++++|+|++++||++.   ..+..+++.|||++.....
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~---~~~~~~~l~d~~~~~~~~~  154 (256)
T cd08220          82 PGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLD---KHKMVVKIGDFGISKILSS  154 (256)
T ss_pred             CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEEccCCCceecCC
Confidence            4789999997743 3489999999999999999999999999999999999993   2345689999999986543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.36  E-value=5.4e-12  Score=76.40  Aligned_cols=70  Identities=27%  Similarity=0.264  Sum_probs=62.8

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .+++|.+++...  .+++..+..++.|++.++.++|+++++|+|++++|+++    ..+..+++.|||.++.....
T Consensus        82 ~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i----~~~~~~~l~d~g~~~~~~~~  151 (274)
T cd06609          82 GGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILL----SEEGDVKLADFGVSGQLTST  151 (274)
T ss_pred             CCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE----CCCCCEEEcccccceeeccc
Confidence            578999998864  68999999999999999999999999999999999999    77888999999999876543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.36  E-value=5.9e-12  Score=75.57  Aligned_cols=71  Identities=27%  Similarity=0.292  Sum_probs=63.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++... ..+++..+..++.+++.++.|+|+.+++|+|++++||++    +.+..++++|||.+.....
T Consensus        82 ~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~----~~~~~~~l~d~~~~~~~~~  152 (258)
T cd05578          82 LLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILL----DEQGHVHITDFNIATKVTP  152 (258)
T ss_pred             CCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE----cCCCCEEEeecccccccCC
Confidence            3578999998875 468999999999999999999999999999999999999    6778899999999876544

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.36  E-value=6.3e-12  Score=74.65  Aligned_cols=72  Identities=28%  Similarity=0.410  Sum_probs=63.8

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .|++|.+++......+++..+..++.+++.++.++|..+++|+|+++.||++    ..+..++|.|||.+......
T Consensus        80 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i----~~~~~~~l~d~~~~~~~~~~  151 (253)
T cd05122          80 SGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILL----TSDGEVKLIDFGLSAQLSDT  151 (253)
T ss_pred             CCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEE----ccCCeEEEeecccccccccc
Confidence            4689999988764568999999999999999999999999999999999999    66788999999998776553

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.36  E-value=8.3e-12  Score=76.30  Aligned_cols=72  Identities=24%  Similarity=0.274  Sum_probs=58.9

Q ss_pred             CCCCCCHHHHHhhccc-ccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            2 ASSGVNFYNHSKKSAK-ILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~-~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      +..++++.+.+..... .+++..+..++.|++.|+.++|+++++|++++++||++.   ..+..++++|||++...
T Consensus        81 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~---~~~~~~kl~dfg~~~~~  153 (294)
T PLN00009         81 EYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLID---RRTNALKLADFGLARAF  153 (294)
T ss_pred             ecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEE---CCCCEEEEccccccccc
Confidence            4456788888765433 267888899999999999999999999999999999994   23457899999998754

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.36  E-value=4.4e-12  Score=77.05  Aligned_cols=72  Identities=21%  Similarity=0.214  Sum_probs=61.1

Q ss_pred             CCCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            2 ASSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +...++|.+++.... ..+++..+..++.+++.++.|+|+.+++|+|++++||++    ..+..++++|||++....
T Consensus        79 e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill----~~~~~~~l~dfg~~~~~~  151 (284)
T cd07860          79 EFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAIKLADFGLARAFG  151 (284)
T ss_pred             eccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----CCCCCEEEeeccchhhcc
Confidence            344567888876542 448999999999999999999999999999999999999    777889999999887543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.36  E-value=3.1e-12  Score=78.49  Aligned_cols=72  Identities=22%  Similarity=0.297  Sum_probs=61.8

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +..++++.+.+......+++..+..++.|++.++.|+|+.+++|+|++++||++    ..+..++++|||++....
T Consensus        95 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~----~~~~~~~l~dfg~~~~~~  166 (311)
T cd07866          95 PYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILI----DNQGILKIADFGLARPYD  166 (311)
T ss_pred             ecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----CCCCCEEECcCccchhcc
Confidence            344567777776544569999999999999999999999999999999999999    778889999999987654

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.36  E-value=7.2e-12  Score=77.47  Aligned_cols=71  Identities=28%  Similarity=0.251  Sum_probs=61.4

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      +...+++.+++......+++..+..++.|++.++.|+|+.+++|+|++++||++    ..+..+++.|||++...
T Consensus       101 e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili----~~~~~~kL~dfg~~~~~  171 (313)
T cd06633         101 EYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL----TEPGQVKLADFGSASKS  171 (313)
T ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEE----CCCCCEEEeecCCCccc
Confidence            444578888887655668999999999999999999999999999999999999    66778999999988643

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.36  E-value=4.3e-12  Score=76.40  Aligned_cols=72  Identities=24%  Similarity=0.313  Sum_probs=61.4

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ..|++|.++++.. +.+++..+..++.|++.|+.++|+++++|+|++++||++.   .....++++|||.+.....
T Consensus        85 ~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~---~~~~~~~l~dfg~~~~~~~  156 (268)
T cd06630          85 MAGGSVSHLLSKY-GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLID---STGQRLRIADFGAAARLAA  156 (268)
T ss_pred             cCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEEccccccccccc
Confidence            3578999998775 4589999999999999999999999999999999999993   2235799999999876553

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.35  E-value=7.8e-12  Score=81.89  Aligned_cols=55  Identities=25%  Similarity=0.338  Sum_probs=49.0

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072           19 LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        19 l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +++..+..++.|++.++.|+|+.+++|+|+|++||++    ..+..++|+|||++....
T Consensus       306 ~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl----~~~~~~kL~DFGla~~~~  360 (507)
T PLN03224        306 RDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLV----TVDGQVKIIDFGAAVDMC  360 (507)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEE----CCCCcEEEEeCcCccccc
Confidence            4567788899999999999999999999999999999    667789999999997543

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.35  E-value=6e-12  Score=75.51  Aligned_cols=72  Identities=28%  Similarity=0.313  Sum_probs=63.9

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~-~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      .|++|.+++... ..+++.....++.|++.++.++|+ .+++|++++++||++    ..+..++++|||.+.......
T Consensus        82 ~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~----~~~~~~~l~df~~~~~~~~~~  154 (264)
T cd06623          82 DGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLI----NSKGEVKIADFGISKVLENTL  154 (264)
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEE----CCCCCEEEccCccceecccCC
Confidence            568999999876 458999999999999999999999 999999999999999    778889999999988765433

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.35  E-value=5.3e-12  Score=76.63  Aligned_cols=70  Identities=23%  Similarity=0.281  Sum_probs=61.4

Q ss_pred             CCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++.... ..+++..+..++.|++.++.++|+.+++|+|++++||++    ..+..+++.|||.+....
T Consensus        76 ~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~----~~~~~~~l~dfg~~~~~~  146 (277)
T cd05577          76 NGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLL----DDHGNVRISDLGLAVELK  146 (277)
T ss_pred             CCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE----CCCCCEEEccCcchhhhc
Confidence            4689999887653 248999999999999999999999999999999999999    677889999999886543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.35  E-value=2.8e-12  Score=84.20  Aligned_cols=89  Identities=16%  Similarity=0.083  Sum_probs=69.5

Q ss_pred             CCCCCCCHHHHHhhccccc-CHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            1 MASSGVNFYNHSKKSAKIL-LEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l-~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      |+|  |||.+++.++..+. .-+....++.|++.|+.|+.+-+++|||+.+.|+++    +.+..+||+|||+++-....
T Consensus       617 mEn--GDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv----~~e~~iKiadfgmsR~lysg  690 (807)
T KOG1094|consen  617 MEN--GDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLV----DGEFTIKIADFGMSRNLYSG  690 (807)
T ss_pred             Hhc--CcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceee----cCcccEEecCcccccccccC
Confidence            566  99999999874442 445556799999999999999999999999999999    88999999999999976665


Q ss_pred             CcceeeccccCccccc
Q 038072           80 GLLNVTGVGEGQVADI   95 (97)
Q Consensus        80 ~~~~~~~~~~~~~~~~   95 (97)
                      +.........-...||
T Consensus       691 ~yy~vqgr~vlpiRwm  706 (807)
T KOG1094|consen  691 DYYRVQGRAVLPIRWM  706 (807)
T ss_pred             Cceeeecceeeeeeeh
Confidence            5544333333334444

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.35  E-value=4.7e-12  Score=87.74  Aligned_cols=75  Identities=25%  Similarity=0.243  Sum_probs=59.8

Q ss_pred             CCCCCHHHHHhhc---ccccCHHHHHHHHHHHHHHHHHHHHc-------CccccCCCCCcEEEeeCC-------------
Q 038072            3 SSGVNFYNHSKKS---AKILLEHEVRRYTRDILRGLDHIHSH-------GVAHCGIKLDNILLVPGK-------------   59 (97)
Q Consensus         3 ~~g~~l~~~l~~~---~~~l~~~~~~~~~~~i~~~l~~~h~~-------~~~~~~l~~~~i~~~~~~-------------   59 (97)
                      +.+++|.+++...   .+.+++..++.++.|++.||.|+|+.       +|+|+||||+||++....             
T Consensus        96 ~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~  175 (1021)
T PTZ00266         96 CDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNL  175 (1021)
T ss_pred             CCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccccccccc
Confidence            3578999988752   24589999999999999999999984       499999999999984310             


Q ss_pred             CCCceEEEeecCceeeec
Q 038072           60 DAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        60 ~~~~~~~i~dfg~a~~~~   77 (97)
                      .....++|+|||++....
T Consensus       176 ng~~iVKLsDFGlAr~l~  193 (1021)
T PTZ00266        176 NGRPIAKIGDFGLSKNIG  193 (1021)
T ss_pred             CCCCceEEccCCcccccc
Confidence            123458999999997654

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.35  E-value=5.1e-12  Score=76.67  Aligned_cols=69  Identities=29%  Similarity=0.275  Sum_probs=60.6

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++..  +.+++..+..++.+++.++.|+|+.+++|+|++++||++    ..+..+++.|||++.....
T Consensus        85 ~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i----~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06642          85 GGGSALDLLKP--GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLL----SEQGDVKLADFGVAGQLTD  153 (277)
T ss_pred             CCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEE----eCCCCEEEccccccccccC
Confidence            46889888865  458999999999999999999999999999999999999    6677899999999876543

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.35  E-value=5.1e-12  Score=78.62  Aligned_cols=72  Identities=21%  Similarity=0.212  Sum_probs=63.0

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      |+...++|.+++... ..+++..+..++.|++.++.++|+.+++|+|++++||++    .....++++|||.+....
T Consensus        99 ~e~~~~~l~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill----~~~~~~kl~dfg~~~~~~  170 (335)
T PTZ00024         99 MDIMASDLKKVVDRK-IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFI----NSKGICKIADFGLARRYG  170 (335)
T ss_pred             EeccccCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEE----CCCCCEEECCccceeecc
Confidence            345567899988764 458999999999999999999999999999999999999    667789999999987655

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.34  E-value=6.1e-12  Score=77.09  Aligned_cols=69  Identities=26%  Similarity=0.301  Sum_probs=60.5

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.+++.+.  .+++..+..++.+++.++.++|+++++|+|++++|+++    ..+..++|+|||++.....
T Consensus        99 ~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili----~~~~~~kL~dfg~~~~~~~  167 (293)
T cd06647          99 AGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL----GMDGSVKLTDFGFCAQITP  167 (293)
T ss_pred             CCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEE----cCCCCEEEccCcceecccc
Confidence            578999998763  47899999999999999999999999999999999999    6677899999998875543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.34  E-value=3.2e-12  Score=76.84  Aligned_cols=70  Identities=21%  Similarity=0.258  Sum_probs=61.9

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~-~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++......+++..+..++.|++.++.++|+ .+++|+|++++||++    +.+..+++.|||.+....
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~----~~~~~~~l~d~g~~~~~~  152 (265)
T cd06605          82 DGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILV----NSRGQIKLCDFGVSGQLV  152 (265)
T ss_pred             CCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEE----CCCCCEEEeecccchhhH
Confidence            4689999998764568999999999999999999999 999999999999999    667889999999886543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.34  E-value=1.3e-11  Score=76.09  Aligned_cols=71  Identities=23%  Similarity=0.169  Sum_probs=61.4

Q ss_pred             CCCCCHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKS-AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~-~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.+++|.+++... ...+++..+..++.|++.|+.|+|+++++|+|++++||++    ..+..+++.|||.+....
T Consensus        81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili----~~~~~~kl~d~~~~~~~~  152 (314)
T cd08216          81 MAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILL----SGDGKVVLSGLRYSVSMI  152 (314)
T ss_pred             cCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEE----ecCCceEEecCccceeec
Confidence            3568899988764 2348999999999999999999999999999999999999    667889999999887554

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.34  E-value=4.8e-12  Score=76.31  Aligned_cols=69  Identities=33%  Similarity=0.378  Sum_probs=61.0

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++... +.+++..+..++.+++.++.++|+++++|+|++++||++    +.+..+++.|||+++...
T Consensus        89 ~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i----~~~~~~~l~dfg~~~~~~  157 (264)
T cd06653          89 PGGSIKDQLKAY-GALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILR----DSAGNVKLGDFGASKRIQ  157 (264)
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE----cCCCCEEECccccccccc
Confidence            478899988765 448999999999999999999999999999999999999    667789999999987543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.34  E-value=1.1e-11  Score=75.32  Aligned_cols=70  Identities=24%  Similarity=0.258  Sum_probs=61.7

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ..|++|.+++..  +.+++..+..++.+++.++.++|+.+++|+|++++||++    ..+..++++|||++.....
T Consensus        84 ~~~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~----~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06640          84 LGGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLL----SEQGDVKLADFGVAGQLTD  153 (277)
T ss_pred             CCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEE----cCCCCEEEcccccceeccC
Confidence            357899998875  458999999999999999999999999999999999999    6677899999999976544

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.34  E-value=8.3e-12  Score=74.80  Aligned_cols=72  Identities=21%  Similarity=0.289  Sum_probs=62.2

Q ss_pred             CCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+.+.... ..+++..+..++.|++.++.++|+++++|+|++++|+++    ..+..+++.|||++.....
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~----~~~~~~~l~d~~~~~~~~~  153 (256)
T cd08218          81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL----TKDGTIKLGDFGIARVLNS  153 (256)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE----cCCCCEEEeeccceeecCc
Confidence            34789999887643 347899999999999999999999999999999999999    6677899999999976544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.34  E-value=8.4e-12  Score=74.36  Aligned_cols=72  Identities=36%  Similarity=0.416  Sum_probs=64.1

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      .+++|.+++.... .+++..+..++.+++.++.++|+.+++|+|++++||++    ..+..++|+|||.+.......
T Consensus        84 ~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i----~~~~~~~l~d~~~~~~~~~~~  155 (260)
T cd06606          84 SGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILV----DSDGVVKLADFGCAKRLGDIE  155 (260)
T ss_pred             CCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE----cCCCCEEEcccccEEeccccc
Confidence            3789999988764 69999999999999999999999999999999999999    667889999999988766543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.33  E-value=1e-11  Score=77.15  Aligned_cols=68  Identities=16%  Similarity=0.130  Sum_probs=58.2

Q ss_pred             CCCCCHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCcee
Q 038072            3 SSGVNFYNHSKKS-AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKC   74 (97)
Q Consensus         3 ~~g~~l~~~l~~~-~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~   74 (97)
                      +.+++|.+++... ...+++..+..++.|++.|+.|+|+++++|+|++++||++    ..+..+++.||+.+.
T Consensus        81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~----~~~~~~~l~~~~~~~  149 (327)
T cd08227          81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI----SVDGKVYLSGLRSNL  149 (327)
T ss_pred             cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEE----ecCCcEEEcccchhh
Confidence            3478999998764 2348999999999999999999999999999999999999    666788899987644

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.33  E-value=7.6e-12  Score=75.36  Aligned_cols=69  Identities=25%  Similarity=0.283  Sum_probs=61.5

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      +.|++|.+++.+. +.+++..+..++.|++.++.++|+.+++|+|++++|+++    .....++++|||++...
T Consensus        84 ~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~----~~~~~~~l~dfg~~~~~  152 (265)
T cd06631          84 VPGGSISSILNRF-GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVML----MPNGIIKLIDFGCARRL  152 (265)
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEE----CCCCeEEeccchhhHhh
Confidence            3578999999775 458999999999999999999999999999999999999    67788999999988654

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.33  E-value=1.1e-11  Score=74.41  Aligned_cols=70  Identities=36%  Similarity=0.466  Sum_probs=62.1

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.+++... ..+++..+..++.+++.++.++|+.+++|+|++++||++    .....++++|||++.....
T Consensus        82 ~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~----~~~~~~kl~d~g~~~~~~~  151 (264)
T cd06626          82 SGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFL----DHNGVIKLGDFGCAVKLKN  151 (264)
T ss_pred             CCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCCEEEcccccccccCC
Confidence            578999998875 448899999999999999999999999999999999999    6678899999999876543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.33  E-value=4.7e-12  Score=85.83  Aligned_cols=88  Identities=11%  Similarity=0.102  Sum_probs=72.6

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcce
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLN   83 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~~   83 (97)
                      .+|.|.++++.++..+-.+....|..||+.|+.|+|.+.++|||+-..|+++    ..-..+||.|||+++........-
T Consensus       780 P~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLV----ksP~hvkitdfgla~ll~~d~~ey  855 (1177)
T KOG1025|consen  780 PLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLV----KSPNHVKITDFGLAKLLAPDEKEY  855 (1177)
T ss_pred             ccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheee----cCCCeEEEEecchhhccCcccccc
Confidence            3699999999988889999999999999999999999999999999999999    777889999999999877654443


Q ss_pred             eeccccCccccc
Q 038072           84 VTGVGEGQVADI   95 (97)
Q Consensus        84 ~~~~~~~~~~~~   95 (97)
                      .+..|--...||
T Consensus       856 ~~~~gK~pikwm  867 (1177)
T KOG1025|consen  856 SAPGGKVPIKWM  867 (1177)
T ss_pred             cccccccCcHHH
Confidence            333333333343

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.32  E-value=9e-12  Score=74.86  Aligned_cols=72  Identities=31%  Similarity=0.327  Sum_probs=62.1

Q ss_pred             CCCCCHHHHHhhc--ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKS--AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~--~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++...  ...+++..+..++.|++.++.++|+.+++|+|++++|+++    .++..+++.|||++.....
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~----~~~~~~~l~df~~~~~~~~  154 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILL----GEDGSVKIADFGVSASLAD  154 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE----cCCCCEEEcccchHHHhcc
Confidence            3578999998764  1348999999999999999999999999999999999999    6677899999998865554

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.32  E-value=1e-11  Score=77.66  Aligned_cols=71  Identities=25%  Similarity=0.315  Sum_probs=59.6

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +..+++|.+++..  +.+++..+..++.|++.|+.|+|+.+++|+|++++|+++.   ..+..+++.|||.+....
T Consensus        96 e~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~---~~~~~~kl~dfg~~~~~~  166 (342)
T cd07854          96 EYMETDLANVLEQ--GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFIN---TEDLVLKIGDFGLARIVD  166 (342)
T ss_pred             ecccccHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEc---CCCceEEECCcccceecC
Confidence            4455688887765  3589999999999999999999999999999999999993   245678999999997653

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.32  E-value=1.4e-11  Score=74.86  Aligned_cols=71  Identities=23%  Similarity=0.240  Sum_probs=61.4

Q ss_pred             CCCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            2 ASSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      +..+++|.+++.... ..+++..+..++.|++.++.++|+.+++|+|++++|+++    ..+..++++|||.+...
T Consensus        78 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~----~~~~~~~l~df~~~~~~  149 (283)
T cd07835          78 EFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLI----DREGALKLADFGLARAF  149 (283)
T ss_pred             eccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE----cCCCcEEEeeccccccc
Confidence            344578888887653 348999999999999999999999999999999999999    66788999999998654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.31  E-value=1.3e-11  Score=77.31  Aligned_cols=79  Identities=18%  Similarity=0.311  Sum_probs=64.5

Q ss_pred             CCCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCC----------------CCCce
Q 038072            2 ASSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGK----------------DAGFM   64 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~----------------~~~~~   64 (97)
                      +..|.++++++++++ .+++-++++.+.+|++.++.++|+.+++|.|+||+||++...+                ..+..
T Consensus       171 ellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~  250 (415)
T KOG0671|consen  171 ELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTA  250 (415)
T ss_pred             eccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcc
Confidence            456778999998863 4489999999999999999999999999999999999975321                12456


Q ss_pred             EEEeecCceeeeccCC
Q 038072           65 AKIVARGDKCLHERHG   80 (97)
Q Consensus        65 ~~i~dfg~a~~~~~~~   80 (97)
                      ++++|||.|..-...+
T Consensus       251 I~vIDFGsAtf~~e~h  266 (415)
T KOG0671|consen  251 IKVIDFGSATFDHEHH  266 (415)
T ss_pred             eEEEecCCcceeccCc
Confidence            8999999998655443

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.31  E-value=1.2e-11  Score=82.64  Aligned_cols=77  Identities=16%  Similarity=0.213  Sum_probs=66.7

Q ss_pred             CCCCCHHHHHhhcc---------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEE
Q 038072            3 SSGVNFYNHSKKSA---------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKI   67 (97)
Q Consensus         3 ~~g~~l~~~l~~~~---------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i   67 (97)
                      +..|+|.++++.++               ..++...+..+..|++.|+.|+.+..++|||+-..||++    ..+..+||
T Consensus       384 ~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi----~~~~~~kI  459 (609)
T KOG0200|consen  384 AEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLI----TKNKVIKI  459 (609)
T ss_pred             ccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEe----cCCCEEEE
Confidence            45689999998865               238889999999999999999999999999999999999    77889999


Q ss_pred             eecCceeeeccCCcce
Q 038072           68 VARGDKCLHERHGLLN   83 (97)
Q Consensus        68 ~dfg~a~~~~~~~~~~   83 (97)
                      +|||+|+.........
T Consensus       460 aDFGlar~~~~~~~y~  475 (609)
T KOG0200|consen  460 ADFGLARDHYNKDYYR  475 (609)
T ss_pred             ccccceeccCCCCceE
Confidence            9999999766655444

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.31  E-value=1.7e-11  Score=74.48  Aligned_cols=69  Identities=30%  Similarity=0.357  Sum_probs=58.5

Q ss_pred             CCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            5 GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         5 g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ++.+.++.... ..+++..+..++.|++.++.|+|+.+++|+|++++|+++    +.+..++++|||++.....
T Consensus        84 ~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~----~~~~~~~l~dfg~~~~~~~  152 (286)
T cd07846          84 HTVLDDLEKYP-NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILV----SQSGVVKLCDFGFARTLAA  152 (286)
T ss_pred             ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE----CCCCcEEEEeeeeeeeccC
Confidence            45565555443 348999999999999999999999999999999999999    7788899999999876543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.31  E-value=4.6e-12  Score=83.97  Aligned_cols=87  Identities=16%  Similarity=0.129  Sum_probs=73.5

Q ss_pred             CCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCccee
Q 038072            5 GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLNV   84 (97)
Q Consensus         5 g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~~~   84 (97)
                      -|.|..+++.++..++-.....++.|++.++.|+|+.+.+|||+...||++    .....+|++|||+++...-...+..
T Consensus       474 ~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLV----sSp~CVKLaDFGLSR~~ed~~yYka  549 (974)
T KOG4257|consen  474 LGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILV----SSPQCVKLADFGLSRYLEDDAYYKA  549 (974)
T ss_pred             chhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheee----cCcceeeecccchhhhccccchhhc
Confidence            478999999988889999999999999999999999999999999999999    7788999999999998876554443


Q ss_pred             eccccCcccccc
Q 038072           85 TGVGEGQVADIS   96 (97)
Q Consensus        85 ~~~~~~~~~~~~   96 (97)
                      + .|.-...|||
T Consensus       550 S-~~kLPIKWma  560 (974)
T KOG4257|consen  550 S-RGKLPIKWMA  560 (974)
T ss_pred             c-ccccceeecC
Confidence            2 4444455554

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.30  E-value=1.3e-11  Score=75.16  Aligned_cols=70  Identities=27%  Similarity=0.330  Sum_probs=62.1

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++......+++..+..++.+++.++.++|+.+++|++++++||++    ..+..++|+|||++....
T Consensus        98 ~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i----~~~~~~~l~d~~~~~~~~  167 (286)
T cd06614          98 DGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILL----SKDGSVKLADFGFAAQLT  167 (286)
T ss_pred             CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEE----cCCCCEEECccchhhhhc
Confidence            4689999998864369999999999999999999999999999999999999    667789999999876543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.30  E-value=6.9e-12  Score=82.34  Aligned_cols=70  Identities=21%  Similarity=0.295  Sum_probs=54.5

Q ss_pred             CCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            5 GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         5 g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      |+-+.+.+... . ....++..|+.+++.++.|+|+++++|||++|+||++.   .....++|+|||.++...+.
T Consensus       400 g~ell~ri~~~-~-~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~---~~~g~lrltyFG~a~~~~~~  469 (612)
T KOG0603|consen  400 GGELLRRIRSK-P-EFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD---GSAGHLRLTYFGFWSELERS  469 (612)
T ss_pred             ccHHHHHHHhc-c-hhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec---CCCCcEEEEEechhhhCchh
Confidence            34444444432 2 22367778999999999999999999999999999993   24567999999999877765

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.30  E-value=1.8e-11  Score=75.12  Aligned_cols=68  Identities=24%  Similarity=0.267  Sum_probs=59.4

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+++|.+++..  +.+++..+..++.|++.++.++|+.+++|+|++++||++    +.+..+++.|||++....
T Consensus       100 ~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv----~~~~~~~l~dfg~~~~~~  167 (292)
T cd06657         100 EGGALTDIVTH--TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILL----THDGRVKLSDFGFCAQVS  167 (292)
T ss_pred             CCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----CCCCCEEEcccccceecc
Confidence            46788887754  348999999999999999999999999999999999999    667789999999887554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.29  E-value=2.2e-11  Score=73.96  Aligned_cols=69  Identities=28%  Similarity=0.283  Sum_probs=60.7

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.+++..  ..+++..+..++.+++.++.++|+.+++|+|+++.|+++    ..+..+++.|||++.....
T Consensus        85 ~~~~l~~~i~~--~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i----~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06641          85 GGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL----SEHGEVKLADFGVAGQLTD  153 (277)
T ss_pred             CCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEE----CCCCCEEEeecccceeccc
Confidence            46789888865  458999999999999999999999999999999999999    6677899999999876543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.28  E-value=1.6e-11  Score=74.85  Aligned_cols=57  Identities=19%  Similarity=0.225  Sum_probs=51.0

Q ss_pred             cccCHHHHHHHHHHHHHHHHHHHHc-CccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072           17 KILLEHEVRRYTRDILRGLDHIHSH-GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        17 ~~l~~~~~~~~~~~i~~~l~~~h~~-~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      ..+++..+..++.+++.++.|+|+. +++|+|++++||++    .....++++|||++....
T Consensus       102 ~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~----~~~~~~kl~dfg~~~~~~  159 (288)
T cd06616         102 SVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILL----DRNGNIKLCDFGISGQLV  159 (288)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEE----ccCCcEEEeecchhHHhc
Confidence            4589999999999999999999974 99999999999999    667789999999986543

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.28  E-value=3.8e-11  Score=71.75  Aligned_cols=71  Identities=28%  Similarity=0.338  Sum_probs=61.0

Q ss_pred             CCCCHHHHHhhc---ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKS---AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~---~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++...   +..+++..+..++.+++.++.++|+.+++|+|+++.||++    ..+..+++.|||++.....
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~----~~~~~~kl~d~g~~~~~~~  155 (256)
T cd08530          82 PFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILL----VANDLVKIGDLGISKVLKK  155 (256)
T ss_pred             CCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE----ecCCcEEEeeccchhhhcc
Confidence            478899887652   2348999999999999999999999999999999999999    5677899999998876544

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.28  E-value=2.9e-11  Score=72.37  Aligned_cols=72  Identities=24%  Similarity=0.344  Sum_probs=60.7

Q ss_pred             CCCCHHHHHhhccc-ccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCC-ceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKKSAK-ILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAG-FMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~~~~-~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~-~~~~i~dfg~a~~~~~~   79 (97)
                      .+++|.+++..... .+++..+..++.+++.++.++|+.+++|+|++++||++    +.+ ..++++|||.+......
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~----~~~~~~~~l~d~~~~~~~~~~  155 (257)
T cd08225          82 DGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFL----SKNGMVAKLGDFGIARQLNDS  155 (257)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEE----cCCCCeEEecccccchhccCC
Confidence            47899998876433 47999999999999999999999999999999999999    444 46799999998766543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.28  E-value=4.5e-11  Score=71.82  Aligned_cols=70  Identities=24%  Similarity=0.309  Sum_probs=59.0

Q ss_pred             CCCCHHHHHhh---cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKK---SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~---~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.+++.+   ....+++..+..++.|++.++.++|+.+++|++++++|+++    .. ..++++|||++.....
T Consensus        85 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili----~~-~~~~l~d~g~~~~~~~  157 (260)
T cd08222          85 EGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFL----KN-NLLKIGDFGVSRLLMG  157 (260)
T ss_pred             CCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEe----ec-CCEeecccCceeecCC
Confidence            56788888764   22448999999999999999999999999999999999999    32 4589999999876544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.28  E-value=1.2e-11  Score=73.69  Aligned_cols=62  Identities=23%  Similarity=0.341  Sum_probs=54.6

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcce
Q 038072           19 LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLN   83 (97)
Q Consensus        19 l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~~   83 (97)
                      ++.-.++.++.+++.|+.|||++|++|||+||.|+++.   ....++++.|+|+|-.+-+.....
T Consensus       129 l~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmId---h~~rkLrlIDWGLAEFYHp~~eYn  190 (338)
T KOG0668|consen  129 LTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMID---HELRKLRLIDWGLAEFYHPGKEYN  190 (338)
T ss_pred             hchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeec---hhhceeeeeecchHhhcCCCceee
Confidence            67788899999999999999999999999999999995   346779999999998877766554

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.27  E-value=3e-11  Score=73.48  Aligned_cols=55  Identities=22%  Similarity=0.286  Sum_probs=50.6

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072           19 LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        19 l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +++..+..++.|++.++.|+|+.+++|+|++++|+++    ..+..++++|||++....
T Consensus        92 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill----~~~~~~~l~dfg~~~~~~  146 (279)
T cd06619          92 IPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLV----NTRGQVKLCDFGVSTQLV  146 (279)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEE----CCCCCEEEeeCCcceecc
Confidence            7888999999999999999999999999999999999    677889999999987544

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.27  E-value=7.5e-12  Score=83.23  Aligned_cols=70  Identities=11%  Similarity=0.146  Sum_probs=62.3

Q ss_pred             CCHHHHHhhcccc-cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            6 VNFYNHSKKSAKI-LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         6 ~~l~~~l~~~~~~-l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      |+|.++|++.... ++.-.+..++.||.+++.|+..+++||||+...|.++    .+++.+||+|||+++.+...
T Consensus       348 GNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLV----gEnhiVKvADFGLsRlMtgD  418 (1157)
T KOG4278|consen  348 GNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV----GENHIVKVADFGLSRLMTGD  418 (1157)
T ss_pred             ccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccc----cccceEEeeccchhhhhcCC
Confidence            8999999986443 6777778889999999999999999999999999999    88999999999999876643

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.27  E-value=1.7e-11  Score=77.49  Aligned_cols=52  Identities=23%  Similarity=0.352  Sum_probs=45.2

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCC-CCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072           25 RRYTRDILRGLDHIHSHGVAHCGI-KLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus        25 ~~~~~~i~~~l~~~h~~~~~~~~l-~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      ..++.+++.++.++|+++++|+|+ ||+||++    +.+..++|+|||+|+......
T Consensus       114 ~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv----~~~~~ikLiDFGlA~~~~~~~  166 (365)
T PRK09188        114 PAWFRSAHRALRDLHRAGITHNDLAKPQNWLM----GPDGEAAVIDFQLASVFRRRG  166 (365)
T ss_pred             HHHHHHHHHHHHHHHHCCCeeCCCCCcceEEE----cCCCCEEEEECccceecccCc
Confidence            457789999999999999999999 9999999    556679999999999766543

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.26  E-value=2.1e-11  Score=75.98  Aligned_cols=69  Identities=28%  Similarity=0.371  Sum_probs=60.0

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      +..+++|.++++.  ..+++..+..++.|++.++.++|+.+++|+++++.|+++    .....++++|||.+...
T Consensus        90 e~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili----~~~~~~~l~dfg~~~~~  158 (328)
T cd07856          90 ELLGTDLHRLLTS--RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILI----NENCDLKICDFGLARIQ  158 (328)
T ss_pred             ehhccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeE----CCCCCEEeCcccccccc
Confidence            4557788888865  347888899999999999999999999999999999999    66788999999988754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.26  E-value=4.1e-11  Score=72.30  Aligned_cols=72  Identities=15%  Similarity=0.198  Sum_probs=61.0

Q ss_pred             CCCCHHHHHhh---cccccCHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKK---SAKILLEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~---~~~~l~~~~~~~~~~~i~~~l~~~h~-~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .|++|.+++..   ....+++..+..++.+++.++.++|+ .+++|+|+++.||++    .....+++.|||.+......
T Consensus        92 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~----~~~~~~~l~dfg~~~~~~~~  167 (269)
T cd08528          92 EGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIML----GEDDKVTITDFGLAKQKQPE  167 (269)
T ss_pred             CCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEE----CCCCcEEEecccceeecccc
Confidence            57788888753   23458999999999999999999996 689999999999999    77788999999999875543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.24  E-value=3.2e-11  Score=75.00  Aligned_cols=67  Identities=19%  Similarity=0.176  Sum_probs=57.4

Q ss_pred             CCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCcee
Q 038072            4 SGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKC   74 (97)
Q Consensus         4 ~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~   74 (97)
                      .++++.+++.... ..+++..+..++.|++.++.|+|+.+++|+|+|++||++    .....+++.||+.+.
T Consensus        82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill----~~~~~~~~~~~~~~~  149 (328)
T cd08226          82 AYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILI----SGDGLVSLSGLSHLY  149 (328)
T ss_pred             cCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----eCCCcEEEechHHHh
Confidence            4678999887642 348999999999999999999999999999999999999    666788999987543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.23  E-value=5.6e-11  Score=71.22  Aligned_cols=68  Identities=22%  Similarity=0.275  Sum_probs=58.9

Q ss_pred             CCCHHHHHhhc--cc-ccCHHHHHHHHHHHHHHHHHHHHcC--ccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            5 GVNFYNHSKKS--AK-ILLEHEVRRYTRDILRGLDHIHSHG--VAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         5 g~~l~~~l~~~--~~-~l~~~~~~~~~~~i~~~l~~~h~~~--~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      -|+|.+.+...  ++ .+++.++..++.+++.|+.++|...  ..|+|+||.||++    .+...+.+.|||.+...
T Consensus       107 ~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILl----s~~~~~vl~D~GS~~~a  179 (302)
T KOG2345|consen  107 RGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILL----SDSGLPVLMDLGSATQA  179 (302)
T ss_pred             cccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEe----cCCCceEEEeccCcccc
Confidence            47888887653  23 4899999999999999999999987  9999999999999    67889999999988653

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.23  E-value=6.1e-11  Score=72.25  Aligned_cols=68  Identities=19%  Similarity=0.161  Sum_probs=59.8

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~-~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      .+++|.+++.+. +.+++..+..++.+++.++.|+|+ ++++|+|++++|+++    .....++++|||++...
T Consensus        86 ~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~----~~~~~~~l~d~gl~~~~  154 (284)
T cd06620          86 DCGSLDRIYKKG-GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILV----NSRGQIKLCDFGVSGEL  154 (284)
T ss_pred             CCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEE----CCCCcEEEccCCcccch
Confidence            478898888775 458999999999999999999996 689999999999999    66788999999988654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.23  E-value=2.9e-11  Score=81.42  Aligned_cols=75  Identities=15%  Similarity=0.142  Sum_probs=64.5

Q ss_pred             CCCHHHHHhhc-------------ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecC
Q 038072            5 GVNFYNHSKKS-------------AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARG   71 (97)
Q Consensus         5 g~~l~~~l~~~-------------~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg   71 (97)
                      -|||.++|+..             +..++..+...++.||+.|+.|+.++.++|||+-+.|.++    .++..+||+|||
T Consensus       573 ~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV----ge~l~VKIsDfG  648 (774)
T KOG1026|consen  573 HGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV----GENLVVKISDFG  648 (774)
T ss_pred             cccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee----ccceEEEecccc
Confidence            38999988642             1227788999999999999999999999999999999999    889999999999


Q ss_pred             ceeeeccCCcce
Q 038072           72 DKCLHERHGLLN   83 (97)
Q Consensus        72 ~a~~~~~~~~~~   83 (97)
                      +++.....+.+.
T Consensus       649 LsRdiYssDYYk  660 (774)
T KOG1026|consen  649 LSRDIYSSDYYK  660 (774)
T ss_pred             cchhhhhhhhhc
Confidence            999877666554

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.23  E-value=4.2e-11  Score=74.90  Aligned_cols=64  Identities=25%  Similarity=0.290  Sum_probs=54.7

Q ss_pred             CCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            6 VNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         6 ~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      .++.++..   ..+++..+..++.|++.|+.++|+.+++|+|++++||++    ..+..++++|||+++..
T Consensus       104 ~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll----~~~~~~kL~dfg~~~~~  167 (342)
T cd07879         104 TDLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAV----NEDCELKILDFGLARHA  167 (342)
T ss_pred             cCHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCCEEEeeCCCCcCC
Confidence            34444432   348999999999999999999999999999999999999    67788999999998754

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.22  E-value=3.5e-11  Score=81.26  Aligned_cols=93  Identities=20%  Similarity=0.143  Sum_probs=65.9

Q ss_pred             CCCCHHHHHhhccccc---CHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCC-CCCceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKKSAKIL---LEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGK-DAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l---~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~-~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.-+|.+++......+   ..-.....+.|++.|+.++|+-+++|||+||.||++.-.+ .....++|+|||++++....
T Consensus       585 C~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~  664 (903)
T KOG1027|consen  585 CACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGG  664 (903)
T ss_pred             hhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCC
Confidence            4467888887631111   1134567789999999999999999999999999995422 23477899999999987654


Q ss_pred             Ccce-eeccccCcccccc
Q 038072           80 GLLN-VTGVGEGQVADIS   96 (97)
Q Consensus        80 ~~~~-~~~~~~~~~~~~~   96 (97)
                      .... ....++|+..|++
T Consensus       665 ~sS~~r~s~~sGt~GW~A  682 (903)
T KOG1027|consen  665 KSSFSRLSGGSGTSGWQA  682 (903)
T ss_pred             cchhhcccCCCCcccccC
Confidence            3332 3455677776664

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.22  E-value=8.7e-11  Score=71.71  Aligned_cols=70  Identities=26%  Similarity=0.264  Sum_probs=59.7

Q ss_pred             CCCCHHHHHhh---cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKK---SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~---~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++..   ....+++..+..++.+++.++.|+|+.+++|+|+++.|+++    .....++++|||++....
T Consensus        84 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~----~~~~~~~l~dfg~~~~~~  156 (287)
T cd06621          84 EGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILL----TRKGQVKLCDFGVSGELV  156 (287)
T ss_pred             CCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----ecCCeEEEeecccccccc
Confidence            47889887653   23448899999999999999999999999999999999999    667789999999986543

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.21  E-value=1.8e-10  Score=65.80  Aligned_cols=61  Identities=25%  Similarity=0.297  Sum_probs=53.2

Q ss_pred             CCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            6 VNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         6 ~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+|.+++...+..+++..+..++.|++.|+.|+|+++      |++||++    ..+..+++  ||++.....
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~----~~~~~~~~--fG~~~~~~~   61 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILL----TWDGLLKL--DGSVAFKTP   61 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeE----cCccceee--ccceEeecc
Confidence            6899999876566999999999999999999999988      9999999    66777777  999887654

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.20  E-value=8e-11  Score=78.60  Aligned_cols=76  Identities=24%  Similarity=0.356  Sum_probs=63.8

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      |+..-.||+.++... +.+...++..++.|++.|++|+|+.++.|||+|++|+++    .....+||.|||.+..+....
T Consensus       400 mE~~~~Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~----~~~g~lki~Dfg~~~vf~~~~  474 (601)
T KOG0590|consen  400 MEYCPYDLFSLVMSN-GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLV----TENGILKIIDFGAASVFRYPW  474 (601)
T ss_pred             hhcccHHHHHHHhcc-cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEE----ecCCceEEeecCcceeeccCc
Confidence            344334888888875 458899999999999999999999999999999999999    667799999999987766444


Q ss_pred             c
Q 038072           81 L   81 (97)
Q Consensus        81 ~   81 (97)
                      .
T Consensus       475 e  475 (601)
T KOG0590|consen  475 E  475 (601)
T ss_pred             c
Confidence            3

>smart00090 RIO RIO-like kinase

Probab=99.19  E-value=2.7e-11  Score=72.78  Aligned_cols=56  Identities=20%  Similarity=0.181  Sum_probs=48.6

Q ss_pred             ccCHHHHHHHHHHHHHHHHHHHHcC-ccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           18 ILLEHEVRRYTRDILRGLDHIHSHG-VAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        18 ~l~~~~~~~~~~~i~~~l~~~h~~~-~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+....+..++.|++.++.++|+++ ++|+|++|+||++    . ...+++.|||.+.....
T Consensus       144 ~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli----~-~~~i~LiDFg~a~~~~~  200 (237)
T smart00090      144 EPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILV----H-DGKVVIIDVSQSVELDH  200 (237)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEE----E-CCCEEEEEChhhhccCC
Confidence            3566677889999999999999999 9999999999999    4 56799999999886554

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.19  E-value=9.2e-11  Score=69.23  Aligned_cols=49  Identities=24%  Similarity=0.243  Sum_probs=42.8

Q ss_pred             HHHHHHHHHHHHHHHcCccccCC-CCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           26 RYTRDILRGLDHIHSHGVAHCGI-KLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        26 ~~~~~i~~~l~~~h~~~~~~~~l-~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .++.|++.++.++|+++++|+|+ +++||++    +.+..++|+|||+|.....
T Consensus        95 ~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv----~~~g~i~LIDFG~A~~~~~  144 (218)
T PRK12274         95 AYFRAARRLLQQLHRCGVAHNDLAKEANWLV----QEDGSPAVIDFQLAVRGNP  144 (218)
T ss_pred             HHHHHHHHHHHHHHHCcCccCCCCCcceEEE----cCCCCEEEEECCCceecCC
Confidence            46778899999999999999999 7899999    5567899999999986554

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.18  E-value=2.8e-10  Score=65.56  Aligned_cols=72  Identities=32%  Similarity=0.406  Sum_probs=62.5

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCC-CceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDA-GFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~-~~~~~i~dfg~a~~~~~~   79 (97)
                      .|++|.+++......+++..+..++.+++.++.++|+.+++|+|+++.||++    .. ...+++.|||.+......
T Consensus        74 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~----~~~~~~~~l~d~~~~~~~~~~  146 (215)
T cd00180          74 EGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILL----DSDNGKVKLADFGLSKLLTSD  146 (215)
T ss_pred             CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEE----eCCCCcEEEecCCceEEccCC
Confidence            3589999988753358999999999999999999999999999999999999    55 678999999999876553

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.17  E-value=2.3e-10  Score=68.83  Aligned_cols=62  Identities=21%  Similarity=0.199  Sum_probs=50.3

Q ss_pred             CCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            6 VNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         6 ~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+|.+++..  ..+++..    +.+++.++.++|+.+++|+|++|.||++    ..+..++++|||.+....
T Consensus       132 ~~L~~~l~~--~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv----~~~~~v~LIDfg~~~~~~  193 (239)
T PRK01723        132 RDLVALLQE--APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILL----DPDGKFWLIDFDRGELRT  193 (239)
T ss_pred             CCHHHHHhc--CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEE----cCCCCEEEEECCCcccCC
Confidence            588888765  3355543    5678899999999999999999999999    545689999999988754

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.16  E-value=2.7e-10  Score=72.82  Aligned_cols=70  Identities=21%  Similarity=0.317  Sum_probs=62.1

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc--------CccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSH--------GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~--------~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      +.|+|+++|..  ..++-+....++..++.|+.|+|-.        .+.|||+|..||++    ..+..+-|+|+|+|..
T Consensus       292 e~GSL~DyL~r--~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILV----Kkn~~C~IADLGLAv~  365 (513)
T KOG2052|consen  292 EHGSLYDYLNR--NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV----KKNGTCCIADLGLAVR  365 (513)
T ss_pred             cCCcHHHHHhh--ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEE----ccCCcEEEeeceeeEE
Confidence            35999999998  4489999999999999999999953        48999999999999    7789999999999988


Q ss_pred             eccC
Q 038072           76 HERH   79 (97)
Q Consensus        76 ~~~~   79 (97)
                      +...
T Consensus       366 h~~~  369 (513)
T KOG2052|consen  366 HDSD  369 (513)
T ss_pred             eccc
Confidence            7754

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.16  E-value=3.1e-10  Score=66.87  Aligned_cols=70  Identities=34%  Similarity=0.492  Sum_probs=61.6

Q ss_pred             CCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            5 GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         5 g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +++|.+++..... +++..+..++.+++.++.++|+.+++|+++++.|+++    ..+..+++.|||.+......
T Consensus        71 ~~~L~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~----~~~~~~~l~d~~~~~~~~~~  140 (244)
T smart00220       71 GGDLFDLLKKRGR-LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILL----DEDGHVKLADFGLARQLDPG  140 (244)
T ss_pred             CCCHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEE----CCCCcEEEccccceeeeccc
Confidence            4589998887533 8999999999999999999999999999999999999    66788999999999876653

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.12  E-value=3.6e-10  Score=72.04  Aligned_cols=70  Identities=24%  Similarity=0.201  Sum_probs=56.7

Q ss_pred             CCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            6 VNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         6 ~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+|..++..+  ..+......++.|++.++.|+|+++|.|||+|.+||++.-.++.-..+.++|||+|---.
T Consensus       327 ~tLr~yl~~~--~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~  396 (598)
T KOG4158|consen  327 QTLREYLWTR--HRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADD  396 (598)
T ss_pred             hhHHHHHhcC--CCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeecc
Confidence            4566676663  367778888999999999999999999999999999986554556778899999885433

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.12  E-value=1.5e-10  Score=77.80  Aligned_cols=71  Identities=20%  Similarity=0.223  Sum_probs=62.2

Q ss_pred             CCCCHHHHHhh-cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKK-SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~-~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ..|+|.+.|.+ .+..|.-..+..++.|++.|+.|+.++++||||+-..|+++    .....+||+|||+.+-...
T Consensus       193 plGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlll----asprtVKI~DFGLmRaLg~  264 (1039)
T KOG0199|consen  193 PLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLL----ASPRTVKICDFGLMRALGE  264 (1039)
T ss_pred             ccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhee----cccceeeeecccceeccCC
Confidence            46899998887 44558888999999999999999999999999999999999    5678899999999886543

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.12  E-value=1.7e-11  Score=74.20  Aligned_cols=57  Identities=23%  Similarity=0.153  Sum_probs=50.2

Q ss_pred             cccCHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072           17 KILLEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        17 ~~l~~~~~~~~~~~i~~~l~~~h~-~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+++|..+..+...++.|+.|+.+ ..++|||+||+||++    +....+|++|||.+....
T Consensus       162 ~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILl----dr~G~vKLCDFGIcGqLv  219 (361)
T KOG1006|consen  162 SRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILL----DRHGDVKLCDFGICGQLV  219 (361)
T ss_pred             ccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEE----ecCCCEeeecccchHhHH
Confidence            458999999999999999999986 589999999999999    788999999999876443

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.05  E-value=2.1e-09  Score=62.91  Aligned_cols=72  Identities=32%  Similarity=0.467  Sum_probs=62.3

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .+++|.+++......+++..+..++.+++.++.++|..+++|+|+++.|+++    .....++++|||.+......
T Consensus        80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v----~~~~~~~l~d~g~~~~~~~~  151 (225)
T smart00221       80 EGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILL----GMDGLVKLADFGLARFIHRD  151 (225)
T ss_pred             CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCCEEEeeCceeeEecCc
Confidence            4569999988753328899999999999999999999999999999999999    66789999999998876543

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.04  E-value=1.4e-09  Score=63.84  Aligned_cols=64  Identities=20%  Similarity=0.260  Sum_probs=53.6

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++...    .. ....++.+++.++.++|+.+++|+|+++.|+++    . ...+++.|||.+....
T Consensus        82 ~G~~L~~~~~~~----~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~----~-~~~~~liDf~~a~~~~  145 (211)
T PRK14879         82 EGEPLKDLINSN----GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMIL----S-GGKIYLIDFGLAEFSK  145 (211)
T ss_pred             CCcCHHHHHHhc----cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEE----E-CCCEEEEECCcccCCC
Confidence            478888888653    12 777888999999999999999999999999999    4 5678999999987643

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.04  E-value=7.4e-10  Score=72.44  Aligned_cols=74  Identities=26%  Similarity=0.367  Sum_probs=60.9

Q ss_pred             CCCCCCHHHHHhhcccc--cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKKSAKI--LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~--l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +...-+|..++++-+..  |.-..+..++.|+..||.+|...+|+|.|+||+||+++   .....+||||||.|.....
T Consensus       514 E~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVN---E~k~iLKLCDfGSA~~~~e  589 (752)
T KOG0670|consen  514 EPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVN---ESKNILKLCDFGSASFASE  589 (752)
T ss_pred             hhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEec---cCcceeeeccCcccccccc
Confidence            34456777888764322  77889999999999999999999999999999999995   4478899999999876543

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.00  E-value=2.5e-10  Score=76.07  Aligned_cols=84  Identities=24%  Similarity=0.201  Sum_probs=69.5

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      |.||+|.++-.-- +.+++.++....+..+.++.|+|+++-+|||+|=.||++    .+...+|++|||.+..+...-..
T Consensus        94 cgggslQdiy~~T-gplselqiayvcRetl~gl~ylhs~gk~hRdiKGanill----td~gDvklaDfgvsaqitati~K  168 (829)
T KOG0576|consen   94 CGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILL----TDEGDVKLADFGVSAQITATIAK  168 (829)
T ss_pred             cCCCcccceeeec-ccchhHHHHHHHhhhhccchhhhcCCcccccccccceee----cccCceeecccCchhhhhhhhhh
Confidence            4567777765543 669999999999999999999999999999999999999    78899999999998766655555


Q ss_pred             eeeccccCc
Q 038072           83 NVTGVGEGQ   91 (97)
Q Consensus        83 ~~~~~~~~~   91 (97)
                      .+.+.|+|.
T Consensus       169 rksfiGtpy  177 (829)
T KOG0576|consen  169 RKSFIGTPY  177 (829)
T ss_pred             hhcccCCcc
Confidence            556666654

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.98  E-value=5.4e-09  Score=63.35  Aligned_cols=72  Identities=32%  Similarity=0.335  Sum_probs=60.1

Q ss_pred             CCCCCHHHHHhhcc--cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCc-eEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSA--KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGF-MAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~--~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~-~~~i~dfg~a~~~~~   78 (97)
                      ..|+++.+++....  ..+.+.....+..|++.++.++|+.+++|||++++|+++    .... .+++.|||.++....
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~----~~~~~~~~l~dfg~~~~~~~  154 (384)
T COG0515          80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILL----DRDGRVVKLIDFGLAKLLPD  154 (384)
T ss_pred             CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeee----cCCCCeEEEeccCcceecCC
Confidence            35677776666543  158999999999999999999999999999999999999    5555 799999999985554

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.98  E-value=2e-09  Score=74.70  Aligned_cols=72  Identities=22%  Similarity=0.257  Sum_probs=61.1

Q ss_pred             CCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeC---CCCCceEEEeecCceeeec
Q 038072            5 GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPG---KDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         5 g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~---~~~~~~~~i~dfg~a~~~~   77 (97)
                      -|+|.++++.. +.+++..+..+..|++.-+.++|.++|||.|+||+|+++...   +.+...++|+|||.+--+.
T Consensus       778 ~Gtlld~~N~~-~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~  852 (974)
T KOG1166|consen  778 YGTLLDLINTN-KVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMK  852 (974)
T ss_pred             cccHHHhhccC-CCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeee
Confidence            38999999965 559999999999999999999999999999999999998653   2345678999999886433

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.97  E-value=2.3e-09  Score=62.47  Aligned_cols=62  Identities=16%  Similarity=0.228  Sum_probs=50.3

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++... . .      .++.+++.++.++|+.+++|+|+++.|+++    . ...+++.|||++.....
T Consensus        80 ~g~~l~~~~~~~-~-~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~----~-~~~~~liDfg~a~~~~~  141 (199)
T TIGR03724        80 EGKPLKDVIEEG-N-D------ELLREIGRLVGKLHKAGIVHGDLTTSNIIV----R-DDKLYLIDFGLGKYSDE  141 (199)
T ss_pred             CCccHHHHHhhc-H-H------HHHHHHHHHHHHHHHCCeecCCCCcceEEE----E-CCcEEEEECCCCcCCCc
Confidence            467777766542 1 1      678899999999999999999999999999    4 57799999999877543

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.96  E-value=2.5e-09  Score=70.81  Aligned_cols=61  Identities=11%  Similarity=0.168  Sum_probs=49.7

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++.         ....++.+++.++.++|+.+++|+|++|+||++    . +..+++.|||+++....
T Consensus       419 ~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl----~-~~~~~liDFGla~~~~~  479 (535)
T PRK09605        419 GGKDLKDVLE---------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV----R-DDRLYLIDFGLGKYSDL  479 (535)
T ss_pred             CCCcHHHHHH---------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE----E-CCcEEEEeCcccccCCc
Confidence            4667766664         235678899999999999999999999999999    2 45789999999987554

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.96  E-value=3.2e-09  Score=62.04  Aligned_cols=52  Identities=19%  Similarity=0.229  Sum_probs=45.0

Q ss_pred             HHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           23 EVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        23 ~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ....++.+++.++.++|..+++|+|++|.|+++    ..+..+++.|||.+.....
T Consensus       126 ~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill----~~~~~~~liDfg~~~~~~~  177 (198)
T cd05144         126 DPEEVLDEILEEIVKAYKHGIIHGDLSEFNILV----DDDEKIYIIDWPQMVSTDH  177 (198)
T ss_pred             cHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEE----cCCCcEEEEECCccccCCC
Confidence            345677889999999999999999999999999    6678899999999966544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.94  E-value=1.9e-09  Score=69.83  Aligned_cols=55  Identities=33%  Similarity=0.452  Sum_probs=48.4

Q ss_pred             CCCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCcEEEe
Q 038072            2 ASSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILLV   56 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~-~~~~~~~l~~~~i~~~   56 (97)
                      +..|..|..++.... +.++-..++.+++|++.||.|||+ .+++|.|+||+|+++.
T Consensus       166 EvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~  222 (590)
T KOG1290|consen  166 EVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC  222 (590)
T ss_pred             hhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence            567889999998764 339999999999999999999997 5999999999999984

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=98.88  E-value=5.2e-09  Score=66.36  Aligned_cols=56  Identities=30%  Similarity=0.416  Sum_probs=49.1

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072           19 LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        19 l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      ++-..++.+++.++.|+.++|..||+|||+||.|++..+   ....-.+.|||+|...+
T Consensus       129 l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~---~t~rg~LvDFgLA~~~d  184 (418)
T KOG1167|consen  129 LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNR---RTQRGVLVDFGLAQRYD  184 (418)
T ss_pred             CCHHHHHHHHHHHHHHhhhhhccCccccCCCcccccccc---ccCCceEEechhHHHHH
Confidence            678899999999999999999999999999999999853   35667899999998644

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.87  E-value=6.3e-09  Score=60.03  Aligned_cols=52  Identities=17%  Similarity=0.189  Sum_probs=45.9

Q ss_pred             HHHHHHHHHHHHHHHHHHH-cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           22 HEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        22 ~~~~~~~~~i~~~l~~~h~-~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .....++.+++.++.++|. ++++|+|++|+|+++    . +..+++.|||.+.....
T Consensus       114 ~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili----~-~~~~~liDfg~a~~~~~  166 (187)
T cd05119         114 EDPEELYDQILELMRKLYREAGLVHGDLSEYNILV----D-DGKVYIIDVPQAVEIDH  166 (187)
T ss_pred             ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEE----E-CCcEEEEECcccccccC
Confidence            5667888999999999999 999999999999999    5 67899999999976544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=98.75  E-value=4.2e-08  Score=68.63  Aligned_cols=62  Identities=18%  Similarity=0.192  Sum_probs=50.5

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCCCCcEEEeeCCCCCceEEEeecCce
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIH---SHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDK   73 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h---~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a   73 (97)
                      ..||+|.++++.    +++.....++.+++.|+.|+|   +.+++|+|+|++||++    +.+...++. |+..
T Consensus       765 ~~~g~L~~~l~~----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~----~~~~~~~~~-~~~~  829 (968)
T PLN00113        765 IEGKNLSEVLRN----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIII----DGKDEPHLR-LSLP  829 (968)
T ss_pred             CCCCcHHHHHhc----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEE----CCCCceEEE-eccc
Confidence            357999999964    889999999999999999999   6699999999999999    544454543 4443

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.74  E-value=3.3e-08  Score=59.26  Aligned_cols=45  Identities=16%  Similarity=0.251  Sum_probs=38.5

Q ss_pred             HHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072           27 YTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus        27 ~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      ...++..++..+|+.+++|+|++|.|+++    ..+. +++.|||.....
T Consensus       140 ~~~~i~~~l~~lH~~gi~H~Dikp~Nili----~~~g-i~liDfg~~~~~  184 (232)
T PRK10359        140 VKAKIKASIESLHQHGMVSGDPHKGNFIV----SKNG-LRIIDLSGKRCT  184 (232)
T ss_pred             HHHHHHHHHHHHHHcCCccCCCChHHEEE----eCCC-EEEEECCCcccc
Confidence            35588899999999999999999999999    4444 999999987654

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=98.66  E-value=1.1e-07  Score=60.83  Aligned_cols=72  Identities=17%  Similarity=0.198  Sum_probs=59.6

Q ss_pred             CCHHHHHhhc-------ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            6 VNFYNHSKKS-------AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         6 ~~l~~~l~~~-------~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+|.+++...       .+.++-.+...++.|+..|+.|+|+++++|.|+...|.++    ++...+|+.|-.+++-.-+
T Consensus       373 gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvI----dd~LqVkltDsaLSRDLFP  448 (563)
T KOG1024|consen  373 GNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVI----DDQLQVKLTDSALSRDLFP  448 (563)
T ss_pred             chHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhccee----hhheeEEeccchhccccCc
Confidence            6788887722       1226677788889999999999999999999999999999    7889999999998887665


Q ss_pred             CCc
Q 038072           79 HGL   81 (97)
Q Consensus        79 ~~~   81 (97)
                      .+.
T Consensus       449 ~DY  451 (563)
T KOG1024|consen  449 GDY  451 (563)
T ss_pred             ccc
Confidence            443

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.55  E-value=2.5e-07  Score=54.28  Aligned_cols=54  Identities=11%  Similarity=0.129  Sum_probs=44.7

Q ss_pred             cCHHHHHHHHHHHHHHHHHH-HHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072           19 LLEHEVRRYTRDILRGLDHI-HSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        19 l~~~~~~~~~~~i~~~l~~~-h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +++.....+..+++.++..+ |+.+++|.|+++.||++.     ...+.+.|||-+....
T Consensus       121 ~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~-----~~~v~iIDF~qav~~~  175 (197)
T cd05146         121 LNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWH-----DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEE-----CCcEEEEECCCceeCC
Confidence            55566677788999999988 899999999999999993     3568999999886554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.52  E-value=1e-06  Score=54.08  Aligned_cols=69  Identities=9%  Similarity=0.098  Sum_probs=53.8

Q ss_pred             CHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeC---CCCCceEEEeecCceee
Q 038072            7 NFYNHSKKS-AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPG---KDAGFMAKIVARGDKCL   75 (97)
Q Consensus         7 ~l~~~l~~~-~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~---~~~~~~~~i~dfg~a~~   75 (97)
                      +|.+++... ....++.....++.++...+..+|..+++|+|+++.||++...   ..+...+.++||+.+..
T Consensus       122 sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        122 SLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             cHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            677777542 2335667778899999999999999999999999999999531   12356789999998864

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=98.47  E-value=6.1e-08  Score=63.20  Aligned_cols=86  Identities=13%  Similarity=0.087  Sum_probs=63.6

Q ss_pred             CCCCHHHHHhhccc--ccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCc
Q 038072            4 SGVNFYNHSKKSAK--ILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGL   81 (97)
Q Consensus         4 ~g~~l~~~l~~~~~--~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~   81 (97)
                      .-.+|.+|+.....  ..+....+.+..|+..++.|   ++.+|+|+++.||+.    ..+..+||.|||+.........
T Consensus       339 ~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~----~~d~q~kIgDFgl~ts~~~~~~  411 (516)
T KOG1033|consen  339 EKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFF----SDDDQLKIGDFGLVTSQDKDET  411 (516)
T ss_pred             hhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhcccccccc----ccchhhhhhhhhheeecccCCc
Confidence            34678888864322  26777888999999999999   999999999999998    6667899999999877665441


Q ss_pred             c----eeeccccCcccccc
Q 038072           82 L----NVTGVGEGQVADIS   96 (97)
Q Consensus        82 ~----~~~~~~~~~~~~~~   96 (97)
                      .    ..-....++..|||
T Consensus       412 ~~~~~a~~t~~~gt~~Yms  430 (516)
T KOG1033|consen  412 VAPAAASHTQQVGTLLYMS  430 (516)
T ss_pred             ccchhhhhhhcccccccCC
Confidence            1    11123456777775

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.47  E-value=1.5e-06  Score=51.30  Aligned_cols=70  Identities=17%  Similarity=0.276  Sum_probs=56.0

Q ss_pred             CCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            6 VNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         6 ~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+|.+++..... ++......++.++...+.-||..+++|.|+++.||++... .....+.++||+.++...
T Consensus       103 ~~L~~~~~~~~~-~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~-~~~~~~~lIDld~~~~~~  172 (206)
T PF06293_consen  103 QDLRDLLQQWEQ-LDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPD-DGQYRFYLIDLDRMRFRP  172 (206)
T ss_pred             ccHHHHHHhhcc-cchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCC-CCceeEEEEcchhceeCC
Confidence            467777776423 6667778889999999999999999999999999999543 234589999999887654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.44  E-value=2.1e-07  Score=65.66  Aligned_cols=63  Identities=24%  Similarity=0.301  Sum_probs=51.6

Q ss_pred             CCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCce
Q 038072            6 VNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDK   73 (97)
Q Consensus         6 ~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a   73 (97)
                      .+|++.+..+ .-+..-+-+-++.|++.|+..||+.+|+|.|+|.+||++    +..+.+.+.||..-
T Consensus       105 hnLyDRlSTR-PFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILi----TSWNW~~LtDFAsF  167 (1431)
T KOG1240|consen  105 HNLYDRLSTR-PFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILI----TSWNWLYLTDFASF  167 (1431)
T ss_pred             hhhhhhhccc-hHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEE----eeechhhhhccccc
Confidence            3566666653 115566777788999999999999999999999999999    77889999999644

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.39  E-value=1.9e-06  Score=50.17  Aligned_cols=48  Identities=21%  Similarity=0.311  Sum_probs=37.9

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072           25 RRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        25 ~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      ..++..+-.-+.-||+.+++|.|+.++|+++.     +..+.+.|||++..-.
T Consensus        95 ~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~-----~~~i~~IDfGLg~~s~  142 (204)
T COG3642          95 PDLLREVGRLVGKLHKAGIVHGDLTTSNIILS-----GGRIYFIDFGLGEFSD  142 (204)
T ss_pred             hHHHHHHHHHHHHHHhcCeecCCCccceEEEe-----CCcEEEEECCcccccc
Confidence            34455566667889999999999999999983     3348999999997533

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.39  E-value=1.5e-06  Score=47.80  Aligned_cols=54  Identities=19%  Similarity=0.212  Sum_probs=44.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHc---CccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072           22 HEVRRYTRDILRGLDHIHSH---GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus        22 ~~~~~~~~~i~~~l~~~h~~---~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .....+..++..++..+|..   +++|+|+++.|+++    .....+++.||+.+....+.
T Consensus        86 ~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~----~~~~~~~l~Df~~~~~~~~~  142 (155)
T cd05120          86 EEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILV----DDGKILGIIDWEYAGYGPPA  142 (155)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEE----ECCcEEEEEecccccCCChH
Confidence            55567788889999999985   69999999999999    55678999999999765543

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.39  E-value=1.8e-06  Score=50.41  Aligned_cols=70  Identities=13%  Similarity=0.174  Sum_probs=49.6

Q ss_pred             CHHHHHhhcccc-cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            7 NFYNHSKKSAKI-LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         7 ~l~~~l~~~~~~-l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      ++.+++.+.-.. -..+....++..+-..+.-||+..++|.|+.++||++.+. .....+-+.|||+...-.
T Consensus        97 ~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~-~~~~~~~lIdfgls~~s~  167 (229)
T KOG3087|consen   97 TVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSD-GNQITPILIDFGLSSVSR  167 (229)
T ss_pred             HHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecC-CCcCceEEEeecchhccc
Confidence            556655543122 2233336778888888999999999999999999999643 334456889999986543

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.38  E-value=1.5e-07  Score=62.53  Aligned_cols=71  Identities=25%  Similarity=0.309  Sum_probs=60.4

Q ss_pred             CCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            5 GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         5 g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      ||++...+... ..+++..+..+..+++.++.++|+.+++++|+|++||++    .....+++.|||+.+......
T Consensus        81 gg~lft~l~~~-~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enill----d~~Ghi~~tdfglske~v~~~  151 (612)
T KOG0603|consen   81 GGDLFTRLSKE-VMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLL----LLEGHIKLTDFGLSKEAVKEK  151 (612)
T ss_pred             cchhhhccccC-CchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceee----cccCccccCCchhhhHhHhhh
Confidence            55666666554 337888999999999999999999999999999999999    888999999999998766544

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.35  E-value=2.8e-06  Score=55.42  Aligned_cols=68  Identities=13%  Similarity=0.111  Sum_probs=46.7

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHH-HHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILR-GLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~-~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.++........+.   ..+...++. .+..+|..+++|+|++|.||++    ..+..+++.|||++.....
T Consensus       241 ~G~~L~~~~~~~~~~~~~---~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv----~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       241 DGIPLSDIAALDEAGLDR---KALAENLARSFLNQVLRDGFFHADLHPGNIFV----LKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             CCcccccHHHHHhcCCCH---HHHHHHHHHHHHHHHHhCCceeCCCCcccEEE----CCCCcEEEEeCCCeeECCH
Confidence            366666665432111222   223333333 4677899999999999999999    6677899999999987664

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.29  E-value=1.3e-06  Score=54.06  Aligned_cols=72  Identities=19%  Similarity=0.146  Sum_probs=46.6

Q ss_pred             CCCCCHHHHHhh---cccc---cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            3 SSGVNFYNHSKK---SAKI---LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         3 ~~g~~l~~~l~~---~~~~---l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      ...+||.+++..   ....   +....-..+..|++..+.++|+.+++|.|++++|+++    ..+..+.+.||+.....
T Consensus       120 ~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll----~~~G~v~Lg~F~~~~r~  195 (288)
T PF14531_consen  120 RAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLL----DQDGGVFLGDFSSLVRA  195 (288)
T ss_dssp             --SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-----TTS-EEE--GGGEEET
T ss_pred             hhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEE----cCCCCEEEcChHHHeec
Confidence            345666666543   2111   2222234445888999999999999999999999999    78899999999887654


Q ss_pred             cc
Q 038072           77 ER   78 (97)
Q Consensus        77 ~~   78 (97)
                      ..
T Consensus       196 g~  197 (288)
T PF14531_consen  196 GT  197 (288)
T ss_dssp             TE
T ss_pred             Cc
Confidence            43

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.28  E-value=1.6e-07  Score=63.16  Aligned_cols=72  Identities=26%  Similarity=0.317  Sum_probs=60.2

Q ss_pred             CCCCCHHHHH-hhcccccCHHHHHHHHHHHHHHHHHHH-HcCccccCCCCCcEEEeeCCCCCc-eEEEeecCceeeecc
Q 038072            3 SSGVNFYNHS-KKSAKILLEHEVRRYTRDILRGLDHIH-SHGVAHCGIKLDNILLVPGKDAGF-MAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l-~~~~~~l~~~~~~~~~~~i~~~l~~~h-~~~~~~~~l~~~~i~~~~~~~~~~-~~~i~dfg~a~~~~~   78 (97)
                      ..|+++.+.+ .......+...+..++.|+..++.|+| ..++.|++++|+|.++    +... .++++|||+|..+..
T Consensus       103 s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l----~~s~~~l~~~df~~At~~~~  177 (601)
T KOG0590|consen  103 SDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLL----DESGSALKIADFGLATAYRN  177 (601)
T ss_pred             ccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchh----ccCCCcccCCCchhhccccc
Confidence            4577777777 443224788889999999999999999 8999999999999998    5555 899999999988776

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.24  E-value=3.5e-06  Score=47.75  Aligned_cols=49  Identities=18%  Similarity=0.186  Sum_probs=40.3

Q ss_pred             HHHHHHHHHHHHHHHcCc-----cccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072           26 RYTRDILRGLDHIHSHGV-----AHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus        26 ~~~~~i~~~l~~~h~~~~-----~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      ....++..++..+|+.++     +|+|+++.|+++    + ...+++.||+.+....+.
T Consensus        87 ~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~----~-~~~~~liDf~~a~~~~~~  140 (170)
T cd05151          87 ENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLL----D-DGRLWLIDWEYAGMNDPL  140 (170)
T ss_pred             HHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEE----E-CCeEEEEecccccCCChH
Confidence            456788889999999875     999999999999    4 346899999999876543

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.98  E-value=6.3e-06  Score=48.16  Aligned_cols=51  Identities=25%  Similarity=0.403  Sum_probs=36.4

Q ss_pred             HHHHHHHHHHHHHHHH-HHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072           22 HEVRRYTRDILRGLDH-IHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        22 ~~~~~~~~~i~~~l~~-~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .....+..+++..+.. +|+.+++|.|+.+.||++    .++ .+.+.|||-+....
T Consensus       106 ~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv----~~~-~~~iIDf~qav~~~  157 (188)
T PF01163_consen  106 EEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILV----DDG-KVYIIDFGQAVDSS  157 (188)
T ss_dssp             STHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEE----ETT-CEEE--GTTEEETT
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEe----ecc-eEEEEecCcceecC
Confidence            3455666677764444 579999999999999999    444 89999999887654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PRK09902 hypothetical protein; Provisional

Probab=97.84  E-value=0.00016  Score=43.15  Aligned_cols=68  Identities=9%  Similarity=0.065  Sum_probs=53.6

Q ss_pred             CCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            6 VNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         6 ~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      .||.+++.... .+.++..-..++.++...+..+|+.++.|+|+.+.||++..  .+...+.++||.-++.
T Consensus       111 ~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~--~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        111 ISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKT--EGKAEAGFLDLEKSRR  179 (216)
T ss_pred             ccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecC--CCCeeEEEEEhhccch
Confidence            67888876532 23567777888999999999999999999999999999943  2245699999987654

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.77  E-value=7.2e-05  Score=50.08  Aligned_cols=42  Identities=12%  Similarity=0.071  Sum_probs=31.9

Q ss_pred             HHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072           38 IHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus        38 ~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.+.+++|+|.+|.||++.........+.+.|||+.......
T Consensus       276 if~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~  317 (537)
T PRK04750        276 VFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE  317 (537)
T ss_pred             HHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence            346899999999999999432122348999999999876543

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=97.72  E-value=9.4e-05  Score=48.87  Aligned_cols=71  Identities=24%  Similarity=0.296  Sum_probs=61.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCc-cccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGV-AHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~-~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      |+-|+|.+.+......+++.-...+.+.++.|+.|+|...+ .|..++..|.++    +....+|+.|||+.....
T Consensus        29 c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClv----d~~w~lklt~~Gl~~~~~  100 (484)
T KOG1023|consen   29 CSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLV----DSRWVLKLTDFGLNSLLE  100 (484)
T ss_pred             ecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccccee----eeeEEEEechhhhccccc
Confidence            45689999998865558888888899999999999998655 999999999999    788999999999887663

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=97.67  E-value=2e-05  Score=55.74  Aligned_cols=42  Identities=24%  Similarity=0.264  Sum_probs=37.4

Q ss_pred             HHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072           32 LRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        32 ~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.++.|+|+-+++|+|++++|+++    ..-..+|+.|||+.+...
T Consensus       153 vla~Eylh~ygivhrdlkpdnllI----T~mGhiKlTDfgLsk~GL  194 (1205)
T KOG0606|consen  153 VLAVEYLHSYGIVHRDLKPDNLLI----TSMGHIKLTDFGLSKKGL  194 (1205)
T ss_pred             hHHhHhhccCCeecCCCCCCccee----eecccccccchhhhhhhh
Confidence            568999999999999999999999    667889999999987543

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.28  E-value=0.00082  Score=42.86  Aligned_cols=61  Identities=23%  Similarity=0.359  Sum_probs=49.6

Q ss_pred             CCCCHHHHHhhcc---cccCHHHHHHHHHHHHHHHHHHHHc--CccccCCCCCcEEEeeCCCCCceEEEe
Q 038072            4 SGVNFYNHSKKSA---KILLEHEVRRYTRDILRGLDHIHSH--GVAHCGIKLDNILLVPGKDAGFMAKIV   68 (97)
Q Consensus         4 ~g~~l~~~l~~~~---~~l~~~~~~~~~~~i~~~l~~~h~~--~~~~~~l~~~~i~~~~~~~~~~~~~i~   68 (97)
                      ..|++.++|++.+   ..+.....++|+.|+++|+.|+|+.  .++|.++....+++    +.+..+|+.
T Consensus       155 ssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifi----q~ngLIkig  220 (458)
T KOG1266|consen  155 SSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFI----QHNGLIKIG  220 (458)
T ss_pred             cchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheee----cCCceEEec
Confidence            4588888887642   3378888899999999999999986  58999999999999    656666654

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.22  E-value=0.00042  Score=46.22  Aligned_cols=75  Identities=20%  Similarity=0.248  Sum_probs=59.2

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHH----HHHHHHHcCccccCCCCCcEEEeeCCCCC-ceEEEeecCceeee
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILR----GLDHIHSHGVAHCGIKLDNILLVPGKDAG-FMAKIVARGDKCLH   76 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~----~l~~~h~~~~~~~~l~~~~i~~~~~~~~~-~~~~i~dfg~a~~~   76 (97)
                      +.+|.+|.++.......+++..++..+.+...    |+.++|...++|.++++.|+++    ..+ ...+..|||+....
T Consensus       198 E~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~----~~~~~s~~~~df~~v~~i  273 (524)
T KOG0601|consen  198 ELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFT----TSDWTSCKLTDFGLVSKI  273 (524)
T ss_pred             ccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheec----ccccceeecCCcceeEEc
Confidence            34566777776654344788888888888888    9999999999999999999998    445 77888999988766


Q ss_pred             ccCC
Q 038072           77 ERHG   80 (97)
Q Consensus        77 ~~~~   80 (97)
                      ....
T Consensus       274 ~~~~  277 (524)
T KOG0601|consen  274 SDGN  277 (524)
T ss_pred             cCCc
Confidence            5544

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.17  E-value=0.0076  Score=35.71  Aligned_cols=65  Identities=18%  Similarity=0.190  Sum_probs=45.4

Q ss_pred             CCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEee-cCceee
Q 038072            5 GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVA-RGDKCL   75 (97)
Q Consensus         5 g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~d-fg~a~~   75 (97)
                      +.+|.++++.  +.+++ ....   .+-....++.+..|+..|+++.||++.........+.++| ||....
T Consensus       107 s~TL~~~l~~--~~~~~-~~~~---~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G~~~~  172 (199)
T PF10707_consen  107 SPTLEDYLKE--GGLTE-ELRQ---ALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLIDGLGEKEL  172 (199)
T ss_pred             CccHHHHHHc--CCccH-HHHH---HHHHHHHHHHHcCCeecCCCcccEEEEecCCCceEEEEEeCCCCccc
Confidence            4678888865  33555 3333   3334567788999999999999999987645555788888 665543

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.07  E-value=0.0028  Score=38.21  Aligned_cols=41  Identities=22%  Similarity=0.354  Sum_probs=34.0

Q ss_pred             HHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCcee
Q 038072           29 RDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKC   74 (97)
Q Consensus        29 ~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~   74 (97)
                      ..+...+..+|+.|+.|.|..|.|+++.     +..+++.||+..+
T Consensus       142 ~ki~~~ikqlH~~G~~HGD~hpgNFlv~-----~~~i~iID~~~k~  182 (229)
T PF06176_consen  142 EKIVEAIKQLHKHGFYHGDPHPGNFLVS-----NNGIRIIDTQGKR  182 (229)
T ss_pred             HHHHHHHHHHHHcCCccCCCCcCcEEEE-----CCcEEEEECcccc
Confidence            4556678999999999999999999984     3458999998664

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=96.72  E-value=0.0085  Score=40.49  Aligned_cols=56  Identities=23%  Similarity=0.285  Sum_probs=47.3

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           19 LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        19 l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+|..++.++.|+..++.++|+.|+..+.+.+.+|++    .++-+++|...|.-.....
T Consensus       390 ~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv----~G~~RIriS~C~i~Dvl~~  445 (655)
T KOG3741|consen  390 APEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILV----TGKMRIRISGCGIMDVLQE  445 (655)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEe----eCcceEEEecccceeeecC
Confidence            7899999999999999999999999999999999999    5566777776665544444

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=96.55  E-value=0.0017  Score=43.48  Aligned_cols=67  Identities=33%  Similarity=0.332  Sum_probs=50.8

Q ss_pred             CCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            5 GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         5 g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      ++++...+... ..+++...+.+..|++.++.++|+...+|.|++++||++.+.   ....++.|||++..
T Consensus       350 ~~s~~l~~~~~-~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~---~~~~~~~~~~~~t~  416 (524)
T KOG0601|consen  350 GGSSSLRSVTS-QMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISND---GFFSKLGDFGCWTR  416 (524)
T ss_pred             CcchhhhhHHH-HhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccc---hhhhhccccccccc
Confidence            44444433222 337888899999999999999999999999999999999532   26667888887753

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=95.94  E-value=0.027  Score=35.23  Aligned_cols=49  Identities=14%  Similarity=0.129  Sum_probs=39.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCce
Q 038072           21 EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDK   73 (97)
Q Consensus        21 ~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a   73 (97)
                      ......++..++..+.-..+.+++|.|++.=||++    +++..+.+.||-=+
T Consensus       201 ~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV----~~dg~~~vIDwPQ~  249 (304)
T COG0478         201 VENPDEILDKILEEVRKAYRRGIVHGDLSEFNILV----TEDGDIVVIDWPQA  249 (304)
T ss_pred             ccCHHHHHHHHHHHHHHHHHcCccccCCchheEEE----ecCCCEEEEeCccc
Confidence            45556666777777777778999999999999999    77889999999433

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=95.74  E-value=0.051  Score=37.65  Aligned_cols=56  Identities=14%  Similarity=0.048  Sum_probs=46.2

Q ss_pred             CHHHHHHHHHHHHHHHHHHH-HcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072           20 LEHEVRRYTRDILRGLDHIH-SHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus        20 ~~~~~~~~~~~i~~~l~~~h-~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      ....+..-+.|++.|+.|+| +.+++|.++....+++    +....-++.+|-++......
T Consensus       102 ~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfV----n~~GeWkLggle~v~~~~~~  158 (690)
T KOG1243|consen  102 GKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFV----NESGEWKLGGLELVSKASGF  158 (690)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEE----cCCCcEEEeeeEEEeccccC
Confidence            35566667899999999997 6799999999999999    77888899998877654443

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=95.69  E-value=0.011  Score=34.60  Aligned_cols=36  Identities=17%  Similarity=0.255  Sum_probs=28.6

Q ss_pred             HcCccccCCCCCcEEEeeCCCC--CceEEEeecCceeeeccC
Q 038072           40 SHGVAHCGIKLDNILLVPGKDA--GFMAKIVARGDKCLHERH   79 (97)
Q Consensus        40 ~~~~~~~~l~~~~i~~~~~~~~--~~~~~i~dfg~a~~~~~~   79 (97)
                      ...++|.|+.+.|+++    ..  ...+.+.||+.+....+.
T Consensus       173 ~~~l~HgD~~~~Nil~----~~~~~~~~~iID~e~~~~g~~~  210 (223)
T cd05154         173 RPGLVHGDYRLGNVLF----HPDEPRVVAVLDWELATLGDPL  210 (223)
T ss_pred             CcEEEECCCCcccEEE----cCCCCcEEEEEeccccccCChH
Confidence            3578999999999999    44  456789999998765543

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=95.45  E-value=0.022  Score=34.22  Aligned_cols=38  Identities=16%  Similarity=0.145  Sum_probs=29.5

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      .+++|.|+.+.|+++    .......|.||+.+....+....
T Consensus       164 ~~l~HGD~~~~Nvlv----~~~~i~giIDw~~a~~gDp~~Dl  201 (235)
T cd05155         164 PVWFHGDLAPGNLLV----QDGRLSAVIDFGCLGVGDPACDL  201 (235)
T ss_pred             ceEEeCCCCCCcEEE----ECCCEEEEEeCcccCcCChHHHH
Confidence            458999999999999    44555679999998876654444

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=95.26  E-value=0.11  Score=32.22  Aligned_cols=50  Identities=16%  Similarity=0.205  Sum_probs=41.9

Q ss_pred             HHHHHHHHHHHHHHHHHH-cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072           23 EVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        23 ~~~~~~~~i~~~l~~~h~-~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      ++..+..+++..+.-|.. .+++|.|++.=||++    . ...+.|.|||=|....
T Consensus       167 e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~----~-~~~p~iID~~QaV~~~  217 (268)
T COG1718         167 EAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILV----H-DGEPYIIDVSQAVTID  217 (268)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCcccccchhhheEE----E-CCeEEEEECccccccC
Confidence            677778888888888877 899999999999999    3 6788999998776544

>PRK05231 homoserine kinase; Provisional

Probab=95.07  E-value=0.027  Score=35.30  Aligned_cols=32  Identities=22%  Similarity=0.364  Sum_probs=26.2

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      .+++|.|+.+.|+++    ..+....|.||+.+...
T Consensus       187 ~~liHgD~~~~Nil~----~~~~~~~iIDf~~~~~~  218 (319)
T PRK05231        187 RGVIHADLFRDNVLF----EGDRLSGFIDFYFACND  218 (319)
T ss_pred             cccCCCCCCCCcEEE----ECCceEEEEecccccCC
Confidence            479999999999999    54555689999988654

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=94.98  E-value=0.082  Score=34.75  Aligned_cols=54  Identities=20%  Similarity=0.174  Sum_probs=39.3

Q ss_pred             CHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           20 LEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        20 ~~~~~~~~~~~i~~~l~~~h~-~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ..+++..++.+-+.-+.-+.. ...-||++...||++    + +..+.+.||-+++.-..
T Consensus       319 ~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLI----d-~GnvtLIDfklsRl~~~  373 (488)
T COG5072         319 RSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILI----D-EGNVTLIDFKLSRLSYS  373 (488)
T ss_pred             cHHHHHHHHHHHHHHHhhhhhcCCcccccccccceee----e-cCceEEEEeeeeecccC
Confidence            456666666665444444443 368899999999999    6 78899999999985443

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=94.75  E-value=0.034  Score=33.45  Aligned_cols=35  Identities=26%  Similarity=0.334  Sum_probs=28.3

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      ..++|.|+.+.|+++    .......|.||+.+....+.
T Consensus       163 ~~l~HgD~~~~Nil~----~~~~~~~iIDwe~a~~gdp~  197 (244)
T cd05150         163 LVVTHGDACLPNIIV----DPGKFSGFIDLGRLGVADRY  197 (244)
T ss_pred             eEEECCCCCCccEEE----eCCcEEEEEEccccccccHH
Confidence            458999999999999    55556789999998766543

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=94.47  E-value=0.23  Score=33.76  Aligned_cols=54  Identities=15%  Similarity=0.071  Sum_probs=38.6

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           19 LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        19 l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+.+.+.....+.  .+..+-..+..|.|..|.|+++    ..+..+-+.|||.......
T Consensus       264 ~d~k~ia~~~~~~--f~~q~~~dgffHaDpHpGNi~v----~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         264 IDRKELAELLVRA--FLRQLLRDGFFHADPHPGNILV----RSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             CCHHHHHHHHHHH--HHHHHHhcCccccCCCccceEE----ecCCcEEEEcCcceecCCH
Confidence            5544443333322  2444556899999999999999    7778999999998876554

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=94.46  E-value=0.039  Score=32.45  Aligned_cols=35  Identities=17%  Similarity=0.089  Sum_probs=22.9

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ..++|.|+.+.||++.   ..+..+.|.||+.+....+
T Consensus       166 ~~~~HgD~~~~Nil~~---~~~~~i~iID~e~a~~~~~  200 (239)
T PF01636_consen  166 PVLIHGDLHPGNILVD---PSDGRIGIIDFEDAGWGDP  200 (239)
T ss_dssp             EEEE-SS-SGGGEEEE---SSTTEEEE--GTT-EEEET
T ss_pred             cEEEEeccccccceee---eccceeEEEecccceECCH
Confidence            5699999999999994   1345558999999887654

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=94.26  E-value=0.044  Score=32.98  Aligned_cols=35  Identities=11%  Similarity=0.010  Sum_probs=27.9

Q ss_pred             CccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCc
Q 038072           42 GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGL   81 (97)
Q Consensus        42 ~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~   81 (97)
                      .++|.|+.+.|+++    .++. +.+.||+.+....+...
T Consensus       154 ~~~HgD~~~~Nii~----~~~~-~~iIDwe~a~~Gdp~~D  188 (226)
T TIGR02172       154 TCLHGDFQIGNLIT----SGKG-TYWIDLGDFGYGNPLFD  188 (226)
T ss_pred             ceEecCCCCCcEEE----cCCC-cEEEechhcCcCCHHHH
Confidence            57899999999999    4444 88999999887665433

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=94.08  E-value=0.22  Score=29.28  Aligned_cols=55  Identities=13%  Similarity=0.132  Sum_probs=45.8

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHH---cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072           19 LLEHEVRRYTRDILRGLDHIHS---HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        19 l~~~~~~~~~~~i~~~l~~~h~---~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+|.....++.+++..+.+++.   ..+..-|++++|+.+    ..+..+++.|...+....
T Consensus        56 ~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv----~~~~~lk~iDld~v~~~~  113 (188)
T PF12260_consen   56 SPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGV----NDDGRLKLIDLDDVFVED  113 (188)
T ss_pred             cCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEE----eCCCcEEEEechhcchhH
Confidence            4788999999999999998876   458888999999999    667789999988765443

Proteins in this uncharacterised family are described as transmembrane proteins.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=93.99  E-value=0.12  Score=30.90  Aligned_cols=38  Identities=13%  Similarity=0.008  Sum_probs=29.7

Q ss_pred             cCccccCCCCCcEEEeeCCCC-CceEEEeecCceeeeccCCcc
Q 038072           41 HGVAHCGIKLDNILLVPGKDA-GFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~-~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      .+++|.|+.+.||++    .. +..+.+.||..|....+.-..
T Consensus       170 ~~l~H~Dl~~~Nil~----~~~~~~~~lIDwe~a~~~~~~~Dl  208 (235)
T cd05157         170 IVFCHNDLLSGNIIY----NEEKNSVKFIDYEYAGYNYRAFDI  208 (235)
T ss_pred             EEEEcCCCCcCcEEE----eCCCCCEEEEEcccCCcCchheeH
Confidence            368999999999999    44 357999999988776654443

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=93.98  E-value=0.16  Score=31.82  Aligned_cols=33  Identities=24%  Similarity=0.387  Sum_probs=26.6

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+++|.|+.+.|+++    ..+....+.||+.+....
T Consensus       187 ~~l~HgD~~~~Nvl~----~~~~~~~vIDfd~~~~~~  219 (307)
T TIGR00938       187 RGVIHADLFPDNVLF----DGDSVKGVIDFYFACTDA  219 (307)
T ss_pred             CccCCCCCCcCcEEE----ECCceEEEeecccccCcc
Confidence            589999999999999    444556899999885443

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=93.97  E-value=0.059  Score=33.37  Aligned_cols=33  Identities=24%  Similarity=0.404  Sum_probs=26.9

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+++|.|+.+.|+++    +.+..+.|.||..+....
T Consensus       175 ~~l~HgD~~~~Nil~----~~~~~~~iIDfe~a~~g~  207 (296)
T cd05153         175 RGVIHADLFRDNVLF----DGDELSGVIDFYFACTDA  207 (296)
T ss_pred             CcCCccCcCcccEEE----eCCceEEEeehhhhcCch
Confidence            479999999999999    555667899998876544

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=93.91  E-value=0.06  Score=33.49  Aligned_cols=41  Identities=15%  Similarity=-0.003  Sum_probs=29.0

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCc
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGL   81 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~   81 (97)
                      .+++|.|+.+.||++.........+.+.||..|....+.-.
T Consensus       179 ~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p~~D  219 (302)
T cd05156         179 VVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYRGFD  219 (302)
T ss_pred             ceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCcHHH
Confidence            36899999999999931000126789999999876655433

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=93.57  E-value=0.066  Score=34.12  Aligned_cols=38  Identities=16%  Similarity=0.161  Sum_probs=30.5

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      ..++|.|+.+.|+++    .....+-+.||+.+...++....
T Consensus       198 ~~lvHGD~~~gNlii----~~~~~~gVlDwe~~~lGDP~~Dl  235 (321)
T COG3173         198 PVLVHGDYRPGNLII----DPGRPTGVLDWELATLGDPLEDL  235 (321)
T ss_pred             ceeeeCCcccCCEEE----eCCCeeEEEeccccccCCcHHHH
Confidence            468999999999999    44555999999999877765443

>PRK10271 thiK thiamine kinase; Provisional

Probab=93.52  E-value=0.084  Score=31.11  Aligned_cols=33  Identities=9%  Similarity=0.038  Sum_probs=26.2

Q ss_pred             CccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072           42 GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus        42 ~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      ..+|.|+.+.|+++    .++. ++++||+.|...++.
T Consensus        78 ~p~H~D~~~~N~~~----~~~~-~~lIDwe~a~~gDp~  110 (188)
T PRK10271         78 APLHMDVHAGNLVH----SASG-LRLIDWEYAGDGDIA  110 (188)
T ss_pred             eeecCCCCCccEEE----ECCC-EEEEeCCcccCCCHH
Confidence            46999999999998    3334 889999998766553

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=93.50  E-value=0.39  Score=29.91  Aligned_cols=30  Identities=20%  Similarity=0.215  Sum_probs=24.4

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      .+++|.|+.+.|+++    .. ..+.+.||+.+..
T Consensus       187 ~~liHgD~~~~Nil~----~~-~~i~lIDfd~~~~  216 (313)
T TIGR02906       187 RGFCHQDYAYHNILL----KD-NEVYVIDFDYCTI  216 (313)
T ss_pred             CceEcCCCCcccEEE----eC-CcEEEEECccccc
Confidence            478999999999998    43 4578999997754

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=93.48  E-value=0.81  Score=30.98  Aligned_cols=48  Identities=15%  Similarity=0.222  Sum_probs=42.5

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeec
Q 038072           19 LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVAR   70 (97)
Q Consensus        19 l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~df   70 (97)
                      ..|.-+.+..+.++.+...+|.+|..-.|++++++++    .+...+.+.|-
T Consensus       114 ~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lV----sd~~~V~LVds  161 (637)
T COG4248         114 CAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLV----SDDSKVVLVDS  161 (637)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhcCCcccccCccceee----ecCceEEEEcc
Confidence            6788889999999999999999999999999999999    66777777764

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=93.28  E-value=0.72  Score=31.64  Aligned_cols=57  Identities=18%  Similarity=0.262  Sum_probs=39.1

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072           19 LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        19 l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      ++...+...+.+.-  ...+-..|.+|.|-.|.||++.+....+..+.+.|||+.....
T Consensus       300 i~~~~i~~~l~~~~--~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is  356 (538)
T KOG1235|consen  300 ISPHDILNKLVEAY--LEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS  356 (538)
T ss_pred             CCHHHHHHHHHHHH--HHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence            55554433333321  2334467899999999999997544467889999999886544

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=93.25  E-value=0.079  Score=32.90  Aligned_cols=38  Identities=11%  Similarity=0.173  Sum_probs=29.1

Q ss_pred             cCccccCCCCCcEEEeeCCCC-CceEEEeecCceeeeccCCcc
Q 038072           41 HGVAHCGIKLDNILLVPGKDA-GFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~-~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      ..++|.|+.+.|+++    .. .....|.||+.+...++....
T Consensus       185 ~~lvHGD~~~~Nilv----~~~~~~~gviDWe~a~iGDPa~Dl  223 (276)
T cd05152         185 TVLVHGDLHPGHILI----DEDARVTGLIDWTEAKVGDPARDF  223 (276)
T ss_pred             CeeEeCCCCCCcEEE----eCCCCEEEEECcHhcccCCHHHHH
Confidence            358999999999999    43 334679999999887664443

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=93.19  E-value=0.28  Score=30.46  Aligned_cols=32  Identities=16%  Similarity=0.075  Sum_probs=27.7

Q ss_pred             CccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072           42 GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        42 ~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .++|.|+.+.|++.    ++...+.+.||-.|...+
T Consensus       154 v~cH~Dl~~~N~l~----t~~~~l~LIDWEyAg~~D  185 (269)
T COG0510         154 VPCHNDLNPGNLLL----TDKGGLFLIDWEYAGLND  185 (269)
T ss_pred             eeecCCCCccceEE----cCCCcEEEEecccCCCcc
Confidence            68999999999999    667899999998876544

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=93.08  E-value=0.079  Score=31.12  Aligned_cols=39  Identities=8%  Similarity=-0.006  Sum_probs=28.4

Q ss_pred             cCccccCCCCCcEEEeeCCC-CCceEEEeecCceeeeccC
Q 038072           41 HGVAHCGIKLDNILLVPGKD-AGFMAKIVARGDKCLHERH   79 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~-~~~~~~i~dfg~a~~~~~~   79 (97)
                      ..++|+|+.+.|+++..... ....+.+.||..+....+.
T Consensus       120 ~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p~  159 (196)
T smart00587      120 NVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSPA  159 (196)
T ss_pred             eEEeeCCCCccceeeccCCCCCccceEEEecccCCcCChH
Confidence            46899999999999843111 1126889999998876653

subfamily of choline kinases

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=93.05  E-value=0.26  Score=31.57  Aligned_cols=29  Identities=21%  Similarity=0.369  Sum_probs=24.6

Q ss_pred             ccccCCCCCcEEEeeCCCCCc-eEEEeecCceee
Q 038072           43 VAHCGIKLDNILLVPGKDAGF-MAKIVARGDKCL   75 (97)
Q Consensus        43 ~~~~~l~~~~i~~~~~~~~~~-~~~i~dfg~a~~   75 (97)
                      ++|.|+.+.|+++    +... ...+.||+.+..
T Consensus       199 iIH~D~~~~NVl~----d~~~~~~g~iDFdDa~~  228 (331)
T COG2334         199 IIHGDLHPDNVLF----DDDTDVSGFIDFDDAGY  228 (331)
T ss_pred             eeecCCCccceeE----cCCCCeeeEEEcccccc
Confidence            8999999999999    5554 488999998864

>TIGR02721 ycfN_thiK thiamine kinase

Probab=93.04  E-value=0.091  Score=31.95  Aligned_cols=33  Identities=9%  Similarity=0.032  Sum_probs=26.2

Q ss_pred             CccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072           42 GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus        42 ~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .++|.|+.+.|+++.    .+. +.+.||..|....+.
T Consensus       147 ~l~H~Dl~~~Nil~~----~~~-~~lIDwE~a~~gdp~  179 (256)
T TIGR02721       147 APLHMDVHAYNLVVT----PQG-LKLIDWEYASDGDIA  179 (256)
T ss_pred             eeecCCCCcCcEEEe----CCC-CEEEeccccCcCCHH
Confidence            589999999999994    333 689999988766543

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PRK06149 hypothetical protein; Provisional

Probab=92.66  E-value=0.32  Score=35.48  Aligned_cols=36  Identities=19%  Similarity=0.157  Sum_probs=25.6

Q ss_pred             HcCccccCCCCCcEEEeeCCCCC-ceEEEeecCceee
Q 038072           40 SHGVAHCGIKLDNILLVPGKDAG-FMAKIVARGDKCL   75 (97)
Q Consensus        40 ~~~~~~~~l~~~~i~~~~~~~~~-~~~~i~dfg~a~~   75 (97)
                      ..+++|.|+...|+++....... ....|.|||.+..
T Consensus       207 ~~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~~  243 (972)
T PRK06149        207 PLQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDLVR  243 (972)
T ss_pred             cccccCCCCCcccEEEcCCCCCCcceeEEEEcccchh
Confidence            46899999999999994311111 3357999998754

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=92.11  E-value=0.093  Score=36.55  Aligned_cols=46  Identities=20%  Similarity=0.195  Sum_probs=37.8

Q ss_pred             HHHHHHHHHHHH-cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           29 RDILRGLDHIHS-HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        29 ~~i~~~l~~~h~-~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .++..|+.++|. .+++|..+.+++|.+    +.....|++.|+++.....
T Consensus       106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~----na~~~wkl~Gf~f~v~~~~  152 (700)
T KOG2137|consen  106 GNVADGLAFLHRSAKVVHGNIQPEAIVV----NANGDWKLAGFSFCVNANG  152 (700)
T ss_pred             hcccchhhhhccCcceeecccchhheee----ccCcceeeccchhhhccCC
Confidence            445578899996 489999999999999    7788889999988765444

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=91.87  E-value=0.64  Score=30.45  Aligned_cols=39  Identities=15%  Similarity=0.221  Sum_probs=31.5

Q ss_pred             HHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecC
Q 038072           29 RDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARG   71 (97)
Q Consensus        29 ~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg   71 (97)
                      ..+...+.-+..+|+||.|+..=||++    .+...++++||-
T Consensus       209 ~~lm~~Iv~la~~GlIHgDFNEFNimv----~dd~~i~vIDFP  247 (465)
T KOG2268|consen  209 DDLMGLIVRLANHGLIHGDFNEFNIMV----KDDDKIVVIDFP  247 (465)
T ss_pred             HHHHHHHHHHHHcCceecccchheeEE----ecCCCEEEeech
Confidence            334445666778999999999999999    667889999994

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=91.65  E-value=0.39  Score=28.79  Aligned_cols=40  Identities=25%  Similarity=0.282  Sum_probs=31.6

Q ss_pred             HHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCce
Q 038072           25 RRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDK   73 (97)
Q Consensus        25 ~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a   73 (97)
                      ..-+.++..-+..+|+.+++-+|++..|..-         -+++|||.+
T Consensus       167 ~~~~~~~~~dl~~~~k~gI~~~Dv~~~ny~~---------G~lvDfs~~  206 (207)
T PF13095_consen  167 IRDIPQMLRDLKILHKLGIVPRDVKPRNYRG---------GKLVDFSSS  206 (207)
T ss_pred             hhHHHHHHHHHHHHHHCCeeeccCccccccC---------CEEEecccC
Confidence            3345667777889999999999999988753         388999865

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=91.41  E-value=0.088  Score=38.51  Aligned_cols=64  Identities=19%  Similarity=0.193  Sum_probs=50.5

Q ss_pred             CCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCce
Q 038072            5 GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDK   73 (97)
Q Consensus         5 g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a   73 (97)
                      |++|.+.+... ++.+.+-+..+...+..+.+++|...+.|+++++.+++.    ......++.+|+..
T Consensus       888 ~~~~~Skl~~~-~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~----~~~gh~~l~~~~t~  951 (1205)
T KOG0606|consen  888 GGDLPSKLHNS-GCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLI----AYDGHRPLTDFGTL  951 (1205)
T ss_pred             cCCchhhhhcC-CCcccccccchhHHHHhhhhccccchhhcccccccchhh----cccCCcccCccccc
Confidence            57777777765 446666777777778889999999999999999999998    55677788888743

>PLN02236 choline kinase

Probab=90.60  E-value=0.71  Score=29.67  Aligned_cols=35  Identities=14%  Similarity=0.202  Sum_probs=27.5

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ..++|.|+.+.||++.   .....+.+.||..|....+
T Consensus       200 ~~~cH~Dl~~~Nil~~---~~~~~~~lID~Eya~~~~~  234 (344)
T PLN02236        200 IGFCHNDLQYGNIMID---EETRAITIIDYEYASYNPV  234 (344)
T ss_pred             ceEEeCCCCcCcEEEe---CCCCcEEEEeehhccccch
Confidence            3689999999999983   1235799999998876554

>COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]

Probab=89.66  E-value=0.63  Score=29.80  Aligned_cols=38  Identities=8%  Similarity=0.108  Sum_probs=29.9

Q ss_pred             HcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072           40 SHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        40 ~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      ..+.+|||..+.|+++.........+.|.||--|.+..
T Consensus       199 ~~vlvhRDfh~~NLmw~~~~~g~~rvGvlDFQDA~iGP  236 (351)
T COG3178         199 PKVLVHRDFHSRNLMWTADRAGADRVGVLDFQDALIGP  236 (351)
T ss_pred             CceeeeccccCccceecCCccCCCCCceeehhhhhcCc
Confidence            35799999999999996554555789999998776543

>PRK06148 hypothetical protein; Provisional

Probab=89.51  E-value=0.41  Score=35.14  Aligned_cols=35  Identities=23%  Similarity=0.228  Sum_probs=25.3

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      ++++|.|+...||++... ......-|.|||.+...
T Consensus       203 ~~vIHgDln~~NiLv~~~-~~~~isGiIDFgDa~~~  237 (1013)
T PRK06148        203 AQVIHNDANDYNILVDAD-DGERISGLIDFGDAVHA  237 (1013)
T ss_pred             cceECCCCCcccEEEcCC-CCcceEEEEECcccccc
Confidence            579999999999999421 11134559999987653

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=89.01  E-value=0.96  Score=28.05  Aligned_cols=40  Identities=13%  Similarity=-0.007  Sum_probs=29.3

Q ss_pred             cCccccCCCCCcEEEeeCCC-CCceEEEeecCceeeeccCC
Q 038072           41 HGVAHCGIKLDNILLVPGKD-AGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~-~~~~~~i~dfg~a~~~~~~~   80 (97)
                      ..++|.|+...||+....+. .-..+.+.||..++...+..
T Consensus       215 ~vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~g~p~~  255 (294)
T PF02958_consen  215 NVLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARYGSPAI  255 (294)
T ss_pred             eEEEcCccCHHhEeEccccccccccceeeccccccCCCcHh
Confidence            36899999999999854211 12468999999988766543

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=88.47  E-value=0.33  Score=30.45  Aligned_cols=34  Identities=12%  Similarity=0.106  Sum_probs=27.5

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.|+.+.|+++    .++..+.+.||-.+....+
T Consensus       196 ~~lcHgD~~~~Nvl~----~~~~~~~iIDfd~~~~d~~  229 (309)
T TIGR02904       196 TVLVHGKLSLSHFLY----DETRGGYFINFEKASFASP  229 (309)
T ss_pred             eeeeCCCCcHHhEEE----cCCCCEEEEEhhhcccCCc
Confidence            379999999999999    6666788999988765443

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PHA03111 Ser/Thr kinase; Provisional

Probab=88.32  E-value=2.1  Score=28.18  Aligned_cols=36  Identities=22%  Similarity=0.180  Sum_probs=23.5

Q ss_pred             HHHHHHHHHHHHHHHHH----HcCccccCCCCCcEEEeeC
Q 038072           23 EVRRYTRDILRGLDHIH----SHGVAHCGIKLDNILLVPG   58 (97)
Q Consensus        23 ~~~~~~~~i~~~l~~~h----~~~~~~~~l~~~~i~~~~~   58 (97)
                      -++.+.-|++.-...+.    ..+.+|-|+||+||++.+.
T Consensus       280 YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds  319 (444)
T PHA03111        280 YIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDS  319 (444)
T ss_pred             HHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecC
Confidence            34555566654332232    3478999999999998654

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=87.97  E-value=1.2  Score=28.43  Aligned_cols=50  Identities=18%  Similarity=0.398  Sum_probs=38.4

Q ss_pred             CCHHHHHhhcccc-cCHHHHHHHHHHHHHHHHHHHHcC--ccccCCCCCcEEE
Q 038072            6 VNFYNHSKKSAKI-LLEHEVRRYTRDILRGLDHIHSHG--VAHCGIKLDNILL   55 (97)
Q Consensus         6 ~~l~~~l~~~~~~-l~~~~~~~~~~~i~~~l~~~h~~~--~~~~~l~~~~i~~   55 (97)
                      |+|+..+.+..+. .+..++..++-.++.++.|+|+-.  +...-+....+++
T Consensus       272 gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmi  324 (448)
T KOG0195|consen  272 GSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMI  324 (448)
T ss_pred             hHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEe
Confidence            7899999876333 577888999999999999999853  3344556677777

>PRK11768 serine/threonine protein kinase; Provisional

Probab=87.73  E-value=1.5  Score=27.89  Aligned_cols=30  Identities=20%  Similarity=0.061  Sum_probs=24.3

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      .+++|.|+.+.|+++    .+  .+.+.||+.+...
T Consensus       196 ~~liHgD~h~~NvL~----~d--~~~iIDFDd~~~g  225 (325)
T PRK11768        196 LLRLHGDCHPGNILW----RD--GPHFVDLDDARMG  225 (325)
T ss_pred             ccceecCCCchhccc----cC--CcEEEeCCCCCCC
Confidence            468999999999998    32  4689999988653

>PLN02876 acyl-CoA dehydrogenase

Probab=87.40  E-value=0.61  Score=33.44  Aligned_cols=37  Identities=19%  Similarity=0.335  Sum_probs=27.2

Q ss_pred             CccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072           42 GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus        42 ~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      .++|.|+++.|+++.+.  .....-|.||.++...++..
T Consensus       226 ~LvHGD~~~~Nvl~~~~--~~~v~aVLDWE~a~~GdPl~  262 (822)
T PLN02876        226 GIVHGDFRIDNLVFHPT--EDRVIGILDWELSTLGNQMC  262 (822)
T ss_pred             ceEecCcccccEEEcCC--CCeEEEEEeeeccccCChHH
Confidence            59999999999999431  22346799999887765433

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=87.34  E-value=0.62  Score=27.49  Aligned_cols=35  Identities=17%  Similarity=0.159  Sum_probs=22.7

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ....|.|+.+.||++.   .....+++.||-.|....+
T Consensus       143 ~v~cHnDl~~~Nil~~---~~~~~~~lIDfEya~~n~~  177 (211)
T PF01633_consen  143 LVFCHNDLNPGNILIN---NKDGEVKLIDFEYAGYNDR  177 (211)
T ss_dssp             EEEE-S--SGGGEEET---SSSSCEEE--GTT-EEEEH
T ss_pred             ceEeeccCccccEEec---cCCCeEEEecHHHHhhccc
Confidence            4689999999999982   3468899999998876543

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=86.07  E-value=0.76  Score=30.34  Aligned_cols=34  Identities=9%  Similarity=0.097  Sum_probs=26.8

Q ss_pred             HcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           40 SHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        40 ~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ...++|.|+.+.||++.    . ..+++.||-++....+
T Consensus       222 ~~~l~HgDl~~gni~~~----~-~~~~viD~E~a~~G~~  255 (401)
T PRK09550        222 AEALLHGDLHTGSIFVT----E-EETKVIDPEFAFYGPI  255 (401)
T ss_pred             CCceeeccCCcccEEee----C-CCcEEEeccccccCCh
Confidence            35799999999999994    2 2589999988876544

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=85.82  E-value=0.91  Score=28.97  Aligned_cols=35  Identities=14%  Similarity=0.017  Sum_probs=27.3

Q ss_pred             CccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072           42 GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus        42 ~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      ..+|.|+.+.||++.   ..+..+++.||..|....+.
T Consensus       183 v~CHnDl~~~NiL~~---~~~~~l~lID~EYag~nd~~  217 (330)
T PLN02421        183 VFAHNDLLSGNLMLN---EDEGKLYFIDFEYGSYSYRG  217 (330)
T ss_pred             EEEECCCCcccEEEe---CCCCcEEEEcccccCCCccH
Confidence            479999999999983   13467999999988765543

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=84.52  E-value=1.7  Score=28.61  Aligned_cols=19  Identities=32%  Similarity=0.492  Sum_probs=15.7

Q ss_pred             HcCccccCCCCCcEEEeeC
Q 038072           40 SHGVAHCGIKLDNILLVPG   58 (97)
Q Consensus        40 ~~~~~~~~l~~~~i~~~~~   58 (97)
                      ..+.+|-|+||+||++-+.
T Consensus       297 c~nF~H~DLKPdNILiFds  315 (434)
T PF05445_consen  297 CTNFLHVDLKPDNILIFDS  315 (434)
T ss_pred             cceeeecccCcCcEEEecC
Confidence            3478999999999998653

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=83.02  E-value=1.5  Score=27.24  Aligned_cols=38  Identities=26%  Similarity=0.197  Sum_probs=30.4

Q ss_pred             HHHHHHHHH--cCccccCCCCCcEEEeeCCCCCceEEEeecCce
Q 038072           32 LRGLDHIHS--HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDK   73 (97)
Q Consensus        32 ~~~l~~~h~--~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a   73 (97)
                      +..+.-.|+  .+.+|.|..|+||+.    +....+|+.|-+..
T Consensus       151 i~~L~~fH~~~~~~lHGD~np~NiM~----D~~G~lKlVDP~~L  190 (308)
T PF07387_consen  151 IKDLMDFHSENQHCLHGDCNPDNIMC----DKFGYLKLVDPVCL  190 (308)
T ss_pred             HHHHHHhhccCCCeecCCCChhheee----cCCCCEEecChhhh
Confidence            345666774  479999999999999    77888999997754

The function of this family is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	97
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		7e-04
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		7e-04
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		8e-04

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/93 (33%), Positives = 38/93 (40%), Gaps = 16/93 (17%)
Query: 5   GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFM 64
           G +   H +     L E +V  Y RD L  L H+HS G+ H  +K  NI L P       
Sbjct: 140 GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGP------- 192
Query: 65  AKIVARGDKCLHERHGL---LNVTGVGEGQVAD 94
                RG +C     GL   L   G GE Q  D
Sbjct: 193 -----RG-RCKLGDFGLLVELGTAGAGEVQEGD 219

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 13  KKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGD 72
           K   K   E+E R +   I+ G+ ++HSHG+ H  + L N+LL    +       +A   
Sbjct: 103 KNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQL 162
Query: 73  KCLHERHGLL 82
           K  HE+H  L
Sbjct: 163 KMPHEKHYTL 172

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 38.5 bits (88), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 4   SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGF 63
           SG   +++  K+ + L E E RR  + IL G+D+ H H V H  +K +N+LL    DA  
Sbjct: 99  SGGELFDYICKNGR-LDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL----DAHM 153
Query: 64  MAKIVARG 71
            AKI   G
Sbjct: 154 NAKIADFG 161

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	97
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	5e-11
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-10
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-10
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-10
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-10
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	4e-10
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	4e-10
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	6e-10
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-09
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	7e-09
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-08
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-08
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-08
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-08
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-08
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-08
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	4e-08
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	4e-08
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	6e-08
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	6e-08
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	7e-08
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	7e-08
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	7e-08
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-07
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-07
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-07
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-07
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-07
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-07
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-07
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-07
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-07
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-07
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-07
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	2e-07
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-07
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-07
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-07
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	3e-07
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	3e-07
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	3e-07
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	3e-07
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	4e-07
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	5e-07
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	5e-07
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	6e-07
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	6e-07
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	7e-07
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	8e-07
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	8e-07
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	9e-07
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	9e-07
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-06
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	1e-06
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-06
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-06
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-06
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-06
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-06
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	2e-06
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	2e-06
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	2e-06
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-06
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-06
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-06
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-06
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-06
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	3e-06
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	3e-06
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	3e-06
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	3e-06
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	3e-06
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	3e-06
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-06
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	4e-06
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-06
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	5e-06
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	5e-06
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	5e-06
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	5e-06
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	6e-06
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	6e-06
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	6e-06
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	6e-06
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	7e-06
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	7e-06
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	7e-06
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	7e-06
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	8e-06
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	8e-06
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	8e-06
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	8e-06
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	9e-06
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	9e-06
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-05
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	1e-05
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-05
3niz_A	311	Rhodanese family protein; structural genomics, str	1e-05
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	1e-05
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	1e-05
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-05
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-05
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-05
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	2e-05
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-05
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-05
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-05
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-05
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-05
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-05
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	2e-05
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	2e-05
3o0g_A	292	Cell division protein kinase 5; kinase activator c	2e-05
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	3e-05
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	3e-05
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	3e-05
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	3e-05
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	3e-05
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	3e-05
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	3e-05
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	3e-05
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	3e-05
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	4e-05
3fme_A	290	Dual specificity mitogen-activated protein kinase;	4e-05
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	4e-05
3ork_A	311	Serine/threonine protein kinase; structural genomi	4e-05
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	5e-05
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	5e-05
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	5e-05
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	6e-05
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	6e-05
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	6e-05
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	7e-05
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	7e-05
3rp9_A	458	Mitogen-activated protein kinase; structural genom	8e-05
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	1e-04
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-04
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-04
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	3e-04
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	3e-04
3uqc_A	286	Probable conserved transmembrane protein; structur	4e-04
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	4e-04
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	5e-04
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	5e-04
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	5e-04
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-04
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	6e-04
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	7e-04
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	7e-04
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	7e-04
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	7e-04
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	7e-04
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	9e-04

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 56.2 bits (136), Expect = 5e-11
 Identities = 18/47 (38%), Positives = 23/47 (48%)

Query: 9   YNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
             H +     L E +V  Y RD L  L H+HS G+ H  +K  NI L
Sbjct: 144 QQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFL 190

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 54.9 bits (132), Expect = 2e-10
 Identities = 18/57 (31%), Positives = 30/57 (52%)

Query: 12  SKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV 68
              +A  L E E     RD++ G++H+  +G+ H  IK  NI+ V G+D   + K+ 
Sbjct: 102 EPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLT 158

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 54.4 bits (131), Expect = 2e-10
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%)

Query: 14  KSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPG--KDAGF-MAKIVAR 70
           K  K +   E + Y +++L  +  IH HG+ H  +K  N L+V G  K   F +A  +  
Sbjct: 147 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQP 206

Query: 71  GDKCLH 76
               + 
Sbjct: 207 DTTSVV 212

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 54.3 bits (131), Expect = 2e-10
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%)

Query: 14  KSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPG--KDAGF-MAKIVAR 70
           K  K +   E + Y +++L  +  IH HG+ H  +K  N L+V G  K   F +A  +  
Sbjct: 100 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQP 159

Query: 71  GDKCLH 76
               + 
Sbjct: 160 DTTSVV 165

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 53.9 bits (130), Expect = 3e-10
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%)

Query: 14  KSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPG--KDAGF-MAKIVAR 70
           K  K +   E + Y +++L  +  IH HG+ H  +K  N L+V G  K   F +A  +  
Sbjct: 119 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQP 178

Query: 71  GDKCLH 76
               + 
Sbjct: 179 DTTSVV 184

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 53.6 bits (129), Expect = 4e-10
 Identities = 18/58 (31%), Positives = 30/58 (51%)

Query: 11  HSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV 68
               +A  L E E     RD++ G++H+  +G+ H  IK  NI+ V G+D   + K+ 
Sbjct: 101 EEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLT 158

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 53.5 bits (129), Expect = 4e-10
 Identities = 13/46 (28%), Positives = 22/46 (47%)

Query: 10  NHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           + + +      E E++     + RGL +IHS  + H  IK  NI +
Sbjct: 103 SENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 148

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 53.1 bits (128), Expect = 6e-10
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 13/88 (14%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPG----KDAGF-MAKIVARGDKCL 75
           E  +  YT+ IL GL ++H + + H  IK DN+L+       K + F  +K +A  + C 
Sbjct: 121 EQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT 180

Query: 76  HERHG--------LLNVTGVGEGQVADI 95
               G        +++    G G+ ADI
Sbjct: 181 ETFTGTLQYMAPEIIDKGPRGYGKAADI 208

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 52.4 bits (126), Expect = 1e-09
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 14  KSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           K    L E     Y    L GL+++H+  + H  +K DN+LL
Sbjct: 142 KQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL 183

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 50.2 bits (121), Expect = 7e-09
 Identities = 16/47 (34%), Positives = 26/47 (55%)

Query: 9   YNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
             + K   K   E+E R +   I+ G+ ++HSHG+ H  + L N+LL
Sbjct: 99  NRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLL 145

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 49.6 bits (119), Expect = 1e-08
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 14  KSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           K  K L E E R Y R I+ G  ++H + V H  +KL N+ L
Sbjct: 133 KRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 174

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 14  KSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           K  K L E E R Y R I+ G  ++H + V H  +KL N+ L
Sbjct: 107 KRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 148

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 48.9 bits (117), Expect = 2e-08
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 14  KSAKILLEHEVRRYTRDILRGLDHIHSHG--VAHCGIKLDNILL 55
           K  K++    +R + R IL+GL  +H+    + H  +K DNI +
Sbjct: 121 KRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFI 164

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 48.5 bits (116), Expect = 2e-08
 Identities = 15/46 (32%), Positives = 24/46 (52%)

Query: 10  NHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
            H KK  +++ E  V +Y   +   L+H+HS  V H  IK  N+ +
Sbjct: 124 KHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI 169

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 48.4 bits (115), Expect = 2e-08
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 7   NFYNHSKK-SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           N  N  K    K++ +  V  +   +L  ++ +H   + H  IK DN +L
Sbjct: 156 NAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFIL 205

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 48.2 bits (115), Expect = 3e-08
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 13  KKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL-VPGKDAGFMAKI 67
           ++     L  E     +    GL H+HS  + H  +K  NIL+ +P       A I
Sbjct: 109 EQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMI 164

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 48.1 bits (114), Expect = 4e-08
 Identities = 15/52 (28%), Positives = 26/52 (50%)

Query: 9   YNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKD 60
           Y +  ++   L E  +R    DI   L ++H + + H  +K +NI+L PG  
Sbjct: 108 YLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQ 159

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 47.9 bits (114), Expect = 4e-08
 Identities = 15/53 (28%), Positives = 24/53 (45%)

Query: 10  NHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAG 62
           N S ++ K+  E+      R I  G+ H+HS  + H  +K  NIL+       
Sbjct: 103 NVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFT 155

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 47.4 bits (113), Expect = 6e-08
 Identities = 18/50 (36%), Positives = 23/50 (46%)

Query: 6   VNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
            N     K     L E ++      I RGL+ IH+ G AH  +K  NILL
Sbjct: 118 WNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILL 167

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 47.3 bits (113), Expect = 6e-08
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 5/64 (7%)

Query: 15  SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL-VPGK----DAGFMAKIVA 69
           +   + E ++    R+ L+ L+ +HS+ V H  IK DNILL + G     D GF A+I  
Sbjct: 109 TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168

Query: 70  RGDK 73
              K
Sbjct: 169 EQSK 172

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 47.5 bits (113), Expect = 7e-08
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLV 56
           E E   Y R + +GL H+H +   H  +K +NI+  
Sbjct: 254 EDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFT 289

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 47.5 bits (113), Expect = 7e-08
 Identities = 12/37 (32%), Positives = 20/37 (54%)

Query: 22  HEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPG 58
            E   Y  +IL  L ++HS G+ +  +K +NI+L   
Sbjct: 182 AEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE 218

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 47.4 bits (113), Expect = 7e-08
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDA 61
           E EV  Y R    GL H+H H + H  IK +NI+    K +
Sbjct: 148 EAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKAS 188

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 46.9 bits (111), Expect = 1e-07
 Identities = 9/35 (25%), Positives = 19/35 (54%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
            H   + T  ++R L  +H +G+ H  ++  +I+L
Sbjct: 205 HHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL 239

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 47.0 bits (111), Expect = 1e-07
 Identities = 10/37 (27%), Positives = 21/37 (56%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           L+ H   + T  ++R L  +H +G+ H  ++  +I+L
Sbjct: 208 LVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL 244

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 46.9 bits (112), Expect = 1e-07
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 13  KKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           K+  + L +         I +G+D+IHS  + +  +K  NI L
Sbjct: 113 KRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFL 155

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 46.6 bits (111), Expect = 1e-07
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 5/64 (7%)

Query: 15  SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL-----VPGKDAGFMAKIVA 69
           S   L E ++      +L+ L ++H+ GV H  IK D+ILL     V   D GF A+I  
Sbjct: 134 SQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK 193

Query: 70  RGDK 73
              K
Sbjct: 194 DVPK 197

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 46.1 bits (110), Expect = 2e-07
 Identities = 11/45 (24%), Positives = 20/45 (44%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMA 65
           E E+  Y   +   L  +HSH + H  I+ +NI+    + +    
Sbjct: 101 EREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKI 145

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 46.1 bits (110), Expect = 2e-07
 Identities = 13/48 (27%), Positives = 27/48 (56%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV 68
           E E   + + IL G++++H+  +AH  +K +NI+L+         K++
Sbjct: 114 EEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLI 161

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 46.2 bits (110), Expect = 2e-07
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
             E  R  R IL  L +IHS G+ H  +K  NI +
Sbjct: 115 RDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI 149

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 46.0 bits (109), Expect = 2e-07
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDA 61
           E  +    R I   L ++H+ G+ H  IK +N L    K  
Sbjct: 167 EKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSF 207

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 46.1 bits (110), Expect = 2e-07
 Identities = 15/48 (31%), Positives = 26/48 (54%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV 68
           E E   + + IL G+ ++HS  +AH  +K +NI+L+         KI+
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKII 160

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 46.2 bits (110), Expect = 2e-07
 Identities = 16/52 (30%), Positives = 23/52 (44%)

Query: 4   SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
            G +      K  + +     R Y  +I+  +D +H  G  H  IK DNILL
Sbjct: 144 VGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL 195

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 46.1 bits (109), Expect = 2e-07
 Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 5/60 (8%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL-----VPGKDAGFMAKIVARGDK 73
           + E  +    + +L+ LD+IH  G  H  +K  +IL+     V          +++ G +
Sbjct: 125 MNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQR 184

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 45.9 bits (109), Expect = 2e-07
 Identities = 14/33 (42%), Positives = 22/33 (66%)

Query: 24  VRRYTRDILRGLDHIHSHGVAHCGIKLDNILLV 56
           VR++   IL+ LD +H + + HC +K +NILL 
Sbjct: 202 VRKFAHSILQCLDALHKNRIIHCDLKPENILLK 234

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 45.7 bits (109), Expect = 2e-07
 Identities = 12/37 (32%), Positives = 24/37 (64%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           L E + R Y +D+++G++++H   + H  IK  N+L+
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV 170

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 14/48 (29%), Positives = 27/48 (56%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV 68
           E E  ++ + IL G+ ++HS  +AH  +K +NI+L+         K++
Sbjct: 107 EDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLI 154

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 45.8 bits (109), Expect = 2e-07
 Identities = 15/43 (34%), Positives = 22/43 (51%)

Query: 13  KKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           +   K L E E+    +  L+GL+++H     H  IK  NILL
Sbjct: 116 RLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL 158

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 45.5 bits (108), Expect = 3e-07
 Identities = 17/43 (39%), Positives = 24/43 (55%)

Query: 13  KKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           +   K L E E+   T   L+GL ++HSH + H  +K  NILL
Sbjct: 145 EVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL 187

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 45.5 bits (108), Expect = 3e-07
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLV 56
           E +   + + I  G+ H+H   + H  +K +NIL V
Sbjct: 186 ELDTILFMKQICEGIRHMHQMYILHLDLKPENILCV 221

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 45.4 bits (108), Expect = 3e-07
 Identities = 11/52 (21%), Positives = 22/52 (42%)

Query: 24  VRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL 75
           VR     +   L  +H + + H  +K +NIL V  +      +  +  +K +
Sbjct: 125 VRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV 176

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 45.4 bits (108), Expect = 3e-07
 Identities = 13/48 (27%), Positives = 27/48 (56%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV 68
           E E   + + IL G++++H+  +AH  +K +NI+L+         K++
Sbjct: 114 EEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLI 161

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 45.0 bits (107), Expect = 4e-07
 Identities = 11/43 (25%), Positives = 23/43 (53%)

Query: 13  KKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
            +  + L E +++   R +L  L+ +HS  + H  +K  N+L+
Sbjct: 108 LELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLM 150

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 44.9 bits (107), Expect = 5e-07
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 13  KKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV 68
            + A+++ E++V R  + IL G+ ++H + + H  +K  NILL          KIV
Sbjct: 122 PELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLS-SIYPLGDIKIV 176

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 44.7 bits (106), Expect = 5e-07
 Identities = 14/47 (29%), Positives = 20/47 (42%)

Query: 9   YNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
                K    L E   R Y  +++  +D +H     H  IK DNIL+
Sbjct: 162 LTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM 208

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 44.9 bits (106), Expect = 6e-07
 Identities = 8/35 (22%), Positives = 13/35 (37%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
                     I   ++ +HS G+ H  +K  NI  
Sbjct: 163 HGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFF 197

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 44.7 bits (105), Expect = 6e-07
 Identities = 7/35 (20%), Positives = 15/35 (42%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
              +   T  ++R   ++ S G+ H     DN+ +
Sbjct: 193 ILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFI 227

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 44.2 bits (105), Expect = 7e-07
 Identities = 17/50 (34%), Positives = 25/50 (50%)

Query: 11  HSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKD 60
           H  K  + +    ++ Y   +LR L +IHS G+ H  IK  N+LL P   
Sbjct: 130 HYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSG 179

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 44.2 bits (105), Expect = 8e-07
 Identities = 12/37 (32%), Positives = 20/37 (54%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
               +   Y   ++ GL+++HS G+ H  IK  N+LL
Sbjct: 106 FPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLL 142

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 44.3 bits (105), Expect = 8e-07
 Identities = 18/40 (45%), Positives = 22/40 (55%)

Query: 16  AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
              L E  +    R+ILRGL H+H H V H  IK  N+LL
Sbjct: 123 GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL 162

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 44.3 bits (105), Expect = 9e-07
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV 68
           EH+  R  + +  G+ ++H H + H  +K +NILL   K+     KI+
Sbjct: 120 EHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLE-SKEKDCDIKII 166

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 44.3 bits (105), Expect = 9e-07
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV 68
           E +     + IL G+ ++H H + H  IK +NILL   K++    KIV
Sbjct: 145 ECDAANIMKQILSGICYLHKHNIVHRDIKPENILLE-NKNSLLNIKIV 191

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 43.9 bits (104), Expect = 1e-06
 Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 13  KKSAKILL-EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
                +L  E ++  +   I   L H+H   + H  IK  NI L
Sbjct: 115 NAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL 158

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 43.9 bits (104), Expect = 1e-06
 Identities = 16/45 (35%), Positives = 24/45 (53%)

Query: 11  HSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           H  ++ + L    V+ Y   + R L +IHS G+ H  IK  N+LL
Sbjct: 145 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 189

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 43.9 bits (104), Expect = 1e-06
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV 68
           E +     + +L G+ ++H H + H  +K +N+LL   K+   + KIV
Sbjct: 135 EVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLE-SKEKDALIKIV 181

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 43.9 bits (104), Expect = 1e-06
 Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV 68
           E +  R  R +L G+ ++H + + H  +K +N+LL   K      +I+
Sbjct: 125 EVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLE-SKSKDANIRII 171

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 43.5 bits (103), Expect = 2e-06
 Identities = 14/47 (29%), Positives = 25/47 (53%)

Query: 9   YNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
               +  + +L E  +    R++L GL+++H +G  H  +K  NILL
Sbjct: 108 VAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL 154

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 43.5 bits (103), Expect = 2e-06
 Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKI 67
           E   + Y   +L  + ++H +G+ H  +K +N+LL   ++   + KI
Sbjct: 238 EATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS-SQEEDCLIKI 283

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 43.5 bits (103), Expect = 2e-06
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 5/63 (7%)

Query: 16  AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL-VPGK----DAGFMAKIVAR 70
              L E ++    R+IL+GLD++HS    H  IK  N+LL   G+    D G   ++   
Sbjct: 113 PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172

Query: 71  GDK 73
             K
Sbjct: 173 QIK 175

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 43.5 bits (103), Expect = 2e-06
 Identities = 10/33 (30%), Positives = 20/33 (60%)

Query: 24  VRRYTRDILRGLDHIHSHGVAHCGIKLDNILLV 56
           ++ Y  +IL+ L+++    + H  +K +NILL 
Sbjct: 139 IKLYCIEILKALNYLRKMSLTHTDLKPENILLD 171

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 43.0 bits (102), Expect = 2e-06
 Identities = 10/33 (30%), Positives = 20/33 (60%)

Query: 24  VRRYTRDILRGLDHIHSHGVAHCGIKLDNILLV 56
           +R+    I + ++ +HS+ + H  +K +NIL V
Sbjct: 120 IRKMAYQICKSVNFLHSNKLTHTDLKPENILFV 152

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 43.2 bits (102), Expect = 2e-06
 Identities = 10/50 (20%), Positives = 21/50 (42%), Gaps = 4/50 (8%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV 68
           L E       R ++  + ++    + H  IK +NI++       F  K++
Sbjct: 127 LDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI----AEDFTIKLI 172

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 43.1 bits (102), Expect = 2e-06
 Identities = 13/37 (35%), Positives = 21/37 (56%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
             E E R + + +L G+ + HS  + H  +KL+N LL
Sbjct: 113 FSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLL 149

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 43.1 bits (102), Expect = 2e-06
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           L E   R +   +L  + H H+ GV H  IK +NIL+
Sbjct: 146 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 182

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 43.1 bits (102), Expect = 2e-06
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           L E   R +   ++  + H HS GV H  IK +NIL+
Sbjct: 136 LGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILI 172

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 43.2 bits (102), Expect = 2e-06
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 11  HSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
              +S + +  + +  Y   + R +  IHS G+ H  IK  N+L+
Sbjct: 130 SFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLV 174

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 43.0 bits (102), Expect = 2e-06
 Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 1/47 (2%)

Query: 9   YNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           Y   +K  +   E     +  ++   L + H   V H  IK +N+L+
Sbjct: 102 YKELQKHGR-FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLM 147

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 42.9 bits (101), Expect = 3e-06
 Identities = 11/48 (22%), Positives = 20/48 (41%)

Query: 8   FYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
            ++          E     Y  +I  GL+ +H   + +  +K +NILL
Sbjct: 272 KFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL 319

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 42.7 bits (101), Expect = 3e-06
 Identities = 11/37 (29%), Positives = 19/37 (51%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           + E E R   R I+  + + H   + H  +K +N+LL
Sbjct: 111 MKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL 147

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 42.7 bits (101), Expect = 3e-06
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 13  KKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLV-PGKDA 61
           ++  +   E E     RDI   +  +HSH +AH  +K +N+L     KDA
Sbjct: 119 ERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDA 168

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 42.6 bits (101), Expect = 3e-06
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 9   YNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           Y   +K +K   E     Y  ++   L + HS  V H  IK +N+LL
Sbjct: 97  YRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 142

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 42.6 bits (101), Expect = 3e-06
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 13  KKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
            +  + + EH V+  T   L+ ++  H H   H  +K +NIL+
Sbjct: 93  DRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILI 135

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 42.5 bits (100), Expect = 3e-06
 Identities = 17/37 (45%), Positives = 23/37 (62%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           L E E RR  + IL G+D+ H H V H  +K +N+LL
Sbjct: 113 LDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL 149

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 42.7 bits (101), Expect = 3e-06
 Identities = 18/67 (26%), Positives = 25/67 (37%), Gaps = 7/67 (10%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLV------PGKDAGF-MAKIVARGDK 73
           E     Y R IL  L + H + + H  +K   +LL       P K  GF +A  +     
Sbjct: 129 EAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL 188

Query: 74  CLHERHG 80
               R G
Sbjct: 189 VAGGRVG 195

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 42.3 bits (100), Expect = 4e-06
 Identities = 8/43 (18%), Positives = 16/43 (37%)

Query: 13  KKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           + + +             I   ++ +HS G+ H  +K  NI  
Sbjct: 109 RCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFF 151

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 42.3 bits (100), Expect = 4e-06
 Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 9/68 (13%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLV-PGKDA-------GFMAKIVARGD 72
           E E     R ++  + H+H  GV H  +K +N+L      +        GF A++    +
Sbjct: 105 ETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGF-ARLKPPDN 163

Query: 73  KCLHERHG 80
           + L     
Sbjct: 164 QPLKTPCF 171

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 42.2 bits (100), Expect = 5e-06
 Identities = 11/37 (29%), Positives = 23/37 (62%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           + E + +R+   ++ G+ ++H  G+ H  IK +N+LL
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 138

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 41.9 bits (99), Expect = 5e-06
 Identities = 13/39 (33%), Positives = 26/39 (66%)

Query: 17  KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           + L ++++R Y  +IL+ LD+ HS G+ H  +K  N+++
Sbjct: 125 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 42.0 bits (99), Expect = 5e-06
 Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLV-PGKDA 61
           E E     + I   + ++HS  +AH  +K +N+L      +A
Sbjct: 160 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 201

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 41.8 bits (99), Expect = 6e-06
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 13  KKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           +     L    V++Y   I+ G+   HSH + H  IK +NIL+
Sbjct: 115 ELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILV 157

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 41.9 bits (99), Expect = 6e-06
 Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 10/76 (13%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLV-PGKDA-------GFMAKIVARGD 72
           E E     +D+   LD +H+ G+AH  +K +NIL   P + +             +    
Sbjct: 110 ELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDL-GSGIKLNG 168

Query: 73  KCLHERHGLLNVTGVG 88
            C       L  T  G
Sbjct: 169 DCSPISTPELL-TPCG 183

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 41.9 bits (99), Expect = 6e-06
 Identities = 11/37 (29%), Positives = 23/37 (62%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           + E + +R+   ++ G+ ++H  G+ H  IK +N+LL
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 138

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 41.5 bits (98), Expect = 6e-06
 Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKI 67
           E   + Y   +L  + ++H +G+ H  +K +N+LL   ++   + KI
Sbjct: 113 EATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS-SQEEDCLIKI 158

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 41.5 bits (98), Expect = 7e-06
 Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 10/69 (14%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLV-PGKDA--------GFMAKIVARG 71
           E E       I + ++++H+ GV H  +K  NIL V    +         GF AK +   
Sbjct: 115 EREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGF-AKQLRAE 173

Query: 72  DKCLHERHG 80
           +  L     
Sbjct: 174 NGLLMTPCY 182

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 41.5 bits (98), Expect = 7e-06
 Identities = 12/37 (32%), Positives = 23/37 (62%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           + E E RR+ + I+  +++ H H + H  +K +N+LL
Sbjct: 105 MTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLL 141

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 41.4 bits (98), Expect = 7e-06
 Identities = 15/37 (40%), Positives = 22/37 (59%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           + E E RR  + IL  +D+ H H V H  +K +N+LL
Sbjct: 108 VEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL 144

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 41.5 bits (98), Expect = 7e-06
 Identities = 11/35 (31%), Positives = 21/35 (60%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           E  V+ +  +++  LD++ +  + H  +K DNILL
Sbjct: 114 EETVKLFICELVMALDYLQNQRIIHRDMKPDNILL 148

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 41.7 bits (98), Expect = 8e-06
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 11  HSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           +  +      E     YT  I+ GL+H+H   + +  +K +N+LL
Sbjct: 278 NVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL 322

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 41.4 bits (98), Expect = 8e-06
 Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV 68
           E +  R  +D+L  + + H   VAH  +K +N L +         K++
Sbjct: 105 ESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFL-TDSPDSPLKLI 151

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 41.5 bits (98), Expect = 8e-06
 Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 7/67 (10%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLV-PGKDAGFM------AKIVARGDK 73
           E +     + IL  + H H  GV H  +K +N+LL    K A         A  V    +
Sbjct: 109 EADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 168

Query: 74  CLHERHG 80
                 G
Sbjct: 169 AWFGFAG 175

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 41.4 bits (98), Expect = 8e-06
 Identities = 14/39 (35%), Positives = 24/39 (61%)

Query: 17  KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           + L E   R Y+ +I   L+++H  G+ +  +KLDN+LL
Sbjct: 105 RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL 143

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 41.2 bits (97), Expect = 9e-06
 Identities = 14/39 (35%), Positives = 24/39 (61%)

Query: 17  KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           + L E   R Y+ +I   L+++H  G+ +  +KLDN+LL
Sbjct: 148 RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL 186

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 41.1 bits (97), Expect = 9e-06
 Identities = 8/41 (19%), Positives = 18/41 (43%)

Query: 15  SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
               +    ++ +   ++ G++  HS    H  +K  N+LL
Sbjct: 125 KNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLL 165

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 41.1 bits (97), Expect = 1e-05
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           E E R+  R +L  +  +H   + H  +K +NILL
Sbjct: 123 EKETRKIMRALLEVICALHKLNIVHRDLKPENILL 157

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 41.1 bits (97), Expect = 1e-05
 Identities = 11/37 (29%), Positives = 21/37 (56%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
               E++R  + +L GL +IH + + H  +K  N+L+
Sbjct: 121 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI 157

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 40.8 bits (96), Expect = 1e-05
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLV-PGKDA 61
           E +     + IL  + + HS+G+ H  +K +N+LL    K A
Sbjct: 127 EADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 168

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 13  KKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
            ++   L + +++ Y   +LRG+ H H H + H  +K  N+L+
Sbjct: 110 DENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI 152

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 40.7 bits (96), Expect = 1e-05
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           E   R Y  +I+  L+++HS  V +  IKL+N++L
Sbjct: 104 EERARFYGAEIVSALEYLHSRDVVYRDIKLENLML 138

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 40.9 bits (96), Expect = 1e-05
 Identities = 9/37 (24%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 21  EHEVRRYTRDILRGLDHIHSHG--VAHCGIKLDNILL 55
              V +      R + H+H     + H  +K++N+LL
Sbjct: 135 CDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL 171

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLV-PGKDA 61
           E +     + IL  + + HS+G+ H  +K +N+LL    K A
Sbjct: 104 EADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 145

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 9/43 (20%), Positives = 17/43 (39%)

Query: 13  KKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
                 L     + +   +L G+ + H   V H  +K  N+L+
Sbjct: 91  DVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI 133

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 40.3 bits (95), Expect = 2e-05
 Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 1/48 (2%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV 68
           E  V    + ++  L + HS  V H  +K +NIL           KI+
Sbjct: 123 EGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQ-DTSPHSPIKII 169

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLV-PGKDA 61
           E E     + I   + ++HS  +AH  +K +N+L      +A
Sbjct: 116 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 157

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLV-PGKDA 61
           E +     + IL  + ++H +G+ H  +K +N+L   P  DA
Sbjct: 147 ERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDA 188

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 40.5 bits (95), Expect = 2e-05
 Identities = 9/35 (25%), Positives = 18/35 (51%), Gaps = 2/35 (5%)

Query: 24  VRRYTRDILRGLDHIHSH--GVAHCGIKLDNILLV 56
            R++ + +   L  + +    + HC +K +NILL 
Sbjct: 159 TRKFAQQMCTALLFLATPELSIIHCDLKPENILLC 193

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 40.6 bits (95), Expect = 2e-05
 Identities = 15/58 (25%), Positives = 26/58 (44%)

Query: 10  NHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKI 67
           + + K    L    V+     IL G+ ++H++ V H  +K  NIL++         KI
Sbjct: 116 SKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKI 173

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 9/42 (21%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLV-PGKDA 61
           E +     + +L  + ++H +G+ H  +K +N+L + P +++
Sbjct: 105 EKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENS 146

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 40.1 bits (94), Expect = 2e-05
 Identities = 10/51 (19%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 6   VNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSH-GVAHCGIKLDNILL 55
             F+   K     +    ++   + +L    +IH+   + H  +K  NIL+
Sbjct: 135 EYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM 185

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 39.9 bits (94), Expect = 2e-05
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 17  KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           +   E   R Y  +I+  L  +H  G+ +  +KLDN+LL
Sbjct: 119 RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLL 157

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 39.9 bits (94), Expect = 2e-05
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 13  KKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
                I+  H V+ +   +LRGL + H   V H  +K  N+L+
Sbjct: 91  DDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLI 133

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           L    V+ +   +L+GL   HS  V H  +K  N+L+
Sbjct: 98  LDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI 134

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 39.9 bits (93), Expect = 3e-05
 Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 1/33 (3%)

Query: 24  VRRYTRDILRGLDHIHSH-GVAHCGIKLDNILL 55
           V++  + +L+GLD++H+   + H  IK +NILL
Sbjct: 148 VKKIIQQVLQGLDYLHTKCRIIHTDIKPENILL 180

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 39.9 bits (94), Expect = 3e-05
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 17  KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
               E     Y  +I  GL  + S G+ +  +KLDN++L
Sbjct: 116 GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML 154

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 17  KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
            I +E     Y  +I   L H+H  G+ +  +K +NI+L
Sbjct: 116 GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML 154

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 40.1 bits (94), Expect = 3e-05
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 3/59 (5%)

Query: 24  VRRYTRDILRGLDHIHSH-GVAHCGIKLDNILLVPGKDAGFMA--KIVARGDKCLHERH 79
           V++ ++ +L GLD++H   G+ H  IK +N+L+        +   KI   G+ C ++ H
Sbjct: 133 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 39.9 bits (93), Expect = 3e-05
 Identities = 14/35 (40%), Positives = 23/35 (65%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           E ++R Y  +I+ GL+H+H+  V +  +K  NILL
Sbjct: 291 EADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL 325

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 39.9 bits (94), Expect = 3e-05
 Identities = 13/43 (30%), Positives = 26/43 (60%)

Query: 13  KKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           K ++ +L    ++ Y    L+GL+++H H + H  +K +N+LL
Sbjct: 103 KDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL 145

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 40.0 bits (93), Expect = 3e-05
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 17  KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
               E     Y  +I  GL  + S G+ +  +KLDN++L
Sbjct: 437 GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML 475

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 39.6 bits (93), Expect = 3e-05
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 17  KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           +  LE   R Y  +I   L ++HS  + +  +K +NILL
Sbjct: 134 RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL 172

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 39.5 bits (93), Expect = 3e-05
 Identities = 14/39 (35%), Positives = 24/39 (61%)

Query: 17  KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
            +  E +V+ Y  ++   LDH+HS G+ +  +K +NILL
Sbjct: 121 VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL 159

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 39.5 bits (93), Expect = 4e-05
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           L       +T  IL G+ H H   + H  IK  NIL+
Sbjct: 108 LSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILI 144

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 39.5 bits (93), Expect = 4e-05
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 1   MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILL 55
           M +S   FY       + + E  + +    I++ L+H+HS   V H  +K  N+L+
Sbjct: 88  MDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLI 143

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 13  KKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
             +   +    ++ Y   +L+GL   HSH V H  +K  N+L+
Sbjct: 94  ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 136

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 39.2 bits (92), Expect = 4e-05
 Identities = 8/39 (20%), Positives = 16/39 (41%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVP 57
           +          D  + L+  H +G+ H  +K  NI++  
Sbjct: 113 MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 39.1 bits (92), Expect = 5e-05
 Identities = 14/40 (35%), Positives = 20/40 (50%)

Query: 16  AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
                      Y  +I+ GL  +HS G+ +  +KLDNILL
Sbjct: 112 CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL 151

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 39.1 bits (92), Expect = 5e-05
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 13  KKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
             + + L  + V+ +   +L+GL   H + + H  +K  N+L+
Sbjct: 99  GNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLI 141

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 38.9 bits (91), Expect = 5e-05
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           E E R   R +L  +  +H++ + H  +K +NILL
Sbjct: 199 EKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL 233

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 14/37 (37%), Positives = 21/37 (56%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           +    ++     +LRGLD +HSH V H  +K  NIL+
Sbjct: 117 VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV 153

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 13  KKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           K     L    ++   R  LRGLD +H++ + H  +K +NIL+
Sbjct: 111 KAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV 153

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 38.9 bits (91), Expect = 6e-05
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           E   R YT +++  LD IHS G  H  +K DN+LL
Sbjct: 167 EKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL 201

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 38.8 bits (91), Expect = 7e-05
 Identities = 17/35 (48%), Positives = 25/35 (71%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           EHEV+ Y  +I+  L+H+H  G+ +  IKL+NILL
Sbjct: 158 EHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL 192

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 38.8 bits (91), Expect = 7e-05
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLV-PGKDA 61
           EH+  R  + +  G+ ++H H + H  +K +NILL    KD 
Sbjct: 120 EHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDC 161

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 38.7 bits (90), Expect = 8e-05
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 14  KSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           ++   L E  ++    ++L G+ ++HS G+ H  +K  N L+
Sbjct: 148 RTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLV 189

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 38.1 bits (89), Expect = 1e-04
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 20  LEHEVRRY-TRDILRGLDHIHSHGVAHCGIKLDNILL 55
           L+HE   Y    +L G+ H+HS G+ H  +K  NI++
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 160

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 4/56 (7%)

Query: 1   MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILL 55
           M +         K+    + E  + + T  I++ L ++   HGV H  +K  NILL
Sbjct: 106 MGTCAEKLK---KRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL 158

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 11/36 (30%), Positives = 15/36 (41%)

Query: 22  HEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVP 57
                  R I   LD  H+ G  H  +K +NIL+  
Sbjct: 134 PRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSA 169

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 36.9 bits (86), Expect = 3e-04
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 14  KSAKILLEHEVRRY-TRDILRGLDHIHSHGVAHCGIKLDNILL 55
              +I++  +  +Y    IL GL  +H  GV H  +   NILL
Sbjct: 125 HDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL 167

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 36.9 bits (86), Expect = 3e-04
 Identities = 9/25 (36%), Positives = 17/25 (68%)

Query: 31  ILRGLDHIHSHGVAHCGIKLDNILL 55
           +L+GL +IH+ G+ H  +K  N+ +
Sbjct: 137 MLKGLRYIHAAGIIHRDLKPGNLAV 161

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 36.6 bits (85), Expect = 4e-04
 Identities = 9/59 (15%), Positives = 14/59 (23%), Gaps = 5/59 (8%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVP-GK----DAGFMAKIVARGD 72
                  R  + +    D  H  GVA        + +   G         M     + D
Sbjct: 126 PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPATMPDANPQDD 184

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 36.4 bits (84), Expect = 4e-04
 Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 14  KSAKILLEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILL 55
           K A  + E  + + +  +++GL ++   H + H  +K  NIL+
Sbjct: 123 KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 165

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 36.2 bits (84), Expect = 5e-04
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 31  ILRGLDHIHSHGVAHCGIKLDNILL 55
           ILRGL +IHS  + H  +K  N+ +
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAV 165

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 36.1 bits (84), Expect = 5e-04
 Identities = 14/25 (56%), Positives = 17/25 (68%)

Query: 31  ILRGLDHIHSHGVAHCGIKLDNILL 55
           ILRGL +IHS  V H  +K  N+LL
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLL 161

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 36.1 bits (84), Expect = 5e-04
 Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 4/64 (6%)

Query: 4   SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGF 63
            G + Y+H   S       ++    R   RG+D++H+  + H  +K +NI L        
Sbjct: 102 EGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL----HEDN 157

Query: 64  MAKI 67
             KI
Sbjct: 158 TVKI 161

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 36.1 bits (84), Expect = 5e-04
 Identities = 13/51 (25%), Positives = 17/51 (33%), Gaps = 5/51 (9%)

Query: 10  NHSKKSAKILLEHEVRRYTRDILRGLDHIHS-----HGVAHCGIKLDNILL 55
               K  + L E  V R    +   L   H      H V H  +K  N+ L
Sbjct: 99  TKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 36.1 bits (84), Expect = 6e-04
 Identities = 8/25 (32%), Positives = 13/25 (52%)

Query: 31  ILRGLDHIHSHGVAHCGIKLDNILL 55
            LR +  +H   V H  +K  N+L+
Sbjct: 121 TLRAVKVLHGSNVIHRDLKPSNLLI 145

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 35.9 bits (83), Expect = 7e-04
 Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 17  KILLEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILL 55
           ++  E   R Y  +I+  LD++HS   V +  +KL+N++L
Sbjct: 243 RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 282

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 35.7 bits (83), Expect = 7e-04
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 31  ILRGLDHIHSHGVAHCGIKLDNILL 55
           +LRGL +IHS  V H  +K  N+ +
Sbjct: 129 LLRGLKYIHSANVLHRDLKPANLFI 153

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 35.7 bits (83), Expect = 7e-04
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 31  ILRGLDHIHSHGVAHCGIKLDNILL 55
           +L+GL +IHS GV H  +K  N+ +
Sbjct: 135 MLKGLKYIHSAGVVHRDLKPGNLAV 159

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 35.7 bits (83), Expect = 7e-04
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 14  KSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           +      E   R YT +I+  L+++H  G+ H  +K +NILL
Sbjct: 122 RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 163

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 35.9 bits (83), Expect = 7e-04
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 31  ILRGLDHIHSHGVAHCGIKLDNILL 55
           +L G + IH  G+ H  +K  N LL
Sbjct: 138 LLLGENFIHESGIIHRDLKPANCLL 162

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 35.8 bits (83), Expect = 9e-04
 Identities = 9/25 (36%), Positives = 17/25 (68%)

Query: 31  ILRGLDHIHSHGVAHCGIKLDNILL 55
           +++ + ++HS G+ H  +K  NILL
Sbjct: 118 LIKVIKYLHSGGLLHRDMKPSNILL 142

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	97
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.91
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.9
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.89
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.89
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.89
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.88
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.88
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.88
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.86
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.86
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.85
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.85
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.85
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.85
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.84
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.84
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.83
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.81
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.81
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.81
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.77
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.76
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.76
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.75
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.75
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.75
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.74
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.74
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.74
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.74
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.74
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.74
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.73
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.73
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.73
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.73
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.73
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.73
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.73
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.73
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.73
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.72
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.72
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.72
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.72
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.71
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.71
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.71
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.71
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.71
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.71
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.71
3niz_A	311	Rhodanese family protein; structural genomics, str	99.71
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.71
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.7
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.7
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.7
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.7
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.7
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.7
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.7
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.7
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.69
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.69
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.69
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.69
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.69
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.69
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.69
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.69
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.68
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.68
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.68
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.68
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.68
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.68
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.68
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.68
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.68
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.68
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.68
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.68
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.68
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.68
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.68
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.67
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.67
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.67
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.67
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.67
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.67
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.67
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.67
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.67
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.67
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.67
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.67
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.67
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.67
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.67
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.67
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.66
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.66
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.66
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.66
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.66
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.66
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.66
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.66
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.66
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.66
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.66
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.66
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.65
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.65
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.65
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.65
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.65
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.65
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.65
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.65
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.65
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.65
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.65
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.65
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.65
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.65
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.64
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.64
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.64
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.64
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.64
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.64
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.64
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.64
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.64
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.64
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.64
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.64
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.64
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.64
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.64
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.64
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.63
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.63
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.63
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.63
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.63
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.63
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.63
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.63
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.63
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.63
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.63
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.63
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.63
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.62
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.62
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.62
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.62
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.62
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.62
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.62
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.62
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.62
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.62
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.62
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.62
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.62
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.61
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.61
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.61
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.61
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.61
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.61
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.61
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.61
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.61
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.61
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.61
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.61
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.61
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.61
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.61
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.61
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.6
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.6
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.6
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.6
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.6
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.6
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.6
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.6
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.6
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.6
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.59
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.59
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.59
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.59
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.59
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.59
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.59
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.59
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.59
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.59
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.59
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.59
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.59
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.59
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.58
3bhy_A	283	Death-associated protein kinase 3; death associate	99.58
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.58
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.58
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.58
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.57
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.57
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.57
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.57
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.57
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.57
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.57
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.57
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.56
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.56
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.56
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.56
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.56
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.56
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.55
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.55
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.54
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.54
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.54
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.53
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.53
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.53
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.52
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.52
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.52
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.51
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.51
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.51
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.51
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.51
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.51
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.51
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.5
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.5
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.48
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.47
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.47
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.37
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.31
3uqc_A	286	Probable conserved transmembrane protein; structur	99.3
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.65
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	97.57
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	97.56
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.52
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	96.74
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	96.65
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	96.47
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	95.8
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	95.06
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	94.92
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	94.59
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	94.29
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	94.17
3ats_A	357	Putative uncharacterized protein; hypothetical pro	93.85
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	93.62
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	92.33
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	91.15
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	90.59
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	88.77
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	88.23
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	86.83
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	85.69
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	85.37
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	83.66
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	83.22
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	82.59

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.91  E-value=5.5e-24  Score=130.47  Aligned_cols=87  Identities=23%  Similarity=0.294  Sum_probs=72.7

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||+|.+++.+. +.+++..++.++.|++.|+.|+|+++|+|||+||+||++    +.+..+||+|||+|+........
T Consensus       114 ~~gG~L~~~i~~~-~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl----~~~g~vKl~DFGla~~~~~~~~~  188 (311)
T 4aw0_A          114 AKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQ  188 (311)
T ss_dssp             CTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTSCEEECCCTTCEECCTTTTC
T ss_pred             CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEE----cCCCCEEEEEcCCceecCCCCCc
Confidence            4589999999876 569999999999999999999999999999999999999    77889999999999987654333


Q ss_pred             --eeeccccCcccccc
Q 038072           83 --NVTGVGEGQVADIS   96 (97)
Q Consensus        83 --~~~~~~~~~~~~~~   96 (97)
                        ..+.+||  +.||+
T Consensus       189 ~~~~~~~GT--p~YmA  202 (311)
T 4aw0_A          189 ARANSFVGT--AQYVS  202 (311)
T ss_dssp             CCBCCCCSC--GGGCC
T ss_pred             ccccCcccC--cccCC
Confidence              2344554  45553

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.90  E-value=2.7e-23  Score=127.26  Aligned_cols=90  Identities=21%  Similarity=0.316  Sum_probs=69.1

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||+|.+++...+..+++..+..++.|++.|+.|+|+++++|||+|++||++    +.+..+||+|||+|+........
T Consensus       113 ~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl----~~~~~~Ki~DFGla~~~~~~~~~  188 (307)
T 3omv_A          113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFL----HEGLTVKIGDFGLATVKSRWSGS  188 (307)
T ss_dssp             CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEE----ETTEEEEECCCSSCBC-------
T ss_pred             CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEE----CCCCcEEEeeccCceecccCCcc
Confidence            46899999998766779999999999999999999999999999999999999    77889999999999876543332


Q ss_pred             eeeccccCcccccc
Q 038072           83 NVTGVGEGQVADIS   96 (97)
Q Consensus        83 ~~~~~~~~~~~~~~   96 (97)
                      .......|++.||+
T Consensus       189 ~~~~~~~GT~~ymA  202 (307)
T 3omv_A          189 QQVEQPTGSVLWMA  202 (307)
T ss_dssp             -----CCCCTTSCC
T ss_pred             eeecccccCCCccC
Confidence            22222334555664

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.89  E-value=2.7e-23  Score=127.15  Aligned_cols=87  Identities=25%  Similarity=0.318  Sum_probs=70.6

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||+|.+++.+. +.+++..+..++.|++.|+.|+|+++++|||+||+||++    +.+..+||+|||+|+........
T Consensus       108 ~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl----~~~g~vKl~DFGla~~~~~~~~~  182 (304)
T 3ubd_A          108 LRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL----DEEGHIKLTDFGLSKESIDHEKK  182 (304)
T ss_dssp             CTTCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE----CTTSCEEEESSEEEEC-----CC
T ss_pred             CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEE----cCCCCEEecccccceeccCCCcc
Confidence            4689999999876 559999999999999999999999999999999999999    77888999999999876655444


Q ss_pred             eeeccccCcccccc
Q 038072           83 NVTGVGEGQVADIS   96 (97)
Q Consensus        83 ~~~~~~~~~~~~~~   96 (97)
                      ..+.+||  +.||+
T Consensus       183 ~~~~~GT--~~YmA  194 (304)
T 3ubd_A          183 AYSFCGT--VEYMA  194 (304)
T ss_dssp             CCSCCCC--GGGCC
T ss_pred             ccccccC--cccCC
Confidence            4455554  45554

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.89  E-value=3.4e-23  Score=125.22  Aligned_cols=86  Identities=22%  Similarity=0.367  Sum_probs=64.9

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      ||..+|+|.+++.+. +.+++..+..++.|++.|+.|+|+++++|||+||+||++    +.+..+||+|||+|+......
T Consensus        92 mEy~~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl----~~~~~vkl~DFGla~~~~~~~  166 (275)
T 3hyh_A           92 IEYAGNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL----DEHLNVKIADFGLSNIMTDGN  166 (275)
T ss_dssp             EECCCEEHHHHHHHS-CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE----CTTCCEEECCSSCC-------
T ss_pred             EeCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEE----CCCCCEEEeecCCCeecCCCC
Confidence            567789999999876 559999999999999999999999999999999999999    778889999999998765433


Q ss_pred             cceeeccccCcc
Q 038072           81 LLNVTGVGEGQV   92 (97)
Q Consensus        81 ~~~~~~~~~~~~   92 (97)
                       ...+.+||+.|
T Consensus       167 -~~~~~~GT~~Y  177 (275)
T 3hyh_A          167 -FLKTSCGSPNY  177 (275)
T ss_dssp             ---------CTT
T ss_pred             -ccCCeeECccc
Confidence             23344555443

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.89  E-value=6e-23  Score=127.40  Aligned_cols=84  Identities=21%  Similarity=0.184  Sum_probs=72.8

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||+|.+++..  +.+++..+..++.|++.|+.|+|+++|+|||+|++||++    +.+..+||+|||+|+........
T Consensus       153 ~~gg~L~~~l~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl----~~~g~vKl~DFGla~~~~~~~~~  226 (346)
T 4fih_A          153 LEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL----THDGRVKLSDFGFCAQVSKEVPR  226 (346)
T ss_dssp             CTTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTCCEEECCCTTCEECCSSSCC
T ss_pred             CCCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEE----CCCCCEEEecCcCceecCCCCCc
Confidence            458999999976  459999999999999999999999999999999999999    77889999999999988766555


Q ss_pred             eeeccccCcc
Q 038072           83 NVTGVGEGQV   92 (97)
Q Consensus        83 ~~~~~~~~~~   92 (97)
                      ..+.+||+.|
T Consensus       227 ~~~~~GTp~Y  236 (346)
T 4fih_A          227 RKSLVGTPYW  236 (346)
T ss_dssp             BCCCCSCGGG
T ss_pred             ccccccCcCc
Confidence            5566665544

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.88  E-value=1.5e-22  Score=128.34  Aligned_cols=84  Identities=21%  Similarity=0.184  Sum_probs=73.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||+|.+++..  +.+++..+..++.|++.||.|+|+++|+|||+|++||++    +.+..+||+|||+|+........
T Consensus       230 ~~gG~L~~~i~~--~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl----~~~g~vKl~DFGla~~~~~~~~~  303 (423)
T 4fie_A          230 LEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL----THDGRVKLSDFGFCAQVSKEVPR  303 (423)
T ss_dssp             CTTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEE----CTTCCEEECCCTTCEECCSSCCC
T ss_pred             CCCCcHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE----cCCCCEEEecCccceECCCCCcc
Confidence            458999999976  459999999999999999999999999999999999999    77788999999999988766555


Q ss_pred             eeeccccCcc
Q 038072           83 NVTGVGEGQV   92 (97)
Q Consensus        83 ~~~~~~~~~~   92 (97)
                      ..+.+||+.|
T Consensus       304 ~~~~~GTp~Y  313 (423)
T 4fie_A          304 RKSLVGTPYW  313 (423)
T ss_dssp             BCCCEECTTT
T ss_pred             ccccccCcCc
Confidence            5666776554

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.88  E-value=4.5e-23  Score=128.12  Aligned_cols=88  Identities=18%  Similarity=0.235  Sum_probs=72.1

Q ss_pred             CCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCc
Q 038072            3 SSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGL   81 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~   81 (97)
                      +.||+|.+++...+ ..+++..+..++.|++.|+.|+|+++|+|||+||+||++    +.+..+||+|||+|+.......
T Consensus       105 ~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl----~~~g~vKl~DFGla~~~~~~~~  180 (350)
T 4b9d_A          105 CEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL----TKDGTVQLGDFGIARVLNSTVE  180 (350)
T ss_dssp             CTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEE----CTTCCEEECSTTEESCCCHHHH
T ss_pred             CCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE----CCCCCEEEcccccceeecCCcc
Confidence            45899999997653 347999999999999999999999999999999999999    7778899999999987765443


Q ss_pred             ceeeccccCcccccc
Q 038072           82 LNVTGVGEGQVADIS   96 (97)
Q Consensus        82 ~~~~~~~~~~~~~~~   96 (97)
                      ...+.+||+  .||+
T Consensus       181 ~~~~~~GT~--~YmA  193 (350)
T 4b9d_A          181 LARACIGTP--YYLS  193 (350)
T ss_dssp             HHHHHHSCC--TTCC
T ss_pred             cccccCCCc--cccC
Confidence            444455554  4543

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.88  E-value=1.8e-22  Score=124.84  Aligned_cols=72  Identities=24%  Similarity=0.285  Sum_probs=62.8

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCc-eEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGF-MAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~-~~~i~dfg~a~~~~~~   79 (97)
                      +.||+|.+++++. +.+++..+..++.|++.|+.|+|+++|+|||+||+||++    +.+. .+||+|||+|+.....
T Consensus       132 ~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl----~~~g~~vKl~DFGla~~~~~~  204 (336)
T 4g3f_A          132 LEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL----SSDGSRAALCDFGHALCLQPD  204 (336)
T ss_dssp             CTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEE----CTTSCCEEECCCTTCEEC---
T ss_pred             cCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE----eCCCCEEEEeeCCCCeEccCC
Confidence            4589999999876 569999999999999999999999999999999999999    5444 6999999999987653

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.86  E-value=1.1e-21  Score=119.85  Aligned_cols=90  Identities=13%  Similarity=0.096  Sum_probs=72.3

Q ss_pred             CCCCCHHHHHhhcc------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeec
Q 038072            3 SSGVNFYNHSKKSA------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVAR   70 (97)
Q Consensus         3 ~~g~~l~~~l~~~~------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~df   70 (97)
                      +.||+|.+++....            ..+++..+..++.|++.|+.|+|+++++|||+|++||++    +.+..+||+||
T Consensus        97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl----~~~~~~Ki~DF  172 (299)
T 4asz_A           97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV----GENLLVKIGDF  172 (299)
T ss_dssp             CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGCEEECCC
T ss_pred             CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEE----CCCCcEEECCc
Confidence            46899999997632            348999999999999999999999999999999999999    77889999999


Q ss_pred             CceeeeccCCcceeeccccCcccccc
Q 038072           71 GDKCLHERHGLLNVTGVGEGQVADIS   96 (97)
Q Consensus        71 g~a~~~~~~~~~~~~~~~~~~~~~~~   96 (97)
                      |+|+..........+....+++.||+
T Consensus       173 Gla~~~~~~~~~~~~~~~~gt~~ymA  198 (299)
T 4asz_A          173 GMSRDVYSTDYYRVGGHTMLPIRWMP  198 (299)
T ss_dssp             SCHHHHTGGGCEEETTTEEECGGGCC
T ss_pred             ccceecCCCCceeecCceecChhhcC
Confidence            99987655443333322334566664

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.86  E-value=2e-21  Score=118.28  Aligned_cols=86  Identities=22%  Similarity=0.303  Sum_probs=69.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC--ccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHG--VAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~--~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      +.||+|.+++.+. +.+++..+..++.|++.|+.|+|+++  |+|||+||+||++.   ..+..+||+|||+|+....  
T Consensus       111 ~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~---~~~g~vKl~DFGla~~~~~--  184 (290)
T 3fpq_A          111 MTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT---GPTGSVKIGDLGLATLKRA--  184 (290)
T ss_dssp             CCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEES---STTSCEEECCTTGGGGCCT--
T ss_pred             CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEE---CCCCCEEEEeCcCCEeCCC--
Confidence            4689999999876 55999999999999999999999998  99999999999993   1356899999999975433  


Q ss_pred             cceeeccccCcccccc
Q 038072           81 LLNVTGVGEGQVADIS   96 (97)
Q Consensus        81 ~~~~~~~~~~~~~~~~   96 (97)
                      ....+.+||+  .||+
T Consensus       185 ~~~~~~~GTp--~YmA  198 (290)
T 3fpq_A          185 SFAKAVIGTP--EFMA  198 (290)
T ss_dssp             TSBEESCSSC--CCCC
T ss_pred             CccCCcccCc--cccC
Confidence            2234455554  5554

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.85  E-value=1.6e-21  Score=121.40  Aligned_cols=90  Identities=16%  Similarity=0.101  Sum_probs=73.4

Q ss_pred             CCCCCHHHHHhhcc---------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEE
Q 038072            3 SSGVNFYNHSKKSA---------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKI   67 (97)
Q Consensus         3 ~~g~~l~~~l~~~~---------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i   67 (97)
                      +.||+|.++++...               ..+++..+..++.|++.|+.|+|+++++|||+|++||++    +.+..+||
T Consensus       151 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl----~~~~~vKi  226 (353)
T 4ase_A          151 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL----SEKNVVKI  226 (353)
T ss_dssp             CTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGCEEE
T ss_pred             CCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceee----CCCCCEEE
Confidence            46899999997532               238999999999999999999999999999999999999    77889999


Q ss_pred             eecCceeeeccCCcceeeccccCcccccc
Q 038072           68 VARGDKCLHERHGLLNVTGVGEGQVADIS   96 (97)
Q Consensus        68 ~dfg~a~~~~~~~~~~~~~~~~~~~~~~~   96 (97)
                      +|||+|+..........+....+++.||+
T Consensus       227 ~DFGlar~~~~~~~~~~~~~~~gt~~ymA  255 (353)
T 4ase_A          227 CDFGLARDIYKDPDYVRKGDARLPLKWMA  255 (353)
T ss_dssp             CCCGGGSCTTTCTTSEEETTEEECGGGCC
T ss_pred             CcchhhhhcccCCCceeeccccccccccC
Confidence            99999987765544443433445666765

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.85  E-value=4.9e-21  Score=116.96  Aligned_cols=73  Identities=15%  Similarity=0.145  Sum_probs=59.0

Q ss_pred             CCCCCHHHHHhhccc--ccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKSAK--ILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~--~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.||+|.+++.....  ..++..+..++.|++.|+.|+|+++++|||+||+||++    +.+..+||+|||+|+.....
T Consensus        97 ~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl----~~~~~vKl~DFGla~~~~~~  171 (299)
T 4g31_A           97 CRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFF----TMDDVVKVGDFGLVTAMDQD  171 (299)
T ss_dssp             CCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTCCEEECCCCCC------
T ss_pred             CCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEE----CCCCcEEEccCccceecCCC
Confidence            458999999987532  24567788999999999999999999999999999999    77788999999999876653

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.85  E-value=4e-21  Score=117.75  Aligned_cols=90  Identities=16%  Similarity=0.092  Sum_probs=72.1

Q ss_pred             CCCCCHHHHHhhc---------------ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEE
Q 038072            3 SSGVNFYNHSKKS---------------AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKI   67 (97)
Q Consensus         3 ~~g~~l~~~l~~~---------------~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i   67 (97)
                      +.+|+|.+++...               +..+++..+..++.|++.|+.|+|+++++|||+|++||++    +.+..+||
T Consensus       111 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl----~~~~~~Ki  186 (308)
T 4gt4_A          111 CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV----YDKLNVKI  186 (308)
T ss_dssp             CSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGCEEE
T ss_pred             CCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEE----CCCCCEEE
Confidence            4689999999642               2348999999999999999999999999999999999999    77889999


Q ss_pred             eecCceeeeccCCcceeeccccCcccccc
Q 038072           68 VARGDKCLHERHGLLNVTGVGEGQVADIS   96 (97)
Q Consensus        68 ~dfg~a~~~~~~~~~~~~~~~~~~~~~~~   96 (97)
                      +|||+++..........+....+++.||+
T Consensus       187 ~DFGlar~~~~~~~~~~~~~~~gt~~ymA  215 (308)
T 4gt4_A          187 SDLGLFREVYAADYYKLLGNSLLPIRWMA  215 (308)
T ss_dssp             CCSCCBCGGGGGGCBCSSSSSCBCGGGCC
T ss_pred             CCcccceeccCCCceeEecccccCCcccC
Confidence            99999987655443332323345566764

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.85  E-value=4.6e-21  Score=118.38  Aligned_cols=90  Identities=12%  Similarity=0.043  Sum_probs=63.7

Q ss_pred             CCCCCHHHHHhhcc--------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEe
Q 038072            3 SSGVNFYNHSKKSA--------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV   68 (97)
Q Consensus         3 ~~g~~l~~~l~~~~--------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~   68 (97)
                      +.||+|.+++....              +.+++..+..++.|++.|+.|+|+++++|||+|++||++    +.+..+||+
T Consensus       125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl----~~~~~~Ki~  200 (329)
T 4aoj_A          125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV----GQGLVVKIG  200 (329)
T ss_dssp             CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----ETTTEEEEC
T ss_pred             CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEE----CCCCcEEEc
Confidence            46899999987531              348999999999999999999999999999999999999    778899999


Q ss_pred             ecCceeeeccCCcceeeccccCcccccc
Q 038072           69 ARGDKCLHERHGLLNVTGVGEGQVADIS   96 (97)
Q Consensus        69 dfg~a~~~~~~~~~~~~~~~~~~~~~~~   96 (97)
                      |||+++..........+....+++.||+
T Consensus       201 DFGla~~~~~~~~~~~~~~~~gt~~ymA  228 (329)
T 4aoj_A          201 DFGMSRDIYSTDYYRVGGRTMLPIRWMP  228 (329)
T ss_dssp             CCC----------------CCCCGGGCC
T ss_pred             ccccceeccCCCcceecCcccccccccC
Confidence            9999987655443332222334566664

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.84  E-value=7.2e-21  Score=125.95  Aligned_cols=85  Identities=26%  Similarity=0.381  Sum_probs=71.9

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||+|.+++.+. +.+++..++.++.|++.|+.|+|+++|+|||+||+||++    +.+..+||+|||+|+......  
T Consensus       274 ~~GGdL~~~l~~~-~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILl----d~~G~vKL~DFGlA~~~~~~~--  346 (689)
T 3v5w_A          274 MNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL----DEHGHVRISDLGLACDFSKKK--  346 (689)
T ss_dssp             CCSCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECSSCC--
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEE----eCCCCEEecccceeeecCCCC--
Confidence            4689999999876 569999999999999999999999999999999999999    778899999999998765432  


Q ss_pred             eeeccccCcccccc
Q 038072           83 NVTGVGEGQVADIS   96 (97)
Q Consensus        83 ~~~~~~~~~~~~~~   96 (97)
                      ..+.+||+  .||+
T Consensus       347 ~~t~~GTp--~YmA  358 (689)
T 3v5w_A          347 PHASVGTH--GYMA  358 (689)
T ss_dssp             CCSCCSCG--GGCC
T ss_pred             CCCccCCc--CccC
Confidence            33456554  4553

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.84  E-value=4.3e-21  Score=121.01  Aligned_cols=73  Identities=25%  Similarity=0.232  Sum_probs=65.3

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+..+|+|.+++... +.+++..++.++.|++.|+.|+|+++|+|||+||+||++    +.+..+||+|||+|+....
T Consensus       138 mE~~~g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~----~~~~~~Ki~DFGla~~~~~  210 (398)
T 4b99_A          138 LDLMESDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV----NENCELKIGDFGMARGLCT  210 (398)
T ss_dssp             EECCSEEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTCCEEECCCTTCBCC--
T ss_pred             EeCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCcccccc----CCCCCEEEeecceeeeccc
Confidence            566788999999876 569999999999999999999999999999999999999    7788999999999987643

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.83  E-value=3.7e-20  Score=113.18  Aligned_cols=88  Identities=16%  Similarity=0.158  Sum_probs=69.9

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc--------CccccCCCCCcEEEeeCCCCCceEEEeecCcee
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSH--------GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKC   74 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~--------~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~   74 (97)
                      +.||+|.++++.  ..++++.+..++.|++.|+.|+|++        +++|||+|++||++    +.+..+||+|||+|+
T Consensus        83 ~~~gsL~~~l~~--~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl----~~~~~~Ki~DFGla~  156 (303)
T 3hmm_A           83 HEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV----KKNGTCCIADLGLAV  156 (303)
T ss_dssp             CTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEE----CTTSCEEECCCTTCE
T ss_pred             CCCCcHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEE----CCCCCEEEEeCCCCc
Confidence            357999999987  4589999999999999999999987        89999999999999    778899999999999


Q ss_pred             eeccCCccee--eccccCcccccc
Q 038072           75 LHERHGLLNV--TGVGEGQVADIS   96 (97)
Q Consensus        75 ~~~~~~~~~~--~~~~~~~~~~~~   96 (97)
                      ..........  .....+++.||+
T Consensus       157 ~~~~~~~~~~~~~~~~~GT~~ymA  180 (303)
T 3hmm_A          157 RHDSATDTIDIAPNHRVGTKRYMA  180 (303)
T ss_dssp             EEETTTTEESCC-----CCGGGCC
T ss_pred             cccCCCCceeeecccccccccccC
Confidence            8765443321  112235566664

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.81  E-value=2e-20  Score=122.34  Aligned_cols=80  Identities=15%  Similarity=0.144  Sum_probs=63.9

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.|++|.+++... +.+++.   .++.|++.||.|+|+++|+|||+||+||++    +.+..+||+|||+|+........
T Consensus       324 v~G~~L~d~i~~~-~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL----~~dg~vKL~DFGlAr~~~~~~~~  395 (569)
T 4azs_A          324 LPGRLLSDMLAAG-EEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMV----DARQHARLIDFGSIVTTPQDCSW  395 (569)
T ss_dssp             CCSEEHHHHHHTT-CCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEE----CTTSCEEECCCTTEESCC---CC
T ss_pred             CCCCcHHHHHHhC-CCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEE----CCCCCEEEeecccCeeCCCCCcc
Confidence            4689999999886 557765   478999999999999999999999999999    77889999999999876654444


Q ss_pred             eeeccccC
Q 038072           83 NVTGVGEG   90 (97)
Q Consensus        83 ~~~~~~~~   90 (97)
                      ..+.+||+
T Consensus       396 ~~t~vGTp  403 (569)
T 4azs_A          396 PTNLVQSF  403 (569)
T ss_dssp             SHHHHHHH
T ss_pred             ccCceech
Confidence            44445543

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.81  E-value=1.3e-19  Score=113.14  Aligned_cols=69  Identities=23%  Similarity=0.259  Sum_probs=60.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++..    +++.+++.++.|++.|+.|+|+++|+|||+||+||++.   .....+||+|||+|+....
T Consensus       102 ~~g~~L~~~~~~----l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~---~~~~~~kl~DFGla~~~~~  170 (361)
T 4f9c_A          102 LEHESFLDILNS----LSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYN---RRLKKYALVDFGLAQGTHD  170 (361)
T ss_dssp             CCCCCHHHHHTT----CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---TTTTEEEECCCTTCEECTT
T ss_pred             CCcccHHHHHcC----CCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEe---CCCCeEEECcCCCCcccCC
Confidence            357999999843    89999999999999999999999999999999999994   2236899999999986543

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.81  E-value=1.3e-19  Score=118.57  Aligned_cols=86  Identities=20%  Similarity=0.324  Sum_probs=70.5

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||+|.+++....+.+++..+..++.|++.|+.|||+++++|||+|++||++..  .....+||+|||+|+....... 
T Consensus       236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~--~~~~~vKl~DFG~a~~~~~~~~-  312 (573)
T 3uto_A          236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT--KRSNELKLIDFGLTAHLDPKQS-  312 (573)
T ss_dssp             CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS--SSCCCEEECCCSSCEECCTTSE-
T ss_pred             cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccC--CCCCCEEEeeccceeEccCCCc-
Confidence            4689999999765566999999999999999999999999999999999999942  1246799999999998766443 


Q ss_pred             eeeccccCc
Q 038072           83 NVTGVGEGQ   91 (97)
Q Consensus        83 ~~~~~~~~~   91 (97)
                      ..+.+||+.
T Consensus       313 ~~~~~GT~~  321 (573)
T 3uto_A          313 VKVTTGTAE  321 (573)
T ss_dssp             EEEECSSGG
T ss_pred             eeeeEECcc
Confidence            334455544

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.77  E-value=2.6e-18  Score=106.75  Aligned_cols=76  Identities=20%  Similarity=0.224  Sum_probs=63.0

Q ss_pred             CCCCCHHHHHhh----cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeC-------CCCCceEEEeecC
Q 038072            3 SSGVNFYNHSKK----SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPG-------KDAGFMAKIVARG   71 (97)
Q Consensus         3 ~~g~~l~~~l~~----~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~-------~~~~~~~~i~dfg   71 (97)
                      +.||+|.+++..    ....+++..+..++.|++.|+.|+|+++++|+|+|++||++...       +.....+||+|||
T Consensus       149 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG  228 (365)
T 3e7e_A          149 YSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLG  228 (365)
T ss_dssp             CCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCT
T ss_pred             cCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCc
Confidence            458999999975    23459999999999999999999999999999999999999320       0116889999999


Q ss_pred             ceeeecc
Q 038072           72 DKCLHER   78 (97)
Q Consensus        72 ~a~~~~~   78 (97)
                      +++....
T Consensus       229 ~a~~~~~  235 (365)
T 3e7e_A          229 QSIDMKL  235 (365)
T ss_dssp             TCEEGGG
T ss_pred             hhhhhhc
Confidence            9987553

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.76  E-value=2.8e-18  Score=106.68  Aligned_cols=85  Identities=27%  Similarity=0.317  Sum_probs=66.7

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.|++|.+++... +.+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..++|+|||+++........
T Consensus       106 ~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl----~~~g~ikL~DFG~a~~~~~~~~~  180 (353)
T 3txo_A          106 VNGGDLMFHIQKS-RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLL----DHEGHCKLADFGMCKEGICNGVT  180 (353)
T ss_dssp             CCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTSCEEECCCTTCBCSCC----
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEE----CCCCCEEEccccceeecccCCcc
Confidence            4578999999876 459999999999999999999999999999999999999    77888999999999865544444


Q ss_pred             eeeccccCcc
Q 038072           83 NVTGVGEGQV   92 (97)
Q Consensus        83 ~~~~~~~~~~   92 (97)
                      ..+.+|++.|
T Consensus       181 ~~~~~gt~~y  190 (353)
T 3txo_A          181 TATFCGTPDY  190 (353)
T ss_dssp             -----CCGGG
T ss_pred             ccccCCCcCe
Confidence            4455555443

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.76  E-value=4.6e-18  Score=107.20  Aligned_cols=85  Identities=27%  Similarity=0.314  Sum_probs=71.6

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||+|.+++... +.+++..++.++.|++.|+.|+|+++++|||+|++||++    +.+..++|+|||+++........
T Consensus       135 ~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl----~~~g~ikL~DFGla~~~~~~~~~  209 (396)
T 4dc2_A          135 VNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL----DSEGHIKLTDYGMCKEGLRPGDT  209 (396)
T ss_dssp             CTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTSCEEECCCTTCBCCCCTTCC
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE----CCCCCEEEeecceeeecccCCCc
Confidence            4588999999876 459999999999999999999999999999999999999    77889999999999875554444


Q ss_pred             eeeccccCcc
Q 038072           83 NVTGVGEGQV   92 (97)
Q Consensus        83 ~~~~~~~~~~   92 (97)
                      ..+.+|++.|
T Consensus       210 ~~~~~gt~~Y  219 (396)
T 4dc2_A          210 TSTFCGTPNY  219 (396)
T ss_dssp             BCCCCBCGGG
T ss_pred             cccccCCccc
Confidence            4555665443

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.75  E-value=8.4e-18  Score=107.13  Aligned_cols=74  Identities=24%  Similarity=0.271  Sum_probs=66.6

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      +.||+|.+++....+.+++..++.++.|++.|+.|+|+.+++|||+|++||++    +.+..+||+|||+++......
T Consensus       156 ~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl----~~~g~vkL~DFGla~~~~~~~  229 (437)
T 4aw2_A          156 YVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM----DMNGHIRLADFGSCLKLMEDG  229 (437)
T ss_dssp             CTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECCTTS
T ss_pred             CCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeE----cCCCCEEEcchhhhhhcccCC
Confidence            35899999998855669999999999999999999999999999999999999    778899999999998765543

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.75  E-value=1.9e-18  Score=107.39  Aligned_cols=76  Identities=25%  Similarity=0.194  Sum_probs=66.6

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+..|++|.+++....+.+++..+..++.|++.|+.|+|+++++|+|+|++||++..  .....++|+|||+++....
T Consensus       131 ~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~--~~~~~~kl~DFG~a~~~~~  206 (364)
T 3op5_A          131 MDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY--KNPDQVYLVDYGLAYRYCP  206 (364)
T ss_dssp             EECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEES--SCTTCEEECCCTTCEESSG
T ss_pred             EeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEec--CCCCeEEEEECCcceeccc
Confidence            345589999999887566999999999999999999999999999999999999942  1567899999999987654

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.75  E-value=8.1e-18  Score=104.64  Aligned_cols=84  Identities=25%  Similarity=0.263  Sum_probs=70.0

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||+|.+++... +.+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..++|+|||+++........
T Consensus       103 ~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll----~~~g~vkL~DFG~a~~~~~~~~~  177 (353)
T 2i0e_A          103 VNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML----DSEGHIKIADFGMCKENIWDGVT  177 (353)
T ss_dssp             CCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTSCEEECCCTTCBCCCCTTCC
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE----cCCCcEEEEeCCcccccccCCcc
Confidence            3588999999876 459999999999999999999999999999999999999    77789999999999865544444


Q ss_pred             eeeccccCc
Q 038072           83 NVTGVGEGQ   91 (97)
Q Consensus        83 ~~~~~~~~~   91 (97)
                      ..+.+|++.
T Consensus       178 ~~~~~gt~~  186 (353)
T 2i0e_A          178 TKTFCGTPD  186 (353)
T ss_dssp             BCCCCSCGG
T ss_pred             cccccCCcc
Confidence            444455443

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.74  E-value=1.1e-17  Score=103.86  Aligned_cols=84  Identities=26%  Similarity=0.260  Sum_probs=69.7

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||+|.+++... +.+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..++|+|||+++........
T Consensus       100 ~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~g~vkL~DFG~a~~~~~~~~~  174 (345)
T 1xjd_A          100 LNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL----DKDGHIKIADFGMCKENMLGDAK  174 (345)
T ss_dssp             CTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTSCEEECCCTTCBCCCCTTCC
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEE----CCCCCEEEeEChhhhhcccCCCc
Confidence            3589999999876 459999999999999999999999999999999999999    77788999999999865443333


Q ss_pred             eeeccccCc
Q 038072           83 NVTGVGEGQ   91 (97)
Q Consensus        83 ~~~~~~~~~   91 (97)
                      ..+.+|++.
T Consensus       175 ~~~~~gt~~  183 (345)
T 1xjd_A          175 TNTFCGTPD  183 (345)
T ss_dssp             BCCCCSCGG
T ss_pred             ccCCCCCcc
Confidence            344455443

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.74  E-value=7.6e-18  Score=103.52  Aligned_cols=91  Identities=11%  Similarity=0.073  Sum_probs=65.3

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCc
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGL   81 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~   81 (97)
                      .+.+++|.+++......+++..+..++.|++.++.|+|+++++|+|+|++||++    .....++|+|||+++.......
T Consensus        97 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~----~~~~~~kL~DfG~a~~~~~~~~  172 (327)
T 3lzb_A           97 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEK  172 (327)
T ss_dssp             CCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----EETTEEEECCTTC---------
T ss_pred             ecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEE----cCCCCEEEccCcceeEccCccc
Confidence            467899999998876679999999999999999999999999999999999999    5567899999999987655443


Q ss_pred             ceeeccccCcccccc
Q 038072           82 LNVTGVGEGQVADIS   96 (97)
Q Consensus        82 ~~~~~~~~~~~~~~~   96 (97)
                      ......+.++..|++
T Consensus       173 ~~~~~~~~~t~~y~a  187 (327)
T 3lzb_A          173 EYHAEGGKVPIKWMA  187 (327)
T ss_dssp             -------CCCGGGSC
T ss_pred             cccccCCCccccccC
Confidence            333333344444543

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.74  E-value=1.2e-17  Score=111.00  Aligned_cols=85  Identities=25%  Similarity=0.256  Sum_probs=71.9

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||+|.+++... +.+++..+..++.|++.|+.|+|+++++|||+|++||++    +.+..+||+|||+++........
T Consensus       424 ~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl----~~~g~ikL~DFGla~~~~~~~~~  498 (674)
T 3pfq_A          424 VNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML----DSEGHIKIADFGMCKENIWDGVT  498 (674)
T ss_dssp             CCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEE----CSSSCEEECCCTTCEECCCTTCC
T ss_pred             cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEE----cCCCcEEEeecceeeccccCCcc
Confidence            3589999999876 459999999999999999999999999999999999999    77889999999999876554544


Q ss_pred             eeeccccCcc
Q 038072           83 NVTGVGEGQV   92 (97)
Q Consensus        83 ~~~~~~~~~~   92 (97)
                      ..+.+|++.|
T Consensus       499 ~~~~~GT~~Y  508 (674)
T 3pfq_A          499 TKTFCGTPDY  508 (674)
T ss_dssp             BCCCCSCSSS
T ss_pred             cccccCCCcc
Confidence            4555665543

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.74  E-value=1.3e-17  Score=105.56  Aligned_cols=73  Identities=26%  Similarity=0.313  Sum_probs=66.0

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      .||+|.+++.+.+..+++..++.++.|++.|+.|+|+++++|+|+|++||++    +.+..+||+|||+++......
T Consensus       144 ~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl----d~~g~vkL~DFGla~~~~~~~  216 (412)
T 2vd5_A          144 VGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL----DRCGHIRLADFGSCLKLRADG  216 (412)
T ss_dssp             CSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECCTTS
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeee----cCCCCEEEeechhheeccCCC
Confidence            4899999998765569999999999999999999999999999999999999    778899999999998766543

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.74  E-value=1.1e-17  Score=103.41  Aligned_cols=84  Identities=26%  Similarity=0.328  Sum_probs=69.8

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.|++|.+++... +.+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..++|+|||+++........
T Consensus        87 ~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~g~vkL~DFG~a~~~~~~~~~  161 (337)
T 1o6l_A           87 ANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML----DKDGHIKITDFGLCKEGISDGAT  161 (337)
T ss_dssp             CTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTSCEEECCCTTCBCSCCTTCC
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEE----CCCCCEEEeeccchhhcccCCCc
Confidence            3578999999876 459999999999999999999999999999999999999    77789999999999875544444


Q ss_pred             eeeccccCc
Q 038072           83 NVTGVGEGQ   91 (97)
Q Consensus        83 ~~~~~~~~~   91 (97)
                      ..+.+|++.
T Consensus       162 ~~~~~gt~~  170 (337)
T 1o6l_A          162 MKTFCGTPE  170 (337)
T ss_dssp             BCCCEECGG
T ss_pred             ccccccChh
Confidence            444455443

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.74  E-value=3.4e-18  Score=104.96  Aligned_cols=91  Identities=11%  Similarity=0.073  Sum_probs=70.9

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCc
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGL   81 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~   81 (97)
                      ...+++|.+++......+++..+..++.|++.|+.|+|+++++|+|+|++||++    ..+..++|+|||+++.......
T Consensus        97 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll----~~~~~~kl~Dfg~a~~~~~~~~  172 (327)
T 3poz_A           97 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEK  172 (327)
T ss_dssp             CCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----EETTEEEECCTTHHHHHTTTCC
T ss_pred             ecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEE----CCCCCEEEccCcceeEccCCcc
Confidence            356899999998876679999999999999999999999999999999999999    5567899999999987655443


Q ss_pred             ceeeccccCcccccc
Q 038072           82 LNVTGVGEGQVADIS   96 (97)
Q Consensus        82 ~~~~~~~~~~~~~~~   96 (97)
                      ......+.++..|++
T Consensus       173 ~~~~~~~~~t~~y~a  187 (327)
T 3poz_A          173 EYHAEGGKVPIKWMA  187 (327)
T ss_dssp             -------CCCGGGSC
T ss_pred             cccccCCCccccccC
Confidence            333333444555553

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.73  E-value=1.8e-17  Score=102.68  Aligned_cols=83  Identities=28%  Similarity=0.330  Sum_probs=69.0

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcce
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLN   83 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~~   83 (97)
                      .|++|.+++... +.+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..++|+|||+++.........
T Consensus        93 ~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~g~~kL~DFG~a~~~~~~~~~~  167 (345)
T 3a8x_A           93 NGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL----DSEGHIKLTDYGMCKEGLRPGDTT  167 (345)
T ss_dssp             CSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTSCEEECCGGGCBCSCCTTCCB
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE----CCCCCEEEEeccccccccCCCCcc
Confidence            478999999876 459999999999999999999999999999999999999    777899999999998654433333


Q ss_pred             eeccccCc
Q 038072           84 VTGVGEGQ   91 (97)
Q Consensus        84 ~~~~~~~~   91 (97)
                      .+.+|++.
T Consensus       168 ~~~~gt~~  175 (345)
T 3a8x_A          168 STFCGTPN  175 (345)
T ss_dssp             CCCCSCGG
T ss_pred             cccCCCcc
Confidence            34455443

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.73  E-value=1.4e-17  Score=101.66  Aligned_cols=75  Identities=28%  Similarity=0.309  Sum_probs=66.2

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      |+..+++|.+++...+..+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..+||+|||++......
T Consensus       136 ~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll----~~~~~~kl~DFG~a~~~~~~  210 (311)
T 3p1a_A          136 TELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFL----GPRGRCKLGDFGLLVELGTA  210 (311)
T ss_dssp             EECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CGGGCEEECCCTTCEECC--
T ss_pred             EeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE----CCCCCEEEccceeeeecccC
Confidence            4566889999988776669999999999999999999999999999999999999    77889999999999876543

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.73  E-value=1.7e-17  Score=103.81  Aligned_cols=84  Identities=24%  Similarity=0.280  Sum_probs=69.6

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.|++|.+++... +.+++..++.++.|++.|+.|+|+++++|+|+|++||++    +.+..++|+|||+++........
T Consensus       121 ~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll----~~~g~ikL~DFG~a~~~~~~~~~  195 (373)
T 2r5t_A          121 INGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL----DSQGHIVLTDFGLCKENIEHNST  195 (373)
T ss_dssp             CCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEECCCCBCGGGBCCCCC
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE----CCCCCEEEeeCccccccccCCCc
Confidence            3578999999876 459999999999999999999999999999999999999    77889999999999864443333


Q ss_pred             eeeccccCc
Q 038072           83 NVTGVGEGQ   91 (97)
Q Consensus        83 ~~~~~~~~~   91 (97)
                      ..+.+|++.
T Consensus       196 ~~~~~gt~~  204 (373)
T 2r5t_A          196 TSTFCGTPE  204 (373)
T ss_dssp             CCSBSCCCC
T ss_pred             cccccCCcc
Confidence            344455543

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.73  E-value=2.1e-17  Score=101.45  Aligned_cols=75  Identities=11%  Similarity=0.047  Sum_probs=65.5

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCce-----EEEeecCceee
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFM-----AKIVARGDKCL   75 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~-----~~i~dfg~a~~   75 (97)
                      |+..|++|.+++....+.+++..+..++.|++.|+.|+|+++++|+|+|++||++    .....     ++|+|||+++.
T Consensus        84 ~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill----~~~~~~~~~~~kl~DFg~a~~  159 (330)
T 2izr_A           84 LELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLI----GRPGNKTQQVIHIIDFALAKE  159 (330)
T ss_dssp             EECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CCGGGTCTTSEEECCCTTCEE
T ss_pred             EEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeee----ccCCCCCCceEEEEEccccee
Confidence            4556899999998765669999999999999999999999999999999999999    44444     99999999987


Q ss_pred             eccC
Q 038072           76 HERH   79 (97)
Q Consensus        76 ~~~~   79 (97)
                      ....
T Consensus       160 ~~~~  163 (330)
T 2izr_A          160 YIDP  163 (330)
T ss_dssp             SBCT
T ss_pred             eecC
Confidence            6543

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.73  E-value=2.7e-17  Score=102.65  Aligned_cols=90  Identities=17%  Similarity=0.136  Sum_probs=72.0

Q ss_pred             CCCCCHHHHHhhcc---------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEE
Q 038072            3 SSGVNFYNHSKKSA---------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKI   67 (97)
Q Consensus         3 ~~g~~l~~~l~~~~---------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i   67 (97)
                      +.|++|.+++....               ..+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..+||
T Consensus       169 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~~~~kl  244 (370)
T 2psq_A          169 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV----TENNVMKI  244 (370)
T ss_dssp             CTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----CTTCCEEE
T ss_pred             CCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEE----CCCCCEEE
Confidence            35789999998642               237899999999999999999999999999999999999    77789999


Q ss_pred             eecCceeeeccCCcceeeccccCcccccc
Q 038072           68 VARGDKCLHERHGLLNVTGVGEGQVADIS   96 (97)
Q Consensus        68 ~dfg~a~~~~~~~~~~~~~~~~~~~~~~~   96 (97)
                      +|||+++..........+..+.++..|++
T Consensus       245 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~a  273 (370)
T 2psq_A          245 ADFGLARDINNIDYYKKTTNGRLPVKWMA  273 (370)
T ss_dssp             CCCSSCEETTCCCTTCTTTTTTSCGGGCC
T ss_pred             ccccCCcccCcccceecccCCCcccceEC
Confidence            99999987665443333334455555653

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.73  E-value=9.8e-18  Score=103.49  Aligned_cols=73  Identities=26%  Similarity=0.413  Sum_probs=63.4

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      |++.+++|.+++... ..+++..+..++.|++.|+.|+|+++++|+|+|++||++.     +..++|+|||+++.....
T Consensus        88 ~e~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-----~~~~kl~DFG~a~~~~~~  160 (343)
T 3dbq_A           88 MECGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-----DGMLKLIDFGIANQMQPD  160 (343)
T ss_dssp             ECCCSEEHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-----TTEEEECCCSSSCCC---
T ss_pred             EeCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-----CCcEEEeecccccccCcc
Confidence            577889999999886 4599999999999999999999999999999999999993     356999999999876543

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.73  E-value=9.5e-18  Score=102.86  Aligned_cols=74  Identities=16%  Similarity=0.218  Sum_probs=65.9

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      +.|++|.+++....+.+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..++|+|||+++......
T Consensus        96 ~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~----~~~~~~kl~Dfg~a~~~~~~~  169 (325)
T 3kex_A           96 LPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLL----KSPSQVQVADFGVADLLPPDD  169 (325)
T ss_dssp             CTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEE----SSSSCEEECSCSGGGGSCCCT
T ss_pred             CCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEE----CCCCeEEECCCCcccccCccc
Confidence            46799999998765669999999999999999999999999999999999999    677889999999998765433

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.73  E-value=1.4e-17  Score=106.10  Aligned_cols=72  Identities=19%  Similarity=0.294  Sum_probs=65.4

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      |+..+++|.+++... ..+++..++.++.|++.|+.|+|+++++|+|+|++||++    +.+..+||+|||+++...
T Consensus       136 ~e~~~~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl----~~~~~~kl~DFGla~~~~  207 (458)
T 3rp9_A          136 LEIADSDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLV----NQDCSVKVCDFGLARTVD  207 (458)
T ss_dssp             ECCCSEEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTCCEEECCCTTCBCTT
T ss_pred             EeccccchhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEE----CCCCCEeecccccchhcc
Confidence            466789999999875 459999999999999999999999999999999999999    778899999999998754

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.72  E-value=4.1e-17  Score=101.03  Aligned_cols=88  Identities=20%  Similarity=0.189  Sum_probs=70.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.|++|.+++... +.+++..+..++.|++.|+.|+|+++++|+|+|++||++.........++|+|||++.........
T Consensus        98 ~~gg~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~  176 (342)
T 2qr7_A           98 MKGGELLDKILRQ-KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL  176 (342)
T ss_dssp             CCSCBHHHHHHTC-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCC
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCc
Confidence            3588999999876 459999999999999999999999999999999999998543223346999999999987655444


Q ss_pred             eeeccccCc
Q 038072           83 NVTGVGEGQ   91 (97)
Q Consensus        83 ~~~~~~~~~   91 (97)
                      ..+.+|++.
T Consensus       177 ~~~~~gt~~  185 (342)
T 2qr7_A          177 LMTPCYTAN  185 (342)
T ss_dssp             BCCSSCCSS
T ss_pred             eeccCCCcc
Confidence            444455443

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.72  E-value=3.7e-17  Score=103.44  Aligned_cols=71  Identities=31%  Similarity=0.378  Sum_probs=64.2

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      .||+|.+++..  ..+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..+||+|||+++......
T Consensus       152 ~gg~L~~~l~~--~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl----~~~g~ikL~DFG~a~~~~~~~  222 (410)
T 3v8s_A          152 PGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL----DKSGHLKLADFGTCMKMNKEG  222 (410)
T ss_dssp             TTEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECCTTS
T ss_pred             CCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeE----CCCCCEEEeccceeEeeccCC
Confidence            48999999976  459999999999999999999999999999999999999    778899999999998766543

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.72  E-value=1.9e-17  Score=105.05  Aligned_cols=74  Identities=20%  Similarity=0.276  Sum_probs=64.7

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      |+..+++|.+++... ..+++..++.++.|++.|+.|+|+++++|+|+|++||++    +.+..+||+|||+++.....
T Consensus       109 ~e~~~~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl----~~~~~~kL~DFGla~~~~~~  182 (432)
T 3n9x_A          109 LEIADSDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLL----NQDCSVKVCDFGLARTINSE  182 (432)
T ss_dssp             EECCSEEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEEC---
T ss_pred             EecCCcCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEE----CCCCCEEEccCCCccccccc
Confidence            456678999999875 459999999999999999999999999999999999999    77889999999999876543

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.72  E-value=1.7e-17  Score=104.22  Aligned_cols=72  Identities=25%  Similarity=0.388  Sum_probs=63.1

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |++.+++|.+++... ..+++..+..++.|++.|+.|+|+++++|+|+|++||++    . +..+||+|||+++....
T Consensus       135 ~E~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll----~-~~~~kl~DFG~a~~~~~  206 (390)
T 2zmd_A          135 MECGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI----V-DGMLKLIDFGIANQMQP  206 (390)
T ss_dssp             EECCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEE----S-SSCEEECCCSSSCCC--
T ss_pred             EecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE----E-CCeEEEEecCccccccC
Confidence            567889999999886 458999999999999999999999999999999999999    3 35799999999987654

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.71  E-value=4.7e-17  Score=100.28  Aligned_cols=71  Identities=25%  Similarity=0.294  Sum_probs=64.0

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .|++|.+++... +.+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..++|+|||++......
T Consensus        97 ~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll----~~~~~~kl~DFG~a~~~~~~  167 (328)
T 3fe3_A           97 SGGEVFDYLVAH-GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL----DADMNIKIADFGFSNEFTVG  167 (328)
T ss_dssp             TTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTSCEEECSTTCCGGGSSS
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEE----cCCCCEEEeeccCceecCCC
Confidence            488999999876 459999999999999999999999999999999999999    77889999999999765543

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.71  E-value=6.5e-17  Score=101.16  Aligned_cols=90  Identities=17%  Similarity=0.138  Sum_probs=71.4

Q ss_pred             CCCCCHHHHHhhcc---------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEE
Q 038072            3 SSGVNFYNHSKKSA---------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKI   67 (97)
Q Consensus         3 ~~g~~l~~~l~~~~---------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i   67 (97)
                      +.|++|.+++....               ..+++..+..++.|++.|+.|+|+++++|+|+|++||++    ..+..++|
T Consensus       157 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~~kL  232 (382)
T 3tt0_A          157 ASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV----TEDNVMKI  232 (382)
T ss_dssp             CTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTCCEEE
T ss_pred             cCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEE----cCCCcEEE
Confidence            34789999998753               348999999999999999999999999999999999999    77789999


Q ss_pred             eecCceeeeccCCcceeeccccCcccccc
Q 038072           68 VARGDKCLHERHGLLNVTGVGEGQVADIS   96 (97)
Q Consensus        68 ~dfg~a~~~~~~~~~~~~~~~~~~~~~~~   96 (97)
                      +|||+++.............+.++..|++
T Consensus       233 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~a  261 (382)
T 3tt0_A          233 ADFGLARDIHHIDYYKKTTNGRLPVKWMA  261 (382)
T ss_dssp             CSCSCCCCSSCCCTTCCCTTCCCGGGGSC
T ss_pred             cccCcccccccccccccccCCCCCcceeC
Confidence            99999987655433333333444445543

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.71  E-value=4e-17  Score=98.63  Aligned_cols=75  Identities=19%  Similarity=0.173  Sum_probs=65.8

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      |+..++++.+.+....+.+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..++|+|||++......
T Consensus        80 ~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~----~~~~~~kl~Dfg~~~~~~~~  154 (292)
T 3o0g_A           80 FEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI----NRNGELKLANFGLARAFGIP  154 (292)
T ss_dssp             EECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECCSC
T ss_pred             EecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCCEEEeecccceecCCc
Confidence            4556678888887765679999999999999999999999999999999999999    77789999999999876543

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.71  E-value=5.2e-17  Score=98.07  Aligned_cols=79  Identities=16%  Similarity=0.148  Sum_probs=65.9

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCC-CCCceEEEeecCceeeeccC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGK-DAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~-~~~~~~~i~dfg~a~~~~~~   79 (97)
                      |+..|++|.+++......+++..+..++.|++.|+.|+|+++++|+|++++||++.... .....++|+|||+++.....
T Consensus        85 ~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~  164 (298)
T 1csn_A           85 IDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP  164 (298)
T ss_dssp             EECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred             EEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence            34568999999987656699999999999999999999999999999999999994321 12334999999999876643

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.71  E-value=3.3e-17  Score=101.32  Aligned_cols=73  Identities=25%  Similarity=0.406  Sum_probs=65.6

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+..+|+|.+++... +.+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||++.....
T Consensus        88 ~E~~~g~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll----~~~~~~kl~DFG~s~~~~~  160 (336)
T 3h4j_B           88 IEYAGGELFDYIVEK-KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLL----DDNLNVKIADFGLSNIMTD  160 (336)
T ss_dssp             ECCCCEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEE----CTTCCEEECCSSCTBTTTT
T ss_pred             EECCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEE----cCCCCEEEEEeccceeccC
Confidence            466789999998876 459999999999999999999999999999999999999    7778899999999986554

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.71  E-value=6.9e-17  Score=101.51  Aligned_cols=71  Identities=23%  Similarity=0.291  Sum_probs=64.5

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++... ..+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..++|+|||++.....
T Consensus        97 ~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll----~~~g~vkL~DFG~a~~~~~  167 (384)
T 4fr4_A           97 LLGGDLRYHLQQN-VHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILL----DEHGHVHITDFNIAAMLPR  167 (384)
T ss_dssp             CTTEEHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECCT
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE----CCCCCEEEeccceeeeccC
Confidence            4588999999875 459999999999999999999999999999999999999    7788999999999987654

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.71  E-value=9.4e-17  Score=97.50  Aligned_cols=81  Identities=26%  Similarity=0.262  Sum_probs=68.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.|++|.+++...  .+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||++.........
T Consensus        99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  172 (297)
T 3fxz_A           99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL----GMDGSVKLTDFGFCAQITPEQSK  172 (297)
T ss_dssp             CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTCCEEECCCTTCEECCSTTCC
T ss_pred             CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEE----CCCCCEEEeeCCCceecCCcccc
Confidence            4589999999873  59999999999999999999999999999999999999    77788999999999876654443


Q ss_pred             eeecccc
Q 038072           83 NVTGVGE   89 (97)
Q Consensus        83 ~~~~~~~   89 (97)
                      ..+..|+
T Consensus       173 ~~~~~gt  179 (297)
T 3fxz_A          173 RSTMVGT  179 (297)
T ss_dssp             BCCCCSC
T ss_pred             cCCccCC
Confidence            3333443

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.71  E-value=4.3e-17  Score=99.55  Aligned_cols=74  Identities=19%  Similarity=0.276  Sum_probs=65.9

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+...++|.+.+......+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..++|+|||+++....
T Consensus        98 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~----~~~~~~kl~Dfg~a~~~~~  171 (311)
T 3niz_A           98 FEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI----NSDGALKLADFGLARAFGI  171 (311)
T ss_dssp             EECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEETTS
T ss_pred             EcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEE----CCCCCEEEccCcCceecCC
Confidence            4556678999988776669999999999999999999999999999999999999    7778899999999987653

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.71  E-value=1e-16  Score=98.45  Aligned_cols=72  Identities=14%  Similarity=0.192  Sum_probs=64.6

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .|++|.+++......+++..+..++.|++.++.|+|+.+++|+|++++||++    +.+..++|+|||+++.....
T Consensus       133 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~a~~~~~~  204 (325)
T 3kul_A          133 ENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV----DSNLVCKVSDFGLSRVLEDD  204 (325)
T ss_dssp             TTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCCSSCEECC--
T ss_pred             CCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE----CCCCCEEECCCCcccccccC
Confidence            4789999998765669999999999999999999999999999999999999    77889999999999876543

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.70  E-value=9.3e-17  Score=98.56  Aligned_cols=76  Identities=25%  Similarity=0.387  Sum_probs=65.5

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      +.|++|.+++......+++..+..++.|++.|+.|+|+++++|+|++|+||++..  ..+..++|+|||++.......
T Consensus        83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~--~~~~~~kl~Dfg~a~~~~~~~  158 (321)
T 1tki_A           83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT--RRSSTIKIIEFGQARQLKPGD  158 (321)
T ss_dssp             CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS--SSCCCEEECCCTTCEECCTTC
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcc--CCCCCEEEEECCCCeECCCCC
Confidence            3578999999876556999999999999999999999999999999999999942  126789999999998876543

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.70  E-value=1.4e-16  Score=101.64  Aligned_cols=86  Identities=21%  Similarity=0.229  Sum_probs=68.9

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.|++|.+.+... +.+++..+..++.|++.|+.|+|+++++|+|+||+||++... ..+..++|+|||++.........
T Consensus        92 ~~gg~L~~~i~~~-~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~-~~~~~vkL~DFG~a~~~~~~~~~  169 (444)
T 3soa_A           92 VTGGELFEDIVAR-EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASK-LKGAAVKLADFGLAIEVEGEQQA  169 (444)
T ss_dssp             CBCCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBS-STTCCEEECCCSSCBCCCTTCCB
T ss_pred             CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecc-CCCCcEEEccCceeEEecCCCce
Confidence            4578999999876 459999999999999999999999999999999999999432 24577999999999876654433


Q ss_pred             eeeccccC
Q 038072           83 NVTGVGEG   90 (97)
Q Consensus        83 ~~~~~~~~   90 (97)
                      .....|++
T Consensus       170 ~~~~~gt~  177 (444)
T 3soa_A          170 WFGFAGTP  177 (444)
T ss_dssp             CCCSCSCG
T ss_pred             eecccCCc
Confidence            33334443

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.70  E-value=8.2e-17  Score=97.90  Aligned_cols=74  Identities=23%  Similarity=0.338  Sum_probs=64.8

Q ss_pred             CCCCCCCHHHHHhhccc-ccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAK-ILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~-~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+..+++|.+++..... .+++..+..++.|++.|+.|+|+++++|+|+|++||++    ..+..++|+|||+++....
T Consensus        98 ~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~----~~~~~~kl~Dfg~a~~~~~  172 (308)
T 3g33_A           98 FEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV----TSGGTVKLADFGLARIYSY  172 (308)
T ss_dssp             EECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEE----CTTSCEEECSCSCTTTSTT
T ss_pred             ehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----cCCCCEEEeeCccccccCC
Confidence            34567899999987633 38999999999999999999999999999999999999    7778999999999976543

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.70  E-value=8.6e-17  Score=103.57  Aligned_cols=79  Identities=19%  Similarity=0.173  Sum_probs=67.9

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      |+..|++|.+++......+++..+..++.|++.++.|+|+++++|+|+|++||++... .....++|+|||+++......
T Consensus        82 me~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~-~~~~~vkL~DFGla~~~~~~~  160 (483)
T 3sv0_A           82 MDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG-RRANQVYIIDFGLAKKYRDTS  160 (483)
T ss_dssp             EECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCG-GGTTCEEECCCTTCEECBCTT
T ss_pred             EECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecC-CCCCeEEEEeCCcceeccCCc
Confidence            4566999999998765679999999999999999999999999999999999999421 246789999999998766543

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.70  E-value=1.7e-16  Score=96.61  Aligned_cols=73  Identities=16%  Similarity=0.149  Sum_probs=65.1

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.|++|.+++......+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||+++.....
T Consensus        89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~  161 (310)
T 3s95_A           89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV----RENKNVVVADFGLARLMVDE  161 (310)
T ss_dssp             CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE----CTTSCEEECCCTTCEECC--
T ss_pred             cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEE----CCCCCEEEeecccceecccc
Confidence            45789999999865669999999999999999999999999999999999999    77888999999999876543

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.70  E-value=6.8e-17  Score=102.80  Aligned_cols=83  Identities=27%  Similarity=0.338  Sum_probs=66.0

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGL   81 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~-~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~   81 (97)
                      +.|++|.+++... ..+++..+..++.|++.|+.|+|+ .+++|+|+|++||++    +.+..++|+|||+++.......
T Consensus       230 ~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll----~~~~~~kl~DFG~a~~~~~~~~  304 (446)
T 4ejn_A          230 ANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML----DKDGHIKITDFGLCKEGIKDGA  304 (446)
T ss_dssp             CSSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEE----CSSSCEEECCCCCCCTTCC---
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEE----CCCCCEEEccCCCceeccCCCc
Confidence            3478999999876 459999999999999999999998 899999999999999    6778999999999986444333


Q ss_pred             ceeeccccC
Q 038072           82 LNVTGVGEG   90 (97)
Q Consensus        82 ~~~~~~~~~   90 (97)
                      ...+.+|++
T Consensus       305 ~~~~~~gt~  313 (446)
T 4ejn_A          305 TMKTFCGTP  313 (446)
T ss_dssp             --CCSSSCG
T ss_pred             ccccccCCc
Confidence            333444443

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.70  E-value=1.1e-16  Score=98.15  Aligned_cols=73  Identities=22%  Similarity=0.256  Sum_probs=64.8

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc----------CccccCCCCCcEEEeeCCCCCceEEEeecCc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSH----------GVAHCGIKLDNILLVPGKDAGFMAKIVARGD   72 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~----------~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~   72 (97)
                      +.+++|.+++..  ..+++..+..++.|++.|+.|+|+.          +++|+|+|++||++    +....+||+|||+
T Consensus       104 ~~~g~L~~~l~~--~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill----~~~~~~kL~DFg~  177 (322)
T 3soc_A          104 HEKGSLSDFLKA--NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL----KNNLTACIADFGL  177 (322)
T ss_dssp             CTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEE----CTTCCEEECCCTT
T ss_pred             CCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEE----CCCCeEEEccCCc
Confidence            347899999987  3499999999999999999999999          99999999999999    7778999999999


Q ss_pred             eeeeccCCc
Q 038072           73 KCLHERHGL   81 (97)
Q Consensus        73 a~~~~~~~~   81 (97)
                      ++.......
T Consensus       178 a~~~~~~~~  186 (322)
T 3soc_A          178 ALKFEAGKS  186 (322)
T ss_dssp             CEEECTTSC
T ss_pred             ccccccccC
Confidence            988765443

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.70  E-value=1.1e-16  Score=96.42  Aligned_cols=78  Identities=19%  Similarity=0.204  Sum_probs=66.8

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      |+..|++|.+++......+++..+..++.|++.|+.|+|+++++|+|++++||++... .....++|+|||+++.....
T Consensus        84 ~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~-~~~~~~kL~Dfg~a~~~~~~  161 (296)
T 4hgt_A           84 MELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG-KKGNLVYIIDFGLAKKYRDA  161 (296)
T ss_dssp             EECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCG-GGTTCEEECCCTTCEECBCT
T ss_pred             EEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeecc-CCCCeEEEecCccceeccCc
Confidence            4556899999998765669999999999999999999999999999999999999321 24567999999999876654

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.69  E-value=1.1e-16  Score=98.40  Aligned_cols=82  Identities=23%  Similarity=0.292  Sum_probs=62.8

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.|++|.+++... +.+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||+++........
T Consensus       103 ~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill----~~~~~~kl~Dfg~~~~~~~~~~~  177 (327)
T 3a62_A          103 LSGGELFMQLERE-GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML----NHQGHVKLTDFGLCKESIHDGTV  177 (327)
T ss_dssp             CTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE----CTTSCEEECCCSCC---------
T ss_pred             CCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEE----CCCCcEEEEeCCcccccccCCcc
Confidence            3578999999875 459999999999999999999999999999999999999    67788999999999865443333


Q ss_pred             eeecccc
Q 038072           83 NVTGVGE   89 (97)
Q Consensus        83 ~~~~~~~   89 (97)
                      ....+|+
T Consensus       178 ~~~~~gt  184 (327)
T 3a62_A          178 THTFCGT  184 (327)
T ss_dssp             -CTTSSC
T ss_pred             ccccCCC
Confidence            3333443

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.69  E-value=6.7e-17  Score=99.22  Aligned_cols=72  Identities=24%  Similarity=0.367  Sum_probs=63.9

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.|++|.+++... ..+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||++......
T Consensus        87 ~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll----~~~~~~kl~Dfg~a~~~~~~  158 (323)
T 3tki_A           87 CSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL----DERDNLKISDFGLATVFRYN  158 (323)
T ss_dssp             CTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCCTTCEECEET
T ss_pred             CCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEE----eCCCCEEEEEeeccceeccC
Confidence            3478999998775 449999999999999999999999999999999999999    77788999999999876543

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.69  E-value=8.6e-17  Score=100.66  Aligned_cols=71  Identities=20%  Similarity=0.213  Sum_probs=63.7

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      |+..+++|.+++..  +.+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..++|+|||+++...
T Consensus        90 ~e~~~~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll----~~~~~~kl~DFG~a~~~~  160 (388)
T 3oz6_A           90 FDYMETDLHAVIRA--NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILL----NAECHVKVADFGLSRSFV  160 (388)
T ss_dssp             EECCSEEHHHHHHH--TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEESS
T ss_pred             ecccCcCHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEE----cCCCCEEecCCccccccc
Confidence            45567899999876  458999999999999999999999999999999999999    778899999999998754

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.69  E-value=1.7e-16  Score=98.52  Aligned_cols=71  Identities=18%  Similarity=0.250  Sum_probs=64.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++... +.+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||+++....
T Consensus       123 ~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~g~~kL~DFg~a~~~~~  193 (350)
T 1rdq_E          123 VAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVTDFGFAKRVKG  193 (350)
T ss_dssp             CTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECSS
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEE----CCCCCEEEcccccceeccC
Confidence            3489999999876 459999999999999999999999999999999999999    7778899999999987654

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.69  E-value=1.9e-16  Score=97.22  Aligned_cols=71  Identities=23%  Similarity=0.260  Sum_probs=64.1

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++... +.+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||+++....
T Consensus        88 ~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~g~~kL~Dfg~a~~~~~  158 (318)
T 1fot_A           88 IEGGELFSLLRKS-QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL----DKNGHIKITDFGFAKYVPD  158 (318)
T ss_dssp             CCSCBHHHHHHHT-SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE----CTTSCEEECCCSSCEECSS
T ss_pred             CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEE----cCCCCEEEeecCcceecCC
Confidence            3578999999876 459999999999999999999999999999999999999    7778999999999987543

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.69  E-value=1.3e-16  Score=99.76  Aligned_cols=70  Identities=17%  Similarity=0.185  Sum_probs=63.8

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++......+++..+..++.|++.|+.|+|+++++|+|++++||++    ..+..+||+|||+++...
T Consensus       195 ~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~----~~~~~~kl~DfG~s~~~~  264 (377)
T 3cbl_A          195 QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV----TEKNVLKISDFGMSREEA  264 (377)
T ss_dssp             TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCGGGCEECT
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEE----cCCCcEEECcCCCceecC
Confidence            4789999998765569999999999999999999999999999999999999    777899999999998644

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.69  E-value=2.2e-16  Score=98.43  Aligned_cols=76  Identities=24%  Similarity=0.345  Sum_probs=63.8

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.|++|.+++... +.+++..+..++.|++.|+.|+|+++++|+|++|+||++.........++|+|||++......
T Consensus        97 ~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~  172 (361)
T 2yab_A           97 VSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG  172 (361)
T ss_dssp             CCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTT
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCC
Confidence            3489999999875 459999999999999999999999999999999999999432112237999999999876653

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.68  E-value=2.2e-16  Score=102.92  Aligned_cols=85  Identities=21%  Similarity=0.207  Sum_probs=69.9

Q ss_pred             CCCCCHHHHHhhcc---cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKSA---KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~~---~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.|++|.+++....   ..+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..++|+|||+++.....
T Consensus       267 ~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl----~~~g~vkL~DFGla~~~~~~  342 (543)
T 3c4z_A          267 MNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL----DDDGNVRISDLGLAVELKAG  342 (543)
T ss_dssp             CTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTSCEEECCCTTCEECCTT
T ss_pred             ccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEE----eCCCCEEEeecceeeeccCC
Confidence            35899999987642   349999999999999999999999999999999999999    77889999999999886654


Q ss_pred             CcceeeccccCc
Q 038072           80 GLLNVTGVGEGQ   91 (97)
Q Consensus        80 ~~~~~~~~~~~~   91 (97)
                      .....+.+|++.
T Consensus       343 ~~~~~~~~GT~~  354 (543)
T 3c4z_A          343 QTKTKGYAGTPG  354 (543)
T ss_dssp             CCCBCCCCSCTT
T ss_pred             CcccccccCCcc
Confidence            433334455443

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.68  E-value=1.1e-16  Score=98.96  Aligned_cols=56  Identities=21%  Similarity=0.243  Sum_probs=52.0

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           19 LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        19 l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..++|+|||+++....
T Consensus       190 l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll----~~~~~~kl~Dfg~a~~~~~  245 (359)
T 3vhe_A          190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL----SEKNVVKICDFGLARDIYK  245 (359)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGCEEECCCGGGSCTTS
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE----cCCCcEEEEeccceeeecc
Confidence            8899999999999999999999999999999999999    6778899999999986544

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.68  E-value=2.3e-16  Score=95.14  Aligned_cols=78  Identities=19%  Similarity=0.204  Sum_probs=66.6

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      |+..+++|.+++......+++..+..++.|++.|+.|+|+++++|+|++++||++... ..+..++|+|||++......
T Consensus        84 ~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~-~~~~~~kl~Dfg~~~~~~~~  161 (296)
T 3uzp_A           84 MELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG-KKGNLVYIIDFGLAKKYRDA  161 (296)
T ss_dssp             EECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCG-GGTTCEEECCCTTCEECBCT
T ss_pred             EEecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecC-CCCCeEEEeeCCCccccccc
Confidence            3556899999998665669999999999999999999999999999999999999321 24567999999999876654

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.68  E-value=3e-16  Score=95.34  Aligned_cols=89  Identities=16%  Similarity=0.115  Sum_probs=70.2

Q ss_pred             CCCCCHHHHHhhcc-----------------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCC
Q 038072            3 SSGVNFYNHSKKSA-----------------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGK   59 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-----------------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~   59 (97)
                      +.|++|.+++....                       ..+++..+..++.|++.|+.|+|+++++|+|++++||++    
T Consensus       108 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli----  183 (314)
T 2ivs_A          108 AKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV----  183 (314)
T ss_dssp             CTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----
T ss_pred             cCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEE----
Confidence            34789999987642                       238999999999999999999999999999999999999    


Q ss_pred             CCCceEEEeecCceeeeccCCcceeeccccCccccc
Q 038072           60 DAGFMAKIVARGDKCLHERHGLLNVTGVGEGQVADI   95 (97)
Q Consensus        60 ~~~~~~~i~dfg~a~~~~~~~~~~~~~~~~~~~~~~   95 (97)
                      ..+..++|+|||++..............+.++..|+
T Consensus       184 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~  219 (314)
T 2ivs_A          184 AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWM  219 (314)
T ss_dssp             ETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGC
T ss_pred             cCCCCEEEccccccccccccccceeccCCCCccccc
Confidence            667789999999998776544333333334444454

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.68  E-value=1.6e-16  Score=97.62  Aligned_cols=84  Identities=24%  Similarity=0.306  Sum_probs=62.6

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.|++|.+++... +.+++..+..++.|++.++.|+|+++++|+|++++||++... .....++|+|||+++........
T Consensus        88 ~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~-~~~~~~kl~Dfg~a~~~~~~~~~  165 (325)
T 3kn6_A           88 LNGGELFERIKKK-KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDE-NDNLEIKIIDFGFARLKPPDNQP  165 (325)
T ss_dssp             CCSCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC-----CEEEECCCTTCEECCC----
T ss_pred             cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecC-CCcccEEEeccccceecCCCCCc
Confidence            3478999999886 559999999999999999999999999999999999999532 22347999999999876554433


Q ss_pred             eeeccc
Q 038072           83 NVTGVG   88 (97)
Q Consensus        83 ~~~~~~   88 (97)
                      ..+.+|
T Consensus       166 ~~~~~~  171 (325)
T 3kn6_A          166 LKTPCF  171 (325)
T ss_dssp             ------
T ss_pred             ccccCC
Confidence            333344

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.68  E-value=1.8e-16  Score=95.83  Aligned_cols=73  Identities=16%  Similarity=0.165  Sum_probs=62.5

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.|++|.+++...+..+++..+..++.|++.++.|+|+++++|+|++++||++    +.+..++|+|||++......
T Consensus        95 ~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~----~~~~~~kl~Dfg~~~~~~~~  167 (295)
T 3ugc_A           95 LPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV----ENENRVKIGDFGLTKVLPQD  167 (295)
T ss_dssp             CTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----EETTEEEECCCCSCC-----
T ss_pred             CCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEE----cCCCeEEEccCcccccccCC
Confidence            34889999998876669999999999999999999999999999999999999    55678999999999876543

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.68  E-value=1.1e-16  Score=100.82  Aligned_cols=75  Identities=17%  Similarity=0.258  Sum_probs=62.6

Q ss_pred             CCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.||+|.+++.... ..+++..+..++.|++.|+.|+|+++++|+|+|++||++... ..+..+||+|||+++....
T Consensus       141 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~-~~~~~~kl~DFG~a~~~~~  216 (400)
T 1nxk_A          141 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTS  216 (400)
T ss_dssp             CCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-STTCCEEECCCTTCEECC-
T ss_pred             CCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecC-CCCccEEEEecccccccCC
Confidence            35789999998753 349999999999999999999999999999999999999421 1267899999999987654

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.68  E-value=2.6e-16  Score=98.94  Aligned_cols=76  Identities=26%  Similarity=0.361  Sum_probs=65.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      +.|++|.+++......+++..+..++.|++.|+.|+|+++++|+|++++||++..  .....++|+|||+++......
T Consensus       130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~--~~~~~vkL~DFG~a~~~~~~~  205 (387)
T 1kob_A          130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET--KKASSVKIIDFGLATKLNPDE  205 (387)
T ss_dssp             CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS--TTCCCEEECCCTTCEECCTTS
T ss_pred             CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEec--CCCCceEEEecccceecCCCc
Confidence            4588999999876556999999999999999999999999999999999999932  134679999999998876543

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.68  E-value=9.2e-17  Score=96.99  Aligned_cols=72  Identities=25%  Similarity=0.368  Sum_probs=57.6

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++......+++..+..++.|++.++.|+|+++++|+|++++||++    ..+..++|+|||++.....
T Consensus       101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~  172 (289)
T 3og7_A          101 CEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL----HEDNTVKIGDFGLATEKSR  172 (289)
T ss_dssp             CCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----ETTTEEEECCCC-------
T ss_pred             cCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEE----CCCCCEEEccceecccccc
Confidence            45789999997765669999999999999999999999999999999999999    6678899999999976553

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.68  E-value=3e-16  Score=97.38  Aligned_cols=70  Identities=30%  Similarity=0.442  Sum_probs=63.5

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++... ..+++..+..++.|++.++.|+|+++++|+|+|++||++    +.+..++|+|||+++....
T Consensus       142 ~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~~kl~DfG~a~~~~~  211 (355)
T 1vzo_A          142 NGGELFTHLSQR-ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL----DSNGHVVLTDFGLSKEFVA  211 (355)
T ss_dssp             CSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEESCSSEEEECCG
T ss_pred             CCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCcEEEeeCCCCeeccc
Confidence            478999999876 459999999999999999999999999999999999999    7778999999999987643

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.68  E-value=1.3e-16  Score=96.00  Aligned_cols=72  Identities=15%  Similarity=0.072  Sum_probs=57.1

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.+++|.+++...+..+++..+..++.|++.++.|+|+++++|+|++++||++    ..+..++|+|||+++....
T Consensus        97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~  168 (281)
T 1mp8_A           97 CTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV----SSNDCVKLGDFGLSRYMED  168 (281)
T ss_dssp             CTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----EETTEEEECC---------
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEE----CCCCCEEECccccccccCc
Confidence            35689999998765569999999999999999999999999999999999999    5567899999999987654

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.68  E-value=5.6e-16  Score=94.67  Aligned_cols=77  Identities=26%  Similarity=0.368  Sum_probs=65.8

Q ss_pred             CCCCHHHHHhhcccc--cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            4 SGVNFYNHSKKSAKI--LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~--l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      .|++|.+++......  +++..+..++.|++.|+.|+|+++++|+|+|++||++...++....++|+|||+++......
T Consensus        92 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~  170 (319)
T 4euu_A           92 PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE  170 (319)
T ss_dssp             TTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTC
T ss_pred             CCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCC
Confidence            478999999875332  89999999999999999999999999999999999985544556789999999998766543

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.68  E-value=2e-16  Score=98.84  Aligned_cols=72  Identities=17%  Similarity=0.230  Sum_probs=58.8

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .|++|.+++......+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||+++.....
T Consensus       129 ~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~a~~~~~~  200 (373)
T 2qol_A          129 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLGRVLEDD  200 (373)
T ss_dssp             TTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTCCEEECCC---------
T ss_pred             CCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE----cCCCCEEECcCccccccccC
Confidence            4799999998765669999999999999999999999999999999999999    77889999999999876543

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.68  E-value=2.4e-16  Score=96.34  Aligned_cols=74  Identities=15%  Similarity=0.083  Sum_probs=58.9

Q ss_pred             CCCCCHHHHHhhcc-----cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSA-----KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-----~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++....     ..+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..++|+|||+++...
T Consensus       113 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli----~~~~~~kl~Dfg~a~~~~  188 (323)
T 3qup_A          113 MKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCML----AEDMTVCVADFGLSRKIY  188 (323)
T ss_dssp             CTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CTTSCEEECCCCC-----
T ss_pred             ccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEE----cCCCCEEEeecccccccc
Confidence            45789999986532     148999999999999999999999999999999999999    777899999999998765


Q ss_pred             cCC
Q 038072           78 RHG   80 (97)
Q Consensus        78 ~~~   80 (97)
                      ...
T Consensus       189 ~~~  191 (323)
T 3qup_A          189 SGD  191 (323)
T ss_dssp             ---
T ss_pred             ccc
Confidence            433

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.68  E-value=1.2e-16  Score=97.93  Aligned_cols=74  Identities=20%  Similarity=0.236  Sum_probs=64.8

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+..+++|.+++......+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||+++....
T Consensus        79 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~----~~~~~~kl~Dfg~a~~~~~  152 (324)
T 3mtl_A           79 FEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLI----NERGELKLADFGLARAKSI  152 (324)
T ss_dssp             EECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEE----CTTCCEEECSSSEEECC--
T ss_pred             ecccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEE----CCCCCEEEccCcccccccC
Confidence            4556789999998875669999999999999999999999999999999999999    6778899999999986553

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.67  E-value=9.1e-17  Score=100.30  Aligned_cols=71  Identities=15%  Similarity=0.104  Sum_probs=61.0

Q ss_pred             CCCCCCCHHHHHhhcccccC-------HHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCce
Q 038072            1 MASSGVNFYNHSKKSAKILL-------EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDK   73 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~-------~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a   73 (97)
                      |+..+|+|.+++... +.++       +..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..+||+|||++
T Consensus       179 ~E~~~g~L~~~l~~~-~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll----~~~~~~kL~DFG~a  253 (377)
T 3byv_A          179 YPRMQSNLQTFGEVL-LSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL----DQRGGVFLTGFEHL  253 (377)
T ss_dssp             EECCSEEHHHHHHHH-HHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----CTTCCEEECCGGGC
T ss_pred             EeccCCCHHHHHHhc-cccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCCEEEEechhh
Confidence            455678999999875 2244       47888899999999999999999999999999999    66789999999999


Q ss_pred             eee
Q 038072           74 CLH   76 (97)
Q Consensus        74 ~~~   76 (97)
                      +..
T Consensus       254 ~~~  256 (377)
T 3byv_A          254 VRD  256 (377)
T ss_dssp             EET
T ss_pred             eec
Confidence            863

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.67  E-value=2e-16  Score=95.91  Aligned_cols=71  Identities=25%  Similarity=0.291  Sum_probs=62.9

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++... +.+++..+..++.|++.++.|+|+++++|+|++++||++    +.+..++|+|||++.....
T Consensus        93 ~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~  163 (294)
T 4eqm_A           93 IEGPTLSEYIESH-GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILI----DSNKTLKIFDFGIAKALSE  163 (294)
T ss_dssp             CCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEECCCSSSTTC--
T ss_pred             CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCCEEEEeCCCcccccc
Confidence            3578999999876 459999999999999999999999999999999999999    7778899999999976543

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.67  E-value=7.6e-17  Score=97.31  Aligned_cols=73  Identities=16%  Similarity=0.147  Sum_probs=64.6

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      |+...++|.+++....+.+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||++....
T Consensus        79 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~  151 (288)
T 1ob3_A           79 FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI----NREGELKIADFGLARAFG  151 (288)
T ss_dssp             EECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTSCEEECCTTHHHHHC
T ss_pred             EEecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----cCCCCEEEeECccccccC
Confidence            3455678999988765669999999999999999999999999999999999999    777889999999987654

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.67  E-value=6.6e-17  Score=100.76  Aligned_cols=91  Identities=22%  Similarity=0.174  Sum_probs=68.3

Q ss_pred             CCCCHHHHHhhcc------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSA------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++....      ..+++..+..++.|++.|+.|+|+++++|+|+|++||++... .....++|+|||+++...
T Consensus       157 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~-~~~~~~kL~DFG~a~~~~  235 (367)
T 3l9p_A          157 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIY  235 (367)
T ss_dssp             TTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCS-STTCCEEECCCHHHHHHH
T ss_pred             CCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecC-CCCceEEECCCccccccc
Confidence            4789999998643      348999999999999999999999999999999999999421 234569999999998654


Q ss_pred             cCCcceeeccccCccccc
Q 038072           78 RHGLLNVTGVGEGQVADI   95 (97)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~   95 (97)
                      ............++..|+
T Consensus       236 ~~~~~~~~~~~~~t~~y~  253 (367)
T 3l9p_A          236 RAGYYRKGGCAMLPVKWM  253 (367)
T ss_dssp             HHSSCTTCCGGGSCGGGC
T ss_pred             cccccccCCCcCCcccEE
Confidence            433222222333344454

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.67  E-value=2.7e-16  Score=96.78  Aligned_cols=74  Identities=14%  Similarity=0.196  Sum_probs=63.7

Q ss_pred             CCCCCHHHHHhhccc----------------------ccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCC
Q 038072            3 SSGVNFYNHSKKSAK----------------------ILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKD   60 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~----------------------~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~   60 (97)
                      +.|++|.+++.....                      .+++..+..++.|++.|+.|+|+++++|+|++++||++    +
T Consensus       131 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll----~  206 (344)
T 1rjb_A          131 CCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV----T  206 (344)
T ss_dssp             CTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEE----E
T ss_pred             CCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEE----c
Confidence            357899999986532                      27899999999999999999999999999999999999    6


Q ss_pred             CCceEEEeecCceeeeccCC
Q 038072           61 AGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus        61 ~~~~~~i~dfg~a~~~~~~~   80 (97)
                      .+..++|+|||++.......
T Consensus       207 ~~~~~kL~Dfg~~~~~~~~~  226 (344)
T 1rjb_A          207 HGKVVKICDFGLARDIMSDS  226 (344)
T ss_dssp             TTTEEEECCCGGGSCGGGCT
T ss_pred             CCCcEEeCCCccCcccccCc
Confidence            67899999999998765543

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.67  E-value=1.4e-16  Score=98.51  Aligned_cols=74  Identities=19%  Similarity=0.241  Sum_probs=64.7

Q ss_pred             CCCCCCCHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCc--eEEEeecCceeeec
Q 038072            1 MASSGVNFYNHSKKS-AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGF--MAKIVARGDKCLHE   77 (97)
Q Consensus         1 m~~~g~~l~~~l~~~-~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~--~~~i~dfg~a~~~~   77 (97)
                      |+..|++|.+++... ...+++..+..++.|++.|+.|+|+++++|+|++++||++    ..+.  .++|+|||+++...
T Consensus       137 ~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~----~~~~~~~~kl~Dfg~a~~~~  212 (352)
T 2jii_A          137 LPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFV----DPEDQSQVTLAGYGFAFRYC  212 (352)
T ss_dssp             EECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEE----ETTEEEEEEECCGGGCBCSS
T ss_pred             ecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEE----cCCCCceEEEecCcceeecc
Confidence            455689999999875 3459999999999999999999999999999999999999    4455  89999999998765


Q ss_pred             c
Q 038072           78 R   78 (97)
Q Consensus        78 ~   78 (97)
                      .
T Consensus       213 ~  213 (352)
T 2jii_A          213 P  213 (352)
T ss_dssp             G
T ss_pred             C
Confidence            4

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.67  E-value=2.3e-16  Score=96.95  Aligned_cols=72  Identities=14%  Similarity=0.087  Sum_probs=63.2

Q ss_pred             CCCCCHHHHHhhcc-----------------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCC
Q 038072            3 SSGVNFYNHSKKSA-----------------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGK   59 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-----------------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~   59 (97)
                      +.|++|.+++....                       ..+++..+..++.|++.++.|+|+++++|+|++++||++    
T Consensus       132 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~----  207 (343)
T 1luf_A          132 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV----  207 (343)
T ss_dssp             CTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----
T ss_pred             CCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE----
Confidence            35789999987642                       458999999999999999999999999999999999999    


Q ss_pred             CCCceEEEeecCceeeecc
Q 038072           60 DAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        60 ~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.+..++|+|||+++....
T Consensus       208 ~~~~~~kl~Dfg~~~~~~~  226 (343)
T 1luf_A          208 GENMVVKIADFGLSRNIYS  226 (343)
T ss_dssp             CGGGCEEECCCSCHHHHTG
T ss_pred             CCCCeEEEeecCCCccccc
Confidence            7778999999999976543

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.67  E-value=4.8e-16  Score=95.49  Aligned_cols=76  Identities=24%  Similarity=0.325  Sum_probs=64.0

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.|++|.+++... ..+++..+..++.|++.|+.|+|+++++|+|++++||++.........++|+|||++......
T Consensus        96 ~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~  171 (326)
T 2y0a_A           96 VAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG  171 (326)
T ss_dssp             CCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTT
T ss_pred             CCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCC
Confidence            3589999999875 459999999999999999999999999999999999999432122337999999999876543

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.67  E-value=7.1e-16  Score=92.04  Aligned_cols=72  Identities=19%  Similarity=0.202  Sum_probs=65.2

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .|++|.+++......+++..+..++.|++.++.++|+++++|+|++++||++    +.+..++|+|||++......
T Consensus        86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~----~~~~~~~l~Dfg~~~~~~~~  157 (268)
T 3sxs_A           86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV----DRDLCVKVSDFGMTRYVLDD  157 (268)
T ss_dssp             TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEE----CTTCCEEECCTTCEEECCTT
T ss_pred             CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEE----CCCCCEEEccCccceecchh
Confidence            4789999998765669999999999999999999999999999999999999    77889999999999876544

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.67  E-value=5.4e-16  Score=101.65  Aligned_cols=73  Identities=22%  Similarity=0.211  Sum_probs=64.6

Q ss_pred             CCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.||+|.+++.... ..+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..++|+|||+++.....
T Consensus       266 ~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILl----d~~g~vKL~DFGla~~~~~~  339 (576)
T 2acx_A          266 MNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL----DDHGHIRISDLGLAVHVPEG  339 (576)
T ss_dssp             CCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTSCEEECCCTTCEECCTT
T ss_pred             CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEE----eCCCCeEEEecccceecccC
Confidence            34899999987653 339999999999999999999999999999999999999    77789999999999876543

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.67  E-value=1.7e-16  Score=101.62  Aligned_cols=72  Identities=22%  Similarity=0.276  Sum_probs=59.1

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      |+..++++.+.+..   .+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..+||+|||+++.....
T Consensus       146 ~E~~~~~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll----~~~~~~kl~DFG~a~~~~~~  217 (464)
T 3ttj_A          146 MELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTAGTS  217 (464)
T ss_dssp             EECCSEEHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEECCCCCC-----C
T ss_pred             EeCCCCCHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEE----eCCCCEEEEEEEeeeecCCC
Confidence            34556777777754   38999999999999999999999999999999999999    77889999999999876543

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.67  E-value=8.5e-17  Score=98.94  Aligned_cols=73  Identities=15%  Similarity=0.111  Sum_probs=58.5

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH-HcCccccCCCCCcEEEeeCCC----------------CCceEE
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIH-SHGVAHCGIKLDNILLVPGKD----------------AGFMAK   66 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h-~~~~~~~~l~~~~i~~~~~~~----------------~~~~~~   66 (97)
                      .+|++.+.+.+  +.+++..++.++.|++.|+.|+| +++++|||+||+||++.....                ....+|
T Consensus       145 ~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vk  222 (336)
T 2vuw_A          145 FGGIDLEQMRT--KLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVS  222 (336)
T ss_dssp             CCCEETGGGTT--TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEE
T ss_pred             CCCccHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEE
Confidence            35655555543  44899999999999999999999 999999999999999954210                123899


Q ss_pred             EeecCceeeecc
Q 038072           67 IVARGDKCLHER   78 (97)
Q Consensus        67 i~dfg~a~~~~~   78 (97)
                      |+|||+|+....
T Consensus       223 L~DFG~a~~~~~  234 (336)
T 2vuw_A          223 IIDYTLSRLERD  234 (336)
T ss_dssp             ECCCTTCBEEET
T ss_pred             EeeccccEecCC
Confidence            999999987654

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.67  E-value=7.8e-16  Score=94.59  Aligned_cols=89  Identities=17%  Similarity=0.133  Sum_probs=70.4

Q ss_pred             CCCCCHHHHHhhcc---------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEE
Q 038072            3 SSGVNFYNHSKKSA---------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKI   67 (97)
Q Consensus         3 ~~g~~l~~~l~~~~---------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i   67 (97)
                      +.|++|.+++....               ..+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|
T Consensus       123 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~~kL  198 (334)
T 2pvf_A          123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV----TENNVMKI  198 (334)
T ss_dssp             CTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEE
T ss_pred             CCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEE----cCCCCEEE
Confidence            34789999998643               238899999999999999999999999999999999999    77788999


Q ss_pred             eecCceeeeccCCcceeeccccCccccc
Q 038072           68 VARGDKCLHERHGLLNVTGVGEGQVADI   95 (97)
Q Consensus        68 ~dfg~a~~~~~~~~~~~~~~~~~~~~~~   95 (97)
                      +|||++..............+.++..|+
T Consensus       199 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~  226 (334)
T 2pvf_A          199 ADFGLARDINNIDYYKKTTNGRLPVKWM  226 (334)
T ss_dssp             CCCTTCEECTTTSSEECCSCCCCCGGGC
T ss_pred             ccccccccccccccccccCCCCccccee
Confidence            9999998776544333333334444454

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.67  E-value=6.5e-17  Score=102.18  Aligned_cols=73  Identities=18%  Similarity=0.177  Sum_probs=61.7

Q ss_pred             CCCCCCHHHHHhh------cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            2 ASSGVNFYNHSKK------SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         2 ~~~g~~l~~~l~~------~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      +..+++|.++++.      ....+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..+||+|||+++.
T Consensus       185 ~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl----~~~~~~kL~DFG~a~~  260 (413)
T 3dzo_A          185 PRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL----DQRGGVFLTGFEHLVR  260 (413)
T ss_dssp             ECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----CTTCCEEECCGGGCEE
T ss_pred             ehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEE----ecCCeEEEEeccceee
Confidence            4567889988852      23447888999999999999999999999999999999999    7777899999999876


Q ss_pred             ecc
Q 038072           76 HER   78 (97)
Q Consensus        76 ~~~   78 (97)
                      ...
T Consensus       261 ~~~  263 (413)
T 3dzo_A          261 DGA  263 (413)
T ss_dssp             TTE
T ss_pred             cCC
Confidence            543

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.67  E-value=3.2e-16  Score=95.83  Aligned_cols=74  Identities=16%  Similarity=0.159  Sum_probs=63.8

Q ss_pred             CCCCCCCHHHHHhhcc-----cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            1 MASSGVNFYNHSKKSA-----KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~-----~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      |+...++|.+++....     ..+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..++|+|||+++.
T Consensus        82 ~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~----~~~~~~kl~Dfg~~~~  157 (317)
T 2pmi_A           82 FEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLI----NKRGQLKLGDFGLARA  157 (317)
T ss_dssp             EECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCSSCEE
T ss_pred             EEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEE----cCCCCEEECcCcccee
Confidence            3455679999887642     348999999999999999999999999999999999999    7778899999999987


Q ss_pred             ecc
Q 038072           76 HER   78 (97)
Q Consensus        76 ~~~   78 (97)
                      ...
T Consensus       158 ~~~  160 (317)
T 2pmi_A          158 FGI  160 (317)
T ss_dssp             TTS
T ss_pred             cCC
Confidence            653

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.67  E-value=5.3e-16  Score=96.63  Aligned_cols=75  Identities=20%  Similarity=0.315  Sum_probs=63.4

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.|++|.+++... ..+++..+..++.|++.|+.|+|+++++|+|++++||++... .....++|+|||++......
T Consensus       110 ~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~-~~~~~~kl~DfG~a~~~~~~  184 (362)
T 2bdw_A          110 VTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASK-AKGAAVKLADFGLAIEVNDS  184 (362)
T ss_dssp             CCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCS-STTCCEEECCCTTCBCCTTC
T ss_pred             CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecC-CCCCCEEEeecCcceEecCC
Confidence            3578999998875 459999999999999999999999999999999999999432 22356999999999876543

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.66  E-value=6.9e-17  Score=100.61  Aligned_cols=73  Identities=12%  Similarity=0.063  Sum_probs=61.0

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHH------HHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCcee
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEV------RRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKC   74 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~------~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~   74 (97)
                      |+..+++|.+++...+..+.+...      ..++.|++.|+.|+|+++++|+|+|++||++    +.+..+||+|||+++
T Consensus       167 ~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll----~~~~~~kL~DFG~a~  242 (371)
T 3q60_A          167 MPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFI----MPDGRLMLGDVSALW  242 (371)
T ss_dssp             ECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEE----CTTSCEEECCGGGEE
T ss_pred             ecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEE----CCCCCEEEEecceee
Confidence            455668999999875444555555      5667999999999999999999999999999    777889999999998


Q ss_pred             eec
Q 038072           75 LHE   77 (97)
Q Consensus        75 ~~~   77 (97)
                      ...
T Consensus       243 ~~~  245 (371)
T 3q60_A          243 KVG  245 (371)
T ss_dssp             ETT
T ss_pred             ecC
Confidence            654

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.66  E-value=2.9e-16  Score=100.97  Aligned_cols=82  Identities=34%  Similarity=0.398  Sum_probs=68.8

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcce
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLN   83 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~~   83 (97)
                      .|++|.+++... +.+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||++....... ..
T Consensus        99 ~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll----~~~~~vkL~DFG~a~~~~~~~-~~  172 (476)
T 2y94_A           99 SGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL----DAHMNAKIADFGLSNMMSDGE-FL  172 (476)
T ss_dssp             SSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEE----CTTCCEEECCCSSCEECCTTC-CB
T ss_pred             CCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEE----ecCCCeEEEeccchhhccccc-cc
Confidence            489999999875 559999999999999999999999999999999999999    777889999999998765433 22


Q ss_pred             eeccccCc
Q 038072           84 VTGVGEGQ   91 (97)
Q Consensus        84 ~~~~~~~~   91 (97)
                      .+.+|++.
T Consensus       173 ~~~~gt~~  180 (476)
T 2y94_A          173 RTSCGSPN  180 (476)
T ss_dssp             CCCCSCST
T ss_pred             cccCCCcC
Confidence            33445443

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.66  E-value=1.1e-16  Score=98.89  Aligned_cols=75  Identities=20%  Similarity=0.165  Sum_probs=63.8

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+..|++|.+++...+ .+++..+..++.|++.|+.|+|+++++|+|++++||++..  .....++|+|||+++....
T Consensus       131 ~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~~~~kL~Dfg~a~~~~~  205 (345)
T 2v62_A          131 MERLGIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGY--KNPDQVYLADYGLSYRYCP  205 (345)
T ss_dssp             EECEEEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEES--SSTTSEEECCCTTCEESSG
T ss_pred             EeccCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEcc--CCCCcEEEEeCCCceeccc
Confidence            3445889999998763 6999999999999999999999999999999999999943  1123899999999987653

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.66  E-value=3.8e-16  Score=97.20  Aligned_cols=71  Identities=27%  Similarity=0.312  Sum_probs=58.6

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++... +.+++..+..++.|++.|+.|+|+++++|+|+|++||++..  .....++|+|||+++...
T Consensus        99 ~~~~L~~~l~~~-~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~--~~~~~~kl~Dfg~a~~~~  169 (361)
T 3uc3_A           99 SGGELYERICNA-GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDG--SPAPRLKICDFGYSKSSV  169 (361)
T ss_dssp             CSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECS--SSSCCEEECCCCCC----
T ss_pred             CCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcC--CCCceEEEeecCcccccc
Confidence            488999999876 45999999999999999999999999999999999999932  122359999999997543

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.66  E-value=5.5e-16  Score=93.81  Aligned_cols=74  Identities=18%  Similarity=0.176  Sum_probs=65.6

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      +.|++|.+++......+++..+..++.|++.++.++|+++++|+|++++||++    +.+..++|+|||++.......
T Consensus       107 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~----~~~~~~kl~Dfg~~~~~~~~~  180 (302)
T 4e5w_A          107 LPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV----ESEHQVKIGDFGLTKAIETDK  180 (302)
T ss_dssp             CTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----EETTEEEECCCTTCEECCTTC
T ss_pred             CCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEE----cCCCCEEECcccccccccCCC
Confidence            34789999997765669999999999999999999999999999999999999    556789999999998776543

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.66  E-value=3.8e-16  Score=97.36  Aligned_cols=72  Identities=24%  Similarity=0.314  Sum_probs=64.4

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+..|++|.+++..  ..+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..+||+|||+++....
T Consensus       109 ~e~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~a~~~~~  180 (367)
T 1cm8_A          109 MPFMGTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV----NEDCELKILDFGLARQADS  180 (367)
T ss_dssp             EECCSEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEECCS
T ss_pred             EecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEE----cCCCCEEEEeeeccccccc
Confidence            35568899999886  459999999999999999999999999999999999999    7778899999999987553

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.66  E-value=5e-16  Score=95.96  Aligned_cols=73  Identities=18%  Similarity=0.185  Sum_probs=64.7

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      |+..+++|.+.+......+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||+++...
T Consensus       103 ~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~----~~~~~~kl~Dfg~a~~~~  175 (351)
T 3mi9_A          103 FDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI----TRDGVLKLADFGLARAFS  175 (351)
T ss_dssp             EECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECC
T ss_pred             EeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE----cCCCCEEEccchhccccc
Confidence            3455678888887765669999999999999999999999999999999999999    777899999999998765

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.66  E-value=6.7e-16  Score=96.52  Aligned_cols=75  Identities=21%  Similarity=0.280  Sum_probs=64.7

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      .|++|.+++......+++..+..++.|++.|+.|+|+++++|+|++++||++..  .....++|+|||+++......
T Consensus       169 ~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~~~~kl~DFG~a~~~~~~~  243 (373)
T 2x4f_A          169 DGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN--RDAKQIKIIDFGLARRYKPRE  243 (373)
T ss_dssp             TTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEE--TTTTEEEECCCSSCEECCTTC
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEec--CCCCcEEEEeCCCceecCCcc
Confidence            478999988776566999999999999999999999999999999999999853  345689999999998776543

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.66  E-value=6e-16  Score=93.57  Aligned_cols=72  Identities=14%  Similarity=0.162  Sum_probs=64.5

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++......+++..+..++.|++.++.++|+++++|+|++++||++    +.+..++|+|||+++....
T Consensus       109 ~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~----~~~~~~kl~Dfg~a~~~~~  180 (298)
T 3f66_A          109 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMYD  180 (298)
T ss_dssp             CTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CTTCCEEECSCGGGCCCSC
T ss_pred             CCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE----CCCCCEEECcccccccccc
Confidence            35789999998765668999999999999999999999999999999999999    7778999999999986543

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.66  E-value=1.3e-16  Score=98.55  Aligned_cols=75  Identities=21%  Similarity=0.265  Sum_probs=65.3

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      |+...++|.+++......+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||+++.....
T Consensus        91 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~----~~~~~~kl~Dfg~a~~~~~~  165 (346)
T 1ua2_A           91 FDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL----DENGVLKLADFGLAKSFGSP  165 (346)
T ss_dssp             EECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTCCEEECCCGGGSTTTSC
T ss_pred             EEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEE----cCCCCEEEEecccceeccCC
Confidence            3455678999888765669999999999999999999999999999999999999    77788999999999866443

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.66  E-value=7e-16  Score=95.51  Aligned_cols=78  Identities=18%  Similarity=0.294  Sum_probs=64.6

Q ss_pred             CCCCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCC--------------------
Q 038072            1 MASSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGK--------------------   59 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~--------------------   59 (97)
                      |+..|++|.+++.... ..+++..+..++.|++.|+.|+|+++++|+|+|++||++....                    
T Consensus       115 ~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  194 (360)
T 3llt_A          115 FEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIY  194 (360)
T ss_dssp             ECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEE
T ss_pred             EcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhccccccccccc
Confidence            4566899999998753 3489999999999999999999999999999999999994210                    


Q ss_pred             -CCCceEEEeecCceeeecc
Q 038072           60 -DAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        60 -~~~~~~~i~dfg~a~~~~~   78 (97)
                       .....++|+|||++.....
T Consensus       195 ~~~~~~~kl~DFG~a~~~~~  214 (360)
T 3llt_A          195 RTKSTGIKLIDFGCATFKSD  214 (360)
T ss_dssp             EESCCCEEECCCTTCEETTS
T ss_pred             ccCCCCEEEEeccCceecCC
Confidence             1266799999999986443

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.66  E-value=7e-16  Score=93.23  Aligned_cols=72  Identities=24%  Similarity=0.272  Sum_probs=63.9

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH--------HcCccccCCCCCcEEEeeCCCCCceEEEeecCcee
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIH--------SHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKC   74 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h--------~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~   74 (97)
                      +.+++|.++++.  ..+++..+..++.|++.|+.|+|        +.+++|+|+|++||++    +.+..++|+|||+++
T Consensus        88 ~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill----~~~~~~kl~Dfg~a~  161 (301)
T 3q4u_A           88 HEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV----KKNGQCCIADLGLAV  161 (301)
T ss_dssp             CTTCBHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEE----CTTSCEEECCCTTCE
T ss_pred             ccCCCHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEE----cCCCCEEEeeCCCee
Confidence            357899999965  45999999999999999999999        9999999999999999    777899999999998


Q ss_pred             eeccCC
Q 038072           75 LHERHG   80 (97)
Q Consensus        75 ~~~~~~   80 (97)
                      ......
T Consensus       162 ~~~~~~  167 (301)
T 3q4u_A          162 MHSQST  167 (301)
T ss_dssp             EEETTT
T ss_pred             eccccc
Confidence            766543

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.65  E-value=1.3e-15  Score=93.99  Aligned_cols=71  Identities=20%  Similarity=0.326  Sum_probs=63.5

Q ss_pred             CCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            5 GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         5 g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      |.+|.+++... ..+++..+..++.|++.++.|+|+++++|+|+|++||++    +.+..++|+|||++.......
T Consensus       114 g~~l~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll----~~~~~~kL~Dfg~a~~~~~~~  184 (335)
T 3dls_A          114 GLDLFAFIDRH-PRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI----AEDFTIKLIDFGSAAYLERGK  184 (335)
T ss_dssp             SCBHHHHHHTC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTSCEEECCCTTCEECCTTC
T ss_pred             CccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEE----cCCCcEEEeecccceECCCCC
Confidence            44999999876 459999999999999999999999999999999999999    777899999999998766543

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.65  E-value=6.7e-16  Score=93.20  Aligned_cols=71  Identities=13%  Similarity=0.182  Sum_probs=64.1

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.+++|.+++......+++..+..++.|++.++.|+|+++++|+|++++||++    +.+..++|+|||+++...
T Consensus       105 ~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili----~~~~~~kl~Dfg~~~~~~  175 (298)
T 3pls_A          105 MCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML----DESFTVKVADFGLARDIL  175 (298)
T ss_dssp             CTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CTTCCEEECCTTSSCTTT
T ss_pred             ccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE----cCCCcEEeCcCCCccccc
Confidence            45899999998765668999999999999999999999999999999999999    777899999999997543

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.65  E-value=6.3e-16  Score=95.82  Aligned_cols=87  Identities=22%  Similarity=0.257  Sum_probs=66.7

Q ss_pred             CCCCCHHHHHhhc---ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKS---AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~---~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.|++|.+.+...   ...+++..+..++.|++.|+.|+|+++++|+|+|++||++... .....++|+|||++......
T Consensus       108 ~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~-~~~~~vkl~Dfg~a~~~~~~  186 (351)
T 3c0i_A          108 MDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASK-ENSAPVKLGGFGVAIQLGES  186 (351)
T ss_dssp             CSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSS-STTCCEEECCCTTCEECCTT
T ss_pred             CCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecC-CCCCcEEEecCcceeEecCC
Confidence            4578998877653   1248999999999999999999999999999999999999432 22345999999999887654


Q ss_pred             CcceeeccccC
Q 038072           80 GLLNVTGVGEG   90 (97)
Q Consensus        80 ~~~~~~~~~~~   90 (97)
                      ........|++
T Consensus       187 ~~~~~~~~gt~  197 (351)
T 3c0i_A          187 GLVAGGRVGTP  197 (351)
T ss_dssp             SCBCCCCCSCG
T ss_pred             CeeecCCcCCc
Confidence            43333334443

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.65  E-value=9.6e-16  Score=93.97  Aligned_cols=72  Identities=24%  Similarity=0.244  Sum_probs=64.0

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      +.|++|.+++..  ..+++..+..++.|++.|+.|+|+.+++|+|++++||++    +.+..++|+|||++.......
T Consensus       124 ~~~~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~~~~~~~~~  195 (321)
T 2c30_A          124 LQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL----TLDGRVKLSDFGFCAQISKDV  195 (321)
T ss_dssp             CCSCBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTCCEEECCCTTCEECCSSS
T ss_pred             CCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----CCCCcEEEeeeeeeeecccCc
Confidence            358899999875  459999999999999999999999999999999999999    677889999999998766543

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.65  E-value=3.8e-16  Score=95.11  Aligned_cols=72  Identities=26%  Similarity=0.417  Sum_probs=62.4

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |++.+++|.+++... ..+++..+..++.|++.|+.|+|+++++|+|++++||++.     +..++|+|||++.....
T Consensus       107 ~e~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-----~~~~kL~Dfg~~~~~~~  178 (313)
T 3cek_A          107 MECGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-----DGMLKLIDFGIANQMQP  178 (313)
T ss_dssp             ECCCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-----TTEEEECCCSSSCC---
T ss_pred             EecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-----CCeEEEeeccccccccC
Confidence            567789999999876 4599999999999999999999999999999999999993     36799999999987654

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.65  E-value=5.8e-16  Score=94.49  Aligned_cols=72  Identities=11%  Similarity=0.076  Sum_probs=62.4

Q ss_pred             CCCCHHHHHhhcc---------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCcee
Q 038072            4 SGVNFYNHSKKSA---------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKC   74 (97)
Q Consensus         4 ~g~~l~~~l~~~~---------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~   74 (97)
                      .|++|.+++....         ..+++..+..++.|++.|+.++|+++++|+|++++||++    ..+..++|+|||+++
T Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli----~~~~~~kl~Dfg~~~  186 (322)
T 1p4o_A          111 TRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMTR  186 (322)
T ss_dssp             TTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE----CTTCCEEECCTTCCC
T ss_pred             CCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEE----cCCCeEEECcCcccc
Confidence            4789999987632         236899999999999999999999999999999999999    677889999999998


Q ss_pred             eeccC
Q 038072           75 LHERH   79 (97)
Q Consensus        75 ~~~~~   79 (97)
                      .....
T Consensus       187 ~~~~~  191 (322)
T 1p4o_A          187 DIYET  191 (322)
T ss_dssp             GGGGG
T ss_pred             ccccc
Confidence            65443

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.65  E-value=4.9e-16  Score=94.38  Aligned_cols=73  Identities=18%  Similarity=0.242  Sum_probs=63.8

Q ss_pred             CCCCHHHHHhhccc-----------------ccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEE
Q 038072            4 SGVNFYNHSKKSAK-----------------ILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAK   66 (97)
Q Consensus         4 ~g~~l~~~l~~~~~-----------------~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~   66 (97)
                      .|++|.+++.....                 .+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++
T Consensus       110 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~k  185 (313)
T 1t46_A          110 CYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL----THGRITK  185 (313)
T ss_dssp             TTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----ETTTEEE
T ss_pred             CCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEE----cCCCCEE
Confidence            47899999886532                 38999999999999999999999999999999999999    6678899


Q ss_pred             EeecCceeeeccCC
Q 038072           67 IVARGDKCLHERHG   80 (97)
Q Consensus        67 i~dfg~a~~~~~~~   80 (97)
                      |+|||++.......
T Consensus       186 l~Dfg~~~~~~~~~  199 (313)
T 1t46_A          186 ICDFGLARDIKNDS  199 (313)
T ss_dssp             ECCCGGGSCTTSCT
T ss_pred             Eccccccccccccc
Confidence            99999998765543

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.65  E-value=4e-16  Score=96.73  Aligned_cols=74  Identities=27%  Similarity=0.271  Sum_probs=64.7

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+...|+|.+++......+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||++.....
T Consensus       133 ~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~~kL~DfG~a~~~~~  206 (348)
T 1u5q_A          133 MEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL----SEPGLVKLGDFGSASIMAP  206 (348)
T ss_dssp             EECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEE----ETTTEEEECCCTTCBSSSS
T ss_pred             EecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE----CCCCCEEEeeccCceecCC
Confidence            3455678888887655669999999999999999999999999999999999999    6678999999999976554

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.65  E-value=8e-16  Score=94.35  Aligned_cols=69  Identities=14%  Similarity=0.110  Sum_probs=62.0

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---------CccccCCCCCcEEEeeCCCCCceEEEeecCcee
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSH---------GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKC   74 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~---------~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~   74 (97)
                      .|++|.+++...  ..++..+..++.|++.|+.|+|+.         +++|+|+|++||++    ..+..++|+|||+++
T Consensus        95 ~~g~L~~~l~~~--~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill----~~~~~~kL~DFG~a~  168 (336)
T 3g2f_A           95 PNGSLXKYLSLH--TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV----KNDGTCVISDFGLSM  168 (336)
T ss_dssp             TTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEE----CTTSCEEECCCTTCE
T ss_pred             CCCcHHHHHhhc--ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEE----cCCCcEEEeecccee
Confidence            488999999774  368899999999999999999999         99999999999999    677899999999998


Q ss_pred             eecc
Q 038072           75 LHER   78 (97)
Q Consensus        75 ~~~~   78 (97)
                      ....
T Consensus       169 ~~~~  172 (336)
T 3g2f_A          169 RLTG  172 (336)
T ss_dssp             ECSS
T ss_pred             eccc
Confidence            7654

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.65  E-value=3.7e-16  Score=94.99  Aligned_cols=74  Identities=18%  Similarity=0.144  Sum_probs=63.8

Q ss_pred             CCCCCHHHHHhhcccc---------------cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEE
Q 038072            3 SSGVNFYNHSKKSAKI---------------LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKI   67 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~---------------l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i   67 (97)
                      +.|++|.+++......               +++..+..++.|++.|+.|+|+++++|+|++++||++    ..+..++|
T Consensus       114 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~----~~~~~~kl  189 (316)
T 2xir_A          114 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL----SEKNVVKI  189 (316)
T ss_dssp             CTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGCEEE
T ss_pred             CCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEE----CCCCCEEE
Confidence            3478999999875322               7899999999999999999999999999999999999    66788999


Q ss_pred             eecCceeeeccCC
Q 038072           68 VARGDKCLHERHG   80 (97)
Q Consensus        68 ~dfg~a~~~~~~~   80 (97)
                      +|||+++......
T Consensus       190 ~Dfg~~~~~~~~~  202 (316)
T 2xir_A          190 CDFGLARDIYKDP  202 (316)
T ss_dssp             CCCGGGSCTTTCT
T ss_pred             CCCccccccccCc
Confidence            9999998665433

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.65  E-value=6.5e-16  Score=96.61  Aligned_cols=72  Identities=14%  Similarity=0.171  Sum_probs=58.6

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++......+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..+||+|||+++....
T Consensus       173 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~~~~kL~DFG~a~~~~~  244 (373)
T 3c1x_A          173 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMYD  244 (373)
T ss_dssp             CTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTCCEEECCC--------
T ss_pred             CCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEE----CCCCCEEEeeccccccccc
Confidence            35789999998765668999999999999999999999999999999999999    7778999999999986543

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.65  E-value=5.6e-16  Score=94.93  Aligned_cols=74  Identities=18%  Similarity=0.183  Sum_probs=65.5

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      +.|++|.+++......+++..+..++.|++.++.|+|+++++|+|++++||++    +.+..++|+|||++.......
T Consensus       108 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~----~~~~~~kl~Dfg~~~~~~~~~  181 (327)
T 3lxl_A          108 LPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV----ESEAHVKIADFGLAKLLPLDK  181 (327)
T ss_dssp             CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----EETTEEEECCGGGCEECCTTC
T ss_pred             cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEE----CCCCCEEEcccccceecccCC
Confidence            34899999998765669999999999999999999999999999999999999    557789999999998765433

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.65  E-value=1.4e-15  Score=92.84  Aligned_cols=73  Identities=15%  Similarity=0.151  Sum_probs=62.9

Q ss_pred             CCCCCHHHHHhhccc--ccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKSAK--ILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~--~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.|++|.+++.....  ..++..+..++.|++.|+.|+|+++++|+|+|++||++    ..+..++|+|||+++.....
T Consensus       143 ~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~~kL~DfG~a~~~~~~  217 (332)
T 3qd2_B          143 CRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFF----TMDDVVKVGDFGLVTAMDQD  217 (332)
T ss_dssp             CCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEECSCC
T ss_pred             cCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEE----eCCCCEEEeecCcccccccc
Confidence            357899999987532  25677789999999999999999999999999999999    67789999999999876654

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.64  E-value=9e-16  Score=94.46  Aligned_cols=71  Identities=14%  Similarity=0.177  Sum_probs=60.4

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++......+++..+..++.|++.|+.++|+++++|+|++++||++    +.+..++|+|||+++....
T Consensus       129 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~----~~~~~~kl~Dfg~~~~~~~  199 (333)
T 1mqb_A          129 ENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV----NSNLVCKVSDFGLSRVLED  199 (333)
T ss_dssp             TTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTCCEEECCCCC------
T ss_pred             CCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEE----CCCCcEEECCCCcchhhcc
Confidence            4679999998765669999999999999999999999999999999999999    7778999999999987654

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.64  E-value=5.3e-16  Score=96.11  Aligned_cols=74  Identities=18%  Similarity=0.188  Sum_probs=61.6

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+..+++|.+.+......+++..+..++.|++.|+.|+|+++++|+|++++||++    ..+..++|+|||++.....
T Consensus       113 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~----~~~~~~kl~Dfg~~~~~~~  186 (362)
T 3pg1_A          113 TELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL----ADNNDITICDFNLAREDTA  186 (362)
T ss_dssp             EECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTCCEEECCTTC------
T ss_pred             EccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEE----cCCCCEEEEecCccccccc
Confidence            3556689999988765669999999999999999999999999999999999999    7778899999999975443

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.64  E-value=7.6e-16  Score=95.71  Aligned_cols=73  Identities=27%  Similarity=0.336  Sum_probs=64.5

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      |+..+++|.+++..  +.+++..+..++.|++.++.|+|+++++|+|++++||++    ..+..++|+|||++......
T Consensus       109 ~e~~~~~L~~~l~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~----~~~~~~kl~Dfg~a~~~~~~  181 (364)
T 3qyz_A          109 QDLMETDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL----NTTCDLKICDFGLARVADPD  181 (364)
T ss_dssp             EECCSEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEECCGG
T ss_pred             EcccCcCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEE----CCCCCEEEEeCcceEecCCC
Confidence            34566899999876  459999999999999999999999999999999999999    77788999999999876543

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.64  E-value=4.4e-16  Score=94.92  Aligned_cols=70  Identities=19%  Similarity=0.241  Sum_probs=60.0

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++... +.+++..+..++.|++.++.|+|+++++|+|++++||++    +.+..++|+|||+++....
T Consensus        99 ~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~----~~~~~~kl~Dfg~a~~~~~  168 (311)
T 3ork_A           99 DGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI----SATNAVKVMDFGIARAIAD  168 (311)
T ss_dssp             CEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----ETTSCEEECCCSCC-----
T ss_pred             CCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEE----cCCCCEEEeeccCcccccc
Confidence            478999999876 459999999999999999999999999999999999999    6677899999999986554

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.64  E-value=1.5e-15  Score=97.77  Aligned_cols=76  Identities=21%  Similarity=0.353  Sum_probs=64.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      +.|++|.+.+... ..+++..+..++.|++.|+.|+|+++++|+|+||+||++... .....++|+|||++.......
T Consensus       118 ~~~g~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~-~~~~~~kl~DfG~a~~~~~~~  193 (494)
T 3lij_A          118 YKGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESK-EKDALIKIVDFGLSAVFENQK  193 (494)
T ss_dssp             CCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCS-STTCCEEECCCTTCEECBTTB
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCC-CCCCcEEEEECCCCeECCCCc
Confidence            4578999988776 459999999999999999999999999999999999999432 224569999999998776543

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.64  E-value=2.5e-15  Score=91.16  Aligned_cols=72  Identities=25%  Similarity=0.262  Sum_probs=63.5

Q ss_pred             CCCCHHHHHhhcc--cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKKSA--KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~~~--~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .|++|.+++....  ..+++..+..++.|++.++.|+|+++++|+|++++||++    +.+..++|+|||++......
T Consensus       113 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili----~~~~~~kl~Dfg~~~~~~~~  186 (307)
T 2nru_A          113 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL----DEAFTAKISDFGLARASEKF  186 (307)
T ss_dssp             TTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----CTTCCEEECCCTTCEECCSC
T ss_pred             CCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEE----cCCCcEEEeecccccccccc
Confidence            4899999987532  348999999999999999999999999999999999999    77789999999999876543

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.64  E-value=8.9e-16  Score=96.44  Aligned_cols=77  Identities=26%  Similarity=0.356  Sum_probs=65.4

Q ss_pred             CCCCCHHHHHhhccc--ccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKSAK--ILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~--~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.|++|.+++.....  .+++..+..++.|++.|+.|+|+++++|+|+|++||++...++....++|+|||+++.....
T Consensus        91 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~  169 (396)
T 4eut_A           91 CPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD  169 (396)
T ss_dssp             CTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG
T ss_pred             CCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC
Confidence            347899999986532  28999999999999999999999999999999999998554456677999999999876543

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.64  E-value=3.9e-16  Score=94.52  Aligned_cols=71  Identities=23%  Similarity=0.281  Sum_probs=60.9

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      .+++|.+++..  ..+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||++.......
T Consensus       121 ~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~  191 (298)
T 2zv2_A          121 NQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV----GEDGHIKIADFGVSNEFKGSD  191 (298)
T ss_dssp             TTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTSCEEECCCTTCEECSSSS
T ss_pred             CCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE----CCCCCEEEecCCCcccccccc
Confidence            35677665443  459999999999999999999999999999999999999    677889999999998766543

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.64  E-value=6.8e-16  Score=92.74  Aligned_cols=71  Identities=11%  Similarity=0.117  Sum_probs=64.1

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++......+++..+..++.|++.++.++|+++++|+|++++||++    +.+..++|+|||++....
T Consensus       101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili----~~~~~~kl~Dfg~~~~~~  171 (283)
T 3gen_A          101 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV----NDQGVVKVSDFGLSRYVL  171 (283)
T ss_dssp             CTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE----CTTSCEEECSTTGGGGBC
T ss_pred             cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEE----cCCCCEEEcccccccccc
Confidence            34899999998755669999999999999999999999999999999999999    777889999999997553

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.64  E-value=3e-16  Score=96.41  Aligned_cols=77  Identities=16%  Similarity=0.163  Sum_probs=62.8

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCC-CCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGK-DAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~-~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+..+++|.+++... ..+++..+..++.|++.++.|+|+++++|+|+|++||++.... .....++|+|||+++....
T Consensus       112 ~e~~~~~L~~~~~~~-~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~  189 (329)
T 3gbz_A          112 FEYAENDLKKYMDKN-PDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI  189 (329)
T ss_dssp             EECCSEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-
T ss_pred             EecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCC
Confidence            455667999999876 4499999999999999999999999999999999999995422 2345699999999976543

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.64  E-value=6.7e-16  Score=92.26  Aligned_cols=71  Identities=11%  Similarity=0.098  Sum_probs=63.9

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++......+++..+..++.|++.++.++|+++++|+|++++||++    +.+..++|+|||++....
T Consensus        87 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~----~~~~~~kl~Dfg~~~~~~  157 (269)
T 4hcu_A           87 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV----GENQVIKVSDFGMTRFVL  157 (269)
T ss_dssp             CTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CGGGCEEECCTTGGGGBC
T ss_pred             CCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEE----cCCCCEEecccccccccc
Confidence            35789999998766669999999999999999999999999999999999999    667889999999997544

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.64  E-value=7.2e-16  Score=94.15  Aligned_cols=73  Identities=23%  Similarity=0.337  Sum_probs=58.6

Q ss_pred             CCCCCHHHHHhhccc--ccCHHHHHHHHHHHHHHHHHHHHcC--ccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAK--ILLEHEVRRYTRDILRGLDHIHSHG--VAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~--~l~~~~~~~~~~~i~~~l~~~h~~~--~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++.....  .+++..+..++.|++.++.|+|+++  ++|+|+|++||++    +.+..++|+|||+++....
T Consensus       116 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll----~~~~~~kL~Dfg~a~~~~~  191 (309)
T 3p86_A          116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV----DKKYTVKVCDFGLSRLKAS  191 (309)
T ss_dssp             CTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEE----CTTCCEEECCCC-------
T ss_pred             CCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEE----eCCCcEEECCCCCCccccc
Confidence            457899999987532  3899999999999999999999999  9999999999999    7788999999999986554


Q ss_pred             C
Q 038072           79 H   79 (97)
Q Consensus        79 ~   79 (97)
                      .
T Consensus       192 ~  192 (309)
T 3p86_A          192 T  192 (309)
T ss_dssp             -
T ss_pred             c
Confidence            3

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.64  E-value=1e-15  Score=91.73  Aligned_cols=71  Identities=27%  Similarity=0.374  Sum_probs=63.9

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.+++......+++..+..++.|++.++.|+|+++++|+|++++||++    +.+..++|+|||++.....
T Consensus        94 ~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili----~~~~~~kl~dfg~~~~~~~  164 (278)
T 3cok_A           94 HNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLL----TRNMNIKIADFGLATQLKM  164 (278)
T ss_dssp             TTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEE----CTTCCEEECCCTTCEECC-
T ss_pred             CCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----cCCCCEEEEeecceeeccC
Confidence            4789999998765669999999999999999999999999999999999999    6778899999999987654

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.64  E-value=4.7e-16  Score=102.49  Aligned_cols=72  Identities=15%  Similarity=0.131  Sum_probs=64.0

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++......+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..+||+|||+++....
T Consensus       417 ~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl----~~~~~vkL~DFGla~~~~~  488 (613)
T 2ozo_A          417 AGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLL----VNRHYAKISDFGLSKALGA  488 (613)
T ss_dssp             CTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----EETTEEEECCCSTTTTCC-
T ss_pred             CCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEE----cCCCcEEEeeccCcccccC
Confidence            45789999998765669999999999999999999999999999999999999    5577899999999986543

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.64  E-value=1.1e-15  Score=98.20  Aligned_cols=74  Identities=24%  Similarity=0.426  Sum_probs=63.5

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+.+... +.+++..+..++.|++.|+.|+|+++++|+|+||+||++... .....++|+|||+++....
T Consensus       103 ~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~-~~~~~~kl~Dfg~a~~~~~  176 (486)
T 3mwu_A          103 YTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESK-EKDCDIKIIDFGLSTCFQQ  176 (486)
T ss_dssp             CCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSS-STTCCEEECSCSCTTTBCC
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecC-CCCCCEEEEECCcCeECCC
Confidence            4688999988776 459999999999999999999999999999999999999432 2345799999999976544

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.64  E-value=1.4e-15  Score=92.50  Aligned_cols=72  Identities=11%  Similarity=0.066  Sum_probs=59.5

Q ss_pred             CCCCCHHHHHhh-----cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKK-----SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~-----~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.+++|.+++..     ....+++..+..++.|++.|+.|+|+++++|+|++++||++    ..+..++|+|||++....
T Consensus       123 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli----~~~~~~kl~Dfg~~~~~~  198 (313)
T 3brb_A          123 MKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCML----RDDMTVCVADFGLSKKIY  198 (313)
T ss_dssp             CTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEE----CTTSCEEECSCSCC----
T ss_pred             ccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE----cCCCcEEEeecCcceecc
Confidence            357899999853     22448999999999999999999999999999999999999    777889999999998665


Q ss_pred             c
Q 038072           78 R   78 (97)
Q Consensus        78 ~   78 (97)
                      .
T Consensus       199 ~  199 (313)
T 3brb_A          199 S  199 (313)
T ss_dssp             -
T ss_pred             c
Confidence            4

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.63  E-value=1.3e-15  Score=93.91  Aligned_cols=72  Identities=15%  Similarity=0.264  Sum_probs=63.6

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+..+++|.+++..  +.+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||++.....
T Consensus        93 ~e~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~----~~~~~~kl~Dfg~a~~~~~  164 (353)
T 2b9h_A           93 QELMQTDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI----NSNCDLKVCDFGLARIIDE  164 (353)
T ss_dssp             ECCCSEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----CTTCCEEECCCTTCEECC-
T ss_pred             EeccCccHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE----cCCCcEEEEeccccccccc
Confidence            45566889998876  459999999999999999999999999999999999999    7778899999999987653

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.63  E-value=1.1e-15  Score=91.90  Aligned_cols=72  Identities=17%  Similarity=0.102  Sum_probs=63.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++...+..+++..+..++.|++.++.++|+++++|+|++++||++    ..+..++|+|||++.....
T Consensus        94 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~  165 (281)
T 3cc6_A           94 YPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILV----ASPECVKLGDFGLSRYIED  165 (281)
T ss_dssp             CTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE----EETTEEEECCCCGGGCC--
T ss_pred             CCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEE----CCCCcEEeCccCCCccccc
Confidence            45789999998765669999999999999999999999999999999999999    5567899999999976554

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.63  E-value=1.3e-15  Score=91.80  Aligned_cols=73  Identities=15%  Similarity=0.130  Sum_probs=64.7

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.|++|.+++......+++..+..++.|++.++.++|+++++|+|++++||++    ..+..++|+|||++......
T Consensus        91 ~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili----~~~~~~kl~Dfg~~~~~~~~  163 (287)
T 1u59_A           91 AGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL----VNRHYAKISDFGLSKALGAD  163 (287)
T ss_dssp             CTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----EETTEEEECCCTTCEECTTC
T ss_pred             CCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEE----cCCCCEEECcccceeeeccC
Confidence            35789999997665669999999999999999999999999999999999999    55678999999999876543

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.63  E-value=1.2e-15  Score=95.46  Aligned_cols=77  Identities=21%  Similarity=0.217  Sum_probs=63.9

Q ss_pred             CCCCCCCHHHHHhh---cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            1 MASSGVNFYNHSKK---SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         1 m~~~g~~l~~~l~~---~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      |+...++|.+.+..   ....+++..+..++.|++.|+.|+|+++++|+|+|++||++.   ..+..++|+|||+++...
T Consensus       117 ~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~---~~~~~~kl~Dfg~a~~~~  193 (383)
T 3eb0_A          117 MEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVN---SKDNTLKLCDFGSAKKLI  193 (383)
T ss_dssp             ECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEE---TTTTEEEECCCTTCEECC
T ss_pred             EecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEc---CCCCcEEEEECCCCcccC
Confidence            45566788777763   235599999999999999999999999999999999999993   246789999999998765


Q ss_pred             cCC
Q 038072           78 RHG   80 (97)
Q Consensus        78 ~~~   80 (97)
                      ...
T Consensus       194 ~~~  196 (383)
T 3eb0_A          194 PSE  196 (383)
T ss_dssp             TTS
T ss_pred             CCC
Confidence            433

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.63  E-value=2.8e-15  Score=93.38  Aligned_cols=71  Identities=24%  Similarity=0.404  Sum_probs=64.0

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .|++|.+++... ..+++..+..++.|++.|+.|+|+.+++|+|++++||++    +.+..++++|||++......
T Consensus       183 ~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~----~~~~~ikl~DfG~~~~~~~~  253 (365)
T 2y7j_A          183 RKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL----DDNMQIRLSDFGFSCHLEPG  253 (365)
T ss_dssp             TTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCCTTCEECCTT
T ss_pred             CCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----CCCCCEEEEecCcccccCCC
Confidence            478999999875 459999999999999999999999999999999999999    77789999999999876653

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.63  E-value=1.3e-15  Score=96.40  Aligned_cols=75  Identities=25%  Similarity=0.297  Sum_probs=61.0

Q ss_pred             CCCCCCHHHHHhh---cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKK---SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~---~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +...+++.+.+..   .+..+++..++.++.|++.|+.|+|+++++|+|+|++||++.   .+...+||+|||+++....
T Consensus       133 e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~---~~~~~~kl~DFG~a~~~~~  209 (420)
T 1j1b_A          133 DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD---PDTAVLKLCDFGSAKQLVR  209 (420)
T ss_dssp             ECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEE---TTTTEEEECCCTTCEECCT
T ss_pred             hcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEe---CCCCeEEeccchhhhhccc
Confidence            4445667766553   235599999999999999999999999999999999999993   2346789999999987654


Q ss_pred             C
Q 038072           79 H   79 (97)
Q Consensus        79 ~   79 (97)
                      .
T Consensus       210 ~  210 (420)
T 1j1b_A          210 G  210 (420)
T ss_dssp             T
T ss_pred             C
Confidence            3

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.63  E-value=1.6e-15  Score=92.88  Aligned_cols=70  Identities=21%  Similarity=0.260  Sum_probs=61.9

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc--------CccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSH--------GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~--------~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      .|++|.++++.  ..+++..+..++.|++.|+.|+|++        +++|+|+|++||++    +.+..++|+|||+++.
T Consensus       118 ~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill----~~~~~~kl~Dfg~a~~  191 (337)
T 3mdy_A          118 ENGSLYDYLKS--TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV----KKNGTCCIADLGLAVK  191 (337)
T ss_dssp             TTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEE----CTTSCEEECCCTTCEE
T ss_pred             CCCcHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEE----CCCCCEEEEeCCCcee
Confidence            47899999976  3599999999999999999999998        99999999999999    7778999999999977


Q ss_pred             eccC
Q 038072           76 HERH   79 (97)
Q Consensus        76 ~~~~   79 (97)
                      ....
T Consensus       192 ~~~~  195 (337)
T 3mdy_A          192 FISD  195 (337)
T ss_dssp             CC--
T ss_pred             eccc
Confidence            6543

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.63  E-value=2.6e-15  Score=92.44  Aligned_cols=72  Identities=31%  Similarity=0.395  Sum_probs=64.1

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      .|++|.+++... ..+++..+..++.|++.++.|+|+++++|+|++++||++    +.+..++|+|||++.......
T Consensus       124 ~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~----~~~~~~kl~Dfg~~~~~~~~~  195 (335)
T 2owb_A          124 RRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL----NEDLEVKIGDFGLATKVEYDG  195 (335)
T ss_dssp             TTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----CTTCCEEECCCTTCEECCSTT
T ss_pred             CCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEE----cCCCCEEEeeccCceecccCc
Confidence            468999988875 459999999999999999999999999999999999999    677889999999998765433

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.63  E-value=1.2e-15  Score=93.23  Aligned_cols=72  Identities=25%  Similarity=0.235  Sum_probs=62.8

Q ss_pred             CCCCCHHHHHhhcc---cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSA---KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~---~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++....   ..+++..+..++.|++.++.|+|+++++|+|++++||++    +.+..++|+|||+++....
T Consensus       117 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~  191 (321)
T 2qkw_B          117 MENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILL----DENFVPKITDFGISKKGTE  191 (321)
T ss_dssp             CTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEE----CTTCCEEECCCTTCEECSS
T ss_pred             CCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEE----CCCCCEEEeeccccccccc
Confidence            34789999886542   248999999999999999999999999999999999999    7788999999999987543

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.63  E-value=2.3e-15  Score=97.09  Aligned_cols=75  Identities=24%  Similarity=0.351  Sum_probs=63.8

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.|++|.+++... +.+++..+..++.|++.|+.|+|+++++|+|++|+||++... .....++|+|||++......
T Consensus       128 ~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~-~~~~~~kl~Dfg~a~~~~~~  202 (504)
T 3q5i_A          128 YEGGELFEQIINR-HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENK-NSLLNIKIVDFGLSSFFSKD  202 (504)
T ss_dssp             CTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESST-TCCSSEEECCCTTCEECCTT
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecC-CCCccEEEEECCCCEEcCCC
Confidence            4578999998776 459999999999999999999999999999999999999432 22247999999999877654

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.63  E-value=5.7e-16  Score=98.04  Aligned_cols=74  Identities=22%  Similarity=0.367  Sum_probs=62.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++... +.+++..+..++.|++.|+.|+|+++++|+|+|++||++... .....+||+|||+++....
T Consensus       221 ~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~-~~~~~~kl~DFG~a~~~~~  294 (419)
T 3i6u_A          221 MEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ-EEDCLIKITDFGHSKILGE  294 (419)
T ss_dssp             CTTCBGGGGTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSS-SSSCCEEECCSSTTTSCC-
T ss_pred             CCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecC-CCcceEEEeecccceecCC
Confidence            3578999988765 459999999999999999999999999999999999999432 2244699999999987654

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.63  E-value=2.6e-15  Score=91.98  Aligned_cols=73  Identities=16%  Similarity=0.170  Sum_probs=65.3

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      .|++|.+++...+..+++..+..++.|++.++.++|+++++|+|++++||++    ..+..++|+|||++.......
T Consensus       127 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli----~~~~~~kL~Dfg~~~~~~~~~  199 (326)
T 2w1i_A          127 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV----ENENRVKIGDFGLTKVLPQDK  199 (326)
T ss_dssp             TTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----EETTEEEECCCTTCEECCSSC
T ss_pred             CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEE----cCCCcEEEecCcchhhccccc
Confidence            4789999998876669999999999999999999999999999999999999    556789999999998766543

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.63  E-value=1.7e-15  Score=96.13  Aligned_cols=73  Identities=29%  Similarity=0.496  Sum_probs=62.6

Q ss_pred             CCCCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCce--EEEeecCceeeec
Q 038072            1 MASSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFM--AKIVARGDKCLHE   77 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~--~~i~dfg~a~~~~   77 (97)
                      |+..+++|.+++.... ..+++..+..++.|++.|+.|+|+++++|+|+|++||++    .....  ++|+|||+++...
T Consensus       178 ~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl----~~~~~~~vkL~DFG~a~~~~  253 (429)
T 3kvw_A          178 FELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL----KQQGRSGIKVIDFGSSCYEH  253 (429)
T ss_dssp             ECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEE----SSTTSCCEEECCCTTCEETT
T ss_pred             EeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE----ccCCCcceEEeecccceecC
Confidence            4566789999988753 348999999999999999999999999999999999999    44443  9999999997644

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.62  E-value=2.4e-15  Score=92.03  Aligned_cols=75  Identities=24%  Similarity=0.354  Sum_probs=62.9

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .|++|.+++... ..+++..+..++.|++.|+.|+|+++++|+|++++||++.........++|+|||++......
T Consensus        98 ~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~  172 (321)
T 2a2a_A           98 SGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG  172 (321)
T ss_dssp             CSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTT
T ss_pred             CCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCcc
Confidence            478999999875 459999999999999999999999999999999999999432111227999999999876543

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.62  E-value=2e-15  Score=93.56  Aligned_cols=74  Identities=19%  Similarity=0.302  Sum_probs=58.6

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++... +.+++..+..++.|++.|+.|+|+.+++|+|++++||++... ..+..++|+|||+++....
T Consensus       130 ~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~-~~~~~~kl~Dfg~a~~~~~  203 (349)
T 2w4o_A          130 VTGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATP-APDAPLKIADFGLSKIVEH  203 (349)
T ss_dssp             CCSCBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSS-STTCCEEECCCC-------
T ss_pred             CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecC-CCCCCEEEccCccccccCc
Confidence            3578999999876 459999999999999999999999999999999999999432 2367899999999987654

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.62  E-value=6.8e-16  Score=94.64  Aligned_cols=73  Identities=16%  Similarity=0.241  Sum_probs=62.9

Q ss_pred             CCCCHHHHHhhcc-------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeec
Q 038072            4 SGVNFYNHSKKSA-------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVAR   70 (97)
Q Consensus         4 ~g~~l~~~l~~~~-------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~df   70 (97)
                      .|++|.+++....             ..+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+||
T Consensus       133 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~----~~~~~~kl~Df  208 (333)
T 2i1m_A          133 CYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL----TNGHVAKIGDF  208 (333)
T ss_dssp             TTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEE----EGGGEEEBCCC
T ss_pred             CCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEE----CCCCeEEECcc
Confidence            4789999987532             347999999999999999999999999999999999999    66788999999


Q ss_pred             CceeeeccCC
Q 038072           71 GDKCLHERHG   80 (97)
Q Consensus        71 g~a~~~~~~~   80 (97)
                      |++.......
T Consensus       209 g~~~~~~~~~  218 (333)
T 2i1m_A          209 GLARDIMNDS  218 (333)
T ss_dssp             GGGCCGGGCT
T ss_pred             cccccccccc
Confidence            9998665433

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.62  E-value=7.1e-16  Score=97.04  Aligned_cols=78  Identities=22%  Similarity=0.197  Sum_probs=61.2

Q ss_pred             CCCCCCCHHHHHhhcc--------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCc
Q 038072            1 MASSGVNFYNHSKKSA--------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGD   72 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~--------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~   72 (97)
                      |+..+++|.+++....        ..+++..++.++.|++.|+.|+|+++++|+|+|++||++.........++|+|||+
T Consensus        99 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~  178 (405)
T 3rgf_A           99 FDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF  178 (405)
T ss_dssp             EECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTC
T ss_pred             EeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCC
Confidence            4556778888876421        23899999999999999999999999999999999999954334567899999999


Q ss_pred             eeeecc
Q 038072           73 KCLHER   78 (97)
Q Consensus        73 a~~~~~   78 (97)
                      ++....
T Consensus       179 a~~~~~  184 (405)
T 3rgf_A          179 ARLFNS  184 (405)
T ss_dssp             CC----
T ss_pred             ceecCC
Confidence            987654

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.62  E-value=1.3e-15  Score=101.01  Aligned_cols=72  Identities=15%  Similarity=0.067  Sum_probs=64.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++...+..+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||+++....
T Consensus       472 ~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl----~~~~~vkL~DFG~a~~~~~  543 (656)
T 2j0j_A          472 CTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV----SSNDCVKLGDFGLSRYMED  543 (656)
T ss_dssp             CTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----EETTEEEECCCCCCCSCCC
T ss_pred             CCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEE----eCCCCEEEEecCCCeecCC
Confidence            35799999998765569999999999999999999999999999999999999    5567899999999987654

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.62  E-value=9.7e-16  Score=98.26  Aligned_cols=75  Identities=21%  Similarity=0.337  Sum_probs=64.6

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.|++|.+++... +.+++..+..++.|++.|+.|+|+++++|+|++|+||++... .....++|+|||++......
T Consensus       108 ~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~-~~~~~~kl~Dfg~a~~~~~~  182 (484)
T 3nyv_A          108 YTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESK-SKDANIRIIDFGLSTHFEAS  182 (484)
T ss_dssp             CCSCBHHHHHHTC-SCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSS-STTCCEEECCTTHHHHBCCC
T ss_pred             CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecC-CCCCcEEEEeeeeeEEcccc
Confidence            5689999998876 459999999999999999999999999999999999999432 34567999999999876543

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.62  E-value=3.7e-15  Score=93.27  Aligned_cols=72  Identities=15%  Similarity=0.090  Sum_probs=63.6

Q ss_pred             CCCCCHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKS-AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~-~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++... ...+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..++|+|||.+.....
T Consensus       108 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll----~~~~~~kl~dfg~~~~~~~  180 (389)
T 3gni_B          108 MAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI----SVDGKVYLSGLRSNLSMIS  180 (389)
T ss_dssp             CTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTCCEEECCGGGCEECEE
T ss_pred             cCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCCEEEcccccceeecc
Confidence            4579999998875 2449999999999999999999999999999999999999    7788999999999876543

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.62  E-value=2.7e-15  Score=89.97  Aligned_cols=72  Identities=21%  Similarity=0.126  Sum_probs=63.1

Q ss_pred             CCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .+++|.+++.... ..+++..+..++.|++.++.|+|+++++|+|++++||++    ..+..++|+|||++......
T Consensus       103 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~  175 (284)
T 2a19_B          103 DKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFL----VDTKQVKIGDFGLVTSLKND  175 (284)
T ss_dssp             CSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----EETTEEEECCCTTCEESSCC
T ss_pred             CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEE----cCCCCEEECcchhheecccc
Confidence            4679999997642 458999999999999999999999999999999999999    55678999999999876543

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.62  E-value=3e-15  Score=96.49  Aligned_cols=72  Identities=11%  Similarity=0.116  Sum_probs=63.9

Q ss_pred             CCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++.... ..+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..+||+|||+++....
T Consensus       298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll----~~~~~~kl~DFG~a~~~~~  370 (495)
T 1opk_A          298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLV----GENHLVKVADFGLSRLMTG  370 (495)
T ss_dssp             CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CGGGCEEECCTTCEECCTT
T ss_pred             cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEE----CCCCcEEEeecccceeccC
Confidence            34789999998742 448999999999999999999999999999999999999    7788999999999987654

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.62  E-value=2.5e-15  Score=90.44  Aligned_cols=73  Identities=18%  Similarity=0.205  Sum_probs=64.5

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.+++|.+++......+++..+..++.|++.++.++|+++++|+|++++||++    ..+..++|+|||++......
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili----~~~~~~kl~Dfg~~~~~~~~  174 (291)
T 1u46_A          102 APLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL----ATRDLVKIGDFGLMRALPQN  174 (291)
T ss_dssp             CTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----EETTEEEECCCTTCEECCC-
T ss_pred             ccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEE----cCCCCEEEcccccccccccc
Confidence            45789999998765669999999999999999999999999999999999999    55678999999999876543

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.62  E-value=2.5e-15  Score=91.75  Aligned_cols=74  Identities=23%  Similarity=0.274  Sum_probs=64.4

Q ss_pred             CCCCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+..+++|.+++.... ..+++..+..++.|++.++.|+|+++++|+|++++||++    ..+..++|+|||++.....
T Consensus        98 ~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili----~~~~~~kl~Dfg~~~~~~~  172 (326)
T 1blx_A           98 FEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV----TSSGQIKLADFGLARIYSF  172 (326)
T ss_dssp             EECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTCCEEECSCCSCCCCCG
T ss_pred             EecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEE----cCCCCEEEecCcccccccC
Confidence            3455679999988753 348999999999999999999999999999999999999    6778999999999986554

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.62  E-value=4.5e-15  Score=89.64  Aligned_cols=72  Identities=31%  Similarity=0.395  Sum_probs=63.9

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      .|++|.+++... ..+++..+..++.|++.++.|+|+++++|+|++++||++    +.+..++|+|||++.......
T Consensus        98 ~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~kl~dfg~~~~~~~~~  169 (294)
T 2rku_A           98 RRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL----NEDLEVKIGDFGLATKVEYDG  169 (294)
T ss_dssp             TTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEECCSTT
T ss_pred             CCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEE----cCCCCEEEEeccCceecccCc
Confidence            468999988775 459999999999999999999999999999999999999    777889999999998765433

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.62  E-value=5.1e-15  Score=88.70  Aligned_cols=74  Identities=19%  Similarity=0.329  Sum_probs=63.9

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .|++|.+++... ..+++..+..++.|++.++.|+|+++++|+|++++||++... ..+..++|+|||++......
T Consensus        89 ~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~-~~~~~~~l~Dfg~~~~~~~~  162 (277)
T 3f3z_A           89 TGGELFERVVHK-RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTD-SPDSPLKLIDFGLAARFKPG  162 (277)
T ss_dssp             CSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSS-STTCCEEECCCTTCEECCTT
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecC-CCCCcEEEEecccceeccCc
Confidence            478999988876 459999999999999999999999999999999999998432 34677999999999876653

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.61  E-value=1.3e-15  Score=95.00  Aligned_cols=71  Identities=23%  Similarity=0.281  Sum_probs=58.0

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+...++|.+.+..   .+++..+..++.|++.|+.|+|+++++|+|++++||++    ..+..++|+|||+++....
T Consensus       109 ~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~----~~~~~~kl~Dfg~a~~~~~  179 (371)
T 2xrw_A          109 MELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTAGT  179 (371)
T ss_dssp             EECCSEEHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTSCEEECCCCC------
T ss_pred             EEcCCCCHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE----cCCCCEEEEEeeccccccc
Confidence            34556788888864   38999999999999999999999999999999999999    7778899999999987654

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.61  E-value=1.9e-15  Score=90.39  Aligned_cols=70  Identities=24%  Similarity=0.371  Sum_probs=62.4

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++... ..+++..+..++.|++.++.++|+++++|+|++++||++    ..+..++++|||.+.....
T Consensus        88 ~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~kl~dfg~~~~~~~  157 (276)
T 2yex_A           88 SGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL----DERDNLKISDFGLATVFRY  157 (276)
T ss_dssp             TTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCCTTCEECEE
T ss_pred             CCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEE----ccCCCEEEeeCCCccccCC
Confidence            467899988765 459999999999999999999999999999999999999    6778899999999987654

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.61  E-value=3.9e-15  Score=89.23  Aligned_cols=76  Identities=24%  Similarity=0.259  Sum_probs=62.0

Q ss_pred             CCCCHHHHHhhcc---cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCC---------------CCCceE
Q 038072            4 SGVNFYNHSKKSA---KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGK---------------DAGFMA   65 (97)
Q Consensus         4 ~g~~l~~~l~~~~---~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~---------------~~~~~~   65 (97)
                      .|++|.+++....   ..+++..+..++.|++.|+.|+|+++++|+|++++||++....               .....+
T Consensus        94 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (289)
T 1x8b_A           94 NGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMF  173 (289)
T ss_dssp             TTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------CCCE
T ss_pred             CCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEE
Confidence            4789999997642   4489999999999999999999999999999999999994321               144578


Q ss_pred             EEeecCceeeeccC
Q 038072           66 KIVARGDKCLHERH   79 (97)
Q Consensus        66 ~i~dfg~a~~~~~~   79 (97)
                      +++|||.+......
T Consensus       174 kl~Dfg~~~~~~~~  187 (289)
T 1x8b_A          174 KIGDLGHVTRISSP  187 (289)
T ss_dssp             EECCCTTCEETTCS
T ss_pred             EEcccccccccCCc
Confidence            99999999876543

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.61  E-value=5.9e-16  Score=96.62  Aligned_cols=71  Identities=27%  Similarity=0.302  Sum_probs=52.3

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +..|++|.+++..  +.+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||+++....
T Consensus       114 e~~~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll----~~~~~~kL~DFG~a~~~~~  184 (367)
T 2fst_X          114 HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV----NEDCELKILDFGLARHTAD  184 (367)
T ss_dssp             ECCCEECC-------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTCCEEECC---------
T ss_pred             cccCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEE----CCCCCEEEeeccccccccc
Confidence            4557888888876  459999999999999999999999999999999999999    7778999999999986543

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.61  E-value=6.5e-16  Score=102.16  Aligned_cols=71  Identities=13%  Similarity=0.140  Sum_probs=63.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++... ..+++..+..++.|++.|+.|+|+++++|+|+|++||++    +.+..+||+|||+++....
T Consensus       451 ~~~g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl----~~~~~~kL~DFGla~~~~~  521 (635)
T 4fl3_A          451 AELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL----VTQHYAKISDFGLSKALRA  521 (635)
T ss_dssp             CTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----EETTEEEECCTTHHHHTTC
T ss_pred             cCCCCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEE----eCCCCEEEEEcCCcccccc
Confidence            3578999999876 459999999999999999999999999999999999999    5577899999999976543

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.61  E-value=3.4e-15  Score=93.09  Aligned_cols=56  Identities=30%  Similarity=0.424  Sum_probs=49.1

Q ss_pred             CCCCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHc-CccccCCCCCcEEEe
Q 038072            1 MASSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSH-GVAHCGIKLDNILLV   56 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~-~~~~~~l~~~~i~~~   56 (97)
                      |+..++++.+.+.... +.+++..+..++.|++.|+.|+|++ +++|+|+|++||++.
T Consensus       124 ~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~  181 (397)
T 1wak_A          124 FEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLS  181 (397)
T ss_dssp             ECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEEC
T ss_pred             EeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEe
Confidence            4666888888876643 4599999999999999999999998 999999999999994

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.61  E-value=6.8e-15  Score=89.98  Aligned_cols=73  Identities=25%  Similarity=0.239  Sum_probs=64.0

Q ss_pred             CCCCCHHHHHhhcc---cccCHHHHHHHHHHHHHHHHHHHHc---CccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            3 SSGVNFYNHSKKSA---KILLEHEVRRYTRDILRGLDHIHSH---GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         3 ~~g~~l~~~l~~~~---~~l~~~~~~~~~~~i~~~l~~~h~~---~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      +.|++|.+++....   ..+++..+..++.|++.++.|+|++   +++|+|++++||++    ..+..++|+|||++...
T Consensus       109 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~----~~~~~~kl~Dfg~~~~~  184 (326)
T 3uim_A          109 MANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL----DEEFEAVVGDFGLAKLM  184 (326)
T ss_dssp             CTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEE----CTTCCEEECCCSSCEEC
T ss_pred             ccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEE----CCCCCEEeccCcccccc
Confidence            35789999998642   2389999999999999999999999   99999999999999    77789999999999876


Q ss_pred             ccC
Q 038072           77 ERH   79 (97)
Q Consensus        77 ~~~   79 (97)
                      ...
T Consensus       185 ~~~  187 (326)
T 3uim_A          185 DYK  187 (326)
T ss_dssp             CSS
T ss_pred             Ccc
Confidence            543

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.61  E-value=3e-15  Score=90.36  Aligned_cols=73  Identities=12%  Similarity=0.134  Sum_probs=64.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      +.|++|.+++... ..+++..+..++.|++.++.++|+++++|+|++++||++    ..+..++|+|||++.......
T Consensus        99 ~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~----~~~~~~kl~Dfg~~~~~~~~~  171 (291)
T 1xbb_A           99 AELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL----VTQHYAKISDFGLSKALRADE  171 (291)
T ss_dssp             CTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----EETTEEEECCCTTCEECCTTC
T ss_pred             CCCCCHHHHHHhC-cCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEE----eCCCcEEEccCCcceeeccCC
Confidence            3478999999876 449999999999999999999999999999999999999    556789999999998765443

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.61  E-value=2.8e-15  Score=91.82  Aligned_cols=69  Identities=23%  Similarity=0.353  Sum_probs=61.6

Q ss_pred             CCCCHHHHHhhcc---------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEe
Q 038072            4 SGVNFYNHSKKSA---------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV   68 (97)
Q Consensus         4 ~g~~l~~~l~~~~---------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~   68 (97)
                      .|++|.+++....               ..+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+
T Consensus       109 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~----~~~~~~kL~  184 (327)
T 1fvr_A          109 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV----GENYVAKIA  184 (327)
T ss_dssp             TTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CGGGCEEEC
T ss_pred             CCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEE----cCCCeEEEc
Confidence            4789999997643               358999999999999999999999999999999999999    677899999


Q ss_pred             ecCceeee
Q 038072           69 ARGDKCLH   76 (97)
Q Consensus        69 dfg~a~~~   76 (97)
                      |||+++..
T Consensus       185 Dfg~~~~~  192 (327)
T 1fvr_A          185 DFGLSRGQ  192 (327)
T ss_dssp             CTTCEESS
T ss_pred             ccCcCccc
Confidence            99999743

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.61  E-value=2.3e-15  Score=94.58  Aligned_cols=75  Identities=24%  Similarity=0.290  Sum_probs=60.9

Q ss_pred             CCCCCCHHHHHhh---cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKK---SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~---~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +...+++.+.+..   ....+++..++.++.|++.|+.|+|+++++|+|+|++||++.   ..+..+||+|||+++....
T Consensus       118 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~---~~~~~~kL~DFG~a~~~~~  194 (394)
T 4e7w_A          118 EYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLD---PPSGVLKLIDFGSAKILIA  194 (394)
T ss_dssp             ECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---TTTTEEEECCCTTCEECCT
T ss_pred             eccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEc---CCCCcEEEeeCCCcccccC
Confidence            4445566655442   235599999999999999999999999999999999999993   2577899999999987654


Q ss_pred             C
Q 038072           79 H   79 (97)
Q Consensus        79 ~   79 (97)
                      .
T Consensus       195 ~  195 (394)
T 4e7w_A          195 G  195 (394)
T ss_dssp             T
T ss_pred             C
Confidence            3

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.61  E-value=3.7e-15  Score=91.12  Aligned_cols=78  Identities=21%  Similarity=0.341  Sum_probs=63.9

Q ss_pred             CCCCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCC---------------CCce
Q 038072            1 MASSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKD---------------AGFM   64 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~---------------~~~~   64 (97)
                      |+..+++|.+++.... ..+++..+..++.|++.|+.|+|+++++|+|++++||++.....               ....
T Consensus        96 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~  175 (339)
T 1z57_A           96 FELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPD  175 (339)
T ss_dssp             EECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCC
T ss_pred             EcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCC
Confidence            4566899999998763 34899999999999999999999999999999999999943100               0456


Q ss_pred             EEEeecCceeeecc
Q 038072           65 AKIVARGDKCLHER   78 (97)
Q Consensus        65 ~~i~dfg~a~~~~~   78 (97)
                      ++|+|||++.....
T Consensus       176 ~kl~Dfg~~~~~~~  189 (339)
T 1z57_A          176 IKVVDFGSATYDDE  189 (339)
T ss_dssp             EEECCCSSCEETTS
T ss_pred             ceEeeCcccccCcc
Confidence            99999999986443

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.61  E-value=4.2e-15  Score=90.41  Aligned_cols=72  Identities=25%  Similarity=0.242  Sum_probs=64.2

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .|++|.+++......+++..+..++.+++.++.++|+.+++|+|++++||++    +.+..++|+|||++......
T Consensus       107 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~kl~dfg~~~~~~~~  178 (314)
T 3com_A          107 GAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL----NTEGHAKLADFGVAGQLTDT  178 (314)
T ss_dssp             TTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTCCEEECCCTTCEECBTT
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEE----CCCCCEEEeecccchhhhhh
Confidence            4679999998655669999999999999999999999999999999999999    66788999999999876543

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.61  E-value=6.9e-16  Score=92.88  Aligned_cols=73  Identities=14%  Similarity=0.087  Sum_probs=61.1

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCC----CCceEEEeecCceeee
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKD----AGFMAKIVARGDKCLH   76 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~----~~~~~~i~dfg~a~~~   76 (97)
                      .|++|.+++......+++..+..++.|++.++.|+|+++++|+|++++||++.....    ....++++|||++...
T Consensus        95 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~  171 (289)
T 4fvq_A           95 KFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV  171 (289)
T ss_dssp             TTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTT
T ss_pred             CCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccc
Confidence            478999999887556999999999999999999999999999999999999954211    1112999999998654

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.61  E-value=1.3e-15  Score=91.68  Aligned_cols=74  Identities=22%  Similarity=0.277  Sum_probs=56.9

Q ss_pred             CCCCCCCHHHHHhh---cccccCHHHHHHHHHHHHHHHHHHHHc-CccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            1 MASSGVNFYNHSKK---SAKILLEHEVRRYTRDILRGLDHIHSH-GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         1 m~~~g~~l~~~l~~---~~~~l~~~~~~~~~~~i~~~l~~~h~~-~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      |+..+++|.+++..   ....+++..+..++.|++.++.|+|++ +++|+|++++||++    +....++|+|||++...
T Consensus        85 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~~~  160 (290)
T 3fme_A           85 MELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLI----NALGQVKMCDFGISGYL  160 (290)
T ss_dssp             EECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEE----CTTCCEEBCCC------
T ss_pred             EehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE----CCCCCEEEeecCCcccc
Confidence            34556788777654   335599999999999999999999998 99999999999999    67789999999999765


Q ss_pred             cc
Q 038072           77 ER   78 (97)
Q Consensus        77 ~~   78 (97)
                      ..
T Consensus       161 ~~  162 (290)
T 3fme_A          161 VD  162 (290)
T ss_dssp             --
T ss_pred             cc
Confidence            54

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.61  E-value=9.1e-16  Score=97.59  Aligned_cols=78  Identities=19%  Similarity=0.147  Sum_probs=62.6

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCC-CCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGK-DAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~-~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+..+++|.+++......+.+..+..++.|++.|+.|+|+++++|+|+|++||++.... .....++|+|||+++....
T Consensus        97 ~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~  175 (432)
T 3p23_A           97 IELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV  175 (432)
T ss_dssp             EECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred             EECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence            45667899999987655566667789999999999999999999999999999995321 2345688999999987653

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.61  E-value=4.4e-15  Score=90.41  Aligned_cols=73  Identities=25%  Similarity=0.259  Sum_probs=59.8

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++... ..+++..+..++.|++.|+.|+|+++++|+|++++||++... .....++|+|||++....
T Consensus        93 ~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~-~~~~~~kl~Dfg~~~~~~  165 (316)
T 2ac3_A           93 MRGGSILSHIHKR-RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHP-NQVSPVKICDFDLGSGIK  165 (316)
T ss_dssp             CTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCS-SSSCSEEECCTTCCC---
T ss_pred             CCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccC-CCcCceEEEEccCccccc
Confidence            3478999999876 459999999999999999999999999999999999999431 112349999999987654

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.60  E-value=8e-15  Score=89.64  Aligned_cols=71  Identities=15%  Similarity=0.138  Sum_probs=63.8

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      .+++|.+++...  .+++..+..++.|++.++.++|+++++|+|++++||++    +.+..++|+|||++.......
T Consensus       118 ~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~----~~~~~~kl~Dfg~a~~~~~~~  188 (318)
T 3lxp_A          118 PLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLL----DNDRLVKIGDFGLAKAVPEGH  188 (318)
T ss_dssp             TTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCGGGCEECCTTC
T ss_pred             cCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE----cCCCCEEECCccccccccccc
Confidence            478999999874  49999999999999999999999999999999999999    777889999999998776543

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.60  E-value=6.2e-15  Score=89.30  Aligned_cols=73  Identities=25%  Similarity=0.275  Sum_probs=62.1

Q ss_pred             CCCCCCHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKKS-AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~~-~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +...+.|.+++... ...+++..+..++.|++.|+.|+|+++++|+|++++||++    ..+..++++|||++.....
T Consensus        88 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~----~~~~~~kl~dfg~~~~~~~  161 (305)
T 2wtk_C           88 EYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLL----TTGGTLKISALGVAEALHP  161 (305)
T ss_dssp             ECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCCTTCEECCT
T ss_pred             hhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE----cCCCcEEeeccccccccCc
Confidence            34445577777653 3459999999999999999999999999999999999999    7778899999999987654

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.60  E-value=9.3e-15  Score=88.27  Aligned_cols=71  Identities=24%  Similarity=0.360  Sum_probs=63.9

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .|++|.+++... ..+++..+..++.|++.++.++|+++++|+|++++||++    +.+..++|+|||++......
T Consensus       107 ~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~kl~dfg~~~~~~~~  177 (298)
T 1phk_A          107 KKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL----DDDMNIKLTDFGFSCQLDPG  177 (298)
T ss_dssp             TTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCCTTCEECCTT
T ss_pred             CCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE----cCCCcEEEecccchhhcCCC
Confidence            478999999875 459999999999999999999999999999999999999    67788999999999876543

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.60  E-value=5.3e-15  Score=89.20  Aligned_cols=75  Identities=24%  Similarity=0.272  Sum_probs=61.0

Q ss_pred             CCCCCHHHHHhhc---ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKS---AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~---~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++...   ...+++..+..++.|++.++.|+|+++++|+|++++||++... .....++|+|||++.....
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~-~~~~~~kl~Dfg~a~~~~~  179 (285)
T 3is5_A          102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDT-SPHSPIKIIDFGLAELFKS  179 (285)
T ss_dssp             CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSS-STTCCEEECCCCCCCC---
T ss_pred             CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecC-CCCCCEEEEeeecceecCC
Confidence            3478999988643   2459999999999999999999999999999999999999532 3356799999999976554

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.60  E-value=4.9e-15  Score=89.36  Aligned_cols=70  Identities=27%  Similarity=0.259  Sum_probs=63.2

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++......+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++++|||++....
T Consensus        98 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~----~~~~~~kl~dfg~~~~~~  167 (303)
T 1zy4_A           98 ENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI----DESRNVKIGDFGLAKNVH  167 (303)
T ss_dssp             CSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTSCEEECCCCCCSCTT
T ss_pred             CCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEE----cCCCCEEEeeCcchhhcc
Confidence            4789999998765568999999999999999999999999999999999999    677889999999997654

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.60  E-value=1.6e-15  Score=96.82  Aligned_cols=71  Identities=18%  Similarity=0.242  Sum_probs=62.8

Q ss_pred             CCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.+|+|.+++.... ..+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..+||+|||+++...
T Consensus       264 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill----~~~~~~kl~DFG~a~~~~  335 (454)
T 1qcf_A          264 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV----SASLVCKIADFGLARVIE  335 (454)
T ss_dssp             CTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE----CTTCCEEECSTTGGGGBC
T ss_pred             cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEE----CCCCcEEEeeCCCceEcC
Confidence            35789999998642 348999999999999999999999999999999999999    778899999999997654

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.60  E-value=3.6e-15  Score=90.60  Aligned_cols=72  Identities=21%  Similarity=0.243  Sum_probs=60.7

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      .+++|.+++... ..+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||++.......
T Consensus        85 ~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~  156 (311)
T 4agu_A           85 DHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILI----TKHSVIKLCDFGFARLLTGPS  156 (311)
T ss_dssp             SEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECC---
T ss_pred             CCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEE----cCCCCEEEeeCCCchhccCcc
Confidence            456677776655 559999999999999999999999999999999999999    777899999999998766433

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.60  E-value=1.8e-15  Score=92.57  Aligned_cols=74  Identities=20%  Similarity=0.213  Sum_probs=64.1

Q ss_pred             CCCCCCCHHHHHhh--cccccCHHHHHHHHHHHHHHHHHHHHcC--ccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            1 MASSGVNFYNHSKK--SAKILLEHEVRRYTRDILRGLDHIHSHG--VAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         1 m~~~g~~l~~~l~~--~~~~l~~~~~~~~~~~i~~~l~~~h~~~--~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      |+..+|+|.+++..  ..+.+++..+..++.|++.++.|+|+++  ++|+|++++||++    ..+..++|+|||++...
T Consensus       113 ~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~----~~~~~~kl~Dfg~~~~~  188 (337)
T 3ll6_A          113 TELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL----SNQGTIKLCDFGSATTI  188 (337)
T ss_dssp             EECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEE----CTTSCEEBCCCTTCBCC
T ss_pred             EEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEE----CCCCCEEEecCccceec
Confidence            34567899998875  2345999999999999999999999999  9999999999999    67788999999999876


Q ss_pred             cc
Q 038072           77 ER   78 (97)
Q Consensus        77 ~~   78 (97)
                      ..
T Consensus       189 ~~  190 (337)
T 3ll6_A          189 SH  190 (337)
T ss_dssp             SS
T ss_pred             cc
Confidence            54

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.60  E-value=5.2e-15  Score=94.41  Aligned_cols=71  Identities=11%  Similarity=0.167  Sum_probs=63.0

Q ss_pred             CCCCCHHHHHhhcccc-cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKKSAKI-LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~-l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.|++|.+++...... +++..+..++.|++.|+.|+|+++++|+|++++||++    ..+..+||+|||+++...
T Consensus       269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill----~~~~~~kl~DfG~a~~~~  340 (450)
T 1k9a_A          269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV----SEDNVAKVSDFGLTKEAS  340 (450)
T ss_dssp             CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----CTTSCEEECCCTTCEECC
T ss_pred             cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEE----CCCCCEEEeeCCCccccc
Confidence            3578999999876333 7999999999999999999999999999999999999    777899999999998644

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.60  E-value=4.3e-15  Score=91.38  Aligned_cols=77  Identities=18%  Similarity=0.286  Sum_probs=63.8

Q ss_pred             CCCCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCC---------------CCCce
Q 038072            1 MASSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGK---------------DAGFM   64 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~---------------~~~~~   64 (97)
                      |+..++++.+.+.... ..+++..+..++.|++.|+.|+|+++++|+|++++||++....               .....
T Consensus       101 ~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  180 (355)
T 2eu9_A          101 FELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS  180 (355)
T ss_dssp             EECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCC
T ss_pred             EeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCc
Confidence            4566888888887653 4599999999999999999999999999999999999994321               23567


Q ss_pred             EEEeecCceeeec
Q 038072           65 AKIVARGDKCLHE   77 (97)
Q Consensus        65 ~~i~dfg~a~~~~   77 (97)
                      ++|+|||+++...
T Consensus       181 ~kl~Dfg~~~~~~  193 (355)
T 2eu9_A          181 IRVADFGSATFDH  193 (355)
T ss_dssp             EEECCCTTCEETT
T ss_pred             EEEeecCcccccc
Confidence            9999999998644

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.59  E-value=3.4e-15  Score=88.93  Aligned_cols=70  Identities=11%  Similarity=0.106  Sum_probs=63.4

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++......+++..+..++.|++.++.++|+++++|+|++++||++    +.+..++|+|||++....
T Consensus        86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili----~~~~~~kl~dfg~~~~~~  155 (267)
T 3t9t_A           86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV----GENQVIKVSDFGMTRFVL  155 (267)
T ss_dssp             TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE----CGGGCEEECCTTGGGGBC
T ss_pred             CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEE----CCCCCEEEcccccccccc
Confidence            4789999998765669999999999999999999999999999999999999    677889999999987653

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.59  E-value=7.8e-15  Score=90.06  Aligned_cols=71  Identities=18%  Similarity=0.245  Sum_probs=63.5

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH--------HcCccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIH--------SHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h--------~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      .+++|.+++..  ..+++..+..++.|++.++.|+|        +.+++|+|++++||++    +.+..++|+|||++..
T Consensus       123 ~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll----~~~~~~kL~Dfg~~~~  196 (342)
T 1b6c_B          123 EHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV----KKNGTCCIADLGLAVR  196 (342)
T ss_dssp             TTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEE----CTTSCEEECCCTTCEE
T ss_pred             CCCcHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEE----CCCCCEEEEECCCcee
Confidence            46799999976  45899999999999999999999        8999999999999999    6778899999999987


Q ss_pred             eccCC
Q 038072           76 HERHG   80 (97)
Q Consensus        76 ~~~~~   80 (97)
                      .....
T Consensus       197 ~~~~~  201 (342)
T 1b6c_B          197 HDSAT  201 (342)
T ss_dssp             EETTT
T ss_pred             ccccc
Confidence            76543

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.59  E-value=4.4e-15  Score=90.72  Aligned_cols=71  Identities=32%  Similarity=0.415  Sum_probs=60.7

Q ss_pred             CCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++.... ..+++..+..++.|++.++.|+|+++++|+|++++||++    ..+..++|+|||++.....
T Consensus       110 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~----~~~~~~kl~Dfg~~~~~~~  181 (326)
T 2x7f_A          110 GAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL----TENAEVKLVDFGVSAQLDR  181 (326)
T ss_dssp             TTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE----CTTCCEEECCCTTTC----
T ss_pred             CCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEE----cCCCCEEEeeCcCceecCc
Confidence            4679999998753 448999999999999999999999999999999999999    6778899999999876554

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.59  E-value=1.1e-14  Score=87.44  Aligned_cols=74  Identities=20%  Similarity=0.324  Sum_probs=62.4

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .|++|.+.+... ..+++..+..++.|++.++.|+|+++++|+|++++||++... .....++|+|||++......
T Consensus        88 ~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~-~~~~~~kl~Dfg~~~~~~~~  161 (284)
T 3kk8_A           88 TGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASK-AKGAAVKLADFGLAIEVNDS  161 (284)
T ss_dssp             CSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSS-STTCCEEECCCTTCEECCSS
T ss_pred             CCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecC-CCCCcEEEeeceeeEEcccC
Confidence            478999988776 459999999999999999999999999999999999999432 22345999999999876543

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.59  E-value=2.8e-15  Score=95.66  Aligned_cols=71  Identities=20%  Similarity=0.241  Sum_probs=60.9

Q ss_pred             CCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++.... ..+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..+||+|||+++....
T Consensus       261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill----~~~~~~kl~DfG~a~~~~~  332 (452)
T 1fmk_A          261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV----GENLVCKVADFGLARLIED  332 (452)
T ss_dssp             TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGCEEECCCCTTC----
T ss_pred             cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEE----CCCCCEEECCCccceecCC
Confidence            4789999997542 348999999999999999999999999999999999999    6778999999999986543

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.59  E-value=1.9e-15  Score=92.61  Aligned_cols=74  Identities=23%  Similarity=0.195  Sum_probs=62.0

Q ss_pred             CCCCHHHHHhhcc------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSA------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++....      ..+++..+..++.|++.|+.|+|+++++|+|++++||++... .....++|+|||++....
T Consensus       116 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~-~~~~~~kl~Dfg~~~~~~  194 (327)
T 2yfx_A          116 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIY  194 (327)
T ss_dssp             TTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCS-STTCCEEECCCHHHHHHH
T ss_pred             CCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecC-CCcceEEECccccccccc
Confidence            4889999998753      338899999999999999999999999999999999999422 245579999999987554


Q ss_pred             c
Q 038072           78 R   78 (97)
Q Consensus        78 ~   78 (97)
                      .
T Consensus       195 ~  195 (327)
T 2yfx_A          195 R  195 (327)
T ss_dssp             C
T ss_pred             c
Confidence            3

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.59  E-value=6.2e-15  Score=88.39  Aligned_cols=72  Identities=19%  Similarity=0.220  Sum_probs=63.7

Q ss_pred             CCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++.... ..+++..+..++.|++.++.++|+++++|+|++++||++    +.+..++|+|||++.....
T Consensus        89 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~----~~~~~~kl~Dfg~~~~~~~  161 (279)
T 1qpc_A           89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV----SDTLSCKIADFGLARLIED  161 (279)
T ss_dssp             CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTSCEEECCCTTCEECSS
T ss_pred             CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEE----cCCCCEEECCCcccccccC
Confidence            34789999997642 248999999999999999999999999999999999999    7778899999999987654

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.59  E-value=5.8e-15  Score=89.71  Aligned_cols=71  Identities=27%  Similarity=0.345  Sum_probs=61.1

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +..+++|.+++..  +.+++..+..++.|++.|+.|+|+++++|+|++++||++.   ..+..++|+|||+++...
T Consensus       102 e~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~~kl~Dfg~~~~~~  172 (320)
T 2i6l_A          102 EYMETDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFIN---TEDLVLKIGDFGLARIMD  172 (320)
T ss_dssp             ECCSEEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE---TTTTEEEECCCTTCBCC-
T ss_pred             eccCCCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCeEEEccCccccccC
Confidence            4456789998875  4589999999999999999999999999999999999994   245689999999998654

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.59  E-value=9.7e-15  Score=89.34  Aligned_cols=71  Identities=21%  Similarity=0.334  Sum_probs=60.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      +.+++|.+++..    +++..+..++.|++.|+.|+|+++++|+|++++||++.   .....++|+|||+++......
T Consensus       115 ~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~---~~~~~~kl~Dfg~a~~~~~~~  185 (330)
T 3nsz_A          115 VNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID---HEHRKLRLIDWGLAEFYHPGQ  185 (330)
T ss_dssp             CCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---TTTTEEEECCCTTCEECCTTC
T ss_pred             cCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEc---CCCCEEEEEeCCCceEcCCCC
Confidence            346888888754    89999999999999999999999999999999999993   234489999999998765433

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.59  E-value=4.9e-15  Score=90.94  Aligned_cols=71  Identities=24%  Similarity=0.253  Sum_probs=55.9

Q ss_pred             CCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            5 GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         5 g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      |++|.+++... ..+++..+..++.|++.++.++|+++++|+|++++||++    +.+..++|+|||++.......
T Consensus       108 ~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~  178 (331)
T 4aaa_A          108 HTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILV----SQSGVVKLCDFGFARTLAAPG  178 (331)
T ss_dssp             EEHHHHHHHST-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEECCCTTC-------
T ss_pred             cchHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEE----cCCCcEEEEeCCCceeecCCc
Confidence            44555554443 559999999999999999999999999999999999999    777899999999998755433

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.59  E-value=8.8e-15  Score=88.69  Aligned_cols=71  Identities=27%  Similarity=0.269  Sum_probs=63.3

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      .|++|.+++..  +.+++..+..++.|++.++.++|+++++|+|++++||++    ..+..++|+|||++.......
T Consensus       103 ~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~kl~Dfg~~~~~~~~~  173 (303)
T 3a7i_A          103 GGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL----SEHGEVKLADFGVAGQLTDTQ  173 (303)
T ss_dssp             TTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECBTTB
T ss_pred             CCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEE----CCCCCEEEeecccceecCccc
Confidence            46799999875  459999999999999999999999999999999999999    677889999999998766543

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.59  E-value=5.6e-15  Score=91.63  Aligned_cols=78  Identities=26%  Similarity=0.385  Sum_probs=64.9

Q ss_pred             CCCCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHc-CccccCCCCCcEEEeeCC--CCCceEEEeecCceeee
Q 038072            1 MASSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSH-GVAHCGIKLDNILLVPGK--DAGFMAKIVARGDKCLH   76 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~-~~~~~~l~~~~i~~~~~~--~~~~~~~i~dfg~a~~~   76 (97)
                      |+..|++|.+++.... ..+++..+..++.|++.|+.|+|++ +++|+|++++||++....  .....++|+|||++...
T Consensus       109 ~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~  188 (373)
T 1q8y_A          109 FEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY  188 (373)
T ss_dssp             ECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEET
T ss_pred             EecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEccccccccc
Confidence            4566899999998742 4499999999999999999999998 999999999999995321  23457999999999876


Q ss_pred             cc
Q 038072           77 ER   78 (97)
Q Consensus        77 ~~   78 (97)
                      ..
T Consensus       189 ~~  190 (373)
T 1q8y_A          189 DE  190 (373)
T ss_dssp             TB
T ss_pred             CC
Confidence            54

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.59  E-value=5.5e-15  Score=91.11  Aligned_cols=74  Identities=22%  Similarity=0.355  Sum_probs=61.6

Q ss_pred             CCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++.... ..+++..+..++.|++.++.|+|+++++|+|++++||++... .....++|+|||++.....
T Consensus       109 ~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~-~~~~~~kl~Dfg~~~~~~~  183 (336)
T 3fhr_A          109 EGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSK-EKDAVLKLTDFGFAKETTQ  183 (336)
T ss_dssp             TTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCS-STTCCEEECCCTTCEEC--
T ss_pred             CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEec-CCCceEEEeccccceeccc
Confidence            4789999998753 359999999999999999999999999999999999999432 2245699999999986553

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.58  E-value=5.7e-15  Score=88.83  Aligned_cols=72  Identities=11%  Similarity=0.115  Sum_probs=63.5

Q ss_pred             CCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++.... ..+++..+..++.|++.++.++|+++++|+|++++||++    +.+..++|+|||++.....
T Consensus        91 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~----~~~~~~~l~Dfg~~~~~~~  163 (288)
T 3kfa_A           91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV----GENHLVKVADFGLSRLMTG  163 (288)
T ss_dssp             CTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEE----CGGGCEEECCCCGGGTSCS
T ss_pred             CCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEE----cCCCCEEEccCccceeccC
Confidence            35789999998742 448999999999999999999999999999999999999    6778899999999976554

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.58  E-value=1.4e-14  Score=86.91  Aligned_cols=74  Identities=26%  Similarity=0.394  Sum_probs=62.4

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++... ..+++..+..++.|++.++.++|+++++|+|++++||++.........++|+|||++.....
T Consensus        91 ~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~  164 (283)
T 3bhy_A           91 SGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA  164 (283)
T ss_dssp             CSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-
T ss_pred             CCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccC
Confidence            479999999875 45999999999999999999999999999999999999943222234799999999987654

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.58  E-value=4.5e-15  Score=91.08  Aligned_cols=76  Identities=25%  Similarity=0.282  Sum_probs=61.4

Q ss_pred             CCCCCHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKS-AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~-~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.|++|.+++... ...+++..+..++.|++.++.|+|+++++|+|++++||++... .....++|+|||+++.....
T Consensus       111 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~-~~~~~~kL~Dfg~a~~~~~~  187 (327)
T 3lm5_A          111 AAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSI-YPLGDIKIVDFGMSRKIGHA  187 (327)
T ss_dssp             CTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCB-TTBCCEEECCGGGCEEC---
T ss_pred             cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecC-CCCCcEEEeeCccccccCCc
Confidence            4578999988653 3459999999999999999999999999999999999999421 12678999999999876543

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.58  E-value=1e-14  Score=87.80  Aligned_cols=74  Identities=19%  Similarity=0.192  Sum_probs=61.4

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC--ccccCCCCCcEEEeeCC-CCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHG--VAHCGIKLDNILLVPGK-DAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~--~~~~~l~~~~i~~~~~~-~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+.+......+++..+..++.|++.++.|+|+++  ++|+|++++||++.... .....++|+|||+++...
T Consensus       104 ~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~  180 (287)
T 4f0f_A          104 PCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV  180 (287)
T ss_dssp             TTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCS
T ss_pred             CCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcccccc
Confidence            468999988776566999999999999999999999999  99999999999994321 112248999999997543

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.58  E-value=1.3e-14  Score=87.20  Aligned_cols=70  Identities=20%  Similarity=0.203  Sum_probs=62.7

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.+++... +.+++..+..++.|++.++.++|+++++|+|++++||++    +.+..++|+|||++.....
T Consensus        97 ~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~kl~Dfg~~~~~~~  166 (284)
T 2vgo_A           97 PRGELYKELQKH-GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLM----GYKGELKIADFGWSVHAPS  166 (284)
T ss_dssp             TTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE----CTTCCEEECCCTTCEECSS
T ss_pred             CCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE----cCCCCEEEecccccccCcc
Confidence            467999999876 459999999999999999999999999999999999999    6778899999999876543

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.57  E-value=8.8e-15  Score=87.55  Aligned_cols=70  Identities=34%  Similarity=0.406  Sum_probs=63.1

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++... +.+++..+..++.|++.++.++|+++++|+|++++||++    +.+..++++|||++.....
T Consensus        94 ~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~~l~dfg~~~~~~~  163 (276)
T 2h6d_A           94 SGGELFDYICKH-GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL----DAHMNAKIADFGLSNMMSD  163 (276)
T ss_dssp             CSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEE----CTTSCEEECCCCGGGCCCC
T ss_pred             CCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEE----CCCCCEEEeecccccccCC
Confidence            478999999876 459999999999999999999999999999999999999    6778899999999876544

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.57  E-value=1.1e-14  Score=88.63  Aligned_cols=72  Identities=25%  Similarity=0.311  Sum_probs=64.0

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ..|++|.+++... +.+++..+..++.|++.++.|+|+++++|+|++++||++.   ..+..++|+|||++.....
T Consensus       121 ~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~~kl~dfg~~~~~~~  192 (312)
T 2iwi_A          121 LPAQDLFDYITEK-GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILID---LRRGCAKLIDFGSGALLHD  192 (312)
T ss_dssp             SSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEE---TTTTEEEECCCSSCEECCS
T ss_pred             CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEe---CCCCeEEEEEcchhhhccc
Confidence            4689999999875 4599999999999999999999999999999999999993   1577899999999987654

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.57  E-value=4.8e-15  Score=90.63  Aligned_cols=73  Identities=22%  Similarity=0.378  Sum_probs=61.8

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++... ..+++..+..++.|++.|+.|+|+++++|+|++++||++... .....++|+|||++.....
T Consensus        97 ~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~-~~~~~~kl~Dfg~~~~~~~  169 (322)
T 2ycf_A           97 EGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ-EEDCLIKITDFGHSKILGE  169 (322)
T ss_dssp             TTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSS-SSSCCEEECCCTTCEECCC
T ss_pred             CCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecC-CCCCeEEEccCccceeccc
Confidence            478999988765 459999999999999999999999999999999999999432 2234599999999987654

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.57  E-value=1.1e-14  Score=89.14  Aligned_cols=70  Identities=24%  Similarity=0.316  Sum_probs=62.0

Q ss_pred             CCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            5 GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         5 g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +++|.+++... +.+++..+..++.|++.++.|+|+++++|+|++++||++.   .....++|+|||+++....
T Consensus       133 ~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~~kL~Dfg~~~~~~~  202 (320)
T 3a99_A          133 VQDLFDFITER-GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID---LNRGELKLIDFGSGALLKD  202 (320)
T ss_dssp             EEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---TTTTEEEECCCTTCEECCS
T ss_pred             CccHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEe---CCCCCEEEeeCcccccccc
Confidence            38999999875 4599999999999999999999999999999999999993   2567899999999987654

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.57  E-value=1.2e-14  Score=88.57  Aligned_cols=70  Identities=26%  Similarity=0.304  Sum_probs=59.2

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++... +.+++..+..++.|++.++.|+|+++++|+|++++||++    ..+..++|+|||++.....
T Consensus       117 ~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~----~~~~~~kl~Dfg~~~~~~~  186 (309)
T 2h34_A          117 NGVDLAAMLRRQ-GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILV----SADDFAYLVDFGIASATTD  186 (309)
T ss_dssp             CCEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTSCEEECSCCC------
T ss_pred             CCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEE----cCCCCEEEecCccCccccc
Confidence            468999999876 459999999999999999999999999999999999999    6678899999999876554

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.57  E-value=4.9e-15  Score=89.55  Aligned_cols=73  Identities=22%  Similarity=0.228  Sum_probs=63.3

Q ss_pred             CCCCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            1 MASSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      |+...++|.+++.... ..+++..+..++.|++.|+.++|+++++|+|++++||++    +.+..++|+|||++....
T Consensus        81 ~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili----~~~~~~kl~dfg~~~~~~  154 (299)
T 2r3i_A           81 FEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAIKLADFGLARAFG  154 (299)
T ss_dssp             EECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEECSTTHHHHHC
T ss_pred             EEcccCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEE----cCCCCEEECcchhhhhcc
Confidence            3455678999887653 348999999999999999999999999999999999999    777889999999987654

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.57  E-value=8.3e-15  Score=87.92  Aligned_cols=69  Identities=25%  Similarity=0.233  Sum_probs=61.4

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+++|.+++... ..+++..+..++.|++.++.|+|+++++|+|++++||++    +.+..++|+|||++....
T Consensus        92 ~~~~l~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili----~~~~~~~l~Dfg~~~~~~  160 (279)
T 3fdn_A           92 PLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL----GSAGELKIADFGWSVHAP  160 (279)
T ss_dssp             TTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEE----CTTSCEEECSCCEESCC-
T ss_pred             CCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEE----cCCCCEEEEeccccccCC
Confidence            468999998876 449999999999999999999999999999999999999    778889999999886543

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.57  E-value=1.5e-14  Score=87.65  Aligned_cols=75  Identities=17%  Similarity=0.255  Sum_probs=63.8

Q ss_pred             CCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++.... ..+++..+..++.|++.|+.|+|+++++|+|++++||++... .....++|+|||++.....
T Consensus        97 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~-~~~~~~kl~Dfg~a~~~~~  172 (299)
T 3m2w_A           97 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTG  172 (299)
T ss_dssp             CCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSS-STTCCEEECCCTTCEECTT
T ss_pred             cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecC-CCCCcEEEecccccccccc
Confidence            34789999998753 359999999999999999999999999999999999999432 1267899999999987654

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.56  E-value=2.4e-15  Score=90.99  Aligned_cols=68  Identities=19%  Similarity=0.234  Sum_probs=61.4

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      .|++|.+++......+++..+..++.|++.++.|+|+++++|+|++++||++    ..+..++|+|||++..
T Consensus        99 ~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~~  166 (302)
T 2j7t_A           99 PGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLM----TLEGDIRLADFGVSAK  166 (302)
T ss_dssp             TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE----CTTSCEEECCCHHHHH
T ss_pred             CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE----CCCCCEEEEECCCCcc
Confidence            5788999887755669999999999999999999999999999999999999    6678899999998754

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.56  E-value=1.2e-14  Score=90.81  Aligned_cols=76  Identities=21%  Similarity=0.364  Sum_probs=63.4

Q ss_pred             CCCCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHH--HcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            1 MASSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIH--SHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h--~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      |+..+++|.+++.... ..+++..+..++.|++.|+.|+|  +.+++|+|+|++||++..  .....+||+|||+++...
T Consensus       135 ~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~--~~~~~~kL~DFG~a~~~~  212 (382)
T 2vx3_A          135 FEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN--PKRSAIKIVDFGSSCQLG  212 (382)
T ss_dssp             EECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESS--TTSCCEEECCCTTCEETT
T ss_pred             EecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEec--CCCCcEEEEeccCceecc
Confidence            4556789999998753 44899999999999999999999  468999999999999942  235679999999998764


Q ss_pred             c
Q 038072           78 R   78 (97)
Q Consensus        78 ~   78 (97)
                      .
T Consensus       213 ~  213 (382)
T 2vx3_A          213 Q  213 (382)
T ss_dssp             C
T ss_pred             c
Confidence            3

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.56  E-value=1.9e-14  Score=86.72  Aligned_cols=71  Identities=25%  Similarity=0.363  Sum_probs=61.9

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC--ccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHG--VAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~--~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++... ..+++..+..++.|++.++.|+|+++  ++|+|++++||++.   .....++|+|||++.....
T Consensus       112 ~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~---~~~~~~kl~Dfg~~~~~~~  184 (290)
T 1t4h_A          112 TSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT---GPTGSVKIGDLGLATLKRA  184 (290)
T ss_dssp             CSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES---STTSCEEECCTTGGGGCCT
T ss_pred             CCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEE---CCCCCEEEeeCCCcccccc
Confidence            478999999876 45999999999999999999999999  99999999999993   1567899999999965443

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.56  E-value=1.7e-14  Score=89.19  Aligned_cols=76  Identities=17%  Similarity=0.165  Sum_probs=61.2

Q ss_pred             CCCCCCCHHHHHhh---cccccCHHHHHHHHHHHHHHHHHHH--HcCccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            1 MASSGVNFYNHSKK---SAKILLEHEVRRYTRDILRGLDHIH--SHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         1 m~~~g~~l~~~l~~---~~~~l~~~~~~~~~~~i~~~l~~~h--~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      |+...++|.+.+..   ....+++..+..++.|++.++.|+|  +++++|+|+|++||++.   ..+..++|+|||+++.
T Consensus       105 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~---~~~~~~kl~Dfg~a~~  181 (360)
T 3e3p_A          105 MEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVN---EADGTLKLCDFGSAKK  181 (360)
T ss_dssp             EECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEE---TTTTEEEECCCTTCBC
T ss_pred             eecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEe---CCCCcEEEeeCCCcee
Confidence            34555676665543   2345899999999999999999999  99999999999999993   2367899999999987


Q ss_pred             eccC
Q 038072           76 HERH   79 (97)
Q Consensus        76 ~~~~   79 (97)
                      ....
T Consensus       182 ~~~~  185 (360)
T 3e3p_A          182 LSPS  185 (360)
T ss_dssp             CCTT
T ss_pred             cCCC
Confidence            6543

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.56  E-value=3.3e-15  Score=97.12  Aligned_cols=70  Identities=20%  Similarity=0.245  Sum_probs=62.2

Q ss_pred             CCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+++|.+++.... ..+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..+||+|||+++...
T Consensus       344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll----~~~~~~kl~DFG~a~~~~  414 (535)
T 2h8h_A          344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV----GENLVCKVADFGLARLIE  414 (535)
T ss_dssp             TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGCEEECCTTSTTTCC
T ss_pred             cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEE----cCCCcEEEcccccceecC
Confidence            4789999997542 348999999999999999999999999999999999999    677899999999997654

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.56  E-value=1e-14  Score=88.82  Aligned_cols=68  Identities=21%  Similarity=0.390  Sum_probs=59.0

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      .|++|.+++...+..+++..+..++.|++.|+.|+|+++++|+|++++||++    + +..++|+|||++...
T Consensus       112 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~----~-~~~~~l~Dfg~~~~~  179 (319)
T 2y4i_B          112 KGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY----D-NGKVVITDFGLFSIS  179 (319)
T ss_dssp             CSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEE----C---CCEECCCSCCC--
T ss_pred             cCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEE----e-CCCEEEeecCCcccc
Confidence            4789999998865569999999999999999999999999999999999999    4 458899999998754

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.55  E-value=2.7e-14  Score=86.82  Aligned_cols=72  Identities=22%  Similarity=0.313  Sum_probs=56.5

Q ss_pred             CCCCHHHHHhh---cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKK---SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~---~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .+++|.+++..   ....+++..+..++.|++.++.++|+.+++|+|++++||++    +.+..++|+|||++......
T Consensus       115 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~----~~~~~~kl~Dfg~~~~~~~~  189 (310)
T 2wqm_A          115 DAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI----TATGVVKLGDLGLGRFFSSK  189 (310)
T ss_dssp             CSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEECCC---------
T ss_pred             CCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEE----cCCCCEEEEeccceeeecCC
Confidence            46799998875   23448999999999999999999999999999999999999    67788999999998765543

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.55  E-value=9.4e-15  Score=91.08  Aligned_cols=70  Identities=21%  Similarity=0.260  Sum_probs=58.1

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +..+++|.+++..   .+++..+..++.|++.|+.|+|+++++|+|++++||++    ..+..++|+|||+++....
T Consensus       127 e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll----~~~~~~kL~Dfg~a~~~~~  196 (371)
T 4exu_A          127 PFMQTDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV----NEDCELKILDFGLARHADA  196 (371)
T ss_dssp             ECCCEEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTCCEEECSTTCC-----
T ss_pred             ccccccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEE----CCCCCEEEEecCccccccc
Confidence            4456778777744   39999999999999999999999999999999999999    7778899999999986543

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.54  E-value=2.4e-14  Score=86.25  Aligned_cols=72  Identities=25%  Similarity=0.255  Sum_probs=61.3

Q ss_pred             CCCCHHHHHhhccc--ccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAK--ILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~--~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++....+  .+++..+..++.|++.|+.|+|+++++|+|++++||++.   ..+..++|+|||++.....
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~kl~Dfg~~~~~~~  175 (295)
T 2clq_A          102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLIN---TYSGVLKISDFGTSKRLAG  175 (295)
T ss_dssp             SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---TTTCCEEECCTTTCEESCC
T ss_pred             CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEE---CCCCCEEEeecccccccCC
Confidence            47899999987533  367889999999999999999999999999999999993   2267899999999987654

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.54  E-value=2.1e-14  Score=86.75  Aligned_cols=70  Identities=27%  Similarity=0.386  Sum_probs=61.6

Q ss_pred             CCCCHHHHHhh-------cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeee
Q 038072            4 SGVNFYNHSKK-------SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH   76 (97)
Q Consensus         4 ~g~~l~~~l~~-------~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~   76 (97)
                      .|++|.+++..       ....+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||++...
T Consensus        96 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~kl~dfg~~~~~  171 (303)
T 2vwi_A           96 SGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL----GEDGSVQIADFGVSAFL  171 (303)
T ss_dssp             TTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE----CTTCCEEECCCHHHHHC
T ss_pred             cCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEE----cCCCCEEEEeccchhee
Confidence            47899999874       22448999999999999999999999999999999999999    67788999999998654


Q ss_pred             c
Q 038072           77 E   77 (97)
Q Consensus        77 ~   77 (97)
                      .
T Consensus       172 ~  172 (303)
T 2vwi_A          172 A  172 (303)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.53  E-value=1.8e-14  Score=89.23  Aligned_cols=69  Identities=19%  Similarity=0.220  Sum_probs=61.6

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc-CccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSH-GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~-~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++... +.+++..+..++.+++.++.|+|+. +++|+|++++||++    +.+..++|+|||++....
T Consensus       114 ~~~~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~  183 (360)
T 3eqc_A          114 DGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV----NSRGEIKLCDFGVSGQLI  183 (360)
T ss_dssp             TTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEE----CTTCCEEECCCCCCHHHH
T ss_pred             CCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEE----CCCCCEEEEECCCCcccc
Confidence            478999999876 4599999999999999999999986 99999999999999    677889999999986543

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.53  E-value=2.8e-14  Score=86.79  Aligned_cols=74  Identities=24%  Similarity=0.205  Sum_probs=59.3

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc-CccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSH-GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~-~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+..++.+..+.......+++..+..++.|++.++.|+|+. +++|+|++++||++    +.+..++|+|||++.....
T Consensus       103 ~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~----~~~~~~kl~dfg~~~~~~~  177 (318)
T 2dyl_A          103 MELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL----DERGQIKLCDFGISGRLVD  177 (318)
T ss_dssp             ECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEE----CTTSCEEECCCTTC-----
T ss_pred             EeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEE----CCCCCEEEEECCCchhccC
Confidence            34556666666665446699999999999999999999995 99999999999999    6778899999999976544

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.53  E-value=3.9e-14  Score=84.55  Aligned_cols=73  Identities=21%  Similarity=0.239  Sum_probs=57.2

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCCCCcEEEeeCC----CCCceEEEeecCceeee
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHG---VAHCGIKLDNILLVPGK----DAGFMAKIVARGDKCLH   76 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~---~~~~~l~~~~i~~~~~~----~~~~~~~i~dfg~a~~~   76 (97)
                      .|++|.+++..  +.+++..+..++.|++.++.|+|+++   ++|+|++++||++....    .....++++|||++...
T Consensus        89 ~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~  166 (271)
T 3dtc_A           89 RGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW  166 (271)
T ss_dssp             TTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC----
T ss_pred             CCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccccc
Confidence            47899988864  45999999999999999999999998   88999999999994311    12667999999999865


Q ss_pred             cc
Q 038072           77 ER   78 (97)
Q Consensus        77 ~~   78 (97)
                      ..
T Consensus       167 ~~  168 (271)
T 3dtc_A          167 HR  168 (271)
T ss_dssp             --
T ss_pred             cc
Confidence            54

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.52  E-value=6.9e-14  Score=85.15  Aligned_cols=71  Identities=25%  Similarity=0.317  Sum_probs=62.4

Q ss_pred             CCCCCHHHHHhh---cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            3 SSGVNFYNHSKK---SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         3 ~~g~~l~~~l~~---~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +.+++|.+++..   ....+++..+..++.|++.++.|+|+++++|+|++++||++    ..+..++|+|||++....
T Consensus       112 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~----~~~~~~kl~dfg~~~~~~  185 (317)
T 2buj_A          112 FKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILL----GDEGQPVLMDLGSMNQAC  185 (317)
T ss_dssp             CTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTSCEEECCCSSCEESC
T ss_pred             CCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE----cCCCCEEEEecCcchhcc
Confidence            357899998876   23559999999999999999999999999999999999999    677889999999887643

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.52  E-value=3e-14  Score=85.46  Aligned_cols=71  Identities=11%  Similarity=0.195  Sum_probs=58.5

Q ss_pred             CCCCHHHHHhhccc-ccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAK-ILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~-~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+++..... .+++..+..++.|++.++.++|+++++|+|++++||++    ..+..++|+|||++.....
T Consensus        98 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~~l~Dfg~~~~~~~  169 (278)
T 1byg_A           98 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV----SEDNVAKVSDFGLTKEASS  169 (278)
T ss_dssp             TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CTTSCEEECCCCC------
T ss_pred             CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEE----eCCCcEEEeeccccccccc
Confidence            46799999986532 28999999999999999999999999999999999999    6778999999999876543

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.52  E-value=1.2e-14  Score=89.83  Aligned_cols=69  Identities=22%  Similarity=0.266  Sum_probs=58.5

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      +..+++|.+++..   .+++..+..++.|++.|+.|+|+++++|+|++++||++    +.+..++|+|||++....
T Consensus       109 e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~----~~~~~~kl~Dfg~~~~~~  177 (353)
T 3coi_A          109 PFMQTDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV----NEDCELKILDFGLARHAD  177 (353)
T ss_dssp             ECCSEEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE----CTTCCEEECSTTCTTC--
T ss_pred             ccccCCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeE----CCCCcEEEeecccccCCC
Confidence            3445677776643   38999999999999999999999999999999999999    777889999999997654

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.51  E-value=4.5e-14  Score=85.05  Aligned_cols=74  Identities=24%  Similarity=0.426  Sum_probs=62.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++... ..+++..+..++.|++.++.++|+++++|+|++++||++... .....++|+|||++.....
T Consensus       103 ~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~-~~~~~~kL~Dfg~~~~~~~  176 (287)
T 2wei_A          103 YTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESK-EKDCDIKIIDFGLSTCFQQ  176 (287)
T ss_dssp             CCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCS-STTCCEEECSTTGGGTBCC
T ss_pred             cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecC-CCcccEEEeccCcceeecC
Confidence            3578999988765 459999999999999999999999999999999999999432 2245799999999876544

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.51  E-value=2.4e-14  Score=95.21  Aligned_cols=68  Identities=24%  Similarity=0.297  Sum_probs=56.3

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .|++|.+++..   .+++..+..++.|++.++.|+|+++++|+|+|++||++    +.+ .+||+|||+++.....
T Consensus       167 ~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll----~~~-~~kl~DFG~a~~~~~~  234 (681)
T 2pzi_A          167 GGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIML----TEE-QLKLIDLGAVSRINSF  234 (681)
T ss_dssp             CCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CSS-CEEECCCTTCEETTCC
T ss_pred             CCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEE----eCC-cEEEEecccchhcccC
Confidence            46788777654   49999999999999999999999999999999999999    443 7899999999876543

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.51  E-value=1.2e-14  Score=87.14  Aligned_cols=71  Identities=23%  Similarity=0.220  Sum_probs=60.2

Q ss_pred             CCCCHHHHHhhcc---cccCHHHHHHHHHHHHHHHHHHHHcC-----ccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            4 SGVNFYNHSKKSA---KILLEHEVRRYTRDILRGLDHIHSHG-----VAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         4 ~g~~l~~~l~~~~---~~l~~~~~~~~~~~i~~~l~~~h~~~-----~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      .|++|.+++....   ..+++..+..++.|++.++.++|+.+     ++|+|++++||++    +.+..++|+|||++..
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~----~~~~~~kl~dfg~~~~  165 (279)
T 2w5a_A           90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL----DGKQNVKLGDFGLARI  165 (279)
T ss_dssp             TTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEE----CSSSCEEECCCCHHHH
T ss_pred             CCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEE----cCCCCEEEecCchhee
Confidence            4679999987642   33899999999999999999999999     9999999999999    7778899999999876


Q ss_pred             ecc
Q 038072           76 HER   78 (97)
Q Consensus        76 ~~~   78 (97)
                      ...
T Consensus       166 ~~~  168 (279)
T 2w5a_A          166 LNH  168 (279)
T ss_dssp             C--
T ss_pred             ecc
Confidence            544

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.51  E-value=4.6e-14  Score=85.64  Aligned_cols=72  Identities=17%  Similarity=0.326  Sum_probs=62.0

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++... +.+++..+..++.|++.++.|+|+++++|+|++++||++... +....++|+|||++....
T Consensus        89 ~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~-~~~~~~kl~Dfg~~~~~~  160 (304)
T 2jam_A           89 SGGELFDRILER-GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTP-EENSKIMITDFGLSKMEQ  160 (304)
T ss_dssp             CSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSS-STTCCEEBCSCSTTCCCC
T ss_pred             CCccHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecC-CCCCCEEEccCCcceecC
Confidence            478999998776 459999999999999999999999999999999999998432 346779999999987544

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.51  E-value=3.9e-14  Score=87.11  Aligned_cols=58  Identities=26%  Similarity=0.377  Sum_probs=49.5

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           19 LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        19 l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +++..+..++.|++.++.|+|+++++|+|++++||++..  .....++|+|||+++....
T Consensus       165 ~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~--~~~~~~kl~Dfg~a~~~~~  222 (345)
T 3hko_A          165 QREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFST--NKSFEIKLVDFGLSKEFYK  222 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESC--SSSCCEEECCCTTCEEGGG
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEec--CCCceEEEeeccccccccc
Confidence            467888899999999999999999999999999999932  1223799999999987644

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.51  E-value=1.8e-14  Score=91.59  Aligned_cols=79  Identities=19%  Similarity=0.180  Sum_probs=58.8

Q ss_pred             CCCCCCCHHHHHhhcccc------cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCC---------CCCceE
Q 038072            1 MASSGVNFYNHSKKSAKI------LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGK---------DAGFMA   65 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~------l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~---------~~~~~~   65 (97)
                      |+..+++|.+++......      .++..+..++.|++.|+.|+|+++++|+|+|++||++....         .....+
T Consensus        88 ~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~  167 (434)
T 2rio_A           88 LELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI  167 (434)
T ss_dssp             ECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred             EecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEE
Confidence            456678999999864221      12334567999999999999999999999999999995321         234589


Q ss_pred             EEeecCceeeeccC
Q 038072           66 KIVARGDKCLHERH   79 (97)
Q Consensus        66 ~i~dfg~a~~~~~~   79 (97)
                      +|+|||+++.....
T Consensus       168 kL~DFG~a~~~~~~  181 (434)
T 2rio_A          168 LISDFGLCKKLDSG  181 (434)
T ss_dssp             EECCCTTCEECCC-
T ss_pred             EEcccccceecCCC
Confidence            99999999876543

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.51  E-value=4e-14  Score=87.17  Aligned_cols=71  Identities=17%  Similarity=0.251  Sum_probs=61.6

Q ss_pred             CCCCHHHH------Hhhc-ccccCHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            4 SGVNFYNH------SKKS-AKILLEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         4 ~g~~l~~~------l~~~-~~~l~~~~~~~~~~~i~~~l~~~h~-~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      .|++|.++      +... ...+++..+..++.|++.|+.|+|+ ++++|+|++++||++    +.+..++|+|||.+..
T Consensus       126 ~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~----~~~~~~kl~dfg~~~~  201 (348)
T 2pml_X          126 ENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM----DKNGRVKLSDFGESEY  201 (348)
T ss_dssp             TTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEE----CTTSCEEECCCTTCEE
T ss_pred             CCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEE----cCCCcEEEeccccccc
Confidence            46688887      5542 3559999999999999999999999 999999999999999    7778999999999987


Q ss_pred             ecc
Q 038072           76 HER   78 (97)
Q Consensus        76 ~~~   78 (97)
                      ...
T Consensus       202 ~~~  204 (348)
T 2pml_X          202 MVD  204 (348)
T ss_dssp             CBT
T ss_pred             ccc
Confidence            644

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.50  E-value=4.6e-14  Score=86.37  Aligned_cols=74  Identities=23%  Similarity=0.244  Sum_probs=61.0

Q ss_pred             CCCCCCCHHHHHhh----cccccCHHHHHHHHHHHHHHHHHHHHc-CccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            1 MASSGVNFYNHSKK----SAKILLEHEVRRYTRDILRGLDHIHSH-GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         1 m~~~g~~l~~~l~~----~~~~l~~~~~~~~~~~i~~~l~~~h~~-~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      |+...++|.+++..    ....+++..+..++.|++.++.++|+. +++|+|++++||++    +.+..++|+|||+++.
T Consensus       100 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll----~~~~~~kl~Dfg~~~~  175 (327)
T 3aln_A          100 MELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILL----DRSGNIKLCDFGISGQ  175 (327)
T ss_dssp             ECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEE----ETTTEEEECCCSSSCC
T ss_pred             EeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEE----cCCCCEEEccCCCcee
Confidence            35556788887763    235589999999999999999999998 99999999999999    6678899999999976


Q ss_pred             ecc
Q 038072           76 HER   78 (97)
Q Consensus        76 ~~~   78 (97)
                      ...
T Consensus       176 ~~~  178 (327)
T 3aln_A          176 LVD  178 (327)
T ss_dssp             ---
T ss_pred             ccc
Confidence            543

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.50  E-value=7.2e-15  Score=95.74  Aligned_cols=61  Identities=15%  Similarity=0.118  Sum_probs=53.9

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .|++|.+++..         +..++.|++.++.|+|+++++|+|+||+||++    +.  .+||+|||+++.....
T Consensus       422 ~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl----~~--~~kL~DFGla~~~~~~  482 (540)
T 3en9_A          422 NGKLAKDVIED---------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIF----DK--DLYIIDFGLGKISNLD  482 (540)
T ss_dssp             CSEEHHHHSTT---------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEE----SS--SEEECCCTTCEECCCH
T ss_pred             CCCCHHHHHHH---------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEE----CC--eEEEEECccCEECCCc
Confidence            47899998876         45788999999999999999999999999999    54  9999999999987653

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.48  E-value=1.9e-13  Score=90.98  Aligned_cols=75  Identities=24%  Similarity=0.325  Sum_probs=63.2

Q ss_pred             CCCCHHHHHhhccc--ccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            4 SGVNFYNHSKKSAK--ILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         4 ~g~~l~~~l~~~~~--~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .|++|.+++.....  .+++..+..++.+++.|+.|+|+.+++|+|++++||++... .....++|+|||++......
T Consensus       101 ~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~-g~~~~vKL~DFG~a~~~~~~  177 (676)
T 3qa8_A          101 EGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPG-PQRLIHKIIDLGYAKELDQG  177 (676)
T ss_dssp             SSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECC-SSSCEEEECSCCCCCBTTSC
T ss_pred             CCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecC-CCceeEEEcccccccccccc
Confidence            48899999987432  48999999999999999999999999999999999999542 23456899999999876543

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.47  E-value=2.9e-13  Score=80.57  Aligned_cols=69  Identities=14%  Similarity=0.318  Sum_probs=60.0

Q ss_pred             CCCCCHHHHHhhccc-ccCHHHHHHHHHHHHHHHHHHHHcC--ccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            3 SSGVNFYNHSKKSAK-ILLEHEVRRYTRDILRGLDHIHSHG--VAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~-~l~~~~~~~~~~~i~~~l~~~h~~~--~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      +.|++|.+++..... .+++..+..++.|++.|+.|+|+++  ++|+|++++||++    +.+..+++.||+++..
T Consensus        91 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~----~~~~~~~l~~~~~~~~  162 (271)
T 3kmu_A           91 MPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMI----DEDMTARISMADVKFS  162 (271)
T ss_dssp             CTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEE----CTTSCEEEEGGGSCCT
T ss_pred             cCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEE----cCCcceeEEeccceee
Confidence            347899999987643 4899999999999999999999999  9999999999999    6677888888877643

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.47  E-value=3e-13  Score=82.39  Aligned_cols=71  Identities=24%  Similarity=0.359  Sum_probs=56.4

Q ss_pred             CCCCHHHHHhhccc--ccCHHHHHHHHHHHHHHHHHHHH---cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072            4 SGVNFYNHSKKSAK--ILLEHEVRRYTRDILRGLDHIHS---HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus         4 ~g~~l~~~l~~~~~--~l~~~~~~~~~~~i~~~l~~~h~---~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .|++|.+++.....  .+++..+..++.|++.++.|+|+   ++++|+|++++||++.   .....++|+|||++....
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~---~~~~~~kl~Dfg~~~~~~  157 (307)
T 2eva_A           82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV---AGGTVLKICDFGTACDIQ  157 (307)
T ss_dssp             TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEE---TTTTEEEECCCCC-----
T ss_pred             CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEe---CCCCEEEEcccccccccc
Confidence            47899999986532  27889999999999999999999   8999999999999994   223458999999997654

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.37  E-value=5e-13  Score=79.92  Aligned_cols=62  Identities=13%  Similarity=0.215  Sum_probs=50.6

Q ss_pred             CHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH-HcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            7 NFYNHSKKSAKILLEHEVRRYTRDILRGLDHIH-SHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         7 ~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h-~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +|.++...    .++..+..++.|++.++.++| +++++|+|++|.||++    ..  .++|+|||+|.....
T Consensus       159 ~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl----~~--~~~liDFG~a~~~~~  221 (258)
T 1zth_A          159 TLVELGRE----LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMY----ID--KVYFIDMGQAVTLRH  221 (258)
T ss_dssp             BHHHHGGG----GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEE----SS--SEEECCCTTCEETTS
T ss_pred             cHHHHhhc----cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEE----cC--cEEEEECcccccCCC
Confidence            55555432    234567888999999999999 9999999999999999    54  899999999987543

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.31  E-value=4e-12  Score=76.98  Aligned_cols=62  Identities=13%  Similarity=0.131  Sum_probs=51.1

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .|++|.+ +..       .....++.|++.++.++|+++++|+|+||+||++    . +..++|+|||+|+....
T Consensus       183 ~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl----~-~~~vkl~DFG~a~~~~~  244 (282)
T 1zar_A          183 DAKELYR-VRV-------ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLV----S-EEGIWIIDFPQSVEVGE  244 (282)
T ss_dssp             CCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE----E-TTEEEECCCTTCEETTS
T ss_pred             CCCcHHH-cch-------hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEE----E-CCcEEEEECCCCeECCC
Confidence            4677877 422       2344689999999999999999999999999999    6 77899999999986543

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.30  E-value=5.4e-12  Score=76.36  Aligned_cols=63  Identities=13%  Similarity=0.015  Sum_probs=53.8

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCce
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDK   73 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a   73 (97)
                      .|++|.++++..   ....++..++.|++.++.|+|+++++|+|+|++||++    ..+..++|.+++..
T Consensus       114 ~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll----~~~g~~kl~~~~~~  176 (286)
T 3uqc_A          114 RGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRV----SIDGDVVLAYPATM  176 (286)
T ss_dssp             CEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE----ETTSCEEECSCCCC
T ss_pred             CCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEE----cCCCCEEEEecccc
Confidence            578999999653   4666788899999999999999999999999999999    66778888876654

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.65  E-value=2.9e-08  Score=62.77  Aligned_cols=53  Identities=19%  Similarity=0.214  Sum_probs=41.2

Q ss_pred             HHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCC---C---CceEEEeecCceee
Q 038072           23 EVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKD---A---GFMAKIVARGDKCL   75 (97)
Q Consensus        23 ~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~---~---~~~~~i~dfg~a~~   75 (97)
                      .+..+..|++.++.++|+++++|+|+||.||+++....   .   ...+.|.||+=+..
T Consensus       206 ~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          206 DPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence            44567899999999999999999999999999964211   0   12478999986643

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=97.57  E-value=0.00024  Score=44.03  Aligned_cols=36  Identities=17%  Similarity=0.271  Sum_probs=27.2

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ..++|+|+++.||++.+.  ....+.|.||+.+....+
T Consensus       216 ~~lvHgD~~~~Nil~~~~--~~~v~~viDwe~a~~g~p  251 (359)
T 3dxp_A          216 TSIVHGDYRLDNLMFHPT--EPRVLAVLDWELSTLGHP  251 (359)
T ss_dssp             CEEECSSCSGGGEEECSS--SSCEEEECCCTTCEEECH
T ss_pred             ceEEeCCCCCCcEEEeCC--CCcEEEEECccccccCCH
Confidence            368999999999999421  113468999999987654

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=97.56  E-value=0.00012  Score=42.89  Aligned_cols=34  Identities=24%  Similarity=0.338  Sum_probs=27.7

Q ss_pred             CccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072           42 GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus        42 ~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +++|+|+++.||++    .++..+.+.||+.+....+.
T Consensus       185 ~l~HgDl~~~Nil~----~~~~~~~liD~~~a~~g~~~  218 (264)
T 1nd4_A          185 VVTHGDACLPNIMV----ENGRFSGFIDCGRLGVADRY  218 (264)
T ss_dssp             EEECSSCCGGGEEE----ETTEEEEECCCTTCEEEETH
T ss_pred             EEECCCCCCCcEEE----ECCcEEEEEcchhcccCChH
Confidence            49999999999999    44556679999998876643

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.52  E-value=0.00022  Score=42.20  Aligned_cols=35  Identities=14%  Similarity=0.217  Sum_probs=28.1

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      ..++|.|+++.||++    .++..+.|.||+.+....+.
T Consensus       183 ~~l~HgDl~~~Nil~----~~~~~~~lIDwe~a~~gd~~  217 (263)
T 3tm0_A          183 LVFSHGDLGDSNIFV----KDGKVSGFIDLGRSGRADKW  217 (263)
T ss_dssp             EEEECSSCCTTSEEE----ETTEEEEECCCTTCEEEEHH
T ss_pred             ceEECCCCCcCcEEE----ECCcEEEEEEchhcccCCHH
Confidence            458999999999999    44556679999998776543

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=96.74  E-value=0.0052  Score=37.18  Aligned_cols=37  Identities=19%  Similarity=0.344  Sum_probs=28.6

Q ss_pred             CccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072           42 GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus        42 ~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      .++|.|+.+.|+++.+  .....+.+.||+.+....+..
T Consensus       192 ~~~HgD~~~~N~l~~~--~~~~~~~~iD~~~~~~~~~~~  228 (304)
T 3sg8_A          192 CLIHNDFSSDHILFDT--EKNTICGIIDFGDAAISDPDN  228 (304)
T ss_dssp             EEECSCCCGGGEEEET--TTTEEEEECCCTTCEEECTTH
T ss_pred             eeEeCCCCcccEEEeC--CCCCEEEEEeCCCCccCChHH
Confidence            5799999999999942  115668899999998776543

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=96.65  E-value=0.0078  Score=36.61  Aligned_cols=34  Identities=12%  Similarity=0.058  Sum_probs=28.6

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|+|+.+.|+++    ..+..+.+.||+.+....+
T Consensus       222 ~~l~HgD~~~~Nil~----~~~~~~~lIDfe~a~~g~~  255 (346)
T 2q83_A          222 PNLCHQDYGTGNTLL----GENEQIWVIDLDTVSFDLP  255 (346)
T ss_dssp             CCEECSSCSTTSEEE----CGGGCEEECCCTTCEECCT
T ss_pred             CceecCCCCcccEEE----eCCCcEEEEehhhcccCCh
Confidence            579999999999999    5567789999999876544

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=95.80  E-value=0.015  Score=36.81  Aligned_cols=36  Identities=3%  Similarity=0.118  Sum_probs=29.1

Q ss_pred             HHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072           39 HSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus        39 h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +...++|.|+.+.||++    ..+. +.+.||+.+....+.
T Consensus       230 ~~~~liHGDl~~~Nil~----~~~~-~~lID~e~a~~G~p~  265 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMV----TQDS-TQVIDPEFSFYGPMG  265 (420)
T ss_dssp             BCCEEECSCCSGGGEEE----CSSC-EEECCCTTCEEECHH
T ss_pred             CCCeEEecCCCCCcEEE----eCCC-CEEEeCcccccCchH
Confidence            35679999999999999    4333 899999999876643

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=95.06  E-value=0.041  Score=33.45  Aligned_cols=43  Identities=14%  Similarity=0.124  Sum_probs=30.6

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcce
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLLN   83 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~~   83 (97)
                      ..++|.|+.+.|+++...........|.||+.+....+.....
T Consensus       190 ~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd~~~Dla  232 (306)
T 3tdw_A          190 PRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPDYDYV  232 (306)
T ss_dssp             CEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEECGGGGGH
T ss_pred             CeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCCHHHHHH
Confidence            3689999999999994211113445899999998877654443

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=94.92  E-value=0.022  Score=33.59  Aligned_cols=37  Identities=27%  Similarity=0.392  Sum_probs=29.4

Q ss_pred             CccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072           42 GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus        42 ~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      .++|.|+.+.|+++    .+...+-|.||+.+....+.-..
T Consensus       194 ~l~HGDl~~~Nil~----~~~~~~~viDwe~a~~gdp~~Dl  230 (272)
T 4gkh_A          194 VVTHGDFSLDNLIF----DEGKLIGCIDVGRVGIADRYQDL  230 (272)
T ss_dssp             EEECSCCCTTSEEE----ETTEEEEECCCTTCEEEETHHHH
T ss_pred             EEEcCCCCCCeEEE----ECCeEEEEEECcccccCCHHHHH
Confidence            47999999999999    55566779999999887664433

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=94.59  E-value=0.025  Score=34.54  Aligned_cols=41  Identities=17%  Similarity=0.148  Sum_probs=29.8

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCc
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGL   81 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~   81 (97)
                      ..++|+|+.+.||++.........+.+.||+.+....+.-.
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~~~D  223 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHRAYD  223 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECTTHH
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCCHHH
Confidence            47999999999999932101125789999999987665433

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=94.29  E-value=0.022  Score=34.56  Aligned_cols=34  Identities=18%  Similarity=0.212  Sum_probs=27.0

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.|+.+.|+++    ..+..+.+.||+.+.....
T Consensus       187 ~~liHgDl~~~Nil~----~~~~~~~lIDf~~a~~g~~  220 (322)
T 2ppq_A          187 AGVIHADLFQDNVFF----LGDELSGLIDFYFACNDLL  220 (322)
T ss_dssp             EEEECSCCCGGGEEE----ETTEEEEECCCTTCEEEEH
T ss_pred             cccCCCCCCccCEEE----eCCceEEEecchhccCchh
Confidence            468999999999999    4445567999998876543

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=93.85  E-value=0.033  Score=34.31  Aligned_cols=36  Identities=11%  Similarity=0.026  Sum_probs=28.6

Q ss_pred             HcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072           40 SHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus        40 ~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      ...++|.|+.+.||++    .+...+.|.||+.+....+.
T Consensus       221 ~~~l~HgDl~~~Nil~----~~~~~~~vIDwe~a~~g~p~  256 (357)
T 3ats_A          221 EPVLLWGDARVGNVLY----RDFQPVAVLDWEMVALGPRE  256 (357)
T ss_dssp             CCEEECSSCSGGGEEE----ETTEEEEECCGGGCEEECHH
T ss_pred             CceEEeCCCCCCeEEE----eCCcEEEEEcccccccCCcH
Confidence            3478999999999999    44455789999998876543

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=93.62  E-value=0.14  Score=31.08  Aligned_cols=33  Identities=18%  Similarity=-0.040  Sum_probs=27.0

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      ..++|.|+.+.||++    . + .+.+.||+.+......
T Consensus       195 ~~l~HgD~~~~Nil~----~-~-~~~lIDfe~a~~g~~~  227 (328)
T 1zyl_A          195 VLRLHGDCHAGNILW----R-D-GPMFVDLDDARNGPAV  227 (328)
T ss_dssp             CEECCSSCSGGGEEE----S-S-SEEECCCTTCCEECTT
T ss_pred             eeeeeCCCCcccEeE----c-C-CCEEEECCCCCcCcHH
Confidence            458999999999999    5 3 7899999988766543

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=92.33  E-value=0.21  Score=30.82  Aligned_cols=37  Identities=16%  Similarity=0.158  Sum_probs=29.6

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCc
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGL   81 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~   81 (97)
                      ..++|.|+.+.|+++    ..+..+.+.||..+....+...
T Consensus       206 ~~~~HgD~~~~N~l~----~~~~~~~~iD~e~~~~~~~~~D  242 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLV----GNEESIYIIDWDEPMLAPKERD  242 (339)
T ss_dssp             CEEECSCCCGGGEEE----CGGGCEEECCCSSCEEECTHHH
T ss_pred             ceeEeCCCCcCCEEE----eCCCeEEEEECCCCeeCCHHHH
Confidence            468999999999999    5456789999998887665433

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=91.15  E-value=0.16  Score=31.80  Aligned_cols=36  Identities=8%  Similarity=0.006  Sum_probs=28.3

Q ss_pred             HcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072           40 SHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus        40 ~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      ...++|.|+.+.||++.    .+ .+.+.||..+....+..
T Consensus       226 ~~~L~HGDl~~~Nil~~----~~-~~~lID~e~a~~G~p~~  261 (397)
T 2olc_A          226 AETLIHGDLHTGSIFAS----EH-ETKVIDPEFAFYGPIGF  261 (397)
T ss_dssp             CCEEECSCCSGGGEEEC----SS-CEEECCCTTCEEECTHH
T ss_pred             CCceeeCCCCcCcEEEe----CC-CeEEEeCcccccCChHH
Confidence            35799999999999993    32 48899999888766543

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=90.59  E-value=0.16  Score=31.52  Aligned_cols=33  Identities=9%  Similarity=0.042  Sum_probs=25.9

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.|+.+.|+++    ..+ .+.+.||..+....+
T Consensus       212 ~~l~HgDl~~~Nil~----~~~-~~~lID~e~a~~g~~  244 (369)
T 3c5i_A          212 IVFCHNDLQENNIIN----TNK-CLRLIDFEYSGFNFL  244 (369)
T ss_dssp             EEEECSCCCGGGEEE----CC--CEEECCCTTCEEEEH
T ss_pred             eEEEeCCCCcccEEe----cCC-cEEEEEecCCCCCch
Confidence            368999999999998    433 379999998876554

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=88.77  E-value=0.34  Score=31.41  Aligned_cols=40  Identities=23%  Similarity=0.265  Sum_probs=28.8

Q ss_pred             CccccCCCCCcEEEeeCC---------------------------------CCCceEEEeecCceeeeccCCc
Q 038072           42 GVAHCGIKLDNILLVPGK---------------------------------DAGFMAKIVARGDKCLHERHGL   81 (97)
Q Consensus        42 ~~~~~~l~~~~i~~~~~~---------------------------------~~~~~~~i~dfg~a~~~~~~~~   81 (97)
                      .++|.|+.+.||++....                                 .....+.+.||..|....+.-.
T Consensus       291 v~cHnDl~~gNIL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lIDfEya~~gdp~~D  363 (458)
T 2qg7_A          291 VLCHCDLLSSNIINTVGGGEAGELGEAGETGEGGETGEGGETGEGGETGEGGEGDSISFIDFEYSCPMERAYD  363 (458)
T ss_dssp             EEECSCCCGGGEEECCC-----------------------------------CCCCEEECCCTTCEEEEHHHH
T ss_pred             eEEecCCCCCcEEeecccccccccccccccccccccccccccccccccccCCCCCeEEEEeecCCCCCCcHHH
Confidence            689999999999995100                                 0345689999998887655433

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=88.23  E-value=0.23  Score=31.77  Aligned_cols=38  Identities=18%  Similarity=0.133  Sum_probs=26.6

Q ss_pred             CccccCCCCCcEEEeeCCC------------------------CCceEEEeecCceeeeccC
Q 038072           42 GVAHCGIKLDNILLVPGKD------------------------AGFMAKIVARGDKCLHERH   79 (97)
Q Consensus        42 ~~~~~~l~~~~i~~~~~~~------------------------~~~~~~i~dfg~a~~~~~~   79 (97)
                      .++|.|+.+.||++...+.                        ....+.+.||..|....+.
T Consensus       250 v~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~~g~p~  311 (429)
T 1nw1_A          250 TFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASYNYRA  311 (429)
T ss_dssp             EEECSCCCGGGEEEEC------------------------------CCEECCCTTCEEEEHH
T ss_pred             EEEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecccCCcCccH
Confidence            5899999999999953200                        0156899999988765543

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=86.83  E-value=0.4  Score=30.31  Aligned_cols=39  Identities=21%  Similarity=0.126  Sum_probs=28.2

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      ..++|.|+.+.|+++.........+.+.||..+....+.
T Consensus       220 ~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~~~~  258 (379)
T 3feg_A          220 VVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYNYRG  258 (379)
T ss_dssp             EEEECSCCCGGGEEEESCC---CCEEECCCTTCEEEEHH
T ss_pred             cEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCcCChH
Confidence            368999999999999532112357899999998865543

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=85.37  E-value=0.75  Score=27.64  Aligned_cols=33  Identities=21%  Similarity=0.211  Sum_probs=26.0

Q ss_pred             CccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072           42 GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus        42 ~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .++|.|+.+.|++.    . +..+.+.||..+....+.
T Consensus       174 ~l~HgDl~~~Nil~----~-~~~~~lID~e~a~~g~~~  206 (301)
T 3dxq_A          174 AACHCDPLCENFLD----T-GERMWIVDWEYSGMNDPL  206 (301)
T ss_dssp             EEECSCCCGGGEEE----C-SSCEEECCCTTCEEECTH
T ss_pred             eeeccCCCcCCEEE----C-CCCEEEEecccccCCCHH
Confidence            58999999999995    3 235699999988776543

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=83.66  E-value=5  Score=23.76  Aligned_cols=50  Identities=8%  Similarity=-0.045  Sum_probs=35.6

Q ss_pred             CCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc-CccccCCCCCcEEE
Q 038072            6 VNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSH-GVAHCGIKLDNILL   55 (97)
Q Consensus         6 ~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~-~~~~~~l~~~~i~~   55 (97)
                      -+|.++|+..+.+++|.+++.++.|.+.++.-.-.+ .-..+=..+..|++
T Consensus        33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l   83 (229)
T 2yle_A           33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRV   83 (229)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEE
T ss_pred             ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEE
Confidence            579999998888899999999999999887765321 11122224456666

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=82.59  E-value=1  Score=28.42  Aligned_cols=37  Identities=19%  Similarity=0.188  Sum_probs=28.1

Q ss_pred             CccccCCCCCcEEEeeCC--CCCceEEEeecCceeeecc
Q 038072           42 GVAHCGIKLDNILLVPGK--DAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        42 ~~~~~~l~~~~i~~~~~~--~~~~~~~i~dfg~a~~~~~   78 (97)
                      .++|.|+...||++.+..  .....+.+.||-.|....+
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n~~  283 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYR  283 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEEEH
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccCCCc
Confidence            367999999999985421  3456789999998876554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	97
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	6e-10
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-09
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-09
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-09
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-09
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	6e-09
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	7e-09
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-08
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-08
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	5e-08
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	5e-08
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	6e-08
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	8e-08
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	8e-08
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-07
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-07
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-07
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-07
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-07
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-07
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	3e-07
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	4e-07
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	5e-07
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	7e-07
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	8e-07
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	9e-07
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-06
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-06
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-06
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-06
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-06
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-06
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-06
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-06
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	4e-06
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-06
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	5e-06
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	6e-06
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	9e-06
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-05
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-05
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-05
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-05
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-05
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	5e-05
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	6e-05
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-04
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-04
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-04
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-04
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-04
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	4e-04
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-04
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	8e-04
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	0.003

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 52.0 bits (124), Expect = 6e-10
 Identities = 14/57 (24%), Positives = 24/57 (42%)

Query: 4   SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKD 60
           SG   +         + E E   Y R + +GL H+H +   H  +K +NI+    + 
Sbjct: 106 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRS 162

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.9 bits (121), Expect = 2e-09
 Identities = 11/67 (16%), Positives = 24/67 (35%)

Query: 13  KKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGD 72
            +  +   E E     + I   + ++HS  +AH  +K +N+L    +    +        
Sbjct: 102 DRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 161

Query: 73  KCLHERH 79
           K     +
Sbjct: 162 KETTSHN 168

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 3e-09
 Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 4/81 (4%)

Query: 4   SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPG---KD 60
           +G        +  + L E +++   +  L  L+++H + + H  +K  NIL       K 
Sbjct: 92  AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKL 151

Query: 61  AGF-MAKIVARGDKCLHERHG 80
           A F ++    R  +      G
Sbjct: 152 ADFGVSAKNTRTIQRRDSFIG 172

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 50.0 bits (119), Expect = 3e-09
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)

Query: 9   YNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKI 67
            +  +   K L E E+   T   L+GL ++HSH + H  +K  NILL        + K+
Sbjct: 102 SDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL----SEPGLVKL 156

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 50.1 bits (119), Expect = 3e-09
 Identities = 18/57 (31%), Positives = 25/57 (43%)

Query: 4   SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKD 60
           SG   ++        + E EV  Y R    GL H+H H + H  IK +NI+    K 
Sbjct: 109 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKA 165

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.8 bits (116), Expect = 6e-09
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 14  KSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           +      E     Y  ++   L + HS  V H  IK +N+LL
Sbjct: 98  QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL 139

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.0 bits (116), Expect = 7e-09
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 4/66 (6%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG 80
           E ++R Y  +I+ GL+H+H+  V +  +K  NILL    D     +I   G  C   +  
Sbjct: 106 EADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL----DEHGHVRISDLGLACDFSKKK 161

Query: 81  LLNVTG 86
                G
Sbjct: 162 PHASVG 167

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (113), Expect = 2e-08
 Identities = 16/58 (27%), Positives = 28/58 (48%)

Query: 4   SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDA 61
           SG++ +     SA  L E E+  Y   +   L  +HSH + H  I+ +NI+    + +
Sbjct: 84  SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSS 141

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 46.6 bits (110), Expect = 4e-08
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 14  KSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
                L E E R+  R +L  +  +H   + H  +K +NILL
Sbjct: 102 TEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL 143

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (109), Expect = 5e-08
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 5/79 (6%)

Query: 1   MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPG-- 58
           +  +      H  ++ + L    V+ Y   + R L +IHS G+ H  IK  N+LL P   
Sbjct: 101 VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTA 160

Query: 59  --KDAGF-MAKIVARGDKC 74
             K   F  AK + RG+  
Sbjct: 161 VLKLCDFGSAKQLVRGEPN 179

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.3 bits (109), Expect = 5e-08
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 17  KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
               E   R Y   I+   +++HS  + +  +K +N+L+
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (109), Expect = 6e-08
 Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 4/64 (6%)

Query: 4   SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGF 63
            G + Y+H           ++    R   +G+D++H+  + H  +K +NI L        
Sbjct: 86  EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDL 141

Query: 64  MAKI 67
             KI
Sbjct: 142 TVKI 145

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 8e-08
 Identities = 15/51 (29%), Positives = 22/51 (43%)

Query: 5   GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
                   K     +    ++     +LRGLD +HSH V H  +K  NIL+
Sbjct: 99  QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV 149

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (108), Expect = 8e-08
 Identities = 5/45 (11%), Positives = 19/45 (42%)

Query: 11  HSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
             ++   +L   ++  +   + +G++ +      H  +   N+L+
Sbjct: 153 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV 197

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (107), Expect = 1e-07
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL-----VPGKDAGFMAKIVARGDK 73
           E ++    R+ L+ L+ +HS+ V H  IK DNILL     V   D GF A+I     K
Sbjct: 115 EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 1e-07
 Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 4/71 (5%)

Query: 9   YNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV 68
           +  +  +A  L   ++  +  D+ RG+D++      H  +   NIL+       ++AKI 
Sbjct: 114 FAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV----GENYVAKIA 169

Query: 69  ARGDKCLHERH 79
             G     E +
Sbjct: 170 DFGLSRGQEVY 180

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (106), Expect = 2e-07
 Identities = 11/42 (26%), Positives = 24/42 (57%)

Query: 14  KSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           +    + E + +R+   ++ G+ ++H  G+ H  IK +N+LL
Sbjct: 95  EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 136

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (104), Expect = 3e-07
 Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 14  KSAKILLEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILL 55
           K A  + E  + + +  +++GL ++   H + H  +K  NIL+
Sbjct: 96  KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 138

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.5 bits (104), Expect = 3e-07
 Identities = 10/58 (17%), Positives = 17/58 (29%), Gaps = 4/58 (6%)

Query: 10  NHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKI 67
             S      L   E     R +  G+ ++      H  +   N L+        + KI
Sbjct: 128 RVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV----GENMVVKI 181

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (104), Expect = 3e-07
 Identities = 10/52 (19%), Positives = 20/52 (38%)

Query: 4   SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
              +  +  +K     L   + RY   +  G+ ++ S    H  +   N+LL
Sbjct: 93  PLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL 144

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 3e-07
 Identities = 13/74 (17%), Positives = 23/74 (31%), Gaps = 4/74 (5%)

Query: 17  KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLH 76
             L    +  Y+  + +G++ + S    H  +   NILL        + KI   G     
Sbjct: 129 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL----SEKNVVKICDFGLARDI 184

Query: 77  ERHGLLNVTGVGEG 90
            +       G    
Sbjct: 185 YKDPDYVRKGDARL 198

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (103), Expect = 4e-07
 Identities = 10/51 (19%), Positives = 17/51 (33%)

Query: 5   GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           G         S   L  +++      I  G+  I      H  ++  NIL+
Sbjct: 92  GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV 142

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.6 bits (102), Expect = 5e-07
 Identities = 9/83 (10%), Positives = 22/83 (26%), Gaps = 4/83 (4%)

Query: 5   GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFM 64
           G       + + + +    +      I   ++++      H  +   N L+        +
Sbjct: 98  GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV----GENHL 153

Query: 65  AKIVARGDKCLHERHGLLNVTGV 87
            K+   G   L          G 
Sbjct: 154 VKVADFGLSRLMTGDTYTAHAGA 176

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 43.3 bits (101), Expect = 7e-07
 Identities = 10/51 (19%), Positives = 19/51 (37%)

Query: 5   GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           G +  +      +      V    + +L  +  IH   + +  IK DN L+
Sbjct: 84  GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLI 134

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (101), Expect = 8e-07
 Identities = 14/83 (16%), Positives = 27/83 (32%), Gaps = 4/83 (4%)

Query: 5   GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFM 64
           G        ++ K L   ++      I  G+ ++      H  ++  NIL+        +
Sbjct: 96  GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV----GENLV 151

Query: 65  AKIVARGDKCLHERHGLLNVTGV 87
            K+   G   L E +      G 
Sbjct: 152 CKVADFGLARLIEDNEYTARQGA 174

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 9e-07
 Identities = 5/43 (11%), Positives = 20/43 (46%)

Query: 13  KKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
            +   +L    + +++ D+   ++++  +   H  +   N+L+
Sbjct: 94  SRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV 136

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 1e-06
 Identities = 9/40 (22%), Positives = 18/40 (45%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPG 58
           L   ++  ++  + +G+  + S    H  +   NILL  G
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG 181

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.4 bits (99), Expect = 1e-06
 Identities = 9/68 (13%), Positives = 25/68 (36%), Gaps = 4/68 (5%)

Query: 4   SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGF 63
              +  +  +++       ++    R I  G+ ++      H  +   NIL+    ++  
Sbjct: 110 ENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV----NSNL 165

Query: 64  MAKIVARG 71
           + K+   G
Sbjct: 166 VCKVSDFG 173

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (99), Expect = 1e-06
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 17  KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
               E   R YT +I+  L+++H  G+ H  +K +NILL
Sbjct: 103 GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 141

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 1e-06
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           L    +  +   ILRGL +IHS  V H  +K  N+LL
Sbjct: 106 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 142

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (98), Expect = 2e-06
 Identities = 10/70 (14%), Positives = 22/70 (31%), Gaps = 4/70 (5%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG 80
              +  +   I +G++++    + H  +   N+L+          KI   G   L     
Sbjct: 110 SQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEE 165

Query: 81  LLNVTGVGEG 90
                  G+ 
Sbjct: 166 KEYHAEGGKV 175

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (98), Expect = 2e-06
 Identities = 13/37 (35%), Positives = 22/37 (59%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
             E   R Y  +I+  L+++HS  V +  IKL+N++L
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML 138

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.6 bits (97), Expect = 2e-06
 Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARG 71
               + Y  ++   L+++HS  + +  +K +NILL    D     KI   G
Sbjct: 103 NPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL----DKNGHIKITDFG 149

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 3e-06
 Identities = 10/73 (13%), Positives = 24/73 (32%), Gaps = 7/73 (9%)

Query: 5   GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFM 64
                   ++        ++    R I  G+ ++ +    H  +   NIL+    ++  +
Sbjct: 93  NGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV----NSNLV 148

Query: 65  AKIVARGDKCLHE 77
            K+    D  L  
Sbjct: 149 CKV---SDFGLSR 158

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 41.0 bits (95), Expect = 4e-06
 Identities = 13/39 (33%), Positives = 26/39 (66%)

Query: 17  KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           + L ++++R Y  +IL+ LD+ HS G+ H  +K  N+++
Sbjct: 124 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 162

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 4e-06
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 3/73 (4%)

Query: 14  KSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDK 73
                L E   R +   +L  + H H+ GV H  IK +NIL+   +      K++  G  
Sbjct: 102 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR---GELKLIDFGSG 158

Query: 74  CLHERHGLLNVTG 86
            L +     +  G
Sbjct: 159 ALLKDTVYTDFDG 171

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 40.6 bits (94), Expect = 5e-06
 Identities = 14/73 (19%), Positives = 27/73 (36%)

Query: 5   GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFM 64
           G +  +     ++      V      ++  +++IHS    H  +K DN L+  GK    +
Sbjct: 86  GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV 145

Query: 65  AKIVARGDKCLHE 77
             I     K   +
Sbjct: 146 YIIDFGLAKKYRD 158

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 6e-06
 Identities = 7/52 (13%), Positives = 16/52 (30%)

Query: 4   SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
            G   +       + +    V      +  G+ ++      H  +   N+LL
Sbjct: 91  GGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL 142

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 9e-06
 Identities = 10/47 (21%), Positives = 21/47 (44%)

Query: 9   YNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           YN S    + L   ++      + RG++++ S    H  +   N+L+
Sbjct: 122 YNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 168

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 1e-05
 Identities = 11/37 (29%), Positives = 21/37 (56%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           L E  ++     +L+GL +IH+ G+ H  +K  N+ +
Sbjct: 118 LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV 154

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 1e-05
 Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 4/82 (4%)

Query: 7   NFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAK 66
           +     K ++ +L    ++ Y    L+GL+++H H + H  +K +N+LL    D   + K
Sbjct: 85  DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL----DENGVLK 140

Query: 67  IVARGDKCLHERHGLLNVTGVG 88
           +   G               V 
Sbjct: 141 LADFGLAKSFGSPNRAYTHQVV 162

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (90), Expect = 2e-05
 Identities = 10/84 (11%), Positives = 24/84 (28%), Gaps = 4/84 (4%)

Query: 4   SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGF 63
                 ++ +    +     +     D+  G+ ++    V H  +   N L+        
Sbjct: 83  EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV----GENQ 138

Query: 64  MAKIVARGDKCLHERHGLLNVTGV 87
           + K+   G           + TG 
Sbjct: 139 VIKVSDFGMTRFVLDDQYTSSTGT 162

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (89), Expect = 3e-05
 Identities = 8/52 (15%), Positives = 17/52 (32%)

Query: 4   SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           +     +  +     L    +  Y   +   L ++ S    H  I   N+L+
Sbjct: 90  TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 141

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (89), Expect = 3e-05
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 14  KSAKILLEHEVRRYTRDILRGLDHIHSHG--VAHCGIKLDNILL 55
           K  K++    +R + R IL+GL  +H+    + H  +K DNI +
Sbjct: 104 KRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFI 147

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 5e-05
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 5/67 (7%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL-----VPGKDAGFMAKIVARGDK 73
             EHEV+ Y  +I+  L+H+H  G+ +  IKL+NILL     V   D G   + VA   +
Sbjct: 126 FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE 185

Query: 74  CLHERHG 80
             ++  G
Sbjct: 186 RAYDFCG 192

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 6e-05
 Identities = 13/54 (24%), Positives = 18/54 (33%), Gaps = 5/54 (9%)

Query: 7   NFYNHSKKSAKILLEHEVRRYTRDILRGLDHIH-----SHGVAHCGIKLDNILL 55
           +      K  + L E  V R    +   L   H      H V H  +K  N+ L
Sbjct: 94  SVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 147

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 1e-04
 Identities = 10/68 (14%), Positives = 22/68 (32%), Gaps = 4/68 (5%)

Query: 4   SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGF 63
              +  N  +         ++  +   + +G+  + S    H  +   N +L    D  F
Sbjct: 112 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML----DEKF 167

Query: 64  MAKIVARG 71
             K+   G
Sbjct: 168 TVKVADFG 175

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 1e-04
 Identities = 9/80 (11%), Positives = 26/80 (32%), Gaps = 4/80 (5%)

Query: 9   YNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIV 68
            N+ ++        ++    +D+   ++++ S    H  +   N L+    +   + K+ 
Sbjct: 87  LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV----NDQGVVKVS 142

Query: 69  ARGDKCLHERHGLLNVTGVG 88
             G           +  G  
Sbjct: 143 DFGLSRYVLDDEYTSSVGSK 162

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 1e-04
 Identities = 17/55 (30%), Positives = 29/55 (52%)

Query: 17  KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARG 71
           + L E E   + + IL G+ ++HS  +AH  +K +NI+L+         KI+  G
Sbjct: 108 ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 162

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.2 bits (83), Expect = 2e-04
 Identities = 9/49 (18%), Positives = 19/49 (38%)

Query: 14  KSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAG 62
                  E +  R    +L  + ++H  G+ H  +K +N+L     +  
Sbjct: 99  VEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDS 147

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (82), Expect = 2e-04
 Identities = 11/34 (32%), Positives = 21/34 (61%)

Query: 22  HEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
            E++R  + +L GL +IH + + H  +K  N+L+
Sbjct: 117 SEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI 150

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (81), Expect = 4e-04
 Identities = 6/39 (15%), Positives = 15/39 (38%)

Query: 19  LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVP 57
           + +  +      +  G+ ++      H  +   N+LLV 
Sbjct: 104 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT 142

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 34.9 bits (79), Expect = 5e-04
 Identities = 9/49 (18%), Positives = 18/49 (36%)

Query: 7   NFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
           +           L     + +   +L G+ + H   V H  +K  N+L+
Sbjct: 85  DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI 133

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.5 bits (78), Expect = 8e-04
 Identities = 10/35 (28%), Positives = 18/35 (51%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
              +      +L G+ H+HS G+ H  +K  NI++
Sbjct: 118 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 152

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 32.8 bits (74), Expect = 0.003
 Identities = 6/35 (17%), Positives = 12/35 (34%)

Query: 21  EHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILL 55
                     IL  +   +  G+ H  +   N+L+
Sbjct: 102 VENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLV 136

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	97
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.87
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.86
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.85
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.85
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.85
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.84
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.84
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.83
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.83
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.82
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.82
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.82
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.81
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.81
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.81
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.81
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.81
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.81
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.81
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.8
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.8
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.8
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.8
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.79
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.79
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.79
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.79
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.79
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.79
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.79
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.79
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.78
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.78
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.78
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.78
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.78
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.77
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.77
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.76
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.75
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.74
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.74
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.73
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.73
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.73
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.72
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.72
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.72
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.71
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.71
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.71
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.71
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.71
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.71
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.7
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.7
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.69
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.69
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.68
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.62
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.59
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.39
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.37
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	95.41
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	94.35
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	94.13
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	91.23
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	89.98

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.6e-22  Score=120.61  Aligned_cols=89  Identities=20%  Similarity=0.291  Sum_probs=71.7

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||+|.+++... +.+++..+..++.|++.|+.|+|+++++|||+||+||++    +.+..+||+|||+|+........
T Consensus        85 ~~gg~L~~~l~~~-~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl----~~~~~~KL~DFG~a~~~~~~~~~  159 (271)
T d1nvra_          85 CSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRE  159 (271)
T ss_dssp             CTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----CTTCCEEECCCTTCEECEETTEE
T ss_pred             cCCCcHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEE----CCCCCEEEccchhheeeccCCcc
Confidence            4578999999765 459999999999999999999999999999999999999    66788999999999987654433


Q ss_pred             eeeccccCcccccc
Q 038072           83 NVTGVGEGQVADIS   96 (97)
Q Consensus        83 ~~~~~~~~~~~~~~   96 (97)
                      .......|++.||+
T Consensus       160 ~~~~~~~GT~~Y~A  173 (271)
T d1nvra_         160 RLLNKMCGTLPYVA  173 (271)
T ss_dssp             CCBCCCCSCGGGSC
T ss_pred             ccccceeeCcCccC
Confidence            22222234555554

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=4e-22  Score=119.14  Aligned_cols=90  Identities=19%  Similarity=0.255  Sum_probs=68.4

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||+|.+++...+..+++..+..++.|++.|+.|+|+++++|||+|++||++    +.+..+||+|||+|+........
T Consensus        85 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl----~~~~~~Kl~DFGla~~~~~~~~~  160 (276)
T d1uwha_          85 CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTVKIGDFGLATVKSRWSGS  160 (276)
T ss_dssp             CCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----ETTSSEEECCCCCSCC-------
T ss_pred             CCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEE----cCCCCEEEccccceeeccccCCc
Confidence            46799999998766679999999999999999999999999999999999999    66788999999999876654333


Q ss_pred             eeeccccCcccccc
Q 038072           83 NVTGVGEGQVADIS   96 (97)
Q Consensus        83 ~~~~~~~~~~~~~~   96 (97)
                      .......+++.||+
T Consensus       161 ~~~~~~~gt~~y~A  174 (276)
T d1uwha_         161 HQFEQLSGSILWMA  174 (276)
T ss_dssp             -----CCCCGGGCC
T ss_pred             ccccccccCcccCC
Confidence            22223344555654

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.3e-21  Score=117.77  Aligned_cols=83  Identities=25%  Similarity=0.237  Sum_probs=70.7

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||+|.+++.+  +.+++..+..++.|++.|+.|+|+++++|||+||+||++    +.+..+||+|||+|+........
T Consensus        99 ~~gg~L~~~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl----~~~~~vkl~DFG~a~~~~~~~~~  172 (293)
T d1yhwa1          99 LAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL----GMDGSVKLTDFGFCAQITPEQSK  172 (293)
T ss_dssp             CTTCBHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTCCEEECCCTTCEECCSTTCC
T ss_pred             cCCCcHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEE----CCCCcEeeccchhheeecccccc
Confidence            568999998876  459999999999999999999999999999999999999    66788999999999987665544


Q ss_pred             eeeccccCc
Q 038072           83 NVTGVGEGQ   91 (97)
Q Consensus        83 ~~~~~~~~~   91 (97)
                      ....+||+.
T Consensus       173 ~~~~~gt~~  181 (293)
T d1yhwa1         173 RSTMVGTPY  181 (293)
T ss_dssp             BCCCCSCGG
T ss_pred             ccccccCCC
Confidence            445555543

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.1e-21  Score=118.76  Aligned_cols=85  Identities=26%  Similarity=0.320  Sum_probs=73.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||+|.+++.+. +.+++..++.++.|++.|+.|+|+++++|||+||+||++    +.+..+||+|||+|+........
T Consensus        87 ~~gg~L~~~~~~~-~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl----~~~g~vkl~DFG~a~~~~~~~~~  161 (337)
T d1o6la_          87 ANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML----DKDGHIKITDFGLCKEGISDGAT  161 (337)
T ss_dssp             CTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTSCEEECCCTTCBCSCCTTCC
T ss_pred             cCCCchhhhhhcc-cCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEe----cCCCCEEEeecccccccccCCcc
Confidence            5689999999886 559999999999999999999999999999999999999    77789999999999977665555


Q ss_pred             eeeccccCcc
Q 038072           83 NVTGVGEGQV   92 (97)
Q Consensus        83 ~~~~~~~~~~   92 (97)
                      ..+.+||+.|
T Consensus       162 ~~~~~GT~~Y  171 (337)
T d1o6la_         162 MKTFCGTPEY  171 (337)
T ss_dssp             BCCCEECGGG
T ss_pred             cccceeCHHH
Confidence            5556665544

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.5e-21  Score=116.26  Aligned_cols=89  Identities=21%  Similarity=0.263  Sum_probs=68.7

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||+|.+++... +.+++..+..++.|++.|+.|+|+++++|||+||+||++    +.+..++|+|||+|+........
T Consensus        90 ~~gg~L~~~~~~~-~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll----~~~~~vkl~DFG~a~~~~~~~~~  164 (288)
T d1uu3a_          90 AKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQ  164 (288)
T ss_dssp             CTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTSCEEECCCTTCEECC-----
T ss_pred             cCCCCHHHhhhcc-CCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCcccccc----CCCceEEecccccceecccCCcc
Confidence            3578999998876 559999999999999999999999999999999999999    77788999999999987654433


Q ss_pred             eeeccccCcccccc
Q 038072           83 NVTGVGEGQVADIS   96 (97)
Q Consensus        83 ~~~~~~~~~~~~~~   96 (97)
                      .......|++.||+
T Consensus       165 ~~~~~~~GT~~Y~A  178 (288)
T d1uu3a_         165 ARANSFVGTAQYVS  178 (288)
T ss_dssp             -----CCCCGGGCC
T ss_pred             cccccccCCccccC
Confidence            32222234555554

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=4e-21  Score=115.59  Aligned_cols=90  Identities=16%  Similarity=0.101  Sum_probs=66.6

Q ss_pred             CCCCCHHHHHhhcc---------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEE
Q 038072            3 SSGVNFYNHSKKSA---------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKI   67 (97)
Q Consensus         3 ~~g~~l~~~l~~~~---------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i   67 (97)
                      +.||+|.+++....               ..+++..+..++.|++.|+.|+|+++++|||+||+||++    +.+..+||
T Consensus       100 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl----~~~~~~Kl  175 (299)
T d1ywna1         100 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL----SEKNVVKI  175 (299)
T ss_dssp             CTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CGGGCEEE
T ss_pred             cCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeE----CCCCcEEE
Confidence            56899999987532               238899999999999999999999999999999999999    77889999


Q ss_pred             eecCceeeeccCCcceeeccccCcccccc
Q 038072           68 VARGDKCLHERHGLLNVTGVGEGQVADIS   96 (97)
Q Consensus        68 ~dfg~a~~~~~~~~~~~~~~~~~~~~~~~   96 (97)
                      +|||+|+...............+++.||+
T Consensus       176 ~DFGla~~~~~~~~~~~~~~~~gt~~y~A  204 (299)
T d1ywna1         176 CDFGLARDIYKDPDYVRKGDARLPLKWMA  204 (299)
T ss_dssp             CC------CCSCTTSCCTTSCCCGGGGCC
T ss_pred             ccCcchhhccccccccccCceeeCccccc
Confidence            99999987665444433333345566664

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.7e-21  Score=116.98  Aligned_cols=84  Identities=18%  Similarity=0.172  Sum_probs=69.9

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||+|.+++.+..+.+++..+..++.|++.|+.|+|+++++|||+||+||++    +.+..+||+|||+|+........
T Consensus        91 ~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll----~~~~~~Kl~DFG~a~~~~~~~~~  166 (288)
T d2jfla1          91 CAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILF----TLDGDIKLADFGVSAKNTRTIQR  166 (288)
T ss_dssp             CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECHHHHHH
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeE----CCCCCEEEEechhhhccCCCccc
Confidence            46899999987765669999999999999999999999999999999999999    77788999999999876654333


Q ss_pred             eeeccccC
Q 038072           83 NVTGVGEG   90 (97)
Q Consensus        83 ~~~~~~~~   90 (97)
                      ..+.+|++
T Consensus       167 ~~~~~Gt~  174 (288)
T d2jfla1         167 RDSFIGTP  174 (288)
T ss_dssp             HTCCCSCC
T ss_pred             cccccccc
Confidence            33344443

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=9.7e-21  Score=112.43  Aligned_cols=71  Identities=24%  Similarity=0.231  Sum_probs=64.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.||+|.+++.+. +.+++..+..++.|++.|+.|+|+++++|||+||+||++    +.+..+||+|||+|+....
T Consensus        88 ~~~g~L~~~l~~~-~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill----~~~~~~kl~DFG~a~~~~~  158 (263)
T d2j4za1          88 APLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL----GSAGELKIADFGWSVHAPS  158 (263)
T ss_dssp             CTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEECCCCSCSCCCC
T ss_pred             cCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeecccccee----cCCCCEeecccceeeecCC
Confidence            4689999999876 459999999999999999999999999999999999999    7778899999999976554

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=8.5e-21  Score=115.45  Aligned_cols=90  Identities=14%  Similarity=0.161  Sum_probs=71.5

Q ss_pred             CCCCCHHHHHhhcc----------------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCC
Q 038072            3 SSGVNFYNHSKKSA----------------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKD   60 (97)
Q Consensus         3 ~~g~~l~~~l~~~~----------------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~   60 (97)
                      +.||+|.+++....                      ..+++..+..++.|++.|+.|+|+++++|||+||+||++    +
T Consensus       123 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill----~  198 (325)
T d1rjba_         123 CCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV----T  198 (325)
T ss_dssp             CTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEE----E
T ss_pred             CCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhcccc----c
Confidence            46899999997643                      237899999999999999999999999999999999999    6


Q ss_pred             CCceEEEeecCceeeeccCCcceeeccccCcccccc
Q 038072           61 AGFMAKIVARGDKCLHERHGLLNVTGVGEGQVADIS   96 (97)
Q Consensus        61 ~~~~~~i~dfg~a~~~~~~~~~~~~~~~~~~~~~~~   96 (97)
                      .+..+||+|||+|+...............+++.||+
T Consensus       199 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~a  234 (325)
T d1rjba_         199 HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMA  234 (325)
T ss_dssp             TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCC
T ss_pred             cCCeEEEeeccccccccCCCceeeeccccCCCccCC
Confidence            778999999999987766544433333334555654

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.82  E-value=2.3e-20  Score=114.61  Aligned_cols=89  Identities=19%  Similarity=0.304  Sum_probs=70.8

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||+|.+++....+.+++..+..++.|++.|+.|+|+++++|||+||+||++..  ..+..+||+|||+++........
T Consensus       105 ~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~--~~~~~vkL~DFG~a~~~~~~~~~  182 (350)
T d1koaa2         105 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT--KRSNELKLIDFGLTAHLDPKQSV  182 (350)
T ss_dssp             CCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS--TTSCCEEECCCTTCEECCTTSCE
T ss_pred             CCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeecc--CCCCeEEEeecchheeccccccc
Confidence            4689999999765566999999999999999999999999999999999999942  23467999999999887654332


Q ss_pred             eeeccccCcccccc
Q 038072           83 NVTGVGEGQVADIS   96 (97)
Q Consensus        83 ~~~~~~~~~~~~~~   96 (97)
                       .+..||  ..||+
T Consensus       183 -~~~~gT--~~Y~a  193 (350)
T d1koaa2         183 -KVTTGT--AEFAA  193 (350)
T ss_dssp             -EEECSC--TTTCC
T ss_pred             -ceecCc--ccccC
Confidence             334444  44543

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.82  E-value=3.8e-20  Score=113.72  Aligned_cols=85  Identities=24%  Similarity=0.334  Sum_probs=69.5

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||+|.+++......+++..+..++.|++.|+.|+|+++++|||+||+||++..  .....+||+|||+|+........
T Consensus       108 ~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~--~~~~~vkL~DFGla~~~~~~~~~  185 (352)
T d1koba_         108 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET--KKASSVKIIDFGLATKLNPDEIV  185 (352)
T ss_dssp             CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS--TTCCCEEECCCTTCEECCTTSCE
T ss_pred             CCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccc--cCCCeEEEeecccceecCCCCce
Confidence            5689999988776566999999999999999999999999999999999999942  24568999999999987764332


Q ss_pred             eeeccccC
Q 038072           83 NVTGVGEG   90 (97)
Q Consensus        83 ~~~~~~~~   90 (97)
                       .+..|++
T Consensus       186 -~~~~gt~  192 (352)
T d1koba_         186 -KVTTATA  192 (352)
T ss_dssp             -EEECSSG
T ss_pred             -eeccCcc
Confidence             3334443

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.2e-20  Score=114.49  Aligned_cols=91  Identities=11%  Similarity=0.073  Sum_probs=72.1

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCc
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGL   81 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~   81 (97)
                      .+.+++|.+.+......+++..+..++.|++.|+.|+|+++++|||+|++||++    +.+..+||+|||+++.......
T Consensus        91 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll----~~~~~~kl~DFGla~~~~~~~~  166 (317)
T d1xkka_          91 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEK  166 (317)
T ss_dssp             CCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----EETTEEEECCCSHHHHTTTTCC
T ss_pred             eccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhccee----CCCCCeEeeccccceecccccc
Confidence            467899999888776779999999999999999999999999999999999999    6677899999999987665444


Q ss_pred             ceeeccccCcccccc
Q 038072           82 LNVTGVGEGQVADIS   96 (97)
Q Consensus        82 ~~~~~~~~~~~~~~~   96 (97)
                      ...+..+.+++.||+
T Consensus       167 ~~~~~~~~gt~~y~A  181 (317)
T d1xkka_         167 EYHAEGGKVPIKWMA  181 (317)
T ss_dssp             --------CCTTTSC
T ss_pred             cccccccccCccccC
Confidence            444444455666664

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=3.6e-20  Score=111.01  Aligned_cols=90  Identities=13%  Similarity=0.095  Sum_probs=72.7

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||+|.+++...+..+++..+..++.|++.|+.|+|+++++|||+|++||++    +.+..+||+|||+++........
T Consensus        90 ~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill----~~~~~~Kl~DFGla~~~~~~~~~  165 (285)
T d1u59a_          90 AGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL----VNRHYAKISDFGLSKALGADDSY  165 (285)
T ss_dssp             CTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----EETTEEEECCCTTCEECTTCSCE
T ss_pred             CCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheee----ccCCceeeccchhhhcccccccc
Confidence            35789999987765679999999999999999999999999999999999999    55778999999999987654333


Q ss_pred             e-eeccccCcccccc
Q 038072           83 N-VTGVGEGQVADIS   96 (97)
Q Consensus        83 ~-~~~~~~~~~~~~~   96 (97)
                      . ....+.+++.||+
T Consensus       166 ~~~~~~~~gt~~y~a  180 (285)
T d1u59a_         166 YTARSAGKWPLKWYA  180 (285)
T ss_dssp             ECCCCSSCCCGGGCC
T ss_pred             cccccccccCccccC
Confidence            2 2223345556654

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.81  E-value=6.7e-20  Score=113.00  Aligned_cols=72  Identities=28%  Similarity=0.418  Sum_probs=65.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.||+|.+++.+. ..+++..+..++.|++.|+.|+|+++++|||+||+||++    +....+||+|||+|+.....
T Consensus        89 ~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl----~~~g~iKl~DFGla~~~~~~  160 (364)
T d1omwa3          89 MNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL----DEHGHVRISDLGLACDFSKK  160 (364)
T ss_dssp             CCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CSSSCEEECCCTTCEECSSS
T ss_pred             cCCCcHHHHHHhc-ccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEE----cCCCcEEEeeeceeeecCCC
Confidence            4589999999876 559999999999999999999999999999999999999    77788999999999876653

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=9.9e-21  Score=115.03  Aligned_cols=71  Identities=20%  Similarity=0.231  Sum_probs=63.7

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~-~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.||+|.+++.+. +.+++..+..++.|++.|+.|+|+ ++++|||+||+||++    ..+..+||+|||+|+....
T Consensus        86 ~~gg~L~~~l~~~-~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl----~~~~~vkl~DFGla~~~~~  157 (322)
T d1s9ja_          86 MDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV----NSRGEIKLCDFGVSGQLID  157 (322)
T ss_dssp             CTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEE----CTTCCEEECCCCCCHHHHH
T ss_pred             CCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeE----CCCCCEEEeeCCCccccCC
Confidence            5689999999876 459999999999999999999997 599999999999999    7778899999999986554

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=3.9e-20  Score=112.97  Aligned_cols=86  Identities=19%  Similarity=0.239  Sum_probs=68.8

Q ss_pred             CCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCc
Q 038072            3 SSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGL   81 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~   81 (97)
                      +.||+|.+++.... ..+++.++..++.|++.|+.|+|+++++|||+||+||++... .....+||+|||+|+.......
T Consensus        91 ~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~-~~~~~~Kl~DFG~a~~~~~~~~  169 (335)
T d2ozaa1          91 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNS  169 (335)
T ss_dssp             CCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCS-STTCCEEECCCTTCEECCCCCC
T ss_pred             CCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccc-cccccccccccceeeeccCCCc
Confidence            45899999998653 459999999999999999999999999999999999999532 2356799999999987665433


Q ss_pred             ceeeccccC
Q 038072           82 LNVTGVGEG   90 (97)
Q Consensus        82 ~~~~~~~~~   90 (97)
                      . .+.+|++
T Consensus       170 ~-~~~~gt~  177 (335)
T d2ozaa1         170 L-TTPCYTP  177 (335)
T ss_dssp             C-CCCSCCC
T ss_pred             c-ccccCCc
Confidence            2 3334443

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.81  E-value=9.3e-20  Score=108.84  Aligned_cols=73  Identities=23%  Similarity=0.341  Sum_probs=66.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      +.||+|.+++... +.+++..+..++.|++.|+.|+|+++++|+|+||+||++    +.+..+||+|||+++......
T Consensus        92 ~~~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill----~~~~~~kl~DFG~a~~~~~~~  164 (277)
T d1phka_          92 MKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL----DDDMNIKLTDFGFSCQLDPGE  164 (277)
T ss_dssp             CTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCCTTCEECCTTC
T ss_pred             CCCchHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEE----cCCCCeEEccchheeEccCCC
Confidence            3578999999876 569999999999999999999999999999999999999    778899999999999876533

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=4.3e-20  Score=111.28  Aligned_cols=72  Identities=14%  Similarity=0.184  Sum_probs=59.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.||+|.+++....+.+++..+..++.|++.|+.|+|+++++|||+|++||++    +.+..+||+|||+++....
T Consensus       109 ~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl----~~~~~~Kl~DFGla~~~~~  180 (299)
T d1jpaa_         109 MENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV----NSNLVCKVSDFGLSRFLED  180 (299)
T ss_dssp             CTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTCCEEECCC--------
T ss_pred             cCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEE----CCCCcEEECCcccceEccC
Confidence            45789999988866679999999999999999999999999999999999999    7788999999999987654

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.81  E-value=5.3e-20  Score=111.28  Aligned_cols=86  Identities=19%  Similarity=0.262  Sum_probs=59.0

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||+|.+++... +.+++..+..++.|++.|+.|+|+++++|||+||+||++... ..+..+||+|||+|+....... 
T Consensus        89 ~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~-~~~~~vkl~DFG~a~~~~~~~~-  165 (307)
T d1a06a_          89 VSGGELFDRIVEK-GFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSL-DEDSKIMISDFGLSKMEDPGSV-  165 (307)
T ss_dssp             CCSCBHHHHHHTC-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSS-STTCCEEECCC------------
T ss_pred             cCCCcHHHhhhcc-cCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeeccc-CCCceEEEeccceeEEccCCCe-
Confidence            4589999999875 559999999999999999999999999999999999999432 3356799999999987654332 


Q ss_pred             eeeccccCc
Q 038072           83 NVTGVGEGQ   91 (97)
Q Consensus        83 ~~~~~~~~~   91 (97)
                      ..+.+||+.
T Consensus       166 ~~~~~GT~~  174 (307)
T d1a06a_         166 LSTACGTPG  174 (307)
T ss_dssp             -------CT
T ss_pred             eeeeeeCcc
Confidence            233445443

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=8.8e-20  Score=111.97  Aligned_cols=72  Identities=18%  Similarity=0.237  Sum_probs=65.2

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+.||+|.+++.+. +.+++..++.++.|++.|+.|+|+++++|||+||+||++    +.+..+||+|||+|+....
T Consensus       122 ~~~~g~l~~~l~~~-~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl----~~~g~ikL~DFG~a~~~~~  193 (350)
T d1rdqe_         122 YVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVTDFGFAKRVKG  193 (350)
T ss_dssp             CCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECSS
T ss_pred             cccccchhhhHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHccc----CCCCCEEeeeceeeeeccc
Confidence            35689999999876 459999999999999999999999999999999999999    6778899999999987654

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=9.6e-20  Score=108.44  Aligned_cols=86  Identities=22%  Similarity=0.310  Sum_probs=68.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC--ccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHG--VAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~--~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      +.||+|.+++.+. ..+++..+..++.|++.|+.|+|+++  ++|||+||+||++.   ..+..+||+|||+|+..... 
T Consensus        94 ~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~---~~~~~~Kl~DFGla~~~~~~-  168 (270)
T d1t4ha_          94 MTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT---GPTGSVKIGDLGLATLKRAS-  168 (270)
T ss_dssp             CCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES---STTSCEEECCTTGGGGCCTT-
T ss_pred             CCCCcHHHHHhcc-ccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceee---CCCCCEEEeecCcceeccCC-
Confidence            4689999999876 45999999999999999999999998  99999999999993   23568999999999754432 


Q ss_pred             cceeeccccCcccccc
Q 038072           81 LLNVTGVGEGQVADIS   96 (97)
Q Consensus        81 ~~~~~~~~~~~~~~~~   96 (97)
                       ...+.+||  +.||+
T Consensus       169 -~~~~~~GT--~~Y~a  181 (270)
T d1t4ha_         169 -FAKAVIGT--PEFMA  181 (270)
T ss_dssp             -SBEESCSS--CCCCC
T ss_pred             -ccCCcccC--ccccC
Confidence             22334454  44553

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=1.1e-19  Score=109.04  Aligned_cols=73  Identities=11%  Similarity=0.114  Sum_probs=64.6

Q ss_pred             CCCCCHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKS-AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~-~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.+|+|.+++... ...+++..+..++.|++.|+.|+|+++++|||+|++||++    +.+..+||+|||+|+.....
T Consensus        95 ~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl----~~~~~~Kl~DFG~a~~~~~~  168 (287)
T d1opja_          95 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV----GENHLVKVADFGLSRLMTGD  168 (287)
T ss_dssp             CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGCEEECCCCCTTTCCSS
T ss_pred             ccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEE----CCCCcEEEccccceeecCCC
Confidence            5679999998764 3458999999999999999999999999999999999999    77889999999999876543

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.2e-19  Score=108.40  Aligned_cols=89  Identities=12%  Similarity=0.090  Sum_probs=71.0

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||+|.+++... ..+++..+..++.|++.|+.|+|+++++|||+|++||++    +.+..++++|||+++........
T Consensus        89 ~~~g~L~~~l~~~-~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill----~~~~~~kl~DFGla~~~~~~~~~  163 (277)
T d1xbba_          89 AELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL----VTQHYAKISDFGLSKALRADENY  163 (277)
T ss_dssp             CTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----EETTEEEECCCTTCEECCTTCSE
T ss_pred             CCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcc----cccCcccccchhhhhhccccccc
Confidence            4589999999876 459999999999999999999999999999999999999    66789999999999876654333


Q ss_pred             e-eeccccCcccccc
Q 038072           83 N-VTGVGEGQVADIS   96 (97)
Q Consensus        83 ~-~~~~~~~~~~~~~   96 (97)
                      . ......+++.||+
T Consensus       164 ~~~~~~~~gt~~y~A  178 (277)
T d1xbba_         164 YKAQTHGKWPVKWYA  178 (277)
T ss_dssp             EEC----CCCGGGCC
T ss_pred             cccccccCCCceecC
Confidence            2 2223345556664

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=3.4e-20  Score=110.37  Aligned_cols=85  Identities=21%  Similarity=0.177  Sum_probs=59.5

Q ss_pred             CCCCCHHHHHhhc---ccccCHHHHHHHHHHHHHHHHHHHHcC-----ccccCCCCCcEEEeeCCCCCceEEEeecCcee
Q 038072            3 SSGVNFYNHSKKS---AKILLEHEVRRYTRDILRGLDHIHSHG-----VAHCGIKLDNILLVPGKDAGFMAKIVARGDKC   74 (97)
Q Consensus         3 ~~g~~l~~~l~~~---~~~l~~~~~~~~~~~i~~~l~~~h~~~-----~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~   74 (97)
                      +.||+|.+++.+.   +..+++..+..++.|++.|+.|+|+++     ++|||+||+||++    +.+..+||+|||+|+
T Consensus        87 ~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll----~~~~~vkl~DFG~a~  162 (269)
T d2java1          87 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL----DGKQNVKLGDFGLAR  162 (269)
T ss_dssp             CTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEE----CTTSCEEECCHHHHH
T ss_pred             CCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCc----CCCCcEEEeecccee
Confidence            4589999998652   345999999999999999999999976     9999999999999    777889999999998


Q ss_pred             eeccCCcceeeccccCc
Q 038072           75 LHERHGLLNVTGVGEGQ   91 (97)
Q Consensus        75 ~~~~~~~~~~~~~~~~~   91 (97)
                      ..........+..||+.
T Consensus       163 ~~~~~~~~~~~~~gt~~  179 (269)
T d2java1         163 ILNHDTSFAKAFVGTPY  179 (269)
T ss_dssp             HC-----------CCCS
T ss_pred             ecccCCCccccCCCCcc
Confidence            87655444445555544

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.79  E-value=1.2e-19  Score=109.74  Aligned_cols=70  Identities=29%  Similarity=0.302  Sum_probs=60.8

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .||+|..++... +.+++..+..++.|++.|+.|+|+++++|||+||+||++    +.+..+||+|||+|.....
T Consensus        98 ~~g~l~~~~~~~-~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl----~~~~~~Kl~DFG~a~~~~~  167 (309)
T d1u5ra_          98 LGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL----SEPGLVKLGDFGSASIMAP  167 (309)
T ss_dssp             SEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEE----ETTTEEEECCCTTCBSSSS
T ss_pred             CCCchHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEE----CCCCCEEEeecccccccCC
Confidence            466676665554 569999999999999999999999999999999999999    6678999999999986554

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.7e-19  Score=106.95  Aligned_cols=74  Identities=11%  Similarity=0.091  Sum_probs=60.2

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      +.+|+|.+++......+++..+..++.|++.|+.|+|+++++|||+|++||++    +.+..+||+|||+++......
T Consensus        82 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill----~~~~~~Kl~DFGla~~~~~~~  155 (263)
T d1sm2a_          82 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV----GENQVIKVSDFGMTRFVLDDQ  155 (263)
T ss_dssp             CTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEE----CGGGCEEECSCC---------
T ss_pred             cCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheee----cCCCCeEecccchheeccCCC
Confidence            45899999988765668999999999999999999999999999999999999    778899999999998765533

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.8e-19  Score=110.28  Aligned_cols=73  Identities=29%  Similarity=0.370  Sum_probs=65.7

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      |++.|++|.+++..  +.+++..++.++.|++.|+.|+|+++++|||+||+||++    +....+||+|||++......
T Consensus        90 ~~~~~g~L~~~l~~--~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl----~~~~~~kl~DfG~a~~~~~~  162 (345)
T d1pmea_          90 THLMGADLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL----NTTCDLKICDFGLARVADPD  162 (345)
T ss_dssp             EECCCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEECCGG
T ss_pred             EeecCCchhhhhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEE----CCCCCEEEcccCceeeccCC
Confidence            35678999999976  459999999999999999999999999999999999999    77789999999999876543

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=3.4e-19  Score=108.24  Aligned_cols=86  Identities=27%  Similarity=0.254  Sum_probs=71.8

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.||+|.+++... ..+++..+..++.|++.|+.|+|+++++|||+|++||++    +....+|++|||+++........
T Consensus        85 ~~~g~L~~~i~~~-~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~----~~~~~~kl~DFG~a~~~~~~~~~  159 (320)
T d1xjda_          85 LNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL----DKDGHIKIADFGMCKENMLGDAK  159 (320)
T ss_dssp             CTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTSCEEECCCTTCBCCCCTTCC
T ss_pred             cCCCcHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceee----cCCCceeccccchhhhccccccc
Confidence            4689999999876 559999999999999999999999999999999999999    77889999999999876654444


Q ss_pred             eeeccccCccccc
Q 038072           83 NVTGVGEGQVADI   95 (97)
Q Consensus        83 ~~~~~~~~~~~~~   95 (97)
                      .....|+  +.|+
T Consensus       160 ~~~~~gt--~~y~  170 (320)
T d1xjda_         160 TNTFCGT--PDYI  170 (320)
T ss_dssp             BCCCCSC--GGGC
T ss_pred             ccccCCC--CCcC
Confidence            4444444  4454

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=3.3e-19  Score=108.29  Aligned_cols=76  Identities=25%  Similarity=0.387  Sum_probs=65.8

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      +.|++|.+++.+.+..+++.++..++.|++.|+.|+|+++++|||+||+||++..  .....++++|||+++......
T Consensus        83 ~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~--~~~~~ikl~DFG~~~~~~~~~  158 (321)
T d1tkia_          83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT--RRSSTIKIIEFGQARQLKPGD  158 (321)
T ss_dssp             CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS--SSCCCEEECCCTTCEECCTTC
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecC--CCceEEEEcccchhhccccCC
Confidence            4578999999877556999999999999999999999999999999999999942  245679999999998776543

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=2.8e-19  Score=106.91  Aligned_cols=90  Identities=13%  Similarity=0.115  Sum_probs=64.9

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.++++.+++......+++..+..++.|++.|+.|+|+++++|||+|++||++    +.+..+||+|||+++........
T Consensus        91 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl----~~~~~~Kl~DFGla~~~~~~~~~  166 (283)
T d1mqba_          91 MENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV----NSNLVCKVSDFGLSRVLEDDPEA  166 (283)
T ss_dssp             CTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTCCEEECCCCC----------
T ss_pred             cccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEE----CCCCeEEEcccchhhcccCCCcc
Confidence            45788888887766679999999999999999999999999999999999999    77889999999999876554332


Q ss_pred             eee-ccccCcccccc
Q 038072           83 NVT-GVGEGQVADIS   96 (97)
Q Consensus        83 ~~~-~~~~~~~~~~~   96 (97)
                      ..+ ....+++.||+
T Consensus       167 ~~~~~~~~gt~~Y~A  181 (283)
T d1mqba_         167 TYTTSGGKIPIRWTA  181 (283)
T ss_dssp             -------CCCGGGSC
T ss_pred             ceEeccCCCCccccC
Confidence            222 22234556664

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=5.7e-19  Score=105.96  Aligned_cols=77  Identities=23%  Similarity=0.322  Sum_probs=65.8

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      +.||+|.+++... +.+++..+..++.|++.|+.|+|+++++|||+|++||++.........+|++|||++.......
T Consensus        95 ~~gg~L~~~i~~~-~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~  171 (293)
T d1jksa_          95 VAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN  171 (293)
T ss_dssp             CCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSC
T ss_pred             CCCccccchhccc-cccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCCc
Confidence            4689999999876 4599999999999999999999999999999999999995432334469999999998876543

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=2.3e-19  Score=106.76  Aligned_cols=89  Identities=16%  Similarity=0.137  Sum_probs=70.6

Q ss_pred             CCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCc
Q 038072            3 SSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGL   81 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~   81 (97)
                      +.+|+|.+++.... ..+++..+..++.|++.|+.|+|+++++|||+|++||++    +.+..+||+|||+|+.......
T Consensus        89 ~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll----~~~~~~Kl~DFGla~~~~~~~~  164 (272)
T d1qpca_          89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV----SDTLSCKIADFGLARLIEDNEY  164 (272)
T ss_dssp             CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTSCEEECCCTTCEECSSSCE
T ss_pred             CCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheee----ecccceeeccccceEEccCCcc
Confidence            46899999776542 348999999999999999999999999999999999999    7788999999999998765332


Q ss_pred             ceeeccccCcccccc
Q 038072           82 LNVTGVGEGQVADIS   96 (97)
Q Consensus        82 ~~~~~~~~~~~~~~~   96 (97)
                      .. .....++..||+
T Consensus       165 ~~-~~~~~gt~~y~A  178 (272)
T d1qpca_         165 TA-REGAKFPIKWTA  178 (272)
T ss_dssp             EC-CTTCCCCTTTSC
T ss_pred             cc-ccccCCcccccC
Confidence            22 222344555654

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=9.4e-20  Score=109.56  Aligned_cols=87  Identities=20%  Similarity=0.193  Sum_probs=68.7

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      |+...+++...+...+..+++..+..++.|++.|+.|+|+++++|||+||+||++    +....+||+|||+|+......
T Consensus        79 mE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli----~~~~~~KL~DFG~a~~~~~~~  154 (299)
T d1ua2a_          79 FDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL----DENGVLKLADFGLAKSFGSPN  154 (299)
T ss_dssp             EECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTCCEEECCCGGGSTTTSCC
T ss_pred             hhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEe----cCCCccccccCccccccCCCc
Confidence            3445555555555544669999999999999999999999999999999999999    778899999999998766554


Q ss_pred             cceeeccccCc
Q 038072           81 LLNVTGVGEGQ   91 (97)
Q Consensus        81 ~~~~~~~~~~~   91 (97)
                      ....+.+||+.
T Consensus       155 ~~~~~~~gt~~  165 (299)
T d1ua2a_         155 RAYTHQVVTRW  165 (299)
T ss_dssp             CCCCCSCCCCT
T ss_pred             ccccceecChh
Confidence            44444455443

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.78  E-value=4.4e-19  Score=106.53  Aligned_cols=78  Identities=19%  Similarity=0.204  Sum_probs=66.9

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      |+..|+++.+.+....+.+++..+..++.|++.|+.|+|+++++|||+||+||++... +....++++|||+|+.....
T Consensus        82 me~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~-~~~~~vkl~DFG~a~~~~~~  159 (299)
T d1ckia_          82 MELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG-KKGNLVYIIDFGLAKKYRDA  159 (299)
T ss_dssp             EECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCG-GGTTCEEECCCSSCEECBCT
T ss_pred             EEEcCCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhcccccc-CCCceeeeeccCcceecccc
Confidence            5677899988887766779999999999999999999999999999999999998432 33557999999999987643

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.78  E-value=5.7e-19  Score=107.07  Aligned_cols=71  Identities=23%  Similarity=0.260  Sum_probs=64.0

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.||+|.+++... ..+++..++.++.|++.|+.|+|+++++|||+||+||++    +.+..+||+|||+|+....
T Consensus        86 ~~gg~l~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl----~~~g~vkL~DFG~a~~~~~  156 (316)
T d1fota_          86 IEGGELFSLLRKS-QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL----DKNGHIKITDFGFAKYVPD  156 (316)
T ss_dssp             CCSCBHHHHHHHT-SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE----CTTSCEEECCCSSCEECSS
T ss_pred             cCCcccccccccc-ccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeE----cCCCCEEEecCccceEecc
Confidence            4688999988876 458999999999999999999999999999999999999    7788999999999987654

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=2.7e-19  Score=106.44  Aligned_cols=89  Identities=13%  Similarity=0.070  Sum_probs=61.4

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.+|+|.+++......+++..+..++.|++.|+.|+|+++++|||+|++||++    +....+||+|||+|+........
T Consensus        89 ~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll----~~~~~~Kl~DfG~a~~~~~~~~~  164 (273)
T d1mp8a_          89 CTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV----SSNDCVKLGDFGLSRYMEDSTYY  164 (273)
T ss_dssp             CTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----EETTEEEECC-------------
T ss_pred             ccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheee----cCCCcEEEccchhheeccCCcce
Confidence            46789999887766679999999999999999999999999999999999999    56778999999999876543332


Q ss_pred             eeeccccCcccccc
Q 038072           83 NVTGVGEGQVADIS   96 (97)
Q Consensus        83 ~~~~~~~~~~~~~~   96 (97)
                      . +..+.+++.|++
T Consensus       165 ~-~~~~~gt~~y~a  177 (273)
T d1mp8a_         165 K-ASKGKLPIKWMA  177 (273)
T ss_dssp             -------CCGGGCC
T ss_pred             e-ccceecCcccch
Confidence            2 223444555654

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.77  E-value=9.8e-19  Score=104.95  Aligned_cols=78  Identities=17%  Similarity=0.155  Sum_probs=67.2

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCC-CCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGK-DAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~-~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+..|++|.+++......+++..+..++.|++.++.++|+++++|||+||+||++.... .....++++|||+|+....
T Consensus        80 me~~~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~  158 (293)
T d1csna_          80 IDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD  158 (293)
T ss_dssp             EECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred             EEecCCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEccc
Confidence            56779999999987766799999999999999999999999999999999999995321 2356799999999998654

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=3.2e-19  Score=107.22  Aligned_cols=87  Identities=18%  Similarity=0.104  Sum_probs=69.5

Q ss_pred             CCCCCCCHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            1 MASSGVNFYNHSKKS-AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         1 m~~~g~~l~~~l~~~-~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      |+..++++.+++... ...+++..+..++.|++.|+.|+|+++++|||+||+||++    +.+..+|++|||+|+.....
T Consensus        80 ~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~----~~~~~~kl~DFG~a~~~~~~  155 (298)
T d1gz8a_          80 FEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAIKLADFGLARAFGVP  155 (298)
T ss_dssp             EECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTSCEEECSTTHHHHHCCC
T ss_pred             EeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheee----cccCcceeccCCcceeccCC
Confidence            456667777766543 4559999999999999999999999999999999999999    77788999999999876654


Q ss_pred             CcceeeccccCc
Q 038072           80 GLLNVTGVGEGQ   91 (97)
Q Consensus        80 ~~~~~~~~~~~~   91 (97)
                      ........|++.
T Consensus       156 ~~~~~~~~gt~~  167 (298)
T d1gz8a_         156 VRTYTHEVVTLW  167 (298)
T ss_dssp             SBCTTCCBCCCT
T ss_pred             cccceeecccce
Confidence            444444444433

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=2.5e-18  Score=102.28  Aligned_cols=70  Identities=24%  Similarity=0.316  Sum_probs=61.0

Q ss_pred             CCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            5 GVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         5 g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      ++++.+++... +.+++..+..++.|++.|+.|+|+++++|||+||+||++.   .+...+||+|||+|+....
T Consensus        94 ~~~l~~~~~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~---~~~~~vkl~DFG~a~~~~~  163 (273)
T d1xwsa_          94 VQDLFDFITER-GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID---LNRGELKLIDFGSGALLKD  163 (273)
T ss_dssp             EEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---TTTTEEEECCCTTCEECCS
T ss_pred             cchHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEe---cCCCeEEECccccceeccc
Confidence            46888888776 5599999999999999999999999999999999999993   2356899999999987544

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=4.4e-18  Score=102.35  Aligned_cols=90  Identities=17%  Similarity=0.138  Sum_probs=72.9

Q ss_pred             CCCCCHHHHHhhcc---------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEE
Q 038072            3 SSGVNFYNHSKKSA---------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKI   67 (97)
Q Consensus         3 ~~g~~l~~~l~~~~---------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i   67 (97)
                      +.+|+|.+++....               ..+++..+..++.|++.|+.|+|+++++|||+|++||++    +.+..+||
T Consensus       101 ~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl----~~~~~~kl  176 (299)
T d1fgka_         101 ASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV----TEDNVMKI  176 (299)
T ss_dssp             CTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CTTCCEEE
T ss_pred             cCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceee----cCCCCeEe
Confidence            45899999997542               348999999999999999999999999999999999999    77889999


Q ss_pred             eecCceeeeccCCcceeeccccCcccccc
Q 038072           68 VARGDKCLHERHGLLNVTGVGEGQVADIS   96 (97)
Q Consensus        68 ~dfg~a~~~~~~~~~~~~~~~~~~~~~~~   96 (97)
                      +|||+++...............+++.|++
T Consensus       177 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~a  205 (299)
T d1fgka_         177 ADFGLARDIHHIDYYKKTTNGRLPVKWMA  205 (299)
T ss_dssp             CSTTCCCCGGGCCTTCCCTTSCCGGGGSC
T ss_pred             ccchhhccccccccccccccCCCChhhhh
Confidence            99999988766554443333444555654

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.74  E-value=9.9e-19  Score=104.45  Aligned_cols=84  Identities=14%  Similarity=0.067  Sum_probs=63.6

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCc
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGL   81 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~   81 (97)
                      +..++.+.+.+....+.+++..+..++.|++.|+.|+|+++++|||+||+||++    ..+..+|++|||.+........
T Consensus        80 e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll----~~~~~~kl~DfG~a~~~~~~~~  155 (286)
T d1ob3a_          80 EHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI----NREGELKIADFGLARAFGIPVR  155 (286)
T ss_dssp             ECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTSCEEECCTTHHHHHCC---
T ss_pred             EeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeE----cCCCCEEecccccceecccCcc
Confidence            345566666665555779999999999999999999999999999999999999    7788999999999987655443


Q ss_pred             ceeecccc
Q 038072           82 LNVTGVGE   89 (97)
Q Consensus        82 ~~~~~~~~   89 (97)
                      ......++
T Consensus       156 ~~~~~~~~  163 (286)
T d1ob3a_         156 KYTHEIVT  163 (286)
T ss_dssp             ------CC
T ss_pred             ccceeccc
Confidence            33333333

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=4.4e-18  Score=104.20  Aligned_cols=76  Identities=26%  Similarity=0.341  Sum_probs=61.6

Q ss_pred             CCCCCCCHHHHHhh---cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCC-CceEEEeecCceeee
Q 038072            1 MASSGVNFYNHSKK---SAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDA-GFMAKIVARGDKCLH   76 (97)
Q Consensus         1 m~~~g~~l~~~l~~---~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~-~~~~~i~dfg~a~~~   76 (97)
                      |+..++++.+.+..   ....+++..++.++.|++.|+.|+|+++++|||+|++||++    .. ...+||+|||+++..
T Consensus        98 ~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl----~~~~~~~kl~DFG~a~~~  173 (350)
T d1q5ka_          98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL----DPDTAVLKLCDFGSAKQL  173 (350)
T ss_dssp             EECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE----CTTTCCEEECCCTTCEEC
T ss_pred             EeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEE----ecCCCceeEecccchhhc
Confidence            45556666555432   33559999999999999999999999999999999999999    54 458999999999876


Q ss_pred             ccCC
Q 038072           77 ERHG   80 (97)
Q Consensus        77 ~~~~   80 (97)
                      ....
T Consensus       174 ~~~~  177 (350)
T d1q5ka_         174 VRGE  177 (350)
T ss_dssp             CTTS
T ss_pred             cCCc
Confidence            6543

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=6.6e-18  Score=100.54  Aligned_cols=74  Identities=18%  Similarity=0.202  Sum_probs=65.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      +.++++.+.+....+.+++..+..++.|++.|+.|+|+++++|||+|++||++    +.+..+|++|||+++......
T Consensus        92 ~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll----~~~~~vkl~DfGl~~~~~~~~  165 (273)
T d1u46a_          92 APLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL----ATRDLVKIGDFGLMRALPQND  165 (273)
T ss_dssp             CTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----EETTEEEECCCTTCEECCC-C
T ss_pred             ecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhcc----ccccceeeccchhhhhcccCC
Confidence            56789999887766679999999999999999999999999999999999999    557789999999999765543

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=5.1e-18  Score=101.60  Aligned_cols=89  Identities=16%  Similarity=0.138  Sum_probs=64.4

Q ss_pred             CCCCCHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCc
Q 038072            3 SSGVNFYNHSKKS-AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGL   81 (97)
Q Consensus         3 ~~g~~l~~~l~~~-~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~   81 (97)
                      +.+|+|..++... ...+++.++..++.+++.|+.|+|+.+++|+|+|++||++    +.+..+||+|||+++.......
T Consensus        93 ~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll----~~~~~~kl~DfGla~~~~~~~~  168 (285)
T d1fmka3          93 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV----GENLVCKVADFGLARLIEDNEY  168 (285)
T ss_dssp             CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGCEEECCCCTTC-------
T ss_pred             cCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEE----CCCCcEEEcccchhhhccCCCc
Confidence            5678888887653 3459999999999999999999999999999999999999    7778999999999987654332


Q ss_pred             ceeeccccCcccccc
Q 038072           82 LNVTGVGEGQVADIS   96 (97)
Q Consensus        82 ~~~~~~~~~~~~~~~   96 (97)
                      ... ....+++.|++
T Consensus       169 ~~~-~~~~gt~~y~a  182 (285)
T d1fmka3         169 TAR-QGAKFPIKWTA  182 (285)
T ss_dssp             --------CCGGGSC
T ss_pred             eee-ccccccccccC
Confidence            221 12334455553

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.73  E-value=5.6e-18  Score=101.93  Aligned_cols=73  Identities=14%  Similarity=0.083  Sum_probs=62.3

Q ss_pred             CCCCCHHHHHhhcc-----------------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCC
Q 038072            3 SSGVNFYNHSKKSA-----------------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGK   59 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-----------------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~   59 (97)
                      +.+|+|.+++....                       ..+++..+..++.|++.|+.|+|+++++|||+|++||++    
T Consensus        98 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILl----  173 (301)
T d1lufa_          98 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV----  173 (301)
T ss_dssp             CTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----
T ss_pred             cCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEE----
Confidence            35788998886421                       237899999999999999999999999999999999999    


Q ss_pred             CCCceEEEeecCceeeeccC
Q 038072           60 DAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus        60 ~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.+..+||+|||+++.....
T Consensus       174 d~~~~~Kl~DFGls~~~~~~  193 (301)
T d1lufa_         174 GENMVVKIADFGLSRNIYSA  193 (301)
T ss_dssp             CGGGCEEECCCSCHHHHTGG
T ss_pred             CCCCcEEEccchhheeccCC
Confidence            77889999999999865443

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.1e-17  Score=100.58  Aligned_cols=73  Identities=23%  Similarity=0.284  Sum_probs=59.7

Q ss_pred             CCCCCHHH-HHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYN-HSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~-~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      ...+.+.+ ........+++..++.++.|++.|+.|+|+++++|||+||+||++    .....+|++|||++......
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi----~~~~~~kl~dfg~~~~~~~~  169 (305)
T d1blxa_          96 HVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV----TSSGQIKLADFGLARIYSFQ  169 (305)
T ss_dssp             CCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTCCEEECSCCSCCCCCGG
T ss_pred             eccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEE----cCCCCeeecchhhhhhhccc
Confidence            33444444 333444559999999999999999999999999999999999999    77789999999999865543

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.72  E-value=7.1e-18  Score=100.39  Aligned_cols=71  Identities=18%  Similarity=0.233  Sum_probs=62.9

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++... +.+++.++..++.|++.|+.|+|+++++|||+||+||++    ......++.|||.+.....
T Consensus        93 ~~g~~L~~~~~~~-~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll----~~~~~~~l~d~~~~~~~~~  163 (277)
T d1o6ya_          93 VDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI----SATNAVKVMDFGIARAIAD  163 (277)
T ss_dssp             CCEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----ETTSCEEECCCTTCEECC-
T ss_pred             CCCCEehhhhccc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCccccc----Cccccceeehhhhhhhhcc
Confidence            3578999988776 559999999999999999999999999999999999999    6678899999999876543

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=2.3e-17  Score=100.16  Aligned_cols=71  Identities=30%  Similarity=0.428  Sum_probs=64.3

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.|++|.+++... +.+++..+..++.|++.|+.|+|+.+++|||+||+||++    +.+..++|+|||+++....
T Consensus       111 ~~~~~L~~~i~~~-~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill----~~~~~vkL~DFG~a~~~~~  181 (322)
T d1vzoa_         111 INGGELFTHLSQR-ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL----DSNGHVVLTDFGLSKEFVA  181 (322)
T ss_dssp             CCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEESCSSEEEECCG
T ss_pred             ccccHHHHHHHhc-ccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceee----cCCCCEEEeeccchhhhcc
Confidence            4689999999887 448899999999999999999999999999999999999    7778999999999987654

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=2.5e-17  Score=97.35  Aligned_cols=73  Identities=11%  Similarity=0.117  Sum_probs=65.0

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCC
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHG   80 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~   80 (97)
                      .+|+|.+++......+++..+..++.|++.|+.|+|+.+++|+|++++||++    +.+..+||+|||+++......
T Consensus        82 ~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill----~~~~~~kl~DfG~a~~~~~~~  154 (258)
T d1k2pa_          82 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV----NDQGVVKVSDFGLSRYVLDDE  154 (258)
T ss_dssp             TTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEE----CTTCCEEECCCSSCCBCSSSS
T ss_pred             CCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEE----cCCCcEEECcchhheeccCCC
Confidence            4788999877765679999999999999999999999999999999999999    778899999999998765443

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.71  E-value=1.5e-17  Score=100.92  Aligned_cols=70  Identities=21%  Similarity=0.340  Sum_probs=58.9

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.+++|.++.    +.+++..++.++.|++.|+.|+|+++++|||+||+||++.   ..+..++++|||+|......
T Consensus       114 ~~~~~L~~~~----~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~---~~~~~vkl~DFG~a~~~~~~  183 (328)
T d3bqca1         114 VNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID---HEHRKLRLIDWGLAEFYHPG  183 (328)
T ss_dssp             CCSCBGGGTT----TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---TTTTEEEECCGGGCEECCTT
T ss_pred             cCCCcHHHHh----cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEc---CCCCeeeecccccceeccCC
Confidence            4567776653    3499999999999999999999999999999999999994   23557999999999876653

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.6e-17  Score=101.45  Aligned_cols=72  Identities=24%  Similarity=0.314  Sum_probs=64.2

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |+..|.+|.++.+.  ..+++..++.++.|++.|+.|+|+++++|||+||+||++    +.+..++++|||+|+....
T Consensus       102 ~e~~~~~l~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~----~~~~~~kl~Dfg~a~~~~~  173 (346)
T d1cm8a_         102 MPFMGTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV----NEDCELKILDFGLARQADS  173 (346)
T ss_dssp             EECCSEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEECCS
T ss_pred             EecccccHHHHHHh--ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhc----ccccccccccccceeccCC
Confidence            45667788887765  459999999999999999999999999999999999999    7788999999999987654

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=2e-17  Score=99.82  Aligned_cols=90  Identities=13%  Similarity=0.071  Sum_probs=71.0

Q ss_pred             CCCCCHHHHHhhcc---------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCce
Q 038072            3 SSGVNFYNHSKKSA---------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDK   73 (97)
Q Consensus         3 ~~g~~l~~~l~~~~---------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a   73 (97)
                      +.+|+|.+++....         ..+++..+..++.+++.|+.|+|+++++|+|+|++||++    +.+..+||+|||++
T Consensus       105 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLl----d~~~~~Kl~DFGla  180 (308)
T d1p4oa_         105 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMT  180 (308)
T ss_dssp             CTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE----CTTCCEEECCTTCC
T ss_pred             cCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceee----cCCceEEEeecccc
Confidence            45789999886431         125888999999999999999999999999999999999    77889999999999


Q ss_pred             eeeccCCcceeeccccCcccccc
Q 038072           74 CLHERHGLLNVTGVGEGQVADIS   96 (97)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~   96 (97)
                      +.............+.+++.||+
T Consensus       181 ~~~~~~~~~~~~~~~~~t~~y~a  203 (308)
T d1p4oa_         181 RDIYETDYYRKGGKGLLPVRWMS  203 (308)
T ss_dssp             CGGGGGGCEEGGGSSEECGGGCC
T ss_pred             eeccCCcceeeccceecccccCC
Confidence            87665444443333344555654

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.7e-17  Score=100.21  Aligned_cols=75  Identities=17%  Similarity=0.212  Sum_probs=64.4

Q ss_pred             CCCCCHHHHHhhcc-----------------cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceE
Q 038072            3 SSGVNFYNHSKKSA-----------------KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMA   65 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-----------------~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~   65 (97)
                      +.||+|.+++....                 ..+++..+..++.|++.|+.|+|+++++|||+|++||++    +....+
T Consensus       109 ~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~----~~~~~~  184 (311)
T d1t46a_         109 CCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL----THGRIT  184 (311)
T ss_dssp             CTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----ETTTEE
T ss_pred             CCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccc----cccCcc
Confidence            45789999887532                 248899999999999999999999999999999999999    667899


Q ss_pred             EEeecCceeeeccCCc
Q 038072           66 KIVARGDKCLHERHGL   81 (97)
Q Consensus        66 ~i~dfg~a~~~~~~~~   81 (97)
                      +++|||.++.......
T Consensus       185 ki~DfG~~~~~~~~~~  200 (311)
T d1t46a_         185 KICDFGLARDIKNDSN  200 (311)
T ss_dssp             EECCCGGGSCTTSCTT
T ss_pred             cccccchheeccCCCc
Confidence            9999999987665433

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=2.1e-17  Score=99.83  Aligned_cols=73  Identities=18%  Similarity=0.168  Sum_probs=61.6

Q ss_pred             CCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            2 ASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         2 ~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +..++.+..........+++..++.++.|++.|+.|+|+++++|||+|++||++    ..+..+++.|||+++....
T Consensus        97 e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl----~~~~~~kl~dfg~~~~~~~  169 (318)
T d3blha1          97 DFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI----TRDGVLKLADFGLARAFSL  169 (318)
T ss_dssp             ECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTSCEEECCCTTCEECCC
T ss_pred             eccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheee----cCCCcEEeeecceeeeccc
Confidence            344455555555544669999999999999999999999999999999999999    7788999999999987653

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=3.6e-17  Score=98.72  Aligned_cols=72  Identities=25%  Similarity=0.365  Sum_probs=63.4

Q ss_pred             CCCCCHHHHHhhc---------------ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEE
Q 038072            3 SSGVNFYNHSKKS---------------AKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKI   67 (97)
Q Consensus         3 ~~g~~l~~~l~~~---------------~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i   67 (97)
                      +.||+|.+++...               ...+++..+..++.|++.|+.|+|+++++|||+|++||++    .....+||
T Consensus        93 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~----~~~~~~kl  168 (309)
T d1fvra_          93 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV----GENYVAKI  168 (309)
T ss_dssp             CTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CGGGCEEE
T ss_pred             cCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEE----cCCCceEE
Confidence            4689999998643               2448999999999999999999999999999999999999    77889999


Q ss_pred             eecCceeeecc
Q 038072           68 VARGDKCLHER   78 (97)
Q Consensus        68 ~dfg~a~~~~~   78 (97)
                      +|||+++....
T Consensus       169 ~DfG~a~~~~~  179 (309)
T d1fvra_         169 ADFGLSRGQEV  179 (309)
T ss_dssp             CCTTCEESSCE
T ss_pred             ccccccccccc
Confidence            99999976543

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.2e-17  Score=101.94  Aligned_cols=72  Identities=26%  Similarity=0.308  Sum_probs=60.9

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      |++.|++|.+++..  +++++..++.++.|++.|+.|+|+++++|||+||+||++    +.+..+++.|||++.....
T Consensus       102 ~~~~gg~L~~~~~~--~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi----~~~~~~kl~dfg~a~~~~~  173 (348)
T d2gfsa1         102 THLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV----NEDCELKILDFGLARHTDD  173 (348)
T ss_dssp             EECCSEEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTCCEEECCC----CCTG
T ss_pred             EeecCCchhhhccc--ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccc----cccccccccccchhcccCc
Confidence            35678999999965  459999999999999999999999999999999999999    7788899999999976543

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=6.8e-17  Score=96.37  Aligned_cols=75  Identities=19%  Similarity=0.096  Sum_probs=63.6

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccCCcc
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERHGLL   82 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~~~~   82 (97)
                      +.|+++..++... +.+++..+..++.|++.|+.|+|+++++|||+||+||++    .....+|++|||.++........
T Consensus        83 ~~~~~l~~~~~~~-~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli----~~~~~~kl~DFG~a~~~~~~~~~  157 (292)
T d1unla_          83 CDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI----NRNGELKLANFGLARAFGIPVRC  157 (292)
T ss_dssp             CSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTCCEEECCCTTCEECCSCCSC
T ss_pred             ccccccccccccc-cccchhHHHHHHHHHHHHHHHhhcCCEeeecccCccccc----ccCCceeeeecchhhcccCCCcc
Confidence            3456666666654 569999999999999999999999999999999999999    66788999999999887654433

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=7.6e-17  Score=97.44  Aligned_cols=73  Identities=14%  Similarity=0.172  Sum_probs=65.0

Q ss_pred             CCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            3 SSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         3 ~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      +.+++|.+++......+++..+..++.|++.|+.|+|+.+++|+|+|++||++    +....+||+|||+++.....
T Consensus       111 ~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl----~~~~~~kL~DFG~~~~~~~~  183 (311)
T d1r0pa_         111 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMYDK  183 (311)
T ss_dssp             CTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CTTCCEEECSSGGGCCTTTT
T ss_pred             eecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeE----CCCCCEEEecccchhhcccc
Confidence            45789999988765668889999999999999999999999999999999999    77889999999999876543

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.1e-16  Score=96.41  Aligned_cols=71  Identities=18%  Similarity=0.239  Sum_probs=63.3

Q ss_pred             CCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH--------cCccccCCCCCcEEEeeCCCCCceEEEeecCceee
Q 038072            4 SGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHS--------HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCL   75 (97)
Q Consensus         4 ~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~--------~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~   75 (97)
                      .+|+|.+++++.  .+++.....++.+++.|+.|+|.        .+++|+|+|++||++    +.+..+||+|||+++.
T Consensus        84 ~~g~L~~~l~~~--~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl----~~~~~~Kl~DFGl~~~  157 (303)
T d1vjya_          84 EHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV----KKNGTCCIADLGLAVR  157 (303)
T ss_dssp             TTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEE----CTTSCEEECCCTTCEE
T ss_pred             cCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEE----cCCCCeEEEecCcccc
Confidence            478999999874  48999999999999999999996        589999999999999    7788999999999998


Q ss_pred             eccCC
Q 038072           76 HERHG   80 (97)
Q Consensus        76 ~~~~~   80 (97)
                      .....
T Consensus       158 ~~~~~  162 (303)
T d1vjya_         158 HDSAT  162 (303)
T ss_dssp             EETTT
T ss_pred             ccCCC
Confidence            76544

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=4.6e-16  Score=92.04  Aligned_cols=72  Identities=11%  Similarity=0.174  Sum_probs=60.0

Q ss_pred             CCCCCHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072            3 SSGVNFYNHSKKSA-KILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus         3 ~~g~~l~~~l~~~~-~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      +.+|+|.+++.+.. ..+++..+..++.|++.|+.|+|+.+++|+|++++||++    +.+..++++|||+++....
T Consensus        83 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~----~~~~~~kl~dfg~s~~~~~  155 (262)
T d1byga_          83 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV----SEDNVAKVSDFGLTKEASS  155 (262)
T ss_dssp             CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CTTSCEEECCCCC------
T ss_pred             cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhhee----cCCCCEeecccccceecCC
Confidence            46899999987642 348999999999999999999999999999999999999    7788899999999987554

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=1.2e-15  Score=93.47  Aligned_cols=72  Identities=22%  Similarity=0.276  Sum_probs=57.1

Q ss_pred             CCCCCCCHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072            1 MASSGVNFYNHSKKSAKILLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus         1 m~~~g~~l~~~l~~~~~~l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      |+...+++.+.+.   ..+++..++.++.|++.|+.|+|+++++|||+||+||++    ..+..++++|||+++.....
T Consensus       101 ~Ey~~~~l~~~~~---~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~----~~~~~~kl~df~~~~~~~~~  172 (355)
T d2b1pa1         101 MELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTAGTS  172 (355)
T ss_dssp             EECCSEEHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTCCEEECCCCC-------
T ss_pred             EeccchHHHHhhh---cCCCHHHHHHHHHHHHHHHHHhhhcccccccCCcccccc----ccccceeeechhhhhccccc
Confidence            3455667777664   349999999999999999999999999999999999999    77788999999998876553

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.39  E-value=1.5e-13  Score=77.54  Aligned_cols=54  Identities=13%  Similarity=0.066  Sum_probs=46.5

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072           19 LLEHEVRRYTRDILRGLDHIHSHGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        19 l~~~~~~~~~~~i~~~l~~~h~~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      ++...+..++.|++.++.++|+++++|+|+||+||++.    + ..++++|||.|....
T Consensus       100 l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~----~-~~~~liDFG~a~~~~  153 (191)
T d1zara2         100 VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS----E-EGIWIIDFPQSVEVG  153 (191)
T ss_dssp             CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE----T-TEEEECCCTTCEETT
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeee----C-CCEEEEECCCcccCC
Confidence            55666778899999999999999999999999999994    2 358899999997654

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.37  E-value=6.3e-13  Score=81.01  Aligned_cols=62  Identities=26%  Similarity=0.422  Sum_probs=51.6

Q ss_pred             cccCHHHHHHHHHHHHHHHHHHHH-cCccccCCCCCcEEEeeCC--CCCceEEEeecCceeeecc
Q 038072           17 KILLEHEVRRYTRDILRGLDHIHS-HGVAHCGIKLDNILLVPGK--DAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        17 ~~l~~~~~~~~~~~i~~~l~~~h~-~~~~~~~l~~~~i~~~~~~--~~~~~~~i~dfg~a~~~~~   78 (97)
                      ..+++..++.++.|++.|+.|+|+ ++++|||+|++||++....  .....+++.|||.+.....
T Consensus       120 ~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~  184 (362)
T d1q8ya_         120 RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE  184 (362)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB
T ss_pred             cCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeeccccccccc
Confidence            558999999999999999999998 8899999999999995321  1224689999999986554

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.41  E-value=0.0036  Score=36.58  Aligned_cols=33  Identities=18%  Similarity=0.240  Sum_probs=27.5

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeec
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHE   77 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~   77 (97)
                      .+++|.|+.+.|+++    ..+...-+.||+.+....
T Consensus       183 ~giIHgDl~~dNvl~----~~~~v~gvIDF~~~~~~~  215 (316)
T d2ppqa1         183 AGVIHADLFQDNVFF----LGDELSGLIDFYFACNDL  215 (316)
T ss_dssp             EEEECSCCCGGGEEE----ETTEEEEECCCTTCEEEE
T ss_pred             cccccCCcchhhhhc----ccccceeEecccccccch
Confidence            579999999999999    556667899999987644

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.35  E-value=0.016  Score=32.65  Aligned_cols=34  Identities=15%  Similarity=0.242  Sum_probs=27.5

Q ss_pred             CccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072           42 GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus        42 ~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .++|.|+.+.|+++    .++....+.||+.+....+.
T Consensus       184 ~l~HgD~~~~Nil~----~~~~~~~lIDwe~a~~g~~~  217 (263)
T d1j7la_         184 VFSHGDLGDSNIFV----KDGKVSGFIDLGRSGRADKW  217 (263)
T ss_dssp             EEECSCCCTTSEEE----ETTEEEEECCCTTCEEEEHH
T ss_pred             EEEEeeccCcceee----cCCceEEEeechhcccCCHH
Confidence            47999999999999    55555679999998876543

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=94.13  E-value=0.016  Score=32.53  Aligned_cols=34  Identities=24%  Similarity=0.338  Sum_probs=27.6

Q ss_pred             CccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072           42 GVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus        42 ~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      .++|.|+.+.|+++    .++..+.|.||+.+....+.
T Consensus       176 ~liHgD~~~~Nvl~----~~~~~~~iID~~~~~~g~~~  209 (255)
T d1nd4a_         176 VVTHGDACLPNIMV----ENGRFSGFIDCGRLGVADRY  209 (255)
T ss_dssp             EEECSSCCGGGEEE----ETTEEEEECCCTTCEEEETH
T ss_pred             eEEeCCCCCcceEE----eCCceEEEEEchhcccCCHH
Confidence            47999999999999    55556779999998876543

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=91.23  E-value=0.083  Score=31.86  Aligned_cols=34  Identities=9%  Similarity=0.061  Sum_probs=27.3

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeeccC
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHERH   79 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~~   79 (97)
                      ..++|.|+.+.||++    .++ .++|.||.+|....+.
T Consensus       223 ~~LiHGDl~~gNIlv----~~~-~~~vID~E~a~~G~~~  256 (392)
T d2pula1         223 ETLIHGDLHTGSIFA----SEH-ETKVIDPEFAFYGPIG  256 (392)
T ss_dssp             CEEECSCCCGGGEEE----CSS-CEEECCCTTCEEECTH
T ss_pred             cceeccCCcCCceeE----cCC-ceEEechhhcccCCHH
Confidence            368999999999999    333 4799999998876653

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=89.98  E-value=0.082  Score=30.95  Aligned_cols=32  Identities=22%  Similarity=0.080  Sum_probs=24.7

Q ss_pred             cCccccCCCCCcEEEeeCCCCCceEEEeecCceeeecc
Q 038072           41 HGVAHCGIKLDNILLVPGKDAGFMAKIVARGDKCLHER   78 (97)
Q Consensus        41 ~~~~~~~l~~~~i~~~~~~~~~~~~~i~dfg~a~~~~~   78 (97)
                      .+++|.|+.+.|+++    .++  ..+.||+.+.....
T Consensus       192 ~~liHgDlh~~NvL~----~~~--~~~IDFdd~~~g~~  223 (325)
T d1zyla1         192 VLRLHGDCHAGNILW----RDG--PMFVDLDDARNGPA  223 (325)
T ss_dssp             CEECCSSCSGGGEEE----SSS--EEECCCTTCCEECT
T ss_pred             ceeecCCCCcccEEE----eCC--ceEEechhcccCcH
Confidence            368999999999998    433  35799998876543