BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038076
(345 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8G4L4|SPEE_BIFLO Probable spermidine synthase OS=Bifidobacterium longum (strain NCC
2705) GN=speE PE=3 SV=1
Length = 446
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 18/179 (10%)
Query: 89 SKYNDIVIVDTPKSRMLLLDSTYNVHSII--NKGIHKWTGSYWDEFVSLPAIVPNGPIA- 145
S YN + + + +L + + V S+ +KG+ TG Y+D ++ PA+ N A
Sbjct: 144 SIYNYLQVKNLSDRTILSTNVLFGVQSVTMKDKGL---TGMYYDTALAAPALADNANSAL 200
Query: 146 IYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGL-SDLEKPTATGGVLQVHIG 204
I G+G GT A + +P + + G EID+ + D +YF +D+ T G
Sbjct: 201 ILGMGTGTYARQLKQYYPKMNITGVEIDQKITDLAGEYFDEPADIPVTTYDGRAW----- 255
Query: 205 DVFSPSEDASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGI-DG 262
+ S D +Y I+VD + + + Q+ + +++ L P G +VN I DG
Sbjct: 256 --LAASHD---KYDVIMVDAYQDITIPFQMSSTEFFTMVREHLNPGGVMVVNMNMISDG 309
>sp|Q91YR5|MET13_MOUSE Methyltransferase-like protein 13 OS=Mus musculus GN=Mettl13 PE=1
SV=1
Length = 698
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 34/159 (21%)
Query: 146 IYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGD 205
+ GLGGG+ + D +P +++ EID +++ +FG S ++ ++VHI D
Sbjct: 500 VVGLGGGSLPLFVHDHFPKSRIDAVEIDPTMLEVATQWFGFSQSDR-------MKVHIAD 552
Query: 206 ----VFSPSEDASGRYAGIVVDLFSEGKVL------PQLEEVATWLKLKDRLMPNGRFMV 255
+ S + +A Y I+ D+ S+ L P + K+K L +G F++
Sbjct: 553 GLDYITSLAGEAPPHYDVIMFDVDSKDPTLGMSCPPPAFVDQVFLQKVKSILCHDGVFIL 612
Query: 256 NCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAFP 294
N DV + +S + L AFP
Sbjct: 613 NL-----------------VCRDVRLKDSVLAGLKAAFP 634
>sp|Q9X8S2|SPEE2_STRCO Probable spermidine synthase 2 OS=Streptomyces coelicolor (strain
ATCC BAA-471 / A3(2) / M145) GN=speE2 PE=3 SV=1
Length = 554
Score = 38.9 bits (89), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 90/232 (38%), Gaps = 23/232 (9%)
Query: 61 TTSSSSSDQYDQRQQEEEENFQVVTAVRSKYNDIVIVDTPKSRML--LLDSTYNVHSIIN 118
T++ +D +++ + V AVR+ ++V+ R L LD V
Sbjct: 250 ATATVLADDFERAARHAVYGQDVRVAVRTGVQEVVLTGDADGRPLDLFLDGRLRVRGSDE 309
Query: 119 KGIHKWTGSYWDEFVSLPAIVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILID 178
+ SY + V P+ + I G G G AA +L +++ E D L
Sbjct: 310 R-------SYHEALVHPAMGGPHARVLILGGGDGLAAREVLRHPGVRRVDVLEADPGLAR 362
Query: 179 KVRDYFGLSDLEKPTATGGVLQVHIGDVFSP-SEDASGRYAGIVVDLFSEGKVL-PQLEE 236
R GLS L + ++V GD F S Y ++ DL G +L
Sbjct: 363 LARHDPGLSTLNEHAYGDARVRVLSGDAFHRLRATPSATYDVVISDLPDPGVTASTKLYS 422
Query: 237 VATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRA 288
+ L+ L P+GR V+ G +D ARP++ W ++ +RA
Sbjct: 423 QEFYGLLRRVLAPDGRLAVHAGPVD---------ARPRAF---WTVDATLRA 462
>sp|Q9K3T2|TAM_STRCO Trans-aconitate 2-methyltransferase OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=tam PE=3 SV=1
Length = 303
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 132 FVSLPAIVPNGP-----IAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGL 186
F L A +P+ P IA G G G L+ D WP+ ++ G++ ++++ R Y G
Sbjct: 24 FTDLLARIPDLPADPPRIADLGCGPGNVTVLLADRWPTARITGYDNSPRMLERARQYAG- 82
Query: 187 SDLEKPTATGGVLQVHIGDVFSPSED 212
PT+ GG L D S + D
Sbjct: 83 -----PTSGGGHLDFAPADARSWTPD 103
>sp|Q6NTR1|MET13_XENLA Methyltransferase-like protein 13 OS=Xenopus laevis GN=mettl13 PE=2
SV=1
Length = 693
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 19/133 (14%)
Query: 136 PAIVP--NGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPT 193
P ++P + + GLGGG+ + + D +P ++E EID ++D ++F E+
Sbjct: 483 PGLLPECQASVLVIGLGGGSLSLFIHDYFPGSRVEVVEIDPSVLDVASNWFNFCQDER-- 540
Query: 194 ATGGVLQVHIGD----VFSPSEDASGRYAGIVVDLFSEGKVL------PQLEEVATWLKL 243
++VH+ D + S +++ Y I+ D+ S+ + P E +
Sbjct: 541 -----MKVHLADGLVHINSLADNGEACYDVIMFDVDSKDPSVGMSCPPPAFVEKMFLQNV 595
Query: 244 KDRLMPNGRFMVN 256
+ L NG F++N
Sbjct: 596 HNILNANGVFILN 608
>sp|B9DUY3|SPEE_STRU0 Spermidine synthase OS=Streptococcus uberis (strain ATCC BAA-854 /
0140J) GN=speE PE=3 SV=1
Length = 285
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 88 RSKYNDIVIVDTPK-SRMLLLDSTYNVHSIINKGIHKWTGSYWDEFVSLPAIVPNGPIAI 146
+S++ DI +++TP +ML+L N H + + Y + V +P V P +
Sbjct: 27 KSEWQDISVINTPSFGKMLIL----NGHVLFSDAD---NFVYNEMVVHVPMAVHPNPEKV 79
Query: 147 YGLGGGTAA-HLMLDLWPSLK-LEGWEIDEILIDKVRDYF 184
+GGG +L+L+P +K ++ E DE+L+D R YF
Sbjct: 80 LIIGGGDGGVAQVLELYPDIKQIDIVEPDEMLVDVCRQYF 119
>sp|A6TRI3|SPEE_ALKMQ Spermidine synthase OS=Alkaliphilus metalliredigens (strain QYMF)
GN=speE PE=3 SV=1
Length = 284
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 13/102 (12%)
Query: 128 YWDEFVSLP-AIVPN--GPIAIYGLGGGTAAHLMLDLWPSLK-LEGWEIDEILIDKVRDY 183
Y D V +P A+ PN + I G GGTA LM + S+K ++ EID+++ D RDY
Sbjct: 61 YHDMIVHVPMAVNPNIKNVLIIGGGDGGTARELMR--YQSIKHVDMVEIDKMVCDVARDY 118
Query: 184 FGL--SDLEKPTATGGVLQVHIGDVFSPSEDASGRYAGIVVD 223
F S+LE P + ++ D + +D +Y I++D
Sbjct: 119 FPTISSELENPRVS-----LYYEDGVAFIKDKENKYDLIIID 155
>sp|A5PK19|MET13_BOVIN Methyltransferase-like protein 13 OS=Bos taurus GN=METTL13 PE=2
SV=1
Length = 699
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 18/122 (14%)
Query: 146 IYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGD 205
+ GLGGG+ + D +P + EID +++ +FG S ++ ++VHI D
Sbjct: 500 VVGLGGGSLPLFIHDHFPKSCIHAVEIDPSMLEVATQWFGFSQSDR-------MKVHIAD 552
Query: 206 VFS-----PSEDASGRYAGIVVDLFSEGKVL------PQLEEVATWLKLKDRLMPNGRFM 254
E+A Y I+ D+ S+ L P K+K L P G F+
Sbjct: 553 GLDFITRLAEEEARPHYDVIMFDVDSKDPTLGMSCPPPAFVAQLFLQKVKSILTPEGVFI 612
Query: 255 VN 256
+N
Sbjct: 613 LN 614
>sp|B1WZ70|RSMH_CYAA5 Ribosomal RNA small subunit methyltransferase H OS=Cyanothece sp.
(strain ATCC 51142) GN=rsmH PE=3 SV=1
Length = 315
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 122 HKWTGSYWDEFVSLPAIVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVR 181
H T E + AI PNG LG G + L+L+ +P +++ G ++DE I +
Sbjct: 31 HLHTPVLCQEVIDGLAIEPNGHYLDATLGRGGHSRLILEAFPDVRVTGIDLDEEAIAITQ 90
Query: 182 DYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAGIVVDL 224
+ F L ++ LQV G+ F+ G + GI+ DL
Sbjct: 91 ENFSLMGDKR-------LQVWQGN-FADYPGEIGEFNGIIADL 125
>sp|Q8N6R0|MET13_HUMAN Methyltransferase-like protein 13 OS=Homo sapiens GN=METTL13 PE=1
SV=1
Length = 699
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 19/123 (15%)
Query: 146 IYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGD 205
+ GLGGG+ + D +P ++ EID +++ +FG S ++ ++VHI D
Sbjct: 499 VVGLGGGSLPLFVHDHFPKSCIDAVEIDPSMLEVATQWFGFSQSDR-------MKVHIAD 551
Query: 206 ------VFSPSEDASGRYAGIVVDLFSEGKVL------PQLEEVATWLKLKDRLMPNGRF 253
+ +A Y I+ D+ S+ L P E + K+K L P G F
Sbjct: 552 GLDYIASLAGGGEARPCYDVIMFDVDSKDPTLGMSCPPPAFVEQSFLQKVKSILTPEGVF 611
Query: 254 MVN 256
++N
Sbjct: 612 ILN 614
>sp|B6QLF0|BGALB_PENMQ Probable beta-galactosidase B OS=Penicillium marneffei (strain ATCC
18224 / CBS 334.59 / QM 7333) GN=lacB PE=3 SV=1
Length = 1009
Score = 37.0 bits (84), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 63/158 (39%), Gaps = 30/158 (18%)
Query: 7 TEFVINPASASRLISNPITNNTFFFFCFCFPKRGASLLLKSHLHSASRFRKANATTSSSS 66
T++ NPA + +I NPITN TF+ LH+ S SSS+
Sbjct: 408 TQYSTNPAIQTHVIRNPITNGTFYV----------------TLHTIS---------SSST 442
Query: 67 SDQYDQRQQEEEENFQVVTAVRSKYNDIVIVDTPKSRMLLLDSTYNVHSIINKGIHKWTG 126
+ + F + +Y + + ++ +S++++ D + H ++ T
Sbjct: 443 DETFQLHVNTSAGAFSI-----PRYGNSIRLNGHQSKIIVTDFQFGTHKLLYSTAEVLTY 497
Query: 127 SYWDEFVSLPAIVPNGPIAIYGLGGGTAAHLMLDLWPS 164
+ D +L VP G + + GG A ++ W S
Sbjct: 498 TVLDGIPTLALWVPTGESGEFSVLGGKWASVLRCEWCS 535
>sp|Q7MF74|SPEE_VIBVY Spermidine synthase OS=Vibrio vulnificus (strain YJ016) GN=speE
PE=3 SV=1
Length = 300
Score = 35.8 bits (81), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 30/178 (16%)
Query: 144 IAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI 203
I I GLGGG+ + +L+P ++ EID ++ YF +P+ +VH
Sbjct: 94 ILIIGLGGGSVPSALAELYPESHMDIVEIDPVVSQIAERYFYF----QPSHNT---RVHT 146
Query: 204 GD--VFSPSEDASG-RYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGI 260
GD V+ G +Y I++D F+ G+ +P+ L ++ LM + + + G +
Sbjct: 147 GDARVYIKRAGLKGQKYDFILLDAFN-GEYIPE------HLMTREFLMETKQLLSSSGVL 199
Query: 261 DGVSDMTYGAARPKSMNDVWMHNSAIRALSEAFPGKVSWKRMPERNGENFLALTGLLP 318
A S + ++ H SA F G+ ++P+ +G N + L+ L+P
Sbjct: 200 ---------VANTFSTSKLYDHESA--TYRSVF-GEFYNFKIPQESG-NRVILSMLIP 244
>sp|Q8D3Q3|SPEE_VIBVU Spermidine synthase OS=Vibrio vulnificus (strain CMCP6) GN=speE
PE=3 SV=1
Length = 299
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Query: 144 IAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI 203
I I GLGGG+ + +L+P ++ EID ++ YF +P+ +VH
Sbjct: 93 ILIIGLGGGSVPSALAELYPESHMDIVEIDPVVSQIAERYFYF----QPSHNT---RVHT 145
Query: 204 GD--VFSPSEDASG-RYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258
GD V+ G +Y I++D F+ G+ +P+ L ++ LM + + + G
Sbjct: 146 GDARVYIKRAGLKGQKYDFILLDAFN-GEYIPE------HLMTREFLMETKQLLSSSG 196
>sp|Q2VPU4|MLXIP_MOUSE MLX-interacting protein OS=Mus musculus GN=Mlxip PE=1 SV=1
Length = 917
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 233 QLEEVATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMND--VWMHNSAIRALS 290
++EE+ T + +L+P VNC +D + DM + +++ + W+ + I+ L
Sbjct: 784 EIEELNTTIISCQQLLPATGVPVNCRQLDHMRDMFDEYVKSRTLQNWKFWIFSMIIKPLF 843
Query: 291 EAFPGKVSWKRMPE 304
E+F G VS + E
Sbjct: 844 ESFKGMVSTSSLEE 857
>sp|Q82XD4|SPEE_NITEU Spermidine synthase OS=Nitrosomonas europaea (strain ATCC 19718 /
NBRC 14298) GN=speE PE=3 SV=1
Length = 325
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 128 YWDEFVSLPAIV---PNGPIAIYGLGGGTAAHLMLDLWPSL-KLEGWEIDEILIDKVRDY 183
Y + V LPAI P + + G GGTA +L+ +P++ ++ E+D +ID R +
Sbjct: 74 YHEPMVHLPAITHGDPRQALVVGGGDGGTAYNLL--RYPNMERVVLAELDRDVIDMARTW 131
Query: 184 FGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAGIVVDL 224
L + + L++H+GD + + + ++ IV+DL
Sbjct: 132 --LPKVHRGAFEDPRLELHLGDGRAFTGNCKNQFDQIVLDL 170
>sp|Q82HD9|TAM_STRAW Trans-aconitate 2-methyltransferase OS=Streptomyces avermitilis
(strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804
/ NRRL 8165 / MA-4680) GN=tam PE=3 SV=1
Length = 269
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 11/80 (13%)
Query: 132 FVSLPAIVPNGP-----IAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGL 186
F L A VP P IA G G G L+ + WP+ ++ G + ++ K Y G
Sbjct: 24 FADLLARVPELPRDPARIADLGCGPGNVTRLIAERWPTARITGLDNSPEMLAKAAAYAG- 82
Query: 187 SDLEKPTATGGVLQVHIGDV 206
PTA GG L D
Sbjct: 83 -----PTAGGGRLDFAAADA 97
>sp|A1RU43|SPEE_PYRIL Probable spermidine synthase OS=Pyrobaculum islandicum (strain DSM
4184 / JCM 9189) GN=speE PE=3 SV=1
Length = 291
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 75/187 (40%), Gaps = 33/187 (17%)
Query: 88 RSKYNDIVIVDTPK-SRMLLLD----STYNVHSIINKGIHKWTGSYWDEFVSLPAIVPN- 141
RSKY +I+I DT R L+LD S+Y + +Y+ E + PA+V +
Sbjct: 32 RSKYQEIIIADTEDFGRALILDEYIQSSY------------YDEAYYHESLVHPAMVTHI 79
Query: 142 GPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVL-- 199
P + LGGG A L L S +++D D LS P GV
Sbjct: 80 SPRDVLILGGGEGATLREALKHSTVKRA-----VMVDIDEDVVELSKKYLPQMHQGVFED 134
Query: 200 ---QVHIGDVFSPSEDA---SGRYAGIVVDLFS--EGKVLPQLEEVATWLKLKDRLMPNG 251
QV I D F E A ++ +++DL ++ QL + KL L +G
Sbjct: 135 PRAQVVIEDGFVYVEKALKNGDKFDVVIMDLTDPYSSEIAKQLYSPEFFKKLVGLLREDG 194
Query: 252 RFMVNCG 258
+ G
Sbjct: 195 IIVTQAG 201
>sp|A3DBD7|BIOC_CLOTH Malonyl-CoA O-methyltransferase BioC OS=Clostridium thermocellum
(strain ATCC 27405 / DSM 1237) GN=bioC PE=3 SV=1
Length = 283
Score = 32.7 bits (73), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 148 GLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLE 190
G G G L+LD WP ++ +I +I+ RD F S++E
Sbjct: 50 GCGTGYLTKLLLDRWPDARITAIDIAPGMIEYARDRFNESNVE 92
>sp|A5WVX1|MET13_DANRE Methyltransferase-like protein 13 OS=Danio rerio GN=mettl13 PE=2
SV=1
Length = 690
Score = 32.3 bits (72), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 11/108 (10%)
Query: 156 HLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASG 215
+ D P ++E E+D +++D + +FG ++ T G HI + S E
Sbjct: 500 QFVRDFVPCARVEVVELDPVVLDVAQTWFGFQIDDRLKVTLGDGLDHITTLESEGE---- 555
Query: 216 RYAGIVV-DLFSEGKVL------PQLEEVATWLKLKDRLMPNGRFMVN 256
RY +++ D+ S+ L P E + K+ L P G FM+N
Sbjct: 556 RYFDVIMFDVDSKDTTLGMSCPPPAFVETSLLKKVYSLLSPRGLFMLN 603
>sp|P28877|PMA1_CANAX Plasma membrane ATPase 1 OS=Candida albicans GN=PMA1 PE=1 SV=1
Length = 895
Score = 32.0 bits (71), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 230 VLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDGV 263
VL + + TW+ L L+P G + N GG+DG+
Sbjct: 738 VLGIILAIGTWITLTTMLLPKGGIIQNFGGLDGI 771
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138,746,870
Number of Sequences: 539616
Number of extensions: 6087262
Number of successful extensions: 16025
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 16012
Number of HSP's gapped (non-prelim): 27
length of query: 345
length of database: 191,569,459
effective HSP length: 118
effective length of query: 227
effective length of database: 127,894,771
effective search space: 29032113017
effective search space used: 29032113017
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)