Query 038076
Match_columns 345
No_of_seqs 246 out of 2350
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 12:15:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038076.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038076hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o4f_A Spermidine synthase; am 100.0 2.1E-33 7.2E-38 265.2 20.1 214 81-319 28-247 (294)
2 3gjy_A Spermidine synthase; AP 100.0 2.2E-30 7.5E-35 247.5 20.6 209 87-320 27-250 (317)
3 3c6k_A Spermine synthase; sper 100.0 6.1E-29 2.1E-33 241.5 18.8 212 82-319 153-380 (381)
4 1iy9_A Spermidine synthase; ro 100.0 3.7E-27 1.3E-31 221.2 21.4 211 81-317 20-236 (275)
5 3adn_A Spermidine synthase; am 100.0 9.2E-28 3.2E-32 227.6 15.0 215 80-319 27-247 (294)
6 2qfm_A Spermine synthase; sper 99.9 6.5E-26 2.2E-30 219.4 21.7 206 82-315 136-359 (364)
7 1mjf_A Spermidine synthase; sp 99.9 1.4E-25 4.9E-30 210.8 19.3 209 80-317 19-239 (281)
8 2i7c_A Spermidine synthase; tr 99.9 2.7E-25 9.3E-30 209.2 19.4 210 81-316 23-238 (283)
9 1uir_A Polyamine aminopropyltr 99.9 1.5E-25 5.3E-30 214.0 16.9 212 80-317 21-242 (314)
10 2b2c_A Spermidine synthase; be 99.9 7.3E-25 2.5E-29 209.5 19.1 211 81-317 53-269 (314)
11 1inl_A Spermidine synthase; be 99.9 1.2E-24 4.2E-29 206.1 20.1 213 79-317 33-252 (296)
12 2pt6_A Spermidine synthase; tr 99.9 1E-24 3.6E-29 209.0 18.5 213 80-318 60-278 (321)
13 2o07_A Spermidine synthase; st 99.9 2.1E-24 7.2E-29 205.4 18.3 211 81-317 40-256 (304)
14 3bwc_A Spermidine synthase; SA 99.9 2E-23 7E-28 198.3 21.0 211 80-317 36-258 (304)
15 2cmg_A Spermidine synthase; tr 99.9 1.1E-23 3.9E-28 196.3 16.8 196 80-318 17-217 (262)
16 1xj5_A Spermidine synthase 1; 99.9 1.8E-22 6.1E-27 194.5 19.7 212 81-317 65-283 (334)
17 3orh_A Guanidinoacetate N-meth 99.5 2E-14 6.8E-19 131.1 7.8 121 125-255 46-168 (236)
18 3dr5_A Putative O-methyltransf 99.5 2.4E-14 8.3E-19 129.6 7.5 102 143-256 59-162 (221)
19 3fpf_A Mtnas, putative unchara 99.5 2.9E-14 9.9E-19 134.7 7.9 146 138-318 120-265 (298)
20 3ntv_A MW1564 protein; rossman 99.5 1.1E-13 3.9E-18 125.4 10.5 105 139-256 70-175 (232)
21 1sui_A Caffeoyl-COA O-methyltr 99.5 7.3E-14 2.5E-18 128.4 8.3 105 139-256 78-189 (247)
22 3tfw_A Putative O-methyltransf 99.5 1.9E-13 6.6E-18 125.3 10.7 107 139-258 62-171 (248)
23 3hm2_A Precorrin-6Y C5,15-meth 99.4 7.6E-13 2.6E-17 113.5 12.8 108 139-261 24-131 (178)
24 3c3y_A Pfomt, O-methyltransfer 99.4 1E-13 3.6E-18 126.4 7.6 105 139-256 69-180 (237)
25 3duw_A OMT, O-methyltransferas 99.4 1.4E-13 4.6E-18 123.3 8.2 107 139-258 57-168 (223)
26 3u81_A Catechol O-methyltransf 99.4 2.6E-13 8.8E-18 121.8 8.4 110 139-259 57-172 (221)
27 3c3p_A Methyltransferase; NP_9 99.4 2.5E-13 8.5E-18 120.7 8.2 104 139-256 55-159 (210)
28 3e05_A Precorrin-6Y C5,15-meth 99.4 1.3E-12 4.4E-17 115.4 12.5 106 139-259 39-144 (204)
29 3r3h_A O-methyltransferase, SA 99.4 5.1E-14 1.7E-18 129.1 3.1 105 139-256 59-169 (242)
30 3tr6_A O-methyltransferase; ce 99.4 2.7E-13 9.1E-18 121.4 7.6 107 139-258 63-175 (225)
31 2ozv_A Hypothetical protein AT 99.4 2.7E-12 9.1E-17 118.7 14.3 113 139-257 35-170 (260)
32 1dus_A MJ0882; hypothetical pr 99.4 2.6E-12 8.8E-17 111.0 13.3 131 139-301 51-181 (194)
33 3evz_A Methyltransferase; NYSG 99.4 8.4E-12 2.9E-16 111.9 15.9 152 138-317 53-221 (230)
34 1yzh_A TRNA (guanine-N(7)-)-me 99.4 2.6E-12 9E-17 114.5 12.1 112 140-258 41-157 (214)
35 3eey_A Putative rRNA methylase 99.4 3.6E-12 1.2E-16 111.6 12.7 118 139-262 21-144 (197)
36 4gek_A TRNA (CMO5U34)-methyltr 99.4 2.9E-12 9.9E-17 118.9 12.4 108 139-257 69-178 (261)
37 3mti_A RRNA methylase; SAM-dep 99.4 1.6E-12 5.6E-17 112.7 9.3 115 139-262 21-140 (185)
38 2gpy_A O-methyltransferase; st 99.4 1.2E-12 4E-17 118.2 8.7 105 139-256 53-159 (233)
39 2esr_A Methyltransferase; stru 99.4 7.1E-13 2.4E-17 114.2 6.9 112 139-262 30-143 (177)
40 3dtn_A Putative methyltransfer 99.4 6.4E-12 2.2E-16 112.8 13.4 110 139-261 43-152 (234)
41 2avd_A Catechol-O-methyltransf 99.4 7.1E-13 2.4E-17 118.9 6.8 105 139-256 68-178 (229)
42 3dxy_A TRNA (guanine-N(7)-)-me 99.3 1.9E-12 6.5E-17 116.8 9.1 112 140-258 34-151 (218)
43 3p9n_A Possible methyltransfer 99.3 4.5E-12 1.5E-16 110.7 10.9 113 139-262 43-158 (189)
44 3lpm_A Putative methyltransfer 99.3 5.5E-12 1.9E-16 116.0 11.5 111 140-257 49-176 (259)
45 3mb5_A SAM-dependent methyltra 99.3 3.2E-12 1.1E-16 116.6 9.8 104 139-259 92-196 (255)
46 1xdz_A Methyltransferase GIDB; 99.3 5.9E-12 2E-16 114.4 11.5 104 139-257 69-174 (240)
47 2fca_A TRNA (guanine-N(7)-)-me 99.3 5.9E-12 2E-16 112.8 11.3 112 140-258 38-154 (213)
48 1zx0_A Guanidinoacetate N-meth 99.3 1.9E-12 6.5E-17 117.1 8.0 107 139-255 59-168 (236)
49 4dzr_A Protein-(glutamine-N5) 99.3 9.3E-13 3.2E-17 115.8 5.8 112 139-258 29-166 (215)
50 3jwh_A HEN1; methyltransferase 99.3 8.6E-12 2.9E-16 111.0 12.1 115 139-258 28-142 (217)
51 3njr_A Precorrin-6Y methylase; 99.3 1.1E-11 3.9E-16 110.3 12.7 105 139-261 54-158 (204)
52 3kkz_A Uncharacterized protein 99.3 7E-12 2.4E-16 115.2 11.6 112 135-259 41-152 (267)
53 3f4k_A Putative methyltransfer 99.3 9.7E-12 3.3E-16 113.1 12.4 111 135-258 41-151 (257)
54 3hem_A Cyclopropane-fatty-acyl 99.3 1.1E-11 3.8E-16 116.1 12.8 112 139-262 71-188 (302)
55 1g8a_A Fibrillarin-like PRE-rR 99.3 3.3E-11 1.1E-15 108.0 15.3 104 139-257 72-178 (227)
56 3cbg_A O-methyltransferase; cy 99.3 1.1E-12 3.6E-17 119.1 5.3 107 139-258 71-183 (232)
57 3jwg_A HEN1, methyltransferase 99.3 7E-12 2.4E-16 111.6 10.5 112 139-258 28-142 (219)
58 2hnk_A SAM-dependent O-methylt 99.3 3.3E-12 1.1E-16 115.9 7.9 106 139-257 59-181 (239)
59 1nt2_A Fibrillarin-like PRE-rR 99.3 2.4E-11 8.1E-16 108.9 13.2 104 139-257 56-161 (210)
60 1fbn_A MJ fibrillarin homologu 99.3 5.8E-11 2E-15 107.1 15.7 103 139-256 73-177 (230)
61 4df3_A Fibrillarin-like rRNA/T 99.3 9.1E-11 3.1E-15 107.2 16.4 151 139-315 76-230 (233)
62 3ckk_A TRNA (guanine-N(7)-)-me 99.3 8.8E-12 3E-16 113.7 9.6 117 140-258 46-169 (235)
63 4dcm_A Ribosomal RNA large sub 99.3 2.5E-11 8.4E-16 118.4 13.3 114 140-259 222-336 (375)
64 3dlc_A Putative S-adenosyl-L-m 99.3 1.8E-11 6.1E-16 107.9 11.1 107 140-258 43-149 (219)
65 3a27_A TYW2, uncharacterized p 99.3 1.4E-11 4.9E-16 114.6 11.0 126 138-294 117-242 (272)
66 3ofk_A Nodulation protein S; N 99.3 1.2E-11 4.1E-16 109.7 9.9 107 139-259 50-156 (216)
67 2fhp_A Methylase, putative; al 99.3 4.4E-12 1.5E-16 109.5 6.6 112 139-262 43-159 (187)
68 2bm8_A Cephalosporin hydroxyla 99.3 7E-12 2.4E-16 114.4 7.9 99 140-257 81-187 (236)
69 3ou2_A SAM-dependent methyltra 99.3 2.8E-11 9.7E-16 106.8 11.7 104 138-261 44-150 (218)
70 1nkv_A Hypothetical protein YJ 99.3 1.7E-11 5.8E-16 111.4 10.3 107 138-257 34-140 (256)
71 3mgg_A Methyltransferase; NYSG 99.3 2.2E-11 7.6E-16 112.1 11.2 117 130-258 27-143 (276)
72 3g89_A Ribosomal RNA small sub 99.3 2.2E-11 7.6E-16 112.0 11.1 105 139-258 79-185 (249)
73 2fpo_A Methylase YHHF; structu 99.3 1.1E-11 3.6E-16 110.1 8.7 109 140-261 54-164 (202)
74 3lbf_A Protein-L-isoaspartate 99.3 2.7E-11 9.4E-16 107.0 11.3 102 138-259 75-176 (210)
75 2ift_A Putative methylase HI07 99.3 1E-11 3.5E-16 110.1 8.5 111 140-261 53-167 (201)
76 3ocj_A Putative exported prote 99.3 7.4E-12 2.5E-16 117.7 7.8 115 139-262 117-232 (305)
77 2p35_A Trans-aconitate 2-methy 99.3 6.3E-11 2.2E-15 107.6 13.7 104 139-260 32-135 (259)
78 4htf_A S-adenosylmethionine-de 99.2 1.7E-11 5.7E-16 113.8 9.8 108 140-259 68-175 (285)
79 1jsx_A Glucose-inhibited divis 99.2 2.4E-11 8.1E-16 107.1 10.1 103 140-259 65-167 (207)
80 2p7i_A Hypothetical protein; p 99.2 3.8E-11 1.3E-15 107.8 11.6 104 139-261 41-145 (250)
81 2vdv_E TRNA (guanine-N(7)-)-me 99.2 2.7E-11 9.3E-16 110.5 10.8 118 140-257 49-173 (246)
82 2frn_A Hypothetical protein PH 99.2 7.6E-12 2.6E-16 116.8 6.6 105 139-260 124-228 (278)
83 2gb4_A Thiopurine S-methyltran 99.2 3.9E-11 1.3E-15 110.7 11.2 112 140-255 68-189 (252)
84 3gu3_A Methyltransferase; alph 99.2 4.7E-11 1.6E-15 111.1 11.7 109 137-259 19-128 (284)
85 4hg2_A Methyltransferase type 99.2 2E-11 6.9E-16 113.0 9.1 101 140-261 39-139 (257)
86 3g07_A 7SK snRNA methylphospha 99.2 2E-11 7E-16 114.4 9.3 118 139-257 45-220 (292)
87 3h2b_A SAM-dependent methyltra 99.2 4.6E-11 1.6E-15 104.9 10.8 105 141-262 42-146 (203)
88 1pjz_A Thiopurine S-methyltran 99.2 1.5E-11 5.3E-16 109.1 7.8 112 139-254 21-137 (203)
89 3ujc_A Phosphoethanolamine N-m 99.2 4.6E-11 1.6E-15 108.7 11.2 110 139-261 54-163 (266)
90 3g5l_A Putative S-adenosylmeth 99.2 9.5E-11 3.2E-15 106.5 13.1 105 139-259 43-147 (253)
91 1l3i_A Precorrin-6Y methyltran 99.2 4.3E-11 1.5E-15 103.1 10.2 106 138-259 31-136 (192)
92 1yb2_A Hypothetical protein TA 99.2 3E-11 1E-15 112.1 9.8 103 139-259 109-213 (275)
93 1ws6_A Methyltransferase; stru 99.2 6.6E-12 2.3E-16 106.7 4.7 107 140-262 41-152 (171)
94 1kpg_A CFA synthase;, cyclopro 99.2 9.7E-11 3.3E-15 108.5 12.8 110 139-261 63-172 (287)
95 3e23_A Uncharacterized protein 99.2 2.2E-10 7.7E-15 101.2 14.4 106 138-262 41-146 (211)
96 3dh0_A SAM dependent methyltra 99.2 3.3E-11 1.1E-15 106.9 8.9 112 139-262 36-148 (219)
97 3g5t_A Trans-aconitate 3-methy 99.2 4.9E-11 1.7E-15 111.6 10.3 108 139-256 35-148 (299)
98 1ve3_A Hypothetical protein PH 99.2 3.9E-11 1.3E-15 106.7 9.2 108 139-259 37-144 (227)
99 2fk8_A Methoxy mycolic acid sy 99.2 1.2E-10 4.2E-15 109.7 13.1 111 139-262 89-199 (318)
100 2b3t_A Protein methyltransfera 99.2 1.5E-10 5E-15 107.4 13.3 111 139-258 108-239 (276)
101 3bus_A REBM, methyltransferase 99.2 1E-10 3.4E-15 107.4 12.1 109 139-259 60-168 (273)
102 1vl5_A Unknown conserved prote 99.2 4.5E-11 1.6E-15 109.2 9.7 106 139-258 36-141 (260)
103 2yxd_A Probable cobalt-precorr 99.2 1.1E-10 3.9E-15 99.8 11.6 115 139-293 34-148 (183)
104 2pwy_A TRNA (adenine-N(1)-)-me 99.2 4.3E-11 1.5E-15 108.9 9.4 104 139-259 95-200 (258)
105 3vc1_A Geranyl diphosphate 2-C 99.2 5.1E-11 1.7E-15 112.4 10.2 111 138-261 115-225 (312)
106 3hnr_A Probable methyltransfer 99.2 8.3E-11 2.8E-15 104.4 10.9 106 139-261 44-149 (220)
107 3ajd_A Putative methyltransfer 99.2 8.6E-11 2.9E-15 109.3 11.4 117 139-262 82-216 (274)
108 3grz_A L11 mtase, ribosomal pr 99.2 2.7E-11 9.4E-16 106.8 7.6 103 139-259 59-161 (205)
109 3pfg_A N-methyltransferase; N, 99.2 3.3E-11 1.1E-15 110.3 8.4 105 139-259 49-153 (263)
110 3bxo_A N,N-dimethyltransferase 99.2 4.6E-11 1.6E-15 107.1 9.2 107 139-261 39-145 (239)
111 3l8d_A Methyltransferase; stru 99.2 1.5E-10 5.1E-15 104.1 12.6 107 139-262 52-158 (242)
112 2p8j_A S-adenosylmethionine-de 99.2 2.9E-11 1E-15 106.3 7.5 122 128-261 11-132 (209)
113 3dli_A Methyltransferase; PSI- 99.2 6.6E-11 2.3E-15 107.0 9.9 107 136-261 37-144 (240)
114 2b25_A Hypothetical protein; s 99.2 6.8E-11 2.3E-15 112.8 10.5 110 138-259 103-221 (336)
115 1o54_A SAM-dependent O-methylt 99.2 4.6E-11 1.6E-15 110.8 9.0 104 139-259 111-215 (277)
116 3d2l_A SAM-dependent methyltra 99.2 3.7E-11 1.3E-15 108.0 8.1 108 139-259 32-139 (243)
117 3sm3_A SAM-dependent methyltra 99.2 1.4E-10 4.7E-15 103.4 11.8 117 139-261 29-145 (235)
118 2igt_A SAM dependent methyltra 99.2 6.2E-11 2.1E-15 113.7 10.1 115 140-261 153-276 (332)
119 3lcc_A Putative methyl chlorid 99.2 5.1E-11 1.7E-15 107.2 8.9 111 140-262 66-176 (235)
120 3tma_A Methyltransferase; thum 99.2 1.7E-10 5.9E-15 110.9 13.0 113 138-258 201-318 (354)
121 3ggd_A SAM-dependent methyltra 99.2 1.2E-10 4E-15 105.4 11.1 111 137-261 53-167 (245)
122 2xvm_A Tellurite resistance pr 99.2 9E-11 3.1E-15 102.1 10.0 106 139-257 31-136 (199)
123 1wzn_A SAM-dependent methyltra 99.2 7.2E-11 2.5E-15 107.1 9.5 108 139-259 40-147 (252)
124 2ipx_A RRNA 2'-O-methyltransfe 99.2 8.3E-11 2.8E-15 106.1 9.8 106 139-259 76-184 (233)
125 1ri5_A MRNA capping enzyme; me 99.2 6.9E-11 2.4E-15 109.4 9.5 114 139-260 63-177 (298)
126 3dmg_A Probable ribosomal RNA 99.2 1.2E-10 4.2E-15 113.7 11.7 111 140-261 233-344 (381)
127 2yxe_A Protein-L-isoaspartate 99.2 1E-10 3.5E-15 103.7 10.1 105 138-260 75-180 (215)
128 3q7e_A Protein arginine N-meth 99.2 7.7E-11 2.6E-15 113.5 10.0 118 128-255 54-171 (349)
129 2pxx_A Uncharacterized protein 99.2 7.6E-11 2.6E-15 103.7 9.1 113 138-261 40-163 (215)
130 3cgg_A SAM-dependent methyltra 99.2 2E-10 6.9E-15 99.1 11.6 107 139-261 45-151 (195)
131 3g2m_A PCZA361.24; SAM-depende 99.2 3.7E-11 1.3E-15 112.4 7.3 113 140-261 82-194 (299)
132 3bkw_A MLL3908 protein, S-aden 99.2 2.7E-10 9.3E-15 102.3 12.6 105 139-259 42-146 (243)
133 1xtp_A LMAJ004091AAA; SGPP, st 99.1 1.7E-10 5.7E-15 104.5 11.1 107 139-258 92-198 (254)
134 2qy6_A UPF0209 protein YFCK; s 99.1 3.7E-11 1.3E-15 111.3 6.6 115 140-255 60-211 (257)
135 1ej0_A FTSJ; methyltransferase 99.1 2E-10 6.9E-15 97.1 10.7 125 138-300 20-159 (180)
136 2ex4_A Adrenal gland protein A 99.1 7.1E-11 2.4E-15 106.8 8.3 107 140-257 79-185 (241)
137 3m70_A Tellurite resistance pr 99.1 1.4E-10 4.9E-15 107.5 10.5 105 140-258 120-224 (286)
138 1dl5_A Protein-L-isoaspartate 99.1 1.2E-10 4.1E-15 110.5 10.1 105 138-260 73-178 (317)
139 2kw5_A SLR1183 protein; struct 99.1 1.3E-10 4.6E-15 101.8 9.7 105 143-262 32-136 (202)
140 2fyt_A Protein arginine N-meth 99.1 1.9E-10 6.3E-15 110.5 11.5 117 128-254 52-168 (340)
141 3e8s_A Putative SAM dependent 99.1 1.9E-10 6.4E-15 101.8 10.5 104 139-262 51-157 (227)
142 2yvl_A TRMI protein, hypotheti 99.1 1.4E-10 4.7E-15 104.8 9.8 104 139-260 90-193 (248)
143 2qm3_A Predicted methyltransfe 99.1 1.1E-10 3.6E-15 113.5 9.6 107 140-259 172-280 (373)
144 1nv8_A HEMK protein; class I a 99.1 3E-10 1E-14 106.4 12.3 109 140-258 123-250 (284)
145 1y8c_A S-adenosylmethionine-de 99.1 4.9E-11 1.7E-15 107.1 6.6 109 140-260 37-145 (246)
146 3r0q_C Probable protein argini 99.1 1.7E-10 5.9E-15 112.2 11.0 117 128-255 51-167 (376)
147 1ixk_A Methyltransferase; open 99.1 2.7E-10 9.2E-15 108.3 12.0 116 139-262 117-251 (315)
148 2o57_A Putative sarcosine dime 99.1 1.4E-10 4.7E-15 108.0 9.8 111 137-259 79-189 (297)
149 1i9g_A Hypothetical protein RV 99.1 2.3E-10 7.9E-15 105.6 11.1 107 139-260 98-206 (280)
150 2b78_A Hypothetical protein SM 99.1 1.1E-10 3.7E-15 114.1 9.2 118 139-262 211-336 (385)
151 2pjd_A Ribosomal RNA small sub 99.1 1.7E-10 5.7E-15 110.7 10.3 109 140-259 196-305 (343)
152 1xxl_A YCGJ protein; structura 99.1 3.8E-10 1.3E-14 102.1 12.0 108 138-259 19-126 (239)
153 1vbf_A 231AA long hypothetical 99.1 4.5E-10 1.5E-14 100.6 12.3 102 138-261 68-169 (231)
154 3m33_A Uncharacterized protein 99.1 7.3E-11 2.5E-15 106.1 7.1 92 139-254 47-139 (226)
155 1o9g_A RRNA methyltransferase; 99.1 3.2E-11 1.1E-15 110.1 4.7 110 140-255 51-212 (250)
156 2qe6_A Uncharacterized protein 99.1 4.1E-10 1.4E-14 104.9 12.3 111 140-261 77-200 (274)
157 3thr_A Glycine N-methyltransfe 99.1 8E-11 2.7E-15 109.3 7.4 116 139-259 56-177 (293)
158 2yqz_A Hypothetical protein TT 99.1 3.1E-10 1.1E-14 103.1 10.9 105 138-257 37-141 (263)
159 2plw_A Ribosomal RNA methyltra 99.1 3.4E-10 1.2E-14 99.1 10.8 124 138-299 20-176 (201)
160 3dp7_A SAM-dependent methyltra 99.1 4.8E-10 1.6E-14 108.3 12.8 110 140-258 179-288 (363)
161 4fsd_A Arsenic methyltransfera 99.1 3E-10 1E-14 110.6 11.3 117 139-259 82-205 (383)
162 3id6_C Fibrillarin-like rRNA/T 99.1 1.2E-08 4.2E-13 93.0 21.3 106 139-259 75-183 (232)
163 3m6w_A RRNA methylase; rRNA me 99.1 2.6E-10 8.8E-15 114.0 10.5 116 139-262 100-234 (464)
164 2y1w_A Histone-arginine methyl 99.1 2.7E-10 9.3E-15 109.6 10.4 118 128-257 38-155 (348)
165 2nxc_A L11 mtase, ribosomal pr 99.1 1.4E-10 4.9E-15 106.6 7.9 101 139-258 119-219 (254)
166 1jg1_A PIMT;, protein-L-isoasp 99.1 3.6E-10 1.2E-14 102.1 10.3 105 138-261 89-193 (235)
167 2h00_A Methyltransferase 10 do 99.1 9.6E-10 3.3E-14 100.2 13.2 79 140-224 65-148 (254)
168 3ccf_A Cyclopropane-fatty-acyl 99.1 3.6E-10 1.2E-14 104.5 10.5 103 139-261 56-158 (279)
169 2pbf_A Protein-L-isoaspartate 99.1 1.7E-10 5.7E-15 103.3 7.6 110 138-259 78-195 (227)
170 4hc4_A Protein arginine N-meth 99.1 2.4E-10 8.1E-15 111.5 9.2 119 125-254 68-186 (376)
171 3bgv_A MRNA CAP guanine-N7 met 99.1 1.5E-10 5.2E-15 109.0 7.3 119 140-260 34-158 (313)
172 3i53_A O-methyltransferase; CO 99.1 5.2E-10 1.8E-14 106.3 11.0 110 140-261 169-278 (332)
173 1i1n_A Protein-L-isoaspartate 99.1 2.9E-10 1E-14 101.6 8.6 111 138-261 75-186 (226)
174 1g6q_1 HnRNP arginine N-methyl 99.1 3.5E-10 1.2E-14 108.0 9.4 117 128-254 26-142 (328)
175 3i9f_A Putative type 11 methyl 99.1 3.3E-10 1.1E-14 96.5 8.4 102 139-262 16-117 (170)
176 1r18_A Protein-L-isoaspartate( 99.1 4.3E-10 1.5E-14 100.9 9.5 111 138-261 82-198 (227)
177 1wxx_A TT1595, hypothetical pr 99.1 6.9E-10 2.4E-14 108.1 11.6 114 140-262 209-330 (382)
178 3kr9_A SAM-dependent methyltra 99.1 2.4E-10 8.2E-15 103.9 7.8 107 139-258 14-120 (225)
179 3dou_A Ribosomal RNA large sub 99.1 3.7E-10 1.3E-14 99.7 8.6 123 138-300 23-162 (191)
180 3q87_B N6 adenine specific DNA 99.0 2.1E-09 7.2E-14 92.6 13.1 101 139-261 22-127 (170)
181 2gs9_A Hypothetical protein TT 99.0 6.7E-10 2.3E-14 97.9 10.2 102 140-262 36-137 (211)
182 4dmg_A Putative uncharacterize 99.0 4.9E-10 1.7E-14 109.9 10.0 113 139-261 213-330 (393)
183 3mcz_A O-methyltransferase; ad 99.0 5.2E-10 1.8E-14 106.9 9.9 109 141-258 180-288 (352)
184 2dul_A N(2),N(2)-dimethylguano 99.0 2.9E-10 1E-14 110.9 8.2 110 140-257 47-164 (378)
185 2nyu_A Putative ribosomal RNA 99.0 6.1E-10 2.1E-14 96.9 9.3 125 137-300 19-168 (196)
186 3gwz_A MMCR; methyltransferase 99.0 1.2E-09 4.2E-14 105.6 12.3 108 139-258 201-308 (369)
187 3k6r_A Putative transferase PH 99.0 2.4E-10 8.2E-15 107.1 7.0 104 138-258 123-226 (278)
188 2yx1_A Hypothetical protein MJ 99.0 2.8E-10 9.7E-15 109.1 7.3 102 139-261 194-295 (336)
189 3mq2_A 16S rRNA methyltransfer 99.0 4E-10 1.4E-14 100.2 7.8 108 139-258 26-141 (218)
190 3iv6_A Putative Zn-dependent a 99.0 2.4E-09 8.3E-14 99.4 13.2 109 138-261 43-152 (261)
191 2as0_A Hypothetical protein PH 99.0 5.8E-10 2E-14 109.0 9.4 116 140-262 217-340 (396)
192 3p2e_A 16S rRNA methylase; met 99.0 1.1E-10 3.8E-15 105.7 4.0 110 139-255 23-137 (225)
193 1qzz_A RDMB, aclacinomycin-10- 99.0 1E-09 3.6E-14 105.6 11.0 108 139-258 181-288 (374)
194 1p91_A Ribosomal RNA large sub 99.0 5.1E-10 1.7E-14 102.7 8.3 99 139-261 84-182 (269)
195 3gdh_A Trimethylguanosine synt 99.0 4.1E-11 1.4E-15 108.3 0.9 104 140-257 78-181 (241)
196 3c0k_A UPF0064 protein YCCW; P 99.0 9.3E-10 3.2E-14 107.6 10.4 118 139-262 219-344 (396)
197 3v97_A Ribosomal RNA large sub 99.0 5.4E-10 1.9E-14 117.2 9.0 118 139-262 538-662 (703)
198 2avn_A Ubiquinone/menaquinone 99.0 7.2E-10 2.5E-14 101.5 8.7 103 139-260 53-155 (260)
199 2frx_A Hypothetical protein YE 99.0 1.7E-09 5.7E-14 108.7 11.9 116 140-262 117-251 (479)
200 3axs_A Probable N(2),N(2)-dime 99.0 4.4E-10 1.5E-14 110.1 7.4 105 140-258 52-159 (392)
201 3cc8_A Putative methyltransfer 99.0 1.2E-09 4.3E-14 96.7 9.6 102 139-260 31-133 (230)
202 3lec_A NADB-rossmann superfami 99.0 8.3E-10 2.8E-14 100.6 8.5 107 139-258 20-126 (230)
203 3m4x_A NOL1/NOP2/SUN family pr 99.0 8.1E-10 2.8E-14 110.3 8.9 117 139-262 104-239 (456)
204 2i62_A Nicotinamide N-methyltr 99.0 2.3E-10 7.8E-15 104.1 4.4 118 140-259 56-200 (265)
205 2vdw_A Vaccinia virus capping 99.0 6.2E-10 2.1E-14 105.3 7.4 118 140-260 48-172 (302)
206 2oxt_A Nucleoside-2'-O-methylt 99.0 7.3E-10 2.5E-14 103.0 7.7 148 139-319 73-230 (265)
207 2yxl_A PH0851 protein, 450AA l 99.0 3.2E-09 1.1E-13 105.7 12.8 117 139-262 258-394 (450)
208 3ege_A Putative methyltransfer 99.0 1.3E-09 4.3E-14 100.1 9.0 101 139-260 33-133 (261)
209 3gnl_A Uncharacterized protein 99.0 1.1E-09 3.7E-14 100.7 8.4 107 139-258 20-126 (244)
210 1x19_A CRTF-related protein; m 99.0 3.5E-09 1.2E-13 101.7 12.3 107 139-257 189-295 (359)
211 2aot_A HMT, histamine N-methyl 99.0 8.5E-10 2.9E-14 103.0 7.7 113 140-260 52-175 (292)
212 3uwp_A Histone-lysine N-methyl 99.0 2.1E-09 7.2E-14 105.6 10.8 106 138-256 171-287 (438)
213 2r3s_A Uncharacterized protein 99.0 1.2E-09 4.1E-14 103.4 8.9 111 139-260 164-274 (335)
214 3fzg_A 16S rRNA methylase; met 99.0 4.3E-10 1.5E-14 99.6 4.9 103 139-258 48-152 (200)
215 1u2z_A Histone-lysine N-methyl 99.0 1.9E-09 6.5E-14 106.9 10.0 109 138-256 240-358 (433)
216 3cvo_A Methyltransferase-like 98.9 3.1E-09 1.1E-13 95.0 10.4 103 139-257 29-155 (202)
217 1sqg_A SUN protein, FMU protei 98.9 6E-09 2E-13 103.0 13.5 116 139-262 245-379 (429)
218 1tw3_A COMT, carminomycin 4-O- 98.9 1.7E-09 6E-14 103.6 9.3 109 139-259 182-290 (360)
219 2ip2_A Probable phenazine-spec 98.9 1E-09 3.4E-14 104.2 7.2 105 142-258 169-273 (334)
220 3b3j_A Histone-arginine methyl 98.9 1.1E-09 3.7E-14 110.1 7.7 107 139-257 157-263 (480)
221 3bkx_A SAM-dependent methyltra 98.9 2.2E-09 7.5E-14 98.5 9.2 114 139-262 42-164 (275)
222 2wa2_A Non-structural protein 98.9 7.9E-10 2.7E-14 103.4 6.0 146 139-318 81-237 (276)
223 3sso_A Methyltransferase; macr 98.9 1.4E-09 4.9E-14 106.4 7.8 97 139-256 215-323 (419)
224 2p41_A Type II methyltransfera 98.9 1.3E-09 4.3E-14 103.4 6.8 129 138-299 80-215 (305)
225 1wy7_A Hypothetical protein PH 98.9 1.2E-08 4.1E-13 89.7 12.8 100 140-256 49-148 (207)
226 3giw_A Protein of unknown func 98.9 6.7E-09 2.3E-13 97.0 10.8 115 140-262 78-205 (277)
227 4a6d_A Hydroxyindole O-methylt 98.9 1.2E-08 4.2E-13 98.2 12.5 105 140-257 179-283 (353)
228 1ne2_A Hypothetical protein TA 98.9 9E-09 3.1E-13 90.2 10.3 94 140-254 51-144 (200)
229 3bzb_A Uncharacterized protein 98.9 1.5E-08 5E-13 94.4 12.3 113 139-259 78-207 (281)
230 3lst_A CALO1 methyltransferase 98.9 6.9E-09 2.4E-13 99.4 10.2 106 139-259 183-288 (348)
231 3tm4_A TRNA (guanine N2-)-meth 98.9 9.1E-09 3.1E-13 99.9 10.7 103 138-247 215-321 (373)
232 2g72_A Phenylethanolamine N-me 98.8 1.5E-09 5.1E-14 100.9 4.5 116 140-257 71-215 (289)
233 3htx_A HEN1; HEN1, small RNA m 98.8 1.2E-08 4.2E-13 107.3 11.2 112 139-258 720-835 (950)
234 1vlm_A SAM-dependent methyltra 98.8 9.1E-09 3.1E-13 91.6 8.8 97 140-261 47-143 (219)
235 2jjq_A Uncharacterized RNA met 98.8 1.2E-08 4E-13 101.0 10.4 101 138-258 288-388 (425)
236 1af7_A Chemotaxis receptor met 98.8 1.9E-08 6.6E-13 93.9 10.4 114 140-255 105-250 (274)
237 2a14_A Indolethylamine N-methy 98.8 1.7E-09 5.9E-14 99.5 3.1 118 140-259 55-199 (263)
238 1fp1_D Isoliquiritigenin 2'-O- 98.8 1.3E-08 4.4E-13 98.4 8.8 98 139-256 208-305 (372)
239 1uwv_A 23S rRNA (uracil-5-)-me 98.8 2.9E-08 9.9E-13 98.3 11.0 103 139-258 285-390 (433)
240 3reo_A (ISO)eugenol O-methyltr 98.8 1.9E-08 6.5E-13 97.3 9.4 101 139-259 202-302 (368)
241 1zq9_A Probable dimethyladenos 98.8 3.9E-08 1.3E-12 92.0 11.1 75 139-224 27-101 (285)
242 1fp2_A Isoflavone O-methyltran 98.8 1.5E-08 5E-13 97.2 8.4 100 139-258 187-289 (352)
243 3hp7_A Hemolysin, putative; st 98.7 1.6E-08 5.4E-13 95.2 8.3 98 139-256 84-184 (291)
244 3p9c_A Caffeic acid O-methyltr 98.7 2.7E-08 9.2E-13 96.2 9.9 100 139-258 200-299 (364)
245 3opn_A Putative hemolysin; str 98.7 2.2E-08 7.5E-13 91.1 8.0 99 139-257 36-137 (232)
246 2ih2_A Modification methylase 98.7 1.3E-08 4.5E-13 99.3 6.4 103 139-259 38-166 (421)
247 4e2x_A TCAB9; kijanose, tetron 98.7 6E-09 2E-13 102.0 3.9 105 139-259 106-210 (416)
248 2b9e_A NOL1/NOP2/SUN domain fa 98.7 1.5E-07 5E-12 89.4 13.3 116 139-262 101-239 (309)
249 2xyq_A Putative 2'-O-methyl tr 98.7 1E-07 3.5E-12 89.7 11.3 117 139-299 62-194 (290)
250 2f8l_A Hypothetical protein LM 98.7 1.9E-08 6.6E-13 96.2 6.2 110 140-259 130-258 (344)
251 3fut_A Dimethyladenosine trans 98.7 1.3E-07 4.5E-12 88.1 11.4 99 139-256 46-144 (271)
252 3lcv_B Sisomicin-gentamicin re 98.6 2.2E-08 7.4E-13 92.7 5.8 104 139-259 131-237 (281)
253 3ldg_A Putative uncharacterize 98.6 1.6E-07 5.6E-12 91.6 12.1 113 138-258 192-344 (384)
254 3bt7_A TRNA (uracil-5-)-methyl 98.6 7.1E-08 2.4E-12 93.4 9.1 99 141-258 214-327 (369)
255 3k0b_A Predicted N6-adenine-sp 98.6 1.1E-07 3.8E-12 93.0 10.0 113 138-258 199-351 (393)
256 1qam_A ERMC' methyltransferase 98.6 3.7E-07 1.3E-11 83.3 12.7 83 129-223 19-101 (244)
257 3ldu_A Putative methylase; str 98.6 8.6E-08 2.9E-12 93.6 8.8 119 132-258 187-345 (385)
258 3gru_A Dimethyladenosine trans 98.6 1.5E-07 5.1E-12 88.7 9.9 74 138-223 48-121 (295)
259 2h1r_A Dimethyladenosine trans 98.6 7.8E-08 2.7E-12 90.6 7.9 74 139-224 41-114 (299)
260 1m6y_A S-adenosyl-methyltransf 98.6 1.1E-07 3.6E-12 90.0 8.3 78 139-224 25-106 (301)
261 2zfu_A Nucleomethylin, cerebra 98.6 1.2E-07 4.1E-12 83.7 8.0 88 139-259 66-153 (215)
262 1zg3_A Isoflavanone 4'-O-methy 98.5 1.1E-07 3.7E-12 91.3 7.8 98 140-257 193-293 (358)
263 4azs_A Methyltransferase WBDD; 98.5 9.4E-08 3.2E-12 97.8 7.1 102 139-254 65-170 (569)
264 2okc_A Type I restriction enzy 98.5 1.4E-07 4.9E-12 93.5 8.2 112 140-258 171-308 (445)
265 3tqs_A Ribosomal RNA small sub 98.5 2.5E-07 8.7E-12 85.3 9.1 73 139-223 28-103 (255)
266 3frh_A 16S rRNA methylase; met 98.5 1.1E-07 3.7E-12 87.1 6.0 103 139-258 104-206 (253)
267 3ftd_A Dimethyladenosine trans 98.4 1.2E-06 4.1E-11 80.4 11.0 99 139-256 30-130 (249)
268 3ll7_A Putative methyltransfer 98.4 1.3E-07 4.4E-12 93.1 4.3 79 140-225 93-172 (410)
269 3vyw_A MNMC2; tRNA wobble urid 98.4 5.4E-07 1.9E-11 85.1 8.4 109 141-255 97-224 (308)
270 2r6z_A UPF0341 protein in RSP 98.4 6.7E-08 2.3E-12 89.3 2.1 78 140-225 83-170 (258)
271 1yub_A Ermam, rRNA methyltrans 98.4 1.6E-08 5.3E-13 92.3 -3.0 107 139-257 28-145 (245)
272 2wk1_A NOVP; transferase, O-me 98.4 3.7E-07 1.3E-11 85.5 6.1 106 139-255 105-242 (282)
273 2ld4_A Anamorsin; methyltransf 98.3 5.4E-07 1.8E-11 77.1 5.5 89 139-257 11-101 (176)
274 2ar0_A M.ecoki, type I restric 98.3 9.9E-07 3.4E-11 89.8 8.2 118 140-259 169-314 (541)
275 2oyr_A UPF0341 protein YHIQ; a 98.3 4.1E-07 1.4E-11 84.2 4.8 81 142-225 90-173 (258)
276 3v97_A Ribosomal RNA large sub 98.3 2.3E-06 7.8E-11 89.7 11.0 113 139-257 189-347 (703)
277 3khk_A Type I restriction-modi 98.2 7.3E-07 2.5E-11 90.8 5.5 113 141-259 245-397 (544)
278 3evf_A RNA-directed RNA polyme 98.2 2.2E-06 7.4E-11 79.6 7.8 155 138-321 72-231 (277)
279 4gqb_A Protein arginine N-meth 98.2 8.6E-07 2.9E-11 91.5 5.4 102 142-254 359-464 (637)
280 1qyr_A KSGA, high level kasuga 98.2 2.7E-06 9.2E-11 78.2 7.6 60 139-209 20-79 (252)
281 3lkd_A Type I restriction-modi 98.2 7.6E-06 2.6E-10 83.3 10.9 115 140-259 221-360 (542)
282 3ua3_A Protein arginine N-meth 98.1 3.3E-06 1.1E-10 87.6 7.7 105 141-254 410-531 (745)
283 3uzu_A Ribosomal RNA small sub 98.1 3.1E-06 1.1E-10 79.1 6.1 60 139-209 41-102 (279)
284 3gcz_A Polyprotein; flavivirus 98.1 2.1E-06 7.1E-11 79.9 4.3 154 138-320 88-247 (282)
285 2oo3_A Protein involved in cat 98.0 2.9E-05 1E-09 72.4 11.6 135 127-298 82-221 (283)
286 4fzv_A Putative methyltransfer 98.0 1.5E-05 5E-10 77.1 9.9 120 139-262 147-289 (359)
287 3s1s_A Restriction endonucleas 98.0 1.2E-05 4.3E-10 84.5 8.8 117 140-259 321-467 (878)
288 3eld_A Methyltransferase; flav 98.0 7.2E-06 2.4E-10 76.8 6.3 154 138-320 79-237 (300)
289 1wg8_A Predicted S-adenosylmet 97.9 2.5E-05 8.4E-10 72.9 8.6 74 139-225 21-98 (285)
290 3pvc_A TRNA 5-methylaminomethy 97.9 8.1E-06 2.8E-10 85.1 5.2 115 140-255 58-209 (689)
291 3ps9_A TRNA 5-methylaminomethy 97.9 1.3E-05 4.4E-10 83.2 6.7 114 142-256 68-218 (676)
292 2px2_A Genome polyprotein [con 97.7 4.2E-05 1.5E-09 70.2 5.7 150 137-319 70-228 (269)
293 3p8z_A Mtase, non-structural p 97.6 0.00093 3.2E-08 60.6 13.0 152 137-319 75-231 (267)
294 3r24_A NSP16, 2'-O-methyl tran 97.5 0.00075 2.6E-08 63.1 11.3 131 127-301 92-240 (344)
295 3lkz_A Non-structural protein 97.5 0.00071 2.4E-08 63.2 11.0 152 138-319 92-249 (321)
296 3ufb_A Type I restriction-modi 97.4 0.0012 4.2E-08 66.8 12.4 113 140-259 217-364 (530)
297 1i4w_A Mitochondrial replicati 97.3 0.00023 7.7E-09 68.6 6.3 59 141-209 59-117 (353)
298 2efj_A 3,7-dimethylxanthine me 97.1 0.0058 2E-07 59.4 12.9 113 141-262 53-230 (384)
299 3tka_A Ribosomal RNA small sub 97.0 0.0009 3.1E-08 63.8 6.8 75 139-224 56-136 (347)
300 4auk_A Ribosomal RNA large sub 96.8 0.003 1E-07 61.1 8.0 100 139-261 210-309 (375)
301 2k4m_A TR8_protein, UPF0146 pr 96.7 0.0013 4.3E-08 55.5 3.9 79 139-247 34-113 (153)
302 3b5i_A S-adenosyl-L-methionine 96.4 0.0095 3.3E-07 57.6 8.7 122 141-262 53-230 (374)
303 3tos_A CALS11; methyltransfera 96.2 0.03 1E-06 51.3 10.8 138 139-306 68-248 (257)
304 2zig_A TTHA0409, putative modi 96.0 0.0063 2.1E-07 56.6 5.0 44 140-185 235-278 (297)
305 3s2e_A Zinc-containing alcohol 95.9 0.0068 2.3E-07 57.1 5.1 93 139-255 165-261 (340)
306 3m6i_A L-arabinitol 4-dehydrog 95.9 0.033 1.1E-06 52.8 9.9 96 139-255 178-281 (363)
307 1m6e_X S-adenosyl-L-methionnin 95.8 0.013 4.5E-07 56.3 6.7 117 140-262 51-214 (359)
308 1f8f_A Benzyl alcohol dehydrog 95.8 0.016 5.6E-07 55.2 7.0 94 139-255 189-287 (371)
309 3fwz_A Inner membrane protein 95.7 0.063 2.2E-06 43.8 9.5 94 141-257 7-105 (140)
310 1g55_A DNA cytosine methyltran 95.7 0.053 1.8E-06 51.5 10.2 123 141-292 2-139 (343)
311 2c7p_A Modification methylase 95.6 0.19 6.4E-06 47.5 13.5 123 141-292 11-143 (327)
312 3fpc_A NADP-dependent alcohol 95.5 0.011 3.8E-07 55.9 4.9 94 139-255 165-264 (352)
313 4eez_A Alcohol dehydrogenase 1 95.4 0.035 1.2E-06 52.1 7.8 98 139-256 162-262 (348)
314 1pl8_A Human sorbitol dehydrog 95.3 0.03 1E-06 53.1 7.1 94 139-255 170-271 (356)
315 4ej6_A Putative zinc-binding d 95.2 0.025 8.4E-07 54.1 6.1 97 139-255 181-282 (370)
316 3jv7_A ADH-A; dehydrogenase, n 95.2 0.046 1.6E-06 51.4 7.9 94 139-255 170-268 (345)
317 1uuf_A YAHK, zinc-type alcohol 95.0 0.057 2E-06 51.5 8.1 93 139-255 193-286 (369)
318 3g7u_A Cytosine-specific methy 95.0 0.25 8.7E-06 47.5 12.6 107 142-262 3-125 (376)
319 1boo_A Protein (N-4 cytosine-s 94.9 0.03 1E-06 52.7 5.8 67 194-260 10-87 (323)
320 3uko_A Alcohol dehydrogenase c 94.9 0.044 1.5E-06 52.3 7.0 94 139-255 192-293 (378)
321 3two_A Mannitol dehydrogenase; 94.7 0.077 2.6E-06 50.0 8.1 88 139-255 175-263 (348)
322 4a2c_A Galactitol-1-phosphate 94.6 0.068 2.3E-06 50.1 7.2 98 139-256 159-259 (346)
323 3c85_A Putative glutathione-re 94.5 0.24 8.1E-06 41.9 10.0 95 141-257 39-139 (183)
324 2dph_A Formaldehyde dismutase; 94.5 0.038 1.3E-06 53.2 5.4 102 139-255 184-297 (398)
325 3ggo_A Prephenate dehydrogenas 94.3 0.18 6.3E-06 47.1 9.6 95 142-261 34-131 (314)
326 2zig_A TTHA0409, putative modi 94.2 0.045 1.5E-06 50.8 5.1 64 196-259 19-99 (297)
327 1e3j_A NADP(H)-dependent ketos 94.1 0.11 3.6E-06 49.1 7.6 93 139-255 167-269 (352)
328 1id1_A Putative potassium chan 94.1 0.25 8.5E-06 40.6 9.0 100 141-260 3-108 (153)
329 3uog_A Alcohol dehydrogenase; 94.1 0.22 7.4E-06 47.2 9.7 93 139-256 188-286 (363)
330 3iht_A S-adenosyl-L-methionine 94.1 0.025 8.5E-07 47.9 2.7 103 140-257 40-147 (174)
331 3l4b_C TRKA K+ channel protien 94.0 0.29 9.9E-06 42.7 9.8 92 143-256 2-98 (218)
332 2h6e_A ADH-4, D-arabinose 1-de 94.0 0.038 1.3E-06 52.1 4.2 93 140-255 170-267 (344)
333 1kol_A Formaldehyde dehydrogen 94.0 0.069 2.4E-06 51.3 6.1 103 139-255 184-298 (398)
334 1p0f_A NADP-dependent alcohol 93.9 0.095 3.2E-06 49.8 6.9 94 139-255 190-291 (373)
335 1e3i_A Alcohol dehydrogenase, 93.9 0.1 3.6E-06 49.6 7.0 94 139-255 194-295 (376)
336 3ip1_A Alcohol dehydrogenase, 93.8 0.25 8.5E-06 47.5 9.7 95 139-255 212-316 (404)
337 1cdo_A Alcohol dehydrogenase; 93.8 0.11 3.7E-06 49.4 7.1 94 139-255 191-292 (374)
338 1pjc_A Protein (L-alanine dehy 93.8 0.17 5.8E-06 48.3 8.4 102 140-259 166-268 (361)
339 1lss_A TRK system potassium up 93.8 0.48 1.6E-05 37.5 10.0 90 142-253 5-99 (140)
340 2jhf_A Alcohol dehydrogenase E 93.8 0.13 4.3E-06 49.0 7.4 94 139-255 190-291 (374)
341 1pqw_A Polyketide synthase; ro 93.7 0.093 3.2E-06 44.9 5.8 95 139-255 37-135 (198)
342 2fzw_A Alcohol dehydrogenase c 93.7 0.11 3.9E-06 49.2 6.9 94 139-255 189-290 (373)
343 3l9w_A Glutathione-regulated p 93.7 0.21 7.2E-06 48.7 8.9 95 141-258 4-103 (413)
344 2d8a_A PH0655, probable L-thre 93.7 0.068 2.3E-06 50.3 5.3 93 140-255 167-265 (348)
345 1g60_A Adenine-specific methyl 93.6 0.075 2.6E-06 48.2 5.2 45 139-185 211-255 (260)
346 2b5w_A Glucose dehydrogenase; 93.4 0.062 2.1E-06 50.9 4.5 92 142-255 174-271 (357)
347 4dvj_A Putative zinc-dependent 93.4 0.094 3.2E-06 49.9 5.7 93 140-255 171-268 (363)
348 2g1u_A Hypothetical protein TM 93.0 0.21 7.1E-06 41.2 6.7 98 139-258 17-119 (155)
349 2dpo_A L-gulonate 3-dehydrogen 93.0 0.34 1.2E-05 45.5 9.0 106 141-259 6-125 (319)
350 2cf5_A Atccad5, CAD, cinnamyl 93.0 0.19 6.5E-06 47.5 7.2 93 140-255 180-273 (357)
351 1eg2_A Modification methylase 93.0 0.068 2.3E-06 50.4 4.0 65 196-260 36-109 (319)
352 1g60_A Adenine-specific methyl 93.0 0.055 1.9E-06 49.1 3.3 59 199-257 5-74 (260)
353 1piw_A Hypothetical zinc-type 92.9 0.12 4.2E-06 48.8 5.8 95 139-255 178-274 (360)
354 1zcj_A Peroxisomal bifunctiona 92.8 0.83 2.8E-05 45.0 11.8 102 141-259 37-152 (463)
355 3goh_A Alcohol dehydrogenase, 92.7 0.16 5.5E-06 46.9 6.2 87 139-256 141-228 (315)
356 4b7c_A Probable oxidoreductase 92.7 0.42 1.4E-05 44.5 9.1 93 139-255 148-246 (336)
357 1rjw_A ADH-HT, alcohol dehydro 92.7 0.082 2.8E-06 49.6 4.2 93 139-255 163-259 (339)
358 1yqd_A Sinapyl alcohol dehydro 92.7 0.28 9.7E-06 46.5 8.0 93 140-255 187-280 (366)
359 3b1f_A Putative prephenate deh 92.6 0.59 2E-05 42.5 9.9 93 141-258 6-101 (290)
360 2g5c_A Prephenate dehydrogenas 92.6 1.5 5.1E-05 39.5 12.5 95 142-261 2-99 (281)
361 3llv_A Exopolyphosphatase-rela 92.6 0.46 1.6E-05 38.1 8.1 68 141-224 6-78 (141)
362 2vhw_A Alanine dehydrogenase; 92.6 0.35 1.2E-05 46.4 8.6 101 140-258 167-268 (377)
363 3k96_A Glycerol-3-phosphate de 92.4 0.97 3.3E-05 43.0 11.4 103 141-258 29-133 (356)
364 1vj0_A Alcohol dehydrogenase, 92.4 0.1 3.5E-06 49.9 4.6 94 139-255 194-296 (380)
365 3hwr_A 2-dehydropantoate 2-red 92.4 0.69 2.3E-05 43.0 10.1 95 140-256 18-119 (318)
366 4e21_A 6-phosphogluconate dehy 92.3 0.54 1.9E-05 44.8 9.4 97 140-262 21-119 (358)
367 2dq4_A L-threonine 3-dehydroge 92.2 0.062 2.1E-06 50.5 2.6 92 140-255 164-260 (343)
368 3p2y_A Alanine dehydrogenase/p 92.2 0.2 6.8E-06 48.5 6.2 109 140-261 183-305 (381)
369 2hwk_A Helicase NSP2; rossman 92.1 0.11 3.6E-06 48.3 3.9 81 215-315 205-296 (320)
370 4e12_A Diketoreductase; oxidor 92.1 0.5 1.7E-05 43.1 8.7 106 141-260 4-124 (283)
371 2o3j_A UDP-glucose 6-dehydroge 91.9 1.2 4.1E-05 44.1 11.7 114 142-262 10-139 (481)
372 4dio_A NAD(P) transhydrogenase 91.9 0.24 8.2E-06 48.2 6.5 106 140-259 189-313 (405)
373 3qwb_A Probable quinone oxidor 91.5 0.19 6.5E-06 46.9 5.1 92 139-255 147-245 (334)
374 2j3h_A NADP-dependent oxidored 91.4 0.77 2.6E-05 42.7 9.3 94 139-255 154-253 (345)
375 4h0n_A DNMT2; SAH binding, tra 91.4 1.3 4.4E-05 41.8 10.8 122 142-292 4-139 (333)
376 1v3u_A Leukotriene B4 12- hydr 91.1 0.42 1.4E-05 44.4 7.1 93 139-255 144-242 (333)
377 1l7d_A Nicotinamide nucleotide 91.1 0.26 8.9E-06 47.3 5.7 44 140-185 171-215 (384)
378 2y0c_A BCEC, UDP-glucose dehyd 91.1 1.7 5.7E-05 43.1 11.7 111 141-260 8-130 (478)
379 1jvb_A NAD(H)-dependent alcoho 90.9 0.13 4.4E-06 48.4 3.3 94 139-255 169-269 (347)
380 3jyn_A Quinone oxidoreductase; 90.9 0.22 7.4E-06 46.4 4.8 92 139-255 139-237 (325)
381 3mog_A Probable 3-hydroxybutyr 90.8 0.95 3.2E-05 45.0 9.7 107 141-261 5-124 (483)
382 3qv2_A 5-cytosine DNA methyltr 90.8 1.8 6.1E-05 40.7 11.1 131 141-301 10-158 (327)
383 2f1k_A Prephenate dehydrogenas 90.7 0.93 3.2E-05 40.8 8.9 89 143-259 2-92 (279)
384 3gg2_A Sugar dehydrogenase, UD 90.7 1.9 6.3E-05 42.4 11.6 111 142-262 3-126 (450)
385 1x13_A NAD(P) transhydrogenase 90.6 0.34 1.1E-05 47.0 6.0 43 140-183 171-214 (401)
386 1bg6_A N-(1-D-carboxylethyl)-L 90.5 0.79 2.7E-05 42.7 8.4 100 142-257 5-108 (359)
387 3g0o_A 3-hydroxyisobutyrate de 90.4 1 3.5E-05 41.4 9.0 95 141-262 7-106 (303)
388 2eez_A Alanine dehydrogenase; 90.4 0.82 2.8E-05 43.5 8.5 103 140-260 165-268 (369)
389 1zej_A HBD-9, 3-hydroxyacyl-CO 90.2 1 3.5E-05 41.7 8.8 98 141-261 12-111 (293)
390 1f0y_A HCDH, L-3-hydroxyacyl-C 90.2 1.2 3.9E-05 40.9 9.1 107 141-260 15-139 (302)
391 3gms_A Putative NADPH:quinone 90.1 0.2 7E-06 46.8 3.9 92 139-255 143-241 (340)
392 3d1l_A Putative NADP oxidoredu 89.9 1.5 5.1E-05 39.2 9.4 91 142-260 11-104 (266)
393 2c0c_A Zinc binding alcohol de 89.8 0.36 1.2E-05 45.7 5.4 92 139-255 162-259 (362)
394 2eih_A Alcohol dehydrogenase; 89.7 0.58 2E-05 43.7 6.8 92 139-255 165-263 (343)
395 4eye_A Probable oxidoreductase 89.7 0.4 1.4E-05 44.9 5.7 92 139-255 158-255 (342)
396 2ew2_A 2-dehydropantoate 2-red 89.7 2.2 7.6E-05 38.6 10.6 96 142-255 4-106 (316)
397 3fbg_A Putative arginate lyase 89.5 0.39 1.3E-05 45.0 5.4 92 140-255 150-246 (346)
398 3ktd_A Prephenate dehydrogenas 89.5 0.37 1.3E-05 45.7 5.2 95 141-261 8-104 (341)
399 2cdc_A Glucose dehydrogenase g 89.4 0.29 9.9E-06 46.3 4.5 90 141-255 181-276 (366)
400 3i83_A 2-dehydropantoate 2-red 89.4 0.71 2.4E-05 42.9 7.0 99 142-256 3-104 (320)
401 3me5_A Cytosine-specific methy 89.2 3.6 0.00012 40.9 12.3 126 142-291 89-249 (482)
402 3qsg_A NAD-binding phosphogluc 89.0 3.6 0.00012 37.9 11.7 108 141-294 24-136 (312)
403 1wly_A CAAR, 2-haloacrylate re 88.8 0.63 2.2E-05 43.2 6.3 92 139-255 144-242 (333)
404 1iz0_A Quinone oxidoreductase; 88.8 0.83 2.8E-05 41.8 7.0 91 138-255 123-216 (302)
405 4a7p_A UDP-glucose dehydrogena 88.7 2 6.7E-05 42.2 10.0 127 142-294 9-148 (446)
406 2zb4_A Prostaglandin reductase 88.6 0.5 1.7E-05 44.4 5.4 93 139-255 157-258 (357)
407 2hcy_A Alcohol dehydrogenase 1 88.5 0.45 1.5E-05 44.6 5.0 93 139-255 168-267 (347)
408 3gaz_A Alcohol dehydrogenase s 88.4 0.72 2.4E-05 43.2 6.4 92 139-255 149-244 (343)
409 3tri_A Pyrroline-5-carboxylate 88.4 1.2 4.1E-05 40.6 7.7 89 141-254 3-95 (280)
410 4dup_A Quinone oxidoreductase; 88.3 0.42 1.5E-05 45.0 4.7 92 139-255 166-263 (353)
411 3trk_A Nonstructural polyprote 88.2 0.88 3E-05 41.8 6.4 81 214-315 209-301 (324)
412 3ubt_Y Modification methylase 88.2 3.5 0.00012 38.0 11.0 122 143-292 2-133 (331)
413 3nx4_A Putative oxidoreductase 88.1 1.3 4.6E-05 40.7 8.0 88 143-255 149-239 (324)
414 2q3e_A UDP-glucose 6-dehydroge 88.1 2.9 9.9E-05 41.0 10.8 114 142-262 6-135 (467)
415 4g65_A TRK system potassium up 88.1 0.41 1.4E-05 47.3 4.6 67 141-222 3-74 (461)
416 3gt0_A Pyrroline-5-carboxylate 88.0 0.98 3.3E-05 40.1 6.7 88 142-254 3-94 (247)
417 3k6j_A Protein F01G10.3, confi 87.9 2.1 7.1E-05 42.3 9.6 106 142-261 55-170 (460)
418 4gwg_A 6-phosphogluconate dehy 87.7 2.9 9.9E-05 41.5 10.5 102 141-262 4-107 (484)
419 2h78_A Hibadh, 3-hydroxyisobut 87.7 2.3 7.8E-05 38.8 9.2 92 142-261 4-100 (302)
420 2hmt_A YUAA protein; RCK, KTN, 87.5 2.2 7.4E-05 33.6 8.0 68 141-224 6-78 (144)
421 1yb5_A Quinone oxidoreductase; 87.4 1.1 3.8E-05 42.1 7.0 92 139-255 169-267 (351)
422 1mv8_A GMD, GDP-mannose 6-dehy 87.3 2.9 9.8E-05 40.6 10.1 110 143-261 2-126 (436)
423 1qor_A Quinone oxidoreductase; 87.2 0.6 2E-05 43.2 4.9 92 139-255 139-237 (327)
424 2zyd_A 6-phosphogluconate dehy 87.1 5.3 0.00018 39.4 12.0 102 140-262 14-117 (480)
425 3c24_A Putative oxidoreductase 87.0 2 6.7E-05 39.0 8.3 86 142-257 12-100 (286)
426 1rjd_A PPM1P, carboxy methyl t 86.9 3.2 0.00011 39.1 9.9 116 140-260 97-236 (334)
427 3pef_A 6-phosphogluconate dehy 86.6 1.5 5.2E-05 39.7 7.3 92 142-261 2-98 (287)
428 3guy_A Short-chain dehydrogena 86.4 5.9 0.0002 34.2 10.8 71 142-225 2-81 (230)
429 2qrv_A DNA (cytosine-5)-methyl 86.4 1.7 5.7E-05 40.4 7.5 109 140-261 15-145 (295)
430 1ldn_A L-lactate dehydrogenase 86.3 5.8 0.0002 36.7 11.3 76 140-226 5-84 (316)
431 2wtb_A MFP2, fatty acid multif 86.3 1.8 6.2E-05 45.1 8.5 105 142-260 313-430 (725)
432 2cvz_A Dehydrogenase, 3-hydrox 86.3 1.8 6E-05 39.0 7.5 89 142-260 2-92 (289)
433 2rir_A Dipicolinate synthase, 86.1 3.9 0.00013 37.4 9.9 93 139-261 155-249 (300)
434 2j8z_A Quinone oxidoreductase; 86.0 0.83 2.8E-05 42.9 5.3 92 139-255 161-259 (354)
435 4dll_A 2-hydroxy-3-oxopropiona 85.7 3.8 0.00013 37.8 9.7 95 140-262 30-128 (320)
436 1pgj_A 6PGDH, 6-PGDH, 6-phosph 85.6 2.4 8.2E-05 41.9 8.6 103 142-261 2-106 (478)
437 2aef_A Calcium-gated potassium 85.6 2.6 8.9E-05 36.8 8.1 96 141-261 9-109 (234)
438 2vz8_A Fatty acid synthase; tr 85.2 0.12 4.1E-06 61.2 -1.2 102 141-256 1241-1347(2512)
439 2izz_A Pyrroline-5-carboxylate 85.2 8.8 0.0003 35.4 12.0 93 141-260 22-120 (322)
440 2iz1_A 6-phosphogluconate dehy 85.2 3.1 0.00011 40.9 9.2 99 142-261 6-106 (474)
441 3gqv_A Enoyl reductase; medium 85.1 1.3 4.5E-05 41.9 6.2 92 139-255 163-261 (371)
442 2py6_A Methyltransferase FKBM; 84.7 1.3 4.5E-05 42.8 6.2 48 139-186 225-274 (409)
443 3pdu_A 3-hydroxyisobutyrate de 84.7 2 6.7E-05 39.0 7.0 93 142-262 2-99 (287)
444 1a5z_A L-lactate dehydrogenase 84.6 6.4 0.00022 36.4 10.7 99 143-255 2-114 (319)
445 3pqe_A L-LDH, L-lactate dehydr 84.6 8.9 0.0003 35.9 11.7 74 140-226 4-83 (326)
446 1dlj_A UDP-glucose dehydrogena 84.3 1.3 4.6E-05 42.6 6.0 102 143-254 2-114 (402)
447 3doj_A AT3G25530, dehydrogenas 84.1 2.2 7.5E-05 39.3 7.2 94 141-262 21-119 (310)
448 4ezb_A Uncharacterized conserv 83.9 6.1 0.00021 36.5 10.2 89 142-261 25-124 (317)
449 4a27_A Synaptic vesicle membra 83.8 1.9 6.4E-05 40.3 6.7 91 139-255 141-236 (349)
450 3hn2_A 2-dehydropantoate 2-red 83.4 1.4 4.8E-05 40.7 5.5 92 142-254 3-100 (312)
451 3ado_A Lambda-crystallin; L-gu 83.3 1.7 5.8E-05 40.8 6.0 109 141-262 6-128 (319)
452 1xa0_A Putative NADPH dependen 83.2 1.4 4.9E-05 40.6 5.5 90 143-255 152-244 (328)
453 1vpd_A Tartronate semialdehyde 83.2 3.8 0.00013 37.0 8.3 92 142-261 6-102 (299)
454 2p4q_A 6-phosphogluconate dehy 83.0 6.7 0.00023 38.9 10.6 100 141-261 10-112 (497)
455 3d0o_A L-LDH 1, L-lactate dehy 82.7 14 0.00047 34.2 12.1 106 141-259 6-124 (317)
456 4a0s_A Octenoyl-COA reductase/ 82.6 1.4 4.8E-05 42.7 5.4 95 139-255 219-334 (447)
457 1x0v_A GPD-C, GPDH-C, glycerol 82.6 4.2 0.00014 37.7 8.6 102 142-255 9-122 (354)
458 3qha_A Putative oxidoreductase 82.6 1.3 4.5E-05 40.6 4.9 92 141-261 15-108 (296)
459 2vn8_A Reticulon-4-interacting 82.6 1.5 5E-05 41.5 5.4 92 139-255 182-278 (375)
460 1y6j_A L-lactate dehydrogenase 82.5 6.6 0.00023 36.5 9.8 106 140-259 6-124 (318)
461 3d4o_A Dipicolinate synthase s 82.5 6.8 0.00023 35.7 9.8 92 140-261 154-247 (293)
462 3ojo_A CAP5O; rossmann fold, c 82.5 4.5 0.00015 39.5 8.9 109 141-262 11-133 (431)
463 1lld_A L-lactate dehydrogenase 82.4 11 0.00038 34.3 11.3 38 141-178 7-46 (319)
464 1txg_A Glycerol-3-phosphate de 82.1 2.9 0.0001 38.4 7.2 98 143-258 2-104 (335)
465 2v6b_A L-LDH, L-lactate dehydr 82.0 13 0.00045 34.1 11.6 101 143-255 2-114 (304)
466 3l6d_A Putative oxidoreductase 81.9 5.8 0.0002 36.4 9.1 93 141-262 9-105 (306)
467 3ghy_A Ketopantoate reductase 81.8 1.3 4.4E-05 41.3 4.6 93 141-255 3-102 (335)
468 3dfz_A SIRC, precorrin-2 dehyd 81.7 5 0.00017 35.6 8.2 102 130-262 18-125 (223)
469 3g79_A NDP-N-acetyl-D-galactos 81.5 6.8 0.00023 38.8 9.9 113 140-262 17-151 (478)
470 4gua_A Non-structural polyprot 81.5 2.2 7.5E-05 43.1 6.2 67 214-300 219-294 (670)
471 3oig_A Enoyl-[acyl-carrier-pro 81.3 8.3 0.00029 34.0 9.7 77 140-225 6-96 (266)
472 2qyt_A 2-dehydropantoate 2-red 81.1 3.8 0.00013 37.2 7.5 101 142-258 9-117 (317)
473 1tt7_A YHFP; alcohol dehydroge 80.7 1.5 5E-05 40.6 4.6 88 143-255 153-245 (330)
474 1wdk_A Fatty oxidation complex 80.6 5.7 0.0002 41.3 9.4 106 141-260 314-432 (715)
475 3dtt_A NADP oxidoreductase; st 80.4 2.5 8.4E-05 37.5 5.8 35 140-176 18-54 (245)
476 3tqh_A Quinone oxidoreductase; 80.4 3.9 0.00013 37.6 7.4 90 139-255 151-243 (321)
477 3ic5_A Putative saccharopine d 79.7 4.6 0.00016 30.4 6.5 69 141-224 5-77 (118)
478 1np3_A Ketol-acid reductoisome 79.4 2.6 8.9E-05 39.5 5.9 85 141-254 16-104 (338)
479 2raf_A Putative dinucleotide-b 78.9 2.5 8.6E-05 36.6 5.2 71 141-259 19-91 (209)
480 2pv7_A T-protein [includes: ch 78.9 2.4 8.4E-05 38.8 5.4 76 142-259 22-100 (298)
481 3pid_A UDP-glucose 6-dehydroge 78.7 3.1 0.00011 40.7 6.3 123 128-262 20-157 (432)
482 1boo_A Protein (N-4 cytosine-s 78.4 2.5 8.4E-05 39.4 5.3 61 140-210 252-312 (323)
483 3krt_A Crotonyl COA reductase; 78.4 2 6.9E-05 41.8 4.9 102 139-255 227-342 (456)
484 3h2s_A Putative NADH-flavin re 78.0 13 0.00046 31.3 9.7 99 143-257 2-103 (224)
485 4g65_A TRK system potassium up 77.7 3.4 0.00011 40.6 6.3 69 139-222 233-306 (461)
486 1wwk_A Phosphoglycerate dehydr 77.5 2.5 8.5E-05 39.2 5.0 93 140-261 141-235 (307)
487 2dbq_A Glyoxylate reductase; D 77.5 2.6 8.9E-05 39.5 5.2 93 140-261 149-243 (334)
488 2g76_A 3-PGDH, D-3-phosphoglyc 77.3 3 0.0001 39.3 5.6 94 140-262 164-259 (335)
489 3cky_A 2-hydroxymethyl glutara 77.1 4.2 0.00014 36.7 6.4 92 141-260 4-100 (301)
490 2xxj_A L-LDH, L-lactate dehydr 77.1 18 0.0006 33.4 10.8 101 143-255 2-114 (310)
491 1guz_A Malate dehydrogenase; o 77.0 14 0.00047 34.0 10.0 37 143-179 2-40 (310)
492 1zkd_A DUF185; NESG, RPR58, st 76.7 2.5 8.5E-05 40.8 4.9 45 141-185 81-132 (387)
493 1hyh_A L-hicdh, L-2-hydroxyiso 76.7 21 0.00071 32.6 11.2 75 142-226 2-79 (309)
494 3imf_A Short chain dehydrogena 76.6 11 0.00036 33.3 8.9 75 141-225 6-92 (257)
495 2gcg_A Glyoxylate reductase/hy 76.5 1.8 6.3E-05 40.5 3.9 94 140-261 154-249 (330)
496 3v8b_A Putative dehydrogenase, 76.2 16 0.00056 32.7 10.1 75 141-225 28-114 (283)
497 1yqg_A Pyrroline-5-carboxylate 76.1 6.9 0.00024 34.5 7.5 41 143-185 2-45 (263)
498 2w2k_A D-mandelate dehydrogena 76.0 2.2 7.4E-05 40.4 4.2 97 140-262 162-260 (348)
499 3ego_A Probable 2-dehydropanto 75.7 9.2 0.00032 35.0 8.4 96 142-259 3-100 (307)
500 2uyo_A Hypothetical protein ML 75.7 9.9 0.00034 35.2 8.6 113 140-261 102-222 (310)
No 1
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=100.00 E-value=2.1e-33 Score=265.21 Aligned_cols=214 Identities=18% Similarity=0.129 Sum_probs=172.3
Q ss_pred ceEEEEeeCCCCcEEEEEeCC-eEEEEEcCcCceEEEEecCCCcccchHHHHHhhcccc--CCCCCEEEEeecccHHHHH
Q 038076 81 FQVVTAVRSKYNDIVIVDTPK-SRMLLLDSTYNVHSIINKGIHKWTGSYWDEFVSLPAI--VPNGPIAIYGLGGGTAAHL 157 (345)
Q Consensus 81 ~~ll~~~~s~yg~I~V~e~~~-~r~L~ld~~~~~~~~~~~~p~~l~~~Y~~~~~~l~~~--~~p~~VLiIG~G~G~~~~~ 157 (345)
.++|++.+|+||+|.|+|+.. +|.|.+||.. |. . + .-++.|++.|++.|.. ++|++||+||+|+|.++++
T Consensus 28 ~~vl~~~~S~yQ~i~v~~s~~~G~~L~LDg~~-q~-t---e--~De~~YhE~l~h~~l~~~p~pk~VLIiGgGdG~~~re 100 (294)
T 3o4f_A 28 DNVLYHEKTDHQDLIIFENAAFGRVMALDGVV-QT-T---E--RDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLRE 100 (294)
T ss_dssp SEEEEEEC---CCEEEEEETTTEEEEEETTEE-EE-E---T--TTHHHHHHHHHHHHHHHSSCCCEEEEESCTTSHHHHH
T ss_pred eeEEEeccCCCceEEEEEcCCcceEEEECCch-hh-c---c--ccHHHHHHHHHHHHHhhCCCCCeEEEECCCchHHHHH
Confidence 379999999999999999976 7999999864 22 1 1 2246798887776643 6789999999999999999
Q ss_pred HHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccEEEEcCCCCCCCCCCcchH
Q 038076 158 MLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAGIVVDLFSEGKVLPQLEEV 237 (345)
Q Consensus 158 l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~Ii~D~f~~~~~p~~l~t~ 237 (345)
++++.+..+|++|||||+|+++|++||.. ......++||++++++||+.|++...++||+||+|++++.+++..|+|.
T Consensus 101 vlk~~~v~~v~~VEID~~Vv~~a~~~lp~--~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~D~~dp~~~~~~L~t~ 178 (294)
T 3o4f_A 101 VTRHKNVESITMVEIDAGVVSFCRQYLPN--HNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTS 178 (294)
T ss_dssp HHTCTTCCEEEEEESCHHHHHHHHHHCHH--HHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEESCCCCCCTTCCSSCC
T ss_pred HHHcCCcceEEEEcCCHHHHHHHHhcCcc--ccccccCCCcEEEEechHHHHHhhccccCCEEEEeCCCcCCCchhhcCH
Confidence 99987789999999999999999999842 1112356899999999999999999999999999999988878889999
Q ss_pred HHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHCCCCEEEEE--ecCCC-CceEEEEe
Q 038076 238 ATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAFPGKVSWKR--MPERN-GENFLALT 314 (345)
Q Consensus 238 ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F~~~v~~~~--~~~~~-~~n~v~~a 314 (345)
|||+.|+++|+|||+++++..++..+ ......++++++++|+ .|..+. +|.-. +...++++
T Consensus 179 eFy~~~~~~L~p~Gv~v~q~~sp~~~---------------~~~~~~~~~~l~~~F~-~v~~~~~~vPty~~g~w~f~~a 242 (294)
T 3o4f_A 179 AFYEGCKRCLNPGGIFVAQNGVCFLQ---------------QEEAIDSHRKLSHYFS-DVGFYQAAIPTYYGGIMTFAWA 242 (294)
T ss_dssp HHHHHHHHTEEEEEEEEEEEEESSSC---------------CHHHHHHHHHHHHHCS-EEEEEEECCTTSSSSCEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEecCCcccC---------------hHHHHHHHHHHHhhCC-ceeeeeeeeccCCCcceeheeE
Confidence 99999999999999999998766542 1467889999999999 565443 45433 44557777
Q ss_pred CCCCC
Q 038076 315 GLLPD 319 (345)
Q Consensus 315 ~~~p~ 319 (345)
++.++
T Consensus 243 s~~~~ 247 (294)
T 3o4f_A 243 TDNDA 247 (294)
T ss_dssp ESCTT
T ss_pred ECCCc
Confidence 76643
No 2
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.97 E-value=2.2e-30 Score=247.49 Aligned_cols=209 Identities=17% Similarity=0.226 Sum_probs=176.2
Q ss_pred eeCCCCcEEEEEeC---CeEEEEEcCcCceEEEEecCCCcccchHHHHHhhcccc-----CCCC--CEEEEeecccHHHH
Q 038076 87 VRSKYNDIVIVDTP---KSRMLLLDSTYNVHSIINKGIHKWTGSYWDEFVSLPAI-----VPNG--PIAIYGLGGGTAAH 156 (345)
Q Consensus 87 ~~s~yg~I~V~e~~---~~r~L~ld~~~~~~~~~~~~p~~l~~~Y~~~~~~l~~~-----~~p~--~VLiIG~G~G~~~~ 156 (345)
....|+..+++.+. ..|.|++|+.. |+++...+|..+++.|++.|++.+.. .+++ +||+||||+|.+++
T Consensus 27 ~~~~~~~~~~~~d~~~~~g~~L~lDG~~-Qs~~~l~dP~~le~~Y~e~m~~~~~~l~~~~p~p~~~rVLdIG~G~G~la~ 105 (317)
T 3gjy_A 27 YEGEYSVIELEADSYTTDGWLISINGVP-SSHIVLGQPQALEFEYMRWIATGARAFIDAHQDASKLRITHLGGGACTMAR 105 (317)
T ss_dssp EECSSSEEEEEECSSSTTEEEEEETTEE-EEEEETTCTTCCCSHHHHHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHH
T ss_pred ccceeeeEEEEecCCCCceEEEEECCEe-EEEEECCCCcchhhHHHHHHHHHHHhhcccCCCCCCCEEEEEECCcCHHHH
Confidence 34667778888763 68999999874 78888899999999999998876643 4455 99999999999999
Q ss_pred HHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccC-CCcccEEEEcCCCCCCCCCCcc
Q 038076 157 LMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDA-SGRYAGIVVDLFSEGKVLPQLE 235 (345)
Q Consensus 157 ~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~-~~~yD~Ii~D~f~~~~~p~~l~ 235 (345)
++++++|+.+|++|||||+|+++|+++|+... ++|++++++|+++|++.. +++||+||+|++++...+.+++
T Consensus 106 ~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-------~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~~~~~~L~ 178 (317)
T 3gjy_A 106 YFADVYPQSRNTVVELDAELARLSREWFDIPR-------APRVKIRVDDARMVAESFTPASRDVIIRDVFAGAITPQNFT 178 (317)
T ss_dssp HHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-------TTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTSCCCGGGS
T ss_pred HHHHHCCCcEEEEEECCHHHHHHHHHhccccC-------CCceEEEECcHHHHHhhccCCCCCEEEECCCCccccchhhh
Confidence 99998899999999999999999999998653 689999999999998653 5799999999999877778899
Q ss_pred hHHHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHCCCCEEEEEec----CCCCceEE
Q 038076 236 EVATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAFPGKVSWKRMP----ERNGENFL 311 (345)
Q Consensus 236 t~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F~~~v~~~~~~----~~~~~n~v 311 (345)
+.+||+.++++|+|||++++|+.+... ...+++++++|+++|+ .+.++..+ ++..+|+|
T Consensus 179 t~efl~~~~r~LkpgGvlv~~~~~~~~----------------~~~~~~~~~tL~~vF~-~v~~~~~~~~~~g~~~gN~V 241 (317)
T 3gjy_A 179 TVEFFEHCHRGLAPGGLYVANCGDHSD----------------LRGAKSELAGMMEVFE-HVAVIADPPMLKGRRYGNII 241 (317)
T ss_dssp BHHHHHHHHHHEEEEEEEEEEEEECTT----------------CHHHHHHHHHHHHHCS-EEEEEECHHHHTTSSCEEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEecCCcc----------------hHHHHHHHHHHHHHCC-ceEEEEecCCCCCCcCceEE
Confidence 999999999999999999999985432 1468899999999999 56655543 34678999
Q ss_pred EEeCCCCCc
Q 038076 312 ALTGLLPDL 320 (345)
Q Consensus 312 ~~a~~~p~~ 320 (345)
+++++.|..
T Consensus 242 l~As~~plp 250 (317)
T 3gjy_A 242 LMGSDTEFF 250 (317)
T ss_dssp EEEESSCCC
T ss_pred EEEECCCCC
Confidence 999877743
No 3
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=99.96 E-value=6.1e-29 Score=241.46 Aligned_cols=212 Identities=15% Similarity=0.105 Sum_probs=162.2
Q ss_pred eEEEEeeCCCCcEEEEEeCC-eEEEEEcCcCceEEEEecCCCcccchHHHHHhhcccc-CCCCCEEEEeecccHHHHHHH
Q 038076 82 QVVTAVRSKYNDIVIVDTPK-SRMLLLDSTYNVHSIINKGIHKWTGSYWDEFVSLPAI-VPNGPIAIYGLGGGTAAHLML 159 (345)
Q Consensus 82 ~ll~~~~s~yg~I~V~e~~~-~r~L~ld~~~~~~~~~~~~p~~l~~~Y~~~~~~l~~~-~~p~~VLiIG~G~G~~~~~l~ 159 (345)
++|++.+|+||+|.|+|+.. .|.|.+|+.. |.+ +.+ +.|++.|++.+.+ .+|++||+||+|+|.++++++
T Consensus 153 ~vl~~~~S~yQ~I~V~es~~~Gr~L~LDG~~-Q~t----e~D---~~Y~e~l~h~~l~~~~pkrVLIIGgGdG~~~revl 224 (381)
T 3c6k_A 153 EVVYDEDSPYQNIKILHSKQFGNILILSGDV-NLA----ESD---LAYTRAIMGSGKEDYTGKDVLILGGGDGGILCEIV 224 (381)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEETTEE-EEE----TTC---HHHHHHHTTTTCCCCTTCEEEEEECTTCHHHHHHH
T ss_pred EEEEeCCCCCceEEEEEcCCcceEEEECCce-eee----CCh---HHHHHHHHHHHhhcCCCCeEEEECCCcHHHHHHHH
Confidence 69999999999999999976 7999999864 322 111 4698888766654 567999999999999999999
Q ss_pred HhCCCCEEEEEECCHHHHHHHHHhcCCCC-CCCCCCCCCcEEEEEccccccccc---CCCcccEEEEcCCCCCC------
Q 038076 160 DLWPSLKLEGWEIDEILIDKVRDYFGLSD-LEKPTATGGVLQVHIGDVFSPSED---ASGRYAGIVVDLFSEGK------ 229 (345)
Q Consensus 160 ~~~p~~~v~~VEidp~vi~~A~~~f~~~~-~~~~~~~~~rv~v~~gDa~~~l~~---~~~~yD~Ii~D~f~~~~------ 229 (345)
++ |..+|++|||||+|+++|++||.... .......++|++++++||+.|+++ ..++||+||+|++++..
T Consensus 225 kh-~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g 303 (381)
T 3c6k_A 225 KL-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEE 303 (381)
T ss_dssp TT-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC---
T ss_pred hc-CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCceeEEEECCCCCcccCcccC
Confidence 86 45899999999999999999985321 000112457799999999999974 45789999999987532
Q ss_pred CCCCcchHHHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHCCCCEEEE----EecCC
Q 038076 230 VLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAFPGKVSWK----RMPER 305 (345)
Q Consensus 230 ~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F~~~v~~~----~~~~~ 305 (345)
....|+++|||+.|+++|+|||+++++..+.... .....+.++++++|+ .+.+. .+|.-
T Consensus 304 ~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~----------------~~~~~i~~tl~~vF~-~v~~~~~~~~VPSy 366 (381)
T 3c6k_A 304 DSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLT----------------EALSLYEEQLGRLYC-PVEFSKEIVCVPSY 366 (381)
T ss_dssp -CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCH----------------HHHHHHHHHHTTSSS-CEEEEEEEECCGGG
T ss_pred cchHHHHHHHHHHHHHhcCCCCEEEEecCCCcch----------------hHHHHHHHHHHHhCC-cceEeeEEEEecCC
Confidence 1235899999999999999999999886654431 356788999999999 55432 35654
Q ss_pred CCceEEEEeCCCCC
Q 038076 306 NGENFLALTGLLPD 319 (345)
Q Consensus 306 ~~~n~v~~a~~~p~ 319 (345)
.+...+.++++..+
T Consensus 367 ~~~W~F~~aSK~~~ 380 (381)
T 3c6k_A 367 LELWVFYTVWKKAK 380 (381)
T ss_dssp SSCEEEEEEEECCC
T ss_pred CCceeeeEEECCCC
Confidence 45566777776543
No 4
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.95 E-value=3.7e-27 Score=221.19 Aligned_cols=211 Identities=17% Similarity=0.174 Sum_probs=165.0
Q ss_pred ceEEEEeeCCCCcEEEEEeCC-eEEEEEcCcCceEEEEecCCCcccchHHHHHhhcccc--CCCCCEEEEeecccHHHHH
Q 038076 81 FQVVTAVRSKYNDIVIVDTPK-SRMLLLDSTYNVHSIINKGIHKWTGSYWDEFVSLPAI--VPNGPIAIYGLGGGTAAHL 157 (345)
Q Consensus 81 ~~ll~~~~s~yg~I~V~e~~~-~r~L~ld~~~~~~~~~~~~p~~l~~~Y~~~~~~l~~~--~~p~~VLiIG~G~G~~~~~ 157 (345)
.+++++.+|+||+|+|+++.. .|.|.+|+. .|++. ...+.|.+.|..++.. .++++||+||||+|.++++
T Consensus 20 ~~~l~~~~s~~~~i~v~~~~~~g~~L~ldg~-~q~~~------~de~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~ 92 (275)
T 1iy9_A 20 NKTLHTEQTEFQHLEMVETEEFGNMLFLDGM-VMTSE------KDEFVYHEMVAHVPLFTHPNPEHVLVVGGGDGGVIRE 92 (275)
T ss_dssp EEEEEEEECSSCEEEEEEETTTEEEEEETTE-EEEET------TTHHHHHHHHHHHHHHHSSSCCEEEEESCTTCHHHHH
T ss_pred eeEEEEEECCCceEEEEEcCCCCEEEEECCE-Eeecc------cchhHHHHHHHHHHHhhCCCCCEEEEECCchHHHHHH
Confidence 469999999999999999865 699999975 23321 1245688776655432 4678999999999999999
Q ss_pred HHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccEEEEcCCCCCCCCCCcchH
Q 038076 158 MLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAGIVVDLFSEGKVLPQLEEV 237 (345)
Q Consensus 158 l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~Ii~D~f~~~~~p~~l~t~ 237 (345)
++++.+..+|++|||||+++++|+++|..... ...++|++++++|+++++...+++||+|++|.+++...+.++++.
T Consensus 93 l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~---~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~ 169 (275)
T 1iy9_A 93 ILKHPSVKKATLVDIDGKVIEYSKKFLPSIAG---KLDDPRVDVQVDDGFMHIAKSENQYDVIMVDSTEPVGPAVNLFTK 169 (275)
T ss_dssp HTTCTTCSEEEEEESCHHHHHHHHHHCHHHHT---TTTSTTEEEEESCSHHHHHTCCSCEEEEEESCSSCCSCCCCCSTT
T ss_pred HHhCCCCceEEEEECCHHHHHHHHHHhHhhcc---ccCCCceEEEECcHHHHHhhCCCCeeEEEECCCCCCCcchhhhHH
Confidence 99876778999999999999999999831000 013689999999999998776789999999998866666788999
Q ss_pred HHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHCCCCEEEEE--ecCC-CCceEEEEe
Q 038076 238 ATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAFPGKVSWKR--MPER-NGENFLALT 314 (345)
Q Consensus 238 ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F~~~v~~~~--~~~~-~~~n~v~~a 314 (345)
+|++.++++|+|||++++|..++..+ ....+.+.++++++|+ .+..+. +|.- .+.+.++++
T Consensus 170 ~~~~~~~~~L~pgG~lv~~~~~~~~~---------------~~~~~~~~~~l~~~F~-~v~~~~~~vp~~~~g~w~~~~a 233 (275)
T 1iy9_A 170 GFYAGIAKALKEDGIFVAQTDNPWFT---------------PELITNVQRDVKEIFP-ITKLYTANIPTYPSGLWTFTIG 233 (275)
T ss_dssp HHHHHHHHHEEEEEEEEEECCCTTTC---------------HHHHHHHHHHHHTTCS-EEEEEEECCTTSGGGCEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEcCCcccc---------------HHHHHHHHHHHHHhCC-CeEEEEEecCcccCcceEEEEe
Confidence 99999999999999999997654321 1568899999999999 565444 4442 244556677
Q ss_pred CCC
Q 038076 315 GLL 317 (345)
Q Consensus 315 ~~~ 317 (345)
++.
T Consensus 234 sk~ 236 (275)
T 1iy9_A 234 SKK 236 (275)
T ss_dssp ESS
T ss_pred eCC
Confidence 654
No 5
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.95 E-value=9.2e-28 Score=227.61 Aligned_cols=215 Identities=18% Similarity=0.124 Sum_probs=155.4
Q ss_pred CceEEEEeeCCCCcEEEEEeCC-eEEEEEcCcCceEEEEecCCCcccchHHHHHhhcccc--CCCCCEEEEeecccHHHH
Q 038076 80 NFQVVTAVRSKYNDIVIVDTPK-SRMLLLDSTYNVHSIINKGIHKWTGSYWDEFVSLPAI--VPNGPIAIYGLGGGTAAH 156 (345)
Q Consensus 80 ~~~ll~~~~s~yg~I~V~e~~~-~r~L~ld~~~~~~~~~~~~p~~l~~~Y~~~~~~l~~~--~~p~~VLiIG~G~G~~~~ 156 (345)
..+++++.+|+||+|.|+++.. .|.|.+|+.. |.+ .+ -.+.|.+.+..++.. .++++||+||||+|.+++
T Consensus 27 ~~~~l~~~~s~~q~i~v~~~~~~g~~L~ldg~~-~~~----~~--de~~Y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~ 99 (294)
T 3adn_A 27 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVV-QTT----ER--DEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLR 99 (294)
T ss_dssp CSCEEEEC----CCCEEECCTTTCCEEEETTEE-EEE----TT--THHHHHHHHHHHHHHHSTTCCEEEEESCTTCHHHH
T ss_pred cccEEEEeECCCceEEEEEcCCcceEEEECCeE-eec----cC--chhHHHHHHHHHHHhcCCCCCEEEEEeCChhHHHH
Confidence 4579999999999999999965 6899999864 222 22 246788777665543 568999999999999999
Q ss_pred HHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccEEEEcCCCCCCCCCCcch
Q 038076 157 LMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAGIVVDLFSEGKVLPQLEE 236 (345)
Q Consensus 157 ~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~Ii~D~f~~~~~p~~l~t 236 (345)
+++++.+..+|++|||||+|+++|++++.... .....++|++++++|++++++..+++||+|++|.+++...+..+++
T Consensus 100 ~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~--~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~D~~~p~~~~~~l~~ 177 (294)
T 3adn_A 100 EVTRHKNVESITMVEIDAGVVSFCRQYLPNHN--AGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFT 177 (294)
T ss_dssp HHHTCTTCCEEEEECSCTTHHHHHHHHCHHHH--SSCTTCTTCCEECSCSCC---CCCCCEEEEEECC----------CC
T ss_pred HHHhCCCCCEEEEEECCHHHHHHHHHhhhhcc--cccccCCceEEEEChHHHHHhhcCCCccEEEECCCCccCcchhccH
Confidence 99987777899999999999999999985321 0012378999999999999987788999999999887665667899
Q ss_pred HHHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHCCCCEEEE--EecCCCCce-EEEE
Q 038076 237 VATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAFPGKVSWK--RMPERNGEN-FLAL 313 (345)
Q Consensus 237 ~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F~~~v~~~--~~~~~~~~n-~v~~ 313 (345)
.+|++.++++|+|||++++|..++..+ ....+.+.++++++|+ .+..+ .+|...+++ .+++
T Consensus 178 ~~f~~~~~~~LkpgG~lv~~~~s~~~~---------------~~~~~~~~~~l~~~F~-~v~~~~~~vp~~p~g~~~f~~ 241 (294)
T 3adn_A 178 SAFYEGCKRCLNPGGIFVAQNGVCFLQ---------------QEEAIDSHRKLSHYFS-DVGFYQAAIPTYYGGIMTFAW 241 (294)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEEECSSC---------------CHHHHHHHHHHHHHCS-EEEEEEEECTTSSSSEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEecCCcccc---------------hHHHHHHHHHHHHHCC-CeEEEEEEecccCCCceEEEE
Confidence 999999999999999999998655431 1468899999999999 55444 345543444 4677
Q ss_pred eCCCCC
Q 038076 314 TGLLPD 319 (345)
Q Consensus 314 a~~~p~ 319 (345)
+++.++
T Consensus 242 as~~~~ 247 (294)
T 3adn_A 242 ATDNDA 247 (294)
T ss_dssp EESCTT
T ss_pred EeCCcc
Confidence 776653
No 6
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.94 E-value=6.5e-26 Score=219.38 Aligned_cols=206 Identities=16% Similarity=0.150 Sum_probs=153.1
Q ss_pred eEEEEeeCCCCcEEEEEeCC-eEEEEEcCcCceEEEEecCCCcccchHHHHHhhcccc-CCCCCEEEEeecccHHHHHHH
Q 038076 82 QVVTAVRSKYNDIVIVDTPK-SRMLLLDSTYNVHSIINKGIHKWTGSYWDEFVSLPAI-VPNGPIAIYGLGGGTAAHLML 159 (345)
Q Consensus 82 ~ll~~~~s~yg~I~V~e~~~-~r~L~ld~~~~~~~~~~~~p~~l~~~Y~~~~~~l~~~-~~p~~VLiIG~G~G~~~~~l~ 159 (345)
+++++.+|+||+|.|++++. .|.|.+|+.. |++ ..+ +.|++.|+..+.. ++|++||+||+|+|.++++++
T Consensus 136 ~vl~~~~S~yQ~I~V~es~~~G~~L~LDG~~-q~t----e~D---~~YhE~l~~~~~~~p~pkrVL~IGgG~G~~arell 207 (364)
T 2qfm_A 136 EVVYDEDSPYQNIKILHSKQFGNILILSGDV-NLA----ESD---LAYTRAIMGSGKEDYTGKDVLILGGGDGGILCEIV 207 (364)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEETTEE-EEE----TTC---HHHHHHHTTTTCCCCTTCEEEEEECTTCHHHHHHH
T ss_pred eEEEeccCCCeeEEEEEeCCcceEEEECCEE-eee----cCc---hHHHHHHhhhhhhCCCCCEEEEEECChhHHHHHHH
Confidence 68999999999999999876 6999999975 332 122 5799877665542 468999999999999999999
Q ss_pred HhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCC---CcEEEEEccccccccc---CCCcccEEEEcCCC-CCC-CC
Q 038076 160 DLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATG---GVLQVHIGDVFSPSED---ASGRYAGIVVDLFS-EGK-VL 231 (345)
Q Consensus 160 ~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~---~rv~v~~gDa~~~l~~---~~~~yD~Ii~D~f~-~~~-~p 231 (345)
++.+ .+|++|||||+|+++|+++|.... .....+ +|++++++|+++|+++ .+++||+||+|+++ +.. .|
T Consensus 208 k~~~-~~Vt~VEID~~vie~Ar~~~~~l~--~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~~~p 284 (364)
T 2qfm_A 208 KLKP-KMVTMVEIDQMVIDGCKKYMRKTC--GDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSP 284 (364)
T ss_dssp TTCC-SEEEEEESCHHHHHHHHHHCCC------CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC-
T ss_pred HCCC-CEEEEEECCHHHHHHHHHHHHHhc--cccccccCCCcEEEEECcHHHHHHhhhccCCCceEEEECCCCcccCcCc
Confidence 8754 899999999999999999986321 111223 4899999999999975 47899999999987 432 35
Q ss_pred CCcchHHHHHHH----HhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHCCCCEEE--EE--ec
Q 038076 232 PQLEEVATWLKL----KDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAFPGKVSW--KR--MP 303 (345)
Q Consensus 232 ~~l~t~ef~~~~----~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F~~~v~~--~~--~~ 303 (345)
.++++.+||+.+ +++|+|||+++++..+.... +.....-+.+++.|+ .|.+ +. +|
T Consensus 285 ~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~----------------e~~~~~~~~l~~~F~-~v~~~~~~~~vP 347 (364)
T 2qfm_A 285 EEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLT----------------EALSLYEEQLGRLYC-PVEFSKEIVCVP 347 (364)
T ss_dssp ---CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCH----------------HHHHHHHHHHTTSSS-CEEEEEEEECCG
T ss_pred hhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchH----------------HHHHHHHHHHHHhCC-ceEEeeEeeecC
Confidence 568999999999 99999999999998766541 333333345999999 6765 33 45
Q ss_pred CCCCceEEEEeC
Q 038076 304 ERNGENFLALTG 315 (345)
Q Consensus 304 ~~~~~n~v~~a~ 315 (345)
.-.+...+..++
T Consensus 348 sy~~~w~f~~~~ 359 (364)
T 2qfm_A 348 SYLELWVFYTVW 359 (364)
T ss_dssp GGSSCEEEEEEE
T ss_pred CchhheEeEEee
Confidence 433433344443
No 7
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.94 E-value=1.4e-25 Score=210.83 Aligned_cols=209 Identities=18% Similarity=0.134 Sum_probs=160.4
Q ss_pred CceEEEEeeCCCCcEEEEEeCC-eEEEEEcCcCceEEEEecCCCcccchHHHHHhhccc--cCCCCCEEEEeecccHHHH
Q 038076 80 NFQVVTAVRSKYNDIVIVDTPK-SRMLLLDSTYNVHSIINKGIHKWTGSYWDEFVSLPA--IVPNGPIAIYGLGGGTAAH 156 (345)
Q Consensus 80 ~~~ll~~~~s~yg~I~V~e~~~-~r~L~ld~~~~~~~~~~~~p~~l~~~Y~~~~~~l~~--~~~p~~VLiIG~G~G~~~~ 156 (345)
..+++++.+|+||.|.|+++.. .|.|.+|+.. |++ . ...+.|.+.+...+. ..++++||+||||+|.+++
T Consensus 19 ~~~~l~~~~s~~~~i~v~~~~~~g~~L~ldg~~-q~~----~--~d~~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~ 91 (281)
T 1mjf_A 19 IKKKIYEKLSKYQKIEVYETEGFGRLLALDGTV-QLV----T--LGERSYHEPLVHPAMLAHPKPKRVLVIGGGDGGTVR 91 (281)
T ss_dssp EEEEEEEEECSSCEEEEEEESSSCEEEEETTEE-EEE----T--TTTHHHHHHHHHHHHHHSSCCCEEEEEECTTSHHHH
T ss_pred eccEEEEeeCCCccEEEEECCCccEEEEECCEe-eec----c--ccchHHHHHHHHHHHhhCCCCCeEEEEcCCcCHHHH
Confidence 3469999999999999999864 5999999742 332 1 124568777664432 2567899999999999999
Q ss_pred HHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCC-------CCCcEEEEEcccccccccCCCcccEEEEcCCCCCC
Q 038076 157 LMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTA-------TGGVLQVHIGDVFSPSEDASGRYAGIVVDLFSEGK 229 (345)
Q Consensus 157 ~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~-------~~~rv~v~~gDa~~~l~~~~~~yD~Ii~D~f~~~~ 229 (345)
+++++ +..+|++||+||.+++.|++++.... .. .+++++++.+|+++++.. +++||+|++|.+++..
T Consensus 92 ~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~----~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~fD~Ii~d~~~~~~ 165 (281)
T 1mjf_A 92 EVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDN----GLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGFDVIIADSTDPVG 165 (281)
T ss_dssp HHTTS-CCSEEEEEESCHHHHHHHHHHTCTTT----THHHHHHTTCCSSEEEEESCHHHHHHH-CCCEEEEEEECCCCC-
T ss_pred HHHhC-CCCEEEEEECCHHHHHHHHHHHhhcc----ccccccccCCCCcEEEEECchHHHhcc-cCCeeEEEECCCCCCC
Confidence 99987 88899999999999999999983210 01 268999999999999876 7889999999987655
Q ss_pred CCCCcchHHHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHCCCCEEEEE--ecCCCC
Q 038076 230 VLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAFPGKVSWKR--MPERNG 307 (345)
Q Consensus 230 ~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F~~~v~~~~--~~~~~~ 307 (345)
.+.++++.+|++.++++|+|||+++++..+...+ ....+.+.++++++|+ .+..+. +|...+
T Consensus 166 ~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~---------------~~~~~~~~~~l~~~f~-~v~~~~~~vP~~~g 229 (281)
T 1mjf_A 166 PAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLF---------------TDELISAYKEMKKVFD-RVYYYSFPVIGYAS 229 (281)
T ss_dssp ----TTSHHHHHHHHHHEEEEEEEEEEEEETTTS---------------HHHHHHHHHHHHHHCS-EEEEEEECCTTSSS
T ss_pred cchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccC---------------HHHHHHHHHHHHHHCC-ceEEEEEecCCCCc
Confidence 5567788999999999999999999997654321 1568889999999999 565544 455545
Q ss_pred ceEEEEeCCC
Q 038076 308 ENFLALTGLL 317 (345)
Q Consensus 308 ~n~v~~a~~~ 317 (345)
.+.++++++.
T Consensus 230 ~~~~~~as~~ 239 (281)
T 1mjf_A 230 PWAFLVGVKG 239 (281)
T ss_dssp SEEEEEEEES
T ss_pred eEEEEEeeCC
Confidence 6667777654
No 8
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.93 E-value=2.7e-25 Score=209.23 Aligned_cols=210 Identities=19% Similarity=0.222 Sum_probs=162.6
Q ss_pred ceEEEEeeCCCCcEEEEEeCC-eEEEEEcCcCceEEEEecCCCcccchHHHHHhhcccc--CCCCCEEEEeecccHHHHH
Q 038076 81 FQVVTAVRSKYNDIVIVDTPK-SRMLLLDSTYNVHSIINKGIHKWTGSYWDEFVSLPAI--VPNGPIAIYGLGGGTAAHL 157 (345)
Q Consensus 81 ~~ll~~~~s~yg~I~V~e~~~-~r~L~ld~~~~~~~~~~~~p~~l~~~Y~~~~~~l~~~--~~p~~VLiIG~G~G~~~~~ 157 (345)
.+++++.+|+||+|.|++++. .|.|.+|+.. |++ . .....|.+.+..++.+ .++++||+||||+|.++++
T Consensus 23 ~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~-q~~----~--~~e~~Y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~ 95 (283)
T 2i7c_A 23 KKILYETKSKYQNVLVFESTTYGKVLVLDGVI-QLT----E--KDEFAYHEMMTHVPMTVSKEPKNVLVVGGGDGGIIRE 95 (283)
T ss_dssp EEEEEEEECSSSEEEEEEESSSCEEEEETTEE-EEE----T--TTHHHHHHHHHHHHHTTSSSCCEEEEEECTTSHHHHH
T ss_pred ccEEEEEECCCccEEEEEcCCCCEEEEECCEe-eec----c--cchhhHHHHHHHHHHhcCCCCCeEEEEeCCcCHHHHH
Confidence 469999999999999999875 5899999753 222 2 2245687655555432 4678999999999999999
Q ss_pred HHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccEEEEcCCCCCCCCCCcchH
Q 038076 158 MLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAGIVVDLFSEGKVLPQLEEV 237 (345)
Q Consensus 158 l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~Ii~D~f~~~~~p~~l~t~ 237 (345)
++++.|..+|++||+||.+++.|++++.... ....++|++++++|+++++...+++||+|++|.+++......+++.
T Consensus 96 l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~---~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~ 172 (283)
T 2i7c_A 96 LCKYKSVENIDICEIDETVIEVSKIYFKNIS---CGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSDPIGPAETLFNQ 172 (283)
T ss_dssp HTTCTTCCEEEEEESCHHHHHHHHHHCTTTS---GGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECCCTTTGGGGGSSH
T ss_pred HHHcCCCCEEEEEECCHHHHHHHHHHhHHhc---cccCCCcEEEEECChHHHHHhCCCCceEEEEcCCCCCCcchhhhHH
Confidence 9987778999999999999999999985321 0123689999999999998766789999999998765545678889
Q ss_pred HHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHCCCCEEEE--EecCCCCce-EEEEe
Q 038076 238 ATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAFPGKVSWK--RMPERNGEN-FLALT 314 (345)
Q Consensus 238 ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F~~~v~~~--~~~~~~~~n-~v~~a 314 (345)
+|++.++++|+|||+++++..+...+ ....+.+.++++++|+ .+..+ .+|.-.+++ .++++
T Consensus 173 ~~l~~~~~~L~pgG~lv~~~~~~~~~---------------~~~~~~~~~~l~~~F~-~v~~~~~~vP~y~~g~~g~~~~ 236 (283)
T 2i7c_A 173 NFYEKIYNALKPNGYCVAQCESLWIH---------------VGTIKNMIGYAKKLFK-KVEYANISIPTYPCGCIGILCC 236 (283)
T ss_dssp HHHHHHHHHEEEEEEEEEECCCTTTC---------------HHHHHHHHHHHHTTCS-EEEEEEEECTTSGGGEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEECCCcccC---------------HHHHHHHHHHHHHHCC-ceEEEEEEcCCcCCCcEEEEEE
Confidence 99999999999999999997654331 1457889999999999 56544 355544455 34555
Q ss_pred CC
Q 038076 315 GL 316 (345)
Q Consensus 315 ~~ 316 (345)
++
T Consensus 237 s~ 238 (283)
T 2i7c_A 237 SK 238 (283)
T ss_dssp ES
T ss_pred eC
Confidence 43
No 9
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.93 E-value=1.5e-25 Score=213.96 Aligned_cols=212 Identities=18% Similarity=0.149 Sum_probs=164.8
Q ss_pred CceEEEEeeCCCCcEEEEEeCC-eEEEEEcCcCceEEEEecCCCcccchHHHHHhhccc--cCCCCCEEEEeecccHHHH
Q 038076 80 NFQVVTAVRSKYNDIVIVDTPK-SRMLLLDSTYNVHSIINKGIHKWTGSYWDEFVSLPA--IVPNGPIAIYGLGGGTAAH 156 (345)
Q Consensus 80 ~~~ll~~~~s~yg~I~V~e~~~-~r~L~ld~~~~~~~~~~~~p~~l~~~Y~~~~~~l~~--~~~p~~VLiIG~G~G~~~~ 156 (345)
..+++++.+|+||+|.|++++. .|.|.+|+.. |++. ...+.|.+.+..++. ..++++||+||||+|.+++
T Consensus 21 ~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~~-q~~~------~~e~~Y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~ 93 (314)
T 1uir_A 21 MERVIASGKTPFQDYFLFESKGFGKVLILDKDV-QSTE------RDEYIYHETLVHPAMLTHPEPKRVLIVGGGEGATLR 93 (314)
T ss_dssp CSEEEEEEECSSCEEEEEEETTTEEEEEETTEE-EEET------TTHHHHHHHHHHHHHHHSSCCCEEEEEECTTSHHHH
T ss_pred cceEEEEEECCCCCEEEEEcCCCcEEEEECCEE-eeee------cchhHHHHHHHHHHHhcCCCCCeEEEEcCCcCHHHH
Confidence 4579999999999999999865 5889998743 3332 124578887765553 2567899999999999999
Q ss_pred HHHHhCCCCEEEEEECCHHHHHHHHHhcCC-CCCCCCCCCCCcEEEEEcccccccccCCCcccEEEEcCCCCC---CCCC
Q 038076 157 LMLDLWPSLKLEGWEIDEILIDKVRDYFGL-SDLEKPTATGGVLQVHIGDVFSPSEDASGRYAGIVVDLFSEG---KVLP 232 (345)
Q Consensus 157 ~l~~~~p~~~v~~VEidp~vi~~A~~~f~~-~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~Ii~D~f~~~---~~p~ 232 (345)
+++++.+..+|++||+||.+++.|++++.. +. ....+++++++++|+++++...+++||+|++|.+.+. ..+.
T Consensus 94 ~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~---~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~~ 170 (314)
T 1uir_A 94 EVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQ---GAFDDPRAVLVIDDARAYLERTEERYDVVIIDLTDPVGEDNPAR 170 (314)
T ss_dssp HHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHT---TGGGCTTEEEEESCHHHHHHHCCCCEEEEEEECCCCBSTTCGGG
T ss_pred HHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcc---ccccCCceEEEEchHHHHHHhcCCCccEEEECCCCcccccCcch
Confidence 999877788999999999999999999842 10 0012689999999999998766789999999998765 4456
Q ss_pred CcchHHHHHHHHhccCCCcEEEEEecCCC-CCCccccCCCCCCCccchHHHHHHHHHHHHHCCCCEEEE--EecCCCCce
Q 038076 233 QLEEVATWLKLKDRLMPNGRFMVNCGGID-GVSDMTYGAARPKSMNDVWMHNSAIRALSEAFPGKVSWK--RMPERNGEN 309 (345)
Q Consensus 233 ~l~t~ef~~~~~~~L~pgGvlvvn~~~~~-~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F~~~v~~~--~~~~~~~~n 309 (345)
.+++.+|++.++++|+|||++++|..+.. .+ ....+.+.++++++|+ .+..+ .+|...+.+
T Consensus 171 ~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~---------------~~~~~~~~~~l~~~F~-~v~~~~~~vP~~~g~~ 234 (314)
T 1uir_A 171 LLYTVEFYRLVKAHLNPGGVMGMQTGMILLTH---------------HRVHPVVHRTVREAFR-YVRSYKNHIPGFFLNF 234 (314)
T ss_dssp GGSSHHHHHHHHHTEEEEEEEEEEEEEECC------------------CHHHHHHHHHHTTCS-EEEEEEEEEGGGTEEE
T ss_pred hccHHHHHHHHHHhcCCCcEEEEEccCccccC---------------HHHHHHHHHHHHHHCC-ceEEEEEecCCCCCeE
Confidence 67889999999999999999999976543 21 1357889999999999 55543 356554556
Q ss_pred EEEEeCCC
Q 038076 310 FLALTGLL 317 (345)
Q Consensus 310 ~v~~a~~~ 317 (345)
.++++++.
T Consensus 235 ~~~~as~~ 242 (314)
T 1uir_A 235 GFLLASDA 242 (314)
T ss_dssp EEEEEESS
T ss_pred EEEEEECC
Confidence 67777765
No 10
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.93 E-value=7.3e-25 Score=209.52 Aligned_cols=211 Identities=18% Similarity=0.190 Sum_probs=152.7
Q ss_pred ceEEEEeeCCCCcEEEEEeCC-eEEEEEcCcCceEEEEecCCCcccchHHHHHhhccc--cCCCCCEEEEeecccHHHHH
Q 038076 81 FQVVTAVRSKYNDIVIVDTPK-SRMLLLDSTYNVHSIINKGIHKWTGSYWDEFVSLPA--IVPNGPIAIYGLGGGTAAHL 157 (345)
Q Consensus 81 ~~ll~~~~s~yg~I~V~e~~~-~r~L~ld~~~~~~~~~~~~p~~l~~~Y~~~~~~l~~--~~~p~~VLiIG~G~G~~~~~ 157 (345)
.+++++.+|+||+|.|++++. .|.|.+|+.. |.+ . ...+.|.+.+..++. ..++++||+||||+|.++++
T Consensus 53 ~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~~-q~~----~--~de~~Y~e~l~~l~l~~~~~~~~VLdIG~G~G~~~~~ 125 (314)
T 2b2c_A 53 KKVLFHEKSKYQDVLVFESTTYGNVLVLDGIV-QAT----E--RDEFSYQEMLAHLPMFAHPDPKRVLIIGGGDGGILRE 125 (314)
T ss_dssp EEEEEEEECSSCEEEEEEETTTEEEEEETTEE-EEE----S--SSSSHHHHHHHHHHHHHSSSCCEEEEESCTTSHHHHH
T ss_pred ccEEEEEECCCCCEEEEEcCCCCEEEEECCEe-ecC----C--cchhHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHH
Confidence 469999999999999999865 6899999753 221 2 124568776555443 25678999999999999999
Q ss_pred HHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccEEEEcCCCCCCCCCCcchH
Q 038076 158 MLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAGIVVDLFSEGKVLPQLEEV 237 (345)
Q Consensus 158 l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~Ii~D~f~~~~~p~~l~t~ 237 (345)
++++.|..+|++|||||.+++.|++++..... ...++|++++++|+++++...+++||+|++|.+++...+..+++.
T Consensus 126 l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~---~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~t~ 202 (314)
T 2b2c_A 126 VLKHESVEKVTMCEIDEMVIDVAKKFLPGMSC---GFSHPKLDLFCGDGFEFLKNHKNEFDVIITDSSDPVGPAESLFGQ 202 (314)
T ss_dssp HTTCTTCCEEEEECSCHHHHHHHHHHCTTTSG---GGGCTTEEEECSCHHHHHHHCTTCEEEEEECCC------------
T ss_pred HHHcCCCCEEEEEECCHHHHHHHHHHHHHhcc---ccCCCCEEEEEChHHHHHHhcCCCceEEEEcCCCCCCcchhhhHH
Confidence 99877789999999999999999999853200 013689999999999998766789999999998764445568889
Q ss_pred HHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHCCCCEEEEE--ecCCCCce-EEEEe
Q 038076 238 ATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAFPGKVSWKR--MPERNGEN-FLALT 314 (345)
Q Consensus 238 ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F~~~v~~~~--~~~~~~~n-~v~~a 314 (345)
+|++.++++|+|||+++++..+.-.+ ....+.+.++++++|+ .+.++. +|....++ .++++
T Consensus 203 ~~l~~~~~~LkpgG~lv~~~~~~~~~---------------~~~~~~~~~~l~~vF~-~v~~~~~~iP~~~~g~~g~~~a 266 (314)
T 2b2c_A 203 SYYELLRDALKEDGILSSQGESVWLH---------------LPLIAHLVAFNRKIFP-AVTYAQSIVSTYPSGSMGYLIC 266 (314)
T ss_dssp -HHHHHHHHEEEEEEEEEECCCTTTC---------------HHHHHHHHHHHHHHCS-EEEEEEEECTTSGGGEEEEEEE
T ss_pred HHHHHHHhhcCCCeEEEEECCCcccC---------------HHHHHHHHHHHHHHCC-cceEEEEEecCcCCCceEEEEE
Confidence 99999999999999999987543321 1457889999999999 555443 55433344 35555
Q ss_pred CCC
Q 038076 315 GLL 317 (345)
Q Consensus 315 ~~~ 317 (345)
++.
T Consensus 267 sk~ 269 (314)
T 2b2c_A 267 AKN 269 (314)
T ss_dssp ESS
T ss_pred eCC
Confidence 544
No 11
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.93 E-value=1.2e-24 Score=206.09 Aligned_cols=213 Identities=16% Similarity=0.118 Sum_probs=157.4
Q ss_pred cCceEEEEeeCCCCcEEEEEeCC-eEEEEEcCcCceEEEEecCCCcccchHHHHHhhccc--cCCCCCEEEEeecccHHH
Q 038076 79 ENFQVVTAVRSKYNDIVIVDTPK-SRMLLLDSTYNVHSIINKGIHKWTGSYWDEFVSLPA--IVPNGPIAIYGLGGGTAA 155 (345)
Q Consensus 79 ~~~~ll~~~~s~yg~I~V~e~~~-~r~L~ld~~~~~~~~~~~~p~~l~~~Y~~~~~~l~~--~~~p~~VLiIG~G~G~~~ 155 (345)
...+++++.+|+||+|.|+++.. .|.|.+|+.. |++ .+ ..+.|.+.+..++. ..++++||+||||+|.++
T Consensus 33 ~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~-~~~----~~--de~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~ 105 (296)
T 1inl_A 33 KMNRVIYSGQSDIQRIDIFENPDLGVVFALDGIT-MTT----EK--DEFMYHEMLAHVPMFLHPNPKKVLIIGGGDGGTL 105 (296)
T ss_dssp ECSEEEEEEECSSCEEEEEEETTTEEEEEETTEE-EEE----TT--THHHHHHHHHHHHHHHSSSCCEEEEEECTTCHHH
T ss_pred ecccEEEEEECCCccEEEEEcCCCcEEEEECCEE-eec----cc--chhHHHHHHhHHHHhcCCCCCEEEEEcCCcCHHH
Confidence 34579999999999999999864 6999999752 221 21 23568776654443 246789999999999999
Q ss_pred HHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccEEEEcCCCC-CCCCCCc
Q 038076 156 HLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAGIVVDLFSE-GKVLPQL 234 (345)
Q Consensus 156 ~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~Ii~D~f~~-~~~p~~l 234 (345)
+.++++.+..+|++||+||.+++.|++++..-. ....+++++++++|+++++...+++||+|++|.+++ ...+..+
T Consensus 106 ~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~---~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~l 182 (296)
T 1inl_A 106 REVLKHDSVEKAILCEVDGLVIEAARKYLKQTS---CGFDDPRAEIVIANGAEYVRKFKNEFDVIIIDSTDPTAGQGGHL 182 (296)
T ss_dssp HHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHH---GGGGCTTEEEEESCHHHHGGGCSSCEEEEEEEC----------C
T ss_pred HHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhc---cccCCCceEEEECcHHHHHhhCCCCceEEEEcCCCcccCchhhh
Confidence 999987678999999999999999999983100 001257999999999999876678899999998876 4445668
Q ss_pred chHHHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHCCCCEEEEE--ecCC-CCceEE
Q 038076 235 EEVATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAFPGKVSWKR--MPER-NGENFL 311 (345)
Q Consensus 235 ~t~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F~~~v~~~~--~~~~-~~~n~v 311 (345)
++.++++.++++|+|||+++++..+...+ ....+.+.++++++|+ .+..+. +|.- .+.+.+
T Consensus 183 ~~~~~l~~~~~~LkpgG~lv~~~~~~~~~---------------~~~~~~~~~~l~~~F~-~v~~~~~~vp~~p~g~~~f 246 (296)
T 1inl_A 183 FTEEFYQACYDALKEDGVFSAETEDPFYD---------------IGWFKLAYRRISKVFP-ITRVYLGFMTTYPSGMWSY 246 (296)
T ss_dssp CSHHHHHHHHHHEEEEEEEEEECCCTTTT---------------HHHHHHHHHHHHHHCS-EEEEEEEECTTSTTSEEEE
T ss_pred hHHHHHHHHHHhcCCCcEEEEEccCcccC---------------HHHHHHHHHHHHHHCC-ceEEEEeecCccCCCceEE
Confidence 88999999999999999999997654321 1467889999999999 565544 4432 344556
Q ss_pred EEeCCC
Q 038076 312 ALTGLL 317 (345)
Q Consensus 312 ~~a~~~ 317 (345)
+++++.
T Consensus 247 ~~as~~ 252 (296)
T 1inl_A 247 TFASKG 252 (296)
T ss_dssp EEEESS
T ss_pred EEecCC
Confidence 667654
No 12
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.92 E-value=1e-24 Score=208.98 Aligned_cols=213 Identities=18% Similarity=0.217 Sum_probs=162.7
Q ss_pred CceEEEEeeCCCCcEEEEEeCC-eEEEEEcCcCceEEEEecCCCcccchHHHHHhhccc--cCCCCCEEEEeecccHHHH
Q 038076 80 NFQVVTAVRSKYNDIVIVDTPK-SRMLLLDSTYNVHSIINKGIHKWTGSYWDEFVSLPA--IVPNGPIAIYGLGGGTAAH 156 (345)
Q Consensus 80 ~~~ll~~~~s~yg~I~V~e~~~-~r~L~ld~~~~~~~~~~~~p~~l~~~Y~~~~~~l~~--~~~p~~VLiIG~G~G~~~~ 156 (345)
..+++++.+|+||+|.|+++.. .|.|.+|+.. + ...++ ++.|.+.+..++. ..++++||+||||+|.+++
T Consensus 60 ~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~-~----~~~~d--e~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~ 132 (321)
T 2pt6_A 60 IKKILYETKSKYQNVLVFESTTYGKVLVLDGVI-Q----LTEKD--EFAYHEMMTHVPMTVSKEPKNVLVVGGGDGGIIR 132 (321)
T ss_dssp EEEEEEEEECSSCEEEEEEESSSCEEEEETTEE-E----EETTT--HHHHHHHHHHHHHHHSSSCCEEEEEECTTCHHHH
T ss_pred cccEEEEEECCCceEEEEEcCCCcEEEEECCEe-e----eCccc--chHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHH
Confidence 3469999999999999998754 6899999853 2 12222 3567776554442 2467899999999999999
Q ss_pred HHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccEEEEcCCCCCCCCCCcch
Q 038076 157 LMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAGIVVDLFSEGKVLPQLEE 236 (345)
Q Consensus 157 ~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~Ii~D~f~~~~~p~~l~t 236 (345)
.++++.|..+|++||+||++++.|++++.... ....+++++++++|+.+++...+++||+|++|.+++...+..+++
T Consensus 133 ~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~---~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d~~~p~~~~~~l~~ 209 (321)
T 2pt6_A 133 ELCKYKSVENIDICEIDETVIEVSKIYFKNIS---CGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSDPIGPAETLFN 209 (321)
T ss_dssp HHTTCTTCCEEEEEESCHHHHHHHHHHCTTTS---GGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECCCSSSGGGGGSS
T ss_pred HHHHcCCCCEEEEEECCHHHHHHHHHHHHhhc---cccCCCcEEEEEccHHHHHhhcCCCceEEEECCcCCCCcchhhhH
Confidence 99987678999999999999999999986310 012368999999999999866678999999998765444456778
Q ss_pred HHHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHCCCCEEEEE--ecCCCCceE-EEE
Q 038076 237 VATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAFPGKVSWKR--MPERNGENF-LAL 313 (345)
Q Consensus 237 ~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F~~~v~~~~--~~~~~~~n~-v~~ 313 (345)
.++++.+++.|+|||+++++..+...+ ....+.+.++++++|+ .+..+. +|...++++ +++
T Consensus 210 ~~~l~~~~~~LkpgG~lv~~~~~~~~~---------------~~~~~~~~~~l~~~F~-~v~~~~~~vp~~~~g~w~f~~ 273 (321)
T 2pt6_A 210 QNFYEKIYNALKPNGYCVAQCESLWIH---------------VGTIKNMIGYAKKLFK-KVEYANISIPTYPCGCIGILC 273 (321)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECCTTTC---------------HHHHHHHHHHHHTTCS-EEEEEEEECTTSGGGEEEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEEcCCcccC---------------HHHHHHHHHHHHHHCC-CeEEEEEEeccccCceEEEEE
Confidence 999999999999999999987654331 1467889999999999 565443 454444455 566
Q ss_pred eCCCC
Q 038076 314 TGLLP 318 (345)
Q Consensus 314 a~~~p 318 (345)
+++.+
T Consensus 274 as~~~ 278 (321)
T 2pt6_A 274 CSKTD 278 (321)
T ss_dssp EESST
T ss_pred eeCCC
Confidence 76653
No 13
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.92 E-value=2.1e-24 Score=205.37 Aligned_cols=211 Identities=18% Similarity=0.195 Sum_probs=152.7
Q ss_pred ceEEEEeeCCCCcEEEEEeCC-eEEEEEcCcCceEEEEecCCCcccchHHHHHhhccc--cCCCCCEEEEeecccHHHHH
Q 038076 81 FQVVTAVRSKYNDIVIVDTPK-SRMLLLDSTYNVHSIINKGIHKWTGSYWDEFVSLPA--IVPNGPIAIYGLGGGTAAHL 157 (345)
Q Consensus 81 ~~ll~~~~s~yg~I~V~e~~~-~r~L~ld~~~~~~~~~~~~p~~l~~~Y~~~~~~l~~--~~~p~~VLiIG~G~G~~~~~ 157 (345)
.+++++.+|+||+|.|+++.. .|.|.+|+.. |.+ + ..+..|.+.+..++. ..++++||+||||+|.++++
T Consensus 40 ~~~l~~~~s~~q~i~v~~~~~~g~~L~ldg~~-~~~----~--~de~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~ 112 (304)
T 2o07_A 40 EQLLHHRRSRYQDILVFRSKTYGNVLVLDGVI-QCT----E--RDEFSYQEMIANLPLCSHPNPRKVLIIGGGDGGVLRE 112 (304)
T ss_dssp EEEEEEEECSSSEEEEEEESSSCEEEEETTEE-EEE----T--TTHHHHHHHHHHHHHTTSSSCCEEEEEECTTSHHHHH
T ss_pred ccEEEEEECCCcEEEEEEcCCCceEEEECCEE-Eee----c--ccchHHHHHHHHHHHhhCCCCCEEEEECCCchHHHHH
Confidence 369999999999999999864 5999999742 222 2 224567665555443 24678999999999999999
Q ss_pred HHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccEEEEcCCCCCCCCCCcchH
Q 038076 158 MLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAGIVVDLFSEGKVLPQLEEV 237 (345)
Q Consensus 158 l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~Ii~D~f~~~~~p~~l~t~ 237 (345)
++++.+..+|++||+||++++.|++++..... ...+++++++++|+++++...+++||+|++|.+.+...+.++++.
T Consensus 113 l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~---~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~ 189 (304)
T 2o07_A 113 VVKHPSVESVVQCEIDEDVIQVSKKFLPGMAI---GYSSSKLTLHVGDGFEFMKQNQDAFDVIITDSSDPMGPAESLFKE 189 (304)
T ss_dssp HTTCTTCCEEEEEESCHHHHHHHHHHCHHHHG---GGGCTTEEEEESCHHHHHHTCSSCEEEEEEECC-----------C
T ss_pred HHHcCCCCEEEEEECCHHHHHHHHHHhHHhhc---ccCCCcEEEEECcHHHHHhhCCCCceEEEECCCCCCCcchhhhHH
Confidence 99877779999999999999999999842100 012689999999999998776789999999998765444567889
Q ss_pred HHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHCCCCEEEE--EecCCC-CceEEEEe
Q 038076 238 ATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAFPGKVSWK--RMPERN-GENFLALT 314 (345)
Q Consensus 238 ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F~~~v~~~--~~~~~~-~~n~v~~a 314 (345)
+|++.++++|+|||+++++..+.-.+ ....+.+.++++++|+ .+.++ .+|.-. +...++++
T Consensus 190 ~~l~~~~~~LkpgG~lv~~~~~~~~~---------------~~~~~~~~~~l~~~f~-~v~~~~~~vP~~~~g~~g~~~a 253 (304)
T 2o07_A 190 SYYQLMKTALKEDGVLCCQGECQWLH---------------LDLIKEMRQFCQSLFP-VVAYAYCTIPTYPSGQIGFMLC 253 (304)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECTTTC---------------HHHHHHHHHHHHHHCS-EEEEEEEECTTSGGGEEEEEEE
T ss_pred HHHHHHHhccCCCeEEEEecCCcccc---------------hHHHHHHHHHHHHhCC-CceeEEEEeccccCcceEEEEE
Confidence 99999999999999999987554321 1457888999999999 55544 355432 23334566
Q ss_pred CCC
Q 038076 315 GLL 317 (345)
Q Consensus 315 ~~~ 317 (345)
++.
T Consensus 254 s~~ 256 (304)
T 2o07_A 254 SKN 256 (304)
T ss_dssp ESS
T ss_pred eCC
Confidence 544
No 14
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.91 E-value=2e-23 Score=198.33 Aligned_cols=211 Identities=16% Similarity=0.138 Sum_probs=154.7
Q ss_pred CceEEEEeeCCCCcEEEEEeC---C-eEEEEEcCcCceEEEEecCCCcccchHHHHHhhccc--cCCCCCEEEEeecccH
Q 038076 80 NFQVVTAVRSKYNDIVIVDTP---K-SRMLLLDSTYNVHSIINKGIHKWTGSYWDEFVSLPA--IVPNGPIAIYGLGGGT 153 (345)
Q Consensus 80 ~~~ll~~~~s~yg~I~V~e~~---~-~r~L~ld~~~~~~~~~~~~p~~l~~~Y~~~~~~l~~--~~~p~~VLiIG~G~G~ 153 (345)
..+++++.+|+||+|.|+++. . .|.|.+|+.. |++ . .....|.+.+..++. ..++++||+||||+|.
T Consensus 36 ~~~~l~~~~s~~q~i~v~~~~p~g~~g~~l~ldg~~-~~~----~--~de~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~ 108 (304)
T 3bwc_A 36 VEKVLYDAPTKFQHLTIFESDPKGPWGTVMALDGCI-QVT----D--YDEFVYHEVLGHTSLCSHPKPERVLIIGGGDGG 108 (304)
T ss_dssp EEEEEEEEECSSSEEEEEEECTTSSCCEEEEETTEE-EEE----T--TTHHHHHHHHHHHHHTTSSSCCEEEEEECTTSH
T ss_pred cccEEEEeECCCCCEEEEEecCCCccceEEEECCee-eee----c--ccchHHHHHHhhhhhhcCCCCCeEEEEcCCCCH
Confidence 346999999999999999987 4 5899999742 222 1 123457776655443 2567899999999999
Q ss_pred HHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCC-CCCCCCCCCCCcEEEEEccccccccc-CCCcccEEEEcCCCCCCCC
Q 038076 154 AAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGL-SDLEKPTATGGVLQVHIGDVFSPSED-ASGRYAGIVVDLFSEGKVL 231 (345)
Q Consensus 154 ~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~-~~~~~~~~~~~rv~v~~gDa~~~l~~-~~~~yD~Ii~D~f~~~~~p 231 (345)
+++.++++.+..+|++||+||.+++.|++++.. .. ...++|++++++|+.+++.. .+++||+|++|.+.+....
T Consensus 109 ~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~----~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~d~~~~~~~~ 184 (304)
T 3bwc_A 109 VLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISR----SLADPRATVRVGDGLAFVRQTPDNTYDVVIIDTTDPAGPA 184 (304)
T ss_dssp HHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHG----GGGCTTEEEEESCHHHHHHSSCTTCEEEEEEECC------
T ss_pred HHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhc----ccCCCcEEEEECcHHHHHHhccCCceeEEEECCCCccccc
Confidence 999999876778999999999999999998821 00 02368999999999999865 5789999999988765555
Q ss_pred CCcchHHHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHH-CCCCEEEEEe--cCCC-C
Q 038076 232 PQLEEVATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEA-FPGKVSWKRM--PERN-G 307 (345)
Q Consensus 232 ~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~-F~~~v~~~~~--~~~~-~ 307 (345)
..+++.+|++.+++.|+|||+++++..+...+ ....+.+.++++++ |+ .+..+.. |.-. +
T Consensus 185 ~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~---------------~~~~~~~~~~l~~~GF~-~v~~~~~~vP~yp~g 248 (304)
T 3bwc_A 185 SKLFGEAFYKDVLRILKPDGICCNQGESIWLD---------------LELIEKMSRFIRETGFA-SVQYALMHVPTYPCG 248 (304)
T ss_dssp ---CCHHHHHHHHHHEEEEEEEEEEECCTTTC---------------HHHHHHHHHHHHHHTCS-EEEEEECCCTTSTTS
T ss_pred hhhhHHHHHHHHHHhcCCCcEEEEecCCcccc---------------hHHHHHHHHHHHhCCCC-cEEEEEeecccccCc
Confidence 67889999999999999999999997654321 14578899999999 99 5665543 4332 3
Q ss_pred ceEEEEeCCC
Q 038076 308 ENFLALTGLL 317 (345)
Q Consensus 308 ~n~v~~a~~~ 317 (345)
...++++++.
T Consensus 249 ~w~f~~as~~ 258 (304)
T 3bwc_A 249 SIGTLVCSKK 258 (304)
T ss_dssp CCEEEEEESS
T ss_pred ceEEEEEeCC
Confidence 3345566654
No 15
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.91 E-value=1.1e-23 Score=196.33 Aligned_cols=196 Identities=11% Similarity=0.002 Sum_probs=150.2
Q ss_pred CceEEEEeeCCCCcEEEEEeCC-eEEEEEcCcCceEEEEecCCCcccchHHHHHhhcccc--CCCCCEEEEeecccHHHH
Q 038076 80 NFQVVTAVRSKYNDIVIVDTPK-SRMLLLDSTYNVHSIINKGIHKWTGSYWDEFVSLPAI--VPNGPIAIYGLGGGTAAH 156 (345)
Q Consensus 80 ~~~ll~~~~s~yg~I~V~e~~~-~r~L~ld~~~~~~~~~~~~p~~l~~~Y~~~~~~l~~~--~~p~~VLiIG~G~G~~~~ 156 (345)
..+++++.+|+||+|.|++++. .|.|.+|+. |++. ...+.|.+.+...+.. ..+++||+||||+|.+++
T Consensus 17 ~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~--q~~~------~d~~~y~e~l~~~~~~~~~~~~~VL~iG~G~G~~~~ 88 (262)
T 2cmg_A 17 IEAKLLDVRSEHNILEIFKSKDFGEIAMLNRQ--LLFK------NFLHIESELLAHMGGCTKKELKEVLIVDGFDLELAH 88 (262)
T ss_dssp CSEEEEEEECSSCEEEEEEETTTEEEEEETTE--EEEG------GGTHHHHHHHHHHHHTTSSCCCEEEEESSCCHHHHH
T ss_pred EeeEEEeeECCCceEEEEECCCccEEEEEcCc--cccc------chHHHHHHHHHHHhhhcCCCCCEEEEEeCCcCHHHH
Confidence 3579999999999999999876 599999985 4431 1234677666555432 467899999999999999
Q ss_pred HHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccEEEEcCCCCCCCCCCcch
Q 038076 157 LMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAGIVVDLFSEGKVLPQLEE 236 (345)
Q Consensus 157 ~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~Ii~D~f~~~~~p~~l~t 236 (345)
+++++ + .+|++||+||+|++.|+++|.... ....++|++++++|+++++ ++||+|++|..++
T Consensus 89 ~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~---~~~~~~rv~~~~~D~~~~~----~~fD~Ii~d~~dp--------- 150 (262)
T 2cmg_A 89 QLFKY-D-THIDFVQADEKILDSFISFFPHFH---EVKNNKNFTHAKQLLDLDI----KKYDLIFCLQEPD--------- 150 (262)
T ss_dssp HHTTS-S-CEEEEECSCHHHHGGGTTTSTTHH---HHHTCTTEEEESSGGGSCC----CCEEEEEESSCCC---------
T ss_pred HHHhC-C-CEEEEEECCHHHHHHHHHHHHhhc---cccCCCeEEEEechHHHHH----hhCCEEEECCCCh---------
Confidence 99987 7 999999999999999999885310 0013689999999999987 7899999996432
Q ss_pred HHHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHCCCCEEEEE--ecCCCCceEEEEe
Q 038076 237 VATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAFPGKVSWKR--MPERNGENFLALT 314 (345)
Q Consensus 237 ~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F~~~v~~~~--~~~~~~~n~v~~a 314 (345)
..|++.+++.|+|||+++++..+...+ ....+.+.++++++|+ .+..+. +|. .+.+.++++
T Consensus 151 ~~~~~~~~~~L~pgG~lv~~~~~~~~~---------------~~~~~~~~~~l~~~F~-~~~~~~~~vP~-~g~~~~~~a 213 (262)
T 2cmg_A 151 IHRIDGLKRMLKEDGVFISVAKHPLLE---------------HVSMQNALKNMGGVFS-VAMPFVAPLRI-LSNKGYIYA 213 (262)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEECTTTC---------------HHHHHHHHHHHHTTCS-EEEEECCTTCT-TCCEEEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEEcCCcccC---------------HHHHHHHHHHHHHhCC-ceEEEEEccCC-CcccEEEEe
Confidence 239999999999999999987654321 1457889999999999 555443 344 455656677
Q ss_pred CCCC
Q 038076 315 GLLP 318 (345)
Q Consensus 315 ~~~p 318 (345)
++.+
T Consensus 214 s~~~ 217 (262)
T 2cmg_A 214 SFKT 217 (262)
T ss_dssp ESSC
T ss_pred eCCC
Confidence 7653
No 16
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.89 E-value=1.8e-22 Score=194.51 Aligned_cols=212 Identities=18% Similarity=0.241 Sum_probs=159.2
Q ss_pred ceEEEEeeCCCCcEEEEEeCC-eEEEEEcCcCceEEEEecCCCcccchHHHHHhhcccc--CCCCCEEEEeecccHHHHH
Q 038076 81 FQVVTAVRSKYNDIVIVDTPK-SRMLLLDSTYNVHSIINKGIHKWTGSYWDEFVSLPAI--VPNGPIAIYGLGGGTAAHL 157 (345)
Q Consensus 81 ~~ll~~~~s~yg~I~V~e~~~-~r~L~ld~~~~~~~~~~~~p~~l~~~Y~~~~~~l~~~--~~p~~VLiIG~G~G~~~~~ 157 (345)
.+++++.+|+||+|.|.++.. .|.|.+|+.. + ... ...+.|.+.+..++.. .++++||+||||+|.+++.
T Consensus 65 ~~vl~~~~s~~q~I~v~~~~~~g~~l~ldg~~-~----~~~--~de~~y~e~L~~l~l~~~~~~~~VLdIG~G~G~~a~~ 137 (334)
T 1xj5_A 65 EKVLFQGKSDYQDVIVFQSATYGKVLVLDGVI-Q----LTE--RDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLRE 137 (334)
T ss_dssp EEEEEEEECSSCEEEEEEESSSCEEEEETTEE-E----EET--TTHHHHHHHHHHHHHTTSSCCCEEEEETCSSSHHHHH
T ss_pred eeEEEEeecCCeEEEEEEcCCCCeEEEECCEe-e----cCc--CcchHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHH
Confidence 469999999999999998854 6899999853 1 112 2245687766655532 4678999999999999999
Q ss_pred HHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc-CCCcccEEEEcCCCCCCCCCCcch
Q 038076 158 MLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED-ASGRYAGIVVDLFSEGKVLPQLEE 236 (345)
Q Consensus 158 l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~-~~~~yD~Ii~D~f~~~~~p~~l~t 236 (345)
++++.|..+|++||+||.+++.|++++..... ...+++++++++|+.+++.. .+++||+|++|.+++...+..+++
T Consensus 138 la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~---gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d~~~p~~~~~~l~~ 214 (334)
T 1xj5_A 138 VARHASIEQIDMCEIDKMVVDVSKQFFPDVAI---GYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFE 214 (334)
T ss_dssp HTTCTTCCEEEEEESCHHHHHHHHHHCHHHHG---GGGSTTEEEEESCHHHHHHTSCTTCEEEEEECCCCTTSGGGGGGS
T ss_pred HHHcCCCCEEEEEECCHHHHHHHHHHHHhhcc---ccCCCcEEEEECCHHHHHHhccCCCccEEEECCCCccCcchhhhH
Confidence 99877788999999999999999998842000 01257999999999998764 357899999998875544455778
Q ss_pred HHHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHCCCCEEE--EEecCCC-CceEEEE
Q 038076 237 VATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAFPGKVSW--KRMPERN-GENFLAL 313 (345)
Q Consensus 237 ~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F~~~v~~--~~~~~~~-~~n~v~~ 313 (345)
.++++.+++.|+|||+++++..+.-.+ ....+.+.++++++|++.+.. ..+|.-. +...+++
T Consensus 215 ~~~l~~~~~~LkpgG~lv~~~~~~~~~---------------~~~~~~~~~~l~~~F~~~~~~~~~~vP~y~~g~~gf~~ 279 (334)
T 1xj5_A 215 KPFFQSVARALRPGGVVCTQAESLWLH---------------MDIIEDIVSNCREIFKGSVNYAWTSVPTYPSGVIGFML 279 (334)
T ss_dssp HHHHHHHHHHEEEEEEEEEECCCTTTC---------------HHHHHHHHHHHHHHCSSCEEEEEEECTTSGGGEEEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEecCCcccc---------------HHHHHHHHHHHHHhCccccceEEEeCCcccCCceEEEE
Confidence 999999999999999999986544331 145678889999999965543 2455433 3344666
Q ss_pred eCCC
Q 038076 314 TGLL 317 (345)
Q Consensus 314 a~~~ 317 (345)
+++.
T Consensus 280 as~~ 283 (334)
T 1xj5_A 280 CSTE 283 (334)
T ss_dssp EECS
T ss_pred cccC
Confidence 6653
No 17
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.51 E-value=2e-14 Score=131.06 Aligned_cols=121 Identities=14% Similarity=0.068 Sum_probs=93.3
Q ss_pred cchHHHHHhhccccCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEc
Q 038076 125 TGSYWDEFVSLPAIVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIG 204 (345)
Q Consensus 125 ~~~Y~~~~~~l~~~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~g 204 (345)
...|.+.+.... ..+..+||+||||+|..+.++.++.| .++++||++|.|++.|++++... ..+++++.+
T Consensus 46 e~~~m~~~a~~~-~~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~--------~~~~~~~~~ 115 (236)
T 3orh_A 46 ETPYMHALAAAA-SSKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQ--------THKVIPLKG 115 (236)
T ss_dssp GHHHHHHHHHHH-TTTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGC--------SSEEEEEES
T ss_pred HHHHHHHHHHhh-ccCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhC--------CCceEEEee
Confidence 344555443221 24568999999999999999987655 68999999999999999988532 468999999
Q ss_pred cccccccc-CCCcccEEEEcCCCCCCCCCCcc-hHHHHHHHHhccCCCcEEEE
Q 038076 205 DVFSPSED-ASGRYAGIVVDLFSEGKVLPQLE-EVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 205 Da~~~l~~-~~~~yD~Ii~D~f~~~~~p~~l~-t~ef~~~~~~~L~pgGvlvv 255 (345)
|+...+.. .+++||.|+.|.+.......+.. ...+++++++.|||||+|++
T Consensus 116 ~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 116 LWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp CHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred hHHhhcccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEE
Confidence 99887644 56789999999876544333433 45688999999999999976
No 18
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.50 E-value=2.4e-14 Score=129.57 Aligned_cols=102 Identities=8% Similarity=0.015 Sum_probs=86.0
Q ss_pred CEEEEeecccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccC-CCcccEE
Q 038076 143 PIAIYGLGGGTAAHLMLDLWP-SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDA-SGRYAGI 220 (345)
Q Consensus 143 ~VLiIG~G~G~~~~~l~~~~p-~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~-~~~yD~I 220 (345)
+||+||||+|..+.++++..| +.+|++||+|+++++.|++++..... .+++++++.+|+.+++... +++||+|
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-----~~~~i~~~~gda~~~l~~~~~~~fD~V 133 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGY-----SPSRVRFLLSRPLDVMSRLANDSYQLV 133 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTC-----CGGGEEEECSCHHHHGGGSCTTCEEEE
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CcCcEEEEEcCHHHHHHHhcCCCcCeE
Confidence 899999999999999998764 79999999999999999999854321 1268999999999988664 6899999
Q ss_pred EEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 221 VVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 221 i~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
++|.... ...++++.+.+.|+|||+++++
T Consensus 134 ~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 134 FGQVSPM-------DLKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp EECCCTT-------THHHHHHHHHHHEEEEEEEEET
T ss_pred EEcCcHH-------HHHHHHHHHHHHcCCCcEEEEe
Confidence 9986432 2357999999999999999984
No 19
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.49 E-value=2.9e-14 Score=134.67 Aligned_cols=146 Identities=11% Similarity=0.014 Sum_probs=102.6
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
+.++.+||+||||+|.++..++...++.+|++||+||++++.|++++.... -.+++++.+|+.++ .+++|
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~g-------l~~v~~v~gDa~~l---~d~~F 189 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLG-------VDGVNVITGDETVI---DGLEF 189 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHT-------CCSEEEEESCGGGG---GGCCC
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcC-------CCCeEEEECchhhC---CCCCc
Confidence 467899999999988666555555678999999999999999999874221 15899999999986 26889
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHCCCCE
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAFPGKV 297 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F~~~v 297 (345)
|+|+++... + ...++++++.+.|+|||+++++....... .+...+.....+.|. +
T Consensus 190 DvV~~~a~~----~---d~~~~l~el~r~LkPGG~Lvv~~~~~~r~----------------~l~~~v~~~~~~gf~--~ 244 (298)
T 3fpf_A 190 DVLMVAALA----E---PKRRVFRNIHRYVDTETRIIYRTYTGMRA----------------ILYAPVSDDDITGFR--R 244 (298)
T ss_dssp SEEEECTTC----S---CHHHHHHHHHHHCCTTCEEEEEECCGGGG----------------GSSCCCCTGGGTTEE--E
T ss_pred CEEEECCCc----c---CHHHHHHHHHHHcCCCcEEEEEcCcchhh----------------hccccCChhhhhhhh--h
Confidence 999986532 1 34689999999999999999887543210 000111112334565 2
Q ss_pred EEEEecCCCCceEEEEeCCCC
Q 038076 298 SWKRMPERNGENFLALTGLLP 318 (345)
Q Consensus 298 ~~~~~~~~~~~n~v~~a~~~p 318 (345)
.....|.....|.++++.+.+
T Consensus 245 ~~~~~p~~~v~N~vv~a~k~~ 265 (298)
T 3fpf_A 245 AGVVLPSGKVNNTSVLVFKCP 265 (298)
T ss_dssp EEEECCCTTCCCEEEEEEECC
T ss_pred eeEECCCCCcCcEEEEEEccC
Confidence 333456665678787875543
No 20
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.48 E-value=1.1e-13 Score=125.43 Aligned_cols=105 Identities=12% Similarity=0.125 Sum_probs=89.1
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccc-cCCCcc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSE-DASGRY 217 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~-~~~~~y 217 (345)
.++++||+||||+|..+..+++..|+.+|++||++|.+++.|++++..... .++++++.+|+.+++. ..+++|
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~v~~~~~d~~~~~~~~~~~~f 143 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHF------ENQVRIIEGNALEQFENVNDKVY 143 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTC------TTTEEEEESCGGGCHHHHTTSCE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC------CCcEEEEECCHHHHHHhhccCCc
Confidence 367899999999999999999877889999999999999999998853321 3589999999999876 557899
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
|+|++|.... ...++++.+.+.|+|||+++++
T Consensus 144 D~V~~~~~~~-------~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 144 DMIFIDAAKA-------QSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp EEEEEETTSS-------SHHHHHHHHGGGEEEEEEEEEE
T ss_pred cEEEEcCcHH-------HHHHHHHHHHHhcCCCeEEEEe
Confidence 9999985322 2467999999999999999884
No 21
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.47 E-value=7.3e-14 Score=128.44 Aligned_cols=105 Identities=13% Similarity=0.077 Sum_probs=88.1
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccC----
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWP-SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDA---- 213 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p-~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~---- 213 (345)
.++++||+||||+|..+..+++..| +.+|+++|+++.+++.|++++.... .+++++++.+|+.+++...
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g------~~~~i~~~~gda~~~l~~l~~~~ 151 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAG------VDHKIDFREGPALPVLDEMIKDE 151 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTT------CGGGEEEEESCHHHHHHHHHHSG
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC------CCCCeEEEECCHHHHHHHHHhcc
Confidence 4678999999999999999998877 7899999999999999999885332 1468999999999876542
Q ss_pred --CCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 214 --SGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 214 --~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
.++||+|++|.... ...++++.+.+.|+|||++++.
T Consensus 152 ~~~~~fD~V~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 152 KNHGSYDFIFVDADKD-------NYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp GGTTCBSEEEECSCST-------THHHHHHHHHHHBCTTCCEEEE
T ss_pred CCCCCEEEEEEcCchH-------HHHHHHHHHHHhCCCCeEEEEe
Confidence 57899999986422 2367999999999999999875
No 22
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.46 E-value=1.9e-13 Score=125.33 Aligned_cols=107 Identities=15% Similarity=0.077 Sum_probs=88.5
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCC--C
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWP-SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDAS--G 215 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p-~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~--~ 215 (345)
.++++||+||||+|..+..+++..| +.+|++||++|.+++.|++++..... .++++++.+|+.+++.... +
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~------~~~v~~~~~d~~~~l~~~~~~~ 135 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV------DQRVTLREGPALQSLESLGECP 135 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC------TTTEEEEESCHHHHHHTCCSCC
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC------CCcEEEEEcCHHHHHHhcCCCC
Confidence 3678999999999999999998877 79999999999999999998843321 3589999999999776543 4
Q ss_pred cccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 216 RYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
+||+|++|.... ...++++.+.+.|+|||+++++-.
T Consensus 136 ~fD~V~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 136 AFDLIFIDADKP-------NNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp CCSEEEECSCGG-------GHHHHHHHHHHTCCTTCEEEEECC
T ss_pred CeEEEEECCchH-------HHHHHHHHHHHhcCCCeEEEEeCC
Confidence 899999986321 235799999999999999988633
No 23
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.45 E-value=7.6e-13 Score=113.50 Aligned_cols=108 Identities=16% Similarity=0.083 Sum_probs=87.6
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||++|||+|.++..+.+.+|+.+|+++|+++.+++.|++.+..... ..++ ++.+|+.+.+....++||
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~-~~~~d~~~~~~~~~~~~D 96 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGV------SDRI-AVQQGAPRAFDDVPDNPD 96 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTC------TTSE-EEECCTTGGGGGCCSCCS
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCC------CCCE-EEecchHhhhhccCCCCC
Confidence 456799999999999999999888889999999999999999998753321 3478 888999877765558999
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
+|+++.... + .++++.+.+.|+|||.++++....+
T Consensus 97 ~i~~~~~~~-----~---~~~l~~~~~~L~~gG~l~~~~~~~~ 131 (178)
T 3hm2_A 97 VIFIGGGLT-----A---PGVFAAAWKRLPVGGRLVANAVTVE 131 (178)
T ss_dssp EEEECC-TT-----C---TTHHHHHHHTCCTTCEEEEEECSHH
T ss_pred EEEECCccc-----H---HHHHHHHHHhcCCCCEEEEEeeccc
Confidence 999854221 1 5789999999999999998876543
No 24
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.44 E-value=1e-13 Score=126.36 Aligned_cols=105 Identities=13% Similarity=0.053 Sum_probs=88.1
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccC----
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWP-SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDA---- 213 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p-~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~---- 213 (345)
.++++||+||||+|..+.++++..| +.+|+++|+||.+++.|++++.... ..++++++.+|+.+++...
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g------~~~~i~~~~gda~~~l~~l~~~~ 142 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAG------VEHKINFIESDAMLALDNLLQGQ 142 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT------CGGGEEEEESCHHHHHHHHHHST
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC------CCCcEEEEEcCHHHHHHHHHhcc
Confidence 4678999999999999999998876 7999999999999999999985332 1458999999999876542
Q ss_pred --CCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 214 --SGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 214 --~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
.++||+|++|.... ...++++.+.+.|+|||++++.
T Consensus 143 ~~~~~fD~I~~d~~~~-------~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 143 ESEGSYDFGFVDADKP-------NYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp TCTTCEEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCcCEEEECCchH-------HHHHHHHHHHHhcCCCeEEEEe
Confidence 57899999985321 3468999999999999999884
No 25
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.44 E-value=1.4e-13 Score=123.29 Aligned_cols=107 Identities=13% Similarity=0.043 Sum_probs=87.9
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccC----
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWP-SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDA---- 213 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p-~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~---- 213 (345)
.++++||+||||+|..+.++++..| +.+|+++|++|.+++.|++++.... ..++++++.+|+.+++...
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~------~~~~v~~~~~d~~~~~~~~~~~~ 130 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERAN------LNDRVEVRTGLALDSLQQIENEK 130 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTT------CTTTEEEEESCHHHHHHHHHHTT
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC------CCCcEEEEEcCHHHHHHHHHhcC
Confidence 4678999999999999999998877 7899999999999999999885332 1457999999998876431
Q ss_pred CCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 214 SGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 214 ~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
.++||+|++|.... ...++++.+.+.|+|||+++++-.
T Consensus 131 ~~~fD~v~~d~~~~-------~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 131 YEPFDFIFIDADKQ-------NNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp CCCCSEEEECSCGG-------GHHHHHHHHHHTCCTTCEEEEESC
T ss_pred CCCcCEEEEcCCcH-------HHHHHHHHHHHhcCCCcEEEEeCC
Confidence 26799999986421 336899999999999999988633
No 26
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.42 E-value=2.6e-13 Score=121.83 Aligned_cols=110 Identities=13% Similarity=0.057 Sum_probs=86.2
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCC---
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWP-SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDAS--- 214 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p-~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~--- 214 (345)
.++++||+||||+|..+..+++..+ +.+|++||++|.+++.|++++..... .++++++.+|+.+++....
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~v~~~~~d~~~~l~~~~~~~ 130 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL------QDKVTILNGASQDLIPQLKKKY 130 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC------GGGEEEEESCHHHHGGGTTTTS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC------CCceEEEECCHHHHHHHHHHhc
Confidence 3678999999999999999998654 78999999999999999998753221 3579999999988876544
Q ss_pred --CcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 215 --GRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 215 --~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
++||+|++|...... ....++++.+ +.|+|||++++.-..
T Consensus 131 ~~~~fD~V~~d~~~~~~----~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 131 DVDTLDMVFLDHWKDRY----LPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp CCCCCSEEEECSCGGGH----HHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred CCCceEEEEEcCCcccc----hHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 689999998633211 1223567777 999999999875443
No 27
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.42 E-value=2.5e-13 Score=120.73 Aligned_cols=104 Identities=12% Similarity=0.098 Sum_probs=86.7
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWP-SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p-~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
.++++||+||||+|..+..+++..| +.+|++||+++.+++.|++++.... ..++++++.+|+.+++...++ |
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~------~~~~v~~~~~d~~~~~~~~~~-f 127 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNG------LIDRVELQVGDPLGIAAGQRD-I 127 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHS------GGGGEEEEESCHHHHHTTCCS-E
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC------CCceEEEEEecHHHHhccCCC-C
Confidence 3578999999999999999998877 7899999999999999998874222 135799999999987765556 9
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
|+|++|... ....++++.+.+.|+|||++++.
T Consensus 128 D~v~~~~~~-------~~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 128 DILFMDCDV-------FNGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp EEEEEETTT-------SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred CEEEEcCCh-------hhhHHHHHHHHHhcCCCeEEEEE
Confidence 999998432 13468999999999999999874
No 28
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.42 E-value=1.3e-12 Score=115.40 Aligned_cols=106 Identities=11% Similarity=0.004 Sum_probs=88.2
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+||+||||+|.++..+.+..|..+|+++|++|.+++.|++.+.... -++++++.+|+.+.+.. .++||
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-------~~~v~~~~~d~~~~~~~-~~~~D 110 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFV-------ARNVTLVEAFAPEGLDD-LPDPD 110 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHT-------CTTEEEEECCTTTTCTT-SCCCS
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhC-------CCcEEEEeCChhhhhhc-CCCCC
Confidence 45679999999999999999998888999999999999999998874221 25799999999887643 36799
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+|+++.... ...++++.+.+.|+|||.+++....
T Consensus 111 ~i~~~~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 111 RVFIGGSGG-------MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp EEEESCCTT-------CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred EEEECCCCc-------CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 999875332 3468999999999999999987654
No 29
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.41 E-value=5.1e-14 Score=129.11 Aligned_cols=105 Identities=12% Similarity=0.142 Sum_probs=88.1
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccC----
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWP-SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDA---- 213 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p-~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~---- 213 (345)
.++++||+||||+|..+.++++..| +.+|++||++|.+++.|++++.... ..++++++.+|+.+++...
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g------~~~~i~~~~gda~~~l~~~~~~~ 132 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAK------QEHKIKLRLGPALDTLHSLLNEG 132 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTT------CTTTEEEEESCHHHHHHHHHHHH
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC------CCCcEEEEEcCHHHHHHHHhhcc
Confidence 4678999999999999999998775 7899999999999999999885332 1468999999999987643
Q ss_pred -CCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 214 -SGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 214 -~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
.++||+|++|... -...++++.+.+.|+|||++++.
T Consensus 133 ~~~~fD~V~~d~~~-------~~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 133 GEHQFDFIFIDADK-------TNYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp CSSCEEEEEEESCG-------GGHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCEeEEEEcCCh-------HHhHHHHHHHHHhcCCCeEEEEE
Confidence 5789999998642 13457899999999999999985
No 30
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.41 E-value=2.7e-13 Score=121.37 Aligned_cols=107 Identities=15% Similarity=0.089 Sum_probs=88.0
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCC---
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWP-SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDAS--- 214 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p-~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~--- 214 (345)
.++++||+||||+|..+..+++..| +.+|+++|+++.+++.|++++..... .++++++++|+.+++....
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~v~~~~~d~~~~~~~~~~~~ 136 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL------SDKIGLRLSPAKDTLAELIHAG 136 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC------TTTEEEEESCHHHHHHHHHTTT
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC------CCceEEEeCCHHHHHHHhhhcc
Confidence 3678999999999999999998877 79999999999999999998853321 4579999999988765422
Q ss_pred --CcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 215 --GRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 215 --~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
++||+|++|... -...++++.+.+.|+|||++++.-.
T Consensus 137 ~~~~fD~v~~~~~~-------~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 137 QAWQYDLIYIDADK-------ANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp CTTCEEEEEECSCG-------GGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred CCCCccEEEECCCH-------HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 789999998632 1346799999999999999988633
No 31
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.41 E-value=2.7e-12 Score=118.68 Aligned_cols=113 Identities=12% Similarity=0.084 Sum_probs=87.8
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCC---CCCCCCCCCCCcEEEEEcccccccc----
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGL---SDLEKPTATGGVLQVHIGDVFSPSE---- 211 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~---~~~~~~~~~~~rv~v~~gDa~~~l~---- 211 (345)
.+..+||+||||+|.++..+.+..|+.+|++||++|.+++.|++++.. ... ..+++++.+|..++..
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l------~~~v~~~~~D~~~~~~~~~~ 108 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAF------SARIEVLEADVTLRAKARVE 108 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTT------GGGEEEEECCTTCCHHHHHH
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCC------cceEEEEeCCHHHHhhhhhh
Confidence 456799999999999999999988889999999999999999999865 332 3579999999998743
Q ss_pred --cCCCcccEEEEcCCCCCC-----------C---CCCcchHHHHHHHHhccCCCcEEEEEe
Q 038076 212 --DASGRYAGIVVDLFSEGK-----------V---LPQLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 212 --~~~~~yD~Ii~D~f~~~~-----------~---p~~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
-.+++||+|+++..-... . .......++++.+.+.|+|||.+++-.
T Consensus 109 ~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 109 AGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp TTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 135789999997322110 0 001124678999999999999998754
No 32
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.40 E-value=2.6e-12 Score=111.01 Aligned_cols=131 Identities=17% Similarity=0.140 Sum_probs=99.7
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+||++|||+|.++..+.+. +.+++++|++|.+++.|++.+..... .+.+++++.+|+.+.+. +++||
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~d~~~~~~--~~~~D 121 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNL-----DNYDIRVVHSDLYENVK--DRKYN 121 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTC-----TTSCEEEEECSTTTTCT--TSCEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCC-----CccceEEEECchhcccc--cCCce
Confidence 46679999999999999998876 78999999999999999998743221 12259999999988653 57899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHCCCCEE
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAFPGKVS 298 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F~~~v~ 298 (345)
+|+++..-.. ..-...++++.+.+.|+|||.+++....... ...+.+.+++.|. .+.
T Consensus 122 ~v~~~~~~~~---~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~-------------------~~~~~~~l~~~~~-~~~ 178 (194)
T 1dus_A 122 KIITNPPIRA---GKEVLHRIIEEGKELLKDNGEIWVVIQTKQG-------------------AKSLAKYMKDVFG-NVE 178 (194)
T ss_dssp EEEECCCSTT---CHHHHHHHHHHHHHHEEEEEEEEEEEESTHH-------------------HHHHHHHHHHHHS-CCE
T ss_pred EEEECCCccc---chhHHHHHHHHHHHHcCCCCEEEEEECCCCC-------------------hHHHHHHHHHHhc-ceE
Confidence 9998642211 0113357899999999999999998875542 4457777888887 555
Q ss_pred EEE
Q 038076 299 WKR 301 (345)
Q Consensus 299 ~~~ 301 (345)
+..
T Consensus 179 ~~~ 181 (194)
T 1dus_A 179 TVT 181 (194)
T ss_dssp EEE
T ss_pred EEe
Confidence 443
No 33
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.38 E-value=8.4e-12 Score=111.92 Aligned_cols=152 Identities=13% Similarity=0.014 Sum_probs=103.5
Q ss_pred cCCCCCEEEEeec-ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCc
Q 038076 138 IVPNGPIAIYGLG-GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGR 216 (345)
Q Consensus 138 ~~~p~~VLiIG~G-~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~ 216 (345)
+.+..+||++||| +|.++..+.+.. +.+|+++|+|+.+++.|+++..... .+++++.+|+..+..-.+++
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~--------~~v~~~~~d~~~~~~~~~~~ 123 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNN--------SNVRLVKSNGGIIKGVVEGT 123 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTT--------CCCEEEECSSCSSTTTCCSC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhC--------CCcEEEeCCchhhhhcccCc
Confidence 3567899999999 999999998865 6899999999999999999875332 27999999986543334589
Q ss_pred ccEEEEcCCCCCCCC---------------CCcchHHHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHH
Q 038076 217 YAGIVVDLFSEGKVL---------------PQLEEVATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWM 281 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p---------------~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~ 281 (345)
||+|+++..-..... ......++++.+.+.|+|||.+++.+.... ..
T Consensus 124 fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~------------------~~ 185 (230)
T 3evz_A 124 FDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE------------------KL 185 (230)
T ss_dssp EEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH------------------HH
T ss_pred eeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH------------------hH
Confidence 999999743211000 001126899999999999999998765432 23
Q ss_pred HHHHHHHHHHHCCCCEEEEEecCC-CCceEEEEeCCC
Q 038076 282 HNSAIRALSEAFPGKVSWKRMPER-NGENFLALTGLL 317 (345)
Q Consensus 282 ~~~~~~~l~~~F~~~v~~~~~~~~-~~~n~v~~a~~~ 317 (345)
...+.+.+++..- .+...+...+ .-..++.+..+.
T Consensus 186 ~~~~~~~l~~~g~-~~~~~~~~~g~~~~~~l~f~~~~ 221 (230)
T 3evz_A 186 LNVIKERGIKLGY-SVKDIKFKVGTRWRHSLIFFKGI 221 (230)
T ss_dssp HHHHHHHHHHTTC-EEEEEEECCCC-CEEEEEEECCC
T ss_pred HHHHHHHHHHcCC-ceEEEEecCCCeEEEEEEEeccc
Confidence 4566666776632 3443344333 223345555443
No 34
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.38 E-value=2.6e-12 Score=114.51 Aligned_cols=112 Identities=14% Similarity=0.053 Sum_probs=88.2
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccc-cCCCccc
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSE-DASGRYA 218 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~-~~~~~yD 218 (345)
+..+||+||||+|.++..+.+..|+.++++||+++.+++.|+++..... -++++++.+|+.++.. -.+++||
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~-------~~~v~~~~~d~~~~~~~~~~~~~D 113 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVG-------VPNIKLLWVDGSDLTDYFEDGEID 113 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC-------CSSEEEEECCSSCGGGTSCTTCCS
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcC-------CCCEEEEeCCHHHHHhhcCCCCCC
Confidence 4678999999999999999999999999999999999999998874221 2579999999998532 2457899
Q ss_pred EEEEcCCCCCCC----CCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 219 GIVVDLFSEGKV----LPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 219 ~Ii~D~f~~~~~----p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
+|+++..++..- +..+...++++.+.+.|+|||++++...
T Consensus 114 ~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 114 RLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred EEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 999985433210 1113457899999999999999988653
No 35
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.38 E-value=3.6e-12 Score=111.64 Aligned_cols=118 Identities=9% Similarity=0.021 Sum_probs=91.0
Q ss_pred CCCCCEEEEeecccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLW-PSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~-p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
.+..+||++|||+|..+..+++.. |..+++++|+++.+++.|++.+.... ..++++++.+|+.++....+++|
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~------~~~~v~~~~~d~~~~~~~~~~~f 94 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLN------LIDRVTLIKDGHQNMDKYIDCPV 94 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTT------CGGGEEEECSCGGGGGGTCCSCE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC------CCCCeEEEECCHHHHhhhccCCc
Confidence 456799999999999999998874 56799999999999999999875322 13689999999988765556899
Q ss_pred cEEEEcCCC-CCC---C-CCCcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 218 AGIVVDLFS-EGK---V-LPQLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 218 D~Ii~D~f~-~~~---~-p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
|+|+++... +.. . ...-...++++.+.+.|+|||.+++..+....
T Consensus 95 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~ 144 (197)
T 3eey_A 95 KAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGD 144 (197)
T ss_dssp EEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTT
T ss_pred eEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCC
Confidence 999998522 100 0 01112357999999999999999988765443
No 36
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.37 E-value=2.9e-12 Score=118.88 Aligned_cols=108 Identities=18% Similarity=0.152 Sum_probs=83.8
Q ss_pred CCCCCEEEEeecccHHHHHHHHhC--CCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLW--PSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGR 216 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~--p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~ 216 (345)
.+..+||+||||+|..+..+++.. ++.+|++||++|.|++.|++++.... ...+++++++|+.++ +.+.
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~------~~~~v~~~~~D~~~~---~~~~ 139 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK------APTPVDVIEGDIRDI---AIEN 139 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC------CSSCEEEEESCTTTC---CCCS
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc------cCceEEEeecccccc---cccc
Confidence 566899999999999999998864 56899999999999999999874322 246899999999885 3467
Q ss_pred ccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEe
Q 038076 217 YAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
||+|++-..- ..+++ ....++++++++.|+|||++++.-
T Consensus 140 ~d~v~~~~~l-~~~~~-~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 140 ASMVVLNFTL-QFLEP-SERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp EEEEEEESCG-GGSCH-HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccceeeeee-eecCc-hhHhHHHHHHHHHcCCCcEEEEEe
Confidence 9999874311 11221 123468999999999999988753
No 37
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.36 E-value=1.6e-12 Score=112.69 Aligned_cols=115 Identities=13% Similarity=0.120 Sum_probs=84.0
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+||++|||+|..+..+.+. +.+|++||++|.+++.|++.+.... -++++++.+|........+++||
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~-------~~~v~~~~~~~~~l~~~~~~~fD 91 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLG-------IENTELILDGHENLDHYVREPIR 91 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHT-------CCCEEEEESCGGGGGGTCCSCEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcC-------CCcEEEEeCcHHHHHhhccCCcC
Confidence 46789999999999999999876 7899999999999999999874221 25799999887774333467899
Q ss_pred EEEEcC-CCCCC---CC-CCcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 219 GIVVDL-FSEGK---VL-PQLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 219 ~Ii~D~-f~~~~---~p-~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
+|+++. +-+.. .. ..-...++++.+.+.|+|||.+++.++....
T Consensus 92 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 140 (185)
T 3mti_A 92 AAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHD 140 (185)
T ss_dssp EEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC----
T ss_pred EEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCC
Confidence 999874 21110 00 1123457889999999999999988775543
No 38
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.36 E-value=1.2e-12 Score=118.16 Aligned_cols=105 Identities=14% Similarity=0.132 Sum_probs=88.2
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccC--CCc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDA--SGR 216 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~--~~~ 216 (345)
.++.+||+||||+|..+..+.+..|+.+|+++|+++.+++.|++++.... ..++++++.+|+.+++... +++
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~------~~~~v~~~~~d~~~~~~~~~~~~~ 126 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALG------LESRIELLFGDALQLGEKLELYPL 126 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTT------CTTTEEEECSCGGGSHHHHTTSCC
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcC------CCCcEEEEECCHHHHHHhcccCCC
Confidence 35789999999999999999998888999999999999999999874322 1357999999999876543 578
Q ss_pred ccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 217 YAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
||+|++|.... ...++++.+.+.|+|||++++.
T Consensus 127 fD~I~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 127 FDVLFIDAAKG-------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp EEEEEEEGGGS-------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred ccEEEECCCHH-------HHHHHHHHHHHHcCCCeEEEEE
Confidence 99999976432 3468999999999999999986
No 39
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.36 E-value=7.1e-13 Score=114.19 Aligned_cols=112 Identities=13% Similarity=-0.021 Sum_probs=88.6
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||++|||+|..+..+.+. +..+|+++|+|+.+++.|++++..... .++++++.+|+.+++...+++||
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~fD 102 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKA------ENRFTLLKMEAERAIDCLTGRFD 102 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTC------GGGEEEECSCHHHHHHHBCSCEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCC------CCceEEEECcHHHhHHhhcCCCC
Confidence 45789999999999999998876 667999999999999999998854321 35799999999997665567899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHH--hccCCCcEEEEEecCCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLK--DRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~--~~L~pgGvlvvn~~~~~~ 262 (345)
+|++|..-. .....++++.+. +.|+|||++++.+.....
T Consensus 103 ~i~~~~~~~-----~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 103 LVFLDPPYA-----KETIVATIEALAAKNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp EEEECCSSH-----HHHHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred EEEECCCCC-----cchHHHHHHHHHhCCCcCCCcEEEEEECCccc
Confidence 999973210 112356777776 899999999998876554
No 40
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.36 E-value=6.4e-12 Score=112.83 Aligned_cols=110 Identities=14% Similarity=0.141 Sum_probs=87.5
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|..+..+.+..|+.+++++|+++.+++.|++.+.. .++++++.+|+.+... .++||
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~---------~~~~~~~~~d~~~~~~--~~~fD 111 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRG---------NLKVKYIEADYSKYDF--EEKYD 111 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCS---------CTTEEEEESCTTTCCC--CSCEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhcc---------CCCEEEEeCchhccCC--CCCce
Confidence 467899999999999999999998899999999999999999998752 2389999999988643 38999
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
+|++...-. .. +.....++++++++.|+|||.+++......
T Consensus 112 ~v~~~~~l~-~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 112 MVVSALSIH-HL-EDEDKKELYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp EEEEESCGG-GS-CHHHHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred EEEEeCccc-cC-CHHHHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 999853111 11 111223589999999999999998765443
No 41
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.35 E-value=7.1e-13 Score=118.92 Aligned_cols=105 Identities=16% Similarity=0.154 Sum_probs=86.4
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccC---C
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWP-SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDA---S 214 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p-~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~---~ 214 (345)
.++++||+||||+|..+..+++..| +.+|+++|++|.+++.|++++.... ..++++++.+|+.+.+... .
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g------~~~~i~~~~~d~~~~~~~~~~~~ 141 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAE------AEHKIDLRLKPALETLDELLAAG 141 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTT------CTTTEEEEESCHHHHHHHHHHTT
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC------CCCeEEEEEcCHHHHHHHHHhcC
Confidence 4678999999999999999998766 6899999999999999999885322 1368999999998876432 1
Q ss_pred --CcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 215 --GRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 215 --~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
++||+|++|.... ...++++.+.+.|+|||++++.
T Consensus 142 ~~~~~D~v~~d~~~~-------~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 142 EAGTFDVAVVDADKE-------NCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp CTTCEEEEEECSCST-------THHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCccEEEECCCHH-------HHHHHHHHHHHHcCCCeEEEEE
Confidence 7899999986421 2367999999999999999874
No 42
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.35 E-value=1.9e-12 Score=116.81 Aligned_cols=112 Identities=13% Similarity=0.038 Sum_probs=89.6
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc--CCCcc
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED--ASGRY 217 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~--~~~~y 217 (345)
+..+||+||||+|.++..+.+..|+.+|++||+++.+++.|+++..... -++++++.+|+.+++.. .+++|
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~-------l~nv~~~~~Da~~~l~~~~~~~~~ 106 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEG-------LSNLRVMCHDAVEVLHKMIPDNSL 106 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTT-------CSSEEEECSCHHHHHHHHSCTTCE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhC-------CCcEEEEECCHHHHHHHHcCCCCh
Confidence 4578999999999999999999999999999999999999998864222 24699999999997652 57899
Q ss_pred cEEEEcCCCCCCC----CCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 218 AGIVVDLFSEGKV----LPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 218 D~Ii~D~f~~~~~----p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
|.|++...++..- ...+...++++.+.+.|+|||++.+.+.
T Consensus 107 d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 107 RMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp EEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred heEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 9999864443211 1123456799999999999999987654
No 43
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.34 E-value=4.5e-12 Score=110.70 Aligned_cols=113 Identities=10% Similarity=-0.085 Sum_probs=87.9
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc-CCCcc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED-ASGRY 217 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~-~~~~y 217 (345)
.++.+||++|||+|.++..+++. +..+|++||+|+.+++.|++++.... -++++++++|+.+++.. .+++|
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~-------~~~v~~~~~d~~~~~~~~~~~~f 114 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALG-------LSGATLRRGAVAAVVAAGTTSPV 114 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHT-------CSCEEEEESCHHHHHHHCCSSCC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcC-------CCceEEEEccHHHHHhhccCCCc
Confidence 35689999999999999987764 56799999999999999999874322 25799999999998653 36899
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHh--ccCCCcEEEEEecCCCC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKD--RLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~--~L~pgGvlvvn~~~~~~ 262 (345)
|+|++|..-.. ..-...++++.+.+ .|+|||++++.......
T Consensus 115 D~i~~~~p~~~---~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 115 DLVLADPPYNV---DSADVDAILAALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp SEEEECCCTTS---CHHHHHHHHHHHHHSSSCCTTCEEEEEEETTSC
T ss_pred cEEEECCCCCc---chhhHHHHHHHHHhcCccCCCeEEEEEecCCCC
Confidence 99999743211 00124578888988 99999999998765543
No 44
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.33 E-value=5.5e-12 Score=116.02 Aligned_cols=111 Identities=16% Similarity=0.058 Sum_probs=85.5
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc-CCCccc
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED-ASGRYA 218 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~-~~~~yD 218 (345)
++.+||++|||+|.++..+.+..+. +|++||++|.+++.|++++..... ..+++++.+|+.++... ..++||
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~------~~~v~~~~~D~~~~~~~~~~~~fD 121 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQL------EDQIEIIEYDLKKITDLIPKERAD 121 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTC------TTTEEEECSCGGGGGGTSCTTCEE
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCC------cccEEEEECcHHHhhhhhccCCcc
Confidence 5789999999999999999887554 999999999999999998864432 45899999999998653 368999
Q ss_pred EEEEcCCCC-C---CCCC------------CcchHHHHHHHHhccCCCcEEEEEe
Q 038076 219 GIVVDLFSE-G---KVLP------------QLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 219 ~Ii~D~f~~-~---~~p~------------~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
+|++|..-. . .... ...-.++++.+.+.|+|||.+++-.
T Consensus 122 ~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 122 IVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp EEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence 999974321 0 0000 0112468999999999999999843
No 45
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.33 E-value=3.2e-12 Score=116.63 Aligned_cols=104 Identities=15% Similarity=0.256 Sum_probs=86.2
Q ss_pred CCCCCEEEEeecccHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDL-WPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~-~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
.++.+||++|||+|.++..+++. .|..+++++|++|.+++.|++++..... ..+++++.+|+.+.+ .+++|
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~------~~~v~~~~~d~~~~~--~~~~~ 163 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF------DDRVTIKLKDIYEGI--EEENV 163 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC------TTTEEEECSCGGGCC--CCCSE
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC------CCceEEEECchhhcc--CCCCc
Confidence 46779999999999999999988 7789999999999999999998742221 346999999999875 35679
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
|+|++|..+. .++++.+.+.|+|||.+++....
T Consensus 164 D~v~~~~~~~---------~~~l~~~~~~L~~gG~l~~~~~~ 196 (255)
T 3mb5_A 164 DHVILDLPQP---------ERVVEHAAKALKPGGFFVAYTPC 196 (255)
T ss_dssp EEEEECSSCG---------GGGHHHHHHHEEEEEEEEEEESS
T ss_pred CEEEECCCCH---------HHHHHHHHHHcCCCCEEEEEECC
Confidence 9999975332 36799999999999999987654
No 46
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.33 E-value=5.9e-12 Score=114.41 Aligned_cols=104 Identities=11% Similarity=-0.043 Sum_probs=84.4
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc--CCCc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED--ASGR 216 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~--~~~~ 216 (345)
.++.+||+||||+|..+..+....|+.+|++||+++.+++.|++...... -++++++++|+.++... ..++
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-------~~~v~~~~~d~~~~~~~~~~~~~ 141 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQ-------LENTTFCHDRAETFGQRKDVRES 141 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT-------CSSEEEEESCHHHHTTCTTTTTC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-------CCCEEEEeccHHHhcccccccCC
Confidence 35689999999999999998877788999999999999999998764221 23599999999886421 2578
Q ss_pred ccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEe
Q 038076 217 YAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
||+|+++... .-.++++.+.+.|+|||.+++..
T Consensus 142 fD~V~~~~~~--------~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 142 YDIVTARAVA--------RLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp EEEEEEECCS--------CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ccEEEEeccC--------CHHHHHHHHHHhcCCCCEEEEEe
Confidence 9999997632 13679999999999999998754
No 47
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.33 E-value=5.9e-12 Score=112.75 Aligned_cols=112 Identities=13% Similarity=0.047 Sum_probs=87.8
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccc-cCCCccc
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSE-DASGRYA 218 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~-~~~~~yD 218 (345)
+..+||+||||+|.++..+++.+|+.++++||+++.+++.|++...... -++++++.+|+.++.. -.+..||
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~-------~~nv~~~~~d~~~l~~~~~~~~~d 110 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSE-------AQNVKLLNIDADTLTDVFEPGEVK 110 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSC-------CSSEEEECCCGGGHHHHCCTTSCC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcC-------CCCEEEEeCCHHHHHhhcCcCCcC
Confidence 4578999999999999999998899999999999999999998764222 2469999999988422 2457899
Q ss_pred EEEEcCCCCCCC----CCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 219 GIVVDLFSEGKV----LPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 219 ~Ii~D~f~~~~~----p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
.|++...++... ...+...++++.+.+.|+|||.+++...
T Consensus 111 ~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 111 RVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred EEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 999865443211 1123457899999999999999988653
No 48
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.33 E-value=1.9e-12 Score=117.13 Aligned_cols=107 Identities=16% Similarity=0.087 Sum_probs=83.3
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc-CCCcc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED-ASGRY 217 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~-~~~~y 217 (345)
.+..+||+||||+|..+..+.+. +..+|++||+++.+++.|+++.... .++++++.+|+.+.+.. .+++|
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~--------~~~v~~~~~d~~~~~~~~~~~~f 129 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEA-PIDEHWIIECNDGVFQRLRDWAPRQ--------THKVIPLKGLWEDVAPTLPDGHF 129 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTS-CEEEEEEEECCHHHHHHHHHHGGGC--------SSEEEEEESCHHHHGGGSCTTCE
T ss_pred CCCCeEEEEeccCCHHHHHHHhc-CCCeEEEEcCCHHHHHHHHHHHHhc--------CCCeEEEecCHHHhhcccCCCce
Confidence 35679999999999999998754 3459999999999999999987522 36899999999986432 45789
Q ss_pred cEEEEcCCCCCCCC-CCcc-hHHHHHHHHhccCCCcEEEE
Q 038076 218 AGIVVDLFSEGKVL-PQLE-EVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 218 D~Ii~D~f~~~~~p-~~l~-t~ef~~~~~~~L~pgGvlvv 255 (345)
|+|++|.+.. ..+ .+.. ...+++++++.|+|||++++
T Consensus 130 D~V~~d~~~~-~~~~~~~~~~~~~l~~~~r~LkpgG~l~~ 168 (236)
T 1zx0_A 130 DGILYDTYPL-SEETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp EEEEECCCCC-BGGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred EEEEECCccc-chhhhhhhhHHHHHHHHHHhcCCCeEEEE
Confidence 9999986653 211 1222 23568999999999999885
No 49
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.33 E-value=9.3e-13 Score=115.85 Aligned_cols=112 Identities=12% Similarity=0.023 Sum_probs=71.1
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc---CCC
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED---ASG 215 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~---~~~ 215 (345)
.++.+||++|||+|.++..+.+..|+.+++++|+|+.+++.|++++.... .+++++.+|+.+.+.. ..+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~ 100 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFG--------AVVDWAAADGIEWLIERAERGR 100 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------------CCHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhC--------CceEEEEcchHhhhhhhhhccC
Confidence 56789999999999999999999888999999999999999999875332 2789999999986543 348
Q ss_pred cccEEEEcCCCCCC-----CCCCcc-----------------hHHHHHHHHhccCCCcE-EEEEec
Q 038076 216 RYAGIVVDLFSEGK-----VLPQLE-----------------EVATWLKLKDRLMPNGR-FMVNCG 258 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~-----~p~~l~-----------------t~ef~~~~~~~L~pgGv-lvvn~~ 258 (345)
+||+|++|..-... .+.... -.++++.+++.|+|||. +++.+.
T Consensus 101 ~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 101 PWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp CBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred cccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 99999997532110 011110 06788999999999999 665554
No 50
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.33 E-value=8.6e-12 Score=111.01 Aligned_cols=115 Identities=13% Similarity=0.012 Sum_probs=85.0
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|.++..+.+..+..++++||+++.+++.|++.+...... ....++++++.+|+.. +....++||
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~~~~~v~~~~~d~~~-~~~~~~~fD 104 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLP--RNQWERLQLIQGALTY-QDKRFHGYD 104 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCC--HHHHTTEEEEECCTTS-CCGGGCSCS
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCC--cccCcceEEEeCCccc-ccccCCCcC
Confidence 4678999999999999999998777789999999999999999988643210 0012389999999854 333457899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
+|++...-. .++. -...++++.+++.|+|||++++...
T Consensus 105 ~v~~~~~l~-~~~~-~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 105 AATVIEVIE-HLDL-SRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp EEEEESCGG-GCCH-HHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred EEeeHHHHH-cCCH-HHHHHHHHHHHHHcCCCEEEEEccC
Confidence 999742111 1111 1125789999999999998876543
No 51
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.32 E-value=1.1e-11 Score=110.28 Aligned_cols=105 Identities=12% Similarity=0.053 Sum_probs=84.4
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+||+||||+|.++..+++. +.+|++||++|++++.|++....... ..+++++.+|+.+.+.. .++||
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~------~~~v~~~~~d~~~~~~~-~~~~D 124 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGL------SPRMRAVQGTAPAALAD-LPLPE 124 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC------TTTEEEEESCTTGGGTT-SCCCS
T ss_pred CCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCC------CCCEEEEeCchhhhccc-CCCCC
Confidence 45678999999999999999886 78999999999999999988642221 23799999999996643 35799
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
+|+++... ... +++.+.+.|+|||.+++.....+
T Consensus 125 ~v~~~~~~--------~~~-~l~~~~~~LkpgG~lv~~~~~~~ 158 (204)
T 3njr_A 125 AVFIGGGG--------SQA-LYDRLWEWLAPGTRIVANAVTLE 158 (204)
T ss_dssp EEEECSCC--------CHH-HHHHHHHHSCTTCEEEEEECSHH
T ss_pred EEEECCcc--------cHH-HHHHHHHhcCCCcEEEEEecCcc
Confidence 99986411 223 99999999999999998877543
No 52
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.32 E-value=7e-12 Score=115.22 Aligned_cols=112 Identities=13% Similarity=0.024 Sum_probs=88.7
Q ss_pred ccccCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCC
Q 038076 135 LPAIVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDAS 214 (345)
Q Consensus 135 l~~~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~ 214 (345)
++.+.++.+||+||||+|..+..+.+. +..+|++||++|.+++.|++.+.... ..++++++.+|+.+. ...+
T Consensus 41 l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~------~~~~v~~~~~d~~~~-~~~~ 112 (267)
T 3kkz_A 41 IDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSG------LQNRVTGIVGSMDDL-PFRN 112 (267)
T ss_dssp CCCCCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTT------CTTTEEEEECCTTSC-CCCT
T ss_pred cccCCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcC------CCcCcEEEEcChhhC-CCCC
Confidence 333456789999999999999999987 77899999999999999998874322 146799999999875 3346
Q ss_pred CcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 215 GRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
++||+|++...- .++...++++.+++.|+|||.+++....
T Consensus 113 ~~fD~i~~~~~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 113 EELDLIWSEGAI-----YNIGFERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp TCEEEEEESSCG-----GGTCHHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred CCEEEEEEcCCc-----eecCHHHHHHHHHHHcCCCCEEEEEEee
Confidence 899999984321 2223578999999999999999887543
No 53
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.32 E-value=9.7e-12 Score=113.08 Aligned_cols=111 Identities=12% Similarity=0.051 Sum_probs=87.9
Q ss_pred ccccCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCC
Q 038076 135 LPAIVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDAS 214 (345)
Q Consensus 135 l~~~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~ 214 (345)
++.+.++.+||+||||+|..+..+.+..+. +|++||+++.+++.|++.+.... ..++++++.+|+.+. ...+
T Consensus 41 l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~~~d~~~~-~~~~ 112 (257)
T 3f4k_A 41 INELTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKAN------CADRVKGITGSMDNL-PFQN 112 (257)
T ss_dssp SCCCCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTT------CTTTEEEEECCTTSC-SSCT
T ss_pred HhcCCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcC------CCCceEEEECChhhC-CCCC
Confidence 334456679999999999999999988764 99999999999999998874322 145799999999765 3346
Q ss_pred CcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 215 GRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
++||+|++...- .++...++++.+++.|+|||.+++...
T Consensus 113 ~~fD~v~~~~~l-----~~~~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 113 EELDLIWSEGAI-----YNIGFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp TCEEEEEEESCS-----CCCCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCEEEEEecChH-----hhcCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 899999986322 122356899999999999999988753
No 54
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.32 E-value=1.1e-11 Score=116.13 Aligned_cols=112 Identities=15% Similarity=0.063 Sum_probs=88.2
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+||+||||+|.++..+.+.++ .+|+++|+++.+++.|++.+...+. ..+++++.+|+.++ +++||
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~------~~~v~~~~~d~~~~----~~~fD 139 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDS------PRRKEVRIQGWEEF----DEPVD 139 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCC------SSCEEEEECCGGGC----CCCCS
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCC------CCceEEEECCHHHc----CCCcc
Confidence 4567999999999999999998766 8999999999999999998743221 35899999999886 68999
Q ss_pred EEEEcCCCCCCCCC------CcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 219 GIVVDLFSEGKVLP------QLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~------~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
+|++...-. .++. .-.-.++++++++.|+|||.+++.......
T Consensus 140 ~v~~~~~~~-~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 188 (302)
T 3hem_A 140 RIVSLGAFE-HFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPD 188 (302)
T ss_dssp EEEEESCGG-GTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCC
T ss_pred EEEEcchHH-hcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccC
Confidence 999853211 1211 123368999999999999999998776553
No 55
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.31 E-value=3.3e-11 Score=108.05 Aligned_cols=104 Identities=16% Similarity=0.134 Sum_probs=83.0
Q ss_pred CCCCCEEEEeecccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccc--ccCCC
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLW-PSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPS--EDASG 215 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~-p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l--~~~~~ 215 (345)
.+..+||++|||+|.++..+.+.. |..+|+++|+++.+++.+++.... .++++++.+|+.+.. ...++
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~---------~~~v~~~~~d~~~~~~~~~~~~ 142 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE---------RRNIVPILGDATKPEEYRALVP 142 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS---------CTTEEEEECCTTCGGGGTTTCC
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc---------cCCCEEEEccCCCcchhhcccC
Confidence 456789999999999999999774 568999999999999999887752 257999999998742 22356
Q ss_pred cccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEe
Q 038076 216 RYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
+||+|++|... ......+++.+.+.|+|||.+++.+
T Consensus 143 ~~D~v~~~~~~------~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 143 KVDVIFEDVAQ------PTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp CEEEEEECCCS------TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CceEEEECCCC------HhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 89999998642 1123456999999999999988874
No 56
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.31 E-value=1.1e-12 Score=119.07 Aligned_cols=107 Identities=12% Similarity=0.107 Sum_probs=86.7
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccC---C
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWP-SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDA---S 214 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p-~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~---~ 214 (345)
.++++||+||||+|..+.++++..| +.+|+++|++|.+++.|++++.... ..++++++.+|+.+++... +
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g------~~~~i~~~~~d~~~~l~~l~~~~ 144 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAG------VAEKISLRLGPALATLEQLTQGK 144 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT------CGGGEEEEESCHHHHHHHHHTSS
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC------CCCcEEEEEcCHHHHHHHHHhcC
Confidence 3578999999999999999998776 6899999999999999999874222 1357999999998876431 2
Q ss_pred --CcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 215 --GRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 215 --~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
++||+|++|.... ...++++.+.+.|+|||++++.-.
T Consensus 145 ~~~~fD~V~~d~~~~-------~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 145 PLPEFDLIFIDADKR-------NYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp SCCCEEEEEECSCGG-------GHHHHHHHHHHTEEEEEEEEEECT
T ss_pred CCCCcCEEEECCCHH-------HHHHHHHHHHHHcCCCeEEEEeCC
Confidence 7899999986421 236799999999999999998643
No 57
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.31 E-value=7e-12 Score=111.58 Aligned_cols=112 Identities=14% Similarity=0.163 Sum_probs=84.4
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|.++..+.+..|..++++||+++.+++.|++.+...... ....++++++.+|+.. +....++||
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~~~~~v~~~~~d~~~-~~~~~~~fD 104 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLP--EMQRKRISLFQSSLVY-RDKRFSGYD 104 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSC--HHHHTTEEEEECCSSS-CCGGGTTCS
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccc--cccCcceEEEeCcccc-cccccCCCC
Confidence 4678999999999999999998777789999999999999999987532210 0011389999999844 333467999
Q ss_pred EEEEcCCCCCCCCCCcch---HHHHHHHHhccCCCcEEEEEec
Q 038076 219 GIVVDLFSEGKVLPQLEE---VATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t---~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
+|++... ..++.. .++++++++.|+|||+++....
T Consensus 105 ~V~~~~~-----l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 105 AATVIEV-----IEHLDENRLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp EEEEESC-----GGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred EEEEHHH-----HHhCCHHHHHHHHHHHHHhhCCCEEEEEccc
Confidence 9997421 122222 4799999999999998776543
No 58
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.30 E-value=3.3e-12 Score=115.89 Aligned_cols=106 Identities=13% Similarity=0.132 Sum_probs=86.1
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccC----
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWP-SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDA---- 213 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p-~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~---- 213 (345)
.++.+||+||||+|..+..+++..| +.+|++||++|.+++.|++++.... ..++++++.+|+.+++...
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g------~~~~v~~~~~d~~~~~~~~~~~~ 132 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENG------LENKIFLKLGSALETLQVLIDSK 132 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT------CGGGEEEEESCHHHHHHHHHHCS
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC------CCCCEEEEECCHHHHHHHHHhhc
Confidence 4678999999999999999998876 6899999999999999999874322 1357999999998865421
Q ss_pred -----------C-CcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEe
Q 038076 214 -----------S-GRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 214 -----------~-~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
+ ++||+|++|.... ...++++.+.+.|+|||++++..
T Consensus 133 ~~~~~~~~f~~~~~~fD~I~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 133 SAPSWASDFAFGPSSIDLFFLDADKE-------NYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp SCCGGGTTTCCSTTCEEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccccccccCCCCCcCEEEEeCCHH-------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 2 7899999984221 23478999999999999999864
No 59
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.30 E-value=2.4e-11 Score=108.91 Aligned_cols=104 Identities=12% Similarity=0.050 Sum_probs=77.4
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccc--cCCCc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSE--DASGR 216 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~--~~~~~ 216 (345)
.+..+||+||||+|..+..+.+..+..+|++||++|.+++.+.+... . .+++.++.+|+..... ...++
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~--~-------~~~v~~~~~d~~~~~~~~~~~~~ 126 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVR--E-------RNNIIPLLFDASKPWKYSGIVEK 126 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHH--H-------CSSEEEECSCTTCGGGTTTTCCC
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHh--c-------CCCeEEEEcCCCCchhhcccccc
Confidence 45678999999999999999987766799999999987654443221 0 1358888999987411 12478
Q ss_pred ccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEe
Q 038076 217 YAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
||+|++|... +.....+++++++.|+|||.+++.+
T Consensus 127 fD~V~~~~~~------~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 127 VDLIYQDIAQ------KNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEEEEECCCS------TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEEeccC------hhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 9999998422 1223346899999999999999885
No 60
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.29 E-value=5.8e-11 Score=107.10 Aligned_cols=103 Identities=17% Similarity=0.093 Sum_probs=83.1
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccc--cCCCc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSE--DASGR 216 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~--~~~~~ 216 (345)
.+..+||+||||+|.++..+++..+..+|++||+++.+++.|++.... .++++++.+|+.+... ...++
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~---------~~~v~~~~~d~~~~~~~~~~~~~ 143 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE---------RENIIPILGDANKPQEYANIVEK 143 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT---------CTTEEEEECCTTCGGGGTTTSCC
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc---------CCCeEEEECCCCCcccccccCcc
Confidence 456789999999999999999887778999999999999999988642 2679999999987211 12378
Q ss_pred ccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 217 YAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
||+|++|.... -....+++.+.+.|+|||.+++.
T Consensus 144 ~D~v~~~~~~~------~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 144 VDVIYEDVAQP------NQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEEEECCCST------THHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEEecCCh------hHHHHHHHHHHHhCCCCcEEEEE
Confidence 99999765321 23467899999999999999886
No 61
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.28 E-value=9.1e-11 Score=107.21 Aligned_cols=151 Identities=13% Similarity=0.098 Sum_probs=107.4
Q ss_pred CCCCCEEEEeecccHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccc--cCCC
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDL-WPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSE--DASG 215 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~-~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~--~~~~ 215 (345)
.+..+||+||||+|+++..+.+. -|..+|++||++|.+++.+++...- .+++..+.+|++..-. ...+
T Consensus 76 kpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~---------~~ni~~V~~d~~~p~~~~~~~~ 146 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD---------RRNIFPILGDARFPEKYRHLVE 146 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT---------CTTEEEEESCTTCGGGGTTTCC
T ss_pred CCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh---------hcCeeEEEEeccCccccccccc
Confidence 56789999999999999999986 4779999999999999999987641 4689999999987532 2457
Q ss_pred cccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHH-CC
Q 038076 216 RYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEA-FP 294 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~-F~ 294 (345)
.+|+|++|...++ ....++.++++.|||||.+++.+.....+.... ....+++..+.|++. |.
T Consensus 147 ~vDvVf~d~~~~~------~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p----------~~~~~~~ev~~L~~~GF~ 210 (233)
T 4df3_A 147 GVDGLYADVAQPE------QAAIVVRNARFFLRDGGYMLMAIKARSIDVTTE----------PSEVYKREIKTLMDGGLE 210 (233)
T ss_dssp CEEEEEECCCCTT------HHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTC----------CCHHHHHHHHHHHHTTCC
T ss_pred eEEEEEEeccCCh------hHHHHHHHHHHhccCCCEEEEEEecccCCCCCC----------hHHHHHHHHHHHHHCCCE
Confidence 8999999864432 346789999999999999988654333210000 014567777888765 66
Q ss_pred CCEEEEEecCCCCceEEEEeC
Q 038076 295 GKVSWKRMPERNGENFLALTG 315 (345)
Q Consensus 295 ~~v~~~~~~~~~~~n~v~~a~ 315 (345)
.+....+..-..+..++++.
T Consensus 211 -l~e~i~L~pf~~~H~lv~~~ 230 (233)
T 4df3_A 211 -IKDVVHLDPFDRDHAMIYAV 230 (233)
T ss_dssp -EEEEEECTTTSTTEEEEEEC
T ss_pred -EEEEEccCCCCCceEEEEEE
Confidence 44444443322344555543
No 62
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.28 E-value=8.8e-12 Score=113.75 Aligned_cols=117 Identities=13% Similarity=0.005 Sum_probs=86.2
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCC-CCCCCCCCCCCcEEEEEcccccccc--cCCCc
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGL-SDLEKPTATGGVLQVHIGDVFSPSE--DASGR 216 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~-~~~~~~~~~~~rv~v~~gDa~~~l~--~~~~~ 216 (345)
+..+||+||||+|.++..+++.+|+..+++||+++.+++.|++.... .... ....++++++.+|+.+++. -.+++
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~--~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAP--AGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHST--TCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHH--hcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 45689999999999999999888999999999999999999876421 0000 0013579999999998654 24678
Q ss_pred ccEEEEcCCCCCCC----CCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 217 YAGIVVDLFSEGKV----LPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 217 yD~Ii~D~f~~~~~----p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
||.|++...++..- -..+...++++.+.+.|+|||.+++...
T Consensus 124 ~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 124 LTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp EEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred eeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 99999854433211 0113346899999999999999987654
No 63
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.28 E-value=2.5e-11 Score=118.38 Aligned_cols=114 Identities=15% Similarity=0.124 Sum_probs=87.2
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
++.+||++|||+|.++..+.+..|+.+|++||+|+.+++.|++++..... ....+++++.+|+.+.+ .+++||+
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl----~~~~~v~~~~~D~~~~~--~~~~fD~ 295 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP----EALDRCEFMINNALSGV--EPFRFNA 295 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCG----GGGGGEEEEECSTTTTC--CTTCEEE
T ss_pred CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCC----CcCceEEEEechhhccC--CCCCeeE
Confidence 44799999999999999999999999999999999999999988743221 01236889999999865 3578999
Q ss_pred EEEcCCCCCC-CCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 220 IVVDLFSEGK-VLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 220 Ii~D~f~~~~-~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
|+++..-... ....-...++++.+++.|+|||.+++-+..
T Consensus 296 Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 296 VLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp EEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred EEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 9997533211 111223457999999999999999986543
No 64
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.28 E-value=1.8e-11 Score=107.89 Aligned_cols=107 Identities=12% Similarity=0.097 Sum_probs=85.2
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
++.+||+||||+|.++..+.+. ++.+++++|+++.+++.|++.+.... ..++++++.+|+.+. ...+++||+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~------~~~~~~~~~~d~~~~-~~~~~~~D~ 114 (219)
T 3dlc_A 43 TAGTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADAN------LNDRIQIVQGDVHNI-PIEDNYADL 114 (219)
T ss_dssp CEEEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTT------CTTTEEEEECBTTBC-SSCTTCEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhcc------ccCceEEEEcCHHHC-CCCcccccE
Confidence 3459999999999999999987 77899999999999999999874322 146899999999884 335689999
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
|++...-. .. -...++++++++.|+|||.+++...
T Consensus 115 v~~~~~l~-~~---~~~~~~l~~~~~~L~pgG~l~~~~~ 149 (219)
T 3dlc_A 115 IVSRGSVF-FW---EDVATAFREIYRILKSGGKTYIGGG 149 (219)
T ss_dssp EEEESCGG-GC---SCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEECchHh-hc---cCHHHHHHHHHHhCCCCCEEEEEec
Confidence 99853221 11 1236799999999999999988643
No 65
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.28 E-value=1.4e-11 Score=114.61 Aligned_cols=126 Identities=9% Similarity=-0.091 Sum_probs=99.1
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
+.+..+||++|||+|.++..+++..+..+|++||++|.+++.|+++..... -++++++.+|+.++ .. .++|
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~-------l~~~~~~~~d~~~~-~~-~~~~ 187 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNK-------LNNVIPILADNRDV-EL-KDVA 187 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTT-------CSSEEEEESCGGGC-CC-TTCE
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-------CCCEEEEECChHHc-Cc-cCCc
Confidence 356789999999999999999988777899999999999999999875433 24688999999998 44 6789
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHCC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAFP 294 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F~ 294 (345)
|+|++|... ...+++..+.+.|+|||++++.+...... . .......++.+.+.+.
T Consensus 188 D~Vi~d~p~--------~~~~~l~~~~~~LkpgG~l~~s~~~~~~~---~-----------~~~~~~~~~~~~~~~~ 242 (272)
T 3a27_A 188 DRVIMGYVH--------KTHKFLDKTFEFLKDRGVIHYHETVAEKI---M-----------YERPIERLKFYAEKNG 242 (272)
T ss_dssp EEEEECCCS--------SGGGGHHHHHHHEEEEEEEEEEEEEEGGG---T-----------TTHHHHHHHHHHHHTT
T ss_pred eEEEECCcc--------cHHHHHHHHHHHcCCCCEEEEEEcCcccc---c-----------cccHHHHHHHHHHHhC
Confidence 999998532 23468899999999999999888765331 0 0235566777777664
No 66
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.27 E-value=1.2e-11 Score=109.72 Aligned_cols=107 Identities=11% Similarity=0.012 Sum_probs=84.1
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|..+..+.+. ..+++++|+++.+++.|++.+.. .++++++.+|+.++. .+++||
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~---------~~~~~~~~~d~~~~~--~~~~fD 116 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPH--CKRLTVIDVMPRAIGRACQRTKR---------WSHISWAATDILQFS--TAELFD 116 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGG--EEEEEEEESCHHHHHHHHHHTTT---------CSSEEEEECCTTTCC--CSCCEE
T ss_pred CCCCcEEEEcCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhccc---------CCCeEEEEcchhhCC--CCCCcc
Confidence 45679999999999999999876 36999999999999999998752 348999999999875 578999
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+|++...-. +++..-.-.++++.+++.|+|||.+++....
T Consensus 117 ~v~~~~~l~-~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 117 LIVVAEVLY-YLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp EEEEESCGG-GSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEEEccHHH-hCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 999852111 1221111247799999999999999986643
No 67
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.27 E-value=4.4e-12 Score=109.55 Aligned_cols=112 Identities=13% Similarity=0.033 Sum_probs=86.3
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc---CCC
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED---ASG 215 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~---~~~ 215 (345)
.++.+||++|||+|..+..+.+ .+..+|++||+||.+++.|++++..... .++++++.+|+.+++.. ..+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~~ 115 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVS-RGMDKSICIEKNFAALKVIKENIAITKE------PEKFEVRKMDANRALEQFYEEKL 115 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHTC------GGGEEEEESCHHHHHHHHHHTTC
T ss_pred cCCCCEEEeCCccCHHHHHHHH-cCCCEEEEEECCHHHHHHHHHHHHHhCC------CcceEEEECcHHHHHHHHHhcCC
Confidence 4568999999999999998877 4568999999999999999988743221 35799999999987542 267
Q ss_pred cccEEEEcCCCCCCCCCCcchHHHHHHH--HhccCCCcEEEEEecCCCC
Q 038076 216 RYAGIVVDLFSEGKVLPQLEEVATWLKL--KDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~~p~~l~t~ef~~~~--~~~L~pgGvlvvn~~~~~~ 262 (345)
+||+|++|..-. .....+.++.+ .+.|+|||++++.......
T Consensus 116 ~fD~i~~~~~~~-----~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 116 QFDLVLLDPPYA-----KQEIVSQLEKMLERQLLTNEAVIVCETDKTVK 159 (187)
T ss_dssp CEEEEEECCCGG-----GCCHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred CCCEEEECCCCC-----chhHHHHHHHHHHhcccCCCCEEEEEeCCccc
Confidence 899999974311 11335667777 8889999999988776554
No 68
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.26 E-value=7e-12 Score=114.36 Aligned_cols=99 Identities=16% Similarity=0.041 Sum_probs=80.7
Q ss_pred CCCCEEEEeecccHHHHHHHHh----CCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc--cccC
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDL----WPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP--SEDA 213 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~----~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~--l~~~ 213 (345)
++.+||+||||+|..+..+++. .|+.+|++||++|.+++.|+.. .++++++++|+.+. +...
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~------------~~~v~~~~gD~~~~~~l~~~ 148 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD------------MENITLHQGDCSDLTTFEHL 148 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG------------CTTEEEEECCSSCSGGGGGG
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc------------CCceEEEECcchhHHHHHhh
Confidence 5689999999999999999886 6789999999999999988721 35799999999986 4332
Q ss_pred C-CcccEEEEcCCCCCCCCCCcchHHHHHHHHh-ccCCCcEEEEEe
Q 038076 214 S-GRYAGIVVDLFSEGKVLPQLEEVATWLKLKD-RLMPNGRFMVNC 257 (345)
Q Consensus 214 ~-~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~-~L~pgGvlvvn~ 257 (345)
. .+||+|++|... ....+++.++.+ .|+|||++++.-
T Consensus 149 ~~~~fD~I~~d~~~-------~~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 149 REMAHPLIFIDNAH-------ANTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp SSSCSSEEEEESSC-------SSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred ccCCCCEEEECCch-------HhHHHHHHHHHHhhCCCCCEEEEEe
Confidence 3 479999998742 133678999997 999999999853
No 69
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.26 E-value=2.8e-11 Score=106.83 Aligned_cols=104 Identities=12% Similarity=0.149 Sum_probs=84.7
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
..+..+||+||||+|.++..+.+. +.+++++|+++.+++.|++ .+ .++++++.+|+.++ ..+++|
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~-~~----------~~~~~~~~~d~~~~--~~~~~~ 108 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGR-HG----------LDNVEFRQQDLFDW--TPDRQW 108 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGG-GC----------CTTEEEEECCTTSC--CCSSCE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHh-cC----------CCCeEEEecccccC--CCCCce
Confidence 345679999999999999999887 6799999999999999998 22 25799999999987 357899
Q ss_pred cEEEEcCCCCCCCCCCcch---HHHHHHHHhccCCCcEEEEEecCCC
Q 038076 218 AGIVVDLFSEGKVLPQLEE---VATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t---~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
|+|++...- .++.. .++++++++.|+|||.+++......
T Consensus 109 D~v~~~~~l-----~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 150 (218)
T 3ou2_A 109 DAVFFAHWL-----AHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDH 150 (218)
T ss_dssp EEEEEESCG-----GGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred eEEEEechh-----hcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCC
Confidence 999985311 22222 6789999999999999998876654
No 70
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.26 E-value=1.7e-11 Score=111.41 Aligned_cols=107 Identities=10% Similarity=0.021 Sum_probs=84.0
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
..+..+||+||||+|.++..+.+.. +.+++++|++|.+++.|++.+.... ..++++++.+|+.+... +++|
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~------~~~~v~~~~~d~~~~~~--~~~f 104 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELG------VSERVHFIHNDAAGYVA--NEKC 104 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTT------CTTTEEEEESCCTTCCC--SSCE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcC------CCcceEEEECChHhCCc--CCCC
Confidence 3567899999999999999998876 5799999999999999998874222 13589999999988643 6789
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEe
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
|+|++-... ...+ ...++++++++.|+|||.+++..
T Consensus 105 D~V~~~~~~-~~~~---~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 105 DVAACVGAT-WIAG---GFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp EEEEEESCG-GGTS---SSHHHHHHHTTSEEEEEEEEEEE
T ss_pred CEEEECCCh-HhcC---CHHHHHHHHHHHcCCCeEEEEec
Confidence 999973211 1111 23688999999999999998854
No 71
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.26 E-value=2.2e-11 Score=112.13 Aligned_cols=117 Identities=17% Similarity=0.188 Sum_probs=91.3
Q ss_pred HHHhhccccCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc
Q 038076 130 DEFVSLPAIVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP 209 (345)
Q Consensus 130 ~~~~~l~~~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~ 209 (345)
+.+.....+.++.+||+||||+|.++..+.+..|+.++++||+++.+++.|++.+.... -++++++.+|+.+.
T Consensus 27 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~~~~d~~~~ 99 (276)
T 3mgg_A 27 KLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNG-------IKNVKFLQANIFSL 99 (276)
T ss_dssp HHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT-------CCSEEEEECCGGGC
T ss_pred HHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-------CCCcEEEEcccccC
Confidence 33333344457789999999999999999999889999999999999999999875322 24799999999875
Q ss_pred cccCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 210 SEDASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 210 l~~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
. ..+++||+|++...-. .++ ...++++.+++.|+|||.+++...
T Consensus 100 ~-~~~~~fD~v~~~~~l~-~~~---~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 100 P-FEDSSFDHIFVCFVLE-HLQ---SPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp C-SCTTCEEEEEEESCGG-GCS---CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C-CCCCCeeEEEEechhh-hcC---CHHHHHHHHHHHcCCCcEEEEEEc
Confidence 3 3468999999853221 111 225899999999999999988654
No 72
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.26 E-value=2.2e-11 Score=112.00 Aligned_cols=105 Identities=14% Similarity=0.002 Sum_probs=85.6
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc--CCCc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED--ASGR 216 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~--~~~~ 216 (345)
.++.+||+||||+|..+..+...+|+.+|++||+++.+++.|++...... -.+++++++|+.++... ..++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-------l~~v~~~~~d~~~~~~~~~~~~~ 151 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLG-------LKGARALWGRAEVLAREAGHREA 151 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT-------CSSEEEEECCHHHHTTSTTTTTC
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhC-------CCceEEEECcHHHhhcccccCCC
Confidence 35678999999999999999988899999999999999999998764222 23599999999887532 2478
Q ss_pred ccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 217 YAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
||+|++..... -..+++.+.+.|+|||.+++-..
T Consensus 152 fD~I~s~a~~~--------~~~ll~~~~~~LkpgG~l~~~~g 185 (249)
T 3g89_A 152 YARAVARAVAP--------LCVLSELLLPFLEVGGAAVAMKG 185 (249)
T ss_dssp EEEEEEESSCC--------HHHHHHHHGGGEEEEEEEEEEEC
T ss_pred ceEEEECCcCC--------HHHHHHHHHHHcCCCeEEEEEeC
Confidence 99999975431 25789999999999999887554
No 73
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.26 E-value=1.1e-11 Score=110.09 Aligned_cols=109 Identities=14% Similarity=0.001 Sum_probs=84.8
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
+..+||++|||+|.++..+++.. ..+|++||+||.+++.|++++.... -++++++.+|+.+++....++||+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~~-------~~~v~~~~~D~~~~~~~~~~~fD~ 125 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATLK-------AGNARVVNSNAMSFLAQKGTPHNI 125 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTT-------CCSEEEECSCHHHHHSSCCCCEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHcC-------CCcEEEEECCHHHHHhhcCCCCCE
Confidence 46799999999999999877653 3599999999999999999875322 257999999999987666678999
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHh--ccCCCcEEEEEecCCC
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKD--RLMPNGRFMVNCGGID 261 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~--~L~pgGvlvvn~~~~~ 261 (345)
|++|..-. .-...++++.+.+ .|+|||++++.+....
T Consensus 126 V~~~~p~~-----~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~ 164 (202)
T 2fpo_A 126 VFVDPPFR-----RGLLEETINLLEDNGWLADEALIYVESEVEN 164 (202)
T ss_dssp EEECCSSS-----TTTHHHHHHHHHHTTCEEEEEEEEEEEEGGG
T ss_pred EEECCCCC-----CCcHHHHHHHHHhcCccCCCcEEEEEECCCc
Confidence 99975311 1123567777765 4999999998776544
No 74
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.26 E-value=2.7e-11 Score=107.02 Aligned_cols=102 Identities=18% Similarity=0.197 Sum_probs=82.9
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
..++.+||+||||+|..+..+.+. ..+|+++|+++.+++.|++++.... -++++++.+|+.+... ..++|
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~-------~~~v~~~~~d~~~~~~-~~~~~ 144 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLD-------LHNVSTRHGDGWQGWQ-ARAPF 144 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTT-------CCSEEEEESCGGGCCG-GGCCE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcC-------CCceEEEECCcccCCc-cCCCc
Confidence 356789999999999999999887 6899999999999999999875322 2479999999988654 36789
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
|+|+++.... .++ +.+.+.|+|||.+++.+..
T Consensus 145 D~i~~~~~~~-~~~---------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 145 DAIIVTAAPP-EIP---------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EEEEESSBCS-SCC---------THHHHTEEEEEEEEEEECS
T ss_pred cEEEEccchh-hhh---------HHHHHhcccCcEEEEEEcC
Confidence 9999975332 222 2578999999999999887
No 75
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.26 E-value=1e-11 Score=110.12 Aligned_cols=111 Identities=12% Similarity=0.029 Sum_probs=84.3
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc-CCCc-c
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED-ASGR-Y 217 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~-~~~~-y 217 (345)
+..+||++|||+|.++..+++. ...+|++||+||.+++.|++++..... ..++++++.+|+.+++.. .+++ |
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~-----~~~~v~~~~~d~~~~~~~~~~~~~f 126 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSR-QAKKVTFLELDKTVANQLKKNLQTLKC-----SSEQAEVINQSSLDFLKQPQNQPHF 126 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT-TCSEEEEECSCHHHHHHHHHHHHHTTC-----CTTTEEEECSCHHHHTTSCCSSCCE
T ss_pred CCCeEEEcCCccCHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHHhCC-----CccceEEEECCHHHHHHhhccCCCC
Confidence 4679999999999999987765 336999999999999999998753221 015899999999988654 3567 9
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHH--HhccCCCcEEEEEecCCC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKL--KDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~--~~~L~pgGvlvvn~~~~~ 261 (345)
|+|++|..-. .-...++++.+ .+.|+|||++++.+....
T Consensus 127 D~I~~~~~~~-----~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 127 DVVFLDPPFH-----FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp EEEEECCCSS-----SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CEEEECCCCC-----CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 9999975311 11235678888 567999999988776543
No 76
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.25 E-value=7.4e-12 Score=117.75 Aligned_cols=115 Identities=13% Similarity=0.110 Sum_probs=88.7
Q ss_pred CCCCCEEEEeecccHHHHHHH-HhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 139 VPNGPIAIYGLGGGTAAHLML-DLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~-~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
.++.+||+||||+|..+..+. ...|+.+|+++|+++.+++.|++++.... ...+++++.+|+.+... +++|
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~------~~~~v~~~~~d~~~~~~--~~~f 188 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHA------LAGQITLHRQDAWKLDT--REGY 188 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTST------TGGGEEEEECCGGGCCC--CSCE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcC------CCCceEEEECchhcCCc--cCCe
Confidence 567899999999999999884 45688999999999999999999986432 14579999999998632 3899
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
|+|++..... ..+..-...++++++++.|+|||.+++.......
T Consensus 189 D~v~~~~~~~-~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 232 (305)
T 3ocj_A 189 DLLTSNGLNI-YEPDDARVTELYRRFWQALKPGGALVTSFLTPPP 232 (305)
T ss_dssp EEEECCSSGG-GCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCT
T ss_pred EEEEECChhh-hcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCC
Confidence 9999743111 1222222345899999999999999998766543
No 77
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.25 E-value=6.3e-11 Score=107.64 Aligned_cols=104 Identities=16% Similarity=0.139 Sum_probs=85.9
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|.++..+.+.+|+.+++++|+++.+++.|++.. ++++++.+|+.++. .+++||
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~------------~~~~~~~~d~~~~~--~~~~fD 97 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL------------PNTNFGKADLATWK--PAQKAD 97 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS------------TTSEEEECCTTTCC--CSSCEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------------CCcEEEECChhhcC--ccCCcC
Confidence 4678999999999999999998888899999999999999999872 35889999998864 567899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
+|++...-. ..+ ....+++++++.|+|||.+++..+..
T Consensus 98 ~v~~~~~l~-~~~---~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 98 LLYANAVFQ-WVP---DHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp EEEEESCGG-GST---THHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred EEEEeCchh-hCC---CHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 999843221 111 24678999999999999999987654
No 78
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.25 E-value=1.7e-11 Score=113.77 Aligned_cols=108 Identities=14% Similarity=0.058 Sum_probs=86.7
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
++.+||+||||+|.++..+.+. +.++++||+++.+++.|++.+.... ..++++++.+|+.+.....+++||+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~------~~~~v~~~~~d~~~~~~~~~~~fD~ 139 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKG------VSDNMQFIHCAAQDVASHLETPVDL 139 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-C------CGGGEEEEESCGGGTGGGCSSCEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcC------CCcceEEEEcCHHHhhhhcCCCceE
Confidence 4679999999999999999876 6799999999999999999875332 1368999999999876456789999
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
|++...-. .++ ...++++.+++.|+|||.+++....
T Consensus 140 v~~~~~l~-~~~---~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 140 ILFHAVLE-WVA---DPRSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp EEEESCGG-GCS---CHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred EEECchhh-ccc---CHHHHHHHHHHHcCCCeEEEEEEeC
Confidence 99853221 122 2267999999999999999987754
No 79
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.24 E-value=2.4e-11 Score=107.07 Aligned_cols=103 Identities=12% Similarity=0.008 Sum_probs=85.0
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
++.+||++|||+|..+..+.+.+|+.+++++|++|.+++.|++.+.... -++++++.+|+.++. ..++||+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-------~~~v~~~~~d~~~~~--~~~~~D~ 135 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELK-------LENIEPVQSRVEEFP--SEPPFDG 135 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT-------CSSEEEEECCTTTSC--CCSCEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcC-------CCCeEEEecchhhCC--ccCCcCE
Confidence 4679999999999999999988889999999999999999998774322 234999999998875 3578999
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
|++..+. .-..+++.+++.|+|||.+++....
T Consensus 136 i~~~~~~--------~~~~~l~~~~~~L~~gG~l~~~~~~ 167 (207)
T 1jsx_A 136 VISRAFA--------SLNDMVSWCHHLPGEQGRFYALKGQ 167 (207)
T ss_dssp EECSCSS--------SHHHHHHHHTTSEEEEEEEEEEESS
T ss_pred EEEeccC--------CHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 9975431 1357999999999999999987553
No 80
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.24 E-value=3.8e-11 Score=107.76 Aligned_cols=104 Identities=17% Similarity=0.224 Sum_probs=83.9
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|..+..+.+..+ +++++|+++.+++.|++.+. . +++++.+|+.+.. .+++||
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~----------~-~v~~~~~d~~~~~--~~~~fD 105 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLK----------D-GITYIHSRFEDAQ--LPRRYD 105 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSC----------S-CEEEEESCGGGCC--CSSCEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhh----------C-CeEEEEccHHHcC--cCCccc
Confidence 4678999999999999999987643 89999999999999999874 1 6999999998873 467899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHH-hccCCCcEEEEEecCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLK-DRLMPNGRFMVNCGGID 261 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~-~~L~pgGvlvvn~~~~~ 261 (345)
+|++...-. +++ ...+++++++ +.|+|||.+++......
T Consensus 106 ~v~~~~~l~-~~~---~~~~~l~~~~~~~LkpgG~l~i~~~~~~ 145 (250)
T 2p7i_A 106 NIVLTHVLE-HID---DPVALLKRINDDWLAEGGRLFLVCPNAN 145 (250)
T ss_dssp EEEEESCGG-GCS---SHHHHHHHHHHTTEEEEEEEEEEEECTT
T ss_pred EEEEhhHHH-hhc---CHHHHHHHHHHHhcCCCCEEEEEcCChH
Confidence 999843211 122 2368999999 99999999999876554
No 81
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.24 E-value=2.7e-11 Score=110.51 Aligned_cols=118 Identities=14% Similarity=0.018 Sum_probs=87.3
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCC-CCCCCCCCCcEEEEEccccccccc--CCCc
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSD-LEKPTATGGVLQVHIGDVFSPSED--ASGR 216 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~-~~~~~~~~~rv~v~~gDa~~~l~~--~~~~ 216 (345)
+..+||+||||+|.++..+.+..|+.++++||+++.+++.|++...... .......-++++++.+|+.+++.. ....
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 4578999999999999999998888899999999999999987653210 000000124799999999987763 4678
Q ss_pred ccEEEEcCCCCCC----CCCCcchHHHHHHHHhccCCCcEEEEEe
Q 038076 217 YAGIVVDLFSEGK----VLPQLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 217 yD~Ii~D~f~~~~----~p~~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
+|.|++...++.. .-..+...++++.+.+.|+|||.+++..
T Consensus 129 ~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 129 LSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp EEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 9999876544321 0112334689999999999999998854
No 82
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.23 E-value=7.6e-12 Score=116.79 Aligned_cols=105 Identities=10% Similarity=-0.084 Sum_probs=86.5
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+.++||++|||+|.++..+++..+. +|++||++|.+++.|+++...... ..+++++.+|+.+++. +++||
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~------~~~v~~~~~D~~~~~~--~~~fD 194 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKV------EDRMSAYNMDNRDFPG--ENIAD 194 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTC------TTTEEEECSCTTTCCC--CSCEE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCC------CceEEEEECCHHHhcc--cCCcc
Confidence 45789999999999999999987554 899999999999999998754432 3579999999999875 68899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
+|++|... ...++++.+.+.|+|||++++.....
T Consensus 195 ~Vi~~~p~--------~~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 195 RILMGYVV--------RTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp EEEECCCS--------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEEECCch--------hHHHHHHHHHHHCCCCeEEEEEEeec
Confidence 99997432 22578999999999999998866543
No 83
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.23 E-value=3.9e-11 Score=110.65 Aligned_cols=112 Identities=15% Similarity=0.107 Sum_probs=81.4
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCC-------CCCCC-C--CCCCcEEEEEcccccc
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLS-------DLEKP-T--ATGGVLQVHIGDVFSP 209 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~-------~~~~~-~--~~~~rv~v~~gDa~~~ 209 (345)
++.+||++|||+|..+.+|.+. +.+|++||++|.+++.|++..+.. ...+. . ...++++++++|+.+.
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 5679999999999999999875 579999999999999998766431 00000 0 0146899999999986
Q ss_pred cccCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 210 SEDASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 210 l~~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
-....++||+|+.-..- ..++.. ....+++.+++.|+|||++++
T Consensus 146 ~~~~~~~FD~V~~~~~l-~~l~~~-~~~~~l~~~~~~LkpGG~l~l 189 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGAL-VAINPG-DHDRYADIILSLLRKEFQYLV 189 (252)
T ss_dssp GGGCCCCEEEEEESSST-TTSCGG-GHHHHHHHHHHTEEEEEEEEE
T ss_pred CcccCCCEEEEEEhhhh-hhCCHH-HHHHHHHHHHHHcCCCeEEEE
Confidence 43223799999963211 123322 345789999999999999864
No 84
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.23 E-value=4.7e-11 Score=111.13 Aligned_cols=109 Identities=19% Similarity=0.221 Sum_probs=88.4
Q ss_pred ccCCCCCEEEEeecccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCC
Q 038076 137 AIVPNGPIAIYGLGGGTAAHLMLDLWP-SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASG 215 (345)
Q Consensus 137 ~~~~p~~VLiIG~G~G~~~~~l~~~~p-~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~ 215 (345)
...++.+||+||||+|..+..+.+.+| +.+|+++|++|.+++.|++.+... .++++++++|+.++.. ++
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--------~~~v~~~~~d~~~~~~--~~ 88 (284)
T 3gu3_A 19 KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL--------PYDSEFLEGDATEIEL--ND 88 (284)
T ss_dssp CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS--------SSEEEEEESCTTTCCC--SS
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc--------CCceEEEEcchhhcCc--CC
Confidence 345788999999999999999998888 489999999999999999987532 3489999999998642 56
Q ss_pred cccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 216 RYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+||+|++...-. .++ ...++++++++.|+|||.+++....
T Consensus 89 ~fD~v~~~~~l~-~~~---~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 89 KYDIAICHAFLL-HMT---TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CEEEEEEESCGG-GCS---SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CeeEEEECChhh-cCC---CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 899999864322 122 2368999999999999999976654
No 85
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.23 E-value=2e-11 Score=113.00 Aligned_cols=101 Identities=12% Similarity=0.103 Sum_probs=80.7
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
...+||+||||+|..+..+.++ ..+|++||+++.|++.|++ .++++++++|+.+. .-.+++||+
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~--~~~v~gvD~s~~ml~~a~~-------------~~~v~~~~~~~e~~-~~~~~sfD~ 102 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEF--FERVHAVDPGEAQIRQALR-------------HPRVTYAVAPAEDT-GLPPASVDV 102 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTT--CSEEEEEESCHHHHHTCCC-------------CTTEEEEECCTTCC-CCCSSCEEE
T ss_pred CCCCEEEEcCCCCHHHHHHHHh--CCEEEEEeCcHHhhhhhhh-------------cCCceeehhhhhhh-cccCCcccE
Confidence 4578999999999999999875 4689999999999987654 35799999999874 345789999
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
|++-..- ..+....+++++++.|+|||++++..+...
T Consensus 103 v~~~~~~-----h~~~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 103 AIAAQAM-----HWFDLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp EEECSCC-----TTCCHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred EEEeeeh-----hHhhHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 9983211 122346799999999999999988776544
No 86
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.23 E-value=2e-11 Score=114.40 Aligned_cols=118 Identities=14% Similarity=0.154 Sum_probs=84.5
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCC---------------------------
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEK--------------------------- 191 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~--------------------------- 191 (345)
.++++||+||||+|.++..+++.++..+|++||||+.+++.|++.........
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 46789999999999999999999888999999999999999998764211000
Q ss_pred ------------------------CCCCCCcEEEEEccccccc----ccCCCcccEEEEcCCCCCCCC---CCcchHHHH
Q 038076 192 ------------------------PTATGGVLQVHIGDVFSPS----EDASGRYAGIVVDLFSEGKVL---PQLEEVATW 240 (345)
Q Consensus 192 ------------------------~~~~~~rv~v~~gDa~~~l----~~~~~~yD~Ii~D~f~~~~~p---~~l~t~ef~ 240 (345)
......+++++.+|..... ....++||+|++..... .+. ..-.-.+++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~-~ihl~~~~~~~~~~l 203 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTK-WVHLNWGDEGLKRMF 203 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHH-HHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHH-HhhhcCCHHHHHHHH
Confidence 0001158999999987542 12468999999842110 000 000335789
Q ss_pred HHHHhccCCCcEEEEEe
Q 038076 241 LKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 241 ~~~~~~L~pgGvlvvn~ 257 (345)
+.+++.|+|||.+++..
T Consensus 204 ~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 204 RRIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHHEEEEEEEEEEC
T ss_pred HHHHHHhCCCcEEEEec
Confidence 99999999999999854
No 87
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.22 E-value=4.6e-11 Score=104.89 Aligned_cols=105 Identities=19% Similarity=0.209 Sum_probs=84.4
Q ss_pred CCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccEE
Q 038076 141 NGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAGI 220 (345)
Q Consensus 141 p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~I 220 (345)
+.+||+||||+|.++..+.+. +.++++||+++.+++.|++.+ ++++++.+|+.++ ...+++||+|
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~------------~~~~~~~~d~~~~-~~~~~~fD~v 106 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTH------------PSVTFHHGTITDL-SDSPKRWAGL 106 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHC------------TTSEEECCCGGGG-GGSCCCEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhC------------CCCeEEeCccccc-ccCCCCeEEE
Confidence 789999999999999999876 569999999999999999874 3588999999885 3456899999
Q ss_pred EEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 221 VVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 221 i~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
++...-. ..+ .-...++++.+++.|+|||.+++.......
T Consensus 107 ~~~~~l~-~~~-~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 146 (203)
T 3h2b_A 107 LAWYSLI-HMG-PGELPDALVALRMAVEDGGGLLMSFFSGPS 146 (203)
T ss_dssp EEESSST-TCC-TTTHHHHHHHHHHTEEEEEEEEEEEECCSS
T ss_pred EehhhHh-cCC-HHHHHHHHHHHHHHcCCCcEEEEEEccCCc
Confidence 9853221 122 113468999999999999999998876553
No 88
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.22 E-value=1.5e-11 Score=109.13 Aligned_cols=112 Identities=12% Similarity=0.051 Sum_probs=79.4
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCC----C-CCCCCCcEEEEEcccccccccC
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLE----K-PTATGGVLQVHIGDVFSPSEDA 213 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~----~-~~~~~~rv~v~~gDa~~~l~~~ 213 (345)
.++.+||++|||+|..+.++.+. +.+|++||+++.|++.|++........ + ..+..++++++++|+.+.-...
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~ 98 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 98 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence 45689999999999999999886 579999999999999999886531000 0 0001367999999998863211
Q ss_pred CCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEE
Q 038076 214 SGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFM 254 (345)
Q Consensus 214 ~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlv 254 (345)
.++||+|++-..- ..++. -....+++++++.|+|||.++
T Consensus 99 ~~~fD~v~~~~~l-~~l~~-~~~~~~l~~~~r~LkpgG~~~ 137 (203)
T 1pjz_A 99 IGHCAAFYDRAAM-IALPA-DMRERYVQHLEALMPQACSGL 137 (203)
T ss_dssp HHSEEEEEEESCG-GGSCH-HHHHHHHHHHHHHSCSEEEEE
T ss_pred CCCEEEEEECcch-hhCCH-HHHHHHHHHHHHHcCCCcEEE
Confidence 2689999963211 11221 123468999999999999833
No 89
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.22 E-value=4.6e-11 Score=108.68 Aligned_cols=110 Identities=12% Similarity=0.106 Sum_probs=86.5
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|..+..+.+.+ +.+|++||+++.+++.|++.+.. .++++++.+|+.+. ...+++||
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~---------~~~~~~~~~d~~~~-~~~~~~fD 122 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSG---------NNKIIFEANDILTK-EFPENNFD 122 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCS---------CTTEEEEECCTTTC-CCCTTCEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhc---------CCCeEEEECccccC-CCCCCcEE
Confidence 456799999999999999999865 68999999999999999998752 26899999999885 33568999
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
+|++...-. .++ .-...++++++++.|+|||.+++......
T Consensus 123 ~v~~~~~l~-~~~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (266)
T 3ujc_A 123 LIYSRDAIL-ALS-LENKNKLFQKCYKWLKPTGTLLITDYCAT 163 (266)
T ss_dssp EEEEESCGG-GSC-HHHHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred EEeHHHHHH-hcC-hHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 999842111 111 11346789999999999999998765433
No 90
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.22 E-value=9.5e-11 Score=106.50 Aligned_cols=105 Identities=12% Similarity=0.072 Sum_probs=84.4
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|..+..+.+..+ .+++++|+++.+++.|++.+. .++++++.+|+.+. ...+++||
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~----------~~~~~~~~~d~~~~-~~~~~~fD 110 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGA-KKVLGIDLSERMLTEAKRKTT----------SPVVCYEQKAIEDI-AIEPDAYN 110 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHCC----------CTTEEEEECCGGGC-CCCTTCEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhhc----------cCCeEEEEcchhhC-CCCCCCeE
Confidence 3678999999999999999988643 499999999999999999875 35799999999874 33468999
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+|++...-. .++ ...++++++++.|+|||.+++.+..
T Consensus 111 ~v~~~~~l~-~~~---~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 111 VVLSSLALH-YIA---SFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp EEEEESCGG-GCS---CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEchhhh-hhh---hHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 999853211 111 2468999999999999999987544
No 91
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.22 E-value=4.3e-11 Score=103.07 Aligned_cols=106 Identities=17% Similarity=0.060 Sum_probs=85.0
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
..++.+||++|||+|..+..+.+.. .+++++|+++.+++.|++.+.... ..++++++.+|+.+.+.. .++|
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~------~~~~~~~~~~d~~~~~~~-~~~~ 101 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHG------LGDNVTLMEGDAPEALCK-IPDI 101 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTT------CCTTEEEEESCHHHHHTT-SCCE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcC------CCcceEEEecCHHHhccc-CCCC
Confidence 3467899999999999999998765 899999999999999999774322 136899999999885543 2589
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
|+|+++.... ...++++.+.+.|+|||.+++....
T Consensus 102 D~v~~~~~~~-------~~~~~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 102 DIAVVGGSGG-------ELQEILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp EEEEESCCTT-------CHHHHHHHHHHTEEEEEEEEEEECB
T ss_pred CEEEECCchH-------HHHHHHHHHHHhcCCCcEEEEEecC
Confidence 9999864321 2378999999999999999987764
No 92
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.22 E-value=3e-11 Score=112.10 Aligned_cols=103 Identities=18% Similarity=0.142 Sum_probs=85.4
Q ss_pred CCCCCEEEEeecccHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHhcCCC-CCCCCCCCCCcEEEEEcccccccccCCCc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDL-WPSLKLEGWEIDEILIDKVRDYFGLS-DLEKPTATGGVLQVHIGDVFSPSEDASGR 216 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~-~p~~~v~~VEidp~vi~~A~~~f~~~-~~~~~~~~~~rv~v~~gDa~~~l~~~~~~ 216 (345)
.+..+||++|||+|.++..+.+. .|+.+|+++|+++.+++.|++++... . .++++++.+|+.+.+ .+++
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g-------~~~v~~~~~d~~~~~--~~~~ 179 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD-------IGNVRTSRSDIADFI--SDQM 179 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC-------CTTEEEECSCTTTCC--CSCC
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC-------CCcEEEEECchhccC--cCCC
Confidence 45679999999999999999987 67899999999999999999987422 1 257999999998854 3478
Q ss_pred ccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 217 YAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
||+|++|..+. .++++.+.+.|+|||.+++....
T Consensus 180 fD~Vi~~~~~~---------~~~l~~~~~~LkpgG~l~i~~~~ 213 (275)
T 1yb2_A 180 YDAVIADIPDP---------WNHVQKIASMMKPGSVATFYLPN 213 (275)
T ss_dssp EEEEEECCSCG---------GGSHHHHHHTEEEEEEEEEEESS
T ss_pred ccEEEEcCcCH---------HHHHHHHHHHcCCCCEEEEEeCC
Confidence 99999964321 36899999999999999988754
No 93
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.21 E-value=6.6e-12 Score=106.71 Aligned_cols=107 Identities=10% Similarity=-0.101 Sum_probs=83.5
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc---CCCc
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED---ASGR 216 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~---~~~~ 216 (345)
+..+||++|||+|..+..+.+..+ +++++|+|+.+++.|++++.... .+++++.+|+.+++.. ..++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~ 110 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW--EAVLVEKDPEAVRLLKENVRRTG--------LGARVVALPVEVFLPEAKAQGER 110 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC--EEEEECCCHHHHHHHHHHHHHHT--------CCCEEECSCHHHHHHHHHHTTCC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHcC--------CceEEEeccHHHHHHhhhccCCc
Confidence 578999999999999999988644 49999999999999999875321 1789999999986543 2358
Q ss_pred ccEEEEcCCCCCCCCCCcchHHHHHHHH--hccCCCcEEEEEecCCCC
Q 038076 217 YAGIVVDLFSEGKVLPQLEEVATWLKLK--DRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~l~t~ef~~~~~--~~L~pgGvlvvn~~~~~~ 262 (345)
||+|++|..-. . ...++++.+. +.|+|||++++.+.....
T Consensus 111 ~D~i~~~~~~~-~-----~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 111 FTVAFMAPPYA-M-----DLAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp EEEEEECCCTT-S-----CTTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred eEEEEECCCCc-h-----hHHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 99999975321 1 2235677776 999999999998876554
No 94
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.21 E-value=9.7e-11 Score=108.55 Aligned_cols=110 Identities=13% Similarity=0.007 Sum_probs=84.8
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+||+||||+|..+..+.+.++ .+|+++|+++.+++.|++.+.... ..++++++.+|+.++ +++||
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~------~~~~~~~~~~d~~~~----~~~fD 131 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSE------NLRSKRVLLAGWEQF----DEPVD 131 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCC------CCSCEEEEESCGGGC----CCCCS
T ss_pred CCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcC------CCCCeEEEECChhhC----CCCee
Confidence 4567999999999999999986554 599999999999999999874322 146899999999775 28899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
+|++...-. .++. -...++++++++.|+|||.+++......
T Consensus 132 ~v~~~~~l~-~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 132 RIVSIGAFE-HFGH-ERYDAFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp EEEEESCGG-GTCT-TTHHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred EEEEeCchh-hcCh-HHHHHHHHHHHHhcCCCCEEEEEEecCC
Confidence 999742111 1111 1346899999999999999998776544
No 95
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.20 E-value=2.2e-10 Score=101.18 Aligned_cols=106 Identities=18% Similarity=0.162 Sum_probs=82.4
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
+.++.+||+||||+|.++..+.+. +.+++++|+++.+++.|++.++ ++++.+|+...- ..++|
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~-------------~~~~~~d~~~~~--~~~~f 103 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRLG-------------RPVRTMLFHQLD--AIDAY 103 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHT-------------SCCEECCGGGCC--CCSCE
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhcC-------------CceEEeeeccCC--CCCcE
Confidence 345789999999999999999875 5799999999999999999873 456778888754 67899
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
|+|++...-. ..+ .-.-..+++.+++.|+|||.+++.+.....
T Consensus 104 D~v~~~~~l~-~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 146 (211)
T 3e23_A 104 DAVWAHACLL-HVP-RDELADVLKLIWRALKPGGLFYASYKSGEG 146 (211)
T ss_dssp EEEEECSCGG-GSC-HHHHHHHHHHHHHHEEEEEEEEEEEECCSS
T ss_pred EEEEecCchh-hcC-HHHHHHHHHHHHHhcCCCcEEEEEEcCCCc
Confidence 9999842111 111 012357899999999999999998765543
No 96
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.20 E-value=3.3e-11 Score=106.95 Aligned_cols=112 Identities=10% Similarity=-0.013 Sum_probs=88.2
Q ss_pred CCCCCEEEEeecccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLW-PSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~-p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
.++.+||+||||+|..+..+.+.. |..+++++|+++.+++.|++.+.... .++++++.+|+.+.- ..+++|
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~~~~d~~~~~-~~~~~f 107 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLG-------LKNVEVLKSEENKIP-LPDNTV 107 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHT-------CTTEEEEECBTTBCS-SCSSCE
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC-------CCcEEEEecccccCC-CCCCCe
Confidence 456799999999999999999875 67899999999999999999874222 247999999998752 346789
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
|+|++...-. ..+ ...++++++++.|+|||.+++..+....
T Consensus 108 D~v~~~~~l~-~~~---~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 148 (219)
T 3dh0_A 108 DFIFMAFTFH-ELS---EPLKFLEELKRVAKPFAYLAIIDWKKEE 148 (219)
T ss_dssp EEEEEESCGG-GCS---SHHHHHHHHHHHEEEEEEEEEEEECSSC
T ss_pred eEEEeehhhh-hcC---CHHHHHHHHHHHhCCCeEEEEEEecccc
Confidence 9999853221 111 2368999999999999999987665543
No 97
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.20 E-value=4.9e-11 Score=111.56 Aligned_cols=108 Identities=14% Similarity=-0.007 Sum_probs=85.6
Q ss_pred CCCCCEEEEeecccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccC----
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLW-PSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDA---- 213 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~-p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~---- 213 (345)
.++.+||+||||+|..+..+.+.+ +..+|++||++|.+++.|++.+.... ...++++++++|+.+.-...
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-----~~~~~v~~~~~d~~~~~~~~~~~~ 109 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSP-----DTYKNVSFKISSSDDFKFLGADSV 109 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC------CCTTEEEEECCTTCCGGGCTTTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcc-----CCCCceEEEEcCHHhCCccccccc
Confidence 367899999999999999999875 78999999999999999999874220 01468999999998853222
Q ss_pred -CCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 214 -SGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 214 -~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
.++||+|++...- .++.-.++++++++.|+|||.+++.
T Consensus 110 ~~~~fD~V~~~~~l-----~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 110 DKQKIDMITAVECA-----HWFDFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp TSSCEEEEEEESCG-----GGSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCeeEEeHhhHH-----HHhCHHHHHHHHHHhcCCCcEEEEE
Confidence 2789999985321 1224568999999999999999883
No 98
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.20 E-value=3.9e-11 Score=106.74 Aligned_cols=108 Identities=19% Similarity=0.208 Sum_probs=83.9
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|..+..+.+..+ +++++|++|.+++.|++.+... .++++++.+|+.+. ...+++||
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~--------~~~~~~~~~d~~~~-~~~~~~~D 105 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSR--------ESNVEFIVGDARKL-SFEDKTFD 105 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT--------TCCCEEEECCTTSC-CSCTTCEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc--------CCCceEEECchhcC-CCCCCcEE
Confidence 4578999999999999999988755 9999999999999999987422 36799999999874 23457899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+|++...-... ..-...++++.+++.|+|||.+++....
T Consensus 106 ~v~~~~~~~~~--~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 106 YVIFIDSIVHF--EPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp EEEEESCGGGC--CHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEcCchHhC--CHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 99986321000 0012357899999999999999987664
No 99
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.20 E-value=1.2e-10 Score=109.71 Aligned_cols=111 Identities=14% Similarity=0.054 Sum_probs=86.4
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+||+||||+|.++..+.+.+ +.+|+++|+++.+++.|++.+.... ..++++++.+|+.++ +++||
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~------~~~~v~~~~~d~~~~----~~~fD 157 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASID------TNRSRQVLLQGWEDF----AEPVD 157 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSC------CSSCEEEEESCGGGC----CCCCS
T ss_pred CCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcC------CCCceEEEECChHHC----CCCcC
Confidence 456799999999999999998765 5699999999999999999875322 136799999999775 37899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
+|++...-. .++. -...++++++.+.|+|||.+++.......
T Consensus 158 ~v~~~~~l~-~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 158 RIVSIEAFE-HFGH-ENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp EEEEESCGG-GTCG-GGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred EEEEeChHH-hcCH-HHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 999752111 1111 13468999999999999999988776543
No 100
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.20 E-value=1.5e-10 Score=107.42 Aligned_cols=111 Identities=15% Similarity=0.090 Sum_probs=86.3
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||++|||+|.++..+.+..|+.+++++|+++.+++.|+++..... -++++++.+|..+.+. .++||
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~-------~~~v~~~~~d~~~~~~--~~~fD 178 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLA-------IKNIHILQSDWFSALA--GQQFA 178 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHT-------CCSEEEECCSTTGGGT--TCCEE
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-------CCceEEEEcchhhhcc--cCCcc
Confidence 45679999999999999999988899999999999999999998874221 2379999999988653 56899
Q ss_pred EEEEcCCCCCC------------CCC-Cc--------chHHHHHHHHhccCCCcEEEEEec
Q 038076 219 GIVVDLFSEGK------------VLP-QL--------EEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 219 ~Ii~D~f~~~~------------~p~-~l--------~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
+|+++..-... .|. .+ .-.++++.+.+.|+|||.+++...
T Consensus 179 ~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~ 239 (276)
T 2b3t_A 179 MIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG 239 (276)
T ss_dssp EEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred EEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 99997432110 010 01 236788999999999999998754
No 101
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.20 E-value=1e-10 Score=107.41 Aligned_cols=109 Identities=9% Similarity=0.063 Sum_probs=85.3
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|..+..+.+.. +.+|+++|+++.+++.|++.+.... ..++++++.+|+.+. ...+++||
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~------~~~~~~~~~~d~~~~-~~~~~~fD 131 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAG------LANRVTFSYADAMDL-PFEDASFD 131 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTT------CTTTEEEEECCTTSC-CSCTTCEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcC------CCcceEEEECccccC-CCCCCCcc
Confidence 467899999999999999998865 6899999999999999998874322 135799999999874 33467899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+|++...-. .++ ...++++++++.|+|||.+++....
T Consensus 132 ~v~~~~~l~-~~~---~~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 132 AVWALESLH-HMP---DRGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp EEEEESCTT-TSS---CHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred EEEEechhh-hCC---CHHHHHHHHHHHcCCCeEEEEEEee
Confidence 999742211 122 2368999999999999999886544
No 102
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.20 E-value=4.5e-11 Score=109.21 Aligned_cols=106 Identities=12% Similarity=0.137 Sum_probs=82.3
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|.++..+.+.. .+++++|+++.+++.|++.+.... .++++++.+|+.+. ...+++||
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~-------~~~v~~~~~d~~~l-~~~~~~fD 105 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGNG-------HQQVEYVQGDAEQM-PFTDERFH 105 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTT-------CCSEEEEECCC-CC-CSCTTCEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcC-------CCceEEEEecHHhC-CCCCCCEE
Confidence 467899999999999999998865 399999999999999998874221 25799999999874 33568999
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
+|++..... ..+ ....+++++++.|+|||.+++...
T Consensus 106 ~V~~~~~l~-~~~---d~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 106 IVTCRIAAH-HFP---NPASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp EEEEESCGG-GCS---CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEhhhhH-hcC---CHHHHHHHHHHHcCCCCEEEEEEc
Confidence 999853221 122 235899999999999999988543
No 103
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.19 E-value=1.1e-10 Score=99.78 Aligned_cols=115 Identities=8% Similarity=-0.037 Sum_probs=90.9
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||++|||+|.++..+.+ +..+++++|+++.+++.|++.+.... -++++++.+|+.+.+. +++||
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~-------~~~~~~~~~d~~~~~~--~~~~D 102 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFN-------IKNCQIIKGRAEDVLD--KLEFN 102 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTT-------CCSEEEEESCHHHHGG--GCCCS
T ss_pred CCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcC-------CCcEEEEECCcccccc--CCCCc
Confidence 4567999999999999999987 77899999999999999999874322 2579999999988554 37899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAF 293 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F 293 (345)
+|+++.. ....++++.+++. |||.+++...... ....+.+.+++..
T Consensus 103 ~i~~~~~--------~~~~~~l~~~~~~--~gG~l~~~~~~~~-------------------~~~~~~~~l~~~g 148 (183)
T 2yxd_A 103 KAFIGGT--------KNIEKIIEILDKK--KINHIVANTIVLE-------------------NAAKIINEFESRG 148 (183)
T ss_dssp EEEECSC--------SCHHHHHHHHHHT--TCCEEEEEESCHH-------------------HHHHHHHHHHHTT
T ss_pred EEEECCc--------ccHHHHHHHHhhC--CCCEEEEEecccc-------------------cHHHHHHHHHHcC
Confidence 9998654 2346788888888 9999998875433 2456677777664
No 104
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.19 E-value=4.3e-11 Score=108.87 Aligned_cols=104 Identities=15% Similarity=0.170 Sum_probs=84.8
Q ss_pred CCCCCEEEEeecccHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHhcCCC-CCCCCCCCCCcEEEEEcccccccccCCCc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDL-WPSLKLEGWEIDEILIDKVRDYFGLS-DLEKPTATGGVLQVHIGDVFSPSEDASGR 216 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~-~p~~~v~~VEidp~vi~~A~~~f~~~-~~~~~~~~~~rv~v~~gDa~~~l~~~~~~ 216 (345)
.+..+||++|||+|.++..+++. .|..+++++|+++.+++.|++.+... . .++++++.+|+.+. .-.+++
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-------~~~v~~~~~d~~~~-~~~~~~ 166 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-------VENVRFHLGKLEEA-ELEEAA 166 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-------CCCEEEEESCGGGC-CCCTTC
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-------CCCEEEEECchhhc-CCCCCC
Confidence 46679999999999999999987 56889999999999999999987311 1 25799999999886 113468
Q ss_pred ccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 217 YAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
||+|++|..+. .++++.+.+.|+|||.+++....
T Consensus 167 ~D~v~~~~~~~---------~~~l~~~~~~L~~gG~l~~~~~~ 200 (258)
T 2pwy_A 167 YDGVALDLMEP---------WKVLEKAALALKPDRFLVAYLPN 200 (258)
T ss_dssp EEEEEEESSCG---------GGGHHHHHHHEEEEEEEEEEESC
T ss_pred cCEEEECCcCH---------HHHHHHHHHhCCCCCEEEEEeCC
Confidence 99999975321 36899999999999999987754
No 105
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.19 E-value=5.1e-11 Score=112.35 Aligned_cols=111 Identities=11% Similarity=0.101 Sum_probs=87.0
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
+.+..+||+||||.|.++..+.+.+ +.+|++||+++.+++.|++.+..... .++++++.+|+.+. ...+++|
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~------~~~v~~~~~d~~~~-~~~~~~f 186 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRI------DDHVRSRVCNMLDT-PFDKGAV 186 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTC------TTTEEEEECCTTSC-CCCTTCE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCC------CCceEEEECChhcC-CCCCCCE
Confidence 3466899999999999999998864 58999999999999999998743221 35899999999874 3346899
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
|+|++...- .++-..++++.+++.|+|||.+++..+...
T Consensus 187 D~V~~~~~l-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 225 (312)
T 3vc1_A 187 TASWNNEST-----MYVDLHDLFSEHSRFLKVGGRYVTITGCWN 225 (312)
T ss_dssp EEEEEESCG-----GGSCHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred eEEEECCch-----hhCCHHHHHHHHHHHcCCCcEEEEEEcccc
Confidence 999973211 112267899999999999999988665443
No 106
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.19 E-value=8.3e-11 Score=104.39 Aligned_cols=106 Identities=15% Similarity=0.130 Sum_probs=82.9
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|..+..+.+. +.+++++|+++.+++.|++.+. ++++++.+|+.++.. . ++||
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~-----------~~~~~~~~d~~~~~~-~-~~fD 108 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP-----------KEFSITEGDFLSFEV-P-TSID 108 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC-----------TTCCEESCCSSSCCC-C-SCCS
T ss_pred cCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC-----------CceEEEeCChhhcCC-C-CCeE
Confidence 36789999999999999999875 6799999999999999999874 358899999988632 2 8999
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
+|++...-. .++ .....++++++++.|+|||.+++......
T Consensus 109 ~v~~~~~l~-~~~-~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 149 (220)
T 3hnr_A 109 TIVSTYAFH-HLT-DDEKNVAIAKYSQLLNKGGKIVFADTIFA 149 (220)
T ss_dssp EEEEESCGG-GSC-HHHHHHHHHHHHHHSCTTCEEEEEEECBS
T ss_pred EEEECcchh-cCC-hHHHHHHHHHHHHhcCCCCEEEEEecccc
Confidence 999853221 111 11223489999999999999998865433
No 107
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.19 E-value=8.6e-11 Score=109.29 Aligned_cols=117 Identities=11% Similarity=0.007 Sum_probs=89.7
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc---CC
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPS-LKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED---AS 214 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~-~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~---~~ 214 (345)
.+..+||++|||+|..+..+.+..++ .+|+++|+++.+++.++++..... -++++++.+|+.++... ..
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g-------~~~v~~~~~D~~~~~~~~~~~~ 154 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMG-------VLNTIIINADMRKYKDYLLKNE 154 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTT-------CCSEEEEESCHHHHHHHHHHTT
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhC-------CCcEEEEeCChHhcchhhhhcc
Confidence 35678999999999999999987666 899999999999999998874222 23799999999987532 25
Q ss_pred CcccEEEEcCCCCC-CCCC-------------CcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 215 GRYAGIVVDLFSEG-KVLP-------------QLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~-~~p~-------------~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
++||+|++|....+ +... .-...++++.+.+.|+|||.+++...+...
T Consensus 155 ~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~ 216 (274)
T 3ajd_A 155 IFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEV 216 (274)
T ss_dssp CCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCT
T ss_pred ccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCCh
Confidence 78999999975432 1100 012368899999999999999987765544
No 108
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.19 E-value=2.7e-11 Score=106.77 Aligned_cols=103 Identities=14% Similarity=0.151 Sum_probs=83.0
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||++|||+|.++..+.+ .+..+++++|+++.+++.|++++.... .++++++.+|+.++. +++||
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~-------~~~v~~~~~d~~~~~---~~~fD 127 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHK-LGAKSVLATDISDESMTAAEENAALNG-------IYDIALQKTSLLADV---DGKFD 127 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTT-------CCCCEEEESSTTTTC---CSCEE
T ss_pred cCCCEEEEECCCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHcC-------CCceEEEeccccccC---CCCce
Confidence 4568999999999999999876 466799999999999999999875332 123999999998864 57899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+|+++... + ...++++.+++.|+|||.+++....
T Consensus 128 ~i~~~~~~------~-~~~~~l~~~~~~L~~gG~l~~~~~~ 161 (205)
T 3grz_A 128 LIVANILA------E-ILLDLIPQLDSHLNEDGQVIFSGID 161 (205)
T ss_dssp EEEEESCH------H-HHHHHGGGSGGGEEEEEEEEEEEEE
T ss_pred EEEECCcH------H-HHHHHHHHHHHhcCCCCEEEEEecC
Confidence 99986422 1 2367899999999999999986543
No 109
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.19 E-value=3.3e-11 Score=110.33 Aligned_cols=105 Identities=19% Similarity=0.173 Sum_probs=81.7
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|.++..+.+. +.+++++|+++.+++.|++.+. +++++.+|+.++.. +++||
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~------------~~~~~~~d~~~~~~--~~~fD 112 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS--FGTVEGLELSADMLAIARRRNP------------DAVLHHGDMRDFSL--GRRFS 112 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT--SSEEEEEESCHHHHHHHHHHCT------------TSEEEECCTTTCCC--SCCEE
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhCC------------CCEEEECChHHCCc--cCCcC
Confidence 35689999999999999999875 4689999999999999999752 58899999998632 68999
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+|++....-..++..-....+++++++.|+|||.+++..+.
T Consensus 113 ~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 153 (263)
T 3pfg_A 113 AVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWW 153 (263)
T ss_dssp EEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred EEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 99984211111211113357899999999999999997543
No 110
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.19 E-value=4.6e-11 Score=107.13 Aligned_cols=107 Identities=18% Similarity=0.181 Sum_probs=82.4
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|..+..+.+..+ +++++|+++.+++.|++.+ ++++++.+|+.++. .+++||
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~------------~~~~~~~~d~~~~~--~~~~~D 102 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRL------------PDATLHQGDMRDFR--LGRKFS 102 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHC------------TTCEEEECCTTTCC--CSSCEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhC------------CCCEEEECCHHHcc--cCCCCc
Confidence 4578999999999999999988754 8999999999999999975 24889999998853 267899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
+|++....-...+..-...++++.+++.|+|||.+++..+...
T Consensus 103 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 103 AVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp EEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred EEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCc
Confidence 9996221111122112336789999999999999998765543
No 111
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.19 E-value=1.5e-10 Score=104.06 Aligned_cols=107 Identities=20% Similarity=0.164 Sum_probs=86.3
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|..+..+.+. +.+++++|+++.+++.|++... .++++++.+|+.+. ...+++||
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~----------~~~~~~~~~d~~~~-~~~~~~fD 118 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGE----------GPDLSFIKGDLSSL-PFENEQFE 118 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTC----------BTTEEEEECBTTBC-SSCTTCEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcc----------cCCceEEEcchhcC-CCCCCCcc
Confidence 46789999999999999999886 6799999999999999998752 46799999999885 33478999
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
+|++...-. ..+ ...++++.+++.|+|||.+++.......
T Consensus 119 ~v~~~~~l~-~~~---~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 158 (242)
T 3l8d_A 119 AIMAINSLE-WTE---EPLRALNEIKRVLKSDGYACIAILGPTA 158 (242)
T ss_dssp EEEEESCTT-SSS---CHHHHHHHHHHHEEEEEEEEEEEECTTC
T ss_pred EEEEcChHh-hcc---CHHHHHHHHHHHhCCCeEEEEEEcCCcc
Confidence 999843221 121 2358999999999999999998765544
No 112
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.18 E-value=2.9e-11 Score=106.34 Aligned_cols=122 Identities=13% Similarity=0.050 Sum_probs=86.4
Q ss_pred HHHHHhhccccCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccc
Q 038076 128 YWDEFVSLPAIVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVF 207 (345)
Q Consensus 128 Y~~~~~~l~~~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~ 207 (345)
|.+.+..+....++.+||++|||+|..+..++.. ++.+++++|+++.+++.|++.+... .++++++.+|+.
T Consensus 11 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~--------~~~~~~~~~d~~ 81 (209)
T 2p8j_A 11 LYRFLKYCNESNLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSREN--------NFKLNISKGDIR 81 (209)
T ss_dssp HHHHHHHHHHSSSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHH--------TCCCCEEECCTT
T ss_pred HHHHHHHHhccCCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhc--------CCceEEEECchh
Confidence 3333333333456789999999999875444433 5679999999999999999886421 356889999998
Q ss_pred cccccCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 208 SPSEDASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 208 ~~l~~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
+. ...+++||+|++...- .+.+ .-....+++.+++.|+|||.+++...+..
T Consensus 82 ~~-~~~~~~fD~v~~~~~l-~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 132 (209)
T 2p8j_A 82 KL-PFKDESMSFVYSYGTI-FHMR-KNDVKEAIDEIKRVLKPGGLACINFLTTK 132 (209)
T ss_dssp SC-CSCTTCEEEEEECSCG-GGSC-HHHHHHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred hC-CCCCCceeEEEEcChH-HhCC-HHHHHHHHHHHHHHcCCCcEEEEEEeccc
Confidence 74 3346789999974211 0111 11346789999999999999999876544
No 113
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.18 E-value=6.6e-11 Score=106.96 Aligned_cols=107 Identities=14% Similarity=0.147 Sum_probs=83.3
Q ss_pred cccCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc-CC
Q 038076 136 PAIVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED-AS 214 (345)
Q Consensus 136 ~~~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~-~~ 214 (345)
+.+.++.+||+||||+|.++..+.+. +.+|+++|+++.+++.|++. ++++.+|+.+++.. .+
T Consensus 37 ~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~---------------~~~~~~d~~~~~~~~~~ 99 (240)
T 3dli_A 37 PYFKGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK---------------FNVVKSDAIEYLKSLPD 99 (240)
T ss_dssp GGTTTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT---------------SEEECSCHHHHHHTSCT
T ss_pred hhhcCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh---------------cceeeccHHHHhhhcCC
Confidence 33456789999999999999998886 56899999999999999874 46788899887633 56
Q ss_pred CcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 215 GRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
++||+|++...-. .++. -.-.++++++++.|+|||.+++......
T Consensus 100 ~~fD~i~~~~~l~-~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 144 (240)
T 3dli_A 100 KYLDGVMISHFVE-HLDP-ERLFELLSLCYSKMKYSSYIVIESPNPT 144 (240)
T ss_dssp TCBSEEEEESCGG-GSCG-GGHHHHHHHHHHHBCTTCCEEEEEECTT
T ss_pred CCeeEEEECCchh-hCCc-HHHHHHHHHHHHHcCCCcEEEEEeCCcc
Confidence 8999999842111 1111 1236899999999999999999887654
No 114
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.18 E-value=6.8e-11 Score=112.84 Aligned_cols=110 Identities=17% Similarity=0.202 Sum_probs=82.8
Q ss_pred cCCCCCEEEEeecccHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHhcC-------CCCCCCCCCCCCcEEEEEcccccc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDL-WPSLKLEGWEIDEILIDKVRDYFG-------LSDLEKPTATGGVLQVHIGDVFSP 209 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~-~p~~~v~~VEidp~vi~~A~~~f~-------~~~~~~~~~~~~rv~v~~gDa~~~ 209 (345)
..+..+||++|||+|.++..+++. .|..+|+++|++|.+++.|++++. +.... ...++++++.+|+.+.
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~---~~~~~v~~~~~d~~~~ 179 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVE---EWPDNVDFIHKDISGA 179 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSS---CCCCCEEEEESCTTCC
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhccccccccc---ccCCceEEEECChHHc
Confidence 346679999999999999999987 466899999999999999998764 11100 0135899999999987
Q ss_pred ccc-CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 210 SED-ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 210 l~~-~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+.. .+++||+|++|..++. .+++.+.+.|+|||.+++....
T Consensus 180 ~~~~~~~~fD~V~~~~~~~~---------~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 180 TEDIKSLTFDAVALDMLNPH---------VTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp C-------EEEEEECSSSTT---------TTHHHHGGGEEEEEEEEEEESS
T ss_pred ccccCCCCeeEEEECCCCHH---------HHHHHHHHhcCCCcEEEEEeCC
Confidence 532 3467999999764321 2688999999999999977653
No 115
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.18 E-value=4.6e-11 Score=110.77 Aligned_cols=104 Identities=15% Similarity=0.115 Sum_probs=85.2
Q ss_pred CCCCCEEEEeecccHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDL-WPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~-~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
.+..+||++|||+|.++..+++. .|..+++++|++|.+++.|++++.... ..++++++.+|+.+.+ .+++|
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~------~~~~v~~~~~d~~~~~--~~~~~ 182 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWG------LIERVTIKVRDISEGF--DEKDV 182 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTT------CGGGEEEECCCGGGCC--SCCSE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC------CCCCEEEEECCHHHcc--cCCcc
Confidence 45679999999999999999987 568999999999999999999874221 1257999999999874 34689
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
|+|++|..+. .++++.+.+.|+|||.+++....
T Consensus 183 D~V~~~~~~~---------~~~l~~~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 183 DALFLDVPDP---------WNYIDKCWEALKGGGRFATVCPT 215 (277)
T ss_dssp EEEEECCSCG---------GGTHHHHHHHEEEEEEEEEEESS
T ss_pred CEEEECCcCH---------HHHHHHHHHHcCCCCEEEEEeCC
Confidence 9999975321 36789999999999999987754
No 116
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.18 E-value=3.7e-11 Score=108.02 Aligned_cols=108 Identities=17% Similarity=0.189 Sum_probs=82.9
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+||+||||+|.++..+.+. .+++++|+++.+++.|++.+... ..+++++.+|+.+.. .+++||
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~--------~~~~~~~~~d~~~~~--~~~~fD 98 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMET--------NRHVDFWVQDMRELE--LPEPVD 98 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHT--------TCCCEEEECCGGGCC--CSSCEE
T ss_pred CCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhc--------CCceEEEEcChhhcC--CCCCcC
Confidence 45689999999999999988865 79999999999999999987421 357899999998863 247899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+|++....-...+..-...++++.+++.|+|||.+++.+..
T Consensus 99 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 99 AITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp EEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 99984211111111123457899999999999999987754
No 117
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.18 E-value=1.4e-10 Score=103.38 Aligned_cols=117 Identities=16% Similarity=0.139 Sum_probs=87.8
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+||+||||+|.++..+.+. +.+++++|+++.+++.|++........ .....+++++.+|+.+. ...+++||
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~--~~~~~~~~~~~~d~~~~-~~~~~~~D 103 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLN--QKTGGKAEFKVENASSL-SFHDSSFD 103 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCC--SSSSCEEEEEECCTTSC-CSCTTCEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCc--cccCcceEEEEeccccc-CCCCCcee
Confidence 46789999999999999999876 679999999999999999987543211 11234799999999875 33568999
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
+|++...-. .++..-...++++.+++.|+|||.+++......
T Consensus 104 ~v~~~~~l~-~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (235)
T 3sm3_A 104 FAVMQAFLT-SVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQN 145 (235)
T ss_dssp EEEEESCGG-GCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred EEEEcchhh-cCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcc
Confidence 999853221 122222233799999999999999998765443
No 118
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.18 E-value=6.2e-11 Score=113.68 Aligned_cols=115 Identities=11% Similarity=-0.042 Sum_probs=85.6
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc---CCCc
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED---ASGR 216 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~---~~~~ 216 (345)
++.+||++|||+|.++..+++. +.+|++||+|+.+++.|++++..... .+.+++++.+|+.+++.. ..++
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~--ga~V~~VD~s~~al~~a~~n~~~~gl-----~~~~v~~i~~D~~~~l~~~~~~~~~ 225 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAA--GAEVTHVDASKKAIGWAKENQVLAGL-----EQAPIRWICEDAMKFIQREERRGST 225 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHTC-----TTSCEEEECSCHHHHHHHHHHHTCC
T ss_pred CCCcEEEcccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCC-----CccceEEEECcHHHHHHHHHhcCCC
Confidence 4679999999999999999874 34999999999999999998754321 123699999999998753 2578
Q ss_pred ccEEEEcCCCCCCCC-CCc-----chHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 217 YAGIVVDLFSEGKVL-PQL-----EEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p-~~l-----~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
||+|++|...-...+ ... .-.++++.+.+.|+|||++++.+....
T Consensus 226 fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~ 276 (332)
T 2igt_A 226 YDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSI 276 (332)
T ss_dssp BSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCT
T ss_pred ceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCC
Confidence 999999864211000 000 125788999999999999776655443
No 119
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.17 E-value=5.1e-11 Score=107.25 Aligned_cols=111 Identities=22% Similarity=0.247 Sum_probs=86.4
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
++.+||+||||+|..+..+.+ ++.+|+++|+++.+++.|++.+.... ...+++++.+|+.++. ..++||+
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~------~~~~v~~~~~d~~~~~--~~~~fD~ 135 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSP------KAEYFSFVKEDVFTWR--PTELFDL 135 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSG------GGGGEEEECCCTTTCC--CSSCEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccC------CCcceEEEECchhcCC--CCCCeeE
Confidence 456999999999999998865 57899999999999999999885321 2467999999999864 4569999
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
|++...-. .++ .-...++++.+++.|+|||.+++.......
T Consensus 136 v~~~~~l~-~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 176 (235)
T 3lcc_A 136 IFDYVFFC-AIE-PEMRPAWAKSMYELLKPDGELITLMYPITD 176 (235)
T ss_dssp EEEESSTT-TSC-GGGHHHHHHHHHHHEEEEEEEEEEECCCSC
T ss_pred EEEChhhh-cCC-HHHHHHHHHHHHHHCCCCcEEEEEEecccc
Confidence 99743221 222 123468999999999999999987765543
No 120
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.17 E-value=1.7e-10 Score=110.94 Aligned_cols=113 Identities=16% Similarity=0.001 Sum_probs=87.4
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLW-PSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGR 216 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~-p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~ 216 (345)
..+..+||++|||+|+++.++.... |+.+|+++|+||.+++.|+++...... + +++++.+|+.++.. ..+.
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~------~-~i~~~~~D~~~~~~-~~~~ 272 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL------S-WIRFLRADARHLPR-FFPE 272 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC------T-TCEEEECCGGGGGG-TCCC
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC------C-ceEEEeCChhhCcc-ccCC
Confidence 3466799999999999999999876 789999999999999999998753321 2 79999999999643 3456
Q ss_pred ccEEEEcCCCCCCCCCC--c--chHHHHHHHHhccCCCcEEEEEec
Q 038076 217 YAGIVVDLFSEGKVLPQ--L--EEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~--l--~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
||+|++|.+-+...... + .-.++++.+++.|+|||.+++-..
T Consensus 273 ~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 273 VDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp CSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred CCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 89999986543222111 1 115788899999999999988654
No 121
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.17 E-value=1.2e-10 Score=105.39 Aligned_cols=111 Identities=14% Similarity=0.161 Sum_probs=84.6
Q ss_pred ccCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccC---
Q 038076 137 AIVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDA--- 213 (345)
Q Consensus 137 ~~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~--- 213 (345)
...+..+||+||||+|..+..+.+..+ +|++||++|.+++.|++.+. ..+++++.+|+.+.-...
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~----------~~~~~~~~~d~~~~~~~~~~~ 120 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT----------AANISYRLLDGLVPEQAAQIH 120 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC----------CTTEEEEECCTTCHHHHHHHH
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc----------ccCceEEECcccccccccccc
Confidence 345668999999999999999998765 89999999999999999873 347999999998853211
Q ss_pred -CCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 214 -SGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 214 -~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
...||+|++..... .++ .-...++++++++.|+|||.+++..+...
T Consensus 121 ~~~~~d~v~~~~~~~-~~~-~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 121 SEIGDANIYMRTGFH-HIP-VEKRELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp HHHCSCEEEEESSST-TSC-GGGHHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred cccCccEEEEcchhh-cCC-HHHHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 13499999864332 122 11346899999999999998776655433
No 122
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.17 E-value=9e-11 Score=102.08 Aligned_cols=106 Identities=13% Similarity=0.173 Sum_probs=82.1
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|..+..+.+. +.+++++|+++.+++.|++.+.... .++++++.+|+.+... +++||
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~~~~d~~~~~~--~~~~D 99 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIEN-------LDNLHTRVVDLNNLTF--DRQYD 99 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHT-------CTTEEEEECCGGGCCC--CCCEE
T ss_pred cCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCC-------CCCcEEEEcchhhCCC--CCCce
Confidence 35679999999999999999875 5799999999999999998774221 2469999999988532 68899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEe
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
+|++...-. ..+ .-...++++.+++.|+|||.+++..
T Consensus 100 ~v~~~~~l~-~~~-~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 100 FILSTVVLM-FLE-AKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp EEEEESCGG-GSC-GGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEcchhh-hCC-HHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 999853221 111 1134679999999999999976543
No 123
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.17 E-value=7.2e-11 Score=107.12 Aligned_cols=108 Identities=12% Similarity=0.135 Sum_probs=83.1
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|..+..+.+. +.+++++|+++.+++.|++..... +.+++++.+|+.+.. .+++||
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~--------~~~v~~~~~d~~~~~--~~~~fD 107 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKER--------NLKIEFLQGDVLEIA--FKNEFD 107 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT--------TCCCEEEESCGGGCC--CCSCEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhc--------CCceEEEECChhhcc--cCCCcc
Confidence 35679999999999999999875 579999999999999999887422 346999999998853 346899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+|++........+ .-...++++.+++.|+|||.+++.+..
T Consensus 108 ~v~~~~~~~~~~~-~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 108 AVTMFFSTIMYFD-EEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp EEEECSSGGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEcCCchhcCC-HHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 9997421111111 112357899999999999999987654
No 124
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.17 E-value=8.3e-11 Score=106.09 Aligned_cols=106 Identities=15% Similarity=0.099 Sum_probs=81.6
Q ss_pred CCCCCEEEEeecccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccc--ccCCC
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLW-PSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPS--EDASG 215 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~-p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l--~~~~~ 215 (345)
.+..+||++|||+|.++..+++.. |..+|++||++|.+++.+.+.... .++++++.+|+.+.. ....+
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~---------~~~v~~~~~d~~~~~~~~~~~~ 146 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK---------RTNIIPVIEDARHPHKYRMLIA 146 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH---------CTTEEEECSCTTCGGGGGGGCC
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc---------cCCeEEEEcccCChhhhcccCC
Confidence 456789999999999999999875 668999999998877665554421 247999999998842 33467
Q ss_pred cccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 216 RYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+||+|++|.... -....++.++.+.|+|||.+++.+..
T Consensus 147 ~~D~V~~~~~~~------~~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 147 MVDVIFADVAQP------DQTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp CEEEEEECCCCT------THHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred cEEEEEEcCCCc------cHHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 899999976411 12345688899999999999986654
No 125
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.16 E-value=6.9e-11 Score=109.45 Aligned_cols=114 Identities=13% Similarity=0.066 Sum_probs=86.2
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|..+..+.+. +..+++++|+++.+++.|++.+.... ...+++++.+|+.+.....+++||
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~------~~~~v~~~~~d~~~~~~~~~~~fD 135 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMK------RRFKVFFRAQDSYGRHMDLGKEFD 135 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSC------CSSEEEEEESCTTTSCCCCSSCEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcC------CCccEEEEECCccccccCCCCCcC
Confidence 56789999999999988887765 55699999999999999999875322 135799999999875322467899
Q ss_pred EEEEcCCCCCCCCCC-cchHHHHHHHHhccCCCcEEEEEecCC
Q 038076 219 GIVVDLFSEGKVLPQ-LEEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~-l~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
+|++...-. ....+ -...++++.+++.|+|||.+++.....
T Consensus 136 ~v~~~~~l~-~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 136 VISSQFSFH-YAFSTSESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp EEEEESCGG-GGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred EEEECchhh-hhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 999863211 10011 123678999999999999999887643
No 126
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.16 E-value=1.2e-10 Score=113.72 Aligned_cols=111 Identities=16% Similarity=0.039 Sum_probs=86.8
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
++.+||++|||+|.++..+.+. +.+|++||+|+.+++.|++++... +.+++++.+|+.+... ..++||+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~--------~~~v~~~~~D~~~~~~-~~~~fD~ 301 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEAN--------ALKAQALHSDVDEALT-EEARFDI 301 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHT--------TCCCEEEECSTTTTSC-TTCCEEE
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHc--------CCCeEEEEcchhhccc-cCCCeEE
Confidence 5679999999999999999876 579999999999999999987533 2348999999998754 3579999
Q ss_pred EEEcCCCCCCC-CCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 220 IVVDLFSEGKV-LPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 220 Ii~D~f~~~~~-p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
|+++..-.... ...-...++++.+++.|+|||.+++.+....
T Consensus 302 Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l 344 (381)
T 3dmg_A 302 IVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFL 344 (381)
T ss_dssp EEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTS
T ss_pred EEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCC
Confidence 99975332211 1112345799999999999999998766443
No 127
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.16 E-value=1e-10 Score=103.68 Aligned_cols=105 Identities=18% Similarity=0.140 Sum_probs=81.9
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLW-PSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGR 216 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~-p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~ 216 (345)
..++.+||+||||+|..+..+.+.. |..+++++|+++.+++.|++.+.... -++++++.+|+...+. ..++
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-------~~~v~~~~~d~~~~~~-~~~~ 146 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG-------YDNVIVIVGDGTLGYE-PLAP 146 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT-------CTTEEEEESCGGGCCG-GGCC
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-------CCCeEEEECCcccCCC-CCCC
Confidence 3466799999999999999998875 55899999999999999998874221 2459999999966543 2568
Q ss_pred ccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCC
Q 038076 217 YAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
||+|+++.... .++ +.+.+.|+|||.+++.+...
T Consensus 147 fD~v~~~~~~~-~~~---------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 147 YDRIYTTAAGP-KIP---------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp EEEEEESSBBS-SCC---------HHHHHTEEEEEEEEEEESSS
T ss_pred eeEEEECCchH-HHH---------HHHHHHcCCCcEEEEEECCC
Confidence 99999864332 111 47889999999999988654
No 128
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.16 E-value=7.7e-11 Score=113.53 Aligned_cols=118 Identities=14% Similarity=0.125 Sum_probs=87.3
Q ss_pred HHHHHhhccccCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccc
Q 038076 128 YWDEFVSLPAIVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVF 207 (345)
Q Consensus 128 Y~~~~~~l~~~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~ 207 (345)
|.+.+.......++++||+||||+|.++..+.+. +..+|++||+++ +++.|++....... .++++++.+|+.
T Consensus 54 ~~~~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~~~~~~~~~------~~~v~~~~~d~~ 125 (349)
T 3q7e_A 54 YRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAVKIVKANKL------DHVVTIIKGKVE 125 (349)
T ss_dssp HHHHHHTCHHHHTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTC------TTTEEEEESCTT
T ss_pred HHHHHHhccccCCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHHHHHHHcCC------CCcEEEEECcHH
Confidence 4444433333346789999999999999999876 667999999996 99999987753321 457999999999
Q ss_pred cccccCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 208 SPSEDASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 208 ~~l~~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
+. ....++||+|+++.... .....-...++++.+.+.|+|||+++.
T Consensus 126 ~~-~~~~~~fD~Iis~~~~~-~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 126 EV-ELPVEKVDIIISEWMGY-CLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp TC-CCSSSCEEEEEECCCBB-TBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred Hc-cCCCCceEEEEEccccc-cccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 86 33458999999864321 111222346788999999999999874
No 129
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.16 E-value=7.6e-11 Score=103.67 Aligned_cols=113 Identities=12% Similarity=0.090 Sum_probs=85.7
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
+.++.+||+||||+|.++..+.+..+ .+++++|+++.+++.|++.+.. .++++++.+|+.+. ...+++|
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~-~~v~~~D~s~~~~~~a~~~~~~---------~~~i~~~~~d~~~~-~~~~~~f 108 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGF-PNVTSVDYSSVVVAAMQACYAH---------VPQLRWETMDVRKL-DFPSASF 108 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTC-CCEEEEESCHHHHHHHHHHTTT---------CTTCEEEECCTTSC-CSCSSCE
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCC-CcEEEEeCCHHHHHHHHHhccc---------CCCcEEEEcchhcC-CCCCCcc
Confidence 35678999999999999999987643 3899999999999999998752 35799999999885 3346789
Q ss_pred cEEEEcCCC-----CCCCCCC------cchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 218 AGIVVDLFS-----EGKVLPQ------LEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 218 D~Ii~D~f~-----~~~~p~~------l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
|+|++...- ....+.. -...++++++.+.|+|||.+++......
T Consensus 109 D~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 109 DVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp EEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCH
T ss_pred cEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCc
Confidence 999974211 0000100 1236789999999999999998877543
No 130
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.16 E-value=2e-10 Score=99.06 Aligned_cols=107 Identities=19% Similarity=0.191 Sum_probs=83.1
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|..+..+.+. +.+++++|+++.+++.+++.+. +++++.+|+.+. ...+++||
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~------------~~~~~~~d~~~~-~~~~~~~D 109 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFP------------EARWVVGDLSVD-QISETDFD 109 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCT------------TSEEEECCTTTS-CCCCCCEE
T ss_pred cCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCC------------CCcEEEcccccC-CCCCCcee
Confidence 46789999999999999999875 5799999999999999999762 478999999875 23457899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
+|++....-...+ .-...++++.+.+.|+|||.+++......
T Consensus 110 ~i~~~~~~~~~~~-~~~~~~~l~~~~~~l~~~G~l~~~~~~~~ 151 (195)
T 3cgg_A 110 LIVSAGNVMGFLA-EDGREPALANIHRALGADGRAVIGFGAGR 151 (195)
T ss_dssp EEEECCCCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEETTS
T ss_pred EEEECCcHHhhcC-hHHHHHHHHHHHHHhCCCCEEEEEeCCCC
Confidence 9998521111111 01236789999999999999999876554
No 131
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.16 E-value=3.7e-11 Score=112.40 Aligned_cols=113 Identities=16% Similarity=0.297 Sum_probs=85.5
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
++.+||+||||+|..+..+.+. +.+|++||+++.+++.|++.+..... ....+++++.+|+.++- .+++||+
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~~~v~~~~~d~~~~~--~~~~fD~ 153 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPA----DVRDRCTLVQGDMSAFA--LDKRFGT 153 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCH----HHHTTEEEEECBTTBCC--CSCCEEE
T ss_pred CCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhccc----ccccceEEEeCchhcCC--cCCCcCE
Confidence 4569999999999999999875 57899999999999999998753210 00157999999999863 2689999
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
|++........ ..-...++++++++.|+|||.+++.+....
T Consensus 154 v~~~~~~~~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 154 VVISSGSINEL-DEADRRGLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp EEECHHHHTTS-CHHHHHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred EEECCcccccC-CHHHHHHHHHHHHHHcCCCcEEEEEeecCc
Confidence 98631111111 111236899999999999999999887765
No 132
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.15 E-value=2.7e-10 Score=102.28 Aligned_cols=105 Identities=14% Similarity=0.099 Sum_probs=83.2
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|..+..+.+. +..+++++|+++.+++.|++.+. ..+++++.+|+.+.. ..+++||
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~----------~~~~~~~~~d~~~~~-~~~~~fD 109 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGP----------DTGITYERADLDKLH-LPQDSFD 109 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSC----------SSSEEEEECCGGGCC-CCTTCEE
T ss_pred cCCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcc----------cCCceEEEcChhhcc-CCCCCce
Confidence 35689999999999999998876 33499999999999999999864 247999999998853 3467899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+|++...-. ..+ ...++++.+++.|+|||.+++....
T Consensus 110 ~v~~~~~l~-~~~---~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 110 LAYSSLALH-YVE---DVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp EEEEESCGG-GCS---CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEecccc-ccc---hHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 999853211 111 2468999999999999999987643
No 133
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.15 E-value=1.7e-10 Score=104.53 Aligned_cols=107 Identities=13% Similarity=0.082 Sum_probs=83.4
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|.++..+++.. ..+++++|+++.+++.|++.+.. .++++++.+|+.+. ...+++||
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~---------~~~~~~~~~d~~~~-~~~~~~fD 160 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAG---------MPVGKFILASMETA-TLPPNTYD 160 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTT---------SSEEEEEESCGGGC-CCCSSCEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhcc---------CCceEEEEccHHHC-CCCCCCeE
Confidence 357899999999999999988764 56899999999999999998742 25799999999874 33467899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
+|++...-. .++. -...++++.+++.|+|||.+++...
T Consensus 161 ~v~~~~~l~-~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 161 LIVIQWTAI-YLTD-ADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp EEEEESCGG-GSCH-HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEcchhh-hCCH-HHHHHHHHHHHHhcCCCeEEEEEec
Confidence 999843111 1111 1236789999999999999988654
No 134
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.14 E-value=3.7e-11 Score=111.35 Aligned_cols=115 Identities=16% Similarity=0.132 Sum_probs=84.1
Q ss_pred CCCCEEEEeecccHHHHHHHHh-------CCC-----CEEEEEECCH--------------HHHHHHHHhcCC-CCCCC-
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDL-------WPS-----LKLEGWEIDE--------------ILIDKVRDYFGL-SDLEK- 191 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~-------~p~-----~~v~~VEidp--------------~vi~~A~~~f~~-~~~~~- 191 (345)
++.+||+||+|+|.....+.+. .|. .+++++|.+| ++.+.|++.+.. +....
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4578999999999888776543 563 6899999998 344456665421 10000
Q ss_pred ---CCCC--CCcEEEEEcccccccccCCC----cccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 192 ---PTAT--GGVLQVHIGDVFSPSEDASG----RYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 192 ---~~~~--~~rv~v~~gDa~~~l~~~~~----~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
.... ..+++++.||+++.+...+. .||+|++|.|.+... +.+++.++|+.+++.|+|||+++.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~-p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKN-PDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTC-GGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccC-hhhcCHHHHHHHHHHcCCCcEEEE
Confidence 0011 24688999999998876543 799999999886543 478899999999999999999984
No 135
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.14 E-value=2e-10 Score=97.10 Aligned_cols=125 Identities=14% Similarity=0.158 Sum_probs=90.6
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccc-----c
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLW-PSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPS-----E 211 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~-p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l-----~ 211 (345)
..+..+||++|||+|..+..+.+.+ ++.+++++|+++ +++. ++++++.+|+.+.- .
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------------~~~~~~~~d~~~~~~~~~~~ 81 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------------VGVDFLQGDFRDELVMKALL 81 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------------TTEEEEESCTTSHHHHHHHH
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------------CcEEEEEcccccchhhhhhh
Confidence 3566799999999999999999874 668999999999 6421 36899999998752 1
Q ss_pred --cCCCcccEEEEcCCCCCCCCCCcc-------hHHHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHH
Q 038076 212 --DASGRYAGIVVDLFSEGKVLPQLE-------EVATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMH 282 (345)
Q Consensus 212 --~~~~~yD~Ii~D~f~~~~~p~~l~-------t~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~ 282 (345)
..+++||+|+++............ ..++++.+.+.|+|||.+++....... .
T Consensus 82 ~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~-------------------~ 142 (180)
T 1ej0_A 82 ERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEG-------------------F 142 (180)
T ss_dssp HHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTT-------------------H
T ss_pred ccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCc-------------------H
Confidence 245789999997543211000000 158899999999999999988775543 3
Q ss_pred HHHHHHHHHHCCCCEEEE
Q 038076 283 NSAIRALSEAFPGKVSWK 300 (345)
Q Consensus 283 ~~~~~~l~~~F~~~v~~~ 300 (345)
..+...+++.|. .+.+.
T Consensus 143 ~~~~~~~~~~~~-~~~~~ 159 (180)
T 1ej0_A 143 DEYLREIRSLFT-KVKVR 159 (180)
T ss_dssp HHHHHHHHHHEE-EEEEE
T ss_pred HHHHHHHHHhhh-hEEee
Confidence 456677777787 55543
No 136
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.14 E-value=7.1e-11 Score=106.83 Aligned_cols=107 Identities=16% Similarity=0.137 Sum_probs=82.2
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
++.+||+||||+|..+..+++.. ..+++++|+++.+++.|++.+.... ..+++++.+|+.++. ..+++||+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~~~~d~~~~~-~~~~~fD~ 149 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEG-------KRVRNYFCCGLQDFT-PEPDSYDV 149 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGG-------GGEEEEEECCGGGCC-CCSSCEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcC-------CceEEEEEcChhhcC-CCCCCEEE
Confidence 57899999999999999888754 5799999999999999999875221 346899999987753 34568999
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEe
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
|+++..-. .++.. ...++++.+++.|+|||.+++..
T Consensus 150 v~~~~~l~-~~~~~-~~~~~l~~~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 150 IWIQWVIG-HLTDQ-HLAEFLRRCKGSLRPNGIIVIKD 185 (241)
T ss_dssp EEEESCGG-GSCHH-HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEcchhh-hCCHH-HHHHHHHHHHHhcCCCeEEEEEE
Confidence 99863211 11111 12478999999999999998854
No 137
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.14 E-value=1.4e-10 Score=107.50 Aligned_cols=105 Identities=12% Similarity=0.102 Sum_probs=83.1
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
++.+||++|||+|..+..+.+. +.+|++||+++.+++.|++.+... +.+++++.+|+.+... .++||+
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~--------~~~~~~~~~d~~~~~~--~~~fD~ 187 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKE--------NLNISTALYDINAANI--QENYDF 187 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT--------TCCEEEEECCGGGCCC--CSCEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHc--------CCceEEEEeccccccc--cCCccE
Confidence 6789999999999999999876 569999999999999999987532 2279999999988643 789999
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
|++...-. ..+ .-...++++.+++.|+|||.+++...
T Consensus 188 i~~~~~~~-~~~-~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 188 IVSTVVFM-FLN-RERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp EEECSSGG-GSC-GGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEccchh-hCC-HHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 99854221 111 12345799999999999999766544
No 138
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.14 E-value=1.2e-10 Score=110.47 Aligned_cols=105 Identities=15% Similarity=0.045 Sum_probs=83.0
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWP-SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGR 216 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p-~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~ 216 (345)
..++.+||+||||+|.++..+.+..+ ..+|+++|+++++++.|++.+.... -++++++.+|+.+.+. ..++
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g-------~~~v~~~~~d~~~~~~-~~~~ 144 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG-------IENVIFVCGDGYYGVP-EFSP 144 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT-------CCSEEEEESCGGGCCG-GGCC
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcC-------CCCeEEEECChhhccc-cCCC
Confidence 34678999999999999999998766 4789999999999999999874322 2359999999998654 3468
Q ss_pred ccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCC
Q 038076 217 YAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
||+|+++.... .++ +.+.+.|+|||++++.+...
T Consensus 145 fD~Iv~~~~~~-~~~---------~~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 145 YDVIFVTVGVD-EVP---------ETWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp EEEEEECSBBS-CCC---------HHHHHHEEEEEEEEEEBCBG
T ss_pred eEEEEEcCCHH-HHH---------HHHHHhcCCCcEEEEEECCC
Confidence 99999975332 111 56788999999999987654
No 139
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.14 E-value=1.3e-10 Score=101.80 Aligned_cols=105 Identities=15% Similarity=0.212 Sum_probs=83.1
Q ss_pred CEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccEEEE
Q 038076 143 PIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAGIVV 222 (345)
Q Consensus 143 ~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~Ii~ 222 (345)
+||+||||+|..+..+.+. +.+++++|+++.+++.|++.+... +.+++++.+|+.+. ...+++||+|++
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~--------~~~~~~~~~d~~~~-~~~~~~fD~v~~ 100 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEK--------GVKITTVQSNLADF-DIVADAWEGIVS 100 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHH--------TCCEEEECCBTTTB-SCCTTTCSEEEE
T ss_pred CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhc--------CCceEEEEcChhhc-CCCcCCccEEEE
Confidence 9999999999999998875 579999999999999999987421 23799999999875 234578999998
Q ss_pred cCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 223 DLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 223 D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
.. . .. ..-...++++.+++.|+|||.+++.......
T Consensus 101 ~~-~--~~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 136 (202)
T 2kw5_A 101 IF-C--HL-PSSLRQQLYPKVYQGLKPGGVFILEGFAPEQ 136 (202)
T ss_dssp EC-C--CC-CHHHHHHHHHHHHTTCCSSEEEEEEEECTTT
T ss_pred Eh-h--cC-CHHHHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence 42 2 11 1113467899999999999999998876544
No 140
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.14 E-value=1.9e-10 Score=110.53 Aligned_cols=117 Identities=15% Similarity=0.135 Sum_probs=85.7
Q ss_pred HHHHHhhccccCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccc
Q 038076 128 YWDEFVSLPAIVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVF 207 (345)
Q Consensus 128 Y~~~~~~l~~~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~ 207 (345)
|.+.+.......++++||+||||+|.++..+.+. +..+|++||+++ +++.|++.+.... ..++++++.+|+.
T Consensus 52 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~~------~~~~i~~~~~d~~ 123 (340)
T 2fyt_A 52 YRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLNK------LEDTITLIKGKIE 123 (340)
T ss_dssp HHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHTT------CTTTEEEEESCTT
T ss_pred HHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHcC------CCCcEEEEEeeHH
Confidence 4344443333456789999999999999998875 557999999997 8999998774322 1368999999998
Q ss_pred cccccCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEE
Q 038076 208 SPSEDASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFM 254 (345)
Q Consensus 208 ~~l~~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlv 254 (345)
++ ....++||+|+++.... .....-.-.+++..+++.|+|||+++
T Consensus 124 ~~-~~~~~~~D~Ivs~~~~~-~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 124 EV-HLPVEKVDVIISEWMGY-FLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TS-CCSCSCEEEEEECCCBT-TBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred Hh-cCCCCcEEEEEEcCchh-hccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 85 33457899999864211 11111233568999999999999987
No 141
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.14 E-value=1.9e-10 Score=101.83 Aligned_cols=104 Identities=15% Similarity=0.151 Sum_probs=82.0
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccc---ccCCC
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPS---EDASG 215 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l---~~~~~ 215 (345)
.++.+||+||||+|..+..+.+. +.+++++|+++.+++.|++.. +++++.+|..+.. ...+.
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-------------~~~~~~~~~~~~~~~~~~~~~ 115 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAAG-------------AGEVHLASYAQLAEAKVPVGK 115 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHTC-------------SSCEEECCHHHHHTTCSCCCC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHhc-------------ccccchhhHHhhcccccccCC
Confidence 35689999999999999999876 679999999999999999871 3567888888762 22456
Q ss_pred cccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 216 RYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
+||+|++...-. .-...++++.+++.|+|||.+++.......
T Consensus 116 ~fD~v~~~~~l~-----~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 157 (227)
T 3e8s_A 116 DYDLICANFALL-----HQDIIELLSAMRTLLVPGGALVIQTLHPWS 157 (227)
T ss_dssp CEEEEEEESCCC-----SSCCHHHHHHHHHTEEEEEEEEEEECCTTT
T ss_pred CccEEEECchhh-----hhhHHHHHHHHHHHhCCCeEEEEEecCccc
Confidence 699999854332 112358999999999999999998776543
No 142
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.13 E-value=1.4e-10 Score=104.82 Aligned_cols=104 Identities=13% Similarity=0.104 Sum_probs=83.8
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+||++|||+|.++..+++. ..+++++|+++.+++.|++++.... .+++++++.+|..+... .+++||
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~------~~~~~~~~~~d~~~~~~-~~~~~D 160 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFN------LGKNVKFFNVDFKDAEV-PEGIFH 160 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTT------CCTTEEEECSCTTTSCC-CTTCBS
T ss_pred CCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcC------CCCcEEEEEcChhhccc-CCCccc
Confidence 35679999999999999999987 6899999999999999999874221 13679999999988641 246899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
+|++|..+ ..++++.+.+.|+|||.+++.....
T Consensus 161 ~v~~~~~~---------~~~~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 161 AAFVDVRE---------PWHYLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp EEEECSSC---------GGGGHHHHHHHBCTTCEEEEEESSH
T ss_pred EEEECCcC---------HHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 99986432 1357899999999999999877643
No 143
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.13 E-value=1.1e-10 Score=113.49 Aligned_cols=107 Identities=13% Similarity=-0.008 Sum_probs=84.5
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc-CCCccc
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED-ASGRYA 218 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~-~~~~yD 218 (345)
++++||+|| |+|.++..+.+..+..+|++||+||.+++.|+++..... -.+++++.+|+.+.+.. ..++||
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g-------~~~v~~~~~D~~~~l~~~~~~~fD 243 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIG-------YEDIEIFTFDLRKPLPDYALHKFD 243 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHT-------CCCEEEECCCTTSCCCTTTSSCBS
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-------CCCEEEEEChhhhhchhhccCCcc
Confidence 467999999 999999999887777899999999999999999874221 12799999999996543 356899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCc-EEEEEecC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNG-RFMVNCGG 259 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgG-vlvvn~~~ 259 (345)
+|++|..-.. . ...++++.+.+.|+||| ++++.+..
T Consensus 244 ~Vi~~~p~~~---~--~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 244 TFITDPPETL---E--AIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp EEEECCCSSH---H--HHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred EEEECCCCch---H--HHHHHHHHHHHHcccCCeEEEEEEec
Confidence 9999853211 1 13789999999999999 44666654
No 144
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.13 E-value=3e-10 Score=106.44 Aligned_cols=109 Identities=9% Similarity=0.089 Sum_probs=84.3
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc--
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY-- 217 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y-- 217 (345)
++.+||+||||+|.++..+.+. |+.+|++||+++.+++.|+++...... ..+++++.+|+.+.+. ++|
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l------~~~v~~~~~D~~~~~~---~~f~~ 192 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGV------SDRFFVRKGEFLEPFK---EKFAS 192 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTC------TTSEEEEESSTTGGGG---GGTTT
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCC------CCceEEEECcchhhcc---cccCC
Confidence 4578999999999999999988 899999999999999999998743221 3479999999998754 478
Q ss_pred -cEEEEcCCCCCC---CCC---Cc---------chHHHHHHHH-hccCCCcEEEEEec
Q 038076 218 -AGIVVDLFSEGK---VLP---QL---------EEVATWLKLK-DRLMPNGRFMVNCG 258 (345)
Q Consensus 218 -D~Ii~D~f~~~~---~p~---~l---------~t~ef~~~~~-~~L~pgGvlvvn~~ 258 (345)
|+|+++.+-... ... +- ...++++.+. +.|+|||.+++.+.
T Consensus 193 ~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 193 IEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp CCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred CCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 999997422110 000 00 0127899999 99999999998654
No 145
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.13 E-value=4.9e-11 Score=107.11 Aligned_cols=109 Identities=10% Similarity=0.082 Sum_probs=83.7
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
++.+||+||||+|..+..+.+. +.+++++|+++.+++.|++.+... +.+++++.+|+.++.. +++||+
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~--------~~~~~~~~~d~~~~~~--~~~fD~ 104 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQ--------GLKPRLACQDISNLNI--NRKFDL 104 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHT--------TCCCEEECCCGGGCCC--SCCEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhc--------CCCeEEEecccccCCc--cCCceE
Confidence 5689999999999999998876 578999999999999999987422 2378999999988632 378999
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCC
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
|++....-.+.+..-...++++.+++.|+|||.+++.+...
T Consensus 105 v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (246)
T 1y8c_A 105 ITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSY 145 (246)
T ss_dssp EEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred EEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCH
Confidence 99842010112211234678999999999999999877643
No 146
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.13 E-value=1.7e-10 Score=112.20 Aligned_cols=117 Identities=16% Similarity=0.131 Sum_probs=86.8
Q ss_pred HHHHHhhccccCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccc
Q 038076 128 YWDEFVSLPAIVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVF 207 (345)
Q Consensus 128 Y~~~~~~l~~~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~ 207 (345)
|.+.+.......++++||+||||+|.++..+++. +..+|++||++ .+++.|++.+..... .++++++.+|+.
T Consensus 51 ~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~~~~------~~~v~~~~~d~~ 122 (376)
T 3r0q_C 51 YFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKANNL------DHIVEVIEGSVE 122 (376)
T ss_dssp HHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHHTTC------TTTEEEEESCGG
T ss_pred HHHHHHhccccCCCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHHcCC------CCeEEEEECchh
Confidence 3344433333356789999999999999999876 44599999999 999999988753322 467999999998
Q ss_pred cccccCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 208 SPSEDASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 208 ~~l~~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
++.. +++||+|+++.... .....-.-..+++.+.+.|+|||++++
T Consensus 123 ~~~~--~~~~D~Iv~~~~~~-~l~~e~~~~~~l~~~~~~LkpgG~li~ 167 (376)
T 3r0q_C 123 DISL--PEKVDVIISEWMGY-FLLRESMFDSVISARDRWLKPTGVMYP 167 (376)
T ss_dssp GCCC--SSCEEEEEECCCBT-TBTTTCTHHHHHHHHHHHEEEEEEEES
T ss_pred hcCc--CCcceEEEEcChhh-cccchHHHHHHHHHHHhhCCCCeEEEE
Confidence 8642 38999999965321 111222345689999999999999975
No 147
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.13 E-value=2.7e-10 Score=108.28 Aligned_cols=116 Identities=13% Similarity=0.116 Sum_probs=88.1
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWP-SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p-~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
.+..+||++|||+|..+..+.+..+ ..+|+++|+++.+++.+++++.... -++++++.+|+.++.. ..++|
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g-------~~~v~~~~~D~~~~~~-~~~~f 188 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLG-------VLNVILFHSSSLHIGE-LNVEF 188 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHT-------CCSEEEESSCGGGGGG-GCCCE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhC-------CCeEEEEECChhhccc-ccccC
Confidence 4567999999999999999998764 5899999999999999998874221 2369999999998743 35689
Q ss_pred cEEEEcCCCCC-C-C---CCCc-------------chHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 218 AGIVVDLFSEG-K-V---LPQL-------------EEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 218 D~Ii~D~f~~~-~-~---p~~l-------------~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
|+|++|+...+ + + |... ...++++.+.+.|+|||.+++...+...
T Consensus 189 D~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~ 251 (315)
T 1ixk_A 189 DKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEP 251 (315)
T ss_dssp EEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCG
T ss_pred CEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCh
Confidence 99999976432 1 1 1110 1258899999999999999886655443
No 148
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.13 E-value=1.4e-10 Score=108.03 Aligned_cols=111 Identities=13% Similarity=0.132 Sum_probs=85.8
Q ss_pred ccCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCc
Q 038076 137 AIVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGR 216 (345)
Q Consensus 137 ~~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~ 216 (345)
.+.++.+||+||||+|..+..+.+.+ +.+++++|+++.+++.|++...... ..++++++.+|+.+. ...+++
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~------~~~~~~~~~~d~~~~-~~~~~~ 150 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAG------LADNITVKYGSFLEI-PCEDNS 150 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHT------CTTTEEEEECCTTSC-SSCTTC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcC------CCcceEEEEcCcccC-CCCCCC
Confidence 34567899999999999999998865 4699999999999999998763221 136899999999874 334678
Q ss_pred ccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 217 YAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
||+|++...-. .++. ..++++++++.|+|||.+++....
T Consensus 151 fD~v~~~~~l~-~~~~---~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 151 YDFIWSQDAFL-HSPD---KLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp EEEEEEESCGG-GCSC---HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EeEEEecchhh-hcCC---HHHHHHHHHHHcCCCeEEEEEEec
Confidence 99999742111 1222 478999999999999999887543
No 149
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.13 E-value=2.3e-10 Score=105.63 Aligned_cols=107 Identities=15% Similarity=0.196 Sum_probs=85.2
Q ss_pred CCCCCEEEEeecccHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHhcCCC-CCCCCCCCCCcEEEEEcccccccccCCCc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDL-WPSLKLEGWEIDEILIDKVRDYFGLS-DLEKPTATGGVLQVHIGDVFSPSEDASGR 216 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~-~p~~~v~~VEidp~vi~~A~~~f~~~-~~~~~~~~~~rv~v~~gDa~~~l~~~~~~ 216 (345)
.+..+||++|||+|.++..+++. .|..+++++|+++.+++.|++++... . ...++++++.+|+.+.. ..+++
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g-----~~~~~v~~~~~d~~~~~-~~~~~ 171 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYG-----QPPDNWRLVVSDLADSE-LPDGS 171 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHT-----SCCTTEEEECSCGGGCC-CCTTC
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-----CCCCcEEEEECchHhcC-CCCCc
Confidence 45679999999999999999885 56789999999999999999987311 0 00257999999998862 23578
Q ss_pred ccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCC
Q 038076 217 YAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
||+|++|..+. .++++.+.+.|+|||.+++.+...
T Consensus 172 ~D~v~~~~~~~---------~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 172 VDRAVLDMLAP---------WEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp EEEEEEESSCG---------GGGHHHHHHHEEEEEEEEEEESSH
T ss_pred eeEEEECCcCH---------HHHHHHHHHhCCCCCEEEEEeCCH
Confidence 99999975421 267999999999999999987643
No 150
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.12 E-value=1.1e-10 Score=114.09 Aligned_cols=118 Identities=12% Similarity=-0.037 Sum_probs=88.4
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc---CCC
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED---ASG 215 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~---~~~ 215 (345)
.+.++||++|||+|+++..+++. ...+|++||++|.+++.|++++..... .+.+++++.+|+.+++.. .++
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~-ga~~V~~vD~s~~al~~A~~N~~~n~~-----~~~~v~~~~~D~~~~l~~~~~~~~ 284 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMG-GAMATTSVDLAKRSRALSLAHFEANHL-----DMANHQLVVMDVFDYFKYARRHHL 284 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHT-TBSEEEEEESCTTHHHHHHHHHHHTTC-----CCTTEEEEESCHHHHHHHHHHTTC
T ss_pred cCCCeEEEEeeccCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCC-----CccceEEEECCHHHHHHHHHHhCC
Confidence 45679999999999999998874 335999999999999999998864432 122899999999998754 256
Q ss_pred cccEEEEcCCCCC----CCCCCc-chHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 216 RYAGIVVDLFSEG----KVLPQL-EEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 216 ~yD~Ii~D~f~~~----~~p~~l-~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
+||+|++|.+... .....+ .-.+++..+.+.|+|||++++.+.....
T Consensus 285 ~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~ 336 (385)
T 2b78_A 285 TYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANM 336 (385)
T ss_dssp CEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS
T ss_pred CccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC
Confidence 8999999965521 111111 1134677789999999999988775553
No 151
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.12 E-value=1.7e-10 Score=110.74 Aligned_cols=109 Identities=16% Similarity=0.189 Sum_probs=85.0
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
++.+||+||||+|.++..+.+..|..+|+++|+++.+++.|++++... +.+.+++.+|+.++. +++||+
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~--------~~~~~~~~~d~~~~~---~~~fD~ 264 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAAN--------GVEGEVFASNVFSEV---KGRFDM 264 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHT--------TCCCEEEECSTTTTC---CSCEEE
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh--------CCCCEEEEccccccc---cCCeeE
Confidence 467999999999999999999888889999999999999999987532 234678999998864 578999
Q ss_pred EEEcCCCCCCCC-CCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 220 IVVDLFSEGKVL-PQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 220 Ii~D~f~~~~~p-~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
|+++..-..... ..-...++++.+++.|+|||.+++-...
T Consensus 265 Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 265 IISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp EEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred EEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 999643221110 0012367899999999999999876554
No 152
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.12 E-value=3.8e-10 Score=102.13 Aligned_cols=108 Identities=11% Similarity=0.071 Sum_probs=83.6
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
..+..+||+||||+|.++..+.+.. .+++++|+++.+++.|++.+.... -++++++.+|+.+. ...+++|
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~-------~~~v~~~~~d~~~~-~~~~~~f 88 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQEKG-------VENVRFQQGTAESL-PFPDDSF 88 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHHT-------CCSEEEEECBTTBC-CSCTTCE
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcC-------CCCeEEEecccccC-CCCCCcE
Confidence 3467899999999999999998764 499999999999999998774221 24799999999874 3456889
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
|+|++..... ..+ ...++++++++.|+|||.+++....
T Consensus 89 D~v~~~~~l~-~~~---~~~~~l~~~~~~LkpgG~l~~~~~~ 126 (239)
T 1xxl_A 89 DIITCRYAAH-HFS---DVRKAVREVARVLKQDGRFLLVDHY 126 (239)
T ss_dssp EEEEEESCGG-GCS---CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEECCchh-hcc---CHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 9999863221 111 2367999999999999998875443
No 153
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.12 E-value=4.5e-10 Score=100.61 Aligned_cols=102 Identities=19% Similarity=0.178 Sum_probs=81.0
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
..++.+||+||||+|..+..+.+.. .+++++|+++.+++.|++.+... ++++++.+|+.+.+. ..++|
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~---------~~v~~~~~d~~~~~~-~~~~f 135 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYY---------NNIKLILGDGTLGYE-EEKPY 135 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTC---------SSEEEEESCGGGCCG-GGCCE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhc---------CCeEEEECCcccccc-cCCCc
Confidence 3456799999999999999998874 79999999999999999988521 279999999988433 35789
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
|+|+++.... ++. +.+.+.|+|||.+++.+....
T Consensus 136 D~v~~~~~~~-----~~~-----~~~~~~L~pgG~l~~~~~~~~ 169 (231)
T 1vbf_A 136 DRVVVWATAP-----TLL-----CKPYEQLKEGGIMILPIGVGR 169 (231)
T ss_dssp EEEEESSBBS-----SCC-----HHHHHTEEEEEEEEEEECSSS
T ss_pred cEEEECCcHH-----HHH-----HHHHHHcCCCcEEEEEEcCCC
Confidence 9999864321 221 368889999999999876543
No 154
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.12 E-value=7.3e-11 Score=106.06 Aligned_cols=92 Identities=15% Similarity=0.160 Sum_probs=77.4
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccC-CCcc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDA-SGRY 217 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~-~~~y 217 (345)
.++.+||+||||+|.++..+.+. +.+|+++|+++.+++.|++.. ++++++.+|+.+.+... +++|
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~------------~~~~~~~~d~~~~~~~~~~~~f 112 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARANA------------PHADVYEWNGKGELPAGLGAPF 112 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHC------------TTSEEEECCSCSSCCTTCCCCE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhC------------CCceEEEcchhhccCCcCCCCE
Confidence 45789999999999999999876 579999999999999999972 36899999997666555 6899
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEE
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFM 254 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlv 254 (345)
|+|++.. . ..++++.+++.|+|||.++
T Consensus 113 D~v~~~~----~------~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 113 GLIVSRR----G------PTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp EEEEEES----C------CSGGGGGHHHHEEEEEEEE
T ss_pred EEEEeCC----C------HHHHHHHHHHHcCCCcEEE
Confidence 9999861 1 1256788999999999998
No 155
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.12 E-value=3.2e-11 Score=110.07 Aligned_cols=110 Identities=15% Similarity=0.098 Sum_probs=81.2
Q ss_pred CCCCEEEEeecccHHHHHHHHh--CCCCEEEEEECCHHHHHHHHHhcCCC---CCCCCCCCCCc----------------
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDL--WPSLKLEGWEIDEILIDKVRDYFGLS---DLEKPTATGGV---------------- 198 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~--~p~~~v~~VEidp~vi~~A~~~f~~~---~~~~~~~~~~r---------------- 198 (345)
++.+||++|||+|.++..+.+. .+..+|+++|+|+.+++.|+++.... .. ..+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 124 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGL------TARELERREQSERFGKPSY 124 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHH------HHHHHHHHHHHHHHCCHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccc------cccchhhhhhhhhcccccc
Confidence 4678999999999999999887 67789999999999999999876422 10 012
Q ss_pred ---------EE-------------EEEccccccccc----CCCcccEEEEcCCCCCCC-CC----CcchHHHHHHHHhcc
Q 038076 199 ---------LQ-------------VHIGDVFSPSED----ASGRYAGIVVDLFSEGKV-LP----QLEEVATWLKLKDRL 247 (345)
Q Consensus 199 ---------v~-------------v~~gDa~~~l~~----~~~~yD~Ii~D~f~~~~~-p~----~l~t~ef~~~~~~~L 247 (345)
++ ++.+|..+.... ..++||+|+++..-.... .. .-.-..+++.+.+.|
T Consensus 125 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~L 204 (250)
T 1o9g_A 125 LEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASAL 204 (250)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHS
T ss_pred hhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhc
Confidence 55 999999886531 345899999974221100 00 012347899999999
Q ss_pred CCCcEEEE
Q 038076 248 MPNGRFMV 255 (345)
Q Consensus 248 ~pgGvlvv 255 (345)
+|||++++
T Consensus 205 kpgG~l~~ 212 (250)
T 1o9g_A 205 PAHAVIAV 212 (250)
T ss_dssp CTTCEEEE
T ss_pred CCCcEEEE
Confidence 99999998
No 156
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.12 E-value=4.1e-10 Score=104.95 Aligned_cols=111 Identities=15% Similarity=0.093 Sum_probs=86.1
Q ss_pred CCCCEEEEeecc---cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc--c----
Q 038076 140 PNGPIAIYGLGG---GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP--S---- 210 (345)
Q Consensus 140 ~p~~VLiIG~G~---G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~--l---- 210 (345)
...+||+||||+ |.+...+.+..|+.+|++||+||.|++.|++.+.. .++++++.+|.++. +
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~---------~~~v~~~~~D~~~~~~~~~~~ 147 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK---------DPNTAVFTADVRDPEYILNHP 147 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT---------CTTEEEEECCTTCHHHHHHSH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC---------CCCeEEEEeeCCCchhhhccc
Confidence 347899999999 98887777778999999999999999999998741 36899999999863 1
Q ss_pred ---cc-CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 211 ---ED-ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 211 ---~~-~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
.. ...+||+|++-..-+ .++.. ....+++++++.|+|||.+++.....+
T Consensus 148 ~~~~~~d~~~~d~v~~~~vlh-~~~d~-~~~~~l~~~~~~L~pGG~l~i~~~~~~ 200 (274)
T 2qe6_A 148 DVRRMIDFSRPAAIMLVGMLH-YLSPD-VVDRVVGAYRDALAPGSYLFMTSLVDT 200 (274)
T ss_dssp HHHHHCCTTSCCEEEETTTGG-GSCTT-THHHHHHHHHHHSCTTCEEEEEEEBCS
T ss_pred hhhccCCCCCCEEEEEechhh-hCCcH-HHHHHHHHHHHhCCCCcEEEEEEecCc
Confidence 01 125899999743221 23333 357899999999999999998876553
No 157
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.11 E-value=8e-11 Score=109.30 Aligned_cols=116 Identities=7% Similarity=0.042 Sum_probs=84.3
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccc--cCCCc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSE--DASGR 216 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~--~~~~~ 216 (345)
.++.+||+||||+|..+..+.+. +.+|+++|+++.+++.|++....... ....+++.+..+|+.+... ..+++
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~~ 130 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRRK---EPAFDKWVIEEANWLTLDKDVPAGDG 130 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTT---SHHHHTCEEEECCGGGHHHHSCCTTC
T ss_pred cCCCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHhhhhccc---ccccceeeEeecChhhCccccccCCC
Confidence 45689999999999999999876 45999999999999999876521100 0113578899999887531 24679
Q ss_pred ccEEEEcCCCCCCCCC----CcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 217 YAGIVVDLFSEGKVLP----QLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~----~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
||+|++....-.+++. .-....+++++++.|+|||.+++...+
T Consensus 131 fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 131 FDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred eEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 9999984111112222 112467999999999999999988754
No 158
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.11 E-value=3.1e-10 Score=103.10 Aligned_cols=105 Identities=14% Similarity=0.133 Sum_probs=83.5
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
..++.+||+||||+|..+..+.+. +.+++++|+++.+++.|++.+. . ..++++++.+|+.+. ...+++|
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~-~-------~~~~~~~~~~d~~~~-~~~~~~f 105 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIA-G-------VDRKVQVVQADARAI-PLPDESV 105 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTT-T-------SCTTEEEEESCTTSC-CSCTTCE
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhh-c-------cCCceEEEEcccccC-CCCCCCe
Confidence 356789999999999999998875 5799999999999999999872 1 146899999999775 3346789
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEe
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
|+|++...-. ..+ ...++++++++.|+|||.+++..
T Consensus 106 D~v~~~~~l~-~~~---~~~~~l~~~~~~L~pgG~l~~~~ 141 (263)
T 2yqz_A 106 HGVIVVHLWH-LVP---DWPKVLAEAIRVLKPGGALLEGW 141 (263)
T ss_dssp EEEEEESCGG-GCT---THHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCchh-hcC---CHHHHHHHHHHHCCCCcEEEEEe
Confidence 9999843211 111 24679999999999999998873
No 159
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.11 E-value=3.4e-10 Score=99.12 Aligned_cols=124 Identities=14% Similarity=0.004 Sum_probs=87.7
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCC--CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccc----
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWP--SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSE---- 211 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p--~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~---- 211 (345)
+.+..+||+||||+|.++..+.+..| +.+|++||++|.. . .++++++.+|+.+...
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~-------~~~v~~~~~d~~~~~~~~~~ 81 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------P-------IPNVYFIQGEIGKDNMNNIK 81 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------C-------CTTCEEEECCTTTTSSCCC-
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------C-------CCCceEEEccccchhhhhhc
Confidence 34567899999999999999998877 6899999999931 1 2468899999987530
Q ss_pred --------------------cCCCcccEEEEcCCCCCC-C--CCCcc----hHHHHHHHHhccCCCcEEEEEecCCCCCC
Q 038076 212 --------------------DASGRYAGIVVDLFSEGK-V--LPQLE----EVATWLKLKDRLMPNGRFMVNCGGIDGVS 264 (345)
Q Consensus 212 --------------------~~~~~yD~Ii~D~f~~~~-~--p~~l~----t~ef~~~~~~~L~pgGvlvvn~~~~~~~~ 264 (345)
-.+.+||+|++|...... . ..+.. ..++++.+.+.|+|||.+++.++....
T Consensus 82 ~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~-- 159 (201)
T 2plw_A 82 NINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQ-- 159 (201)
T ss_dssp ----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTT--
T ss_pred cccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCC--
Confidence 134689999998532211 0 00100 124788899999999999987765432
Q ss_pred ccccCCCCCCCccchHHHHHHHHHHHHHCCCCEEE
Q 038076 265 DMTYGAARPKSMNDVWMHNSAIRALSEAFPGKVSW 299 (345)
Q Consensus 265 ~~~~g~~~~~~~d~~~~~~~~~~~l~~~F~~~v~~ 299 (345)
...+...+++.|. .+.+
T Consensus 160 -----------------~~~l~~~l~~~f~-~v~~ 176 (201)
T 2plw_A 160 -----------------TNNLKTYLKGMFQ-LVHT 176 (201)
T ss_dssp -----------------HHHHHHHHHTTEE-EEEE
T ss_pred -----------------HHHHHHHHHHHHh-eEEE
Confidence 3456677777777 5554
No 160
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.11 E-value=4.8e-10 Score=108.26 Aligned_cols=110 Identities=6% Similarity=0.032 Sum_probs=84.4
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
.+++||+||||+|..+..+.+.+|+.+++++|+ |.+++.|++++...+ ..+|++++.+|..+.-...++.||+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~------~~~~v~~~~~d~~~~~~~~p~~~D~ 251 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLS------GSERIHGHGANLLDRDVPFPTGFDA 251 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCT------TGGGEEEEECCCCSSSCCCCCCCSE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcC------cccceEEEEccccccCCCCCCCcCE
Confidence 568999999999999999999999999999999 999999999875332 1368999999998741012378999
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
|++-..-. ..+. -....+++++++.|+|||.+++.-.
T Consensus 252 v~~~~vlh-~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 252 VWMSQFLD-CFSE-EEVISILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp EEEESCST-TSCH-HHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred EEEechhh-hCCH-HHHHHHHHHHHHhcCCCcEEEEEee
Confidence 99743221 1111 1234789999999999999877543
No 161
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.10 E-value=3e-10 Score=110.58 Aligned_cols=117 Identities=11% Similarity=0.096 Sum_probs=86.2
Q ss_pred CCCCCEEEEeecccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhcCCCCCCC-CCCCCCcEEEEEccccccc-----c
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLW-PSLKLEGWEIDEILIDKVRDYFGLSDLEK-PTATGGVLQVHIGDVFSPS-----E 211 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~-p~~~v~~VEidp~vi~~A~~~f~~~~~~~-~~~~~~rv~v~~gDa~~~l-----~ 211 (345)
.++.+||+||||+|..+..+.+.. |+.+|+++|+++.+++.|++++....... +....++++++.+|+.+.. .
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 356899999999999999998875 67899999999999999998752100000 0001368999999998752 2
Q ss_pred cCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 212 DASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 212 ~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
..+++||+|++...-. ..+ ...++++++++.|+|||.+++....
T Consensus 162 ~~~~~fD~V~~~~~l~-~~~---d~~~~l~~~~r~LkpgG~l~i~~~~ 205 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCN-LST---NKLALFKEIHRVLRDGGELYFSDVY 205 (383)
T ss_dssp CCTTCEEEEEEESCGG-GCS---CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCCCEEEEEEccchh-cCC---CHHHHHHHHHHHcCCCCEEEEEEec
Confidence 2467999999864221 112 2468999999999999999886443
No 162
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.10 E-value=1.2e-08 Score=93.01 Aligned_cols=106 Identities=14% Similarity=0.050 Sum_probs=75.5
Q ss_pred CCCCCEEEEeecccHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccc--cCCC
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDL-WPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSE--DASG 215 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~-~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~--~~~~ 215 (345)
.+..+||++|||+|..+..+.+. .|..+|++||++|.+++...+... ..+++.++.+|++.... ...+
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~---------~r~nv~~i~~Da~~~~~~~~~~~ 145 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQ---------RRPNIFPLLADARFPQSYKSVVE 145 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHH---------HCTTEEEEECCTTCGGGTTTTCC
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhh---------hcCCeEEEEcccccchhhhcccc
Confidence 46689999999999999998876 457899999999988643222111 02469999999986421 2356
Q ss_pred cccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 216 RYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+||+|++|+.. | .....+...+++.|+|||.+++.+-.
T Consensus 146 ~~D~I~~d~a~----~--~~~~il~~~~~~~LkpGG~lvisik~ 183 (232)
T 3id6_C 146 NVDVLYVDIAQ----P--DQTDIAIYNAKFFLKVNGDMLLVIKA 183 (232)
T ss_dssp CEEEEEECCCC----T--THHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred ceEEEEecCCC----h--hHHHHHHHHHHHhCCCCeEEEEEEcc
Confidence 89999998643 1 12233455667799999999987643
No 163
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.09 E-value=2.6e-10 Score=114.05 Aligned_cols=116 Identities=12% Similarity=0.053 Sum_probs=90.2
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPS-LKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~-~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
.+..+||++|||+|..+..+++..++ .+|+++|+++.+++.++++..-.. -. ++++.+|+.++....+++|
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G-------~~-v~~~~~Da~~l~~~~~~~F 171 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWG-------AP-LAVTQAPPRALAEAFGTYF 171 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHC-------CC-CEEECSCHHHHHHHHCSCE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-------Ce-EEEEECCHHHhhhhccccC
Confidence 45679999999999999999987654 799999999999999998874221 23 8999999998754346789
Q ss_pred cEEEEcCCCCCC-C----CCCcc-------------hHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 218 AGIVVDLFSEGK-V----LPQLE-------------EVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 218 D~Ii~D~f~~~~-~----p~~l~-------------t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
|+|++|+...+. . |.... ..++++.+.+.|+|||.+++...+...
T Consensus 172 D~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~ 234 (464)
T 3m6w_A 172 HRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAP 234 (464)
T ss_dssp EEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG
T ss_pred CEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCch
Confidence 999999876431 1 22111 277899999999999999987665544
No 164
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.09 E-value=2.7e-10 Score=109.59 Aligned_cols=118 Identities=14% Similarity=0.150 Sum_probs=85.2
Q ss_pred HHHHHhhccccCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccc
Q 038076 128 YWDEFVSLPAIVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVF 207 (345)
Q Consensus 128 Y~~~~~~l~~~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~ 207 (345)
|.+.+.......++.+||+||||+|.++..+++. +..+|++||+++ +++.|++....... .++++++.+|+.
T Consensus 38 y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~l------~~~v~~~~~d~~ 109 (348)
T 2y1w_A 38 YQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNL------TDRIVVIPGKVE 109 (348)
T ss_dssp HHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTC------TTTEEEEESCTT
T ss_pred HHHHHHhccccCCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHcCC------CCcEEEEEcchh
Confidence 4444433333346789999999999999998875 567999999997 77889887643221 368999999998
Q ss_pred cccccCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEe
Q 038076 208 SPSEDASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 208 ~~l~~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
++- .+++||+|+++.... .... -...+.+..+++.|+|||+++++.
T Consensus 110 ~~~--~~~~~D~Ivs~~~~~-~~~~-~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 110 EVS--LPEQVDIIISEPMGY-MLFN-ERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp TCC--CSSCEEEEEECCCBT-TBTT-TSHHHHHHHGGGGEEEEEEEESCE
T ss_pred hCC--CCCceeEEEEeCchh-cCCh-HHHHHHHHHHHhhcCCCeEEEEec
Confidence 862 346899999864321 1111 123567888999999999998543
No 165
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.09 E-value=1.4e-10 Score=106.63 Aligned_cols=101 Identities=20% Similarity=0.246 Sum_probs=81.1
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||++|||+|.++..+.+..+ +|+++|+||.+++.|++++.... -. ++++.+|+.+.+ ..++||
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~-------~~-v~~~~~d~~~~~--~~~~fD 186 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNG-------VR-PRFLEGSLEAAL--PFGPFD 186 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTT-------CC-CEEEESCHHHHG--GGCCEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcC-------Cc-EEEEECChhhcC--cCCCCC
Confidence 4578999999999999999887533 99999999999999999875332 12 899999998864 246899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
+|+++.... .-.+++..+++.|+|||.+++...
T Consensus 187 ~Vv~n~~~~-------~~~~~l~~~~~~LkpgG~lils~~ 219 (254)
T 2nxc_A 187 LLVANLYAE-------LHAALAPRYREALVPGGRALLTGI 219 (254)
T ss_dssp EEEEECCHH-------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEECCcHH-------HHHHHHHHHHHHcCCCCEEEEEee
Confidence 999864221 235789999999999999998654
No 166
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.09 E-value=3.6e-10 Score=102.11 Aligned_cols=105 Identities=18% Similarity=0.190 Sum_probs=80.6
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
..+..+||+||||+|.++..+.+..+ .+|+++|+++.+++.|++.+.... -++++++.+|+..-+. ...+|
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~-------~~~v~~~~~d~~~~~~-~~~~f 159 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAG-------VKNVHVILGDGSKGFP-PKAPY 159 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTT-------CCSEEEEESCGGGCCG-GGCCE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcC-------CCCcEEEECCcccCCC-CCCCc
Confidence 34667999999999999999998876 899999999999999999874222 2359999999844332 23469
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
|+|+++.... ++ .+.+.+.|+|||.+++.+....
T Consensus 160 D~Ii~~~~~~-----~~-----~~~~~~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 160 DVIIVTAGAP-----KI-----PEPLIEQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp EEEEECSBBS-----SC-----CHHHHHTEEEEEEEEEEECSSS
T ss_pred cEEEECCcHH-----HH-----HHHHHHhcCCCcEEEEEEecCC
Confidence 9999864321 11 1367889999999999887544
No 167
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.09 E-value=9.6e-10 Score=100.21 Aligned_cols=79 Identities=10% Similarity=0.009 Sum_probs=63.6
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccc-ccccC----C
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFS-PSEDA----S 214 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~-~l~~~----~ 214 (345)
++.+||++|||+|.++..+.+..|+.+|++||++|.+++.|++....... ..+++++.+|+.+ ++... +
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~------~~~v~~~~~d~~~~~~~~~~~~~~ 138 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNL------SDLIKVVKVPQKTLLMDALKEESE 138 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC------TTTEEEEECCTTCSSTTTSTTCCS
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCC------CccEEEEEcchhhhhhhhhhcccC
Confidence 46789999999999998888777789999999999999999998753321 3579999999877 23221 2
Q ss_pred CcccEEEEcC
Q 038076 215 GRYAGIVVDL 224 (345)
Q Consensus 215 ~~yD~Ii~D~ 224 (345)
++||+|+++.
T Consensus 139 ~~fD~i~~np 148 (254)
T 2h00_A 139 IIYDFCMCNP 148 (254)
T ss_dssp CCBSEEEECC
T ss_pred CcccEEEECC
Confidence 6899999984
No 168
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.08 E-value=3.6e-10 Score=104.46 Aligned_cols=103 Identities=19% Similarity=0.279 Sum_probs=82.7
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|..+..+.+ ++.+|+++|+++.+++.|++.+ ++++++.+|+.++- .+++||
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~------------~~~~~~~~d~~~~~--~~~~fD 119 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY------------PHLHFDVADARNFR--VDKPLD 119 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC------------TTSCEEECCTTTCC--CSSCEE
T ss_pred CCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC------------CCCEEEECChhhCC--cCCCcC
Confidence 4567999999999999999987 6789999999999999999875 24778999998853 257899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
+|++...-. .++ ...++++++++.|+|||.+++......
T Consensus 120 ~v~~~~~l~-~~~---d~~~~l~~~~~~LkpgG~l~~~~~~~~ 158 (279)
T 3ccf_A 120 AVFSNAMLH-WVK---EPEAAIASIHQALKSGGRFVAEFGGKG 158 (279)
T ss_dssp EEEEESCGG-GCS---CHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred EEEEcchhh-hCc---CHHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 999843211 111 235789999999999999998876543
No 169
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.08 E-value=1.7e-10 Score=103.32 Aligned_cols=110 Identities=15% Similarity=0.119 Sum_probs=83.4
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhC-----CCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccc-
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLW-----PSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSE- 211 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~-----p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~- 211 (345)
..+..+||+||||+|..+..+.+.. |..+|+++|+++.+++.|++++..... .....++++++.+|+.+...
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~v~~~~~d~~~~~~~ 155 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKP--ELLKIDNFKIIHKNIYQVNEE 155 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCG--GGGSSTTEEEEECCGGGCCHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCc--cccccCCEEEEECChHhcccc
Confidence 4566899999999999999998875 467999999999999999988742110 00003579999999988531
Q ss_pred --cCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 212 --DASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 212 --~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
...++||+|+++.... + +++.+.+.|+|||++++.+..
T Consensus 156 ~~~~~~~fD~I~~~~~~~-----~-----~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 156 EKKELGLFDAIHVGASAS-----E-----LPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHHHCCEEEEEECSBBS-----S-----CCHHHHHHEEEEEEEEEEEEE
T ss_pred cCccCCCcCEEEECCchH-----H-----HHHHHHHhcCCCcEEEEEEcc
Confidence 2356899999875332 1 247788999999999999875
No 170
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.08 E-value=2.4e-10 Score=111.45 Aligned_cols=119 Identities=14% Similarity=0.133 Sum_probs=87.9
Q ss_pred cchHHHHHhhccccCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEc
Q 038076 125 TGSYWDEFVSLPAIVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIG 204 (345)
Q Consensus 125 ~~~Y~~~~~~l~~~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~g 204 (345)
...|.+++..-....+.+.||+||||+|.++..+++. ...+|++||.++ +++.|++......+ ..+++++.+
T Consensus 68 t~aY~~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~a-GA~~V~ave~s~-~~~~a~~~~~~n~~------~~~i~~i~~ 139 (376)
T 4hc4_A 68 TDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQA-GARRVYAVEASA-IWQQAREVVRFNGL------EDRVHVLPG 139 (376)
T ss_dssp HHHHHHHHHTTHHHHTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-THHHHHHHHHHTTC------TTTEEEEES
T ss_pred HHHHHHHHHhCHHhcCCCEEEEeCCCccHHHHHHHHh-CCCEEEEEeChH-HHHHHHHHHHHcCC------CceEEEEee
Confidence 4456665543322335788999999999999877764 557999999997 78889887654332 578999999
Q ss_pred ccccccccCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEE
Q 038076 205 DVFSPSEDASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFM 254 (345)
Q Consensus 205 Da~~~l~~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlv 254 (345)
|..+. ..++++|+|++..... ....+-.-..++....+.|+|||+++
T Consensus 140 ~~~~~--~lpe~~DvivsE~~~~-~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 140 PVETV--ELPEQVDAIVSEWMGY-GLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp CTTTC--CCSSCEEEEECCCCBT-TBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred eeeee--cCCccccEEEeecccc-cccccchhhhHHHHHHhhCCCCceEC
Confidence 99886 3568999999876543 22233344567888889999999987
No 171
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.07 E-value=1.5e-10 Score=109.00 Aligned_cols=119 Identities=11% Similarity=0.032 Sum_probs=84.1
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccc-----ccCC
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPS-----EDAS 214 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l-----~~~~ 214 (345)
++.+||+||||+|..+..+.+. +..+++++|+++.+++.|++.+.............+++++.+|+.+.. ...+
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 5789999999999999988873 678999999999999999987631100000001347999999998862 2234
Q ss_pred CcccEEEEcCCCCCCCCCCc-chHHHHHHHHhccCCCcEEEEEecCC
Q 038076 215 GRYAGIVVDLFSEGKVLPQL-EEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~~~p~~l-~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
++||+|++...-+ ....+. ....+++++++.|+|||.+++.+.+.
T Consensus 113 ~~fD~V~~~~~l~-~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 113 MCFDICSCQFVCH-YSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp CCEEEEEEETCGG-GGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CCEEEEEEecchh-hccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 5899999843211 110111 23589999999999999999887643
No 172
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.07 E-value=5.2e-10 Score=106.28 Aligned_cols=110 Identities=18% Similarity=0.148 Sum_probs=84.5
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
+..+||+||||+|..+..+++.+|+.+++++|+ |.+++.|++++.-.. ..+|++++.+|..+.+ +..||+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~------~~~~v~~~~~d~~~~~---p~~~D~ 238 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTG------LSGRAQVVVGSFFDPL---PAGAGG 238 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT------CTTTEEEEECCTTSCC---CCSCSE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcC------cCcCeEEecCCCCCCC---CCCCcE
Confidence 457999999999999999999999999999999 999999999874322 1468999999997432 338999
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
|++-..-. +.+. -...++++++++.|+|||.+++.-...+
T Consensus 239 v~~~~vlh-~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 278 (332)
T 3i53_A 239 YVLSAVLH-DWDD-LSAVAILRRCAEAAGSGGVVLVIEAVAG 278 (332)
T ss_dssp EEEESCGG-GSCH-HHHHHHHHHHHHHHTTTCEEEEEECCCC
T ss_pred EEEehhhc-cCCH-HHHHHHHHHHHHhcCCCCEEEEEeecCC
Confidence 99832111 1111 1236799999999999999988654433
No 173
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.06 E-value=2.9e-10 Score=101.61 Aligned_cols=111 Identities=20% Similarity=0.205 Sum_probs=82.7
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLW-PSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGR 216 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~-p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~ 216 (345)
..+..+||+||||+|..+..+.+.. +..+|+++|+++.+++.|++++...... ....++++++.+|+..... ...+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~~~~~~v~~~~~d~~~~~~-~~~~ 151 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPT--LLSSGRVQLVVGDGRMGYA-EEAP 151 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTH--HHHTSSEEEEESCGGGCCG-GGCC
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc--ccCCCcEEEEECCcccCcc-cCCC
Confidence 3567899999999999999998774 5579999999999999999876421000 0002479999999986432 3568
Q ss_pred ccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 217 YAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
||+|+++.... + +++.+.+.|+|||.+++.+....
T Consensus 152 fD~i~~~~~~~-----~-----~~~~~~~~LkpgG~lv~~~~~~~ 186 (226)
T 1i1n_A 152 YDAIHVGAAAP-----V-----VPQALIDQLKPGGRLILPVGPAG 186 (226)
T ss_dssp EEEEEECSBBS-----S-----CCHHHHHTEEEEEEEEEEESCTT
T ss_pred cCEEEECCchH-----H-----HHHHHHHhcCCCcEEEEEEecCC
Confidence 99999875331 1 23678899999999999887543
No 174
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.06 E-value=3.5e-10 Score=108.00 Aligned_cols=117 Identities=10% Similarity=0.121 Sum_probs=84.9
Q ss_pred HHHHHhhccccCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccc
Q 038076 128 YWDEFVSLPAIVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVF 207 (345)
Q Consensus 128 Y~~~~~~l~~~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~ 207 (345)
|.+.+.......++++||+||||+|.++..+.+. +..+|++||+++ +++.|++.+.... ..++++++.+|+.
T Consensus 26 y~~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~------~~~~i~~~~~d~~ 97 (328)
T 1g6q_1 26 YRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMSS-IIEMAKELVELNG------FSDKITLLRGKLE 97 (328)
T ss_dssp HHHHHHHHHHHHTTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESST-HHHHHHHHHHHTT------CTTTEEEEESCTT
T ss_pred HHHHHHhhHhhcCCCEEEEecCccHHHHHHHHHC-CCCEEEEEChHH-HHHHHHHHHHHcC------CCCCEEEEECchh
Confidence 4444432222345789999999999999998875 557999999995 8999998874322 1468999999998
Q ss_pred cccccCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEE
Q 038076 208 SPSEDASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFM 254 (345)
Q Consensus 208 ~~l~~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlv 254 (345)
+. ....++||+|+++..... ....-.-.+++..+++.|+|||.++
T Consensus 98 ~~-~~~~~~~D~Ivs~~~~~~-l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 98 DV-HLPFPKVDIIISEWMGYF-LLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp TS-CCSSSCEEEEEECCCBTT-BSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hc-cCCCCcccEEEEeCchhh-cccHHHHHHHHHHHHhhcCCCeEEE
Confidence 85 223478999999753221 1122233578899999999999997
No 175
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.06 E-value=3.3e-10 Score=96.52 Aligned_cols=102 Identities=19% Similarity=0.189 Sum_probs=80.8
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+||++|||+|..+..+.+.. .+++++|+++.+++.+++.. ++++++.+| +...+++||
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~------------~~v~~~~~d----~~~~~~~~D 77 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEKF------------DSVITLSDP----KEIPDNSVD 77 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHHC------------TTSEEESSG----GGSCTTCEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHhC------------CCcEEEeCC----CCCCCCceE
Confidence 456799999999999999998765 39999999999999999971 368899999 233568999
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
+|++...-. ..+ ...++++++++.|+|||.+++..+....
T Consensus 78 ~v~~~~~l~-~~~---~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 117 (170)
T 3i9f_A 78 FILFANSFH-DMD---DKQHVISEVKRILKDDGRVIIIDWRKEN 117 (170)
T ss_dssp EEEEESCST-TCS---CHHHHHHHHHHHEEEEEEEEEEEECSSC
T ss_pred EEEEccchh-ccc---CHHHHHHHHHHhcCCCCEEEEEEcCccc
Confidence 999853221 111 2468999999999999999988665543
No 176
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.06 E-value=4.3e-10 Score=100.93 Aligned_cols=111 Identities=21% Similarity=0.255 Sum_probs=82.5
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCC------CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWP------SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSE 211 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p------~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~ 211 (345)
..+..+||+||||+|..+..+.+..+ ..+|+++|+++.+++.|++++..... .....++++++.+|+.+.+.
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~v~~~~~d~~~~~~ 159 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDR--SMLDSGQLLIVEGDGRKGYP 159 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHH--HHHHHTSEEEEESCGGGCCG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCc--cccCCCceEEEECCcccCCC
Confidence 34567999999999999999887644 36999999999999999987641100 00002479999999988443
Q ss_pred cCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 212 DASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 212 ~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
..++||+|+++.... + +.+.+.+.|+|||.+++.+....
T Consensus 160 -~~~~fD~I~~~~~~~-----~-----~~~~~~~~LkpgG~lvi~~~~~~ 198 (227)
T 1r18_A 160 -PNAPYNAIHVGAAAP-----D-----TPTELINQLASGGRLIVPVGPDG 198 (227)
T ss_dssp -GGCSEEEEEECSCBS-----S-----CCHHHHHTEEEEEEEEEEESCSS
T ss_pred -cCCCccEEEECCchH-----H-----HHHHHHHHhcCCCEEEEEEecCC
Confidence 246899999875432 1 22678899999999999987543
No 177
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.06 E-value=6.9e-10 Score=108.09 Aligned_cols=114 Identities=12% Similarity=-0.010 Sum_probs=88.7
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc---CCCc
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED---ASGR 216 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~---~~~~ 216 (345)
+.++||++|||+|.++..+++. ..+|++||+++.+++.|++++..... ++++++.+|+.+++.. .+++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~-------~~~~~~~~d~~~~~~~~~~~~~~ 279 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGL-------GNVRVLEANAFDLLRRLEKEGER 279 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTC-------TTEEEEESCHHHHHHHHHHTTCC
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCC-------CCceEEECCHHHHHHHHHhcCCC
Confidence 5679999999999999999886 67999999999999999998864431 2499999999998753 2678
Q ss_pred ccEEEEcCCCCCCCCCCc-----chHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 217 YAGIVVDLFSEGKVLPQL-----EEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~l-----~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
||+|++|.+.-..-.... .-.+++..+.+.|+|||++++.+.+...
T Consensus 280 fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 330 (382)
T 1wxx_A 280 FDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHM 330 (382)
T ss_dssp EEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS
T ss_pred eeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCC
Confidence 999999864421111111 1246888999999999999887765544
No 178
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.06 E-value=2.4e-10 Score=103.88 Aligned_cols=107 Identities=9% Similarity=-0.041 Sum_probs=85.6
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+|++||||+|.++..+.+..|..+|+++|+||..++.|+++...... ..+++++.+|+.+-+.. .++||
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl------~~~i~~~~~d~l~~l~~-~~~~D 86 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGL------KEKIQVRLANGLAAFEE-TDQVS 86 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC------TTTEEEEECSGGGGCCG-GGCCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC------CceEEEEECchhhhccc-CcCCC
Confidence 455789999999999999999887888999999999999999998754332 35899999999876642 23799
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
+|++-. +.. -.-.+++..+.++|+++|.++++-.
T Consensus 87 ~IviaG-----~Gg-~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 87 VITIAG-----MGG-RLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp EEEEEE-----ECH-HHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred EEEEcC-----CCh-HHHHHHHHHHHHHhCCCCEEEEECC
Confidence 998731 111 1246889999999999999998766
No 179
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.05 E-value=3.7e-10 Score=99.65 Aligned_cols=123 Identities=12% Similarity=0.095 Sum_probs=88.3
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccc-----c
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSE-----D 212 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~-----~ 212 (345)
+.+..+||+||||+|..+..+.+. ..+|++||++|. .. .++++++.+|+.+.-. .
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~-----------~~-------~~~v~~~~~D~~~~~~~~~~~~ 82 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEM-----------EE-------IAGVRFIRCDIFKETIFDDIDR 82 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCC-----------CC-------CTTCEEEECCTTSSSHHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEecccc-----------cc-------CCCeEEEEccccCHHHHHHHHH
Confidence 356789999999999999999876 789999999974 11 3579999999887421 0
Q ss_pred -C----CCcccEEEEcCCCCCC-C--CCCc----chHHHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchH
Q 038076 213 -A----SGRYAGIVVDLFSEGK-V--LPQL----EEVATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVW 280 (345)
Q Consensus 213 -~----~~~yD~Ii~D~f~~~~-~--p~~l----~t~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~ 280 (345)
. .++||+|++|...... . ..+. .....++.+.+.|+|||.+++-++....
T Consensus 83 ~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~------------------ 144 (191)
T 3dou_A 83 ALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM------------------ 144 (191)
T ss_dssp HHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH------------------
T ss_pred HhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC------------------
Confidence 0 1489999999743211 0 0010 1135678889999999999988875442
Q ss_pred HHHHHHHHHHHHCCCCEEEE
Q 038076 281 MHNSAIRALSEAFPGKVSWK 300 (345)
Q Consensus 281 ~~~~~~~~l~~~F~~~v~~~ 300 (345)
...+...+++.|. .|.+.
T Consensus 145 -~~~~~~~l~~~F~-~v~~~ 162 (191)
T 3dou_A 145 -TNDFIAIWRKNFS-SYKIS 162 (191)
T ss_dssp -HHHHHHHHGGGEE-EEEEE
T ss_pred -HHHHHHHHHHhcC-EEEEE
Confidence 4577888888998 66643
No 180
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.05 E-value=2.1e-09 Score=92.57 Aligned_cols=101 Identities=6% Similarity=-0.050 Sum_probs=75.9
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||++|||+|.++..+.+.. +|++||+|+.+++. . ++++++.+|+.+.+. +++||
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~-------~---------~~~~~~~~d~~~~~~--~~~fD 80 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES-------H---------RGGNLVRADLLCSIN--QESVD 80 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT-------C---------SSSCEEECSTTTTBC--GGGCS
T ss_pred CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc-------c---------cCCeEEECChhhhcc--cCCCC
Confidence 356799999999999999998764 99999999999997 1 357899999988653 38999
Q ss_pred EEEEcCCCCCCCCC-----CcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 219 GIVVDLFSEGKVLP-----QLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~-----~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
+|+++..-...... .....++++.+.+.| |||.+++......
T Consensus 81 ~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~ 127 (170)
T 3q87_B 81 VVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEAN 127 (170)
T ss_dssp EEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGG
T ss_pred EEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCC
Confidence 99996422111000 112356888888888 9999988775443
No 181
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.05 E-value=6.7e-10 Score=97.95 Aligned_cols=102 Identities=16% Similarity=0.042 Sum_probs=80.5
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
++.+||+||||+|..+..+ +..+++++|+++.+++.|++.+ ++++++.+|+.+. ...+++||+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~------------~~~~~~~~d~~~~-~~~~~~fD~ 98 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA------------PEATWVRAWGEAL-PFPGESFDV 98 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC------------TTSEEECCCTTSC-CSCSSCEEE
T ss_pred CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC------------CCcEEEEcccccC-CCCCCcEEE
Confidence 6789999999999998876 2239999999999999999976 2478899998874 334678999
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
|++...-. ..+ ...++++++++.|+|||.+++.......
T Consensus 99 v~~~~~l~-~~~---~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 137 (211)
T 2gs9_A 99 VLLFTTLE-FVE---DVERVLLEARRVLRPGGALVVGVLEALS 137 (211)
T ss_dssp EEEESCTT-TCS---CHHHHHHHHHHHEEEEEEEEEEEECTTS
T ss_pred EEEcChhh-hcC---CHHHHHHHHHHHcCCCCEEEEEecCCcC
Confidence 99853221 122 2468999999999999999998876553
No 182
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.04 E-value=4.9e-10 Score=109.85 Aligned_cols=113 Identities=12% Similarity=-0.015 Sum_probs=82.9
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+.++||++|||+|..+..+++. +.+|++||++|.+++.|++++..... + .+++.+|+.+++....++||
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~--ga~V~avDis~~al~~a~~n~~~ng~------~--~~~~~~D~~~~l~~~~~~fD 282 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARK--GAYALAVDKDLEALGVLDQAALRLGL------R--VDIRHGEALPTLRGLEGPFH 282 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTC------C--CEEEESCHHHHHHTCCCCEE
T ss_pred cCCCeEEEcccchhHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHhCC------C--CcEEEccHHHHHHHhcCCCC
Confidence 34789999999999999999875 45599999999999999998854321 1 24669999998865444599
Q ss_pred EEEEcCCCCCCCCCCc-----chHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 219 GIVVDLFSEGKVLPQL-----EEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l-----~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
+|++|...-..-.... .-.++++.+.+.|+|||.+++...+..
T Consensus 283 ~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 283 HVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp EEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred EEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 9999864311000111 124788889999999999985444443
No 183
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.04 E-value=5.2e-10 Score=106.94 Aligned_cols=109 Identities=15% Similarity=0.153 Sum_probs=84.2
Q ss_pred CCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccEE
Q 038076 141 NGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAGI 220 (345)
Q Consensus 141 p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~I 220 (345)
+.+||+||||+|..+..+.+.+|+.+++++|+ |.+++.|++++...+ ..+|++++.+|..+.-...++.||+|
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~------~~~~v~~~~~d~~~~~~~~~~~~D~v 252 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHD------LGGRVEFFEKNLLDARNFEGGAADVV 252 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT------CGGGEEEEECCTTCGGGGTTCCEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcC------CCCceEEEeCCcccCcccCCCCccEE
Confidence 78999999999999999999999999999999 999999998874322 14689999999987532245679999
Q ss_pred EEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 221 VVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 221 i~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
++-..-+ ..+. -....+++++++.|+|||.+++.-.
T Consensus 253 ~~~~vlh-~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (352)
T 3mcz_A 253 MLNDCLH-YFDA-REAREVIGHAAGLVKPGGALLILTM 288 (352)
T ss_dssp EEESCGG-GSCH-HHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEecccc-cCCH-HHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 9832111 1111 1226799999999999999887643
No 184
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.04 E-value=2.9e-10 Score=110.91 Aligned_cols=110 Identities=10% Similarity=-0.076 Sum_probs=86.9
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCC--------CCCCcEEEEEcccccccc
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPT--------ATGGVLQVHIGDVFSPSE 211 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~--------~~~~rv~v~~gDa~~~l~ 211 (345)
++.+||++|||+|..+..+++..+..+|+++|+||..++.++++.......... ..-.+++++.+|+.+++.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 578999999999999999998877789999999999999999887533000000 001239999999999876
Q ss_pred cCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEe
Q 038076 212 DASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 212 ~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
...++||+|++|.|.. ..++++.+.+.|+|||++.+.+
T Consensus 127 ~~~~~fD~I~lDP~~~--------~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDPFGS--------PMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECCSSC--------CHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCCCCC--------HHHHHHHHHHhcCCCCEEEEEe
Confidence 5567899999986532 2589999999999999998876
No 185
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.04 E-value=6.1e-10 Score=96.94 Aligned_cols=125 Identities=17% Similarity=0.109 Sum_probs=87.2
Q ss_pred ccCCCCCEEEEeecccHHHHHHHHhCCC---------CEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEE-Eccc
Q 038076 137 AIVPNGPIAIYGLGGGTAAHLMLDLWPS---------LKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVH-IGDV 206 (345)
Q Consensus 137 ~~~~p~~VLiIG~G~G~~~~~l~~~~p~---------~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~-~gDa 206 (345)
.+.+..+||+||||+|.++..+.+..+. .+|+++|+++.. . .++++++ .+|.
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~--------~----------~~~~~~~~~~d~ 80 (196)
T 2nyu_A 19 ILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF--------P----------LEGATFLCPADV 80 (196)
T ss_dssp CCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC--------C----------CTTCEEECSCCT
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc--------c----------CCCCeEEEeccC
Confidence 3456789999999999999999988664 799999999831 1 2457888 8887
Q ss_pred ccccc-------cCCCcccEEEEcCCCCCCCCCCcch--------HHHHHHHHhccCCCcEEEEEecCCCCCCccccCCC
Q 038076 207 FSPSE-------DASGRYAGIVVDLFSEGKVLPQLEE--------VATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAA 271 (345)
Q Consensus 207 ~~~l~-------~~~~~yD~Ii~D~f~~~~~p~~l~t--------~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~ 271 (345)
.+.-. ..+++||+|++|...... ..+... ..+++.+.+.|+|||.+++..+....
T Consensus 81 ~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~--------- 150 (196)
T 2nyu_A 81 TDPRTSQRILEVLPGRRADVILSDMAPNAT-GFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQ--------- 150 (196)
T ss_dssp TSHHHHHHHHHHSGGGCEEEEEECCCCCCC-SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGG---------
T ss_pred CCHHHHHHHHHhcCCCCCcEEEeCCCCCCC-CCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCcc---------
Confidence 65321 123589999997522111 011111 36889999999999999998764432
Q ss_pred CCCCccchHHHHHHHHHHHHHCCCCEEEE
Q 038076 272 RPKSMNDVWMHNSAIRALSEAFPGKVSWK 300 (345)
Q Consensus 272 ~~~~~d~~~~~~~~~~~l~~~F~~~v~~~ 300 (345)
...+...+++.|. .+.+.
T Consensus 151 ----------~~~~~~~l~~~f~-~v~~~ 168 (196)
T 2nyu_A 151 ----------SRRLQRRLTEEFQ-NVRII 168 (196)
T ss_dssp ----------GHHHHHHHHHHEE-EEEEE
T ss_pred ----------HHHHHHHHHHHhc-ceEEE
Confidence 3456667778887 55543
No 186
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.03 E-value=1.2e-09 Score=105.64 Aligned_cols=108 Identities=15% Similarity=0.161 Sum_probs=83.6
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+||+||||+|..+..+++.+|+.+++++|+ |.+++.|++++...+ ..++++++.+|..+.+ +..||
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~------l~~~v~~~~~d~~~~~---p~~~D 270 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRG------LADRCEILPGDFFETI---PDGAD 270 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT------CTTTEEEEECCTTTCC---CSSCS
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcC------cCCceEEeccCCCCCC---CCCce
Confidence 4568999999999999999999999999999999 999999999874322 1468999999998432 33899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
+|++-..-. ..+ .-...++++++++.|+|||.+++.-.
T Consensus 271 ~v~~~~vlh-~~~-d~~~~~~L~~~~~~L~pgG~l~i~e~ 308 (369)
T 3gwz_A 271 VYLIKHVLH-DWD-DDDVVRILRRIATAMKPDSRLLVIDN 308 (369)
T ss_dssp EEEEESCGG-GSC-HHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred EEEhhhhhc-cCC-HHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 999742211 111 11223689999999999999887543
No 187
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.03 E-value=2.4e-10 Score=107.08 Aligned_cols=104 Identities=10% Similarity=-0.066 Sum_probs=86.1
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
..+..+||++|||.|.++..+++. +..+|+++|+||..++.++++...... ..+++++.+|++++.. ...|
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~N~v------~~~v~~~~~D~~~~~~--~~~~ 193 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKV------EDRMSAYNMDNRDFPG--ENIA 193 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTC------TTTEEEECSCTTTCCC--CSCE
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHHcCC------CCcEEEEeCcHHHhcc--ccCC
Confidence 356789999999999999988875 557999999999999999998866543 5689999999999864 5789
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
|.|+++.+. .+.+|+..+.+.|+|||++.+...
T Consensus 194 D~Vi~~~p~--------~~~~~l~~a~~~lk~gG~ih~~~~ 226 (278)
T 3k6r_A 194 DRILMGYVV--------RTHEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp EEEEECCCS--------SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred CEEEECCCC--------cHHHHHHHHHHHcCCCCEEEEEee
Confidence 999986422 345789999999999999876543
No 188
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.03 E-value=2.8e-10 Score=109.06 Aligned_cols=102 Identities=16% Similarity=0.057 Sum_probs=83.7
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+||++|||+|.++.. ++ +..+|++||+||.+++.|++++..... .++++++.+|+.+++ ++||
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l------~~~v~~~~~D~~~~~----~~fD 260 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKL------EHKIIPILSDVREVD----VKGN 260 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTC------TTTEEEEESCGGGCC----CCEE
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCC------CCcEEEEECChHHhc----CCCc
Confidence 4678999999999999988 65 578999999999999999998864432 357999999999986 7899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
+|++|... ...++++.+.+.|+|||.+++......
T Consensus 261 ~Vi~dpP~--------~~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 261 RVIMNLPK--------FAHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp EEEECCTT--------TGGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred EEEECCcH--------hHHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 99997422 123789999999999999887655433
No 189
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.03 E-value=4e-10 Score=100.16 Aligned_cols=108 Identities=13% Similarity=0.012 Sum_probs=78.5
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHH----HHhcCCCCCCCCCCCCCcEEEEEcccccccccCC
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKV----RDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDAS 214 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A----~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~ 214 (345)
.+..+||+||||+|.++..+.+.+|+.+|++||+++.+++.+ ++..... .-++++++++|+.+. ....
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~-------~~~~v~~~~~d~~~l-~~~~ 97 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKG-------GLPNLLYLWATAERL-PPLS 97 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGT-------CCTTEEEEECCSTTC-CSCC
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhc-------CCCceEEEecchhhC-CCCC
Confidence 456789999999999999999999999999999999988853 2222111 135799999999984 3334
Q ss_pred CcccEEEEcCCCCC----CCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 215 GRYAGIVVDLFSEG----KVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~----~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
+. |.|++...... .++. ..++++++++.|+|||.+++.+.
T Consensus 98 ~~-d~v~~~~~~~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 98 GV-GELHVLMPWGSLLRGVLGS---SPEMLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp CE-EEEEEESCCHHHHHHHHTS---SSHHHHHHHHTEEEEEEEEEEEE
T ss_pred CC-CEEEEEccchhhhhhhhcc---HHHHHHHHHHHcCCCcEEEEEec
Confidence 45 87774331110 0011 15789999999999999998654
No 190
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.02 E-value=2.4e-09 Score=99.36 Aligned_cols=109 Identities=12% Similarity=0.173 Sum_probs=76.2
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccc-ccccCCCc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFS-PSEDASGR 216 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~-~l~~~~~~ 216 (345)
..+..+||+||||+|.++..+.+. +.+|++||+++.|++.|++..... .+.....|... .....+++
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~----------~v~~~~~~~~~~~~~~~~~~ 110 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADR----------CVTIDLLDITAEIPKELAGH 110 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSS----------CCEEEECCTTSCCCGGGTTC
T ss_pred CCCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhc----------cceeeeeecccccccccCCC
Confidence 346679999999999999999875 579999999999999999987421 23333333221 01123578
Q ss_pred ccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 217 YAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
||+|+++..-. .++. -....+++.+.+.| |||.+++.+....
T Consensus 111 fD~Vv~~~~l~-~~~~-~~~~~~l~~l~~lL-PGG~l~lS~~~g~ 152 (261)
T 3iv6_A 111 FDFVLNDRLIN-RFTT-EEARRACLGMLSLV-GSGTVRASVKLGF 152 (261)
T ss_dssp CSEEEEESCGG-GSCH-HHHHHHHHHHHHHH-TTSEEEEEEEBSC
T ss_pred ccEEEEhhhhH-hCCH-HHHHHHHHHHHHhC-cCcEEEEEeccCc
Confidence 99999864221 1111 12346899999999 9999999876443
No 191
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.02 E-value=5.8e-10 Score=108.99 Aligned_cols=116 Identities=10% Similarity=0.015 Sum_probs=88.6
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc---CCCc
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED---ASGR 216 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~---~~~~ 216 (345)
+.++||++|||+|+++..+++. +..+|++||+++.+++.|++++..... +++++++.+|+.+++.. ..++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~------~~~v~~~~~d~~~~~~~~~~~~~~ 289 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGV------EDRMKFIVGSAFEEMEKLQKKGEK 289 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTC------GGGEEEEESCHHHHHHHHHHTTCC
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCC------CccceEEECCHHHHHHHHHhhCCC
Confidence 6789999999999999999875 456999999999999999998864431 23899999999988653 3678
Q ss_pred ccEEEEcCCCCCCCCCC-----cchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 217 YAGIVVDLFSEGKVLPQ-----LEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~-----l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
||+|++|.......... -...+++..+.+.|+|||++++...+...
T Consensus 290 fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 340 (396)
T 2as0_A 290 FDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHV 340 (396)
T ss_dssp EEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTS
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCC
Confidence 99999986432110111 11346888999999999988877665543
No 192
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.02 E-value=1.1e-10 Score=105.69 Aligned_cols=110 Identities=11% Similarity=-0.111 Sum_probs=77.3
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECC-HHHHHHH---HHhcCCCCCCCCCCCCCcEEEEEcccccccccCC
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEID-EILIDKV---RDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDAS 214 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEid-p~vi~~A---~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~ 214 (345)
.++.+||+||||+|..+..+.+..|+.+|++||++ +.|++.| ++...... -++++++.+|+.++-....
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~-------~~~v~~~~~d~~~l~~~~~ 95 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGG-------LSNVVFVIAAAESLPFELK 95 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTC-------CSSEEEECCBTTBCCGGGT
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcC-------CCCeEEEEcCHHHhhhhcc
Confidence 35678999999999999999877788999999999 7787776 66543221 3579999999988722123
Q ss_pred CcccEEEEcCCCCCCC-CCCcchHHHHHHHHhccCCCcEEEE
Q 038076 215 GRYAGIVVDLFSEGKV-LPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~~~-p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
..+|.|.+....+... .......++++++++.|+|||.+++
T Consensus 96 d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 96 NIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp TCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred CeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 4556665532111000 0001125689999999999999988
No 193
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.02 E-value=1e-09 Score=105.58 Aligned_cols=108 Identities=17% Similarity=0.120 Sum_probs=83.1
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|.++..+.+.+|+.+++++|+ |.+++.|++.+.... ..++++++.+|..+.+ +..||
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~------~~~~v~~~~~d~~~~~---~~~~D 250 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAG------LADRVTVAEGDFFKPL---PVTAD 250 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT------CTTTEEEEECCTTSCC---SCCEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcC------CCCceEEEeCCCCCcC---CCCCC
Confidence 3567999999999999999999999999999999 999999998874222 1358999999998743 33599
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
+|++...-. ..+. -...++++++++.|+|||.+++.-.
T Consensus 251 ~v~~~~vl~-~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 251 VVLLSFVLL-NWSD-EDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEESCGG-GSCH-HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEEecccc-CCCH-HHHHHHHHHHHHhcCCCcEEEEEec
Confidence 999843221 1111 1124799999999999998887654
No 194
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.02 E-value=5.1e-10 Score=102.70 Aligned_cols=99 Identities=13% Similarity=0.172 Sum_probs=80.9
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|..+..+.+..|+.+++++|+++.+++.|++.. ++++++.+|+.+. ...+++||
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~------------~~~~~~~~d~~~~-~~~~~~fD 150 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY------------PQVTFCVASSHRL-PFSDTSMD 150 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC------------TTSEEEECCTTSC-SBCTTCEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC------------CCcEEEEcchhhC-CCCCCcee
Confidence 3567999999999999999998877889999999999999999875 2478999998764 33457899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
+|++.. . + .+++++.+.|+|||.+++......
T Consensus 151 ~v~~~~-~----~------~~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 151 AIIRIY-A----P------CKAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp EEEEES-C----C------CCHHHHHHHEEEEEEEEEEEECTT
T ss_pred EEEEeC-C----h------hhHHHHHHhcCCCcEEEEEEcCHH
Confidence 999631 1 1 258899999999999998876554
No 195
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.02 E-value=4.1e-11 Score=108.30 Aligned_cols=104 Identities=12% Similarity=0.073 Sum_probs=80.1
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
++.+||++|||+|..+..+.+. +.+|+++|++|.+++.|++.+..... .++++++.+|+.++. .+++||+
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~~~d~~~~~--~~~~~D~ 147 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT--GMRVIAIDIDPVKIALARNNAEVYGI------ADKIEFICGDFLLLA--SFLKADV 147 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC------GGGEEEEESCHHHHG--GGCCCSE
T ss_pred CCCEEEECccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCC------CcCeEEEECChHHhc--ccCCCCE
Confidence 5789999999999999999975 48999999999999999988753221 258999999999976 4579999
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEe
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
|++|..-... . .....+..+++.|+|||.+++..
T Consensus 148 v~~~~~~~~~-~---~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 148 VFLSPPWGGP-D---YATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp EEECCCCSSG-G---GGGSSSBCTTTSCSSCHHHHHHH
T ss_pred EEECCCcCCc-c---hhhhHHHHHHhhcCCcceeHHHH
Confidence 9997533211 0 01114456788999999977654
No 196
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.01 E-value=9.3e-10 Score=107.59 Aligned_cols=118 Identities=14% Similarity=-0.024 Sum_probs=89.6
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc---CCC
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED---ASG 215 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~---~~~ 215 (345)
.+.++||++|||+|.++..+++. ...+|++||+++.+++.|++++..... .+++++++.+|+.+++.. .++
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~-g~~~V~~vD~s~~al~~a~~n~~~ngl-----~~~~v~~~~~D~~~~~~~~~~~~~ 292 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMG-GCSQVVSVDTSQEALDIARQNVELNKL-----DLSKAEFVRDDVFKLLRTYRDRGE 292 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTC-----CGGGEEEEESCHHHHHHHHHHTTC
T ss_pred hCCCeEEEeeccCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCC-----CccceEEEECCHHHHHHHHHhcCC
Confidence 46789999999999999999875 356999999999999999998864321 012799999999998753 257
Q ss_pred cccEEEEcCCCCCC----CCCC-cchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 216 RYAGIVVDLFSEGK----VLPQ-LEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~----~p~~-l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
+||+|++|.+.... .... -.-.+++..+.+.|+|||++++.+.....
T Consensus 293 ~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 344 (396)
T 3c0k_A 293 KFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLM 344 (396)
T ss_dssp CEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTC
T ss_pred CCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC
Confidence 89999999643211 1111 12357889999999999999887765543
No 197
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.00 E-value=5.4e-10 Score=117.18 Aligned_cols=118 Identities=14% Similarity=0.065 Sum_probs=90.4
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+.++||++|||+|.++..+++. ...+|++||+|+.+++.|++++..... .+.+++++.+|+.+++....++||
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~-ga~~V~aVD~s~~al~~a~~N~~~ngl-----~~~~v~~i~~D~~~~l~~~~~~fD 611 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLG-GARSTTTVDMSRTYLEWAERNLRLNGL-----TGRAHRLIQADCLAWLREANEQFD 611 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTC-----CSTTEEEEESCHHHHHHHCCCCEE
T ss_pred cCCCcEEEeeechhHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCC-----CccceEEEecCHHHHHHhcCCCcc
Confidence 35789999999999999988863 346799999999999999998865432 135899999999999877778999
Q ss_pred EEEEcCCCCC--CCCCC-c----chHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 219 GIVVDLFSEG--KVLPQ-L----EEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 219 ~Ii~D~f~~~--~~p~~-l----~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
+|++|.+.-. .-... + .-.+++..+.+.|+|||++++.+.....
T Consensus 612 ~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~ 662 (703)
T 3v97_A 612 LIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGF 662 (703)
T ss_dssp EEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTC
T ss_pred EEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccc
Confidence 9999975421 00000 1 1245688889999999999987765443
No 198
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.00 E-value=7.2e-10 Score=101.52 Aligned_cols=103 Identities=10% Similarity=0.082 Sum_probs=80.1
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|..+..+.+. +.+++++|+++.+++.|++... .+ ++.+|+.+. ...+++||
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~-----------~~--~~~~d~~~~-~~~~~~fD 116 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGV-----------KN--VVEAKAEDL-PFPSGAFE 116 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTC-----------SC--EEECCTTSC-CSCTTCEE
T ss_pred CCCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcC-----------CC--EEECcHHHC-CCCCCCEE
Confidence 36789999999999999998875 5799999999999999999753 11 788898774 33467899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
+|++..... ..... ..++++++++.|+|||.+++.+.+.
T Consensus 117 ~v~~~~~~~-~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 117 AVLALGDVL-SYVEN--KDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp EEEECSSHH-HHCSC--HHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred EEEEcchhh-hcccc--HHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 999742110 11111 5789999999999999999887654
No 199
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.00 E-value=1.7e-09 Score=108.72 Aligned_cols=116 Identities=9% Similarity=-0.001 Sum_probs=89.1
Q ss_pred CCCCEEEEeecccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWP-SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p-~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
+..+||++|||+|..+..+++..+ ..+|+++|+++.+++.++++..-.. -++++++.+|+.++....+++||
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g-------~~nv~~~~~D~~~~~~~~~~~fD 189 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCG-------ISNVALTHFDGRVFGAAVPEMFD 189 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHT-------CCSEEEECCCSTTHHHHSTTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-------CCcEEEEeCCHHHhhhhccccCC
Confidence 567999999999999999998764 5899999999999999998763211 23699999999987433467899
Q ss_pred EEEEcCCCCCC-----CCCCc-------------chHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 219 GIVVDLFSEGK-----VLPQL-------------EEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 219 ~Ii~D~f~~~~-----~p~~l-------------~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
.|++|+...+. .|... ...++++.+.+.|+|||.+++...+...
T Consensus 190 ~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~ 251 (479)
T 2frx_A 190 AILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQ 251 (479)
T ss_dssp EEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSS
T ss_pred EEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCc
Confidence 99999865321 12111 1357889999999999999987655443
No 200
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.00 E-value=4.4e-10 Score=110.11 Aligned_cols=105 Identities=13% Similarity=0.021 Sum_probs=87.9
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCc-EEEEEcccccccc-cCCCc
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPS-LKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGV-LQVHIGDVFSPSE-DASGR 216 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~-~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~r-v~v~~gDa~~~l~-~~~~~ 216 (345)
+..+||++++|+|.++..+++..++ .+|++||+||..++.++++...... +.+ ++++.+|+.++++ ...++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl------~~~~v~v~~~Da~~~l~~~~~~~ 125 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNI------PEDRYEIHGMEANFFLRKEWGFG 125 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTC------CGGGEEEECSCHHHHHHSCCSSC
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCC------CCceEEEEeCCHHHHHHHhhCCC
Confidence 3578999999999999998886554 7999999999999999999875542 345 9999999999987 65678
Q ss_pred ccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 217 YAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
||+|++|.|.. ..++++.+.+.|+|||++.+.+.
T Consensus 126 fD~V~lDP~g~--------~~~~l~~a~~~Lk~gGll~~t~t 159 (392)
T 3axs_A 126 FDYVDLDPFGT--------PVPFIESVALSMKRGGILSLTAT 159 (392)
T ss_dssp EEEEEECCSSC--------CHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CcEEEECCCcC--------HHHHHHHHHHHhCCCCEEEEEec
Confidence 99999997431 14689999999999999988773
No 201
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.99 E-value=1.2e-09 Score=96.66 Aligned_cols=102 Identities=13% Similarity=0.174 Sum_probs=79.9
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccc-ccCCCcc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPS-EDASGRY 217 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l-~~~~~~y 217 (345)
.++.+||+||||+|..+..+.+. + .+++++|+++.+++.+++.+. +++.+|+.++. ...+++|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~~--------------~~~~~d~~~~~~~~~~~~f 94 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKLD--------------HVVLGDIETMDMPYEEEQF 94 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTSS--------------EEEESCTTTCCCCSCTTCE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhCC--------------cEEEcchhhcCCCCCCCcc
Confidence 46789999999999999999876 4 899999999999999988641 57888987752 2245789
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
|+|++...-. ..+ ...++++.+++.|+|||.+++.....
T Consensus 95 D~v~~~~~l~-~~~---~~~~~l~~~~~~L~~gG~l~~~~~~~ 133 (230)
T 3cc8_A 95 DCVIFGDVLE-HLF---DPWAVIEKVKPYIKQNGVILASIPNV 133 (230)
T ss_dssp EEEEEESCGG-GSS---CHHHHHHHTGGGEEEEEEEEEEEECT
T ss_pred CEEEECChhh-hcC---CHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 9999842111 111 23589999999999999999987653
No 202
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.99 E-value=8.3e-10 Score=100.62 Aligned_cols=107 Identities=9% Similarity=-0.046 Sum_probs=86.0
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+|++||||+|.++..+.+..|..+|+++|+||..++.|+++...... ..+++++.+|+.+.+. ..++||
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl------~~~I~~~~gD~l~~~~-~~~~~D 92 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGL------TSKIDVRLANGLSAFE-EADNID 92 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTC------TTTEEEEECSGGGGCC-GGGCCC
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC------CCcEEEEECchhhccc-cccccC
Confidence 456789999999999999999887778999999999999999998754332 4689999999998764 234799
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
+|++..-. . -.-.+++....++|+++|.++++-.
T Consensus 93 ~IviaGmG-----g-~lI~~IL~~~~~~l~~~~~lIlqp~ 126 (230)
T 3lec_A 93 TITICGMG-----G-RLIADILNNDIDKLQHVKTLVLQPN 126 (230)
T ss_dssp EEEEEEEC-----H-HHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred EEEEeCCc-----h-HHHHHHHHHHHHHhCcCCEEEEECC
Confidence 99863211 1 1346789999999999999988764
No 203
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.98 E-value=8.1e-10 Score=110.26 Aligned_cols=117 Identities=13% Similarity=0.002 Sum_probs=89.4
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWP-SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p-~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
.+..+||++|||+|..+..+++..+ ..+|+++|+|+..++.++++..-.. -.++.++.+|+.++....+++|
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g-------~~nv~v~~~Da~~l~~~~~~~F 176 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWG-------VSNAIVTNHAPAELVPHFSGFF 176 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT-------CSSEEEECCCHHHHHHHHTTCE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC-------CCceEEEeCCHHHhhhhccccC
Confidence 4567999999999999999887654 4799999999999999998764222 2369999999998754446889
Q ss_pred cEEEEcCCCCCC-CCCC-----------------cchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 218 AGIVVDLFSEGK-VLPQ-----------------LEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 218 D~Ii~D~f~~~~-~p~~-----------------l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
|+|++|+...+. .... -...++++.+.+.|+|||.++....+...
T Consensus 177 D~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~ 239 (456)
T 3m4x_A 177 DRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAP 239 (456)
T ss_dssp EEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCG
T ss_pred CEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccc
Confidence 999999865321 1100 01237899999999999999987665554
No 204
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.98 E-value=2.3e-10 Score=104.15 Aligned_cols=118 Identities=12% Similarity=-0.001 Sum_probs=81.7
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCC-------------CCCC---------CCC
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLE-------------KPTA---------TGG 197 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~-------------~~~~---------~~~ 197 (345)
++.+||+||||+|.++..+.+..+ .+|+++|+++.+++.|++.+...... +... ...
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 457899999999999988776533 59999999999999999987522100 0000 001
Q ss_pred cE-EEEEcccccccccCC---CcccEEEEcCCCCCCCCCCc-chHHHHHHHHhccCCCcEEEEEecC
Q 038076 198 VL-QVHIGDVFSPSEDAS---GRYAGIVVDLFSEGKVLPQL-EEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 198 rv-~v~~gDa~~~l~~~~---~~yD~Ii~D~f~~~~~p~~l-~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
++ +++.+|+.+.....+ ++||+|++...-. .++++. .-..+++++++.|+|||.+++....
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~-~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLD-AACPDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHH-HHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhh-hhcCChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 27 899999988643233 7899999743211 112221 2357899999999999999887643
No 205
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.98 E-value=6.2e-10 Score=105.27 Aligned_cols=118 Identities=8% Similarity=-0.031 Sum_probs=75.7
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc-----cc--c
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP-----SE--D 212 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~-----l~--~ 212 (345)
+..+||+||||+|.....+++. ...+|+++|+++.+++.|+++..-.... ......+++++++|...- +. .
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~-~~~~v~GiD~S~~~l~~A~~~~~~~~~~-~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG-EIALLVATDPDADAIARGNERYNKLNSG-IKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHCC-----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhc-CCCeEEEEECCHHHHHHHHHHHHhcccc-ccccccccchhhhhcccchhhhhhhccc
Confidence 3578999999999755444442 4579999999999999999876311100 000001366778877211 11 1
Q ss_pred CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCC
Q 038076 213 ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 213 ~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
.+++||+|++-..- .+.........+++++++.|+|||.+++...+.
T Consensus 126 ~~~~FD~V~~~~~l-hy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~ 172 (302)
T 2vdw_A 126 YFGKFNIIDWQFAI-HYSFHPRHYATVMNNLSELTASGGKVLITTMDG 172 (302)
T ss_dssp CSSCEEEEEEESCG-GGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred cCCCeeEEEECchH-HHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 35789999874211 111111123689999999999999999877643
No 206
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.97 E-value=7.3e-10 Score=102.98 Aligned_cols=148 Identities=11% Similarity=-0.036 Sum_probs=97.0
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEE--EcccccccccCCCc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVH--IGDVFSPSEDASGR 216 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~--~gDa~~~l~~~~~~ 216 (345)
.+..+||+||||+|..+..+.+. .+|++||++| +...+++. ..+. ...+.++.++ .+|+.++ .+++
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~-~~~~----~~~~~~v~~~~~~~D~~~l---~~~~ 140 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEV-PRIT----ESYGWNIVKFKSRVDIHTL---PVER 140 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCC-CCCC----CBTTGGGEEEECSCCTTTS---CCCC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhh-hhhh----hccCCCeEEEecccCHhHC---CCCC
Confidence 45679999999999999988875 6899999999 43322221 1110 0112268888 8999885 3678
Q ss_pred ccEEEEcCCCCCCCCCCcc----hHHHHHHHHhccCCCc--EEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHH
Q 038076 217 YAGIVVDLFSEGKVLPQLE----EVATWLKLKDRLMPNG--RFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALS 290 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~l~----t~ef~~~~~~~L~pgG--vlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~ 290 (345)
||+|++|.. . ..+.+.. +.++++.+.+.|+||| .+++.+..+.. ......+..++
T Consensus 141 fD~V~sd~~-~-~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~~-----------------~~~~~~l~~l~ 201 (265)
T 2oxt_A 141 TDVIMCDVG-E-SSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPYS-----------------VEVMERLSVMQ 201 (265)
T ss_dssp CSEEEECCC-C-CCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTTS-----------------HHHHHHHHHHH
T ss_pred CcEEEEeCc-c-cCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCCC-----------------hhHHHHHHHHH
Confidence 999999865 2 1111111 2237888999999999 99998876332 22446778889
Q ss_pred HHCCCCEEEEEecCC--CCceEEEEeCCCCC
Q 038076 291 EAFPGKVSWKRMPER--NGENFLALTGLLPD 319 (345)
Q Consensus 291 ~~F~~~v~~~~~~~~--~~~n~v~~a~~~p~ 319 (345)
+.|. .+.+.+ +.. ...-.++++....+
T Consensus 202 ~~f~-~v~~~k-~~sR~~s~E~y~v~~~~~~ 230 (265)
T 2oxt_A 202 RKWG-GGLVRN-PYSRNSTHEMYFTSRAGGN 230 (265)
T ss_dssp HHHC-CEEECC-TTSCTTCCCEEEESSCCSC
T ss_pred HHcC-CEEEEE-ecccCCCccEEEEecCCCC
Confidence 9998 565554 431 22334555554443
No 207
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.97 E-value=3.2e-09 Score=105.66 Aligned_cols=117 Identities=11% Similarity=0.156 Sum_probs=89.4
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc-CCCc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPS-LKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED-ASGR 216 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~-~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~-~~~~ 216 (345)
.+..+||++|||+|..+..+.+..++ .+|+++|+++..++.+++++.-.. -++++++.+|+.++... .+++
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g-------~~~v~~~~~D~~~~~~~~~~~~ 330 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMG-------IKIVKPLVKDARKAPEIIGEEV 330 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTT-------CCSEEEECSCTTCCSSSSCSSC
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcC-------CCcEEEEEcChhhcchhhccCC
Confidence 45678999999999999999988776 899999999999999998864221 24699999999887432 2368
Q ss_pred ccEEEEcCCCCCC-C----CCC--------c-----chHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 217 YAGIVVDLFSEGK-V----LPQ--------L-----EEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 217 yD~Ii~D~f~~~~-~----p~~--------l-----~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
||+|++|+...+. . |.. + ...++++.+.+.|+|||.+++...+...
T Consensus 331 fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~ 394 (450)
T 2yxl_A 331 ADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFK 394 (450)
T ss_dssp EEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG
T ss_pred CCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCCh
Confidence 9999999865432 1 110 0 1257899999999999999987665543
No 208
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.97 E-value=1.3e-09 Score=100.05 Aligned_cols=101 Identities=12% Similarity=0.061 Sum_probs=78.9
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|..+..+.+ ++.+|+++|++|.+++.|++. ++++++++|+.++ ...+++||
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~-------------~~~~~~~~d~~~~-~~~~~~fD 96 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVH-------------PQVEWFTGYAENL-ALPDKSVD 96 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCC-------------TTEEEECCCTTSC-CSCTTCBS
T ss_pred CCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhc-------------cCCEEEECchhhC-CCCCCCEe
Confidence 5678999999999999999986 678999999999999977553 2689999999874 34568999
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
+|++...-. .++ ...++++++++.|+ ||.+++..+..
T Consensus 97 ~v~~~~~l~-~~~---~~~~~l~~~~~~Lk-gG~~~~~~~~~ 133 (261)
T 3ege_A 97 GVISILAIH-HFS---HLEKSFQEMQRIIR-DGTIVLLTFDI 133 (261)
T ss_dssp EEEEESCGG-GCS---SHHHHHHHHHHHBC-SSCEEEEEECG
T ss_pred EEEEcchHh-hcc---CHHHHHHHHHHHhC-CcEEEEEEcCC
Confidence 999853221 111 23689999999999 99766655543
No 209
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.97 E-value=1.1e-09 Score=100.66 Aligned_cols=107 Identities=12% Similarity=0.008 Sum_probs=85.3
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+||+||||+|.++..+.+..|..+|+++|+||..++.|+++...... ..+++++.+|+.+.+.. .++||
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl------~~~I~v~~gD~l~~~~~-~~~~D 92 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGL------TEQIDVRKGNGLAVIEK-KDAID 92 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC------TTTEEEEECSGGGGCCG-GGCCC
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC------CceEEEEecchhhccCc-ccccc
Confidence 456799999999999999999887778999999999999999998754332 45899999999987642 33699
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
+|++-.-. . -.-.+++....++|+++|.++++-.
T Consensus 93 ~IviagmG-----g-~lI~~IL~~~~~~L~~~~~lIlq~~ 126 (244)
T 3gnl_A 93 TIVIAGMG-----G-TLIRTILEEGAAKLAGVTKLILQPN 126 (244)
T ss_dssp EEEEEEEC-----H-HHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred EEEEeCCc-----h-HHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 99872111 1 1346789999999999999988754
No 210
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.96 E-value=3.5e-09 Score=101.72 Aligned_cols=107 Identities=14% Similarity=0.068 Sum_probs=82.0
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|..+..+.+.+|+.+++++|+ |.+++.|++.+.... ..+|++++.+|+.+. ....+|
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~------~~~~v~~~~~d~~~~---~~~~~D 258 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKG------VADRMRGIAVDIYKE---SYPEAD 258 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT------CTTTEEEEECCTTTS---CCCCCS
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcC------CCCCEEEEeCccccC---CCCCCC
Confidence 4568999999999999999999999999999999 999999998874222 135799999999875 223349
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEe
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
+|++...-. ..+. -...++++++++.|+|||.+++.-
T Consensus 259 ~v~~~~vlh-~~~d-~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 259 AVLFCRILY-SANE-QLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp EEEEESCGG-GSCH-HHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred EEEEechhc-cCCH-HHHHHHHHHHHHhcCCCCEEEEEe
Confidence 999842211 1111 123678999999999999986654
No 211
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.96 E-value=8.5e-10 Score=102.96 Aligned_cols=113 Identities=14% Similarity=0.029 Sum_probs=75.4
Q ss_pred CCCCEEEEeecccHHHHH----HHHhCCCCEE--EEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccc--
Q 038076 140 PNGPIAIYGLGGGTAAHL----MLDLWPSLKL--EGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSE-- 211 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~----l~~~~p~~~v--~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~-- 211 (345)
++.+||+||||+|.++.. +...+|+.+| ++||++++|++.|++...-... ...-++++..+|+.++..
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~ 127 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSN----LENVKFAWHKETSSEYQSRM 127 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSS----CTTEEEEEECSCHHHHHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccC----CCcceEEEEecchhhhhhhh
Confidence 456899999999976543 3444577755 9999999999999988632110 001234455666655431
Q ss_pred ---cCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCC
Q 038076 212 ---DASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 212 ---~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
..+++||+|++-.--. .++ .-..+++++++.|+|||.+++.....
T Consensus 128 ~~~~~~~~fD~V~~~~~l~-~~~---d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 128 LEKKELQKWDFIHMIQMLY-YVK---DIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp HTTTCCCCEEEEEEESCGG-GCS---CHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred ccccCCCceeEEEEeeeee-ecC---CHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 1367899999732111 122 13568999999999999998875543
No 212
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.96 E-value=2.1e-09 Score=105.60 Aligned_cols=106 Identities=15% Similarity=0.105 Sum_probs=79.6
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh----------cCCCCCCCCCCCCCcEEEEEcccc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDY----------FGLSDLEKPTATGGVLQVHIGDVF 207 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~----------f~~~~~~~~~~~~~rv~v~~gDa~ 207 (345)
+.+..+||+||||+|.++..+....+..++++||++|.++++|++. +++. .++++++.+|+.
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~--------~~rVefi~GD~~ 242 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK--------HAEYTLERGDFL 242 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC--------CCEEEEEECCTT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC--------CCCeEEEECccc
Confidence 3567889999999999999998777766799999999999999863 2321 358999999998
Q ss_pred cccccC-CCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 208 SPSEDA-SGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 208 ~~l~~~-~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
+.--.. -..+|+|++..+- .. -...+.+.++.+.|+|||.+++.
T Consensus 243 ~lp~~d~~~~aDVVf~Nn~~---F~--pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 243 SEEWRERIANTSVIFVNNFA---FG--PEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp SHHHHHHHHTCSEEEECCTT---CC--HHHHHHHHHHHTTSCTTCEEEES
T ss_pred CCccccccCCccEEEEcccc---cC--chHHHHHHHHHHcCCCCcEEEEe
Confidence 742111 1479999985321 11 12345678889999999999874
No 213
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.96 E-value=1.2e-09 Score=103.37 Aligned_cols=111 Identities=12% Similarity=0.080 Sum_probs=83.5
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||++|||+|..+..+.+.+|+.+++++|++ .+++.|++.+...+. .++++++.+|..+. ..++.||
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~------~~~v~~~~~d~~~~--~~~~~~D 234 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGV------ASRYHTIAGSAFEV--DYGNDYD 234 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTC------GGGEEEEESCTTTS--CCCSCEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCC------CcceEEEecccccC--CCCCCCc
Confidence 45689999999999999999999999999999999 999999988642211 35799999999874 2234599
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
+|++-..-. ..+. -...++++++++.|+|||.+++.-...
T Consensus 235 ~v~~~~~l~-~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 235 LVLLPNFLH-HFDV-ATCEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp EEEEESCGG-GSCH-HHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred EEEEcchhc-cCCH-HHHHHHHHHHHHhCCCCcEEEEEeecC
Confidence 999832111 1110 123588999999999999877654443
No 214
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.95 E-value=4.3e-10 Score=99.64 Aligned_cols=103 Identities=13% Similarity=0.053 Sum_probs=76.0
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||.|.++..+....|+.+++++|+|+.+++++++++...+. ..++++ .|...- ..+++||
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~------~~~v~~--~d~~~~--~~~~~~D 117 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKT------TIKYRF--LNKESD--VYKGTYD 117 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCC------SSEEEE--ECCHHH--HTTSEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCC------CccEEE--eccccc--CCCCCcC
Confidence 568999999999999999998888999999999999999999999853321 124444 666553 3678899
Q ss_pred EEEEcCCCCCCCCCCcchH--HHHHHHHhccCCCcEEEEEec
Q 038076 219 GIVVDLFSEGKVLPQLEEV--ATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~--ef~~~~~~~L~pgGvlvvn~~ 258 (345)
+|+.- .+ -|+... ..+..+.+.|+|||+++ ++.
T Consensus 118 vVLa~-----k~-LHlL~~~~~al~~v~~~L~pggvfI-Sfp 152 (200)
T 3fzg_A 118 VVFLL-----KM-LPVLKQQDVNILDFLQLFHTQNFVI-SFP 152 (200)
T ss_dssp EEEEE-----TC-HHHHHHTTCCHHHHHHTCEEEEEEE-EEE
T ss_pred hhhHh-----hH-HHhhhhhHHHHHHHHHHhCCCCEEE-EeC
Confidence 99862 11 111111 23448999999999986 444
No 215
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.95 E-value=1.9e-09 Score=106.87 Aligned_cols=109 Identities=12% Similarity=-0.004 Sum_probs=79.7
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHH-------HHhcCCCCCCCCCCCCCcEEEEEcccccc-
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKV-------RDYFGLSDLEKPTATGGVLQVHIGDVFSP- 209 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A-------~~~f~~~~~~~~~~~~~rv~v~~gDa~~~- 209 (345)
..+..+||+||||+|.++..+++..+..+|++||+++.+++.| ++.+..... .-.+++++++|+..-
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl-----~~~nV~~i~gD~~~~~ 314 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGM-----RLNNVEFSLKKSFVDN 314 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTB-----CCCCEEEEESSCSTTC
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCC-----CCCceEEEEcCccccc
Confidence 3466899999999999999999877767999999999999999 776532110 025799999876531
Q ss_pred --cccCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 210 --SEDASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 210 --l~~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
+....++||+|++..+.. .+ .-.+.++++.+.|+|||.+++.
T Consensus 315 ~~~~~~~~~FDvIvvn~~l~---~~--d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 315 NRVAELIPQCDVILVNNFLF---DE--DLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp HHHHHHGGGCSEEEECCTTC---CH--HHHHHHHHHHTTCCTTCEEEES
T ss_pred cccccccCCCCEEEEeCccc---cc--cHHHHHHHHHHhCCCCeEEEEe
Confidence 111246899999853221 11 2245788999999999998874
No 216
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.95 E-value=3.1e-09 Score=94.97 Aligned_cols=103 Identities=15% Similarity=0.119 Sum_probs=77.0
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc---------
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP--------- 209 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~--------- 209 (345)
.++++||++|+| ..+.++.+. ++.+|+.||.|++..+.|+++|...+. ....+++++++|+.+.
T Consensus 29 ~~a~~VLEiGtG--ySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~g~----~~~~~I~~~~gda~~~~~wg~p~~~ 101 (202)
T 3cvo_A 29 EEAEVILEYGSG--GSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAANPP----AEGTEVNIVWTDIGPTGDWGHPVSD 101 (202)
T ss_dssp HHCSEEEEESCS--HHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHSCC----CTTCEEEEEECCCSSBCGGGCBSSS
T ss_pred hCCCEEEEECch--HHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHcCC----CCCCceEEEEeCchhhhcccccccc
Confidence 467899999985 566666663 479999999999999999999953321 0035899999997653
Q ss_pred -----cc-------c--CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE-Ee
Q 038076 210 -----SE-------D--ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV-NC 257 (345)
Q Consensus 210 -----l~-------~--~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv-n~ 257 (345)
+. . ..++||+||+|+.. ..+++..+.++|+|||++++ |+
T Consensus 102 ~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k---------~~~~~~~~l~~l~~GG~Iv~DNv 155 (202)
T 3cvo_A 102 AKWRSYPDYPLAVWRTEGFRHPDVVLVDGRF---------RVGCALATAFSITRPVTLLFDDY 155 (202)
T ss_dssp TTGGGTTHHHHGGGGCTTCCCCSEEEECSSS---------HHHHHHHHHHHCSSCEEEEETTG
T ss_pred hhhhhHHHHhhhhhccccCCCCCEEEEeCCC---------chhHHHHHHHhcCCCeEEEEeCC
Confidence 11 1 23789999999732 23677778899999999987 54
No 217
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.95 E-value=6e-09 Score=102.99 Aligned_cols=116 Identities=17% Similarity=0.130 Sum_probs=88.9
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc-CCCcc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED-ASGRY 217 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~-~~~~y 217 (345)
.+..+||++|||+|..+..+.+..++.+|+++|+++..++.+++.+... +-+++++.+|+.++... .+++|
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~--------g~~~~~~~~D~~~~~~~~~~~~f 316 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL--------GMKATVKQGDGRYPSQWCGEQQF 316 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHT--------TCCCEEEECCTTCTHHHHTTCCE
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHc--------CCCeEEEeCchhhchhhcccCCC
Confidence 3567999999999999999999887789999999999999999887422 12478999999886431 34789
Q ss_pred cEEEEcCCCCC-CC----CCCc-------------chHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 218 AGIVVDLFSEG-KV----LPQL-------------EEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 218 D~Ii~D~f~~~-~~----p~~l-------------~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
|+|++|++..+ +. |... ...++++.+.+.|+|||.+++...+...
T Consensus 317 D~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~ 379 (429)
T 1sqg_A 317 DRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLP 379 (429)
T ss_dssp EEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCG
T ss_pred CEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCh
Confidence 99999986543 11 1100 1147899999999999999987655443
No 218
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.94 E-value=1.7e-09 Score=103.60 Aligned_cols=109 Identities=18% Similarity=0.231 Sum_probs=83.2
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+||+||||+|..+..+.+.+|+.+++++|+ |.+++.|++++.... ..++++++.+|..+.+ +..||
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~------~~~~v~~~~~d~~~~~---~~~~D 251 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEG------LSDRVDVVEGDFFEPL---PRKAD 251 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTT------CTTTEEEEECCTTSCC---SSCEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcC------CCCceEEEeCCCCCCC---CCCcc
Confidence 3567999999999999999999999999999999 999999998874222 1358999999998743 33599
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+|++...-. ..+. -...++++++++.|+|||.+++.-..
T Consensus 252 ~v~~~~vl~-~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 252 AIILSFVLL-NWPD-HDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEEESCGG-GSCH-HHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEEccccc-CCCH-HHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 999743221 1111 11247999999999999988876543
No 219
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.94 E-value=1e-09 Score=104.22 Aligned_cols=105 Identities=14% Similarity=0.103 Sum_probs=82.1
Q ss_pred CCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccEEE
Q 038076 142 GPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAGIV 221 (345)
Q Consensus 142 ~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~Ii 221 (345)
.+||+||||+|..+..+.+.+|+.+++++|+ |.+++.|++.+.... ..++++++.+|..+. .+++||+|+
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~------~~~~v~~~~~d~~~~---~~~~~D~v~ 238 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLL------AGERVSLVGGDMLQE---VPSNGDIYL 238 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHH------HTTSEEEEESCTTTC---CCSSCSEEE
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcC------CCCcEEEecCCCCCC---CCCCCCEEE
Confidence 8999999999999999999999999999999 999999998863211 136899999999873 346799999
Q ss_pred EcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 222 VDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 222 ~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
+...-+. .+ .-...++++++++.|+|||.+++.-.
T Consensus 239 ~~~vl~~-~~-~~~~~~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 239 LSRIIGD-LD-EAASLRLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp EESCGGG-CC-HHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred EchhccC-CC-HHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 7432211 11 11224789999999999999887644
No 220
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.93 E-value=1.1e-09 Score=110.13 Aligned_cols=107 Identities=16% Similarity=0.162 Sum_probs=79.7
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++++||+||||+|.++..+++ .+..+|++||+++ +++.|++......+ .++++++.+|+.++- .+++||
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~-~l~~A~~~~~~~gl------~~~v~~~~~d~~~~~--~~~~fD 226 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEAST-MAQHAEVLVKSNNL------TDRIVVIPGKVEEVS--LPEQVD 226 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHH-HHHHHHHHHHHTTC------TTTEEEEESCTTTCC--CSSCEE
T ss_pred cCCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHH-HHHHHHHHHHHcCC------CCcEEEEECchhhCc--cCCCeE
Confidence 4568999999999999998887 4678999999999 88999987643221 368999999998852 346899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEe
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
+|+++... +....-...+.+..+++.|+|||.+++..
T Consensus 227 ~Ivs~~~~--~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 227 IIISEPMG--YMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp EEECCCCH--HHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred EEEEeCch--HhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 99985321 10011122456778899999999998543
No 221
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.93 E-value=2.2e-09 Score=98.49 Aligned_cols=114 Identities=17% Similarity=0.115 Sum_probs=81.9
Q ss_pred CCCCCEEEEeecccHHHHHHHHhC-CCCEEEEEECCHH------HHHHHHHhcCCCCCCCCCCCCCcEEEEEcc-cccc-
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLW-PSLKLEGWEIDEI------LIDKVRDYFGLSDLEKPTATGGVLQVHIGD-VFSP- 209 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~-p~~~v~~VEidp~------vi~~A~~~f~~~~~~~~~~~~~rv~v~~gD-a~~~- 209 (345)
.++.+||+||||+|..+..+.+.. |..+++++|+++. +++.|++++.... ..++++++.+| ....
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~------~~~~v~~~~~d~~~~~~ 115 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP------LGDRLTVHFNTNLSDDL 115 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST------TGGGEEEECSCCTTTCC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC------CCCceEEEECChhhhcc
Confidence 466899999999999999999875 6689999999997 9999999875322 13689999998 2211
Q ss_pred cccCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 210 SEDASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 210 l~~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
+...+++||+|++...-. ..+. ...+++.+++.++|||.+++..+....
T Consensus 116 ~~~~~~~fD~v~~~~~l~-~~~~---~~~~~~~~~~l~~~gG~l~~~~~~~~~ 164 (275)
T 3bkx_A 116 GPIADQHFDRVVLAHSLW-YFAS---ANALALLFKNMAAVCDHVDVAEWSMQP 164 (275)
T ss_dssp GGGTTCCCSEEEEESCGG-GSSC---HHHHHHHHHHHTTTCSEEEEEEECSSC
T ss_pred CCCCCCCEEEEEEccchh-hCCC---HHHHHHHHHHHhCCCCEEEEEEecCCC
Confidence 122457899999753221 1221 134666677777779999987765543
No 222
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.93 E-value=7.9e-10 Score=103.40 Aligned_cols=146 Identities=12% Similarity=-0.009 Sum_probs=96.0
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEE--EcccccccccCCCc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVH--IGDVFSPSEDASGR 216 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~--~gDa~~~l~~~~~~ 216 (345)
.+..+||+||||+|..+..+++. .+|++||++| +...+++.. ... ...+.+++++ .+|+.++ .+++
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~-~~~----~~~~~~v~~~~~~~D~~~l---~~~~ 148 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKP-RLV----ETFGWNLITFKSKVDVTKM---EPFQ 148 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCC-CCC----CCTTGGGEEEECSCCGGGC---CCCC
T ss_pred CCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhch-hhh----hhcCCCeEEEeccCcHhhC---CCCC
Confidence 45679999999999999998875 6899999999 533332211 110 0012378899 8999885 3678
Q ss_pred ccEEEEcCCCCCCCCCCcc----hHHHHHHHHhccCCCc--EEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHH
Q 038076 217 YAGIVVDLFSEGKVLPQLE----EVATWLKLKDRLMPNG--RFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALS 290 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~l~----t~ef~~~~~~~L~pgG--vlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~ 290 (345)
||+|++|.. . ..+.+.. +.++++.+.+.|+||| .+++.+..+.. ......++.++
T Consensus 149 fD~Vvsd~~-~-~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~~~-----------------~~~~~~l~~l~ 209 (276)
T 2wa2_A 149 ADTVLCDIG-E-SNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNPYS-----------------CDVLEALMKMQ 209 (276)
T ss_dssp CSEEEECCC-C-CCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCCCS-----------------HHHHHHHHHHH
T ss_pred cCEEEECCC-c-CCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCCCc-----------------hhHHHHHHHHH
Confidence 999999865 2 1111111 2237888999999999 99988776332 22446677888
Q ss_pred HHCCCCEEEEEecC---CCCceEEEEeCCCC
Q 038076 291 EAFPGKVSWKRMPE---RNGENFLALTGLLP 318 (345)
Q Consensus 291 ~~F~~~v~~~~~~~---~~~~n~v~~a~~~p 318 (345)
+.|. .+.++ |. .....++++.....
T Consensus 210 ~~f~-~v~v~--P~~sR~~s~E~y~v~~~~~ 237 (276)
T 2wa2_A 210 ARFG-GGLIR--VPLSRNSTHEMYFVSGIKN 237 (276)
T ss_dssp HHHC-CEEEC--CTTSCTTCCCEEEESSCCC
T ss_pred HHcC-CEEEE--cCCCCCcchheEEecccCC
Confidence 8998 56654 42 12234455555443
No 223
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.92 E-value=1.4e-09 Score=106.45 Aligned_cols=97 Identities=14% Similarity=0.210 Sum_probs=73.7
Q ss_pred CCCCCEEEEeec-------ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc--
Q 038076 139 VPNGPIAIYGLG-------GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP-- 209 (345)
Q Consensus 139 ~~p~~VLiIG~G-------~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~-- 209 (345)
.++.+||+|||| +|.....+.+++|+.+|++||++|.+. .. .++++++++|+.+.
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~~----------~~rI~fv~GDa~dlpf 278 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------VD----------ELRIRTIQGDQNDAEF 278 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------GC----------BTTEEEEECCTTCHHH
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------hc----------CCCcEEEEecccccch
Confidence 467899999999 566666666667999999999999972 11 46899999999873
Q ss_pred cc---cCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 210 SE---DASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 210 l~---~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
+. ...++||+|++|... .. -....+|+++++.|||||++++.
T Consensus 279 ~~~l~~~d~sFDlVisdgsH--~~---~d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 279 LDRIARRYGPFDIVIDDGSH--IN---AHVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp HHHHHHHHCCEEEEEECSCC--CH---HHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hhhhhcccCCccEEEECCcc--cc---hhHHHHHHHHHHhcCCCeEEEEE
Confidence 21 114789999987532 11 12357899999999999999985
No 224
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.91 E-value=1.3e-09 Score=103.42 Aligned_cols=129 Identities=15% Similarity=0.094 Sum_probs=88.4
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEEC----CHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEc-cccccccc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEI----DEILIDKVRDYFGLSDLEKPTATGGVLQVHIG-DVFSPSED 212 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEi----dp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~g-Da~~~l~~ 212 (345)
+.+..+||+||||+|..+..+++. .+|++||+ ++..++.+ .... ...++++++.+ |+..+
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~----~~~~-----~~~~~v~~~~~~D~~~l--- 144 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPI----PMST-----YGWNLVRLQSGVDVFFI--- 144 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCC----CCCS-----TTGGGEEEECSCCTTTS---
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHH----Hhhh-----cCCCCeEEEeccccccC---
Confidence 345679999999999999998875 47999999 45333211 1111 11367999999 98875
Q ss_pred CCCcccEEEEcCCCCCCC--CCCcchHHHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHH
Q 038076 213 ASGRYAGIVVDLFSEGKV--LPQLEEVATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALS 290 (345)
Q Consensus 213 ~~~~yD~Ii~D~f~~~~~--p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~ 290 (345)
..++||+|++|....... ..+..+..++..+.+.|+|||.+++.+..... .....++..++
T Consensus 145 ~~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~~~-----------------~~~~~~l~~l~ 207 (305)
T 2p41_A 145 PPERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNPYM-----------------SSVIEKMEALQ 207 (305)
T ss_dssp CCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCCCS-----------------HHHHHHHHHHH
T ss_pred CcCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCCCC-----------------chHHHHHHHHH
Confidence 357899999986432110 01111224788899999999999998876543 23467778888
Q ss_pred HHCCCCEEE
Q 038076 291 EAFPGKVSW 299 (345)
Q Consensus 291 ~~F~~~v~~ 299 (345)
+.|. .+.+
T Consensus 208 ~~f~-~v~~ 215 (305)
T 2p41_A 208 RKHG-GALV 215 (305)
T ss_dssp HHHC-CEEE
T ss_pred HHcC-CEEE
Confidence 8998 4553
No 225
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.91 E-value=1.2e-08 Score=89.69 Aligned_cols=100 Identities=19% Similarity=0.176 Sum_probs=77.2
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
++.+||++|||+|.++..+.+. +..+++++|+||.+++.|++.+... +-+++++.+|+.++ +.+||+
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~--------~~~~~~~~~d~~~~----~~~~D~ 115 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLL-GAKEVICVEVDKEAVDVLIENLGEF--------KGKFKVFIGDVSEF----NSRVDI 115 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHTGGG--------TTSEEEEESCGGGC----CCCCSE
T ss_pred CcCEEEEeeCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHc--------CCCEEEEECchHHc----CCCCCE
Confidence 5678999999999999998875 3458999999999999999987532 12799999999885 358999
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
|++|..-... ..-...++++.+.+.| ||++++.
T Consensus 116 v~~~~p~~~~--~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 116 VIMNPPFGSQ--RKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp EEECCCCSSS--STTTTHHHHHHHHHHC--SEEEEEE
T ss_pred EEEcCCCccc--cCCchHHHHHHHHHhc--CcEEEEE
Confidence 9998643211 1123467889998888 6666544
No 226
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.89 E-value=6.7e-09 Score=96.95 Aligned_cols=115 Identities=13% Similarity=0.112 Sum_probs=80.8
Q ss_pred CCCCEEEEeecc---cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc---cccC
Q 038076 140 PNGPIAIYGLGG---GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP---SEDA 213 (345)
Q Consensus 140 ~p~~VLiIG~G~---G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~---l~~~ 213 (345)
..+++|+||||. |.+...+.+..|+.+|++||+||.|++.||+.+.-.. ..+++++++|.++. +...
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-------~~~~~~v~aD~~~~~~~l~~~ 150 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-------EGRTAYVEADMLDPASILDAP 150 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-------SSEEEEEECCTTCHHHHHTCH
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-------CCcEEEEEecccChhhhhccc
Confidence 347899999995 4454444556899999999999999999999885221 35799999999985 1111
Q ss_pred --CCccc-----EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 214 --SGRYA-----GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 214 --~~~yD-----~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
.+.|| .|++...-+ .++.+-.-.+.++.+++.|+|||.|++.....+.
T Consensus 151 ~~~~~~D~~~p~av~~~avLH-~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~ 205 (277)
T 3giw_A 151 ELRDTLDLTRPVALTVIAIVH-FVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEF 205 (277)
T ss_dssp HHHTTCCTTSCCEEEEESCGG-GSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTT
T ss_pred ccccccCcCCcchHHhhhhHh-cCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCC
Confidence 24455 354432211 2333212257899999999999999998776653
No 227
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.88 E-value=1.2e-08 Score=98.17 Aligned_cols=105 Identities=15% Similarity=0.184 Sum_probs=81.7
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
+.++|++||||.|..+..+++.+|+.++++.|+ |.|++.|+++..... .+|++++.+|..+ .....+|+
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~-------~~rv~~~~gD~~~---~~~~~~D~ 247 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE-------EEQIDFQEGDFFK---DPLPEADL 247 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---------CCSEEEEESCTTT---SCCCCCSE
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc-------cCceeeecCcccc---CCCCCceE
Confidence 457899999999999999999999999999998 999999999886432 5799999999865 24567899
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEe
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
|++--.-+. .++ -...+.++++++.|+|||.+++.=
T Consensus 248 ~~~~~vlh~-~~d-~~~~~iL~~~~~al~pgg~lli~e 283 (353)
T 4a6d_A 248 YILARVLHD-WAD-GKCSHLLERIYHTCKPGGGILVIE 283 (353)
T ss_dssp EEEESSGGG-SCH-HHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEeeeeccc-CCH-HHHHHHHHHHHhhCCCCCEEEEEE
Confidence 987321111 111 123578999999999999877653
No 228
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.87 E-value=9e-09 Score=90.22 Aligned_cols=94 Identities=17% Similarity=0.119 Sum_probs=71.9
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
++.+||++|||+|.++..+.+. +..+|++||+||.+++.|++++. +++++.+|+.++ +++||+
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~------------~~~~~~~d~~~~----~~~~D~ 113 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG------------GVNFMVADVSEI----SGKYDT 113 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT------------TSEEEECCGGGC----CCCEEE
T ss_pred CCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC------------CCEEEECcHHHC----CCCeeE
Confidence 5679999999999999998875 55689999999999999999863 488999999885 378999
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEE
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFM 254 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlv 254 (345)
|++|..-... ..-...++++.+.+.| |++++
T Consensus 114 v~~~~p~~~~--~~~~~~~~l~~~~~~~--g~~~~ 144 (200)
T 1ne2_A 114 WIMNPPFGSV--VKHSDRAFIDKAFETS--MWIYS 144 (200)
T ss_dssp EEECCCC---------CHHHHHHHHHHE--EEEEE
T ss_pred EEECCCchhc--cCchhHHHHHHHHHhc--CcEEE
Confidence 9997533211 1112357899998888 44443
No 229
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.87 E-value=1.5e-08 Score=94.44 Aligned_cols=113 Identities=13% Similarity=0.092 Sum_probs=77.4
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEEC-CHHHHHHHHHhcCC-----CCCCCCCCCCCcEEEEEccccccccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEI-DEILIDKVRDYFGL-----SDLEKPTATGGVLQVHIGDVFSPSED 212 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEi-dp~vi~~A~~~f~~-----~~~~~~~~~~~rv~v~~gDa~~~l~~ 212 (345)
.+.++||+||||+|.++..+.+. +..+|+++|+ +|.+++.|+++... .... ....++++++..|..+....
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~--~~~~~~v~~~~~~~~~~~~~ 154 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREHTANSCSSE--TVKRASPKVVPYRWGDSPDS 154 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTTCC------------CCCEEEECCTTSCTHH
T ss_pred cCCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccc--cCCCCCeEEEEecCCCccHH
Confidence 45679999999999999988874 4459999999 99999999998722 1100 00014688885553332111
Q ss_pred -----CCCcccEEEE-cCCCCCCCCCCcchHHHHHHHHhccC---C--CcEEEEEecC
Q 038076 213 -----ASGRYAGIVV-DLFSEGKVLPQLEEVATWLKLKDRLM---P--NGRFMVNCGG 259 (345)
Q Consensus 213 -----~~~~yD~Ii~-D~f~~~~~p~~l~t~ef~~~~~~~L~---p--gGvlvvn~~~ 259 (345)
..++||+|++ |+.... -....+++.+++.|+ | ||++++-+..
T Consensus 155 ~~~~~~~~~fD~Ii~~dvl~~~-----~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~ 207 (281)
T 3bzb_A 155 LQRCTGLQRFQVVLLADLLSFH-----QAHDALLRSVKMLLALPANDPTAVALVTFTH 207 (281)
T ss_dssp HHHHHSCSSBSEEEEESCCSCG-----GGHHHHHHHHHHHBCCTTTCTTCEEEEEECC
T ss_pred HHhhccCCCCCEEEEeCcccCh-----HHHHHHHHHHHHHhcccCCCCCCEEEEEEEe
Confidence 3578999987 653321 124678999999999 9 9987765443
No 230
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.86 E-value=6.9e-09 Score=99.40 Aligned_cols=106 Identities=17% Similarity=0.130 Sum_probs=77.6
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+||+||||+|..+..+++.+|+.+++++|+ |.+++ ++..... ...+|++++.+|..+.+ + +||
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~------~~~~~v~~~~~d~~~~~---p-~~D 249 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAP------DVAGRWKVVEGDFLREV---P-HAD 249 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCG------GGTTSEEEEECCTTTCC---C-CCS
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--ccccccc------CCCCCeEEEecCCCCCC---C-CCc
Confidence 3567999999999999999999999999999999 66665 3333211 12578999999997432 3 899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+|++-..-+ ..+ .....++++++++.|+|||.+++.-..
T Consensus 250 ~v~~~~vlh-~~~-d~~~~~~L~~~~~~LkpgG~l~i~e~~ 288 (348)
T 3lst_A 250 VHVLKRILH-NWG-DEDSVRILTNCRRVMPAHGRVLVIDAV 288 (348)
T ss_dssp EEEEESCGG-GSC-HHHHHHHHHHHHHTCCTTCEEEEEECC
T ss_pred EEEEehhcc-CCC-HHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 999742111 111 112257999999999999999876443
No 231
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.85 E-value=9.1e-09 Score=99.91 Aligned_cols=103 Identities=14% Similarity=-0.053 Sum_probs=77.7
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
..+..+||++|||+|+++..+....+..+|+++|+|+.+++.|+++...... +++++++.+|+.+.. ...++|
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl------~~~i~~~~~D~~~~~-~~~~~f 287 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGV------LDKIKFIQGDATQLS-QYVDSV 287 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTC------GGGCEEEECCGGGGG-GTCSCE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCC------CCceEEEECChhhCC-cccCCc
Confidence 4567899999999999999999876656999999999999999998753321 357999999999863 345789
Q ss_pred cEEEEcCCCCCCC--CCCc--chHHHHHHHHhcc
Q 038076 218 AGIVVDLFSEGKV--LPQL--EEVATWLKLKDRL 247 (345)
Q Consensus 218 D~Ii~D~f~~~~~--p~~l--~t~ef~~~~~~~L 247 (345)
|+|++|..-+... ...+ .-.++++.+++.|
T Consensus 288 D~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l 321 (373)
T 3tm4_A 288 DFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL 321 (373)
T ss_dssp EEEEEECCCC------CCHHHHHHHHHHHHHHHE
T ss_pred CEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc
Confidence 9999986433211 1111 1256788888888
No 232
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.84 E-value=1.5e-09 Score=100.94 Aligned_cols=116 Identities=16% Similarity=0.079 Sum_probs=75.5
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCC--------C-CCC--------------
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKP--------T-ATG-------------- 196 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~--------~-~~~-------------- 196 (345)
++.+||+||||+|.... +....+..+|+++|+++.+++.|++++........ . ...
T Consensus 71 ~~~~vLDiGcG~G~~~~-l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQL-LSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGG-TTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHH-HhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 56799999999999543 33333457999999999999999987642110000 0 000
Q ss_pred CcEEEEEcccccccc-----cCCCcccEEEEcCCCCCCCCCCc-chHHHHHHHHhccCCCcEEEEEe
Q 038076 197 GVLQVHIGDVFSPSE-----DASGRYAGIVVDLFSEGKVLPQL-EEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 197 ~rv~v~~gDa~~~l~-----~~~~~yD~Ii~D~f~~~~~p~~l-~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
..++++.+|+.+.+. ..+++||+|++-..-. .++..+ .-..+++++++.|+|||.+++..
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~-~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLE-AVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHH-HHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhh-hhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 125677889887432 1246799999742111 111111 23578999999999999998853
No 233
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.82 E-value=1.2e-08 Score=107.29 Aligned_cols=112 Identities=13% Similarity=0.099 Sum_probs=82.3
Q ss_pred CCCCCEEEEeecccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLW-PSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~-p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
.++.+||+||||+|.++..+.+.. |..+|++||+++.+++.|++.+...... .....++++++++|+.+. ....++|
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnA-kr~gl~nVefiqGDa~dL-p~~d~sF 797 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNK-EACNVKSATLYDGSILEF-DSRLHDV 797 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTT-TCSSCSEEEEEESCTTSC-CTTSCSC
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccch-hhcCCCceEEEECchHhC-CcccCCe
Confidence 367899999999999999999876 4579999999999999998854210000 001235899999999885 3356889
Q ss_pred cEEEEcCCCCCCCCCCcch---HHHHHHHHhccCCCcEEEEEec
Q 038076 218 AGIVVDLFSEGKVLPQLEE---VATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t---~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
|+|++.. +..++.. ..+++.+.+.|+|| .+++...
T Consensus 798 DlVV~~e-----VLeHL~dp~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 798 DIGTCLE-----VIEHMEEDQACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp CEEEEES-----CGGGSCHHHHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred eEEEEeC-----chhhCChHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 9999832 2233332 34899999999999 6666553
No 234
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.82 E-value=9.1e-09 Score=91.59 Aligned_cols=97 Identities=16% Similarity=0.037 Sum_probs=76.0
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
++.+||+||||+|..+..+.+. +++|+++.+++.|++. +++++.+|+.+. ...+++||+
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~--------------~~~~~~~d~~~~-~~~~~~fD~ 105 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR--------------GVFVLKGTAENL-PLKDESFDF 105 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT--------------TCEEEECBTTBC-CSCTTCEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc--------------CCEEEEcccccC-CCCCCCeeE
Confidence 4789999999999999887643 9999999999999985 267889998774 334678999
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
|++...-. ..+ ...++++.+++.|+|||.+++......
T Consensus 106 v~~~~~l~-~~~---~~~~~l~~~~~~L~pgG~l~i~~~~~~ 143 (219)
T 1vlm_A 106 ALMVTTIC-FVD---DPERALKEAYRILKKGGYLIVGIVDRE 143 (219)
T ss_dssp EEEESCGG-GSS---CHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred EEEcchHh-hcc---CHHHHHHHHHHHcCCCcEEEEEEeCCc
Confidence 99853211 111 236799999999999999998876543
No 235
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.82 E-value=1.2e-08 Score=101.00 Aligned_cols=101 Identities=17% Similarity=0.197 Sum_probs=79.7
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
..+..+||++|||+|.++..+.+. ..+|++||+++.+++.|+++..... -. ++++.+|+.+++.. +|
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ng-------l~-v~~~~~d~~~~~~~---~f 354 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINN-------VD-AEFEVASDREVSVK---GF 354 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHT-------CC-EEEEECCTTTCCCT---TC
T ss_pred cCCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcC-------Cc-EEEEECChHHcCcc---CC
Confidence 345689999999999999998875 5699999999999999999875332 13 99999999998642 89
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
|+|++|.... -...++++.++ .|+|+|++.+.+.
T Consensus 355 D~Vv~dPPr~------g~~~~~~~~l~-~l~p~givyvsc~ 388 (425)
T 2jjq_A 355 DTVIVDPPRA------GLHPRLVKRLN-REKPGVIVYVSCN 388 (425)
T ss_dssp SEEEECCCTT------CSCHHHHHHHH-HHCCSEEEEEESC
T ss_pred CEEEEcCCcc------chHHHHHHHHH-hcCCCcEEEEECC
Confidence 9999985432 12345666665 4999999988763
No 236
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.79 E-value=1.9e-08 Score=93.86 Aligned_cols=114 Identities=13% Similarity=0.098 Sum_probs=75.7
Q ss_pred CCCCEEEEeecccH----HHHHHHHhCC----CCEEEEEECCHHHHHHHHHhcC-------CC------------CCCCC
Q 038076 140 PNGPIAIYGLGGGT----AAHLMLDLWP----SLKLEGWEIDEILIDKVRDYFG-------LS------------DLEKP 192 (345)
Q Consensus 140 ~p~~VLiIG~G~G~----~~~~l~~~~p----~~~v~~VEidp~vi~~A~~~f~-------~~------------~~~~~ 192 (345)
++.+|+++|||+|. ++..+.+..+ +.+|+++|||+.+++.|++... ++ ...++
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45689999999997 6666666534 4699999999999999998531 00 00000
Q ss_pred CC-----CCCcEEEEEcccccccccCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 193 TA-----TGGVLQVHIGDVFSPSEDASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 193 ~~-----~~~rv~v~~gDa~~~l~~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
.+ -..++++..+|..+.--...++||+|+|--.- .+.. .-...+.++.+.+.|+|||.+++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvl-iyf~-~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVM-IYFD-KTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSG-GGSC-HHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCch-HhCC-HHHHHHHHHHHHHHhCCCcEEEE
Confidence 00 01368999999887200114689999982100 0111 11236789999999999999986
No 237
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.79 E-value=1.7e-09 Score=99.51 Aligned_cols=118 Identities=12% Similarity=0.002 Sum_probs=76.5
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCC-------------CC---------CCC
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKP-------------TA---------TGG 197 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~-------------~~---------~~~ 197 (345)
+..+||+||||+|..+..+... ...+|+++|++|.+++.|+++.......-. .. ...
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~-~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACD-SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHh-hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 4578999999999877655442 224799999999999999987642210000 00 011
Q ss_pred cEE-EEEcccccccc---cCCCcccEEEEcCCCCCCCCCCc-chHHHHHHHHhccCCCcEEEEEecC
Q 038076 198 VLQ-VHIGDVFSPSE---DASGRYAGIVVDLFSEGKVLPQL-EEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 198 rv~-v~~gDa~~~l~---~~~~~yD~Ii~D~f~~~~~p~~l-~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+++ ++.+|..+... ...++||+|++-..-. ++.... .-..+++++++.|||||.+++....
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~-~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAME-CACCSLDAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHH-HHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHHHH-HhcCCHHHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 344 88999887421 1246899999743221 111111 1246899999999999999987543
No 238
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.77 E-value=1.3e-08 Score=98.38 Aligned_cols=98 Identities=14% Similarity=0.239 Sum_probs=76.3
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|..+..+.+.+|+.+++++|+ |.+++.|+++ ++++++.+|..+.+ +. ||
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------------~~v~~~~~d~~~~~---~~-~D 269 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-------------SGIEHVGGDMFASV---PQ-GD 269 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------------TTEEEEECCTTTCC---CC-EE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-------------CCCEEEeCCcccCC---CC-CC
Confidence 4568999999999999999999999999999999 9999876541 46999999998732 23 99
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
+|++-..-+ ..+. ....++++++++.|+|||.+++.
T Consensus 270 ~v~~~~~lh-~~~d-~~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 270 AMILKAVCH-NWSD-EKCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp EEEEESSGG-GSCH-HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEecccc-cCCH-HHHHHHHHHHHHhcCCCCEEEEE
Confidence 999742211 1111 12237999999999999998875
No 239
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.76 E-value=2.9e-08 Score=98.25 Aligned_cols=103 Identities=15% Similarity=0.139 Sum_probs=79.8
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc---CCC
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED---ASG 215 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~---~~~ 215 (345)
.+..+||++|||+|.++..+.+. ..+|+++|+++.+++.|+++..... -++++++.+|+.+++.. ..+
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~-------~~~v~f~~~d~~~~l~~~~~~~~ 355 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNG-------LQNVTFYHENLEEDVTKQPWAKN 355 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTT-------CCSEEEEECCTTSCCSSSGGGTT
T ss_pred CCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcC-------CCceEEEECCHHHHhhhhhhhcC
Confidence 35678999999999999999875 6799999999999999999875332 24799999999997643 346
Q ss_pred cccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 216 RYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
+||+|++|....+ . .++++.+. .++|++++.+.+.
T Consensus 356 ~fD~Vv~dPPr~g------~-~~~~~~l~-~~~p~~ivyvsc~ 390 (433)
T 1uwv_A 356 GFDKVLLDPARAG------A-AGVMQQII-KLEPIRIVYVSCN 390 (433)
T ss_dssp CCSEEEECCCTTC------C-HHHHHHHH-HHCCSEEEEEESC
T ss_pred CCCEEEECCCCcc------H-HHHHHHHH-hcCCCeEEEEECC
Confidence 8999999743321 2 25666665 4899999877654
No 240
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.76 E-value=1.9e-08 Score=97.31 Aligned_cols=101 Identities=15% Similarity=0.137 Sum_probs=76.7
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+||+||||+|..+..+++.+|+.+++++|+ |.+++.|++ .++++++.+|..+.+ ++. |
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------------~~~v~~~~~d~~~~~---p~~-D 263 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA-------------FSGVEHLGGDMFDGV---PKG-D 263 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-------------CTTEEEEECCTTTCC---CCC-S
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh-------------cCCCEEEecCCCCCC---CCC-C
Confidence 3467899999999999999999999999999999 999887653 257999999998743 223 9
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+|++-..-+ ..+. -...++++++++.|+|||.+++.-..
T Consensus 264 ~v~~~~vlh-~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 264 AIFIKWICH-DWSD-EHCLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp EEEEESCGG-GBCH-HHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EEEEechhh-cCCH-HHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 998743221 0111 12246899999999999998876443
No 241
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.75 E-value=3.9e-08 Score=92.00 Aligned_cols=75 Identities=23% Similarity=0.310 Sum_probs=61.7
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+||+||||+|.++..+++. +.+|++||+|+.+++.+++.+.... ..++++++.+|+.++ .-..||
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~--~~~v~~vD~~~~~~~~a~~~~~~~~------~~~~v~~~~~D~~~~---~~~~fD 95 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEK--AKKVVACELDPRLVAELHKRVQGTP------VASKLQVLVGDVLKT---DLPFFD 95 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTST------TGGGEEEEESCTTTS---CCCCCS
T ss_pred CCCCEEEEEcCcccHHHHHHHhh--CCEEEEEECCHHHHHHHHHHHHhcC------CCCceEEEEcceecc---cchhhc
Confidence 45678999999999999999986 4699999999999999999875321 135899999999875 234799
Q ss_pred EEEEcC
Q 038076 219 GIVVDL 224 (345)
Q Consensus 219 ~Ii~D~ 224 (345)
+|++++
T Consensus 96 ~vv~nl 101 (285)
T 1zq9_A 96 TCVANL 101 (285)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 999864
No 242
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.75 E-value=1.5e-08 Score=97.17 Aligned_cols=100 Identities=16% Similarity=0.199 Sum_probs=77.1
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+||+||||+|..+..+.+.+|+.+++++|+ |.+++.|+++ ++++++.+|..+.+ + .||
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------------~~v~~~~~d~~~~~---p-~~D 248 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS-------------NNLTYVGGDMFTSI---P-NAD 248 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB-------------TTEEEEECCTTTCC---C-CCS
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC-------------CCcEEEeccccCCC---C-Ccc
Confidence 4568999999999999999999999999999999 9999887652 34999999987632 2 399
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCC---CcEEEEEec
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMP---NGRFMVNCG 258 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~p---gGvlvvn~~ 258 (345)
+|++-..-+ ..+. ....++++++++.|+| ||.+++.-.
T Consensus 249 ~v~~~~~lh-~~~d-~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 249 AVLLKYILH-NWTD-KDCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp EEEEESCGG-GSCH-HHHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred EEEeehhhc-cCCH-HHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 999742211 1111 1223789999999999 999877643
No 243
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.75 E-value=1.6e-08 Score=95.24 Aligned_cols=98 Identities=12% Similarity=-0.008 Sum_probs=71.3
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE-cccccccc-c-CCC
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI-GDVFSPSE-D-ASG 215 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~-gDa~~~l~-~-~~~ 215 (345)
.+.++||+||||+|.++..+++. +..+|++||+++.|++.+.+. ++++.... .|++..-. . ...
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~------------~~rv~~~~~~ni~~l~~~~l~~~ 150 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQ------------DDRVRSMEQYNFRYAEPVDFTEG 150 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHT------------CTTEEEECSCCGGGCCGGGCTTC
T ss_pred ccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh------------CcccceecccCceecchhhCCCC
Confidence 34678999999999999988875 557999999999999986542 34554443 24443211 1 223
Q ss_pred cccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 216 RYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
.||+|++|..-. .+ ..++..+++.|+|||.+++-
T Consensus 151 ~fD~v~~d~sf~-----sl--~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 151 LPSFASIDVSFI-----SL--NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp CCSEEEECCSSS-----CG--GGTHHHHHHHSCTTCEEEEE
T ss_pred CCCEEEEEeeHh-----hH--HHHHHHHHHHcCcCCEEEEE
Confidence 599999986332 11 56899999999999999875
No 244
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.74 E-value=2.7e-08 Score=96.16 Aligned_cols=100 Identities=14% Similarity=0.136 Sum_probs=76.5
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+||+||||+|..+..+++.+|+.+++++|+ |.+++.|++ .++++++.+|..+-+ ++. |
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------------~~~v~~~~~D~~~~~---p~~-D 261 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ-------------FPGVTHVGGDMFKEV---PSG-D 261 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-------------CTTEEEEECCTTTCC---CCC-S
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh-------------cCCeEEEeCCcCCCC---CCC-C
Confidence 3568999999999999999999999999999999 999887653 257999999998732 223 9
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
+|++-..-+. .+. -....+++++++.|+|||.+++.-.
T Consensus 262 ~v~~~~vlh~-~~d-~~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 262 TILMKWILHD-WSD-QHCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp EEEEESCGGG-SCH-HHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred EEEehHHhcc-CCH-HHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 9987432211 111 1234789999999999999887543
No 245
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.72 E-value=2.2e-08 Score=91.08 Aligned_cols=99 Identities=14% Similarity=-0.020 Sum_probs=69.3
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccc--cCCC-
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSE--DASG- 215 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~--~~~~- 215 (345)
.+.++||+||||+|.++..+++. +..+|++||+++.+++.|++.. +++......-..++. ....
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~------------~~~~~~~~~~~~~~~~~~~~~~ 102 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSD------------ERVVVMEQFNFRNAVLADFEQG 102 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTC------------TTEEEECSCCGGGCCGGGCCSC
T ss_pred CCCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhC------------ccccccccceEEEeCHhHcCcC
Confidence 34578999999999999999876 4469999999999999988743 233333222222222 1122
Q ss_pred cccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEe
Q 038076 216 RYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
.||.+.+|+.-. .+ ..++.++++.|+|||.+++-+
T Consensus 103 ~~d~~~~D~v~~-----~l--~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 103 RPSFTSIDVSFI-----SL--DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp CCSEEEECCSSS-----CG--GGTHHHHHHHSCTTCEEEEEE
T ss_pred CCCEEEEEEEhh-----hH--HHHHHHHHHhccCCCEEEEEE
Confidence 467777775321 11 568999999999999998854
No 246
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.70 E-value=1.3e-08 Score=99.32 Aligned_cols=103 Identities=14% Similarity=0.023 Sum_probs=78.7
Q ss_pred CCCCCEEEEeecccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLW-PSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~-p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
.++.+||++|||+|.++..+.++. +..++++||+||.+++.| ++++++++|..++. ..++|
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------------~~~~~~~~D~~~~~--~~~~f 99 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------------PWAEGILADFLLWE--PGEAF 99 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------------TTEEEEESCGGGCC--CSSCE
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------------CCCcEEeCChhhcC--ccCCC
Confidence 345699999999999999998765 578999999999999776 25899999999874 34789
Q ss_pred cEEEEcCCCCCC-C--------CCCc----------------chHHHHHHHHhccCCCcEEEEEecC
Q 038076 218 AGIVVDLFSEGK-V--------LPQL----------------EEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 218 D~Ii~D~f~~~~-~--------p~~l----------------~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
|+|+++.+-... . +... ....|++.+.+.|+|||.+++-+..
T Consensus 100 D~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 100 DLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp EEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred CEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 999997432211 0 0000 1126899999999999999887764
No 247
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.70 E-value=6e-09 Score=101.97 Aligned_cols=105 Identities=14% Similarity=0.085 Sum_probs=74.3
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+||+||||+|.++..+.+. +.+++++|+++.+++.|++. +.+. ....+..+|+.. +...+++||
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~-~~~~--------~~~~~~~~~~~~-l~~~~~~fD 173 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK-GIRV--------RTDFFEKATADD-VRRTEGPAN 173 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT-TCCE--------ECSCCSHHHHHH-HHHHHCCEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc-CCCc--------ceeeechhhHhh-cccCCCCEE
Confidence 45679999999999999999875 56999999999999999987 3221 011111223222 222468999
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+|++...-. +++ .-.++++++++.|+|||++++....
T Consensus 174 ~I~~~~vl~-h~~---d~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 174 VIYAANTLC-HIP---YVQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp EEEEESCGG-GCT---THHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEECChHH-hcC---CHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 999842211 122 3468999999999999999987654
No 248
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.70 E-value=1.5e-07 Score=89.36 Aligned_cols=116 Identities=11% Similarity=0.070 Sum_probs=83.7
Q ss_pred CCCCCEEEEeecccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccC--CC
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLW-PSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDA--SG 215 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~-p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~--~~ 215 (345)
.+..+||++|+|.|..+..+++.. +..+|+++|+++..++.+++++.-.. -.+++++.+|+.++.... ..
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g-------~~~v~~~~~D~~~~~~~~~~~~ 173 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG-------VSCCELAEEDFLAVSPSDPRYH 173 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT-------CCSEEEEECCGGGSCTTCGGGT
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-------CCeEEEEeCChHhcCccccccC
Confidence 356789999999999999988764 56899999999999999998874221 246999999999875321 15
Q ss_pred cccEEEEcCCCCCC-C----CCC----------c-----chHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 216 RYAGIVVDLFSEGK-V----LPQ----------L-----EEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~-~----p~~----------l-----~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
+||.|++|+...+. . |.. + ...++++.+.+.|+ ||.++....+...
T Consensus 174 ~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~ 239 (309)
T 2b9e_A 174 EVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQ 239 (309)
T ss_dssp TEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCG
T ss_pred CCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCCh
Confidence 79999999865321 1 111 0 12356777777776 9998877665543
No 249
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.67 E-value=1e-07 Score=89.69 Aligned_cols=117 Identities=15% Similarity=0.151 Sum_probs=80.3
Q ss_pred CCCCCEEEEeecc------cHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEE-EEccccccc
Q 038076 139 VPNGPIAIYGLGG------GTAAHLMLDLWP-SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQV-HIGDVFSPS 210 (345)
Q Consensus 139 ~~p~~VLiIG~G~------G~~~~~l~~~~p-~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v-~~gDa~~~l 210 (345)
.+..+||+||||+ |+ ..+.+..| +.+|++||++|. ++ ++++ +++|+.+..
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~----------v~----------~v~~~i~gD~~~~~ 119 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF----------VS----------DADSTLIGDCATVH 119 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC----------BC----------SSSEEEESCGGGCC
T ss_pred CCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC----------CC----------CCEEEEECccccCC
Confidence 4567999999954 76 44455555 689999999998 11 3667 999998752
Q ss_pred ccCCCcccEEEEcCCCCCC---CCCC----cchHHHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHH
Q 038076 211 EDASGRYAGIVVDLFSEGK---VLPQ----LEEVATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHN 283 (345)
Q Consensus 211 ~~~~~~yD~Ii~D~f~~~~---~p~~----l~t~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~ 283 (345)
..++||+|++|...... ...+ -.-.++++.+++.|+|||.+++.++.... ..
T Consensus 120 --~~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~-------------------~~ 178 (290)
T 2xyq_A 120 --TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW-------------------NA 178 (290)
T ss_dssp --CSSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC-------------------CH
T ss_pred --ccCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCC-------------------HH
Confidence 24689999998643210 0111 12247899999999999999998765443 13
Q ss_pred HHHHHHHHH-CCCCEEE
Q 038076 284 SAIRALSEA-FPGKVSW 299 (345)
Q Consensus 284 ~~~~~l~~~-F~~~v~~ 299 (345)
.+.+.+++. |. .+.+
T Consensus 179 ~l~~~l~~~GF~-~v~~ 194 (290)
T 2xyq_A 179 DLYKLMGHFSWW-TAFV 194 (290)
T ss_dssp HHHHHHTTEEEE-EEEE
T ss_pred HHHHHHHHcCCc-EEEE
Confidence 566667776 76 4543
No 250
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.67 E-value=1.9e-08 Score=96.25 Aligned_cols=110 Identities=12% Similarity=0.002 Sum_probs=82.9
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCC-----CEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCC
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPS-----LKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDAS 214 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~-----~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~ 214 (345)
+..+||++|||+|.++..+.+..+. .+++++|+||.++++|+....... .+++++.+|+.... ..
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g--------~~~~i~~~D~l~~~--~~ 199 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR--------QKMTLLHQDGLANL--LV 199 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT--------CCCEEEESCTTSCC--CC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC--------CCceEEECCCCCcc--cc
Confidence 4578999999999999988876543 799999999999999998764321 25789999987743 35
Q ss_pred CcccEEEEcCCCCCC------------CCCCc--chHHHHHHHHhccCCCcEEEEEecC
Q 038076 215 GRYAGIVVDLFSEGK------------VLPQL--EEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~~------------~p~~l--~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
++||+|+.+.+-+.. .+... ....|++.+.+.|+|||.+++-+..
T Consensus 200 ~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~ 258 (344)
T 2f8l_A 200 DPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPD 258 (344)
T ss_dssp CCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEG
T ss_pred CCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECc
Confidence 789999998642110 00011 2246899999999999998887754
No 251
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.66 E-value=1.3e-07 Score=88.09 Aligned_cols=99 Identities=16% Similarity=0.143 Sum_probs=71.4
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+. +||+||||+|.++..+++. +.+|++||+|+.+++.+++.+. +.+++++++|+.++--.....+|
T Consensus 46 ~~~-~VLEIG~G~G~lt~~L~~~--~~~V~avEid~~~~~~l~~~~~----------~~~v~vi~~D~l~~~~~~~~~~~ 112 (271)
T 3fut_A 46 FTG-PVFEVGPGLGALTRALLEA--GAEVTAIEKDLRLRPVLEETLS----------GLPVRLVFQDALLYPWEEVPQGS 112 (271)
T ss_dssp CCS-CEEEECCTTSHHHHHHHHT--TCCEEEEESCGGGHHHHHHHTT----------TSSEEEEESCGGGSCGGGSCTTE
T ss_pred CCC-eEEEEeCchHHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcC----------CCCEEEEECChhhCChhhccCcc
Confidence 445 9999999999999999986 3789999999999999999875 24799999999986322223689
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
.|+.++ |....+.-.++.+....-+.+++++.
T Consensus 113 ~iv~Nl------Py~iss~il~~ll~~~~~~~~~lm~Q 144 (271)
T 3fut_A 113 LLVANL------PYHIATPLVTRLLKTGRFARLVFLVQ 144 (271)
T ss_dssp EEEEEE------CSSCCHHHHHHHHHHCCEEEEEEEEE
T ss_pred EEEecC------cccccHHHHHHHhcCCCCCEEEEEee
Confidence 988754 33444444444443322235566654
No 252
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.65 E-value=2.2e-08 Score=92.69 Aligned_cols=104 Identities=13% Similarity=0.084 Sum_probs=81.2
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+|.+||+||||.|-++..+....|..++.++|||+.+++++++++... +.+.++.+.|...- ..+++||
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~--------g~~~~~~v~D~~~~--~p~~~~D 200 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRL--------NVPHRTNVADLLED--RLDEPAD 200 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHT--------TCCEEEEECCTTTS--CCCSCCS
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhc--------CCCceEEEeeeccc--CCCCCcc
Confidence 5689999999999999999888779999999999999999999998543 34578888887653 3678999
Q ss_pred EEEEcCCCCCCCCCCcchH---HHHHHHHhccCCCcEEEEEecC
Q 038076 219 GIVVDLFSEGKVLPQLEEV---ATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~---ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+|++-. ..++|... ..| .+.+.|+|+|+++ |+..
T Consensus 201 vaL~lk-----ti~~Le~q~kg~g~-~ll~aL~~~~vvV-Sfp~ 237 (281)
T 3lcv_B 201 VTLLLK-----TLPCLETQQRGSGW-EVIDIVNSPNIVV-TFPT 237 (281)
T ss_dssp EEEETT-----CHHHHHHHSTTHHH-HHHHHSSCSEEEE-EEEC
T ss_pred hHHHHH-----HHHHhhhhhhHHHH-HHHHHhCCCCEEE-eccc
Confidence 998721 11222222 345 7899999999986 5554
No 253
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.64 E-value=1.6e-07 Score=91.61 Aligned_cols=113 Identities=12% Similarity=0.114 Sum_probs=82.0
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCC--------------------------------------CEEEEEECCHHHHHH
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPS--------------------------------------LKLEGWEIDEILIDK 179 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~--------------------------------------~~v~~VEidp~vi~~ 179 (345)
..+...+++.+||+|+++.++.....+ .+|+++|+|+.+++.
T Consensus 192 ~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~ 271 (384)
T 3ldg_A 192 WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEI 271 (384)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHH
Confidence 345678999999999999887754222 569999999999999
Q ss_pred HHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCC--CcEEEEEe
Q 038076 180 VRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMP--NGRFMVNC 257 (345)
Q Consensus 180 A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~p--gGvlvvn~ 257 (345)
|+++...... ..+++++.+|+.++.. +++||+|++|.+-+..+...-...++|+.+.+.|++ ||.+.+-.
T Consensus 272 Ar~Na~~~gl------~~~I~~~~~D~~~l~~--~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 343 (384)
T 3ldg_A 272 ARKNAREVGL------EDVVKLKQMRLQDFKT--NKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILT 343 (384)
T ss_dssp HHHHHHHTTC------TTTEEEEECCGGGCCC--CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred HHHHHHHcCC------CCceEEEECChHHCCc--cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEE
Confidence 9998753332 3579999999999743 458999999865443322222235677777777766 88776544
Q ss_pred c
Q 038076 258 G 258 (345)
Q Consensus 258 ~ 258 (345)
.
T Consensus 344 ~ 344 (384)
T 3ldg_A 344 N 344 (384)
T ss_dssp S
T ss_pred C
Confidence 4
No 254
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.63 E-value=7.1e-08 Score=93.42 Aligned_cols=99 Identities=11% Similarity=-0.022 Sum_probs=72.9
Q ss_pred CCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc-CC-----
Q 038076 141 NGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED-AS----- 214 (345)
Q Consensus 141 p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~-~~----- 214 (345)
+.+||++|||+|+++..+.+. ..+|++||++|.+++.|+++..... -++++++.+|+.+++.. ..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~ng-------~~~v~~~~~d~~~~~~~~~~~~~~~ 284 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAANH-------IDNVQIIRMAAEEFTQAMNGVREFN 284 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHTT-------CCSEEEECCCSHHHHHHHSSCCCCT
T ss_pred CCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcC-------CCceEEEECCHHHHHHHHhhccccc
Confidence 578999999999999988763 4699999999999999999875432 24799999999987643 11
Q ss_pred ---------CcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 215 ---------GRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 215 ---------~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
.+||+|++|....+ . ...+.+.|+++|.+++...
T Consensus 285 ~l~~~~~~~~~fD~Vv~dPPr~g------~----~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 285 RLQGIDLKSYQCETIFVDPPRSG------L----DSETEKMVQAYPRILYISC 327 (369)
T ss_dssp TGGGSCGGGCCEEEEEECCCTTC------C----CHHHHHHHTTSSEEEEEES
T ss_pred cccccccccCCCCEEEECcCccc------c----HHHHHHHHhCCCEEEEEEC
Confidence 37999999854321 1 2334445567777665443
No 255
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.61 E-value=1.1e-07 Score=93.05 Aligned_cols=113 Identities=15% Similarity=0.077 Sum_probs=78.8
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCC--------------------------------------CEEEEEECCHHHHHH
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPS--------------------------------------LKLEGWEIDEILIDK 179 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~--------------------------------------~~v~~VEidp~vi~~ 179 (345)
..+...+|+.+||+|+++.++.....+ .+|+++|+||.+++.
T Consensus 199 ~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~ 278 (393)
T 3k0b_A 199 WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEI 278 (393)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHH
Confidence 345678999999999999887754222 569999999999999
Q ss_pred HHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCC--CcEEEEEe
Q 038076 180 VRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMP--NGRFMVNC 257 (345)
Q Consensus 180 A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~p--gGvlvvn~ 257 (345)
|+++...... +.+++++.+|+.++.. +++||+|++|.+-+......-.-.++|+.+.+.|++ ||.+.+-+
T Consensus 279 Ar~Na~~~gl------~~~I~~~~~D~~~~~~--~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 350 (393)
T 3k0b_A 279 AKQNAVEAGL------GDLITFRQLQVADFQT--EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLT 350 (393)
T ss_dssp HHHHHHHTTC------TTCSEEEECCGGGCCC--CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred HHHHHHHcCC------CCceEEEECChHhCCC--CCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9998753332 3479999999999743 468999999754322111001123567766666655 77776544
Q ss_pred c
Q 038076 258 G 258 (345)
Q Consensus 258 ~ 258 (345)
.
T Consensus 351 ~ 351 (393)
T 3k0b_A 351 S 351 (393)
T ss_dssp C
T ss_pred C
Confidence 3
No 256
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.60 E-value=3.7e-07 Score=83.30 Aligned_cols=83 Identities=17% Similarity=0.106 Sum_probs=61.7
Q ss_pred HHHHhhccccCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccc
Q 038076 129 WDEFVSLPAIVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFS 208 (345)
Q Consensus 129 ~~~~~~l~~~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~ 208 (345)
.+.+.......+..+||+||||+|.++..+++.. .+|++||+|+.+++.+++.+.. .++++++++|+.+
T Consensus 19 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~---------~~~v~~~~~D~~~ 87 (244)
T 1qam_A 19 IDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVD---------HDNFQVLNKDILQ 87 (244)
T ss_dssp HHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTT---------CCSEEEECCCGGG
T ss_pred HHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhcc---------CCCeEEEEChHHh
Confidence 3444333333456789999999999999999873 7999999999999999998752 3589999999988
Q ss_pred ccccCCCcccEEEEc
Q 038076 209 PSEDASGRYAGIVVD 223 (345)
Q Consensus 209 ~l~~~~~~yD~Ii~D 223 (345)
+--.....| .|+.+
T Consensus 88 ~~~~~~~~~-~vv~n 101 (244)
T 1qam_A 88 FKFPKNQSY-KIFGN 101 (244)
T ss_dssp CCCCSSCCC-EEEEE
T ss_pred CCcccCCCe-EEEEe
Confidence 632222445 45554
No 257
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.60 E-value=8.6e-08 Score=93.61 Aligned_cols=119 Identities=14% Similarity=0.137 Sum_probs=81.3
Q ss_pred HhhccccCCCCCEEEEeecccHHHHHHHHhCC--------------------------------------CCEEEEEECC
Q 038076 132 FVSLPAIVPNGPIAIYGLGGGTAAHLMLDLWP--------------------------------------SLKLEGWEID 173 (345)
Q Consensus 132 ~~~l~~~~~p~~VLiIG~G~G~~~~~l~~~~p--------------------------------------~~~v~~VEid 173 (345)
|..+....+..++|+.|||+|+++.++..... ..+|+++|+|
T Consensus 187 ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid 266 (385)
T 3ldu_A 187 LIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDID 266 (385)
T ss_dssp HHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESC
T ss_pred HHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECC
Confidence 33333334568899999999999988875421 2579999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCC--Cc
Q 038076 174 EILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMP--NG 251 (345)
Q Consensus 174 p~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~p--gG 251 (345)
|.+++.|+++...... +.+++++.+|+.++.. +++||+|++|.+-+......-.-.++|+.+.+.|++ ||
T Consensus 267 ~~ai~~Ar~Na~~~gl------~~~i~~~~~D~~~l~~--~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~ 338 (385)
T 3ldu_A 267 EESIDIARENAEIAGV------DEYIEFNVGDATQFKS--EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNW 338 (385)
T ss_dssp HHHHHHHHHHHHHHTC------GGGEEEEECCGGGCCC--SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSC
T ss_pred HHHHHHHHHHHHHcCC------CCceEEEECChhhcCc--CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCC
Confidence 9999999998753321 3479999999999743 468999999754332111011124567777666765 77
Q ss_pred EEEEEec
Q 038076 252 RFMVNCG 258 (345)
Q Consensus 252 vlvvn~~ 258 (345)
.+.+-+.
T Consensus 339 ~~~iit~ 345 (385)
T 3ldu_A 339 SYYLITS 345 (385)
T ss_dssp EEEEEES
T ss_pred EEEEEEC
Confidence 6654443
No 258
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.59 E-value=1.5e-07 Score=88.75 Aligned_cols=74 Identities=16% Similarity=0.147 Sum_probs=61.8
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
..+..+||+||||+|.++..+++. ..+|++||+|+.+++.+++.+. . .++++++++|+.++- -....|
T Consensus 48 ~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~--~-------~~~v~vi~gD~l~~~-~~~~~f 115 (295)
T 3gru_A 48 LTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKE--L-------YNNIEIIWGDALKVD-LNKLDF 115 (295)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHH--H-------CSSEEEEESCTTTSC-GGGSCC
T ss_pred CCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhc--c-------CCCeEEEECchhhCC-cccCCc
Confidence 345678999999999999999986 5799999999999999999875 1 357999999998852 233579
Q ss_pred cEEEEc
Q 038076 218 AGIVVD 223 (345)
Q Consensus 218 D~Ii~D 223 (345)
|.|+.+
T Consensus 116 D~Iv~N 121 (295)
T 3gru_A 116 NKVVAN 121 (295)
T ss_dssp SEEEEE
T ss_pred cEEEEe
Confidence 999975
No 259
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.59 E-value=7.8e-08 Score=90.58 Aligned_cols=74 Identities=19% Similarity=0.220 Sum_probs=57.3
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+||+||||+|.++..+++. +.+|++||+|+.+++.+++.+.... .++++++.+|+.++- ..+||
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~-------~~~v~~~~~D~~~~~---~~~~D 108 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEG-------YNNLEVYEGDAIKTV---FPKFD 108 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTT-------CCCEEC----CCSSC---CCCCS
T ss_pred CCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcC-------CCceEEEECchhhCC---cccCC
Confidence 45678999999999999998875 5799999999999999998874221 257999999998862 35899
Q ss_pred EEEEcC
Q 038076 219 GIVVDL 224 (345)
Q Consensus 219 ~Ii~D~ 224 (345)
+|++|.
T Consensus 109 ~Vv~n~ 114 (299)
T 2h1r_A 109 VCTANI 114 (299)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 999975
No 260
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.57 E-value=1.1e-07 Score=90.01 Aligned_cols=78 Identities=14% Similarity=0.213 Sum_probs=65.0
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccc---ccCC-
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPS---EDAS- 214 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l---~~~~- 214 (345)
.+..+||++|||+|..+..+++..|+.+|++||+||.+++.|++++... +++++++++|+.+.- ...+
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~--------g~~v~~v~~d~~~l~~~l~~~g~ 96 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEF--------SDRVSLFKVSYREADFLLKTLGI 96 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGG--------TTTEEEEECCGGGHHHHHHHTTC
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc--------CCcEEEEECCHHHHHHHHHhcCC
Confidence 4567999999999999999999888889999999999999999987421 268999999987742 2111
Q ss_pred CcccEEEEcC
Q 038076 215 GRYAGIVVDL 224 (345)
Q Consensus 215 ~~yD~Ii~D~ 224 (345)
.+||.|++|+
T Consensus 97 ~~~D~Vl~D~ 106 (301)
T 1m6y_A 97 EKVDGILMDL 106 (301)
T ss_dssp SCEEEEEEEC
T ss_pred CCCCEEEEcC
Confidence 5899999997
No 261
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.57 E-value=1.2e-07 Score=83.70 Aligned_cols=88 Identities=14% Similarity=0.034 Sum_probs=67.1
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++.+||+||||+|..+..+ ..+++++|+++. +++++.+|+.+. ...+++||
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l-----~~~v~~~D~s~~----------------------~~~~~~~d~~~~-~~~~~~fD 117 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSI-----RNPVHCFDLASL----------------------DPRVTVCDMAQV-PLEDESVD 117 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHC-----CSCEEEEESSCS----------------------STTEEESCTTSC-SCCTTCEE
T ss_pred CCCCeEEEECCcCCHHHHHh-----hccEEEEeCCCC----------------------CceEEEeccccC-CCCCCCEe
Confidence 45689999999999998776 268999999987 134678888773 33467899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+|++...-. .-...++++.+++.|+|||.+++....
T Consensus 118 ~v~~~~~l~-----~~~~~~~l~~~~~~L~~gG~l~i~~~~ 153 (215)
T 2zfu_A 118 VAVFCLSLM-----GTNIRDFLEEANRVLKPGGLLKVAEVS 153 (215)
T ss_dssp EEEEESCCC-----SSCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred EEEEehhcc-----ccCHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 999843221 123468999999999999999886543
No 262
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.55 E-value=1.1e-07 Score=91.29 Aligned_cols=98 Identities=13% Similarity=0.222 Sum_probs=75.3
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
+..+||+||||+|..+..+.+.+|+.+++++|+ |.+++.|++ .++++++.+|..+-+ + .||+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------------~~~v~~~~~d~~~~~---~-~~D~ 254 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG-------------NENLNFVGGDMFKSI---P-SADA 254 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC-------------CSSEEEEECCTTTCC---C-CCSE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc-------------CCCcEEEeCccCCCC---C-CceE
Confidence 568999999999999999999999999999999 888876654 135999999987722 2 4999
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCC---CcEEEEEe
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMP---NGRFMVNC 257 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~p---gGvlvvn~ 257 (345)
|++-..-+ ..+. ....++++++++.|+| ||.+++.-
T Consensus 255 v~~~~vlh-~~~d-~~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 255 VLLKWVLH-DWND-EQSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp EEEESCGG-GSCH-HHHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred EEEccccc-CCCH-HHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 99742211 1111 1234889999999999 99887753
No 263
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.53 E-value=9.4e-08 Score=97.78 Aligned_cols=102 Identities=11% Similarity=0.058 Sum_probs=74.7
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc-CCCcc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED-ASGRY 217 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~-~~~~y 217 (345)
..|.+||+||||+|.++..+.+. +.+|++||+++.++++|+.+....+ .-+++++++|+.+.... .+++|
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~-------~~~~~~~~~~~~~~~~~~~~~~f 135 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENP-------DFAAEFRVGRIEEVIAALEEGEF 135 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTST-------TSEEEEEECCHHHHHHHCCTTSC
T ss_pred CCCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcC-------CCceEEEECCHHHHhhhccCCCc
Confidence 46789999999999999999975 6899999999999999999885332 24699999999987543 46789
Q ss_pred cEEEEcCCCCCCCCCCcchHH---HHHHHHhccCCCcEEE
Q 038076 218 AGIVVDLFSEGKVLPQLEEVA---TWLKLKDRLMPNGRFM 254 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~e---f~~~~~~~L~pgGvlv 254 (345)
|+|++- .+..|+...+ ....+.+.|+++|...
T Consensus 136 D~v~~~-----e~~ehv~~~~~~~~~~~~~~tl~~~~~~~ 170 (569)
T 4azs_A 136 DLAIGL-----SVFHHIVHLHGIDEVKRLLSRLADVTQAV 170 (569)
T ss_dssp SEEEEE-----SCHHHHHHHHCHHHHHHHHHHHHHHSSEE
T ss_pred cEEEEC-----cchhcCCCHHHHHHHHHHHHHhcccccee
Confidence 999972 2222222222 2234555677777533
No 264
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.53 E-value=1.4e-07 Score=93.49 Aligned_cols=112 Identities=12% Similarity=0.013 Sum_probs=81.4
Q ss_pred CCCCEEEEeecccHHHHHHHHhC-------------CCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccc
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLW-------------PSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDV 206 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~-------------p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa 206 (345)
+..+|++.|||+|.+...+.++. +..+++++|+||.++++|+..+.+... ...+.+++++|+
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~-----~~~~~~i~~gD~ 245 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGI-----GTDRSPIVCEDS 245 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTC-----CSSCCSEEECCT
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCC-----CcCCCCEeeCCC
Confidence 35689999999999998887652 347899999999999999987644331 112577999998
Q ss_pred ccccccCCCcccEEEEcCCCCCC-CC------------CCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 207 FSPSEDASGRYAGIVVDLFSEGK-VL------------PQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 207 ~~~l~~~~~~yD~Ii~D~f~~~~-~p------------~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
.... ..++||+|+.+.+-... .. ..-....|++.+.+.|+|||.+++-+.
T Consensus 246 l~~~--~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 246 LEKE--PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp TTSC--CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCc--ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 7753 23589999997533211 00 011125799999999999999887664
No 265
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.52 E-value=2.5e-07 Score=85.33 Aligned_cols=73 Identities=15% Similarity=0.154 Sum_probs=59.1
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc-cccC--CC
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP-SEDA--SG 215 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~-l~~~--~~ 215 (345)
.+..+||+||||+|.++..+++. ..+|++||+|+.+++.+++.+.. .++++++++|+.++ +... ++
T Consensus 28 ~~~~~VLEIG~G~G~lt~~La~~--~~~V~avEid~~~~~~~~~~~~~---------~~~v~~i~~D~~~~~~~~~~~~~ 96 (255)
T 3tqs_A 28 QKTDTLVEIGPGRGALTDYLLTE--CDNLALVEIDRDLVAFLQKKYNQ---------QKNITIYQNDALQFDFSSVKTDK 96 (255)
T ss_dssp CTTCEEEEECCTTTTTHHHHTTT--SSEEEEEECCHHHHHHHHHHHTT---------CTTEEEEESCTTTCCGGGSCCSS
T ss_pred CCcCEEEEEcccccHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHhh---------CCCcEEEEcchHhCCHHHhccCC
Confidence 45678999999999999999875 47999999999999999998852 35899999999986 2221 35
Q ss_pred cccEEEEc
Q 038076 216 RYAGIVVD 223 (345)
Q Consensus 216 ~yD~Ii~D 223 (345)
+|| |+.+
T Consensus 97 ~~~-vv~N 103 (255)
T 3tqs_A 97 PLR-VVGN 103 (255)
T ss_dssp CEE-EEEE
T ss_pred CeE-EEec
Confidence 788 5543
No 266
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.50 E-value=1.1e-07 Score=87.09 Aligned_cols=103 Identities=11% Similarity=-0.020 Sum_probs=76.5
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+|.+||+||||.|.++..+. +..+++++|||+.+++.+++++... +++.++.++|...-. .+++||
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~--------g~~~~~~v~D~~~~~--~~~~~D 170 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREK--------DWDFTFALQDVLCAP--PAEAGD 170 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHT--------TCEEEEEECCTTTSC--CCCBCS
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhc--------CCCceEEEeecccCC--CCCCcc
Confidence 568999999999999988766 7899999999999999999997532 467899999987643 567999
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
+|++-.-- ...++......+ .+.++|+++|+++ |+.
T Consensus 171 vvLllk~l--h~LE~q~~~~~~-~ll~aL~~~~vvV-sfP 206 (253)
T 3frh_A 171 LALIFKLL--PLLEREQAGSAM-ALLQSLNTPRMAV-SFP 206 (253)
T ss_dssp EEEEESCH--HHHHHHSTTHHH-HHHHHCBCSEEEE-EEE
T ss_pred hHHHHHHH--HHhhhhchhhHH-HHHHHhcCCCEEE-EcC
Confidence 99762100 001111222344 6777999998875 665
No 267
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.42 E-value=1.2e-06 Score=80.43 Aligned_cols=99 Identities=19% Similarity=0.236 Sum_probs=68.1
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccc-ccCCCcc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPS-EDASGRY 217 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l-~~~~~~y 217 (345)
.+..+||+||||+|.++..+++. +..+|++||+|+.+++.+++. . .++++++++|+.++- ....+.|
T Consensus 30 ~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~-~----------~~~v~~i~~D~~~~~~~~~~~~~ 97 (249)
T 3ftd_A 30 EEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSI-G----------DERLEVINEDASKFPFCSLGKEL 97 (249)
T ss_dssp CTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTS-C----------CTTEEEECSCTTTCCGGGSCSSE
T ss_pred CCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhc-c----------CCCeEEEEcchhhCChhHccCCc
Confidence 45678999999999999999875 458999999999999999887 2 357999999998862 2212233
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhc-cCCCcEEEEE
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDR-LMPNGRFMVN 256 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~-L~pgGvlvvn 256 (345)
.|+.++ |....+.-+++.+... .-+.+++++.
T Consensus 98 -~vv~Nl------Py~i~~~il~~ll~~~~~~~~~~~m~Q 130 (249)
T 3ftd_A 98 -KVVGNL------PYNVASLIIENTVYNKDCVPLAVFMVQ 130 (249)
T ss_dssp -EEEEEC------CTTTHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred -EEEEEC------chhccHHHHHHHHhcCCCCceEEEEEe
Confidence 555543 3333444344444332 2445566654
No 268
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.41 E-value=1.3e-07 Score=93.06 Aligned_cols=79 Identities=14% Similarity=-0.074 Sum_probs=63.8
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc-CCCccc
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED-ASGRYA 218 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~-~~~~yD 218 (345)
+..+||++|||+|..+..+.+. +.+|++||+||.+++.|++++..... .-.+++++++|+.+++.. ..++||
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~-----gl~~i~~i~~Da~~~L~~~~~~~fD 165 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLN-----EGKDVNILTGDFKEYLPLIKTFHPD 165 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSC-----TTCEEEEEESCGGGSHHHHHHHCCS
T ss_pred CCCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhcc-----CCCcEEEEECcHHHhhhhccCCCce
Confidence 3689999999999999888764 57999999999999999998742100 014799999999998754 246899
Q ss_pred EEEEcCC
Q 038076 219 GIVVDLF 225 (345)
Q Consensus 219 ~Ii~D~f 225 (345)
+|++|..
T Consensus 166 vV~lDPP 172 (410)
T 3ll7_A 166 YIYVDPA 172 (410)
T ss_dssp EEEECCE
T ss_pred EEEECCC
Confidence 9999963
No 269
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=98.41 E-value=5.4e-07 Score=85.15 Aligned_cols=109 Identities=20% Similarity=0.254 Sum_probs=73.9
Q ss_pred CCCEEEEeecccHHHHH----HHHhCCCCEEEE--EECCHH---------HHHHHHHhcC-CCCCCCCCCCCC--cEEEE
Q 038076 141 NGPIAIYGLGGGTAAHL----MLDLWPSLKLEG--WEIDEI---------LIDKVRDYFG-LSDLEKPTATGG--VLQVH 202 (345)
Q Consensus 141 p~~VLiIG~G~G~~~~~----l~~~~p~~~v~~--VEidp~---------vi~~A~~~f~-~~~~~~~~~~~~--rv~v~ 202 (345)
.-+||++|.|+|..... +.+..|..+++. +|-+|. .-++.+.... .+. ..++ .++++
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~-----~~~~~v~L~l~ 171 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPE-----YEGERLSLKVL 171 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSE-----EECSSEEEEEE
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCcc-----ccCCcEEEEEE
Confidence 45799999999975432 334467665554 454321 1122221111 111 1233 46788
Q ss_pred EcccccccccCC-CcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 203 IGDVFSPSEDAS-GRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 203 ~gDa~~~l~~~~-~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
.||+++.+.... .++|+|++|+|++.. .+++++.++|+.++++++|||+++.
T Consensus 172 ~GDa~~~l~~l~~~~~Da~flDgFsP~k-NPeLWs~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 172 LGDARKRIKEVENFKADAVFHDAFSPYK-NPELWTLDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp ESCHHHHGGGCCSCCEEEEEECCSCTTT-SGGGGSHHHHHHHHTTEEEEEEEEE
T ss_pred echHHHHHhhhcccceeEEEeCCCCccc-CcccCCHHHHHHHHHHhCCCcEEEE
Confidence 999999988744 589999999999743 5679999999999999999999974
No 270
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.40 E-value=6.7e-08 Score=89.33 Aligned_cols=78 Identities=15% Similarity=0.152 Sum_probs=62.7
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCH-------HHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDE-------ILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED 212 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp-------~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~ 212 (345)
+..+||++|||+|..+..+.+. +.+|+++|++| .+++.|+++..... ...+++++.+|+.+++..
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~------~~~ri~~~~~d~~~~l~~ 154 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQD------TAARINLHFGNAAEQMPA 154 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHH------HHTTEEEEESCHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhC------CccCeEEEECCHHHHHHh
Confidence 4579999999999999998874 57999999999 99999987653221 124699999999998753
Q ss_pred CC---CcccEEEEcCC
Q 038076 213 AS---GRYAGIVVDLF 225 (345)
Q Consensus 213 ~~---~~yD~Ii~D~f 225 (345)
.+ ++||+|++|..
T Consensus 155 ~~~~~~~fD~V~~dP~ 170 (258)
T 2r6z_A 155 LVKTQGKPDIVYLDPM 170 (258)
T ss_dssp HHHHHCCCSEEEECCC
T ss_pred hhccCCCccEEEECCC
Confidence 22 68999999853
No 271
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.37 E-value=1.6e-08 Score=92.27 Aligned_cols=107 Identities=13% Similarity=0.052 Sum_probs=73.6
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+||+||||+|.++..+.+.. .+|++||+|+.+++.|++.+.. .++++++.+|+.++--..+++|
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~---------~~~v~~~~~D~~~~~~~~~~~f- 95 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKL---------NTRVTLIHQDILQFQFPNKQRY- 95 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTT---------CSEEEECCSCCTTTTCCCSSEE-
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhcc---------CCceEEEECChhhcCcccCCCc-
Confidence 456789999999999999999873 8999999999999999887641 3689999999988632223578
Q ss_pred EEEEcCCCCCCCC--C-----CcchHHHH----HHHHhccCCCcEEEEEe
Q 038076 219 GIVVDLFSEGKVL--P-----QLEEVATW----LKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 219 ~Ii~D~f~~~~~p--~-----~l~t~ef~----~~~~~~L~pgGvlvvn~ 257 (345)
.|+++..-....+ . ......++ +.+.+.|+|||.+++.+
T Consensus 96 ~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 96 KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 6666542211100 0 00111123 55778888888776543
No 272
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.36 E-value=3.7e-07 Score=85.46 Aligned_cols=106 Identities=18% Similarity=0.030 Sum_probs=81.3
Q ss_pred CCCCCEEEEeecccHHHHHHHHhC-----CCCEEEEEECCHH--------------------------HHHHHHHhcCCC
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLW-----PSLKLEGWEIDEI--------------------------LIDKVRDYFGLS 187 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~-----p~~~v~~VEidp~--------------------------vi~~A~~~f~~~ 187 (345)
..|++||++|...|..+..+.+.. ++.+|+++|..+. .++.++++|.-.
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 458899999999998887776543 4789999996421 356678877432
Q ss_pred CCCCCCCCCCcEEEEEcccccccccC-CCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 188 DLEKPTATGGVLQVHIGDVFSPSEDA-SGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 188 ~~~~~~~~~~rv~v~~gDa~~~l~~~-~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
+. ..++++++.||+.+.|... .++||+|++|+.. + -.+.++|+.+..+|+|||++++
T Consensus 185 gl-----~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y----~~~~~~Le~~~p~L~pGGiIv~ 242 (282)
T 2wk1_A 185 DL-----LDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--Y----ESTWDTLTNLYPKVSVGGYVIV 242 (282)
T ss_dssp TC-----CSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--H----HHHHHHHHHHGGGEEEEEEEEE
T ss_pred CC-----CcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--c----ccHHHHHHHHHhhcCCCEEEEE
Confidence 21 1378999999999988764 4789999999732 1 1357899999999999999987
No 273
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.31 E-value=5.4e-07 Score=77.11 Aligned_cols=89 Identities=13% Similarity=0.113 Sum_probs=67.0
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc--CCCc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED--ASGR 216 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~--~~~~ 216 (345)
.+..+||+||+|. + .+|+++.|++.|++.+. .+++++.+|+.+.... .+++
T Consensus 11 ~~g~~vL~~~~g~---------------v-~vD~s~~ml~~a~~~~~-----------~~~~~~~~d~~~~~~~~~~~~~ 63 (176)
T 2ld4_A 11 SAGQFVAVVWDKS---------------S-PVEALKGLVDKLQALTG-----------NEGRVSVENIKQLLQSAHKESS 63 (176)
T ss_dssp CTTSEEEEEECTT---------------S-CHHHHHHHHHHHHHHTT-----------TTSEEEEEEGGGGGGGCCCSSC
T ss_pred CCCCEEEEecCCc---------------e-eeeCCHHHHHHHHHhcc-----------cCcEEEEechhcCccccCCCCC
Confidence 4678999999985 2 39999999999999863 2388999999875321 5678
Q ss_pred ccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEe
Q 038076 217 YAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
||+|++-..-. +.+.. ..++++++++.|+|||.+++..
T Consensus 64 fD~V~~~~~l~-~~~~~--~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 64 FDIILSGLVPG-STTLH--SAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp EEEEEECCSTT-CCCCC--CHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeEEEECChhh-hcccC--HHHHHHHHHHHCCCCEEEEEEc
Confidence 99999832211 22122 2789999999999999999853
No 274
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.31 E-value=9.9e-07 Score=89.76 Aligned_cols=118 Identities=11% Similarity=0.003 Sum_probs=82.1
Q ss_pred CCCCEEEEeecccHHHHHHHHhCC------------------CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEE
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWP------------------SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQV 201 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p------------------~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v 201 (345)
+..+|++.+||+|.+...+.++.. ..+++++|+||.++++|+..+.+..... ..+.+.++
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~--~~~~~~~I 246 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEG--NLDHGGAI 246 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCC--BGGGTBSE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCc--cccccCCe
Confidence 456899999999998887765421 2479999999999999998775443210 00123789
Q ss_pred EEcccccccccCCCcccEEEEcCCCCCCC----------CCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 202 HIGDVFSPSEDASGRYAGIVVDLFSEGKV----------LPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 202 ~~gDa~~~l~~~~~~yD~Ii~D~f~~~~~----------p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+++|+.........+||+|+.+.+-.... +..-....|++.+.+.|+|||.+++-+..
T Consensus 247 ~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~ 314 (541)
T 2ar0_A 247 RLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPD 314 (541)
T ss_dssp EESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred EeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 99998764323457899999976432211 11112347999999999999998876653
No 275
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.30 E-value=4.1e-07 Score=84.15 Aligned_cols=81 Identities=12% Similarity=0.094 Sum_probs=62.0
Q ss_pred CCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCC---CCcEEEEEcccccccccCCCccc
Q 038076 142 GPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTAT---GGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 142 ~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~---~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+||++|||.|..+..+.+. +.+|++||++|.+.+++++.+..... +.... ..|++++.+|+.++++...++||
T Consensus 90 ~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~-~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fD 166 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYA-DAEIGGWLQERLQLIHASSLTALTDITPRPQ 166 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHH-CTTTHHHHHHHEEEEESCHHHHSTTCSSCCS
T ss_pred CEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHh-hHhhhhhhhcCEEEEECCHHHHHHhCcccCC
Confidence 79999999999999999986 46899999999987777765421000 00001 15799999999999876556899
Q ss_pred EEEEcCC
Q 038076 219 GIVVDLF 225 (345)
Q Consensus 219 ~Ii~D~f 225 (345)
+|++|..
T Consensus 167 vV~lDP~ 173 (258)
T 2oyr_A 167 VVYLDPM 173 (258)
T ss_dssp EEEECCC
T ss_pred EEEEcCC
Confidence 9999963
No 276
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.30 E-value=2.3e-06 Score=89.71 Aligned_cols=113 Identities=17% Similarity=0.137 Sum_probs=77.3
Q ss_pred CCCCCEEEEeecccHHHHHHHHhC------------------------------------------CCCEEEEEECCHHH
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLW------------------------------------------PSLKLEGWEIDEIL 176 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~------------------------------------------p~~~v~~VEidp~v 176 (345)
.+...+++.+||+|+++.++.... +..+|.++|+||.+
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 456789999999999998776531 23589999999999
Q ss_pred HHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccC-CCcccEEEEcCCCCCCCCCCcchHHHHHHHHhc---cCCCcE
Q 038076 177 IDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDA-SGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDR---LMPNGR 252 (345)
Q Consensus 177 i~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~-~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~---L~pgGv 252 (345)
++.|+++...... +.++++..+|+.++.... .++||+|+++.+-+..+...-.-.++|+.+.+. +.|||.
T Consensus 269 v~~A~~N~~~agv------~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~ 342 (703)
T 3v97_A 269 IQRARTNARLAGI------GELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWN 342 (703)
T ss_dssp HHHHHHHHHHTTC------GGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCE
T ss_pred HHHHHHHHHHcCC------CCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCe
Confidence 9999998754432 346999999999864322 238999999865432221111224555555444 457998
Q ss_pred EEEEe
Q 038076 253 FMVNC 257 (345)
Q Consensus 253 lvvn~ 257 (345)
+.+-+
T Consensus 343 ~~ilt 347 (703)
T 3v97_A 343 LSLFS 347 (703)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 76643
No 277
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.24 E-value=7.3e-07 Score=90.81 Aligned_cols=113 Identities=13% Similarity=0.057 Sum_probs=80.3
Q ss_pred CCCEEEEeecccHHHHHHHHhCC---------------CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcc
Q 038076 141 NGPIAIYGLGGGTAAHLMLDLWP---------------SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGD 205 (345)
Q Consensus 141 p~~VLiIG~G~G~~~~~l~~~~p---------------~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gD 205 (345)
+.+|++.+||+|++...+.++.. ..++.++|+||.++++|+..+.+... +.++.++.+|
T Consensus 245 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi------~~~i~i~~gD 318 (544)
T 3khk_A 245 KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGI------DFNFGKKNAD 318 (544)
T ss_dssp SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTC------CCBCCSSSCC
T ss_pred CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCC------Ccccceeccc
Confidence 45899999999998877654321 46899999999999999987754432 2345557888
Q ss_pred cccccccCCCcccEEEEcCCCCCC------------------------CCC-CcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 206 VFSPSEDASGRYAGIVVDLFSEGK------------------------VLP-QLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 206 a~~~l~~~~~~yD~Ii~D~f~~~~------------------------~p~-~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
....-.....+||+|+.+.+-... .|+ .-....|++.+.+.|+|||.+++-+..
T Consensus 319 tL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~ 397 (544)
T 3khk_A 319 SFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLAN 397 (544)
T ss_dssp TTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEET
T ss_pred hhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecc
Confidence 765433345789999997643321 111 112236999999999999998877654
No 278
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.22 E-value=2.2e-06 Score=79.59 Aligned_cols=155 Identities=10% Similarity=0.035 Sum_probs=96.3
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
+.+..+||+||||.|..+..+....+...+.++++.-++ . ..+... ...+.++..+.+|+ +...-.+++|
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl-~-------~~pi~~-~~~g~~ii~~~~~~-dv~~l~~~~~ 141 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDG-H-------EKPMNV-QSLGWNIITFKDKT-DIHRLEPVKC 141 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTT-C-------CCCCCC-CBTTGGGEEEECSC-CTTTSCCCCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccC-c-------cccccc-CcCCCCeEEEeccc-eehhcCCCCc
Confidence 345678999999999999988876566678888886332 0 001000 00122444455543 2122246789
Q ss_pred cEEEEcCCCCCCCC--CCcchHHHHHHHHhccCCC-cEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHCC
Q 038076 218 AGIVVDLFSEGKVL--PQLEEVATWLKLKDRLMPN-GRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAFP 294 (345)
Q Consensus 218 D~Ii~D~f~~~~~p--~~l~t~ef~~~~~~~L~pg-Gvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F~ 294 (345)
|+|++|..-..+.. ++..+.+.++.+.+.|+|| |.+++-+..+.. .....+++.|++.|.
T Consensus 142 DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg-----------------~~~~~l~~~lk~~F~ 204 (277)
T 3evf_A 142 DTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYM-----------------PDVLEKLELLQRRFG 204 (277)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTS-----------------HHHHHHHHHHHHHHC
T ss_pred cEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCC-----------------ccHHHHHHHHHHhcC
Confidence 99999974332111 2223334577889999999 999999987533 246789999999999
Q ss_pred CCEEEEEecCCC--CceEEEEeCCCCCch
Q 038076 295 GKVSWKRMPERN--GENFLALTGLLPDLS 321 (345)
Q Consensus 295 ~~v~~~~~~~~~--~~n~v~~a~~~p~~~ 321 (345)
.|.+.+ |... ..-.++++....+..
T Consensus 205 -~V~~~K-PaSR~~S~E~Y~V~~~r~n~~ 231 (277)
T 3evf_A 205 -GTVIRN-PLSRNSTHEMYYVSGARSNVT 231 (277)
T ss_dssp -CEEECC-TTSCTTCCCEEEESSCCCCHH
T ss_pred -CEEEEe-CCCCCCCCceEEEEecCCCcc
Confidence 666433 3322 223556666665543
No 279
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.22 E-value=8.6e-07 Score=91.50 Aligned_cols=102 Identities=17% Similarity=0.095 Sum_probs=72.8
Q ss_pred CCEEEEeecccHHHHHHHHh---C-CCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 142 GPIAIYGLGGGTAAHLMLDL---W-PSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 142 ~~VLiIG~G~G~~~~~l~~~---~-p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
..|+++|+|.|-+....++. . -..+|.+||-+|. ...|++.....+ -+.+++++++|.+++ ..+++.
T Consensus 359 ~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N~------~~dkVtVI~gd~eev--~LPEKV 429 (637)
T 4gqb_A 359 QVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFEE------WGSQVTVVSSDMREW--VAPEKA 429 (637)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHHT------TGGGEEEEESCTTTC--CCSSCE
T ss_pred cEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhcc------CCCeEEEEeCcceec--cCCccc
Confidence 45999999999985554432 1 1248999999985 555665443222 257899999999997 467999
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEE
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFM 254 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlv 254 (345)
|+||....... ...+. -.|.+....+.|+|||+++
T Consensus 430 DIIVSEwMG~f-Ll~E~-mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 430 DIIVSELLGSF-ADNEL-SPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEEECCCCBTT-BGGGC-HHHHHHHHGGGEEEEEEEE
T ss_pred CEEEEEcCccc-ccccC-CHHHHHHHHHhcCCCcEEc
Confidence 99998765432 22333 2477877888899999975
No 280
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.19 E-value=2.7e-06 Score=78.25 Aligned_cols=60 Identities=17% Similarity=0.066 Sum_probs=49.0
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP 209 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~ 209 (345)
.+..+||+||||+|.++. +.+ .+..+|++||+|+.+++.+++.+.. .++++++++|+.++
T Consensus 20 ~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~---------~~~v~~i~~D~~~~ 79 (252)
T 1qyr_A 20 QKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFL---------GPKLTIYQQDAMTF 79 (252)
T ss_dssp CTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTT---------GGGEEEECSCGGGC
T ss_pred CCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhcc---------CCceEEEECchhhC
Confidence 456789999999999999 654 3333499999999999999997741 25899999999885
No 281
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.16 E-value=7.6e-06 Score=83.25 Aligned_cols=115 Identities=13% Similarity=0.070 Sum_probs=84.3
Q ss_pred CCCCEEEEeecccHHHHHHHHhC---CCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc--cccCC
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLW---PSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP--SEDAS 214 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~---p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~--l~~~~ 214 (345)
+..+|++.+||+|++...+.++. +..++.++|+||...++|+..+.+... ..++.+++.+|.... -....
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi-----~~~~~~I~~gDtL~~d~p~~~~ 295 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGV-----PIENQFLHNADTLDEDWPTQEP 295 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTC-----CGGGEEEEESCTTTSCSCCSSC
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCC-----CcCccceEecceeccccccccc
Confidence 45689999999999988887764 357999999999999999987644331 124689999998764 22346
Q ss_pred CcccEEEEcCCCCCC------------------CC-CCcchHHHHHHHHhccC-CCcEEEEEecC
Q 038076 215 GRYAGIVVDLFSEGK------------------VL-PQLEEVATWLKLKDRLM-PNGRFMVNCGG 259 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~~------------------~p-~~l~t~ef~~~~~~~L~-pgGvlvvn~~~ 259 (345)
.+||+|+.+.+-... .| ..-....|++.+.+.|+ |||.+++-+..
T Consensus 296 ~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 296 TNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp CCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEET
T ss_pred ccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecc
Confidence 789999987543211 00 01112458999999999 99998876654
No 282
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.14 E-value=3.3e-06 Score=87.57 Aligned_cols=105 Identities=15% Similarity=-0.015 Sum_probs=72.9
Q ss_pred CCCEEEEeecccHHHHHHHHh----C---------CCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccc
Q 038076 141 NGPIAIYGLGGGTAAHLMLDL----W---------PSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVF 207 (345)
Q Consensus 141 p~~VLiIG~G~G~~~~~l~~~----~---------p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~ 207 (345)
.+.||++|||+|.+.....+. . ...+|.+||.+|..+...++... .. .+.+++++.+|.+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng------~~d~VtVI~gd~e 482 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RT------WKRRVTIIESDMR 482 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HT------TTTCSEEEESCGG
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cC------CCCeEEEEeCchh
Confidence 346999999999996543221 1 23599999999976655444331 12 1468999999999
Q ss_pred cccc----cCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEE
Q 038076 208 SPSE----DASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFM 254 (345)
Q Consensus 208 ~~l~----~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlv 254 (345)
++-- ...++.|+||...-. +....-...|.+..+.+.|+|||+++
T Consensus 483 ev~lp~~~~~~ekVDIIVSElmG--sfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 483 SLPGIAKDRGFEQPDIIVSELLG--SFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp GHHHHHHHTTCCCCSEEEECCCB--TTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred hcccccccCCCCcccEEEEeccc--cccchhccHHHHHHHHHhCCCCcEEE
Confidence 9732 126899999986643 22111235688998899999999876
No 283
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.10 E-value=3.1e-06 Score=79.06 Aligned_cols=60 Identities=22% Similarity=0.330 Sum_probs=51.1
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCC--CEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPS--LKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP 209 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~--~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~ 209 (345)
.+..+||+||||+|.++..+++..+. .+|++||+|+.+++.+++.+ . ++++++++|+.++
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~---------~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--G---------ELLELHAGDALTF 102 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--G---------GGEEEEESCGGGC
T ss_pred CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--C---------CCcEEEECChhcC
Confidence 45678999999999999999986432 45999999999999999884 1 4799999999886
No 284
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.07 E-value=2.1e-06 Score=79.86 Aligned_cols=154 Identities=12% Similarity=0.030 Sum_probs=96.1
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
+.+..+||+||||.|....++.+..+...+.++|+...+...+ .+- ...+.++..+..+. +...-.++++
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~p-----i~~----~~~g~~ii~~~~~~-dv~~l~~~~~ 157 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKP-----IMR----TTLGWNLIRFKDKT-DVFNMEVIPG 157 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCC-----CCC----CBTTGGGEEEECSC-CGGGSCCCCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccc-----ccc----ccCCCceEEeeCCc-chhhcCCCCc
Confidence 3456789999999999999888766667899999865421111 000 00122333333221 1122256899
Q ss_pred cEEEEcCCCCCCC--CCCcchHHHHHHHHhccCCC--cEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHC
Q 038076 218 AGIVVDLFSEGKV--LPQLEEVATWLKLKDRLMPN--GRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAF 293 (345)
Q Consensus 218 D~Ii~D~f~~~~~--p~~l~t~ef~~~~~~~L~pg--Gvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F 293 (345)
|+|++|.--.... .++..+.+.++.+.+.|+|| |.+++-+..+.. .....+++.|++.|
T Consensus 158 DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg-----------------~~~~~l~~~lk~~F 220 (282)
T 3gcz_A 158 DTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYT-----------------PLIMEELSRLQLKH 220 (282)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCS-----------------HHHHHHHHHHHHHH
T ss_pred CEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCC-----------------ccHHHHHHHHHHhc
Confidence 9999997443222 12333445577788999999 999999997533 24678899999999
Q ss_pred CCCEEEEEecCCC--CceEEEEeCCCCCc
Q 038076 294 PGKVSWKRMPERN--GENFLALTGLLPDL 320 (345)
Q Consensus 294 ~~~v~~~~~~~~~--~~n~v~~a~~~p~~ 320 (345)
. .|.+.+ |... ..-.++++....+.
T Consensus 221 ~-~V~~~K-PaSR~~S~E~Y~V~~~r~n~ 247 (282)
T 3gcz_A 221 G-GGLVRV-PLSRNSTHEMYWVSGTRTDV 247 (282)
T ss_dssp C-CEEECC-TTSCTTCCCEEEETTCCCCS
T ss_pred C-CEEEEc-CCCcccCcceeEEEecCCCc
Confidence 9 666443 3322 22345666655444
No 285
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.05 E-value=2.9e-05 Score=72.37 Aligned_cols=135 Identities=15% Similarity=0.043 Sum_probs=99.5
Q ss_pred hHHHHHhhccccCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccc
Q 038076 127 SYWDEFVSLPAIVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDV 206 (345)
Q Consensus 127 ~Y~~~~~~l~~~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa 206 (345)
.|.+.+..+ ++..+|++=.|+|.++.++++ ++.+++.||++|..++.-++++.. +++++++.+|+
T Consensus 82 ~yf~~l~~~----n~~~~LDlfaGSGaLgiEaLS--~~d~~vfvE~~~~a~~~L~~Nl~~---------~~~~~V~~~D~ 146 (283)
T 2oo3_A 82 EYISVIKQI----NLNSTLSYYPGSPYFAINQLR--SQDRLYLCELHPTEYNFLLKLPHF---------NKKVYVNHTDG 146 (283)
T ss_dssp HHHHHHHHH----SSSSSCCEEECHHHHHHHHSC--TTSEEEEECCSHHHHHHHTTSCCT---------TSCEEEECSCH
T ss_pred HHHHHHHHh----cCCCceeEeCCcHHHHHHHcC--CCCeEEEEeCCHHHHHHHHHHhCc---------CCcEEEEeCcH
Confidence 565544442 467899999999999999987 468999999999999999998852 46899999999
Q ss_pred cccccc---CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHh--ccCCCcEEEEEecCCCCCCccccCCCCCCCccchHH
Q 038076 207 FSPSED---ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKD--RLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWM 281 (345)
Q Consensus 207 ~~~l~~---~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~--~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~ 281 (345)
...+.. ..++||+|++|.+-.. .. .-.+.++.+.+ .+.|+|+++++....+. ..
T Consensus 147 ~~~L~~l~~~~~~fdLVfiDPPYe~---k~-~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~-----------------~~ 205 (283)
T 2oo3_A 147 VSKLNALLPPPEKRGLIFIDPSYER---KE-EYKEIPYAIKNAYSKFSTGLYCVWYPVVNK-----------------AW 205 (283)
T ss_dssp HHHHHHHCSCTTSCEEEEECCCCCS---TT-HHHHHHHHHHHHHHHCTTSEEEEEEEESSH-----------------HH
T ss_pred HHHHHHhcCCCCCccEEEECCCCCC---Cc-HHHHHHHHHHHhCccCCCeEEEEEEeccch-----------------HH
Confidence 998863 4468999999963221 11 11234444443 57899999999887664 45
Q ss_pred HHHHHHHHHHHCCCCEE
Q 038076 282 HNSAIRALSEAFPGKVS 298 (345)
Q Consensus 282 ~~~~~~~l~~~F~~~v~ 298 (345)
.+.+.+.|++.-. .+.
T Consensus 206 ~~~~~~~l~~~~~-~~l 221 (283)
T 2oo3_A 206 TEQFLRKMREISS-KSV 221 (283)
T ss_dssp HHHHHHHHHHHCS-SEE
T ss_pred HHHHHHHHHhcCC-CeE
Confidence 6788888876644 444
No 286
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.05 E-value=1.5e-05 Score=77.12 Aligned_cols=120 Identities=13% Similarity=0.069 Sum_probs=89.6
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhc---CCCCCCCCCCCCCcEEEEEcccccccccCCC
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYF---GLSDLEKPTATGGVLQVHIGDVFSPSEDASG 215 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f---~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~ 215 (345)
.+..+||++.+|.|.=+.+++...+...|+++|+++.-++..++.. +.... ....++++...|++.+-....+
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~----~~~~~v~v~~~D~~~~~~~~~~ 222 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEI----RDGNQVRVTSWDGRKWGELEGD 222 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTT----TTSSSEEEECCCGGGHHHHSTT
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhh----ccCCceEEEeCchhhcchhccc
Confidence 3567999999999988888887766678999999999888777654 22210 1235799999999998655678
Q ss_pred cccEEEEcCCCCCC-------CCCCc-------------chHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 216 RYAGIVVDLFSEGK-------VLPQL-------------EEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~-------~p~~l-------------~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
+||.|++|++..+. -|... ...+.+..+.+.|+|||+++...-+...
T Consensus 223 ~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~ 289 (359)
T 4fzv_A 223 TYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSH 289 (359)
T ss_dssp CEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCT
T ss_pred cCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCch
Confidence 99999999987541 11111 2356778888999999999987666655
No 287
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.99 E-value=1.2e-05 Score=84.50 Aligned_cols=117 Identities=10% Similarity=0.015 Sum_probs=79.0
Q ss_pred CCCCEEEEeecccHHHHHHHHhCC---CCEEEEEECCHHHHHHH--HHhcCCCCCCCCCCCCCcEEEEEcccccccccCC
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWP---SLKLEGWEIDEILIDKV--RDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDAS 214 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p---~~~v~~VEidp~vi~~A--~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~ 214 (345)
+..+|++.|||+|++...+.+..+ ..+++++||||..+++| +......... .......+..+|....-....
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~Ll---hGi~~~~I~~dD~L~~~~~~~ 397 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLV---SSNNAPTITGEDVCSLNPEDF 397 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTC---BTTBCCEEECCCGGGCCGGGG
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhh---cCCCcceEEecchhccccccc
Confidence 467899999999999999887765 36899999999999999 5544321110 011224566666665322245
Q ss_pred CcccEEEEcCCCCCCCC--------------------CC-----cchHHHHHHHHhccCCCcEEEEEecC
Q 038076 215 GRYAGIVVDLFSEGKVL--------------------PQ-----LEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~~~p--------------------~~-----l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
.+||+|+.+.+-..... .. -....|++.+.+.|+|||.+++-+..
T Consensus 398 ~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 398 ANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp TTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEET
T ss_pred CCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEECh
Confidence 78999999764321100 00 01345888999999999999877664
No 288
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.99 E-value=7.2e-06 Score=76.76 Aligned_cols=154 Identities=10% Similarity=-0.024 Sum_probs=95.7
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
+.+..+||+|||+.|..+..+.+..+...|+++|+..... . .+.. ....+.++.... +..+...-.++++
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~------~-~P~~--~~~~~~~iv~~~-~~~di~~l~~~~~ 148 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGH------E-KPIH--MQTLGWNIVKFK-DKSNVFTMPTEPS 148 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTS------C-CCCC--CCBTTGGGEEEE-CSCCTTTSCCCCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccc------c-cccc--ccccCCceEEee-cCceeeecCCCCc
Confidence 3567899999999999999999765667899999864321 0 0100 000112222222 2222222246899
Q ss_pred cEEEEcCCCCCCCC--CCcchHHHHHHHHhccCCC-cEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHCC
Q 038076 218 AGIVVDLFSEGKVL--PQLEEVATWLKLKDRLMPN-GRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAFP 294 (345)
Q Consensus 218 D~Ii~D~f~~~~~p--~~l~t~ef~~~~~~~L~pg-Gvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F~ 294 (345)
|+|++|..-..+.+ ++..+.+.++.+.+.|+|| |.|++-++.+.. .....++..|++.|.
T Consensus 149 DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG-----------------~~~~~ll~~lk~~F~ 211 (300)
T 3eld_A 149 DTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYH-----------------PDVIEKLERLQLRFG 211 (300)
T ss_dssp SEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTS-----------------HHHHHHHHHHHHHHC
T ss_pred CEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccC-----------------ccHHHHHHHHHHhCC
Confidence 99999974432221 2233445577888999999 999999987443 346789999999999
Q ss_pred CCEEEEEecCC--CCceEEEEeCCCCCc
Q 038076 295 GKVSWKRMPER--NGENFLALTGLLPDL 320 (345)
Q Consensus 295 ~~v~~~~~~~~--~~~n~v~~a~~~p~~ 320 (345)
.|.+.+ |.. ...-.+++++...+.
T Consensus 212 -~V~~~K-PaSR~~S~E~Y~V~~~r~n~ 237 (300)
T 3eld_A 212 -GGIVRV-PFSRNSTHEMYYISGARNNI 237 (300)
T ss_dssp -CEEECC-TTSCTTCCCEEEESSCCCCH
T ss_pred -cEEEEe-CCCCCCChHHeeeccCCCCc
Confidence 666432 322 222345566666544
No 289
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.93 E-value=2.5e-05 Score=72.89 Aligned_cols=74 Identities=23% Similarity=0.225 Sum_probs=62.4
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc---cccC-C
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP---SEDA-S 214 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~---l~~~-~ 214 (345)
.+...+++.+||+|..+..+++. +.+|+++|.||.+++.|++ +. ++|++++++|..++ ++.. .
T Consensus 21 ~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~----------~~rv~lv~~~f~~l~~~L~~~g~ 87 (285)
T 1wg8_A 21 RPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LH----------LPGLTVVQGNFRHLKRHLAALGV 87 (285)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TC----------CTTEEEEESCGGGHHHHHHHTTC
T ss_pred CCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hc----------cCCEEEEECCcchHHHHHHHcCC
Confidence 45678999999999999999986 6799999999999999999 63 25899999999986 4332 2
Q ss_pred CcccEEEEcCC
Q 038076 215 GRYAGIVVDLF 225 (345)
Q Consensus 215 ~~yD~Ii~D~f 225 (345)
+++|.|+.|+.
T Consensus 88 ~~vDgIL~DLG 98 (285)
T 1wg8_A 88 ERVDGILADLG 98 (285)
T ss_dssp SCEEEEEEECS
T ss_pred CCcCEEEeCCc
Confidence 57999999874
No 290
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.89 E-value=8.1e-06 Score=85.06 Aligned_cols=115 Identities=16% Similarity=0.153 Sum_probs=79.4
Q ss_pred CCCCEEEEeecccHHHHHHHHhC-------CC-----CEEEEEECCH---HHHHHHHHhcC------------CCCCC--
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLW-------PS-----LKLEGWEIDE---ILIDKVRDYFG------------LSDLE-- 190 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~-------p~-----~~v~~VEidp---~vi~~A~~~f~------------~~~~~-- 190 (345)
++-+|+++|.|+|.....+.+.+ |. .+++.+|..| +.++.|-..+. .+...
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 34589999999998766655432 22 6899999944 44443322211 11100
Q ss_pred --CCCCCC--CcEEEEEcccccccccC----CCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 191 --KPTATG--GVLQVHIGDVFSPSEDA----SGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 191 --~~~~~~--~rv~v~~gDa~~~l~~~----~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
+....+ -+++++.||+++.+... ..++|+|++|.|++.. .+++++.++|..+.+.++|||.+..
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~-np~~w~~~~~~~l~~~~~~g~~~~t 209 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAK-NPDMWNEQLFNAMARMTRPGGTFST 209 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC---CCTTCSHHHHHHHHHHEEEEEEEEE
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCC-ChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 000112 37889999999998764 4789999999999754 3568999999999999999999874
No 291
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.88 E-value=1.3e-05 Score=83.25 Aligned_cols=114 Identities=14% Similarity=0.151 Sum_probs=82.6
Q ss_pred CCEEEEeecccHHHHHHHHhC-------CC-----CEEEEEEC---CHHHHHHHHHhcC------------CCCCCC---
Q 038076 142 GPIAIYGLGGGTAAHLMLDLW-------PS-----LKLEGWEI---DEILIDKVRDYFG------------LSDLEK--- 191 (345)
Q Consensus 142 ~~VLiIG~G~G~~~~~l~~~~-------p~-----~~v~~VEi---dp~vi~~A~~~f~------------~~~~~~--- 191 (345)
-+|+++|.|+|.......+.+ |. .+++++|. +++.++.+-.++. .+....
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 589999999998766555432 21 57899999 8888875544321 111000
Q ss_pred -CCCC--CCcEEEEEcccccccccC----CCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 192 -PTAT--GGVLQVHIGDVFSPSEDA----SGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 192 -~~~~--~~rv~v~~gDa~~~l~~~----~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
.... .-+++++.||+++.+.+. ..++|+|++|.|++.. .+++++.++|+.+.+.++|||.++..
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~-np~~w~~~~~~~l~~~~~~g~~~~t~ 218 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAK-NPDMWTQNLFNAMARLARPGGTLATF 218 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGG-CGGGSCHHHHHHHHHHEEEEEEEEES
T ss_pred EEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcC-ChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 0011 356889999999998764 4789999999999743 46799999999999999999998754
No 292
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.67 E-value=4.2e-05 Score=70.18 Aligned_cols=150 Identities=13% Similarity=0.067 Sum_probs=92.8
Q ss_pred ccCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcE---EEEEc-cccccccc
Q 038076 137 AIVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVL---QVHIG-DVFSPSED 212 (345)
Q Consensus 137 ~~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv---~v~~g-Da~~~l~~ 212 (345)
.+.+..+|++|||+.|+...++.+..+-..|.+..|-.+. . -..... ..+.+ ++..+ |.++.
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~----~~P~~~------~~~Gv~~i~~~~G~Df~~~--- 135 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H----EEPMLM------QSYGWNIVTMKSGVDVFYK--- 135 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S----CCCCCC------CSTTGGGEEEECSCCGGGS---
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c----cCCCcc------cCCCceEEEeeccCCccCC---
Confidence 4456789999999999999988875222244454443321 0 001111 01344 44446 88772
Q ss_pred CCCcccEEEEcCCCCCCCC--CCcchHHHHHHHHhccCCCc-EEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHH
Q 038076 213 ASGRYAGIVVDLFSEGKVL--PQLEEVATWLKLKDRLMPNG-RFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRAL 289 (345)
Q Consensus 213 ~~~~yD~Ii~D~f~~~~~p--~~l~t~ef~~~~~~~L~pgG-vlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l 289 (345)
.+.++|+|++|.-.....+ ++.-+.+.++.+.+.|+||| .+++=+..... ..+.+.++.|
T Consensus 136 ~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg~~-----------------~~~~~~l~~l 198 (269)
T 2px2_A 136 PSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCPYM-----------------PKVIEKLESL 198 (269)
T ss_dssp CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTS-----------------HHHHHHHHHH
T ss_pred CCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCCCc-----------------hHHHHHHHHH
Confidence 3578999999974432211 22333346777889999999 99999887433 3467788899
Q ss_pred HHHCCCCEEEEEecCC--CCceEEEEeCCCCC
Q 038076 290 SEAFPGKVSWKRMPER--NGENFLALTGLLPD 319 (345)
Q Consensus 290 ~~~F~~~v~~~~~~~~--~~~n~v~~a~~~p~ 319 (345)
++.|. .|.+ +-|.. ...-+.+++....+
T Consensus 199 k~~F~-~vkv-k~paSR~~S~E~YlVa~~~~n 228 (269)
T 2px2_A 199 QRRFG-GGLV-RVPLSRNSNHEMYWVSGASGN 228 (269)
T ss_dssp HHHHC-CEEE-CCTTSCTTCCCEEEETTCCSC
T ss_pred HHHcC-CEEE-ECCCCCCCCccEEEEecccCc
Confidence 99999 5664 44432 23445666665544
No 293
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.58 E-value=0.00093 Score=60.63 Aligned_cols=152 Identities=13% Similarity=0.106 Sum_probs=99.8
Q ss_pred ccCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEc-ccccccccCCC
Q 038076 137 AIVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIG-DVFSPSEDASG 215 (345)
Q Consensus 137 ~~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~g-Da~~~l~~~~~ 215 (345)
.+.+..+|++|||+.|....++.......+|.++|+-+.=-+ .|.. ..++.-+.++++.+ |... + .+.
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe-------~P~~-~~s~gwn~v~fk~gvDv~~-~--~~~ 143 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHE-------EPVP-MSTYGWNIVKLMSGKDVFY-L--PPE 143 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSC-------CCCC-CCCTTTTSEEEECSCCGGG-C--CCC
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCcc-------Ccch-hhhcCcCceEEEeccceee-c--CCc
Confidence 345667999999999999998887766678999998543211 0100 01233456899988 8643 2 347
Q ss_pred cccEEEEcCCCCCCCC--CCcchHHHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHC
Q 038076 216 RYAGIVVDLFSEGKVL--PQLEEVATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAF 293 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~~p--~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F 293 (345)
++|.|+||.-.....| ++--|...++.+.+.|++ |-+++-+..+.. ....+.++.|+..|
T Consensus 144 ~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~-----------------p~v~e~l~~lq~~f 205 (267)
T 3p8z_A 144 KCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM-----------------PTVIEHLERLQRKH 205 (267)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS-----------------HHHHHHHHHHHHHH
T ss_pred cccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC-----------------hhHHHHHHHHHHHh
Confidence 8999999985532211 122345578888899998 889888887664 33558888999999
Q ss_pred CCCEEEEEecCCCCc--eEEEEeCCCCC
Q 038076 294 PGKVSWKRMPERNGE--NFLALTGLLPD 319 (345)
Q Consensus 294 ~~~v~~~~~~~~~~~--n~v~~a~~~p~ 319 (345)
.+ +.+ +.|...+. -+.++.+...+
T Consensus 206 gg-~lV-R~P~SRnsThEMY~Vsg~~~n 231 (267)
T 3p8z_A 206 GG-MLV-RNPLSRNSTHEMYWISNGTGN 231 (267)
T ss_dssp CC-EEE-CCTTSCTTCCCEEEESSCCCC
T ss_pred CC-EeE-eCCCCCCCcceEEEEecCCCc
Confidence 94 443 45643222 24555554444
No 294
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.49 E-value=0.00075 Score=63.09 Aligned_cols=131 Identities=17% Similarity=0.139 Sum_probs=85.2
Q ss_pred hHHHHHhhcc----ccCCCCCEEEEee------cccHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHhcCCCCCCCCCCC
Q 038076 127 SYWDEFVSLP----AIVPNGPIAIYGL------GGGTAAHLMLDLWPS-LKLEGWEIDEILIDKVRDYFGLSDLEKPTAT 195 (345)
Q Consensus 127 ~Y~~~~~~l~----~~~~p~~VLiIG~------G~G~~~~~l~~~~p~-~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~ 195 (345)
-|+|...-+- ..+...+||++|+ -.|+. .+.+..|. ..|+.|||.|-..
T Consensus 92 kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s------------------ 151 (344)
T 3r24_A 92 KYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS------------------ 151 (344)
T ss_dssp HHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC------------------
T ss_pred HHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc------------------
Confidence 3666543331 2245789999996 45552 33444665 6999999976431
Q ss_pred CCcEEEEEcccccccccCCCcccEEEEcCCCCCC-C---C---CCcchHHHHHHHHhccCCCcEEEEEecCCCCCCcccc
Q 038076 196 GGVLQVHIGDVFSPSEDASGRYAGIVVDLFSEGK-V---L---PQLEEVATWLKLKDRLMPNGRFMVNCGGIDGVSDMTY 268 (345)
Q Consensus 196 ~~rv~v~~gDa~~~l~~~~~~yD~Ii~D~f~~~~-~---p---~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~ 268 (345)
++.+ .+.||..+.. ...+||+|+.|.....+ . + ........++-+++.|+|||.|++=+.....
T Consensus 152 da~~-~IqGD~~~~~--~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg------ 222 (344)
T 3r24_A 152 DADS-TLIGDCATVH--TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW------ 222 (344)
T ss_dssp SSSE-EEESCGGGEE--ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC------
T ss_pred CCCe-EEEccccccc--cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC------
Confidence 1223 4999977643 36889999999865421 1 1 1123456677889999999999998875543
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHCCCCEEEEE
Q 038076 269 GAARPKSMNDVWMHNSAIRALSEAFPGKVSWKR 301 (345)
Q Consensus 269 g~~~~~~~d~~~~~~~~~~~l~~~F~~~v~~~~ 301 (345)
.+.+..+++.|. .|..++
T Consensus 223 --------------~~~L~~lrk~F~-~VK~fK 240 (344)
T 3r24_A 223 --------------NADLYKLMGHFS-WWTAFV 240 (344)
T ss_dssp --------------CHHHHHHHTTEE-EEEEEE
T ss_pred --------------HHHHHHHHhhCC-eEEEEC
Confidence 123455677998 676665
No 295
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.47 E-value=0.00071 Score=63.21 Aligned_cols=152 Identities=14% Similarity=0.096 Sum_probs=97.4
Q ss_pred cCCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEc-ccccccccCCCc
Q 038076 138 IVPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIG-DVFSPSEDASGR 216 (345)
Q Consensus 138 ~~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~g-Da~~~l~~~~~~ 216 (345)
+.+..+|++|||+.|....+++......+|.++|+-..=- ..|... ..+.-+-++++.+ |.+.. .+.+
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~h-------e~P~~~-~ql~w~lV~~~~~~Dv~~l---~~~~ 160 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGH-------EEPQLV-QSYGWNIVTMKSGVDVFYR---PSEC 160 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTS-------CCCCCC-CBTTGGGEEEECSCCTTSS---CCCC
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCc-------cCcchh-hhcCCcceEEEeccCHhhC---CCCC
Confidence 3456799999999999999888766667899999844311 000000 0111234777777 76543 3377
Q ss_pred ccEEEEcCCCCCCCC--CCcchHHHHHHHHhccCCC-cEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHC
Q 038076 217 YAGIVVDLFSEGKVL--PQLEEVATWLKLKDRLMPN-GRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAF 293 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p--~~l~t~ef~~~~~~~L~pg-Gvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F 293 (345)
+|+|+||+-.....| ++--|...++.+.+.|++| |-+++-+..+-. ....+.+..|+..|
T Consensus 161 ~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~-----------------~~v~e~l~~lq~~f 223 (321)
T 3lkz_A 161 CDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYM-----------------PKVIEKMELLQRRY 223 (321)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTS-----------------HHHHHHHHHHHHHH
T ss_pred CCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCC-----------------hHHHHHHHHHHHHh
Confidence 999999997432222 1223455778888999999 999998887754 23558889999999
Q ss_pred CCCEEEEEecCCCCc--eEEEEeCCCCC
Q 038076 294 PGKVSWKRMPERNGE--NFLALTGLLPD 319 (345)
Q Consensus 294 ~~~v~~~~~~~~~~~--n~v~~a~~~p~ 319 (345)
.+ +.+ +.|...+. -+..+.+...+
T Consensus 224 gg-~lv-r~P~SRnst~EmY~vsGa~gN 249 (321)
T 3lkz_A 224 GG-GLV-RNPLSRNSTHEMYWVSRASGN 249 (321)
T ss_dssp CC-EEE-CCTTSCTTCCCEEEETTCCSC
T ss_pred CC-EeE-eCCCCCCCcceEEEEecCCCC
Confidence 94 443 45643322 24555555544
No 296
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.37 E-value=0.0012 Score=66.75 Aligned_cols=113 Identities=12% Similarity=-0.013 Sum_probs=76.4
Q ss_pred CCCCEEEEeecccHHHHHHHHhC----C---------CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccc
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLW----P---------SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDV 206 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~----p---------~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa 206 (345)
+..+|++-.||+|++...+.++. . ...+.++|+|+....+|+-++-+.. ...-++..+|.
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg-------~~~~~I~~~dt 289 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHG-------LEYPRIDPENS 289 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHT-------CSCCEEECSCT
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcC-------Ccccccccccc
Confidence 45689999999999987665431 1 2579999999999999997654332 12346788888
Q ss_pred cccccc---CCCcccEEEEcCCCCCC------------CCCCcchHHHHHHHHhccC-------CCcEEEEEecC
Q 038076 207 FSPSED---ASGRYAGIVVDLFSEGK------------VLPQLEEVATWLKLKDRLM-------PNGRFMVNCGG 259 (345)
Q Consensus 207 ~~~l~~---~~~~yD~Ii~D~f~~~~------------~p~~l~t~ef~~~~~~~L~-------pgGvlvvn~~~ 259 (345)
..+-.. ...+||+|+.+.+-+.. .+..-...-|++.+.+.|+ |||.+++-+..
T Consensus 290 L~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~ 364 (530)
T 3ufb_A 290 LRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPN 364 (530)
T ss_dssp TCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEH
T ss_pred ccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecc
Confidence 764211 24589999997644321 1111233457888888886 79998876654
No 297
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.35 E-value=0.00023 Score=68.58 Aligned_cols=59 Identities=15% Similarity=0.098 Sum_probs=50.7
Q ss_pred CCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc
Q 038076 141 NGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP 209 (345)
Q Consensus 141 p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~ 209 (345)
...|++||.|.|.+++.|++.....++++||+|+.+++.-++.+. .++++++++|+.++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~----------~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFE----------GSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTT----------TSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhcc----------CCCEEEEECCccch
Confidence 367999999999999999986444689999999999999888762 35899999999876
No 298
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.06 E-value=0.0058 Score=59.37 Aligned_cols=113 Identities=9% Similarity=-0.075 Sum_probs=77.1
Q ss_pred CCCEEEEeecccHHHHHHHHh-----------------CCCCEEEEEECC-----------HHHHHHHHHhcCCCCCCCC
Q 038076 141 NGPIAIYGLGGGTAAHLMLDL-----------------WPSLKLEGWEID-----------EILIDKVRDYFGLSDLEKP 192 (345)
Q Consensus 141 p~~VLiIG~G~G~~~~~l~~~-----------------~p~~~v~~VEid-----------p~vi~~A~~~f~~~~~~~~ 192 (345)
+-+|+++||++|..+..+... .|..+|...|+- |...+-.++..+.
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~------ 126 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGR------ 126 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCC------
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccC------
Confidence 567999999999877765543 366888899987 7766665554331
Q ss_pred CCCCCcEEEEEccccccccc--CCCcccEEEEcCCCCC--CCCCCcch--------------------------------
Q 038076 193 TATGGVLQVHIGDVFSPSED--ASGRYAGIVVDLFSEG--KVLPQLEE-------------------------------- 236 (345)
Q Consensus 193 ~~~~~rv~v~~gDa~~~l~~--~~~~yD~Ii~D~f~~~--~~p~~l~t-------------------------------- 236 (345)
..+-.++.|.+.+|-.+ +.+++|+|+...--++ .+|..+..
T Consensus 127 ---~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D 203 (384)
T 2efj_A 127 ---KIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKD 203 (384)
T ss_dssp ---CTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHH
T ss_pred ---CCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHH
Confidence 12346778888887544 6789999998654443 13333221
Q ss_pred -HHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 237 -VATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 237 -~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
..|++..++-|+|||.+++.+.+...
T Consensus 204 ~~~FL~~Ra~eL~pGG~mvl~~~gr~~ 230 (384)
T 2efj_A 204 FTTFLRIHSEELISRGRMLLTFICKED 230 (384)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECCCT
T ss_pred HHHHHHHHHHHhccCCeEEEEEecCCC
Confidence 12366778899999999999987765
No 299
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.04 E-value=0.0009 Score=63.82 Aligned_cols=75 Identities=21% Similarity=0.280 Sum_probs=60.6
Q ss_pred CCCCCEEEEeecccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccc---cC-
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLW-PSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSE---DA- 213 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~-p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~---~~- 213 (345)
.+...+++..+|+|..+..+++.. |..+|+++|.||+.++.|+ .+ . ++|+++++++..++.+ ..
T Consensus 56 ~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL--~--------~~Rv~lv~~nF~~l~~~L~~~g 124 (347)
T 3tka_A 56 RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI--D--------DPRFSIIHGPFSALGEYVAERD 124 (347)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC--C--------CTTEEEEESCGGGHHHHHHHTT
T ss_pred CCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh--c--------CCcEEEEeCCHHHHHHHHHhcC
Confidence 345679999999999999999874 6789999999999999995 33 1 4689999999888643 21
Q ss_pred -CCcccEEEEcC
Q 038076 214 -SGRYAGIVVDL 224 (345)
Q Consensus 214 -~~~yD~Ii~D~ 224 (345)
.+++|.|+.|+
T Consensus 125 ~~~~vDgILfDL 136 (347)
T 3tka_A 125 LIGKIDGILLDL 136 (347)
T ss_dssp CTTCEEEEEEEC
T ss_pred CCCcccEEEECC
Confidence 23699999987
No 300
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=96.77 E-value=0.003 Score=61.06 Aligned_cols=100 Identities=9% Similarity=-0.088 Sum_probs=66.0
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+..+|++||++.|..+..+.++ +.+|++||+-|.--.+ . .+++++++.+|+..+.. ..+++|
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~~~l-~-------------~~~~V~~~~~d~~~~~~-~~~~~D 272 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMAQSL-M-------------DTGQVTWLREDGFKFRP-TRSNIS 272 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCCHHH-H-------------TTTCEEEECSCTTTCCC-CSSCEE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcChhh-c-------------cCCCeEEEeCccccccC-CCCCcC
Confidence 45678999999999999999875 6799999975421111 1 15789999999999753 356899
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
+|++|.-.. .--..+........+..++ .++|+--+.
T Consensus 273 ~vvsDm~~~-----p~~~~~l~~~wl~~~~~~~-aI~~lKL~m 309 (375)
T 4auk_A 273 WMVCDMVEK-----PAKVAALMAQWLVNGWCRE-TIFNLKLPM 309 (375)
T ss_dssp EEEECCSSC-----HHHHHHHHHHHHHTTSCSE-EEEEEECCS
T ss_pred EEEEcCCCC-----hHHhHHHHHHHHhccccce-EEEEEEecc
Confidence 999997332 1122333333333333334 556764433
No 301
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=96.65 E-value=0.0013 Score=55.51 Aligned_cols=79 Identities=14% Similarity=0.093 Sum_probs=52.0
Q ss_pred CCCCCEEEEeeccc-HHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 139 VPNGPIAIYGLGGG-TAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 139 ~~p~~VLiIG~G~G-~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
.++.+||+||||.| ..+..|.+. .+..|+++||+|.-++ ++.+|..+-....-+.|
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~-~g~~V~atDInp~Av~----------------------~v~dDiF~P~~~~Y~~~ 90 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKH-SKVDLVLTDIKPSHGG----------------------IVRDDITSPRMEIYRGA 90 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHH-SCCEEEEECSSCSSTT----------------------EECCCSSSCCHHHHTTE
T ss_pred CCCCcEEEEccCCChHHHHHHHHh-CCCeEEEEECCccccc----------------------eEEccCCCCcccccCCc
Confidence 34679999999999 599888864 3689999999886555 44456655322222589
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhcc
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRL 247 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L 247 (345)
|+|.. -.+|+++ ...+.++.+..
T Consensus 91 DLIYs-----irPP~El--~~~i~~lA~~v 113 (153)
T 2k4m_A 91 ALIYS-----IRPPAEI--HSSLMRVADAV 113 (153)
T ss_dssp EEEEE-----ESCCTTT--HHHHHHHHHHH
T ss_pred CEEEE-----cCCCHHH--HHHHHHHHHHc
Confidence 99963 1334444 23445555444
No 302
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.36 E-value=0.0095 Score=57.64 Aligned_cols=122 Identities=10% Similarity=-0.056 Sum_probs=72.8
Q ss_pred CCCEEEEeecccHHHHHH--------HHh-------CCCCEEEEEECCHHHHHHHHHhcCC-CC-C---CCCCCCCCcEE
Q 038076 141 NGPIAIYGLGGGTAAHLM--------LDL-------WPSLKLEGWEIDEILIDKVRDYFGL-SD-L---EKPTATGGVLQ 200 (345)
Q Consensus 141 p~~VLiIG~G~G~~~~~l--------~~~-------~p~~~v~~VEidp~vi~~A~~~f~~-~~-~---~~~~~~~~rv~ 200 (345)
+-+|+++|||+|..+..+ .+. .|..+|...|+-..-...-=+.+.. .. . .+......+-.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 568999999999877765 222 2678888888866554332222211 00 0 00000011223
Q ss_pred EEEccccccccc--CCCcccEEEEcCCCCC--CCCCCcc--------------------------------hHHHHHHHH
Q 038076 201 VHIGDVFSPSED--ASGRYAGIVVDLFSEG--KVLPQLE--------------------------------EVATWLKLK 244 (345)
Q Consensus 201 v~~gDa~~~l~~--~~~~yD~Ii~D~f~~~--~~p~~l~--------------------------------t~ef~~~~~ 244 (345)
++.+.+.+|-.+ +++++|+|+...--++ .+|..+. -..|++..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777766433 5789999998654443 1232221 123677789
Q ss_pred hccCCCcEEEEEecCCCC
Q 038076 245 DRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 245 ~~L~pgGvlvvn~~~~~~ 262 (345)
+-|+|||.+++.+.+...
T Consensus 213 ~eL~pGG~mvl~~~gr~~ 230 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRTS 230 (374)
T ss_dssp HHEEEEEEEEEEEEECCC
T ss_pred HHhCCCCEEEEEEecCCC
Confidence 999999999999886654
No 303
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.23 E-value=0.03 Score=51.32 Aligned_cols=138 Identities=14% Similarity=0.043 Sum_probs=86.1
Q ss_pred CCCCCEEEEeecccHHHHHHHHh-------CCCCEEEEEE-----CCHH-----------------------HHHHH--H
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDL-------WPSLKLEGWE-----IDEI-----------------------LIDKV--R 181 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~-------~p~~~v~~VE-----idp~-----------------------vi~~A--~ 181 (345)
.-|..|+++|+--|.....+.+. .+..+|.+.| .++. +-++. +
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 35789999999877666554431 3568899998 3321 11111 1
Q ss_pred HhcCCCCCCCCCCCCCcEEEEEccccccccc-----CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 182 DYFGLSDLEKPTATGGVLQVHIGDVFSPSED-----ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 182 ~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~-----~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
+.+..-+ ..+++++++.||+.+.|.. ...++|+|++|+.. + -.+...++.+..+|+|||++++.
T Consensus 148 ~~~~~~g-----~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y----~~t~~~le~~~p~l~~GGvIv~D 216 (257)
T 3tos_A 148 ECSDFFG-----HVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--Y----EPTKAVLEAIRPYLTKGSIVAFD 216 (257)
T ss_dssp HTTSTTT-----TSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--H----HHHHHHHHHHGGGEEEEEEEEES
T ss_pred hhhhhcC-----CCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--c----chHHHHHHHHHHHhCCCcEEEEc
Confidence 1221101 1247899999999988754 34579999999732 1 13567899999999999999975
Q ss_pred ecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHCCC-CEEEEEecCCC
Q 038076 257 CGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAFPG-KVSWKRMPERN 306 (345)
Q Consensus 257 ~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F~~-~v~~~~~~~~~ 306 (345)
=..... | ..+.+++.+.+.. .+.+.++|...
T Consensus 217 D~~~~~--------w-----------~G~~~A~~ef~~~~~~~i~~~p~~~ 248 (257)
T 3tos_A 217 ELDNPK--------W-----------PGENIAMRKVLGLDHAPLRLLPGRP 248 (257)
T ss_dssp STTCTT--------C-----------THHHHHHHHHTCTTSSCCEECTTCS
T ss_pred CCCCCC--------C-----------hHHHHHHHHHHhhCCCeEEEccCCC
Confidence 443221 1 1455666777653 23444666443
No 304
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.96 E-value=0.0063 Score=56.65 Aligned_cols=44 Identities=14% Similarity=0.032 Sum_probs=39.1
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcC
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFG 185 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~ 185 (345)
+...||+++||+|+++..+.+. +.+++++|+||.++++|++.+.
T Consensus 235 ~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a~~r~~ 278 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLAKERFA 278 (297)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHH
Confidence 5578999999999999998874 5799999999999999998874
No 305
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.93 E-value=0.0068 Score=57.09 Aligned_cols=93 Identities=18% Similarity=0.249 Sum_probs=64.8
Q ss_pred CCCCCEEEEeecc-cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE---cccccccccCC
Q 038076 139 VPNGPIAIYGLGG-GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI---GDVFSPSEDAS 214 (345)
Q Consensus 139 ~~p~~VLiIG~G~-G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~---gDa~~~l~~~~ 214 (345)
.+..+||++|+|+ |..+.++++.. +.+|++++.+++-.+.+++. +.. .++. .|..+.+....
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l-Ga~------------~~i~~~~~~~~~~~~~~~ 230 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARRL-GAE------------VAVNARDTDPAAWLQKEI 230 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT-TCS------------EEEETTTSCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHc-CCC------------EEEeCCCcCHHHHHHHhC
Confidence 4568899999875 88888888775 46999999999999999874 321 1221 12222232223
Q ss_pred CcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 215 GRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
..+|+|+...- ..+.++.+.+.|+++|.++.
T Consensus 231 g~~d~vid~~g----------~~~~~~~~~~~l~~~G~iv~ 261 (340)
T 3s2e_A 231 GGAHGVLVTAV----------SPKAFSQAIGMVRRGGTIAL 261 (340)
T ss_dssp SSEEEEEESSC----------CHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCEEEEeCC----------CHHHHHHHHHHhccCCEEEE
Confidence 47999985432 24578889999999999874
No 306
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.92 E-value=0.033 Score=52.82 Aligned_cols=96 Identities=15% Similarity=0.059 Sum_probs=65.2
Q ss_pred CCCCCEEEEeecc-cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE-----ccccccccc
Q 038076 139 VPNGPIAIYGLGG-GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI-----GDVFSPSED 212 (345)
Q Consensus 139 ~~p~~VLiIG~G~-G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~-----gDa~~~l~~ 212 (345)
.+..+||++|+|+ |.++.++++.....+|.+++.+++-.+.+++. . .. -+.... .|..+-+..
T Consensus 178 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~-~~---------~~~~~~~~~~~~~~~~~v~~ 246 (363)
T 3m6i_A 178 RLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-C-PE---------VVTHKVERLSAEESAKKIVE 246 (363)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-C-TT---------CEEEECCSCCHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-c-hh---------cccccccccchHHHHHHHHH
Confidence 4678999999864 77777888776444599999999999999987 4 11 122221 122222222
Q ss_pred --CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 213 --ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 213 --~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
..+.+|+|+--. . ..+.++.+.+.|+++|.+++
T Consensus 247 ~t~g~g~Dvvid~~-g---------~~~~~~~~~~~l~~~G~iv~ 281 (363)
T 3m6i_A 247 SFGGIEPAVALECT-G---------VESSIAAAIWAVKFGGKVFV 281 (363)
T ss_dssp HTSSCCCSEEEECS-C---------CHHHHHHHHHHSCTTCEEEE
T ss_pred HhCCCCCCEEEECC-C---------ChHHHHHHHHHhcCCCEEEE
Confidence 256899998422 1 13468888999999999874
No 307
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=95.82 E-value=0.013 Score=56.30 Aligned_cols=117 Identities=12% Similarity=-0.048 Sum_probs=77.8
Q ss_pred CCCCEEEEeecccHHHHH--------HHH--------hCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE
Q 038076 140 PNGPIAIYGLGGGTAAHL--------MLD--------LWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI 203 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~--------l~~--------~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~ 203 (345)
++-+|+++||++|..+.. +.+ ..|..+|...|+-.......-+.+.. .. ...+-.++.
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~--~~----~~~~~~f~~ 124 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPI--EN----DVDGVCFIN 124 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTT--SC----SCTTCEEEE
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcch--hc----ccCCCEEEE
Confidence 346799999999954433 222 14668999999988888877665431 10 011346778
Q ss_pred ccccccccc--CCCcccEEEEcCCCCC--CCCCC--------------------cch-------HHHHHHHHhccCCCcE
Q 038076 204 GDVFSPSED--ASGRYAGIVVDLFSEG--KVLPQ--------------------LEE-------VATWLKLKDRLMPNGR 252 (345)
Q Consensus 204 gDa~~~l~~--~~~~yD~Ii~D~f~~~--~~p~~--------------------l~t-------~ef~~~~~~~L~pgGv 252 (345)
|.+.+|-.+ +.+++|+|+...--++ .+|.. .|. ..|++..++-|+|||.
T Consensus 125 gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~ 204 (359)
T 1m6e_X 125 GVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGR 204 (359)
T ss_dssp EEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCE
T ss_pred ecchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence 888887544 6789999997554332 12222 111 2457788899999999
Q ss_pred EEEEecCCCC
Q 038076 253 FMVNCGGIDG 262 (345)
Q Consensus 253 lvvn~~~~~~ 262 (345)
+++.+.+...
T Consensus 205 mvl~~~gr~~ 214 (359)
T 1m6e_X 205 MVLTILGRRS 214 (359)
T ss_dssp EEEEEEECSS
T ss_pred EEEEEecCCC
Confidence 9999887654
No 308
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.75 E-value=0.016 Score=55.17 Aligned_cols=94 Identities=17% Similarity=0.193 Sum_probs=63.0
Q ss_pred CCCCCEEEEeecc-cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEc---cccccccc-C
Q 038076 139 VPNGPIAIYGLGG-GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIG---DVFSPSED-A 213 (345)
Q Consensus 139 ~~p~~VLiIG~G~-G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~g---Da~~~l~~-~ 213 (345)
.+..+||++|+|+ |..+.++++.....+|+++|.+++-.+.++++ +.. .++.. |..+-+.. .
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~------------~vi~~~~~~~~~~~~~~~ 255 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL-GAT------------HVINSKTQDPVAAIKEIT 255 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH-TCS------------EEEETTTSCHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc-CCC------------EEecCCccCHHHHHHHhc
Confidence 4568899999875 77777777765434799999999999999875 321 12221 22222221 2
Q ss_pred CCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 214 SGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 214 ~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
++.+|+||--. . ..+.++.+.+.|+++|.+++
T Consensus 256 ~gg~D~vid~~-g---------~~~~~~~~~~~l~~~G~iv~ 287 (371)
T 1f8f_A 256 DGGVNFALEST-G---------SPEILKQGVDALGILGKIAV 287 (371)
T ss_dssp TSCEEEEEECS-C---------CHHHHHHHHHTEEEEEEEEE
T ss_pred CCCCcEEEECC-C---------CHHHHHHHHHHHhcCCEEEE
Confidence 33799998422 1 13568889999999999875
No 309
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.69 E-value=0.063 Score=43.77 Aligned_cols=94 Identities=12% Similarity=0.143 Sum_probs=61.3
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc--ccc-CCC
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP--SED-ASG 215 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~--l~~-~~~ 215 (345)
..+|+++|+| |..+++.|.+ .+.+|+++|.|++.++.+++. .+.++.+|+.+- ++. .-+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~--~g~~v~vid~~~~~~~~~~~~--------------g~~~i~gd~~~~~~l~~a~i~ 70 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLA--SDIPLVVIETSRTRVDELRER--------------GVRAVLGNAANEEIMQLAHLE 70 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH--TTCCEEEEESCHHHHHHHHHT--------------TCEEEESCTTSHHHHHHTTGG
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCHHHHHHHHHc--------------CCCEEECCCCCHHHHHhcCcc
Confidence 4689999998 3455555554 357899999999999887762 256788998653 332 236
Q ss_pred cccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEe
Q 038076 216 RYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
..|+|++-..+. ......-...+.+.|+..++.-.
T Consensus 71 ~ad~vi~~~~~~-------~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 71 CAKWLILTIPNG-------YEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp GCSEEEECCSCH-------HHHHHHHHHHHHHCSSSEEEEEE
T ss_pred cCCEEEEECCCh-------HHHHHHHHHHHHHCCCCeEEEEE
Confidence 799999743321 11222334556678887766544
No 310
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.67 E-value=0.053 Score=51.55 Aligned_cols=123 Identities=10% Similarity=0.054 Sum_probs=80.4
Q ss_pred CCCEEEEeecccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccC--CCcc
Q 038076 141 NGPIAIYGLGGGTAAHLMLDLWP-SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDA--SGRY 217 (345)
Q Consensus 141 p~~VLiIG~G~G~~~~~l~~~~p-~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~--~~~y 217 (345)
+.+|+++-||.|.+...+.+.-- -..+.++|+|+..++..+.++.. ..++.+|..++.... ...+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~------------~~~~~~Di~~~~~~~~~~~~~ 69 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH------------TQLLAKTIEGITLEEFDRLSF 69 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------------SCEECSCGGGCCHHHHHHHCC
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc------------cccccCCHHHccHhHcCcCCc
Confidence 45799999999999998887521 24799999999999999998851 236789998874321 1269
Q ss_pred cEEEEcCCCCCC-CC---CCc------chHHHHHHHHhccC--CCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHH
Q 038076 218 AGIVVDLFSEGK-VL---PQL------EEVATWLKLKDRLM--PNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSA 285 (345)
Q Consensus 218 D~Ii~D~f~~~~-~p---~~l------~t~ef~~~~~~~L~--pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~ 285 (345)
|+|+.+.+..+. .. ..+ .-.++++ +.+.++ |.=+++=|+.+-... ..++.+
T Consensus 70 D~l~~gpPCq~fS~ag~~~g~~d~r~~l~~~~~~-~i~~~~~~P~~~~~ENV~~l~~~----------------~~~~~i 132 (343)
T 1g55_A 70 DMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILD-ILPRLQKLPKYILLENVKGFEVS----------------STRDLL 132 (343)
T ss_dssp SEEEECCC------------------CHHHHHHH-HGGGCSSCCSEEEEEEETTGGGS----------------HHHHHH
T ss_pred CEEEEcCCCcchhhcCCcCCccCccchHHHHHHH-HHHHhcCCCCEEEEeCCccccCH----------------HHHHHH
Confidence 999998754321 00 001 1123333 445677 888888788864321 346667
Q ss_pred HHHHHHH
Q 038076 286 IRALSEA 292 (345)
Q Consensus 286 ~~~l~~~ 292 (345)
++.|.+.
T Consensus 133 ~~~l~~~ 139 (343)
T 1g55_A 133 IQTIENC 139 (343)
T ss_dssp HHHHHHT
T ss_pred HHHHHHC
Confidence 7777653
No 311
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.56 E-value=0.19 Score=47.50 Aligned_cols=123 Identities=11% Similarity=-0.051 Sum_probs=83.9
Q ss_pred CCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccEE
Q 038076 141 NGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAGI 220 (345)
Q Consensus 141 p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~I 220 (345)
..+++++.+|+|.+...+.+. +-..+.++|+|+..++..+.++... . .+|..++....-..+|+|
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G~~~v~~~e~d~~a~~t~~~N~~~~---------~-----~~Di~~~~~~~~~~~D~l 75 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-GAECVYSNEWDKYAQEVYEMNFGEK---------P-----EGDITQVNEKTIPDHDIL 75 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-TCEEEEEECCCHHHHHHHHHHHSCC---------C-----BSCGGGSCGGGSCCCSEE
T ss_pred CCcEEEECCCcCHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHHcCCC---------C-----cCCHHHcCHhhCCCCCEE
Confidence 457999999999999988764 3456888999999999999988521 1 589888765444569999
Q ss_pred EEcCCCCCC--------C--CCCcchHHHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHH
Q 038076 221 VVDLFSEGK--------V--LPQLEEVATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALS 290 (345)
Q Consensus 221 i~D~f~~~~--------~--p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~ 290 (345)
+.+.+..+. . +..-.-.++++.+ +.++|.=+++=|+.+-... ++...++.+++.|.
T Consensus 76 ~~gpPCQ~fS~ag~~~g~~d~r~~L~~~~~r~i-~~~~P~~~~~ENV~gl~~~-------------~~~~~~~~i~~~l~ 141 (327)
T 2c7p_A 76 CAGFPCQAFSISGKQKGFEDSRGTLFFDIARIV-REKKPKVVFMENVKNFASH-------------DNGNTLEVVKNTMN 141 (327)
T ss_dssp EEECCCTTTCTTSCCCGGGSTTSCHHHHHHHHH-HHHCCSEEEEEEEGGGGTG-------------GGGHHHHHHHHHHH
T ss_pred EECCCCCCcchhcccCCCcchhhHHHHHHHHHH-HhccCcEEEEeCcHHHHhc-------------cccHHHHHHHHHHH
Confidence 987655321 0 1111123445444 4579998888899865431 11245677777776
Q ss_pred HH
Q 038076 291 EA 292 (345)
Q Consensus 291 ~~ 292 (345)
+.
T Consensus 142 ~~ 143 (327)
T 2c7p_A 142 EL 143 (327)
T ss_dssp HT
T ss_pred hC
Confidence 54
No 312
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.51 E-value=0.011 Score=55.90 Aligned_cols=94 Identities=13% Similarity=0.149 Sum_probs=62.8
Q ss_pred CCCCCEEEEeecc-cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE---ccccccccc--
Q 038076 139 VPNGPIAIYGLGG-GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI---GDVFSPSED-- 212 (345)
Q Consensus 139 ~~p~~VLiIG~G~-G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~---gDa~~~l~~-- 212 (345)
.+..+||++|+|+ |.++.++++.....+|.++|.+++-.+.+++. +.. .++. .|..+.+.+
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga~------------~vi~~~~~~~~~~v~~~t 231 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY-GAT------------DIINYKNGDIVEQILKAT 231 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH-TCC------------EEECGGGSCHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh-CCc------------eEEcCCCcCHHHHHHHHc
Confidence 4678999999864 67777777765434899999999999999885 322 1221 122222221
Q ss_pred CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 213 ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 213 ~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
....+|+|+- .... .+.++.+.+.|+++|.++.
T Consensus 232 ~g~g~D~v~d-~~g~---------~~~~~~~~~~l~~~G~~v~ 264 (352)
T 3fpc_A 232 DGKGVDKVVI-AGGD---------VHTFAQAVKMIKPGSDIGN 264 (352)
T ss_dssp TTCCEEEEEE-CSSC---------TTHHHHHHHHEEEEEEEEE
T ss_pred CCCCCCEEEE-CCCC---------hHHHHHHHHHHhcCCEEEE
Confidence 2347999984 3221 1367888899999999874
No 313
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.38 E-value=0.035 Score=52.08 Aligned_cols=98 Identities=13% Similarity=0.105 Sum_probs=64.6
Q ss_pred CCCCCEEEEeecc-cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc--CCC
Q 038076 139 VPNGPIAIYGLGG-GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED--ASG 215 (345)
Q Consensus 139 ~~p~~VLiIG~G~-G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~--~~~ 215 (345)
.+..+||++|+|+ |.++..+++...+.+|++++.+++-.+.+++... . .-+.....|..+.+.. ...
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga-~---------~~i~~~~~~~~~~v~~~t~g~ 231 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGA-D---------VTINSGDVNPVDEIKKITGGL 231 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTC-S---------EEEEC-CCCHHHHHHHHTTSS
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCC-e---------EEEeCCCCCHHHHhhhhcCCC
Confidence 3567899999875 3555566666667999999999999999887543 1 1122222333333322 345
Q ss_pred cccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 216 RYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
.+|.++.+... .+.+..+.+.|+++|.+++-
T Consensus 232 g~d~~~~~~~~----------~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 232 GVQSAIVCAVA----------RIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp CEEEEEECCSC----------HHHHHHHHHTEEEEEEEEEC
T ss_pred CceEEEEeccC----------cchhheeheeecCCceEEEE
Confidence 67877765422 45788888999999998753
No 314
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.31 E-value=0.03 Score=53.08 Aligned_cols=94 Identities=11% Similarity=0.037 Sum_probs=62.5
Q ss_pred CCCCCEEEEeecc-cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcc---cccc---cc
Q 038076 139 VPNGPIAIYGLGG-GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGD---VFSP---SE 211 (345)
Q Consensus 139 ~~p~~VLiIG~G~-G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gD---a~~~---l~ 211 (345)
.+..+||++|+|+ |..+.++++.....+|++++.+++-.+.++++ +.. .++..+ ..++ +.
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~------------~vi~~~~~~~~~~~~~i~ 236 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI-GAD------------LVLQISKESPQEIARKVE 236 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-TCS------------EEEECSSCCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-CCC------------EEEcCcccccchHHHHHH
Confidence 4567899999874 77777887776434999999999999999864 321 122211 1111 11
Q ss_pred c-CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 212 D-ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 212 ~-~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
. .++.+|+||--. . ..+.++.+.+.|+++|.++.
T Consensus 237 ~~~~~g~D~vid~~-g---------~~~~~~~~~~~l~~~G~iv~ 271 (356)
T 1pl8_A 237 GQLGCKPEVTIECT-G---------AEASIQAGIYATRSGGTLVL 271 (356)
T ss_dssp HHHTSCCSEEEECS-C---------CHHHHHHHHHHSCTTCEEEE
T ss_pred HHhCCCCCEEEECC-C---------ChHHHHHHHHHhcCCCEEEE
Confidence 1 235799998422 1 13467888899999999874
No 315
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.19 E-value=0.025 Score=54.11 Aligned_cols=97 Identities=13% Similarity=0.071 Sum_probs=64.5
Q ss_pred CCCCCEEEEeecc-cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccc----cC
Q 038076 139 VPNGPIAIYGLGG-GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSE----DA 213 (345)
Q Consensus 139 ~~p~~VLiIG~G~-G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~----~~ 213 (345)
.+..+||++|+|+ |.++.++++.....+|.+++.+++-.+.++++ +... -+.....|..+.+. ..
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~~---------vi~~~~~~~~~~i~~~~~~~ 250 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV-GATA---------TVDPSAGDVVEAIAGPVGLV 250 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH-TCSE---------EECTTSSCHHHHHHSTTSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc-CCCE---------EECCCCcCHHHHHHhhhhcc
Confidence 4568999999864 77777888776545999999999999999884 4221 00000122222222 12
Q ss_pred CCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 214 SGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 214 ~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
++.+|+||--. . ..+.++.+.+.|+++|.+++
T Consensus 251 ~gg~Dvvid~~-G---------~~~~~~~~~~~l~~~G~vv~ 282 (370)
T 4ej6_A 251 PGGVDVVIECA-G---------VAETVKQSTRLAKAGGTVVI 282 (370)
T ss_dssp TTCEEEEEECS-C---------CHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCEEEECC-C---------CHHHHHHHHHHhccCCEEEE
Confidence 34899998422 1 13578889999999999875
No 316
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.17 E-value=0.046 Score=51.39 Aligned_cols=94 Identities=13% Similarity=0.190 Sum_probs=64.6
Q ss_pred CCCCCEEEEeecc-cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEc--cccccccc--C
Q 038076 139 VPNGPIAIYGLGG-GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIG--DVFSPSED--A 213 (345)
Q Consensus 139 ~~p~~VLiIG~G~-G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~g--Da~~~l~~--~ 213 (345)
.+..+||++|+|+ |..+.++++...+.+|.++|.+++-.+.++++ +.. .++.. |..+.+.+ .
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l-Ga~------------~~i~~~~~~~~~v~~~t~ 236 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV-GAD------------AAVKSGAGAADAIRELTG 236 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT-TCS------------EEEECSTTHHHHHHHHHG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc-CCC------------EEEcCCCcHHHHHHHHhC
Confidence 4567899999864 77777888776678999999999999999874 322 12211 11111211 2
Q ss_pred CCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 214 SGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 214 ~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
...+|+|+--. . ..+.++.+.+.|+++|.++.
T Consensus 237 g~g~d~v~d~~-G---------~~~~~~~~~~~l~~~G~iv~ 268 (345)
T 3jv7_A 237 GQGATAVFDFV-G---------AQSTIDTAQQVVAVDGHISV 268 (345)
T ss_dssp GGCEEEEEESS-C---------CHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCeEEEECC-C---------CHHHHHHHHHHHhcCCEEEE
Confidence 34799988422 1 13578899999999999874
No 317
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.99 E-value=0.057 Score=51.54 Aligned_cols=93 Identities=12% Similarity=0.183 Sum_probs=60.8
Q ss_pred CCCCCEEEEeecc-cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 139 VPNGPIAIYGLGG-GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 139 ~~p~~VLiIG~G~-G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
.+..+||++|+|+ |.++.++++.. +.+|++++.+++-.+.+++ ++.. .++..+-.++++...+.+
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~-lGa~------------~vi~~~~~~~~~~~~~g~ 258 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKA-LGAD------------EVVNSRNADEMAAHLKSF 258 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHH-HTCS------------EEEETTCHHHHHTTTTCE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH-cCCc------------EEeccccHHHHHHhhcCC
Confidence 4568899999874 67777777765 5689999999999999987 4422 122111112222223679
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
|+||--. ... +.++.+.+.|+++|.++.
T Consensus 259 Dvvid~~-g~~---------~~~~~~~~~l~~~G~iv~ 286 (369)
T 1uuf_A 259 DFILNTV-AAP---------HNLDDFTTLLKRDGTMTL 286 (369)
T ss_dssp EEEEECC-SSC---------CCHHHHHTTEEEEEEEEE
T ss_pred CEEEECC-CCH---------HHHHHHHHHhccCCEEEE
Confidence 9998432 211 135677789999998764
No 318
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=94.98 E-value=0.25 Score=47.50 Aligned_cols=107 Identities=17% Similarity=-0.033 Sum_probs=74.8
Q ss_pred CCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc-------CC
Q 038076 142 GPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED-------AS 214 (345)
Q Consensus 142 ~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~-------~~ 214 (345)
.++++|-||+|.+...+.+. .-..+.+||+|+..++..+.++. ...++.+|..++... ..
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G~~~v~avE~d~~a~~t~~~N~~------------~~~~~~~DI~~~~~~~~~~~~~~~ 69 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-GFDVKMAVEIDQHAINTHAINFP------------RSLHVQEDVSLLNAEIIKGFFKND 69 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-TCEEEEEECSCHHHHHHHHHHCT------------TSEEECCCGGGCCHHHHHHHHCSC
T ss_pred CeEEEEccCcCHHHHHHHHC-CCcEEEEEeCCHHHHHHHHHhCC------------CCceEecChhhcCHHHHHhhcccC
Confidence 47999999999999888765 33457799999999999988873 356788999886432 24
Q ss_pred CcccEEEEcCCCCCC-CC--CCc------chHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 215 GRYAGIVVDLFSEGK-VL--PQL------EEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~~-~p--~~l------~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
..+|+|+.+.+..+. .. ... .-.+++ .+.+.++|.=+++=|+.+--.
T Consensus 70 ~~~D~i~ggpPCQ~fS~ag~~~~~d~r~~L~~~~~-~~v~~~~P~~~v~ENV~gl~s 125 (376)
T 3g7u_A 70 MPIDGIIGGPPCQGFSSIGKGNPDDSRNQLYMHFY-RLVSELQPLFFLAENVPGIMQ 125 (376)
T ss_dssp CCCCEEEECCCCCTTC-------CHHHHHHHHHHH-HHHHHHCCSEEEEEECTTTTC
T ss_pred CCeeEEEecCCCCCcccccCCCCCCchHHHHHHHH-HHHHHhCCCEEEEecchHhhc
Confidence 689999987765431 00 001 112333 344567999999889987654
No 319
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.92 E-value=0.03 Score=52.73 Aligned_cols=67 Identities=18% Similarity=0.123 Sum_probs=48.5
Q ss_pred CCCCcEEEEEccccccccc-CCCcccEEEEcCCCCCCCC---CC-------cchHHHHHHHHhccCCCcEEEEEecCC
Q 038076 194 ATGGVLQVHIGDVFSPSED-ASGRYAGIVVDLFSEGKVL---PQ-------LEEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 194 ~~~~rv~v~~gDa~~~l~~-~~~~yD~Ii~D~f~~~~~p---~~-------l~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
+...+.+++++|+.+.++. .++++|+|++|.+-..... .. -.-.+.+..+++.|+|||.+++++...
T Consensus 10 ~~~~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 10 YTTSNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp EECSSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred eecCCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 3456799999999998765 4578999999964321110 00 023567888999999999999988754
No 320
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.91 E-value=0.044 Score=52.32 Aligned_cols=94 Identities=17% Similarity=0.213 Sum_probs=62.7
Q ss_pred CCCCCEEEEeec-ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE-----ccccccccc
Q 038076 139 VPNGPIAIYGLG-GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI-----GDVFSPSED 212 (345)
Q Consensus 139 ~~p~~VLiIG~G-~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~-----gDa~~~l~~ 212 (345)
.+..+||++|+| .|.++.++++.....+|.++|.+++-.+.+++. +... ++. .|..+.+..
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~~------------vi~~~~~~~~~~~~i~~ 258 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF-GVNE------------FVNPKDHDKPIQEVIVD 258 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT-TCCE------------EECGGGCSSCHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc-CCcE------------EEccccCchhHHHHHHH
Confidence 456899999986 367777777765444899999999999998874 3221 111 122222221
Q ss_pred -CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCC-cEEEE
Q 038076 213 -ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPN-GRFMV 255 (345)
Q Consensus 213 -~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pg-Gvlvv 255 (345)
.++.+|+||--. . ..+.++.+.+.|+++ |.+++
T Consensus 259 ~~~gg~D~vid~~-g---------~~~~~~~~~~~l~~g~G~iv~ 293 (378)
T 3uko_A 259 LTDGGVDYSFECI-G---------NVSVMRAALECCHKGWGTSVI 293 (378)
T ss_dssp HTTSCBSEEEECS-C---------CHHHHHHHHHTBCTTTCEEEE
T ss_pred hcCCCCCEEEECC-C---------CHHHHHHHHHHhhccCCEEEE
Confidence 344899998422 1 135788899999997 98864
No 321
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.74 E-value=0.077 Score=49.97 Aligned_cols=88 Identities=14% Similarity=0.140 Sum_probs=61.4
Q ss_pred CCCCCEEEEeecc-cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 139 VPNGPIAIYGLGG-GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 139 ~~p~~VLiIG~G~-G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
.+..+||++|+|+ |..+.++++.. +.+|++++.+++-.+.+++ ++.. .++ .|... +. +.+
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~-lGa~------------~v~-~~~~~-~~---~~~ 235 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALS-MGVK------------HFY-TDPKQ-CK---EEL 235 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHH-TTCS------------EEE-SSGGG-CC---SCE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHh-cCCC------------eec-CCHHH-Hh---cCC
Confidence 4678999999864 77777777765 4699999999999999987 4422 122 34322 22 289
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
|+|+- ..... +.++.+.+.|+++|.++.
T Consensus 236 D~vid-~~g~~---------~~~~~~~~~l~~~G~iv~ 263 (348)
T 3two_A 236 DFIIS-TIPTH---------YDLKDYLKLLTYNGDLAL 263 (348)
T ss_dssp EEEEE-CCCSC---------CCHHHHHTTEEEEEEEEE
T ss_pred CEEEE-CCCcH---------HHHHHHHHHHhcCCEEEE
Confidence 99984 32211 136778889999999875
No 322
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.55 E-value=0.068 Score=50.07 Aligned_cols=98 Identities=11% Similarity=-0.004 Sum_probs=63.3
Q ss_pred CCCCCEEEEeec-ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc--CCC
Q 038076 139 VPNGPIAIYGLG-GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED--ASG 215 (345)
Q Consensus 139 ~~p~~VLiIG~G-~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~--~~~ 215 (345)
.+..+||+.|+| .|.++.++++......+.+++.+++-.+.++++ +... -+.....|..+..+. ...
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l-Ga~~---------~i~~~~~~~~~~~~~~~~~~ 228 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF-GAMQ---------TFNSSEMSAPQMQSVLRELR 228 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-TCSE---------EEETTTSCHHHHHHHHGGGC
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc-CCeE---------EEeCCCCCHHHHHHhhcccC
Confidence 466889999986 456666777777667889999999999999885 3221 111111122222211 245
Q ss_pred cccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 216 RYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
.+|+|+-.. . ..+.++.+.+.|+++|.+++-
T Consensus 229 g~d~v~d~~-G---------~~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 229 FNQLILETA-G---------VPQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp SSEEEEECS-C---------SHHHHHHHHHHCCTTCEEEEC
T ss_pred Ccccccccc-c---------ccchhhhhhheecCCeEEEEE
Confidence 678777432 1 135788888999999998753
No 323
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.49 E-value=0.24 Score=41.88 Aligned_cols=95 Identities=20% Similarity=0.158 Sum_probs=57.9
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccc--ccccC--C
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFS--PSEDA--S 214 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~--~l~~~--~ 214 (345)
..+|+++|+| |..+++.|.+. .+.+|+++|.|++-++.+++. + +.++.+|+.+ .+... -
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~-~g~~V~vid~~~~~~~~~~~~-g-------------~~~~~gd~~~~~~l~~~~~~ 103 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRAR-YGKISLGIEIREEAAQQHRSE-G-------------RNVISGDATDPDFWERILDT 103 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHH-HCSCEEEEESCHHHHHHHHHT-T-------------CCEEECCTTCHHHHHTBCSC
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-cCCeEEEEECCHHHHHHHHHC-C-------------CCEEEcCCCCHHHHHhccCC
Confidence 4689999987 33444555442 146899999999988877652 2 3466777654 23332 4
Q ss_pred CcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEe
Q 038076 215 GRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
+.+|+|++-..+. -.... .-...+.+.|++.+++..
T Consensus 104 ~~ad~vi~~~~~~------~~~~~-~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 104 GHVKLVLLAMPHH------QGNQT-ALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp CCCCEEEECCSSH------HHHHH-HHHHHHHTTCCSEEEEEE
T ss_pred CCCCEEEEeCCCh------HHHHH-HHHHHHHHCCCCEEEEEE
Confidence 5799999743221 12222 333455677787777644
No 324
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=94.46 E-value=0.038 Score=53.21 Aligned_cols=102 Identities=14% Similarity=0.004 Sum_probs=64.0
Q ss_pred CCCCCEEEEeecc-cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE---ccc-cccccc-
Q 038076 139 VPNGPIAIYGLGG-GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI---GDV-FSPSED- 212 (345)
Q Consensus 139 ~~p~~VLiIG~G~-G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~---gDa-~~~l~~- 212 (345)
.+..+||++|+|+ |.++.++++.....+|+++|.+++-.+.++++ +. +++. .|. .+.+..
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga-------------~~i~~~~~~~~~~~~~~~ 249 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA-GF-------------ETIDLRNSAPLRDQIDQI 249 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT-TC-------------EEEETTSSSCHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc-CC-------------cEEcCCCcchHHHHHHHH
Confidence 3567899999875 77788888765434999999999999999864 32 1221 122 222221
Q ss_pred -CCCcccEEEEcCCCCCCC---C--CCcchHHHHHHHHhccCCCcEEEE
Q 038076 213 -ASGRYAGIVVDLFSEGKV---L--PQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 213 -~~~~yD~Ii~D~f~~~~~---p--~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
....+|+||--.... .. + .++...+.++.+.+.|+++|.+++
T Consensus 250 ~~g~g~Dvvid~~g~~-~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~ 297 (398)
T 2dph_A 250 LGKPEVDCGVDAVGFE-AHGLGDEANTETPNGALNSLFDVVRAGGAIGI 297 (398)
T ss_dssp HSSSCEEEEEECSCTT-CBCSGGGTTSBCTTHHHHHHHHHEEEEEEEEC
T ss_pred hCCCCCCEEEECCCCc-cccccccccccccHHHHHHHHHHHhcCCEEEE
Confidence 234799998433221 10 0 011123468888899999999863
No 325
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.29 E-value=0.18 Score=47.10 Aligned_cols=95 Identities=18% Similarity=0.155 Sum_probs=63.3
Q ss_pred CCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccc-ccccCCCccc
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFS-PSEDASGRYA 218 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~-~l~~~~~~yD 218 (345)
++|.+||+| |+.+++.+.+.....+|.++|.+++-++.+++. +.. .-...|..+ . -+..|
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~-G~~------------~~~~~~~~~~~----~~~aD 96 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-GII------------DEGTTSIAKVE----DFSPD 96 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-TSC------------SEEESCTTGGG----GGCCS
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC-CCc------------chhcCCHHHHh----hccCC
Confidence 689999999 778888877642224899999999998888764 211 011233333 2 24689
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
+||+-+ |.. ...+.++.+...|+++.++ +++.+..
T Consensus 97 vVilav------p~~-~~~~vl~~l~~~l~~~~iv-~d~~Svk 131 (314)
T 3ggo_A 97 FVMLSS------PVR-TFREIAKKLSYILSEDATV-TDQGSVK 131 (314)
T ss_dssp EEEECS------CGG-GHHHHHHHHHHHSCTTCEE-EECCSCC
T ss_pred EEEEeC------CHH-HHHHHHHHHhhccCCCcEE-EECCCCc
Confidence 999844 222 3567888999889887655 5655433
No 326
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.22 E-value=0.045 Score=50.76 Aligned_cols=64 Identities=22% Similarity=0.226 Sum_probs=44.0
Q ss_pred CCcEEEEEccccccccc-CCCcccEEEEcCCCCCC--C---CCCc--------c---hHHHHHHHHhccCCCcEEEEEec
Q 038076 196 GGVLQVHIGDVFSPSED-ASGRYAGIVVDLFSEGK--V---LPQL--------E---EVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 196 ~~rv~v~~gDa~~~l~~-~~~~yD~Ii~D~f~~~~--~---p~~l--------~---t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
..+++++++|..+++.. .+++||+|+.|.+-... . +..+ + -.+.++++++.|+|||.+++++.
T Consensus 19 ~~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 19 FGVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp --CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 45789999999998765 35789999998643211 0 1110 0 12456789999999999999887
Q ss_pred C
Q 038076 259 G 259 (345)
Q Consensus 259 ~ 259 (345)
.
T Consensus 99 d 99 (297)
T 2zig_A 99 D 99 (297)
T ss_dssp C
T ss_pred C
Confidence 4
No 327
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.12 E-value=0.11 Score=49.08 Aligned_cols=93 Identities=9% Similarity=-0.005 Sum_probs=61.4
Q ss_pred CCCCCEEEEeecc-cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE----ccccccccc-
Q 038076 139 VPNGPIAIYGLGG-GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI----GDVFSPSED- 212 (345)
Q Consensus 139 ~~p~~VLiIG~G~-G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~----gDa~~~l~~- 212 (345)
.+..+||++|+|+ |..+..+++.. +.+|.+++.+++-.+.+++. +.. .++. .|..+-+..
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l-Ga~------------~~~~~~~~~~~~~~i~~~ 232 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNC-GAD------------VTLVVDPAKEEESSIIER 232 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT-TCS------------EEEECCTTTSCHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHh-CCC------------EEEcCcccccHHHHHHHH
Confidence 4568899999764 66777777765 46799999999999999864 321 1221 122222211
Q ss_pred C----CCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 213 A----SGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 213 ~----~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
. .+.+|+||--. . ..+.++.+.+.|+++|.++.
T Consensus 233 ~~~~~g~g~D~vid~~-g---------~~~~~~~~~~~l~~~G~iv~ 269 (352)
T 1e3j_A 233 IRSAIGDLPNVTIDCS-G---------NEKCITIGINITRTGGTLML 269 (352)
T ss_dssp HHHHSSSCCSEEEECS-C---------CHHHHHHHHHHSCTTCEEEE
T ss_pred hccccCCCCCEEEECC-C---------CHHHHHHHHHHHhcCCEEEE
Confidence 1 35799998422 1 12467888899999999874
No 328
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.11 E-value=0.25 Score=40.59 Aligned_cols=100 Identities=10% Similarity=0.022 Sum_probs=60.6
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECC-HHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc--ccc-CC
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEID-EILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP--SED-AS 214 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEid-p~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~--l~~-~~ 214 (345)
.++|+++|+| |..+++.|.+ .+.+|+++|.| ++-.+..++.+. ..+.++.+|+.+. +.. .-
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~--~g~~V~vid~~~~~~~~~~~~~~~-----------~~~~~i~gd~~~~~~l~~a~i 69 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQ--RGQNVTVISNLPEDDIKQLEQRLG-----------DNADVIPGDSNDSSVLKKAGI 69 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH--TTCCEEEEECCCHHHHHHHHHHHC-----------TTCEEEESCTTSHHHHHHHTT
T ss_pred CCcEEEECCCHHHHHHHHHHHH--CCCCEEEEECCChHHHHHHHHhhc-----------CCCeEEEcCCCCHHHHHHcCh
Confidence 4689999875 2234444443 25789999998 455544444332 2377899998752 322 24
Q ss_pred CcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCC
Q 038076 215 GRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
+..|+|++-..+. ..........+.+.|...+++.+...
T Consensus 70 ~~ad~vi~~~~~d-------~~n~~~~~~a~~~~~~~~ii~~~~~~ 108 (153)
T 1id1_A 70 DRCRAILALSDND-------ADNAFVVLSAKDMSSDVKTVLAVSDS 108 (153)
T ss_dssp TTCSEEEECSSCH-------HHHHHHHHHHHHHTSSSCEEEECSSG
T ss_pred hhCCEEEEecCCh-------HHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 6799999744221 12334455566777887777655443
No 329
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.08 E-value=0.22 Score=47.20 Aligned_cols=93 Identities=12% Similarity=-0.016 Sum_probs=61.5
Q ss_pred CCCCCEEEEeecc-cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc---ccc--
Q 038076 139 VPNGPIAIYGLGG-GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP---SED-- 212 (345)
Q Consensus 139 ~~p~~VLiIG~G~-G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~---l~~-- 212 (345)
.+..+||++|+|+ |..+..+++.. +.+|++++.+++-.+.++++ +.. .++..+..++ +..
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l-Ga~------------~vi~~~~~~~~~~v~~~~ 253 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFAL-GAD------------HGINRLEEDWVERVYALT 253 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH-TCS------------EEEETTTSCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHHc-CCC------------EEEcCCcccHHHHHHHHh
Confidence 4568899999764 66777777765 56999999999999998874 422 1222221222 211
Q ss_pred CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 213 ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 213 ~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
..+.+|+|+--. .. +.++.+.+.|+++|.+++-
T Consensus 254 ~g~g~D~vid~~-g~----------~~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 254 GDRGADHILEIA-GG----------AGLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp TTCCEEEEEEET-TS----------SCHHHHHHHEEEEEEEEEE
T ss_pred CCCCceEEEECC-Ch----------HHHHHHHHHhhcCCEEEEE
Confidence 345799988533 21 1366777899999998753
No 330
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=94.07 E-value=0.025 Score=47.93 Aligned_cols=103 Identities=17% Similarity=0.164 Sum_probs=67.8
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccC----CC
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDA----SG 215 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~----~~ 215 (345)
-+.-||++|+|.|-.=..+.+.+|+-+|.++|-. ..-| +. ..-|.-+++.||+++.+... +.
T Consensus 40 ~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~------~~~h---p~-----~~P~~e~~ilGdi~~tL~~~~~r~g~ 105 (174)
T 3iht_A 40 LSGPVYELGLGNGRTYHHLRQHVQGREIYVFERA------VASH---PD-----STPPEAQLILGDIRETLPATLERFGA 105 (174)
T ss_dssp CCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESS------CCCC---GG-----GCCCGGGEEESCHHHHHHHHHHHHCS
T ss_pred CCCceEEecCCCChhHHHHHHhCCCCcEEEEEee------eccC---CC-----CCCchHheecccHHHHHHHHHHhcCC
Confidence 4688999999999999999999999999999941 1111 11 11244568999999988653 45
Q ss_pred cccEEEEcCCCCCCCCCCcchHHHH-HHHHhccCCCcEEEEEe
Q 038076 216 RYAGIVVDLFSEGKVLPQLEEVATW-LKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~~p~~l~t~ef~-~~~~~~L~pgGvlvvn~ 257 (345)
+.-++=.|+-.+.. -....+...+ ..+...|.|||+++...
T Consensus 106 ~a~LaHaD~G~g~~-~~d~a~a~~lsplI~~~la~GGi~vS~~ 147 (174)
T 3iht_A 106 TASLVHADLGGHNR-EKNDRFARLISPLIEPHLAQGGLMVSSD 147 (174)
T ss_dssp CEEEEEECCCCSCH-HHHHHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred ceEEEEeecCCCCc-chhHHHHHhhhHHHHHHhcCCcEEEeCC
Confidence 55566567644321 0111122222 25677899999997543
No 331
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.04 E-value=0.29 Score=42.68 Aligned_cols=92 Identities=15% Similarity=0.020 Sum_probs=58.4
Q ss_pred CEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc--ccc-CCCcc
Q 038076 143 PIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP--SED-ASGRY 217 (345)
Q Consensus 143 ~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~--l~~-~~~~y 217 (345)
+|+++|+| |..+++.|.+ .+.+|+++|.|++.++...+..+ ..++.+|+.+. ++. .-+..
T Consensus 2 ~iiIiG~G~~G~~la~~L~~--~g~~v~vid~~~~~~~~l~~~~~-------------~~~i~gd~~~~~~l~~a~i~~a 66 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLS--RKYGVVIINKDRELCEEFAKKLK-------------ATIIHGDGSHKEILRDAEVSKN 66 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHH--TTCCEEEEESCHHHHHHHHHHSS-------------SEEEESCTTSHHHHHHHTCCTT
T ss_pred EEEEECCCHHHHHHHHHHHh--CCCeEEEEECCHHHHHHHHHHcC-------------CeEEEcCCCCHHHHHhcCcccC
Confidence 68999976 3344555544 35789999999998886554432 56889998763 222 34689
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
|+|++-..+. ..........+.+.+...++.-
T Consensus 67 d~vi~~~~~d-------~~n~~~~~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 67 DVVVILTPRD-------EVNLFIAQLVMKDFGVKRVVSL 98 (218)
T ss_dssp CEEEECCSCH-------HHHHHHHHHHHHTSCCCEEEEC
T ss_pred CEEEEecCCc-------HHHHHHHHHHHHHcCCCeEEEE
Confidence 9999743221 2233455555566676666543
No 332
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.02 E-value=0.038 Score=52.05 Aligned_cols=93 Identities=14% Similarity=0.088 Sum_probs=61.3
Q ss_pred CCCCEEEEeecc-cHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccc-cccccc--CC
Q 038076 140 PNGPIAIYGLGG-GTAAHLMLDLW-PSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDV-FSPSED--AS 214 (345)
Q Consensus 140 ~p~~VLiIG~G~-G~~~~~l~~~~-p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa-~~~l~~--~~ 214 (345)
+..+||++|+|+ |..+.++++.. |+.+|++++.+++-.+.+++. +.. .++.-+- .+++.. ..
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l-Ga~------------~vi~~~~~~~~~~~~~~g 236 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL-GAD------------YVSEMKDAESLINKLTDG 236 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH-TCS------------EEECHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh-CCC------------EEeccccchHHHHHhhcC
Confidence 678999999863 66666776653 467999999999999999874 422 1121100 112211 23
Q ss_pred CcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 215 GRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
..+|+||--. . ..+.++.+.+.|+++|.++.
T Consensus 237 ~g~D~vid~~-g---------~~~~~~~~~~~l~~~G~iv~ 267 (344)
T 2h6e_A 237 LGASIAIDLV-G---------TEETTYNLGKLLAQEGAIIL 267 (344)
T ss_dssp CCEEEEEESS-C---------CHHHHHHHHHHEEEEEEEEE
T ss_pred CCccEEEECC-C---------ChHHHHHHHHHhhcCCEEEE
Confidence 4799998432 1 13468888899999999864
No 333
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.02 E-value=0.069 Score=51.27 Aligned_cols=103 Identities=12% Similarity=0.063 Sum_probs=64.3
Q ss_pred CCCCCEEEEeecc-cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEc---c-ccccccc-
Q 038076 139 VPNGPIAIYGLGG-GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIG---D-VFSPSED- 212 (345)
Q Consensus 139 ~~p~~VLiIG~G~-G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~g---D-a~~~l~~- 212 (345)
.+..+||++|+|+ |.++.++++.....+|.++|.+++-.+.++++ +. +++.- | ..+.+..
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l-Ga-------------~~i~~~~~~~~~~~v~~~ 249 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ-GF-------------EIADLSLDTPLHEQIAAL 249 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-TC-------------EEEETTSSSCHHHHHHHH
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc-CC-------------cEEccCCcchHHHHHHHH
Confidence 3567899999764 77788888876545899999999999999874 32 11211 1 1122221
Q ss_pred -CCCcccEEEEcCCCCCCC-----CCCcchHHHHHHHHhccCCCcEEEE
Q 038076 213 -ASGRYAGIVVDLFSEGKV-----LPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 213 -~~~~yD~Ii~D~f~~~~~-----p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
....+|+||--....... ..+....+.++.+.+.|+++|.+++
T Consensus 250 t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~ 298 (398)
T 1kol_A 250 LGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGI 298 (398)
T ss_dssp HSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEE
T ss_pred hCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEE
Confidence 235799998433221000 0011123468888999999999864
No 334
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.94 E-value=0.095 Score=49.83 Aligned_cols=94 Identities=17% Similarity=0.203 Sum_probs=61.7
Q ss_pred CCCCCEEEEeecc-cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE-----ccccccccc
Q 038076 139 VPNGPIAIYGLGG-GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI-----GDVFSPSED 212 (345)
Q Consensus 139 ~~p~~VLiIG~G~-G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~-----gDa~~~l~~ 212 (345)
.+..+||++|+|+ |..+.++++.....+|++++.+++-.+.++++ +.. .++. .|..+.+..
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~------------~vi~~~~~~~~~~~~i~~ 256 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL-GAT------------ECLNPKDYDKPIYEVICE 256 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT-TCS------------EEECGGGCSSCHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc-CCc------------EEEecccccchHHHHHHH
Confidence 4567899999763 66777777765434899999999999999863 422 1111 112222221
Q ss_pred -CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCC-cEEEE
Q 038076 213 -ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPN-GRFMV 255 (345)
Q Consensus 213 -~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pg-Gvlvv 255 (345)
.++.+|+||--. . ..+.++.+.+.|+++ |.++.
T Consensus 257 ~t~gg~Dvvid~~-g---------~~~~~~~~~~~l~~~~G~iv~ 291 (373)
T 1p0f_A 257 KTNGGVDYAVECA-G---------RIETMMNALQSTYCGSGVTVV 291 (373)
T ss_dssp HTTSCBSEEEECS-C---------CHHHHHHHHHTBCTTTCEEEE
T ss_pred HhCCCCCEEEECC-C---------CHHHHHHHHHHHhcCCCEEEE
Confidence 234899998422 1 135688889999999 99864
No 335
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.86 E-value=0.1 Score=49.60 Aligned_cols=94 Identities=17% Similarity=0.173 Sum_probs=61.7
Q ss_pred CCCCCEEEEeecc-cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE-----ccccccccc
Q 038076 139 VPNGPIAIYGLGG-GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI-----GDVFSPSED 212 (345)
Q Consensus 139 ~~p~~VLiIG~G~-G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~-----gDa~~~l~~ 212 (345)
.+..+||++|+|+ |.++.++++.....+|++++.+++-.+.++++ +.. .++. .|..+.+..
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~------------~vi~~~~~~~~~~~~v~~ 260 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL-GAT------------DCLNPRELDKPVQDVITE 260 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TCS------------EEECGGGCSSCHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-CCc------------EEEccccccchHHHHHHH
Confidence 3567899999763 67777777776434899999999999999764 422 1111 112222211
Q ss_pred -CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCC-cEEEE
Q 038076 213 -ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPN-GRFMV 255 (345)
Q Consensus 213 -~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pg-Gvlvv 255 (345)
.++.+|+||- ... ..+.++.+.+.|+++ |.+++
T Consensus 261 ~~~~g~Dvvid-~~G---------~~~~~~~~~~~l~~~~G~iv~ 295 (376)
T 1e3i_A 261 LTAGGVDYSLD-CAG---------TAQTLKAAVDCTVLGWGSCTV 295 (376)
T ss_dssp HHTSCBSEEEE-SSC---------CHHHHHHHHHTBCTTTCEEEE
T ss_pred HhCCCccEEEE-CCC---------CHHHHHHHHHHhhcCCCEEEE
Confidence 2347999984 211 135688889999999 99864
No 336
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=93.83 E-value=0.25 Score=47.54 Aligned_cols=95 Identities=17% Similarity=0.144 Sum_probs=59.7
Q ss_pred CCCCCEEEEeecc-cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE---ccccccccc--
Q 038076 139 VPNGPIAIYGLGG-GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI---GDVFSPSED-- 212 (345)
Q Consensus 139 ~~p~~VLiIG~G~-G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~---gDa~~~l~~-- 212 (345)
.+..+||++|+|+ |..+.++++.....+|.+++.+++-.+.++++ +.. .++. .|..+.+..
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l-Ga~------------~vi~~~~~~~~~~i~~~t 278 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL-GAD------------HVIDPTKENFVEAVLDYT 278 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH-TCS------------EEECTTTSCHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc-CCC------------EEEcCCCCCHHHHHHHHh
Confidence 4567899999863 67777777776545999999999999999875 322 1121 122222222
Q ss_pred CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhcc----CCCcEEEE
Q 038076 213 ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRL----MPNGRFMV 255 (345)
Q Consensus 213 ~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L----~pgGvlvv 255 (345)
....+|+||--+ .. ....++.+.+.| +++|.+++
T Consensus 279 ~g~g~D~vid~~-g~--------~~~~~~~~~~~l~~~~~~~G~iv~ 316 (404)
T 3ip1_A 279 NGLGAKLFLEAT-GV--------PQLVWPQIEEVIWRARGINATVAI 316 (404)
T ss_dssp TTCCCSEEEECS-SC--------HHHHHHHHHHHHHHCSCCCCEEEE
T ss_pred CCCCCCEEEECC-CC--------cHHHHHHHHHHHHhccCCCcEEEE
Confidence 245799998422 11 112445555555 99999875
No 337
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=93.83 E-value=0.11 Score=49.45 Aligned_cols=94 Identities=15% Similarity=0.197 Sum_probs=61.5
Q ss_pred CCCCCEEEEeecc-cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE-c----cccccccc
Q 038076 139 VPNGPIAIYGLGG-GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI-G----DVFSPSED 212 (345)
Q Consensus 139 ~~p~~VLiIG~G~-G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~-g----Da~~~l~~ 212 (345)
.+..+||++|+|+ |..+.++++.....+|++++.+++-.+.++++ +... ++. . |..+.+..
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga~~------------vi~~~~~~~~~~~~~~~ 257 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF-GATD------------FVNPNDHSEPISQVLSK 257 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TCCE------------EECGGGCSSCHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh-CCce------------EEeccccchhHHHHHHH
Confidence 3567899999764 66777777765434899999999999999864 4221 111 1 11122211
Q ss_pred -CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCC-cEEEE
Q 038076 213 -ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPN-GRFMV 255 (345)
Q Consensus 213 -~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pg-Gvlvv 255 (345)
.++.+|+||--. . ..+.++.+.+.|+++ |.++.
T Consensus 258 ~~~~g~D~vid~~-g---------~~~~~~~~~~~l~~~~G~iv~ 292 (374)
T 1cdo_A 258 MTNGGVDFSLECV-G---------NVGVMRNALESCLKGWGVSVL 292 (374)
T ss_dssp HHTSCBSEEEECS-C---------CHHHHHHHHHTBCTTTCEEEE
T ss_pred HhCCCCCEEEECC-C---------CHHHHHHHHHHhhcCCcEEEE
Confidence 234799998422 1 135688889999999 99864
No 338
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.81 E-value=0.17 Score=48.26 Aligned_cols=102 Identities=17% Similarity=0.209 Sum_probs=58.7
Q ss_pred CCCCEEEEeec-ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 140 PNGPIAIYGLG-GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 140 ~p~~VLiIG~G-~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
++++|+++|+| .|..+..+++..+ .+|+++|.+++-.+.+++.++. .+..+..+..++ ...-..+|
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~G-a~V~v~dr~~~r~~~~~~~~~~-----------~~~~~~~~~~~~-~~~~~~~D 232 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLG-AQVQIFDINVERLSYLETLFGS-----------RVELLYSNSAEI-ETAVAEAD 232 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHGG-----------GSEEEECCHHHH-HHHHHTCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHhhCc-----------eeEeeeCCHHHH-HHHHcCCC
Confidence 45899999985 3444445555544 5999999999998888776531 122222221111 11113689
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+||.-...+....+.+.+.+ ..+.|+++|+++ ++..
T Consensus 233 vVI~~~~~~~~~~~~li~~~----~~~~~~~g~~iv-dv~~ 268 (361)
T 1pjc_A 233 LLIGAVLVPGRRAPILVPAS----LVEQMRTGSVIV-DVAV 268 (361)
T ss_dssp EEEECCCCTTSSCCCCBCHH----HHTTSCTTCEEE-ETTC
T ss_pred EEEECCCcCCCCCCeecCHH----HHhhCCCCCEEE-EEec
Confidence 99864433322223333433 446788988764 5554
No 339
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.81 E-value=0.48 Score=37.45 Aligned_cols=90 Identities=19% Similarity=0.037 Sum_probs=53.0
Q ss_pred CCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc--cc-cCCCc
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP--SE-DASGR 216 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~--l~-~~~~~ 216 (345)
.+|+++|+| |..++..+.+ .+.+|+++|.+++..+..++.++ +.++.+|..+. +. ..-+.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~--~g~~v~~~d~~~~~~~~~~~~~~-------------~~~~~~d~~~~~~l~~~~~~~ 69 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSE--KGHDIVLIDIDKDICKKASAEID-------------ALVINGDCTKIKTLEDAGIED 69 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHCS-------------SEEEESCTTSHHHHHHTTTTT
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCeEEEEECCHHHHHHHHHhcC-------------cEEEEcCCCCHHHHHHcCccc
Confidence 579999876 2234444443 25789999999998776655332 34566776432 22 12357
Q ss_pred ccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEE
Q 038076 217 YAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRF 253 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvl 253 (345)
+|+|++-..+ . ........+.+.++++-++
T Consensus 70 ~d~vi~~~~~------~-~~~~~~~~~~~~~~~~~ii 99 (140)
T 1lss_A 70 ADMYIAVTGK------E-EVNLMSSLLAKSYGINKTI 99 (140)
T ss_dssp CSEEEECCSC------H-HHHHHHHHHHHHTTCCCEE
T ss_pred CCEEEEeeCC------c-hHHHHHHHHHHHcCCCEEE
Confidence 9999985322 1 1223444555567776443
No 340
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.79 E-value=0.13 Score=48.99 Aligned_cols=94 Identities=14% Similarity=0.186 Sum_probs=61.5
Q ss_pred CCCCCEEEEeecc-cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE-----ccccccccc
Q 038076 139 VPNGPIAIYGLGG-GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI-----GDVFSPSED 212 (345)
Q Consensus 139 ~~p~~VLiIG~G~-G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~-----gDa~~~l~~ 212 (345)
.+..+||++|+|+ |..+.++++.....+|++++.+++-.+.++++ +.. .++. .|..+.+..
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga~------------~vi~~~~~~~~~~~~~~~ 256 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV-GAT------------ECVNPQDYKKPIQEVLTE 256 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TCS------------EEECGGGCSSCHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-CCc------------eEecccccchhHHHHHHH
Confidence 3567899999764 67777777765434899999999999998763 422 1111 111222221
Q ss_pred -CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCC-cEEEE
Q 038076 213 -ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPN-GRFMV 255 (345)
Q Consensus 213 -~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pg-Gvlvv 255 (345)
.+..+|+||--. . ..+.++.+.+.|+++ |.++.
T Consensus 257 ~~~~g~D~vid~~-g---------~~~~~~~~~~~l~~~~G~iv~ 291 (374)
T 2jhf_A 257 MSNGGVDFSFEVI-G---------RLDTMVTALSCCQEAYGVSVI 291 (374)
T ss_dssp HTTSCBSEEEECS-C---------CHHHHHHHHHHBCTTTCEEEE
T ss_pred HhCCCCcEEEECC-C---------CHHHHHHHHHHhhcCCcEEEE
Confidence 234799998422 1 135688888999999 99864
No 341
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.68 E-value=0.093 Score=44.95 Aligned_cols=95 Identities=16% Similarity=0.114 Sum_probs=56.8
Q ss_pred CCCCCEEEEee--cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc--CC
Q 038076 139 VPNGPIAIYGL--GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED--AS 214 (345)
Q Consensus 139 ~~p~~VLiIG~--G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~--~~ 214 (345)
.+.++||+.|+ |.|.....+++.. +.+|.+++.+++..+.+++. +.. ..+.....|..+.+.. ..
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~-g~~---------~~~d~~~~~~~~~~~~~~~~ 105 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLSRL-GVE---------YVGDSRSVDFADEILELTDG 105 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHTT-CCS---------EEEETTCSTHHHHHHHHTTT
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHc-CCC---------EEeeCCcHHHHHHHHHHhCC
Confidence 45678999995 3455555555443 57999999999988887653 311 0010001111111211 23
Q ss_pred CcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 215 GRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
+.+|+++..+ . .+.++.+.+.|+++|.++.
T Consensus 106 ~~~D~vi~~~-g----------~~~~~~~~~~l~~~G~~v~ 135 (198)
T 1pqw_A 106 YGVDVVLNSL-A----------GEAIQRGVQILAPGGRFIE 135 (198)
T ss_dssp CCEEEEEECC-C----------THHHHHHHHTEEEEEEEEE
T ss_pred CCCeEEEECC-c----------hHHHHHHHHHhccCCEEEE
Confidence 4699998532 1 1467888899999998864
No 342
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.68 E-value=0.11 Score=49.21 Aligned_cols=94 Identities=16% Similarity=0.224 Sum_probs=61.4
Q ss_pred CCCCCEEEEeecc-cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE-----ccccccccc
Q 038076 139 VPNGPIAIYGLGG-GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI-----GDVFSPSED 212 (345)
Q Consensus 139 ~~p~~VLiIG~G~-G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~-----gDa~~~l~~ 212 (345)
.+..+||++|+|+ |.++.++++.....+|++++.+++-.+.++++ +... ++. .|..+.+..
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga~~------------vi~~~~~~~~~~~~v~~ 255 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF-GATE------------CINPQDFSKPIQEVLIE 255 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH-TCSE------------EECGGGCSSCHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc-CCce------------EeccccccccHHHHHHH
Confidence 3567899999763 66777777765434899999999999999864 4221 111 111222221
Q ss_pred -CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCC-cEEEE
Q 038076 213 -ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPN-GRFMV 255 (345)
Q Consensus 213 -~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pg-Gvlvv 255 (345)
.++.+|+||--. . ..+.++.+.+.|+++ |.++.
T Consensus 256 ~~~~g~D~vid~~-g---------~~~~~~~~~~~l~~~~G~iv~ 290 (373)
T 2fzw_A 256 MTDGGVDYSFECI-G---------NVKVMRAALEACHKGWGVSVV 290 (373)
T ss_dssp HTTSCBSEEEECS-C---------CHHHHHHHHHTBCTTTCEEEE
T ss_pred HhCCCCCEEEECC-C---------cHHHHHHHHHhhccCCcEEEE
Confidence 234799998422 1 135688889999999 99864
No 343
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.67 E-value=0.21 Score=48.69 Aligned_cols=95 Identities=17% Similarity=0.301 Sum_probs=64.2
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc--ccc-CCC
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP--SED-ASG 215 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~--l~~-~~~ 215 (345)
..+|+++|+| |-.+++.|.+ .+..|++||.||+.++.+++. + +.++.||+.+. |+. .-+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~--~g~~vvvId~d~~~v~~~~~~-g-------------~~vi~GDat~~~~L~~agi~ 67 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLS--SGVKMVVLDHDPDHIETLRKF-G-------------MKVFYGDATRMDLLESAGAA 67 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TTCCEEEEECCHHHHHHHHHT-T-------------CCCEESCTTCHHHHHHTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CCCCEEEEECCHHHHHHHHhC-C-------------CeEEEcCCCCHHHHHhcCCC
Confidence 4689999998 3345555554 358899999999999988763 2 45789999873 333 346
Q ss_pred cccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 216 RYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
+.|+|++-..+. ..........+.+.|+..+++-..
T Consensus 68 ~A~~viv~~~~~-------~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 68 KAEVLINAIDDP-------QTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp TCSEEEECCSSH-------HHHHHHHHHHHHHCTTCEEEEEES
T ss_pred ccCEEEECCCCh-------HHHHHHHHHHHHhCCCCeEEEEEC
Confidence 899999854331 223344555667888877766444
No 344
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=93.67 E-value=0.068 Score=50.33 Aligned_cols=93 Identities=14% Similarity=0.044 Sum_probs=61.0
Q ss_pred CCCCEEEEeecc-cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE---ccccccccc--C
Q 038076 140 PNGPIAIYGLGG-GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI---GDVFSPSED--A 213 (345)
Q Consensus 140 ~p~~VLiIG~G~-G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~---gDa~~~l~~--~ 213 (345)
+..+||++|+|+ |..+..+++.....+|++++.+++-.+.++++ +... ++. .|..+.+.+ .
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~-Ga~~------------~~~~~~~~~~~~v~~~~~ 233 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV-GADY------------VINPFEEDVVKEVMDITD 233 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH-TCSE------------EECTTTSCHHHHHHHHTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-CCCE------------EECCCCcCHHHHHHHHcC
Confidence 668999999853 66677777765433899999999999998864 3211 111 122222221 2
Q ss_pred CCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 214 SGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 214 ~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
...+|+||--.. ..+.++.+.+.|+++|.++.
T Consensus 234 g~g~D~vid~~g----------~~~~~~~~~~~l~~~G~iv~ 265 (348)
T 2d8a_A 234 GNGVDVFLEFSG----------APKALEQGLQAVTPAGRVSL 265 (348)
T ss_dssp TSCEEEEEECSC----------CHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCEEEECCC----------CHHHHHHHHHHHhcCCEEEE
Confidence 347999984321 13567888899999998764
No 345
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=93.58 E-value=0.075 Score=48.22 Aligned_cols=45 Identities=18% Similarity=0.262 Sum_probs=39.7
Q ss_pred CCCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcC
Q 038076 139 VPNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFG 185 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~ 185 (345)
.+...||+..||+|+++..+.+. +.++.++|++|..+++|++.+.
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~~~r~~ 255 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQANFVLN 255 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHH
Confidence 35578999999999999998875 5799999999999999999874
No 346
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=93.38 E-value=0.062 Score=50.85 Aligned_cols=92 Identities=15% Similarity=0.043 Sum_probs=57.9
Q ss_pred CCEEEEeec-ccHHH-HHHH-HhCCCCEEEEEECCHH---HHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCC
Q 038076 142 GPIAIYGLG-GGTAA-HLML-DLWPSLKLEGWEIDEI---LIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASG 215 (345)
Q Consensus 142 ~~VLiIG~G-~G~~~-~~l~-~~~p~~~v~~VEidp~---vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~ 215 (345)
.+||++|+| .|.++ .+++ +.....+|++++.+++ -.+.+++ ++... +.....|..+ +....+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~-lGa~~----------v~~~~~~~~~-i~~~~g 241 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE-LDATY----------VDSRQTPVED-VPDVYE 241 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH-TTCEE----------EETTTSCGGG-HHHHSC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH-cCCcc----------cCCCccCHHH-HHHhCC
Confidence 799999975 36666 6777 6544334999999998 8888876 34211 1000112223 222123
Q ss_pred cccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 216 RYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
.+|+||- ... ..+.++.+.+.|+++|.++.
T Consensus 242 g~Dvvid-~~g---------~~~~~~~~~~~l~~~G~iv~ 271 (357)
T 2b5w_A 242 QMDFIYE-ATG---------FPKHAIQSVQALAPNGVGAL 271 (357)
T ss_dssp CEEEEEE-CSC---------CHHHHHHHHHHEEEEEEEEE
T ss_pred CCCEEEE-CCC---------ChHHHHHHHHHHhcCCEEEE
Confidence 7999884 221 12467888899999999874
No 347
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=93.36 E-value=0.094 Score=49.86 Aligned_cols=93 Identities=18% Similarity=0.158 Sum_probs=62.6
Q ss_pred CCCCEEEEe-e-cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE--ccccccccc-CC
Q 038076 140 PNGPIAIYG-L-GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI--GDVFSPSED-AS 214 (345)
Q Consensus 140 ~p~~VLiIG-~-G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~--gDa~~~l~~-~~ 214 (345)
+..+||++| + |.|.++.++++...+.+|.+++.+++-.+.+++ ++... ++. .|..+-+.. ..
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~-lGad~------------vi~~~~~~~~~v~~~~~ 237 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS-LGAHH------------VIDHSKPLAAEVAALGL 237 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH-TTCSE------------EECTTSCHHHHHHTTCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-cCCCE------------EEeCCCCHHHHHHHhcC
Confidence 346899999 3 357777788876567899999999999999987 44221 111 121122222 34
Q ss_pred CcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 215 GRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
+.+|+|+-.. . ..+.++.+.+.|+++|.++.
T Consensus 238 ~g~Dvvid~~-g---------~~~~~~~~~~~l~~~G~iv~ 268 (363)
T 4dvj_A 238 GAPAFVFSTT-H---------TDKHAAEIADLIAPQGRFCL 268 (363)
T ss_dssp CCEEEEEECS-C---------HHHHHHHHHHHSCTTCEEEE
T ss_pred CCceEEEECC-C---------chhhHHHHHHHhcCCCEEEE
Confidence 6899887421 1 23578889999999999875
No 348
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.03 E-value=0.21 Score=41.20 Aligned_cols=98 Identities=10% Similarity=0.016 Sum_probs=55.4
Q ss_pred CCCCCEEEEeecc-c-HHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccc--ccccC-
Q 038076 139 VPNGPIAIYGLGG-G-TAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFS--PSEDA- 213 (345)
Q Consensus 139 ~~p~~VLiIG~G~-G-~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~--~l~~~- 213 (345)
.+..+|+++|+|. | .++..+.+ .+.+|+++|.+++.++.+++. ....++.+|..+ .+...
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~--~g~~V~vid~~~~~~~~~~~~-------------~g~~~~~~d~~~~~~l~~~~ 81 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASS--SGHSVVVVDKNEYAFHRLNSE-------------FSGFTVVGDAAEFETLKECG 81 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCGGGGGGSCTT-------------CCSEEEESCTTSHHHHHTTT
T ss_pred cCCCcEEEECCCHHHHHHHHHHHh--CCCeEEEEECCHHHHHHHHhc-------------CCCcEEEecCCCHHHHHHcC
Confidence 4567899999862 3 33444443 256999999998765543211 124466677543 22222
Q ss_pred CCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 214 SGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 214 ~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
-+.+|+|++-..+. ........+.+.+.+...++....
T Consensus 82 ~~~ad~Vi~~~~~~-------~~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 82 MEKADMVFAFTNDD-------STNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp GGGCSEEEECSSCH-------HHHHHHHHHHHHTSCCSEEEEECS
T ss_pred cccCCEEEEEeCCc-------HHHHHHHHHHHHHCCCCeEEEEEC
Confidence 35799999744221 122334445555666666665544
No 349
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.02 E-value=0.34 Score=45.48 Aligned_cols=106 Identities=13% Similarity=0.106 Sum_probs=64.8
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhc----------CCCCCC-CCCCCCCcEEEEEcccc
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYF----------GLSDLE-KPTATGGVLQVHIGDVF 207 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f----------~~~~~~-~~~~~~~rv~v~~gDa~ 207 (345)
.++|.+||+| |+.++..+++. +.+|+++|++++.++.+++.. ++.... .....-.++++. .|..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~ 82 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLA 82 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHH
Confidence 3689999998 56677776653 578999999999998876531 211000 000000133332 2322
Q ss_pred cccccCCCcccEEEEcCCCCCCCCCCc-chHHHHHHHHhccCCCcEEEEEecC
Q 038076 208 SPSEDASGRYAGIVVDLFSEGKVLPQL-EEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 208 ~~l~~~~~~yD~Ii~D~f~~~~~p~~l-~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+ .-+..|+||.-+ |..+ ...+.|+.+...++|+-+++.|..+
T Consensus 83 e----av~~aDlVieav------pe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~ 125 (319)
T 2dpo_A 83 E----AVEGVVHIQECV------PENLDLKRKIFAQLDSIVDDRVVLSSSSSC 125 (319)
T ss_dssp H----HTTTEEEEEECC------CSCHHHHHHHHHHHHTTCCSSSEEEECCSS
T ss_pred H----HHhcCCEEEEec------cCCHHHHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 2 235689999754 3322 4467889999999998888766554
No 350
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=92.99 E-value=0.19 Score=47.49 Aligned_cols=93 Identities=13% Similarity=0.116 Sum_probs=58.6
Q ss_pred CCCCEEEEeec-ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 140 PNGPIAIYGLG-GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 140 ~p~~VLiIG~G-~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
+..+||++|+| .|..+.++++.. +.+|++++.+++-.+.+++.++... ++..+-.+.+....+.+|
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~~lGa~~------------vi~~~~~~~~~~~~~g~D 246 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQDLGADD------------YVIGSDQAKMSELADSLD 246 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHTTSCCSC------------EEETTCHHHHHHSTTTEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHcCCce------------eeccccHHHHHHhcCCCC
Confidence 56789999975 356666666654 4699999999998888886666321 111111122222234799
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
+|+--. ... +.++.+.+.|+++|.++.
T Consensus 247 ~vid~~-g~~---------~~~~~~~~~l~~~G~iv~ 273 (357)
T 2cf5_A 247 YVIDTV-PVH---------HALEPYLSLLKLDGKLIL 273 (357)
T ss_dssp EEEECC-CSC---------CCSHHHHTTEEEEEEEEE
T ss_pred EEEECC-CCh---------HHHHHHHHHhccCCEEEE
Confidence 988422 211 124556688999999864
No 351
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=92.98 E-value=0.068 Score=50.36 Aligned_cols=65 Identities=14% Similarity=0.040 Sum_probs=46.7
Q ss_pred CCcEEEE-Eccccccccc-CCCcccEEEEcCCCCCCC-----CCCc--chHHHHHHHHhccCCCcEEEEEecCC
Q 038076 196 GGVLQVH-IGDVFSPSED-ASGRYAGIVVDLFSEGKV-----LPQL--EEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 196 ~~rv~v~-~gDa~~~l~~-~~~~yD~Ii~D~f~~~~~-----p~~l--~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
+...+++ ++|+.++++. .++++|+|++|.+-.... ...+ ...+.+..+++.|+|||.+++++...
T Consensus 36 ~~~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~ 109 (319)
T 1eg2_A 36 GTTRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQ 109 (319)
T ss_dssp CCEEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSC
T ss_pred cccceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcc
Confidence 4567888 9999998876 356899999997432210 0111 23567788899999999999987643
No 352
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=92.95 E-value=0.055 Score=49.13 Aligned_cols=59 Identities=14% Similarity=0.036 Sum_probs=42.4
Q ss_pred EEEEEccccccccc-CCCcccEEEEcCCCCCCC--CCCc--------chHHHHHHHHhccCCCcEEEEEe
Q 038076 199 LQVHIGDVFSPSED-ASGRYAGIVVDLFSEGKV--LPQL--------EEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 199 v~v~~gDa~~~l~~-~~~~yD~Ii~D~f~~~~~--p~~l--------~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
.+++.+|+.++++. .++++|+|++|.+-.... ...+ +..+.++.+++.|+|+|.++++.
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 46899999998876 346899999997432110 0111 33566788899999999998876
No 353
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=92.93 E-value=0.12 Score=48.82 Aligned_cols=95 Identities=16% Similarity=0.067 Sum_probs=58.6
Q ss_pred CCCCCEEEEeec-ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccc-cccccCCCc
Q 038076 139 VPNGPIAIYGLG-GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVF-SPSEDASGR 216 (345)
Q Consensus 139 ~~p~~VLiIG~G-~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~-~~l~~~~~~ 216 (345)
.+..+||++|+| .|..+..+++.. +.+|++++.+++-.+.+++ ++.. .++..+-. ++.+...+.
T Consensus 178 ~~g~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~-lGa~------------~v~~~~~~~~~~~~~~~~ 243 (360)
T 1piw_A 178 GPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDAMK-MGAD------------HYIATLEEGDWGEKYFDT 243 (360)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHH-HTCS------------EEEEGGGTSCHHHHSCSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHH-cCCC------------EEEcCcCchHHHHHhhcC
Confidence 456889999975 366677777654 4689999999999999987 4422 12221111 222222257
Q ss_pred ccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 217 YAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
+|+||--.... . + +.++.+.+.|+++|.++.
T Consensus 244 ~D~vid~~g~~-~-~------~~~~~~~~~l~~~G~iv~ 274 (360)
T 1piw_A 244 FDLIVVCASSL-T-D------IDFNIMPKAMKVGGRIVS 274 (360)
T ss_dssp EEEEEECCSCS-T-T------CCTTTGGGGEEEEEEEEE
T ss_pred CCEEEECCCCC-c-H------HHHHHHHHHhcCCCEEEE
Confidence 99998533220 0 0 123445678999998864
No 354
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=92.82 E-value=0.83 Score=45.01 Aligned_cols=102 Identities=14% Similarity=0.175 Sum_probs=63.2
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcC-----------CCCCCCCCCCCCcEEEEEcccc
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFG-----------LSDLEKPTATGGVLQVHIGDVF 207 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~-----------~~~~~~~~~~~~rv~v~~gDa~ 207 (345)
.++|.+||+| |+.++..+.+ .+.+|+++|++++.++.+++... +.... ......++ ..|.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~--~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~---~~~~~~~i-~~~~- 109 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFAR--VGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQA---SAKPKLRF-SSST- 109 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCC---CCCCCEEE-ESCG-
T ss_pred CCEEEEECcCHHHHHHHHHHHh--CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHH---HHHHHhhh-cCCH-
Confidence 3579999998 4455555554 36799999999998887665321 01000 01122333 3443
Q ss_pred cccccCCCcccEEEEcCCCCCCCCCCc-chHHHHHHHHhccCCCcEEEEEecC
Q 038076 208 SPSEDASGRYAGIVVDLFSEGKVLPQL-EEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 208 ~~l~~~~~~yD~Ii~D~f~~~~~p~~l-~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+- -+..|+||.-++ ..+ ...+.++.+...++|+-+++.|..+
T Consensus 110 ~~----~~~aDlVIeaVp------e~~~~k~~v~~~l~~~~~~~~ii~snTs~ 152 (463)
T 1zcj_A 110 KE----LSTVDLVVEAVF------EDMNLKKKVFAELSALCKPGAFLCTNTSA 152 (463)
T ss_dssp GG----GTTCSEEEECCC------SCHHHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred HH----HCCCCEEEEcCC------CCHHHHHHHHHHHHhhCCCCeEEEeCCCC
Confidence 21 246899998553 222 3467888899999999888765543
No 355
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=92.74 E-value=0.16 Score=46.94 Aligned_cols=87 Identities=16% Similarity=0.171 Sum_probs=57.5
Q ss_pred CCCCCEEEEeec-ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 139 VPNGPIAIYGLG-GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 139 ~~p~~VLiIG~G-~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
.+..+||++|+| .|.++.++++.. +.+|.+++ +++-.+.++++ +.. .++ .| .+- ..+.+
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~l-Ga~------------~v~-~d-~~~---v~~g~ 200 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVS-ASLSQALAAKR-GVR------------HLY-RE-PSQ---VTQKY 200 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHHH-TEE------------EEE-SS-GGG---CCSCE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHHc-CCC------------EEE-cC-HHH---hCCCc
Confidence 456899999985 377777777765 46999999 99989998873 421 122 35 222 26789
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
|+|+ |..... .+..+.+.|+++|.++.-
T Consensus 201 Dvv~-d~~g~~----------~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 201 FAIF-DAVNSQ----------NAAALVPSLKANGHIICI 228 (315)
T ss_dssp EEEE-CC-----------------TTGGGEEEEEEEEEE
T ss_pred cEEE-ECCCch----------hHHHHHHHhcCCCEEEEE
Confidence 9988 332211 124567889999998754
No 356
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=92.73 E-value=0.42 Score=44.48 Aligned_cols=93 Identities=11% Similarity=0.052 Sum_probs=61.3
Q ss_pred CCCCCEEEEee--cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE---ccccccccc-
Q 038076 139 VPNGPIAIYGL--GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI---GDVFSPSED- 212 (345)
Q Consensus 139 ~~p~~VLiIG~--G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~---gDa~~~l~~- 212 (345)
.+.++||+.|+ |-|..+..+++.. +.+|.+++.+++-.+.+.+.++.. .++. .|..+.+..
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~~g~~------------~~~~~~~~~~~~~~~~~ 214 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEELGFD------------GAIDYKNEDLAAGLKRE 214 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCCS------------EEEETTTSCHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCC------------EEEECCCHHHHHHHHHh
Confidence 46688999997 3566666766654 569999999999999885545432 1121 122222211
Q ss_pred CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 213 ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 213 ~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
..+.+|+|+..+ . .+.++.+.+.|+++|.++.
T Consensus 215 ~~~~~d~vi~~~-g----------~~~~~~~~~~l~~~G~iv~ 246 (336)
T 4b7c_A 215 CPKGIDVFFDNV-G----------GEILDTVLTRIAFKARIVL 246 (336)
T ss_dssp CTTCEEEEEESS-C----------HHHHHHHHTTEEEEEEEEE
T ss_pred cCCCceEEEECC-C----------cchHHHHHHHHhhCCEEEE
Confidence 345799988522 1 1468888899999999874
No 357
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=92.69 E-value=0.082 Score=49.62 Aligned_cols=93 Identities=18% Similarity=0.246 Sum_probs=60.2
Q ss_pred CCCCCEEEEeec-ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE---cccccccccCC
Q 038076 139 VPNGPIAIYGLG-GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI---GDVFSPSEDAS 214 (345)
Q Consensus 139 ~~p~~VLiIG~G-~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~---gDa~~~l~~~~ 214 (345)
.+.++||++|+| .|..+..+++.. +.+|++++.+++-.+.+++ ++... ++. .|..+.+....
T Consensus 163 ~~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~-lGa~~------------~~d~~~~~~~~~~~~~~ 228 (339)
T 1rjw_A 163 KPGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKE-LGADL------------VVNPLKEDAAKFMKEKV 228 (339)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH-TTCSE------------EECTTTSCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH-CCCCE------------EecCCCccHHHHHHHHh
Confidence 456789999985 366666777665 4699999999999999886 44211 111 11111111111
Q ss_pred CcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 215 GRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
+.+|+||-... ..+.++.+.+.|+++|.++.
T Consensus 229 ~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~v~ 259 (339)
T 1rjw_A 229 GGVHAAVVTAV----------SKPAFQSAYNSIRRGGACVL 259 (339)
T ss_dssp SSEEEEEESSC----------CHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCEEEECCC----------CHHHHHHHHHHhhcCCEEEE
Confidence 47999885321 12467888899999998763
No 358
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=92.68 E-value=0.28 Score=46.49 Aligned_cols=93 Identities=20% Similarity=0.268 Sum_probs=57.8
Q ss_pred CCCCEEEEeec-ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 140 PNGPIAIYGLG-GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 140 ~p~~VLiIG~G-~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
+..+||++|+| .|..+..+++.. +.+|++++.+++-.+.+++.++.. .++..+-.+.+....+.+|
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~lGa~------------~v~~~~~~~~~~~~~~~~D 253 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALKNFGAD------------SFLVSRDQEQMQAAAGTLD 253 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHHTSCCS------------EEEETTCHHHHHHTTTCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcCCc------------eEEeccCHHHHHHhhCCCC
Confidence 56789999975 356666666665 469999999999888887666532 1121111122332235799
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
+||--+... . .++.+.+.|+++|.++.
T Consensus 254 ~vid~~g~~----~------~~~~~~~~l~~~G~iv~ 280 (366)
T 1yqd_A 254 GIIDTVSAV----H------PLLPLFGLLKSHGKLIL 280 (366)
T ss_dssp EEEECCSSC----C------CSHHHHHHEEEEEEEEE
T ss_pred EEEECCCcH----H------HHHHHHHHHhcCCEEEE
Confidence 998533211 1 13455678899998763
No 359
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=92.65 E-value=0.59 Score=42.46 Aligned_cols=93 Identities=19% Similarity=0.187 Sum_probs=59.5
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
..+|.+||+| |+.++..+.+..++.+|.++|.+++..+.+++. +.. . ....|..+. -+..|
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~-g~~---------~---~~~~~~~~~----~~~aD 68 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALER-GIV---------D---EATADFKVF----AALAD 68 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHT-TSC---------S---EEESCTTTT----GGGCS
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHc-CCc---------c---cccCCHHHh----hcCCC
Confidence 3579999998 566777777654457899999999988876652 211 0 112232222 24689
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhc-cCCCcEEEEEec
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDR-LMPNGRFMVNCG 258 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~-L~pgGvlvvn~~ 258 (345)
+||+-+ |+. ...+.++.+... |+++.++ +++.
T Consensus 69 vVilav------p~~-~~~~v~~~l~~~~l~~~~iv-i~~~ 101 (290)
T 3b1f_A 69 VIILAV------PIK-KTIDFIKILADLDLKEDVII-TDAG 101 (290)
T ss_dssp EEEECS------CHH-HHHHHHHHHHTSCCCTTCEE-ECCC
T ss_pred EEEEcC------CHH-HHHHHHHHHHhcCCCCCCEE-EECC
Confidence 999843 322 236778888888 8876555 4543
No 360
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=92.62 E-value=1.5 Score=39.51 Aligned_cols=95 Identities=18% Similarity=0.183 Sum_probs=59.3
Q ss_pred CCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCC-ccc
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASG-RYA 218 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~-~yD 218 (345)
++|.+||+| |+.++..+.+.....+|.++|.+++..+.++++ +.. . . ...|..+.+ + ..|
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~-g~~---------~--~-~~~~~~~~~----~~~aD 64 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-GII---------D--E-GTTSIAKVE----DFSPD 64 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-TSC---------S--E-EESCGGGGG----GTCCS
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC-CCc---------c--c-ccCCHHHHh----cCCCC
Confidence 468999988 556666666531123899999999988877653 211 0 1 122332222 3 689
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
+|++-+ |+. ...+.++.+...++++.+ ++++.+..
T Consensus 65 vVilav------p~~-~~~~v~~~l~~~l~~~~i-v~~~~~~~ 99 (281)
T 2g5c_A 65 FVMLSS------PVR-TFREIAKKLSYILSEDAT-VTDQGSVK 99 (281)
T ss_dssp EEEECS------CHH-HHHHHHHHHHHHSCTTCE-EEECCSCC
T ss_pred EEEEcC------CHH-HHHHHHHHHHhhCCCCcE-EEECCCCc
Confidence 999843 222 445778888888988764 45655433
No 361
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.59 E-value=0.46 Score=38.14 Aligned_cols=68 Identities=10% Similarity=0.031 Sum_probs=46.1
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc--ccc-CCC
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP--SED-ASG 215 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~--l~~-~~~ 215 (345)
.++|+++|+| |..+++.|.+. +.+|+++|.|++.++.+++. ..+++.+|+.+- ++. .-+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~--g~~V~~id~~~~~~~~~~~~--------------~~~~~~gd~~~~~~l~~~~~~ 69 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAA--GKKVLAVDKSKEKIELLEDE--------------GFDAVIADPTDESFYRSLDLE 69 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHT--------------TCEEEECCTTCHHHHHHSCCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHC--------------CCcEEECCCCCHHHHHhCCcc
Confidence 3689999987 23344444442 57899999999988877652 246788888653 222 235
Q ss_pred cccEEEEcC
Q 038076 216 RYAGIVVDL 224 (345)
Q Consensus 216 ~yD~Ii~D~ 224 (345)
..|+|++-.
T Consensus 70 ~~d~vi~~~ 78 (141)
T 3llv_A 70 GVSAVLITG 78 (141)
T ss_dssp TCSEEEECC
T ss_pred cCCEEEEec
Confidence 799998743
No 362
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=92.59 E-value=0.35 Score=46.39 Aligned_cols=101 Identities=15% Similarity=0.215 Sum_probs=58.7
Q ss_pred CCCCEEEEeec-ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 140 PNGPIAIYGLG-GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 140 ~p~~VLiIG~G-~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
++++|+++|+| .|..+...++.+ +.+|+++|.+++-.+.+++.++.. +.+...+..+ +...-+..|
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~~~l~~~~~~~g~~-----------~~~~~~~~~~-l~~~l~~aD 233 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGM-GATVTVLDINIDKLRQLDAEFCGR-----------IHTRYSSAYE-LEGAVKRAD 233 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTTS-----------SEEEECCHHH-HHHHHHHCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhcCCe-----------eEeccCCHHH-HHHHHcCCC
Confidence 46889999986 333333444444 469999999999988888766522 1121111111 111123689
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
+|+.-+..+....+.+.+.+ ..+.++|||++ +|+.
T Consensus 234 vVi~~~~~p~~~t~~li~~~----~l~~mk~g~~i-V~va 268 (377)
T 2vhw_A 234 LVIGAVLVPGAKAPKLVSNS----LVAHMKPGAVL-VDIA 268 (377)
T ss_dssp EEEECCCCTTSCCCCCBCHH----HHTTSCTTCEE-EEGG
T ss_pred EEEECCCcCCCCCcceecHH----HHhcCCCCcEE-EEEe
Confidence 99975433322123344444 44568888876 5776
No 363
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.45 E-value=0.97 Score=42.97 Aligned_cols=103 Identities=16% Similarity=0.118 Sum_probs=61.1
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
..+|.+||+| |+.++..+.+. +.+|+.++.+++.++..++.-..+.........+++++ ..|..+. -+..|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~--G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~-t~d~~ea----~~~aD 101 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK--GQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKA-YCDLKAS----LEGVT 101 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT--TCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEE-ESCHHHH----HTTCC
T ss_pred CCeEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEE-ECCHHHH----HhcCC
Confidence 4689999998 45566666543 46899999999988876653211100000001223332 2333222 24689
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
+||+-+ |.. ...+.++.++..|+|+-+++ ++.
T Consensus 102 vVilaV------p~~-~~~~vl~~i~~~l~~~~ivv-s~~ 133 (356)
T 3k96_A 102 DILIVV------PSF-AFHEVITRMKPLIDAKTRIA-WGT 133 (356)
T ss_dssp EEEECC------CHH-HHHHHHHHHGGGCCTTCEEE-ECC
T ss_pred EEEECC------CHH-HHHHHHHHHHHhcCCCCEEE-EEe
Confidence 999843 322 56788899999998876654 443
No 364
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=92.45 E-value=0.1 Score=49.85 Aligned_cols=94 Identities=12% Similarity=-0.003 Sum_probs=60.9
Q ss_pred CCCCCEEEEeec-ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEc------ccccccc
Q 038076 139 VPNGPIAIYGLG-GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIG------DVFSPSE 211 (345)
Q Consensus 139 ~~p~~VLiIG~G-~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~g------Da~~~l~ 211 (345)
.+..+||++|+| .|..+.++++.....+|++++.+++-.+.++++ +.. .++.. |..+.+.
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l-Ga~------------~vi~~~~~~~~~~~~~v~ 260 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI-GAD------------LTLNRRETSVEERRKAIM 260 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT-TCS------------EEEETTTSCHHHHHHHHH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc-CCc------------EEEeccccCcchHHHHHH
Confidence 345789999965 466777777765436999999999999999863 421 12221 2112222
Q ss_pred c-C-CCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 212 D-A-SGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 212 ~-~-~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
. . ...+|+||--.-. .+.++.+.+.|+++|.++.
T Consensus 261 ~~~~g~g~Dvvid~~g~----------~~~~~~~~~~l~~~G~iv~ 296 (380)
T 1vj0_A 261 DITHGRGADFILEATGD----------SRALLEGSELLRRGGFYSV 296 (380)
T ss_dssp HHTTTSCEEEEEECSSC----------TTHHHHHHHHEEEEEEEEE
T ss_pred HHhCCCCCcEEEECCCC----------HHHHHHHHHHHhcCCEEEE
Confidence 1 2 3479999843211 1357778889999999864
No 365
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=92.36 E-value=0.69 Score=43.01 Aligned_cols=95 Identities=13% Similarity=0.079 Sum_probs=58.3
Q ss_pred CCCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEE-----Eccccccccc
Q 038076 140 PNGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVH-----IGDVFSPSED 212 (345)
Q Consensus 140 ~p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~-----~gDa~~~l~~ 212 (345)
...+|++||+| |+.++..|.+. +.+|+.+ .+++.++..++. ++.. ..+..... ..|. +
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~--G~~V~l~-~~~~~~~~i~~~-g~~~------~~~~~~~~~~~~~~~~~----~- 82 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARA--GHEVILI-ARPQHVQAIEAT-GLRL------ETQSFDEQVKVSASSDP----S- 82 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHT--TCEEEEE-CCHHHHHHHHHH-CEEE------ECSSCEEEECCEEESCG----G-
T ss_pred cCCcEEEECcCHHHHHHHHHHHHC--CCeEEEE-EcHhHHHHHHhC-CeEE------EcCCCcEEEeeeeeCCH----H-
Confidence 35789999998 55666666653 5689999 999888776653 1110 01111111 1222 1
Q ss_pred CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 213 ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 213 ~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
.-+.+|+||+-+ +.. ...+.++.++..++|+.+++..
T Consensus 83 ~~~~~D~vilav------k~~-~~~~~l~~l~~~l~~~~~iv~~ 119 (318)
T 3hwr_A 83 AVQGADLVLFCV------KST-DTQSAALAMKPALAKSALVLSL 119 (318)
T ss_dssp GGTTCSEEEECC------CGG-GHHHHHHHHTTTSCTTCEEEEE
T ss_pred HcCCCCEEEEEc------ccc-cHHHHHHHHHHhcCCCCEEEEe
Confidence 125799999843 222 4578899999999988766543
No 366
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.25 E-value=0.54 Score=44.84 Aligned_cols=97 Identities=9% Similarity=0.081 Sum_probs=62.7
Q ss_pred CCCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 140 PNGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 140 ~p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
+..+|.+||+| |..++..+.+. +.+|+++|.+++-++...+. +.. ...|..+.++. .++.
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~--G~~V~v~dr~~~~~~~l~~~-g~~--------------~~~s~~e~~~~-a~~~ 82 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKG--GHECVVYDLNVNAVQALERE-GIA--------------GARSIEEFCAK-LVKP 82 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTT-TCB--------------CCSSHHHHHHH-SCSS
T ss_pred cCCEEEEECchHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHC-CCE--------------EeCCHHHHHhc-CCCC
Confidence 45689999998 55667666653 57899999999988766543 111 11233333322 2456
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
|+||+-+ |.. ...+.++.+...|++|-+ ++++.+...
T Consensus 83 DvVi~~v------p~~-~v~~vl~~l~~~l~~g~i-iId~st~~~ 119 (358)
T 4e21_A 83 RVVWLMV------PAA-VVDSMLQRMTPLLAANDI-VIDGGNSHY 119 (358)
T ss_dssp CEEEECS------CGG-GHHHHHHHHGGGCCTTCE-EEECSSCCH
T ss_pred CEEEEeC------CHH-HHHHHHHHHHhhCCCCCE-EEeCCCCCh
Confidence 9999844 333 567788888888887655 457665553
No 367
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=92.18 E-value=0.062 Score=50.50 Aligned_cols=92 Identities=13% Similarity=0.095 Sum_probs=59.6
Q ss_pred CCCCEEEEeecc-cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE---ccccccccc-CC
Q 038076 140 PNGPIAIYGLGG-GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI---GDVFSPSED-AS 214 (345)
Q Consensus 140 ~p~~VLiIG~G~-G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~---gDa~~~l~~-~~ 214 (345)
+..+||++|+|+ |..+..+++.....+|++++.+++-.+.++++ . .. ++. .|..+.+.. ..
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a-~~------------v~~~~~~~~~~~~~~~~~ 229 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-A-DR------------LVNPLEEDLLEVVRRVTG 229 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-C-SE------------EECTTTSCHHHHHHHHHS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-H-Hh------------ccCcCccCHHHHHHHhcC
Confidence 678999999853 66677777765433899999999988887764 2 11 111 121111211 24
Q ss_pred CcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 215 GRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
..+|+||--. . ..+.++.+.+.|+++|.++.
T Consensus 230 ~g~D~vid~~-g---------~~~~~~~~~~~l~~~G~iv~ 260 (343)
T 2dq4_A 230 SGVEVLLEFS-G---------NEAAIHQGLMALIPGGEARI 260 (343)
T ss_dssp SCEEEEEECS-C---------CHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCEEEECC-C---------CHHHHHHHHHHHhcCCEEEE
Confidence 5799998422 1 13567888899999998764
No 368
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.18 E-value=0.2 Score=48.46 Aligned_cols=109 Identities=19% Similarity=0.271 Sum_probs=60.2
Q ss_pred CCCCEEEEeec-ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEE--EEccc----------
Q 038076 140 PNGPIAIYGLG-GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQV--HIGDV---------- 206 (345)
Q Consensus 140 ~p~~VLiIG~G-~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v--~~gDa---------- 206 (345)
++.+|++||+| .|..+..+++.. +.+|+++|.+++..+.+++. +.... +-.+.- ..+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~l-Ga~~~------~l~~~~~~~~gya~~~~~~~~~~ 254 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL-GAKTTGYDVRPEVAEQVRSV-GAQWL------DLGIDAAGEGGYARELSEAERAQ 254 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSGGGHHHHHHT-TCEEC------CCC-------------CHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-CCeEE------eccccccccccchhhhhHHHHhh
Confidence 67899999998 444444444443 46999999999998888773 32100 000000 00000
Q ss_pred -ccccccCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 207 -FSPSEDASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 207 -~~~l~~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
..-+...-+..|+||.-+..+....+.+.+.+.+ +.++||+++ +++....
T Consensus 255 ~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv----~~MkpGsVI-VDvA~d~ 305 (381)
T 3p2y_A 255 QQQALEDAITKFDIVITTALVPGRPAPRLVTAAAA----TGMQPGSVV-VDLAGET 305 (381)
T ss_dssp HHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHH----HTSCTTCEE-EETTGGG
T ss_pred hHHHHHHHHhcCCEEEECCCCCCcccceeecHHHH----hcCCCCcEE-EEEeCCC
Confidence 0011122378999997654433333456776555 456776654 5776433
No 369
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=92.10 E-value=0.11 Score=48.29 Aligned_cols=81 Identities=20% Similarity=0.123 Sum_probs=53.6
Q ss_pred CcccEEEEcCCCCCCCCCCcch----HH-----HHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHH
Q 038076 215 GRYAGIVVDLFSEGKVLPQLEE----VA-----TWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSA 285 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~~~p~~l~t----~e-----f~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~ 285 (345)
++||+|++|.-.+.. .+-|. ++ ....+.++|+|||.+++-++.... +....+
T Consensus 205 ~k~DvV~SDMApn~s--Gh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~KvyggaD-----------------r~se~l 265 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYK--YHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYAD-----------------RASESI 265 (320)
T ss_dssp CCEEEEEEECCCCCC--SCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCCS-----------------HHHHHH
T ss_pred CcCCEEEEcCCCCCC--CccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCCc-----------------ccHHHH
Confidence 779999999755322 11111 11 455678899999999999997764 356889
Q ss_pred HHHHHHHCCCCEEEEEec-C-CCCceEEEEeC
Q 038076 286 IRALSEAFPGKVSWKRMP-E-RNGENFLALTG 315 (345)
Q Consensus 286 ~~~l~~~F~~~v~~~~~~-~-~~~~n~v~~a~ 315 (345)
+..|++.|. .|...+=+ . ...+.++++.+
T Consensus 266 v~~LaR~F~-~Vr~vKP~ASR~StEvf~La~g 296 (320)
T 2hwk_A 266 IGAIARQFK-FSRVCKPKSSLEETEVLFVFIG 296 (320)
T ss_dssp HHHHHTTEE-EEEEECCTTCCSTTCEEEEEEE
T ss_pred HHHHHHhcc-eeeeeCCCCccccceEEEEEEe
Confidence 999999999 66643311 1 23345555554
No 370
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.09 E-value=0.5 Score=43.12 Aligned_cols=106 Identities=15% Similarity=0.194 Sum_probs=63.6
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhc------------CCCCCCCCCCCCCcEEEEEccc
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYF------------GLSDLEKPTATGGVLQVHIGDV 206 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f------------~~~~~~~~~~~~~rv~v~~gDa 206 (345)
.++|.+||+| |..++..+.+. +.+|+++|.+++.++.+++.. ++..... .....+++. ..|.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~-~~~~~~i~~-~~~~ 79 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH--GFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAA-QKALGGIRY-SDDL 79 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHH-HHHHHHCEE-ESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHH-HHHHcCeEE-eCCH
Confidence 3689999988 44555555543 679999999999988877652 1111000 000012222 2232
Q ss_pred ccccccCCCcccEEEEcCCCCCCCCCCc-chHHHHHHHHhccCCCcEEEEEecCC
Q 038076 207 FSPSEDASGRYAGIVVDLFSEGKVLPQL-EEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 207 ~~~l~~~~~~yD~Ii~D~f~~~~~p~~l-~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
.+. -+..|+||.-+ |+.+ ...+.++.+...++|+.+++.|..+.
T Consensus 80 ~~~----~~~aDlVi~av------~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~ 124 (283)
T 4e12_A 80 AQA----VKDADLVIEAV------PESLDLKRDIYTKLGELAPAKTIFATNSSTL 124 (283)
T ss_dssp HHH----TTTCSEEEECC------CSCHHHHHHHHHHHHHHSCTTCEEEECCSSS
T ss_pred HHH----hccCCEEEEec------cCcHHHHHHHHHHHHhhCCCCcEEEECCCCC
Confidence 221 25689999744 3322 45678889999999988887665543
No 371
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=91.92 E-value=1.2 Score=44.08 Aligned_cols=114 Identities=15% Similarity=0.121 Sum_probs=65.0
Q ss_pred CCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCC------CCCCcEEEEEcccccccccC
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPT------ATGGVLQVHIGDVFSPSEDA 213 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~------~~~~rv~v~~gDa~~~l~~~ 213 (345)
.+|.+||+| |+.++..+.+..++.+|+++|+|++.++..++.- .+-.+... ....++++ ..|..+-
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~-~~i~e~gl~~~~~~~~~~~l~~-t~~~~~~---- 83 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDK-LPIYEPGLDEIVFAARGRNLFF-SSDIPKA---- 83 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSS-CSSCCTTHHHHHHHHBTTTEEE-ESCHHHH----
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCC-CCcCCCCHHHHHHHhhcCCEEE-ECCHHHH----
Confidence 589999999 5667777777655679999999999988765421 11000000 00012221 1222111
Q ss_pred CCcccEEEEcCCCCCCC-------CCCc-chHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 214 SGRYAGIVVDLFSEGKV-------LPQL-EEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 214 ~~~yD~Ii~D~f~~~~~-------p~~l-~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
-+..|+||+-+.++... .+.+ +..+.++.+.+.|+++-++ ++..+...
T Consensus 84 ~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iV-V~~STv~~ 139 (481)
T 2o3j_A 84 IAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIV-VEKSTVPV 139 (481)
T ss_dssp HHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEE-EECSCCCT
T ss_pred hhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEE-EECCCCCC
Confidence 13579999976554210 0111 3466778888889886554 56544443
No 372
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.90 E-value=0.24 Score=48.24 Aligned_cols=106 Identities=13% Similarity=0.144 Sum_probs=61.4
Q ss_pred CCCCEEEEeec-ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccc---ccc------
Q 038076 140 PNGPIAIYGLG-GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDV---FSP------ 209 (345)
Q Consensus 140 ~p~~VLiIG~G-~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa---~~~------ 209 (345)
++.+|++||+| .|..+..+++.. +.+|+++|+++...+.+++. +..... - .+. ...|+ ..|
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~~-G~~~~~-----~-~~~-~~~d~~~~~~ya~e~s~ 259 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL-GAVVSATDVRPAAKEQVASL-GAKFIA-----V-EDE-EFKAAETAGGYAKEMSG 259 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSTTHHHHHHHT-TCEECC-----C-CC------------------C
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHc-CCceee-----c-ccc-cccccccccchhhhcch
Confidence 57899999998 455554555554 57999999999999888873 421100 0 000 00010 001
Q ss_pred ---------cccCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 210 ---------SEDASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 210 ---------l~~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+.+.-+..|+||.-+..++...+.+.+.+.+ +.++||.++ +++..
T Consensus 260 ~~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv----~~Mk~GsVI-VDvA~ 313 (405)
T 4dio_A 260 EYQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREML----DSMKPGSVV-VDLAV 313 (405)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHH----TTSCTTCEE-EETTG
T ss_pred hhhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHH----hcCCCCCEE-EEEeC
Confidence 1111257899997665554444567776544 567777665 56654
No 373
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=91.46 E-value=0.19 Score=46.85 Aligned_cols=92 Identities=11% Similarity=0.102 Sum_probs=60.5
Q ss_pred CCCCCEEEEee--cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE---ccccccccc-
Q 038076 139 VPNGPIAIYGL--GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI---GDVFSPSED- 212 (345)
Q Consensus 139 ~~p~~VLiIG~--G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~---gDa~~~l~~- 212 (345)
.+.++||++|+ |.|..+..+++.. +.+|.+++.+++-.+.++++ +.. .++. .|..+.+..
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~-ga~------------~~~~~~~~~~~~~~~~~ 212 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKEY-GAE------------YLINASKEDILRQVLKF 212 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT-TCS------------EEEETTTSCHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-CCc------------EEEeCCCchHHHHHHHH
Confidence 45678999994 4566676777664 57999999999999998874 321 1222 122222221
Q ss_pred -CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 213 -ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 213 -~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
..+.+|+|+-.+-. +.++.+.+.|+++|.++.
T Consensus 213 ~~~~g~D~vid~~g~-----------~~~~~~~~~l~~~G~iv~ 245 (334)
T 3qwb_A 213 TNGKGVDASFDSVGK-----------DTFEISLAALKRKGVFVS 245 (334)
T ss_dssp TTTSCEEEEEECCGG-----------GGHHHHHHHEEEEEEEEE
T ss_pred hCCCCceEEEECCCh-----------HHHHHHHHHhccCCEEEE
Confidence 24579998853211 357778889999999875
No 374
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=91.41 E-value=0.77 Score=42.73 Aligned_cols=94 Identities=10% Similarity=0.055 Sum_probs=61.0
Q ss_pred CCCCCEEEEee--cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEc---cccccccc-
Q 038076 139 VPNGPIAIYGL--GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIG---DVFSPSED- 212 (345)
Q Consensus 139 ~~p~~VLiIG~--G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~g---Da~~~l~~- 212 (345)
.+.++||+.|+ |.|..+..+++.. +.+|.+++.+++-.+.+++.++.. ..+-.. |..+.+..
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~~g~~-----------~~~d~~~~~~~~~~~~~~ 221 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKFGFD-----------DAFNYKEESDLTAALKRC 221 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTSCCS-----------EEEETTSCSCSHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCc-----------eEEecCCHHHHHHHHHHH
Confidence 45678999996 4566666666654 469999999999999888555521 111111 22222221
Q ss_pred CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 213 ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 213 ~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
.++.+|+|+... . .+.++.+.+.|+++|.+++
T Consensus 222 ~~~~~d~vi~~~-g----------~~~~~~~~~~l~~~G~~v~ 253 (345)
T 2j3h_A 222 FPNGIDIYFENV-G----------GKMLDAVLVNMNMHGRIAV 253 (345)
T ss_dssp CTTCEEEEEESS-C----------HHHHHHHHTTEEEEEEEEE
T ss_pred hCCCCcEEEECC-C----------HHHHHHHHHHHhcCCEEEE
Confidence 235799998532 1 1467888899999999874
No 375
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=91.36 E-value=1.3 Score=41.77 Aligned_cols=122 Identities=12% Similarity=-0.021 Sum_probs=80.5
Q ss_pred CCEEEEeecccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc--CCCccc
Q 038076 142 GPIAIYGLGGGTAAHLMLDLW-PSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED--ASGRYA 218 (345)
Q Consensus 142 ~~VLiIG~G~G~~~~~l~~~~-p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~--~~~~yD 218 (345)
-+++++-+|.|.+...+.+.- +...+.++|+|+...+.-+.+|+. ..++.+|..+.... ....+|
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~------------~~~~~~DI~~~~~~~~~~~~~D 71 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE------------TNLLNRNIQQLTPQVIKKWNVD 71 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------------SCEECCCGGGCCHHHHHHTTCC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC------------CceeccccccCCHHHhccCCCC
Confidence 479999999999998887652 225688999999999999998852 23667898886432 123699
Q ss_pred EEEEcCCCCCC--------C--CCCcchHHHHHHHHhccC-CCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHH
Q 038076 219 GIVVDLFSEGK--------V--LPQLEEVATWLKLKDRLM-PNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIR 287 (345)
Q Consensus 219 ~Ii~D~f~~~~--------~--p~~l~t~ef~~~~~~~L~-pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~ 287 (345)
+|+...+..+. . +..-.-.++++ +.+.++ |.=+++=|+.+-... ...+.+++
T Consensus 72 ~l~ggpPCQ~fS~ag~~~~~~d~r~~L~~~~~r-~i~~~~~P~~~vlENV~gl~~~----------------~~~~~i~~ 134 (333)
T 4h0n_A 72 TILMSPPCQPFTRNGKYLDDNDPRTNSFLYLIG-ILDQLDNVDYILMENVKGFENS----------------TVRNLFID 134 (333)
T ss_dssp EEEECCCCCCSEETTEECCTTCTTSCCHHHHHH-HGGGCTTCCEEEEEECTTGGGS----------------HHHHHHHH
T ss_pred EEEecCCCcchhhhhhccCCcCcccccHHHHHH-HHHHhcCCCEEEEecchhhhhh----------------hHHHHHHH
Confidence 99976544321 1 11111234444 444565 998888898865431 34566777
Q ss_pred HHHHH
Q 038076 288 ALSEA 292 (345)
Q Consensus 288 ~l~~~ 292 (345)
.|.+.
T Consensus 135 ~l~~~ 139 (333)
T 4h0n_A 135 KLKEC 139 (333)
T ss_dssp HHHHT
T ss_pred HHHhC
Confidence 77653
No 376
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=91.14 E-value=0.42 Score=44.43 Aligned_cols=93 Identities=9% Similarity=0.081 Sum_probs=58.1
Q ss_pred CCCCCEEEEee--cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE---ccccccccc-
Q 038076 139 VPNGPIAIYGL--GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI---GDVFSPSED- 212 (345)
Q Consensus 139 ~~p~~VLiIG~--G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~---gDa~~~l~~- 212 (345)
.+.++||+.|+ |.|..+..+++.. +.+|.+++.+++-.+.+++ ++.. ..+-. .|..+.+..
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~-~g~~-----------~~~d~~~~~~~~~~~~~~ 210 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQ-IGFD-----------AAFNYKTVNSLEEALKKA 210 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH-TTCS-----------EEEETTSCSCHHHHHHHH
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-cCCc-----------EEEecCCHHHHHHHHHHH
Confidence 45678999997 4455555555544 5699999999999988855 3321 11111 121122221
Q ss_pred CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 213 ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 213 ~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
..+.+|+++..+- .+.++.+.+.|+++|.+++
T Consensus 211 ~~~~~d~vi~~~g-----------~~~~~~~~~~l~~~G~~v~ 242 (333)
T 1v3u_A 211 SPDGYDCYFDNVG-----------GEFLNTVLSQMKDFGKIAI 242 (333)
T ss_dssp CTTCEEEEEESSC-----------HHHHHHHHTTEEEEEEEEE
T ss_pred hCCCCeEEEECCC-----------hHHHHHHHHHHhcCCEEEE
Confidence 2357999985331 1347788899999998864
No 377
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.07 E-value=0.26 Score=47.34 Aligned_cols=44 Identities=16% Similarity=0.323 Sum_probs=33.0
Q ss_pred CCCCEEEEeec-ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcC
Q 038076 140 PNGPIAIYGLG-GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFG 185 (345)
Q Consensus 140 ~p~~VLiIG~G-~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~ 185 (345)
++.+|+++|+| .|..+..+++.++ .+|+++|.++...+.+++ ++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G-a~V~~~d~~~~~~~~~~~-~G 215 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLG-AVVMATDVRAATKEQVES-LG 215 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCSTTHHHHHH-TT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHH-cC
Confidence 57899999987 4554555555554 689999999988887776 44
No 378
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=91.05 E-value=1.7 Score=43.07 Aligned_cols=111 Identities=13% Similarity=0.056 Sum_probs=65.6
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCC---C----CCCcEEEEEcccccccc
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPT---A----TGGVLQVHIGDVFSPSE 211 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~---~----~~~rv~v~~gDa~~~l~ 211 (345)
..+|.+||+| |..++..+.+. +.+|+++|+|++.++..++.- .+-.+... . ...++++ ..|..+-
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~--G~~V~~~d~~~~~v~~l~~~~-~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~a-- 81 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI--GHDVFCLDVDQAKIDILNNGG-VPIHEPGLKEVIARNRSAGRLRF-STDIEAA-- 81 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTC-CSSCCTTHHHHHHHHHHTTCEEE-ECCHHHH--
T ss_pred CceEEEECcCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHCCC-CCcCCCCHHHHHHHhcccCCEEE-ECCHHHH--
Confidence 4689999999 55666666653 568999999999998877642 11100000 0 0112322 1222111
Q ss_pred cCCCcccEEEEcCCCCC---CCCCCcchHHHHHHHHhccCCCcEEEEEecCC
Q 038076 212 DASGRYAGIVVDLFSEG---KVLPQLEEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 212 ~~~~~yD~Ii~D~f~~~---~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
-+..|+||+-+..+. ..|.--+..+.++.+...|+++-++ ++..+.
T Consensus 82 --~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iV-V~~STv 130 (478)
T 2y0c_A 82 --VAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVI-VDKSTV 130 (478)
T ss_dssp --HHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEE-EECSCC
T ss_pred --hhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEE-EEeCCc
Confidence 135899999775532 1222235667788888889886555 666543
No 379
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=90.94 E-value=0.13 Score=48.40 Aligned_cols=94 Identities=17% Similarity=0.231 Sum_probs=59.2
Q ss_pred CCCCCEEEEeecc--cHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc---ccc-
Q 038076 139 VPNGPIAIYGLGG--GTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP---SED- 212 (345)
Q Consensus 139 ~~p~~VLiIG~G~--G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~---l~~- 212 (345)
.+.++||+.|+|+ |..+..+++...+.+|.+++.+++-.+.+++. +.. .++...-.++ +..
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~-g~~------------~~~~~~~~~~~~~~~~~ 235 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA-GAD------------YVINASMQDPLAEIRRI 235 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH-TCS------------EEEETTTSCHHHHHHHH
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-CCC------------EEecCCCccHHHHHHHH
Confidence 4567899999873 44555555554357999999999999988764 321 1111111111 221
Q ss_pred CC-CcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 213 AS-GRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 213 ~~-~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
.. +.+|+||..+-. .+.++.+.+.|+++|.++.
T Consensus 236 ~~~~~~d~vi~~~g~----------~~~~~~~~~~l~~~G~iv~ 269 (347)
T 1jvb_A 236 TESKGVDAVIDLNNS----------EKTLSVYPKALAKQGKYVM 269 (347)
T ss_dssp TTTSCEEEEEESCCC----------HHHHTTGGGGEEEEEEEEE
T ss_pred hcCCCceEEEECCCC----------HHHHHHHHHHHhcCCEEEE
Confidence 22 489999853211 2467778899999998864
No 380
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=90.87 E-value=0.22 Score=46.35 Aligned_cols=92 Identities=18% Similarity=0.162 Sum_probs=60.0
Q ss_pred CCCCCEEEEee--cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEc---cccccccc-
Q 038076 139 VPNGPIAIYGL--GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIG---DVFSPSED- 212 (345)
Q Consensus 139 ~~p~~VLiIG~--G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~g---Da~~~l~~- 212 (345)
.+.++||++|+ |.|..+..+++.. +.+|.+++.+++-.+.+++. +.. .++.. |..+.+.+
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~-Ga~------------~~~~~~~~~~~~~~~~~ 204 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKAL-GAW------------ETIDYSHEDVAKRVLEL 204 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHH-TCS------------EEEETTTSCHHHHHHHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-CCC------------EEEeCCCccHHHHHHHH
Confidence 45678999993 4566666777654 56999999999999999874 321 11211 22222211
Q ss_pred -CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 213 -ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 213 -~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
..+.+|+|+-.+ .. +.++.+.+.|+++|.++.
T Consensus 205 ~~~~g~Dvvid~~-g~----------~~~~~~~~~l~~~G~iv~ 237 (325)
T 3jyn_A 205 TDGKKCPVVYDGV-GQ----------DTWLTSLDSVAPRGLVVS 237 (325)
T ss_dssp TTTCCEEEEEESS-CG----------GGHHHHHTTEEEEEEEEE
T ss_pred hCCCCceEEEECC-Ch----------HHHHHHHHHhcCCCEEEE
Confidence 235799988532 11 356778899999999875
No 381
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=90.81 E-value=0.95 Score=44.98 Aligned_cols=107 Identities=17% Similarity=0.122 Sum_probs=67.3
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcC-----CCCCCCCC-----CCCCcEEEEEccccc
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFG-----LSDLEKPT-----ATGGVLQVHIGDVFS 208 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~-----~~~~~~~~-----~~~~rv~v~~gDa~~ 208 (345)
.++|.+||+| |+.++..+.+. +.+|+++|++++.++.+++... +....... ..-.+++.. .|. +
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~-~ 80 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASH--GHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV-TDI-H 80 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE-CCG-G
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe-CCH-H
Confidence 3689999998 56667666653 5789999999999988766420 11000000 000134332 232 1
Q ss_pred ccccCCCcccEEEEcCCCCCCCCCCc-chHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 209 PSEDASGRYAGIVVDLFSEGKVLPQL-EEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 209 ~l~~~~~~yD~Ii~D~f~~~~~p~~l-~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
- -+.-|+||.-++ +.+ ...+.++++.+.++|+.+++.|..+.+
T Consensus 81 ~----~~~aDlVIeAVp------e~~~vk~~v~~~l~~~~~~~~IlasntSti~ 124 (483)
T 3mog_A 81 A----LAAADLVIEAAS------ERLEVKKALFAQLAEVCPPQTLLTTNTSSIS 124 (483)
T ss_dssp G----GGGCSEEEECCC------CCHHHHHHHHHHHHHHSCTTCEEEECCSSSC
T ss_pred H----hcCCCEEEEcCC------CcHHHHHHHHHHHHHhhccCcEEEecCCCCC
Confidence 1 246799997543 332 346789999999999999988877654
No 382
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=90.77 E-value=1.8 Score=40.73 Aligned_cols=131 Identities=11% Similarity=-0.040 Sum_probs=81.2
Q ss_pred CCCEEEEeecccHHHHHHHHhC-CCCEE-EEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc--CCCc
Q 038076 141 NGPIAIYGLGGGTAAHLMLDLW-PSLKL-EGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED--ASGR 216 (345)
Q Consensus 141 p~~VLiIG~G~G~~~~~l~~~~-p~~~v-~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~--~~~~ 216 (345)
+-+++++-||.|.+...+.+.- +...+ .++|+|+...+..+.+|+. . ++.+|.++.... ....
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~----------~---~~~~DI~~~~~~~i~~~~ 76 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE----------E---VQVKNLDSISIKQIESLN 76 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC----------C---CBCCCTTTCCHHHHHHTC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC----------C---cccCChhhcCHHHhccCC
Confidence 4589999999999998887641 12456 7999999999999998851 1 556788776432 1236
Q ss_pred ccEEEEcCCCCCC------CC---CCcch---HHHHHHHHhcc--CCCcEEEEEecCCCCCCccccCCCCCCCccchHHH
Q 038076 217 YAGIVVDLFSEGK------VL---PQLEE---VATWLKLKDRL--MPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMH 282 (345)
Q Consensus 217 yD~Ii~D~f~~~~------~p---~~l~t---~ef~~~~~~~L--~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~ 282 (345)
+|+|+...+..+. .- ..--. .++++.+.+.+ +|.=+++=|+.+-... ..+
T Consensus 77 ~Dil~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~~~----------------~~~ 140 (327)
T 3qv2_A 77 CNTWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFKES----------------LVF 140 (327)
T ss_dssp CCEEEECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGGGS----------------HHH
T ss_pred CCEEEecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhcCh----------------HHH
Confidence 8999975543221 00 00011 12222133456 7888888898765431 356
Q ss_pred HHHHHHHHHHCCCCEEEEE
Q 038076 283 NSAIRALSEAFPGKVSWKR 301 (345)
Q Consensus 283 ~~~~~~l~~~F~~~v~~~~ 301 (345)
+.+++.|.+. .-.+.+..
T Consensus 141 ~~i~~~l~~~-GY~v~~~v 158 (327)
T 3qv2_A 141 KEIYNILIKN-QYYIKDII 158 (327)
T ss_dssp HHHHHHHHHT-TCEEEEEE
T ss_pred HHHHHHHHhC-CCEEEEEE
Confidence 6777777654 32344443
No 383
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=90.74 E-value=0.93 Score=40.81 Aligned_cols=89 Identities=20% Similarity=0.118 Sum_probs=57.5
Q ss_pred CEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccEE
Q 038076 143 PIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAGI 220 (345)
Q Consensus 143 ~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~I 220 (345)
+|.+||+| |+.++..+.+. +.+|+++|.+++-.+.++++ +.. . + ...|. ... +..|+|
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~-g~~---------~--~-~~~~~----~~~-~~~D~v 61 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR--GHYLIGVSRQQSTCEKAVER-QLV---------D--E-AGQDL----SLL-QTAKII 61 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT-TSC---------S--E-EESCG----GGG-TTCSEE
T ss_pred EEEEEcCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHhC-CCC---------c--c-ccCCH----HHh-CCCCEE
Confidence 68899988 45566666653 45899999999988876653 221 1 1 12232 223 578999
Q ss_pred EEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 221 VVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 221 i~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
++-+ |+. ...+.++.+...++++.++ +++.+
T Consensus 62 i~av------~~~-~~~~~~~~l~~~~~~~~~v-v~~~~ 92 (279)
T 2f1k_A 62 FLCT------PIQ-LILPTLEKLIPHLSPTAIV-TDVAS 92 (279)
T ss_dssp EECS------CHH-HHHHHHHHHGGGSCTTCEE-EECCS
T ss_pred EEEC------CHH-HHHHHHHHHHhhCCCCCEE-EECCC
Confidence 9844 222 4567888888888887655 67643
No 384
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=90.66 E-value=1.9 Score=42.38 Aligned_cols=111 Identities=13% Similarity=0.083 Sum_probs=64.0
Q ss_pred CCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCC--------CCcEEEEEcccccccc
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTAT--------GGVLQVHIGDVFSPSE 211 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~--------~~rv~v~~gDa~~~l~ 211 (345)
.+|.+||+| |..++..+.+. +.+|+++|+|++.++..++.. ......... ..++++ ..|..+.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~--G~~V~~~D~~~~~v~~l~~g~--~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea~- 76 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL--GANVRCIDTDRNKIEQLNSGT--IPIYEPGLEKMIARNVKAGRLRF-GTEIEQAV- 76 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTC--SCCCSTTHHHHHHHHHHTTSEEE-ESCHHHHG-
T ss_pred CEEEEECcCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHcCC--CcccCCCHHHHHHhhcccCcEEE-ECCHHHHH-
Confidence 479999998 55666666653 579999999999988776622 110000000 123332 23332222
Q ss_pred cCCCcccEEEEcCCCCCC---CCCCcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 212 DASGRYAGIVVDLFSEGK---VLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 212 ~~~~~yD~Ii~D~f~~~~---~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
+..|+||+-+..+.. -+.--+-.+.++.+.+.|+++- ++++..+...
T Consensus 77 ---~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~-iVV~~STv~p 126 (450)
T 3gg2_A 77 ---PEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYI-LIVTKSTVPV 126 (450)
T ss_dssp ---GGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCE-EEEECSCCCT
T ss_pred ---hcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCC-EEEEeeeCCC
Confidence 457999987655421 1111244567788888887754 4556655443
No 385
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=90.58 E-value=0.34 Score=47.02 Aligned_cols=43 Identities=16% Similarity=0.265 Sum_probs=32.4
Q ss_pred CCCCEEEEeec-ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh
Q 038076 140 PNGPIAIYGLG-GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDY 183 (345)
Q Consensus 140 ~p~~VLiIG~G-~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~ 183 (345)
++.+|+++|+| .|..+..+++.++ .+|+++|.++...+.+++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G-a~V~v~D~~~~~~~~~~~l 214 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLG-AIVRAFDTRPEVKEQVQSM 214 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCGGGHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHc
Confidence 47899999987 4544555555554 6999999999988887653
No 386
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=90.50 E-value=0.79 Score=42.68 Aligned_cols=100 Identities=14% Similarity=0.117 Sum_probs=57.4
Q ss_pred CCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCC--CCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLS--DLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~--~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
.+|.+||+| |+.++..+.+. +.+|++++.+++.++..++..+.. ... . ....++.....|..+. -+.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~----~~~~ 76 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDRGAIIAEGPG-L-AGTAHPDLLTSDIGLA----VKDA 76 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHTSEEEESSS-C-CEEECCSEEESCHHHH----HTTC
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHhcCCeEEeccc-c-ccccccceecCCHHHH----HhcC
Confidence 589999998 34555555542 468999999998887766543211 000 0 0000010112222221 2468
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEe
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
|+|++-+.. . ...+.++.+...|+++.++ +++
T Consensus 77 D~vi~~v~~------~-~~~~~~~~l~~~l~~~~~v-v~~ 108 (359)
T 1bg6_A 77 DVILIVVPA------I-HHASIAANIASYISEGQLI-ILN 108 (359)
T ss_dssp SEEEECSCG------G-GHHHHHHHHGGGCCTTCEE-EES
T ss_pred CEEEEeCCc------h-HHHHHHHHHHHhCCCCCEE-EEc
Confidence 999985432 1 2467888898889887654 444
No 387
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=90.44 E-value=1 Score=41.39 Aligned_cols=95 Identities=16% Similarity=0.132 Sum_probs=57.9
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
..+|.+||+| |..++..+.+. +.+|+++|.+++-++...+. +. .....|..+. -+..|
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~-g~-------------~~~~~~~~e~----~~~aD 66 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA--GLSTWGADLNPQACANLLAE-GA-------------CGAAASAREF----AGVVD 66 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT-TC-------------SEEESSSTTT----TTTCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHc-CC-------------ccccCCHHHH----HhcCC
Confidence 4579999998 55666666653 57899999999988876653 11 1112333332 24579
Q ss_pred EEEEcCCCCCCCCCCcchHHHH---HHHHhccCCCcEEEEEecCCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATW---LKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~---~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
+||+-+.+. ....+.+ +.+...|+++.++ +++.+...
T Consensus 67 vvi~~vp~~------~~~~~v~~~~~~l~~~l~~g~iv-v~~st~~~ 106 (303)
T 3g0o_A 67 ALVILVVNA------AQVRQVLFGEDGVAHLMKPGSAV-MVSSTISS 106 (303)
T ss_dssp EEEECCSSH------HHHHHHHC--CCCGGGSCTTCEE-EECSCCCH
T ss_pred EEEEECCCH------HHHHHHHhChhhHHhhCCCCCEE-EecCCCCH
Confidence 999854331 1223333 4455667776554 67765443
No 388
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.40 E-value=0.82 Score=43.52 Aligned_cols=103 Identities=13% Similarity=0.103 Sum_probs=55.1
Q ss_pred CCCCEEEEeec-ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 140 PNGPIAIYGLG-GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 140 ~p~~VLiIG~G-~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
++++|+++|+| .|..+...++.. +.+|+++|.+++-.+.+++.++. .+.....+..+ +...-+..|
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~-Ga~V~~~d~~~~~~~~~~~~~g~-----------~~~~~~~~~~~-l~~~~~~~D 231 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGM-GAQVTILDVNHKRLQYLDDVFGG-----------RVITLTATEAN-IKKSVQHAD 231 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTT-----------SEEEEECCHHH-HHHHHHHCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHhcCc-----------eEEEecCCHHH-HHHHHhCCC
Confidence 46899999985 233333333343 46999999999988877765541 12222222111 111124689
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
+|+.-+.......+.+.+.+ +.+.++++|++ +|+...
T Consensus 232 vVi~~~g~~~~~~~~li~~~----~l~~mk~gg~i-V~v~~~ 268 (369)
T 2eez_A 232 LLIGAVLVPGAKAPKLVTRD----MLSLMKEGAVI-VDVAVD 268 (369)
T ss_dssp EEEECCC-------CCSCHH----HHTTSCTTCEE-EECC--
T ss_pred EEEECCCCCccccchhHHHH----HHHhhcCCCEE-EEEecC
Confidence 99875543221112333443 44667888875 566543
No 389
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=90.20 E-value=1 Score=41.74 Aligned_cols=98 Identities=11% Similarity=0.115 Sum_probs=64.7
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++|.+||+| |+.++..++ . +.+|+++|.+++.++.+.+.+ .+ ..-.+++.. .|... -+.-|
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a--G~~V~v~d~~~~~~~~~~~~l--~~-----~~~~~i~~~-~~~~~-----~~~aD 75 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S--KHEVVLQDVSEKALEAAREQI--PE-----ELLSKIEFT-TTLEK-----VKDCD 75 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCHHHHHHHHHHS--CG-----GGGGGEEEE-SSCTT-----GGGCS
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c--CCEEEEEECCHHHHHHHHHHH--HH-----HHhCCeEEe-CCHHH-----HcCCC
Confidence 5789999999 667777766 3 679999999999999888873 11 001244432 33322 24679
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
+||.-++... -...++|..+... |+.+++.|..+..
T Consensus 76 lVieavpe~~-----~vk~~l~~~l~~~--~~~IlasntSti~ 111 (293)
T 1zej_A 76 IVMEAVFEDL-----NTKVEVLREVERL--TNAPLCSNTSVIS 111 (293)
T ss_dssp EEEECCCSCH-----HHHHHHHHHHHTT--CCSCEEECCSSSC
T ss_pred EEEEcCcCCH-----HHHHHHHHHHhcC--CCCEEEEECCCcC
Confidence 9997543321 1245677776555 8888888887654
No 390
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=90.18 E-value=1.2 Score=40.93 Aligned_cols=107 Identities=13% Similarity=0.098 Sum_probs=62.3
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhc----------CCCCCC-----CCCCCCCcEEEEE
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYF----------GLSDLE-----KPTATGGVLQVHI 203 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f----------~~~~~~-----~~~~~~~rv~v~~ 203 (345)
.++|.+||+| |..++..+.+. +.+|+++|.+++.++.+++.. +.-... .......++++.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~--G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~- 91 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT--GHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS- 91 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEe-
Confidence 3679999998 34566666653 579999999999888764422 100000 000000133332
Q ss_pred cccccccccCCCcccEEEEcCCCCCCCCCCc-chHHHHHHHHhccCCCcEEEEEecCC
Q 038076 204 GDVFSPSEDASGRYAGIVVDLFSEGKVLPQL-EEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 204 gDa~~~l~~~~~~yD~Ii~D~f~~~~~p~~l-~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
.|..+ .-+..|+||.-+ |..+ ...++++.+...++|+.+++.|..+.
T Consensus 92 ~~~~~----~~~~aD~Vi~av------p~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i 139 (302)
T 1f0y_A 92 TDAAS----VVHSTDLVVEAI------VENLKVKNELFKRLDKFAAEHTIFASNTSSL 139 (302)
T ss_dssp SCHHH----HTTSCSEEEECC------CSCHHHHHHHHHHHTTTSCTTCEEEECCSSS
T ss_pred cCHHH----hhcCCCEEEEcC------cCcHHHHHHHHHHHHhhCCCCeEEEECCCCC
Confidence 23221 124689999854 3322 24578888888898888776565543
No 391
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=90.12 E-value=0.2 Score=46.84 Aligned_cols=92 Identities=13% Similarity=0.126 Sum_probs=57.5
Q ss_pred CCCCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEc---cccccccc-
Q 038076 139 VPNGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIG---DVFSPSED- 212 (345)
Q Consensus 139 ~~p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~g---Da~~~l~~- 212 (345)
.+.++||++|+| .|..+..+++.. +.+|.+++.+++-.+.+++. +.. .++.. |..+.+..
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l-ga~------------~~~~~~~~~~~~~~~~~ 208 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLRL-GAA------------YVIDTSTAPLYETVMEL 208 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHH-TCS------------EEEETTTSCHHHHHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhC-CCc------------EEEeCCcccHHHHHHHH
Confidence 456889999986 456666666654 56999999999999998884 321 12211 22221211
Q ss_pred -CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 213 -ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 213 -~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
....+|+|+-.+-. +......+.|+++|.++.
T Consensus 209 ~~~~g~Dvvid~~g~-----------~~~~~~~~~l~~~G~iv~ 241 (340)
T 3gms_A 209 TNGIGADAAIDSIGG-----------PDGNELAFSLRPNGHFLT 241 (340)
T ss_dssp TTTSCEEEEEESSCH-----------HHHHHHHHTEEEEEEEEE
T ss_pred hCCCCCcEEEECCCC-----------hhHHHHHHHhcCCCEEEE
Confidence 23579998852211 122334478999999874
No 392
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=89.87 E-value=1.5 Score=39.15 Aligned_cols=91 Identities=12% Similarity=0.111 Sum_probs=57.5
Q ss_pred CCEEEEeec--ccHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLWPSLK-LEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~p~~~-v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+|.+||+| |..++..+.+. +.+ |.++|.+++-.+...+.++. ++ ..|..+. -+..|
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~~~~~~~~~~~~~~g~-------------~~-~~~~~~~----~~~~D 70 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK--GFRIVQVYSRTEESARELAQKVEA-------------EY-TTDLAEV----NPYAK 70 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSHHHHHHHHHHTTC-------------EE-ESCGGGS----CSCCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCC-------------ce-eCCHHHH----hcCCC
Confidence 589999998 44566666654 344 89999999988776665431 11 2333332 24689
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
+|++-+ |+. ...+.++.+...++++-++ +++.+.
T Consensus 71 vvi~av------~~~-~~~~v~~~l~~~~~~~~iv-v~~s~~ 104 (266)
T 3d1l_A 71 LYIVSL------KDS-AFAELLQGIVEGKREEALM-VHTAGS 104 (266)
T ss_dssp EEEECC------CHH-HHHHHHHHHHTTCCTTCEE-EECCTT
T ss_pred EEEEec------CHH-HHHHHHHHHHhhcCCCcEE-EECCCC
Confidence 999843 222 2367788888778776555 455443
No 393
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=89.76 E-value=0.36 Score=45.70 Aligned_cols=92 Identities=13% Similarity=0.026 Sum_probs=61.4
Q ss_pred CCCCCEEEEe--ecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEc---cccccccc-
Q 038076 139 VPNGPIAIYG--LGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIG---DVFSPSED- 212 (345)
Q Consensus 139 ~~p~~VLiIG--~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~g---Da~~~l~~- 212 (345)
.+.++||++| +|.|..+..+++.. +.+|.+++.+++-.+.+++ ++.. .++.. |..+.+..
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~-~Ga~------------~~~~~~~~~~~~~~~~~ 227 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKS-LGCD------------RPINYKTEPVGTVLKQE 227 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH-TTCS------------EEEETTTSCHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHH-cCCc------------EEEecCChhHHHHHHHh
Confidence 4567899999 45677777777765 5699999999999999887 3421 11211 21122221
Q ss_pred CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 213 ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 213 ~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
..+.+|+||--. . .+.++.+.+.|+++|.++.
T Consensus 228 ~~~g~D~vid~~-g----------~~~~~~~~~~l~~~G~iv~ 259 (362)
T 2c0c_A 228 YPEGVDVVYESV-G----------GAMFDLAVDALATKGRLIV 259 (362)
T ss_dssp CTTCEEEEEECS-C----------THHHHHHHHHEEEEEEEEE
T ss_pred cCCCCCEEEECC-C----------HHHHHHHHHHHhcCCEEEE
Confidence 345799998432 1 1467888899999998764
No 394
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=89.73 E-value=0.58 Score=43.70 Aligned_cols=92 Identities=12% Similarity=0.074 Sum_probs=59.4
Q ss_pred CCCCCEEEEee--cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEc---cccccccc-
Q 038076 139 VPNGPIAIYGL--GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIG---DVFSPSED- 212 (345)
Q Consensus 139 ~~p~~VLiIG~--G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~g---Da~~~l~~- 212 (345)
.+.++||++|+ |.|..+..+++.. +.+|++++.+++-.+.++++ +.. .++.- |..+.+.+
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~-ga~------------~~~d~~~~~~~~~~~~~ 230 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKAL-GAD------------ETVNYTHPDWPKEVRRL 230 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH-TCS------------EEEETTSTTHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc-CCC------------EEEcCCcccHHHHHHHH
Confidence 35678999997 4566666777665 46999999999999998763 321 11211 11111221
Q ss_pred -CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 213 -ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 213 -~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
....+|+||..+- . +.++.+.+.|+++|.++.
T Consensus 231 ~~~~~~d~vi~~~g-~----------~~~~~~~~~l~~~G~~v~ 263 (343)
T 2eih_A 231 TGGKGADKVVDHTG-A----------LYFEGVIKATANGGRIAI 263 (343)
T ss_dssp TTTTCEEEEEESSC-S----------SSHHHHHHHEEEEEEEEE
T ss_pred hCCCCceEEEECCC-H----------HHHHHHHHhhccCCEEEE
Confidence 2357999985432 1 136777889999998764
No 395
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=89.72 E-value=0.4 Score=44.91 Aligned_cols=92 Identities=16% Similarity=0.103 Sum_probs=60.3
Q ss_pred CCCCCEEEEee--cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEc--cccccccc--
Q 038076 139 VPNGPIAIYGL--GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIG--DVFSPSED-- 212 (345)
Q Consensus 139 ~~p~~VLiIG~--G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~g--Da~~~l~~-- 212 (345)
.+.++||++|+ |.|..+..+++.. +.+|.+++.+++-.+.+++. +.. .++.. |..+.+..
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~-ga~------------~v~~~~~~~~~~v~~~~ 223 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSV-GAD------------IVLPLEEGWAKAVREAT 223 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHH-TCS------------EEEESSTTHHHHHHHHT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc-CCc------------EEecCchhHHHHHHHHh
Confidence 45678999996 4567777777765 56999999999999998884 321 12222 22222221
Q ss_pred CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 213 ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 213 ~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
..+.+|+|+-.+-. +.++.+.+.|+++|.++.
T Consensus 224 ~~~g~Dvvid~~g~-----------~~~~~~~~~l~~~G~iv~ 255 (342)
T 4eye_A 224 GGAGVDMVVDPIGG-----------PAFDDAVRTLASEGRLLV 255 (342)
T ss_dssp TTSCEEEEEESCC-------------CHHHHHHTEEEEEEEEE
T ss_pred CCCCceEEEECCch-----------hHHHHHHHhhcCCCEEEE
Confidence 23479999853211 136778889999999874
No 396
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=89.67 E-value=2.2 Score=38.58 Aligned_cols=96 Identities=16% Similarity=0.107 Sum_probs=56.0
Q ss_pred CCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccc--ccCC---
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPS--EDAS--- 214 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l--~~~~--- 214 (345)
.+|.+||+| |+.++..+.+. +.+|++++.+++.++..++. +.... ..+.. ..... ... .+..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~-g~~~~-----~~~~~--~~~~~-~~~~~~~~~~~~ 72 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG--GNDVTLIDQWPAHIEAIRKN-GLIAD-----FNGEE--VVANL-PIFSPEEIDHQN 72 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHH-CEEEE-----ETTEE--EEECC-CEECGGGCCTTS
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHhC-CEEEE-----eCCCe--eEecc-eeecchhhcccC
Confidence 479999998 45566666553 46899999999888766654 21100 00000 00000 000 1112
Q ss_pred CcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 215 GRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
+.+|+||+-+. +. ...+.++.+...|+++.+++.
T Consensus 73 ~~~d~vi~~v~------~~-~~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 73 EQVDLIIALTK------AQ-QLDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp CCCSEEEECSC------HH-HHHHHHHHHGGGCCTTCEEEE
T ss_pred CCCCEEEEEec------cc-cHHHHHHHHHHhcCCCCEEEE
Confidence 27999998442 21 357788889888988766553
No 397
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=89.51 E-value=0.39 Score=45.02 Aligned_cols=92 Identities=11% Similarity=0.104 Sum_probs=60.6
Q ss_pred CCCCEEEEee--cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE--ccccccccc-CC
Q 038076 140 PNGPIAIYGL--GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI--GDVFSPSED-AS 214 (345)
Q Consensus 140 ~p~~VLiIG~--G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~--gDa~~~l~~-~~ 214 (345)
+..+||++|+ |.|..+.++++.. +.+|++++.+++-.+.+++. +... ++. .|..+-+.. ..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l-Ga~~------------vi~~~~~~~~~~~~~~~ 215 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKKM-GADI------------VLNHKESLLNQFKTQGI 215 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHHH-TCSE------------EECTTSCHHHHHHHHTC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc-CCcE------------EEECCccHHHHHHHhCC
Confidence 5678999953 3466677777765 46999999999999999884 4221 111 121111211 34
Q ss_pred CcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 215 GRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
+.+|+|+--. -..+.++.+.+.|+++|.++.
T Consensus 216 ~g~Dvv~d~~----------g~~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 216 ELVDYVFCTF----------NTDMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp CCEEEEEESS----------CHHHHHHHHHHHEEEEEEEEE
T ss_pred CCccEEEECC----------CchHHHHHHHHHhccCCEEEE
Confidence 6799888421 124578889999999999864
No 398
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=89.50 E-value=0.37 Score=45.73 Aligned_cols=95 Identities=18% Similarity=0.208 Sum_probs=62.1
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.++|.+||+| |+++++.+.+. +.+|.++|.+++..+.+++. +. . ...|..+.++...+..|
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~--G~~V~~~dr~~~~~~~a~~~-G~-------------~-~~~~~~e~~~~a~~~aD 70 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAA--NHSVFGYNRSRSGAKSAVDE-GF-------------D-VSADLEATLQRAAAEDA 70 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHT-TC-------------C-EESCHHHHHHHHHHTTC
T ss_pred CCEEEEEeecHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc-CC-------------e-eeCCHHHHHHhcccCCC
Confidence 4689999999 77888888764 57899999999998887663 21 1 12333333322123469
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
+||+-+ |.. ...+.++.+... +|+ .+++++.+..
T Consensus 71 lVilav------P~~-~~~~vl~~l~~~-~~~-~iv~Dv~Svk 104 (341)
T 3ktd_A 71 LIVLAV------PMT-AIDSLLDAVHTH-APN-NGFTDVVSVK 104 (341)
T ss_dssp EEEECS------CHH-HHHHHHHHHHHH-CTT-CCEEECCSCS
T ss_pred EEEEeC------CHH-HHHHHHHHHHcc-CCC-CEEEEcCCCC
Confidence 999843 322 456777777764 655 6677776544
No 399
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=89.44 E-value=0.29 Score=46.32 Aligned_cols=90 Identities=13% Similarity=0.135 Sum_probs=56.2
Q ss_pred CCCEEEEeec-ccHHHHHHHHhCCCCEEEEEECCH---HHHHHHHHhcCCCCCCCCCCCCCcEEEEEc-ccccccccCCC
Q 038076 141 NGPIAIYGLG-GGTAAHLMLDLWPSLKLEGWEIDE---ILIDKVRDYFGLSDLEKPTATGGVLQVHIG-DVFSPSEDASG 215 (345)
Q Consensus 141 p~~VLiIG~G-~G~~~~~l~~~~p~~~v~~VEidp---~vi~~A~~~f~~~~~~~~~~~~~rv~v~~g-Da~~~l~~~~~ 215 (345)
.++||++|+| .|..+..+++.. +.+|++++.++ +-.+.++++ +.. .+ .. |..+.+.+...
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~~~-ga~----------~v---~~~~~~~~~~~~~~ 245 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-GLEVWMANRREPTEVEQTVIEET-KTN----------YY---NSSNGYDKLKDSVG 245 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-TCEEEEEESSCCCHHHHHHHHHH-TCE----------EE---ECTTCSHHHHHHHC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCccchHHHHHHHHh-CCc----------ee---chHHHHHHHHHhCC
Confidence 6789999984 255555666554 46999999998 777888764 321 11 11 11111211125
Q ss_pred cccEEEEcCCCCCCCCCCcchHHHH-HHHHhccCCCcEEEE
Q 038076 216 RYAGIVVDLFSEGKVLPQLEEVATW-LKLKDRLMPNGRFMV 255 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~~p~~l~t~ef~-~~~~~~L~pgGvlvv 255 (345)
.+|+||.-+... ..+ +.+.+.|+++|.++.
T Consensus 246 ~~d~vid~~g~~----------~~~~~~~~~~l~~~G~iv~ 276 (366)
T 2cdc_A 246 KFDVIIDATGAD----------VNILGNVIPLLGRNGVLGL 276 (366)
T ss_dssp CEEEEEECCCCC----------THHHHHHGGGEEEEEEEEE
T ss_pred CCCEEEECCCCh----------HHHHHHHHHHHhcCCEEEE
Confidence 799998533211 145 788899999998763
No 400
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=89.39 E-value=0.71 Score=42.87 Aligned_cols=99 Identities=14% Similarity=0.128 Sum_probs=55.9
Q ss_pred CCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh-cCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDY-FGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~-f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+|++||+| |+.++..|.+. +.+|+.++.++ . +..++. +.... ...+..++..-.+..-.+...+.+|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~-~-~~i~~~Gl~~~~-----~~~g~~~~~~~~~~~~~~~~~~~~D 73 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT--GHCVSVVSRSD-Y-ETVKAKGIRIRS-----ATLGDYTFRPAAVVRSAAELETKPD 73 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT--TCEEEEECSTT-H-HHHHHHCEEEEE-----TTTCCEEECCSCEESCGGGCSSCCS
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCh-H-HHHHhCCcEEee-----cCCCcEEEeeeeeECCHHHcCCCCC
Confidence 579999998 56666666653 56899999988 3 444432 11110 0012233210001111112235799
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
+||+-+... ...+.++.++..++++.+++.-
T Consensus 74 lVilavK~~-------~~~~~l~~l~~~l~~~t~Iv~~ 104 (320)
T 3i83_A 74 CTLLCIKVV-------EGADRVGLLRDAVAPDTGIVLI 104 (320)
T ss_dssp EEEECCCCC-------TTCCHHHHHTTSCCTTCEEEEE
T ss_pred EEEEecCCC-------ChHHHHHHHHhhcCCCCEEEEe
Confidence 999854332 2235788899999998776543
No 401
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=89.20 E-value=3.6 Score=40.87 Aligned_cols=126 Identities=7% Similarity=-0.108 Sum_probs=83.1
Q ss_pred CCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc---------
Q 038076 142 GPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED--------- 212 (345)
Q Consensus 142 ~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~--------- 212 (345)
-++++|=||.|.+...+.+. ....|.++|+|+..++.-+.+|+. .|...++.+|.+++...
T Consensus 89 ~~viDLFaG~GGlslG~~~a-G~~~v~avE~d~~A~~ty~~N~~~---------~p~~~~~~~DI~~i~~~~~~~~~~~~ 158 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESI-GGQCVFTSEWNKHAVRTYKANHYC---------DPATHHFNEDIRDITLSHQEGVSDEA 158 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTT-TEEEEEEECCCHHHHHHHHHHSCC---------CTTTCEEESCTHHHHCTTCTTSCHHH
T ss_pred ceEEEecCCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHhccc---------CCCcceeccchhhhhhccccccchhh
Confidence 57999999999999888753 234589999999999998888852 24456788999887521
Q ss_pred -------CCCcccEEEEcCCCCCC-CCC------------------CcchHHHHHHHHhccCCCcEEEEEecCCCCCCcc
Q 038076 213 -------ASGRYAGIVVDLFSEGK-VLP------------------QLEEVATWLKLKDRLMPNGRFMVNCGGIDGVSDM 266 (345)
Q Consensus 213 -------~~~~yD~Ii~D~f~~~~-~p~------------------~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~ 266 (345)
....+|+|+...+..+. ... .-.-.++++ +.+.++|.=+++=|+.+-...
T Consensus 159 ~~~~i~~~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~r-iI~~~rPk~fvlENV~gl~s~--- 234 (482)
T 3me5_A 159 AAEHIRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVR-IIDARRPAMFVLENVKNLKSH--- 234 (482)
T ss_dssp HHHHHHHHSCCCSEEEEECCCCCC------------------CTTTTSHHHHHHH-HHHHHCCSEEEEEEETTTTTG---
T ss_pred HHhhhhhcCCCCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHH-HHHHcCCcEEEEeCcHHHhcc---
Confidence 12468999876544321 000 001123333 344679998888899876541
Q ss_pred ccCCCCCCCccchHHHHHHHHHHHH
Q 038076 267 TYGAARPKSMNDVWMHNSAIRALSE 291 (345)
Q Consensus 267 ~~g~~~~~~~d~~~~~~~~~~~l~~ 291 (345)
++...++.+++.|.+
T Consensus 235 ----------~~g~~f~~i~~~L~~ 249 (482)
T 3me5_A 235 ----------DKGKTFRIIMQTLDE 249 (482)
T ss_dssp ----------GGGHHHHHHHHHHHH
T ss_pred ----------cCCcHHHHHHHHHhc
Confidence 112467777777765
No 402
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=89.04 E-value=3.6 Score=37.90 Aligned_cols=108 Identities=10% Similarity=0.133 Sum_probs=67.3
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCC-EEEEEECC--HHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCC
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSL-KLEGWEID--EILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASG 215 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~-~v~~VEid--p~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~ 215 (345)
..+|.+||+| |..++..+.+. +. +|+++|.+ ++..+.+++. + ++. ..|..+.+ +
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~--G~~~V~~~dr~~~~~~~~~~~~~-g-------------~~~-~~~~~e~~----~ 82 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA--GAIDMAAYDAASAESWRPRAEEL-G-------------VSC-KASVAEVA----G 82 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH--SCCEEEEECSSCHHHHHHHHHHT-T-------------CEE-CSCHHHHH----H
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCCeEEEEcCCCCHHHHHHHHHC-C-------------CEE-eCCHHHHH----h
Confidence 4689999998 55677777764 34 89999997 5777766552 1 111 12222222 3
Q ss_pred cccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHHCC
Q 038076 216 RYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEAFP 294 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~F~ 294 (345)
..|+||+-+... ...+.++.+...|+++-++ +++.+... .....+.+.+.+.++
T Consensus 83 ~aDvVi~~vp~~-------~~~~~~~~l~~~l~~~~iv-vd~st~~~-----------------~~~~~~~~~~~~~~~ 136 (312)
T 3qsg_A 83 ECDVIFSLVTAQ-------AALEVAQQAGPHLCEGALY-ADFTSCSP-----------------AVKRAIGDVISRHRP 136 (312)
T ss_dssp HCSEEEECSCTT-------THHHHHHHHGGGCCTTCEE-EECCCCCH-----------------HHHHHHHHHHHHHCT
T ss_pred cCCEEEEecCch-------hHHHHHHhhHhhcCCCCEE-EEcCCCCH-----------------HHHHHHHHHHHhhcC
Confidence 579999855332 2345678888888886654 56665443 345566666776654
No 403
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=88.85 E-value=0.63 Score=43.21 Aligned_cols=92 Identities=16% Similarity=0.047 Sum_probs=58.8
Q ss_pred CCCCCEEEEee--cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEc---cccccccc-
Q 038076 139 VPNGPIAIYGL--GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIG---DVFSPSED- 212 (345)
Q Consensus 139 ~~p~~VLiIG~--G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~g---Da~~~l~~- 212 (345)
.+.++||+.|+ |.|..+..+++.. +.+|.+++.+++-.+.+++. +.. . ++.- |..+-+.+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~-g~~-----------~-~~d~~~~~~~~~i~~~ 209 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARKL-GCH-----------H-TINYSTQDFAEVVREI 209 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH-TCS-----------E-EEETTTSCHHHHHHHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-CCC-----------E-EEECCCHHHHHHHHHH
Confidence 45678999995 4566666666654 46999999999888888773 321 1 1111 11111211
Q ss_pred -CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 213 -ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 213 -~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
....+|++|..+-. +.++.+.+.|+++|.++.
T Consensus 210 ~~~~~~d~vi~~~g~-----------~~~~~~~~~l~~~G~iv~ 242 (333)
T 1wly_A 210 TGGKGVDVVYDSIGK-----------DTLQKSLDCLRPRGMCAA 242 (333)
T ss_dssp HTTCCEEEEEECSCT-----------TTHHHHHHTEEEEEEEEE
T ss_pred hCCCCCeEEEECCcH-----------HHHHHHHHhhccCCEEEE
Confidence 23579999853311 246778889999998764
No 404
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=88.82 E-value=0.83 Score=41.78 Aligned_cols=91 Identities=12% Similarity=0.026 Sum_probs=59.3
Q ss_pred cCCCCCEEEEee--cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccc-ccccccCC
Q 038076 138 IVPNGPIAIYGL--GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDV-FSPSEDAS 214 (345)
Q Consensus 138 ~~~p~~VLiIG~--G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa-~~~l~~~~ 214 (345)
+.+.++||++|+ |.|..+..+++.. +.+|++++.+++-.+.+++ ++.. .++.-+- .++.+..
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~-~ga~------------~~~~~~~~~~~~~~~- 187 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLA-LGAE------------EAATYAEVPERAKAW- 187 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHH-TTCS------------EEEEGGGHHHHHHHT-
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-cCCC------------EEEECCcchhHHHHh-
Confidence 345688999997 3466666777665 4699999999998888876 3321 1222111 1222222
Q ss_pred CcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 215 GRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
+.+|+|+. ... +.++.+.+.|+++|.++.
T Consensus 188 ~~~d~vid-~g~-----------~~~~~~~~~l~~~G~~v~ 216 (302)
T 1iz0_A 188 GGLDLVLE-VRG-----------KEVEESLGLLAHGGRLVY 216 (302)
T ss_dssp TSEEEEEE-CSC-----------TTHHHHHTTEEEEEEEEE
T ss_pred cCceEEEE-CCH-----------HHHHHHHHhhccCCEEEE
Confidence 57999985 421 136778889999998764
No 405
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=88.70 E-value=2 Score=42.24 Aligned_cols=127 Identities=14% Similarity=0.100 Sum_probs=71.9
Q ss_pred CCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCC-------CCCcEEEEEccccccccc
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTA-------TGGVLQVHIGDVFSPSED 212 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~-------~~~rv~v~~gDa~~~l~~ 212 (345)
-++.+||+| |..++..+.+. +.+|+++|+|++.++..++.- .+-.+.... ...++++ ..|..+-+
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~--G~~V~~~D~~~~kv~~l~~g~-~~~~epgl~~~~~~~~~~g~l~~-ttd~~ea~-- 82 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDF--GHEVVCVDKDARKIELLHQNV-MPIYEPGLDALVASNVKAGRLSF-TTDLAEGV-- 82 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHTTTC-CSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHH--
T ss_pred eEEEEEcCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHhcCC-CCccCCCHHHHHHhhcccCCEEE-ECCHHHHH--
Confidence 478999999 44555566653 579999999999988766521 110000000 0123332 23332222
Q ss_pred CCCcccEEEEcCCCCC----CCCCCcchHHHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHH
Q 038076 213 ASGRYAGIVVDLFSEG----KVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRA 288 (345)
Q Consensus 213 ~~~~yD~Ii~D~f~~~----~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~ 288 (345)
+.-|+||+-+.++. ..|.--+-.+.++.+.+.|++|-++ ++..+.+. ...+.+.+.
T Consensus 83 --~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iV-V~~STv~p-----------------gtt~~l~~~ 142 (446)
T 4a7p_A 83 --KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVI-VTKSTVPV-----------------GTGDEVERI 142 (446)
T ss_dssp --TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEE-EECSCCCT-----------------THHHHHHHH
T ss_pred --hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEE-EEeCCCCc-----------------hHHHHHHHH
Confidence 45799998765542 1122123456778888889876555 55554443 235566666
Q ss_pred HHHHCC
Q 038076 289 LSEAFP 294 (345)
Q Consensus 289 l~~~F~ 294 (345)
+.+..+
T Consensus 143 l~e~~~ 148 (446)
T 4a7p_A 143 IAEVAP 148 (446)
T ss_dssp HHHHST
T ss_pred HHHhCC
Confidence 666654
No 406
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=88.63 E-value=0.5 Score=44.42 Aligned_cols=93 Identities=8% Similarity=0.011 Sum_probs=59.5
Q ss_pred CCC--CCEEEEee--cccHHHHHHHHhCCCC-EEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE---ccccccc
Q 038076 139 VPN--GPIAIYGL--GGGTAAHLMLDLWPSL-KLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI---GDVFSPS 210 (345)
Q Consensus 139 ~~p--~~VLiIG~--G~G~~~~~l~~~~p~~-~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~---gDa~~~l 210 (345)
.+. ++||+.|+ |.|..+..+++.. +. +|.+++.+++-.+.+++.++.. . ++. .|..+.+
T Consensus 157 ~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~~g~~-----------~-~~d~~~~~~~~~~ 223 (357)
T 2zb4_A 157 TAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSELGFD-----------A-AINYKKDNVAEQL 223 (357)
T ss_dssp CTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCCS-----------E-EEETTTSCHHHHH
T ss_pred CCCCccEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHcCCc-----------e-EEecCchHHHHHH
Confidence 355 78999997 3455555666554 45 9999999998888888755521 1 111 1111112
Q ss_pred cc-CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 211 ED-ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 211 ~~-~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
.. ..+.+|++|..+- .+.++.+.+.|+++|.++.
T Consensus 224 ~~~~~~~~d~vi~~~G-----------~~~~~~~~~~l~~~G~iv~ 258 (357)
T 2zb4_A 224 RESCPAGVDVYFDNVG-----------GNISDTVISQMNENSHIIL 258 (357)
T ss_dssp HHHCTTCEEEEEESCC-----------HHHHHHHHHTEEEEEEEEE
T ss_pred HHhcCCCCCEEEECCC-----------HHHHHHHHHHhccCcEEEE
Confidence 11 2237999885321 2567888899999999874
No 407
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=88.49 E-value=0.45 Score=44.60 Aligned_cols=93 Identities=17% Similarity=0.113 Sum_probs=59.0
Q ss_pred CCCCCEEEEee--cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE----ccccccccc
Q 038076 139 VPNGPIAIYGL--GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI----GDVFSPSED 212 (345)
Q Consensus 139 ~~p~~VLiIG~--G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~----gDa~~~l~~ 212 (345)
.+.++||++|+ |.|..+..+++.. +.+|++++.+++-.+.+++. +.. .++. .|..+.+..
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~~-g~~------------~~~d~~~~~~~~~~~~~ 233 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRSI-GGE------------VFIDFTKEKDIVGAVLK 233 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHHT-TCC------------EEEETTTCSCHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHHc-CCc------------eEEecCccHhHHHHHHH
Confidence 45678999998 3455565666554 46999999999888888763 321 1111 111122221
Q ss_pred -CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 213 -ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 213 -~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
.++.+|+|+...- ..+.++.+.+.|+++|.++.
T Consensus 234 ~~~~~~D~vi~~~g----------~~~~~~~~~~~l~~~G~iv~ 267 (347)
T 2hcy_A 234 ATDGGAHGVINVSV----------SEAAIEASTRYVRANGTTVL 267 (347)
T ss_dssp HHTSCEEEEEECSS----------CHHHHHHHTTSEEEEEEEEE
T ss_pred HhCCCCCEEEECCC----------cHHHHHHHHHHHhcCCEEEE
Confidence 1227999985331 13578888999999998763
No 408
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=88.41 E-value=0.72 Score=43.18 Aligned_cols=92 Identities=13% Similarity=0.042 Sum_probs=59.3
Q ss_pred CCCCCEEEEee--cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc--CC
Q 038076 139 VPNGPIAIYGL--GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED--AS 214 (345)
Q Consensus 139 ~~p~~VLiIG~--G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~--~~ 214 (345)
.+.++||++|+ |.|..+..+++.. +.+|.++ .+++-.+.+++. +.. . +. ...|..+.+.. ..
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~~l-Ga~---------~-i~-~~~~~~~~~~~~~~~ 214 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALAR-GARVFAT-ARGSDLEYVRDL-GAT---------P-ID-ASREPEDYAAEHTAG 214 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEE-ECHHHHHHHHHH-TSE---------E-EE-TTSCHHHHHHHHHTT
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEE-eCHHHHHHHHHc-CCC---------E-ec-cCCCHHHHHHHHhcC
Confidence 45688999994 3567777777764 5689999 899989988774 321 1 21 11122222211 34
Q ss_pred CcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 215 GRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
..+|+|+-.+ . .+.++.+.+.|+++|.++.
T Consensus 215 ~g~D~vid~~-g----------~~~~~~~~~~l~~~G~iv~ 244 (343)
T 3gaz_A 215 QGFDLVYDTL-G----------GPVLDASFSAVKRFGHVVS 244 (343)
T ss_dssp SCEEEEEESS-C----------THHHHHHHHHEEEEEEEEE
T ss_pred CCceEEEECC-C----------cHHHHHHHHHHhcCCeEEE
Confidence 5799888422 1 1367788889999999875
No 409
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=88.37 E-value=1.2 Score=40.63 Aligned_cols=89 Identities=12% Similarity=0.037 Sum_probs=58.5
Q ss_pred CCCEEEEeec--ccHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDL-WPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~-~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
..+|.+||+| |+.++..+.+. ++..+|+++|.+++-.+..++.++ +++ ..|..+.+ +..
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~g-------------i~~-~~~~~~~~----~~a 64 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCG-------------VHT-TQDNRQGA----LNA 64 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTC-------------CEE-ESCHHHHH----SSC
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcC-------------CEE-eCChHHHH----hcC
Confidence 3689999998 55666666654 223489999999998887776543 222 23333322 457
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhc-cCCCcEEE
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDR-LMPNGRFM 254 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~-L~pgGvlv 254 (345)
|+||+-+ ++ -...+.++.++.. ++++-+++
T Consensus 65 DvVilav------~p-~~~~~vl~~l~~~~l~~~~iii 95 (280)
T 3tri_A 65 DVVVLAV------KP-HQIKMVCEELKDILSETKILVI 95 (280)
T ss_dssp SEEEECS------CG-GGHHHHHHHHHHHHHTTTCEEE
T ss_pred CeEEEEe------CH-HHHHHHHHHHHhhccCCCeEEE
Confidence 9999854 22 2346788888888 87665555
No 410
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=88.30 E-value=0.42 Score=44.96 Aligned_cols=92 Identities=13% Similarity=0.038 Sum_probs=59.1
Q ss_pred CCCCCEEEEee--cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEc---cccccccc-
Q 038076 139 VPNGPIAIYGL--GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIG---DVFSPSED- 212 (345)
Q Consensus 139 ~~p~~VLiIG~--G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~g---Da~~~l~~- 212 (345)
.+.++||++|+ |.|..+..+++.. +.+|.+++.+++-.+.+++. +.. .++.. |..+.+..
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l-Ga~------------~~~~~~~~~~~~~~~~~ 231 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACERL-GAK------------RGINYRSEDFAAVIKAE 231 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH-TCS------------EEEETTTSCHHHHHHHH
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc-CCC------------EEEeCCchHHHHHHHHH
Confidence 45678999964 3566666777664 57999999999999999874 321 11211 11111111
Q ss_pred CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 213 ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 213 ~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
..+.+|+|+-.+ .. +.++.+.+.|+++|.++.
T Consensus 232 ~~~g~Dvvid~~-g~----------~~~~~~~~~l~~~G~iv~ 263 (353)
T 4dup_A 232 TGQGVDIILDMI-GA----------AYFERNIASLAKDGCLSI 263 (353)
T ss_dssp HSSCEEEEEESC-CG----------GGHHHHHHTEEEEEEEEE
T ss_pred hCCCceEEEECC-CH----------HHHHHHHHHhccCCEEEE
Confidence 246799988532 11 246778889999999764
No 411
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=88.23 E-value=0.88 Score=41.76 Aligned_cols=81 Identities=19% Similarity=0.264 Sum_probs=52.4
Q ss_pred CCcccEEEEcCCCCCCCCCCcc--------hHHH-HHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHH
Q 038076 214 SGRYAGIVVDLFSEGKVLPQLE--------EVAT-WLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNS 284 (345)
Q Consensus 214 ~~~yD~Ii~D~f~~~~~p~~l~--------t~ef-~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~ 284 (345)
-.+||+||+++-.+-. .|-| .... -....++|+|||.+++-..+.-. +..+.
T Consensus 209 ~grYDlVfvNv~TpyR--~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyAD-----------------R~SE~ 269 (324)
T 3trk_A 209 LGRYDLVVINIHTPFR--IHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYAD-----------------RTSER 269 (324)
T ss_dssp GCCEEEEEEECCCCCC--SSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCS-----------------HHHHH
T ss_pred CCceeEEEEecCCccc--cchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccc-----------------cchHH
Confidence 3899999999866422 2211 1111 22456789999999988776654 46788
Q ss_pred HHHHHHHHCCCCEEEEEecC---CCCceEEEEeC
Q 038076 285 AIRALSEAFPGKVSWKRMPE---RNGENFLALTG 315 (345)
Q Consensus 285 ~~~~l~~~F~~~v~~~~~~~---~~~~n~v~~a~ 315 (345)
++.++.+.|. .+.+.+ |. ++-+++++|..
T Consensus 270 vV~alARkF~-~~rv~~-P~cv~snTEv~~vF~~ 301 (324)
T 3trk_A 270 VICVLGRKFR-SSRALK-PPCVTSNTEMFFLFSN 301 (324)
T ss_dssp HHHHHHTTEE-EEEEEC-CTTCCBTTCEEEEEEE
T ss_pred HHHHHHhhhe-eeeeec-CccccccceEEEEEEe
Confidence 9999999998 555432 32 23345565553
No 412
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=88.23 E-value=3.5 Score=38.05 Aligned_cols=122 Identities=13% Similarity=0.002 Sum_probs=80.2
Q ss_pred CEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccEEEE
Q 038076 143 PIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAGIVV 222 (345)
Q Consensus 143 ~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~Ii~ 222 (345)
+|++|=+|.|.+..-+.+. +-..+-++|+|+..++.-+.+|+ -+++.+|..+.-...-...|+|+.
T Consensus 2 kvidLFsG~GG~~~G~~~a-G~~~v~a~e~d~~a~~ty~~N~~-------------~~~~~~DI~~i~~~~~~~~D~l~g 67 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA-GFRIICANEYDKSIWKTYESNHS-------------AKLIKGDISKISSDEFPKCDGIIG 67 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT-TCEEEEEEECCTTTHHHHHHHCC-------------SEEEESCGGGCCGGGSCCCSEEEC
T ss_pred eEEEeCcCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHHCC-------------CCcccCChhhCCHhhCCcccEEEe
Confidence 6899999999888877764 33567799999999999888874 147889998865444467899885
Q ss_pred cCCCCC----C----CCCC--cchHHHHHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHHHHHHHHHH
Q 038076 223 DLFSEG----K----VLPQ--LEEVATWLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNSAIRALSEA 292 (345)
Q Consensus 223 D~f~~~----~----~p~~--l~t~ef~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~l~~~ 292 (345)
-.+..+ + .-.. -.-.+++ .+.+.++|.-+++=|+.+--.. .. ...++.+++.|.+.
T Consensus 68 gpPCQ~fS~ag~~~g~~d~R~~L~~~~~-r~i~~~~Pk~~~~ENV~gl~~~---~~----------~~~~~~i~~~l~~~ 133 (331)
T 3ubt_Y 68 GPPSQSWSEGGSLRGIDDPRGKLFYEYI-RILKQKKPIFFLAENVKGMMAQ---RH----------NKAVQEFIQEFDNA 133 (331)
T ss_dssp CCCGGGTEETTEECCTTCGGGHHHHHHH-HHHHHHCCSEEEEEECCGGGGC---TT----------SHHHHHHHHHHHHH
T ss_pred cCCCCCcCCCCCccCCCCchhHHHHHHH-HHHhccCCeEEEeeeecccccc---cc----------cchhhhhhhhhccC
Confidence 432221 1 1111 1112333 3455689998888898754321 11 14677778888765
No 413
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=88.14 E-value=1.3 Score=40.69 Aligned_cols=88 Identities=17% Similarity=0.224 Sum_probs=59.3
Q ss_pred CEEEEee--cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc-CCCcccE
Q 038076 143 PIAIYGL--GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED-ASGRYAG 219 (345)
Q Consensus 143 ~VLiIG~--G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~-~~~~yD~ 219 (345)
+||++|+ |.|..+.++++.. +.+|++++.+++-.+.+++. +.. .++..+-...++. ....+|+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~l-Ga~------------~vi~~~~~~~~~~~~~~~~d~ 214 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKSL-GAN------------RILSRDEFAESRPLEKQLWAG 214 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHH-TCS------------EEEEGGGSSCCCSSCCCCEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc-CCC------------EEEecCCHHHHHhhcCCCccE
Confidence 5999996 4677888888775 46999999999999999874 422 1121111111222 3457998
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
|+ |... .+.++.+.+.|+++|.++.
T Consensus 215 v~-d~~g----------~~~~~~~~~~l~~~G~iv~ 239 (324)
T 3nx4_A 215 AI-DTVG----------DKVLAKVLAQMNYGGCVAA 239 (324)
T ss_dssp EE-ESSC----------HHHHHHHHHTEEEEEEEEE
T ss_pred EE-ECCC----------cHHHHHHHHHHhcCCEEEE
Confidence 76 4321 2378889999999999874
No 414
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=88.09 E-value=2.9 Score=41.02 Aligned_cols=114 Identities=12% Similarity=0.093 Sum_probs=63.2
Q ss_pred CCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCC---C---CCCcEEEEEcccccccccC
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPT---A---TGGVLQVHIGDVFSPSEDA 213 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~---~---~~~rv~v~~gDa~~~l~~~ 213 (345)
.+|.+||+| |+.++..+.+..++.+|+++|++++.++..++. ..+-.+... . ...+++. ..|..+-
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g-~~~i~e~~l~~~~~~~~~~~~~~-t~~~~e~---- 79 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSP-TLPIYEPGLKEVVESCRGKNLFF-STNIDDA---- 79 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSS-SCSSCCTTHHHHHHHHBTTTEEE-ESCHHHH----
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCC-CCCcCCCCHHHHHHHhhcCCEEE-ECCHHHH----
Confidence 579999999 556777777654467899999999988765432 111000000 0 0012221 1222111
Q ss_pred CCcccEEEEcCCCCCCC--------CCCcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 214 SGRYAGIVVDLFSEGKV--------LPQLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 214 ~~~yD~Ii~D~f~~~~~--------p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
-+..|+||+-+.++... +.--+..+..+.+.+.|++|. ++++..+...
T Consensus 80 ~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~-iVV~~STv~~ 135 (467)
T 2q3e_A 80 IKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYK-IVTEKSTVPV 135 (467)
T ss_dssp HHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEE-EEEECSCCCT
T ss_pred HhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCC-EEEECCcCCc
Confidence 13579999877554321 111123466777888888755 5567665443
No 415
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=88.09 E-value=0.41 Score=47.28 Aligned_cols=67 Identities=16% Similarity=0.188 Sum_probs=46.3
Q ss_pred CCCEEEEeecccHHHHHHHHhC--CCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc--ccc-CCC
Q 038076 141 NGPIAIYGLGGGTAAHLMLDLW--PSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP--SED-ASG 215 (345)
Q Consensus 141 p~~VLiIG~G~G~~~~~l~~~~--p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~--l~~-~~~ 215 (345)
..+|+++|+| .++..+.+.. .+..|++||.|++.++.+.+.++ +.+++||+.+. |+. .-+
T Consensus 3 ~M~iiI~G~G--~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~-------------~~~i~Gd~~~~~~L~~Agi~ 67 (461)
T 4g65_A 3 AMKIIILGAG--QVGGTLAENLVGENNDITIVDKDGDRLRELQDKYD-------------LRVVNGHASHPDVLHEAGAQ 67 (461)
T ss_dssp CEEEEEECCS--HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSS-------------CEEEESCTTCHHHHHHHTTT
T ss_pred cCEEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcC-------------cEEEEEcCCCHHHHHhcCCC
Confidence 3578888877 3333333332 35789999999999998777664 56899999874 333 346
Q ss_pred cccEEEE
Q 038076 216 RYAGIVV 222 (345)
Q Consensus 216 ~yD~Ii~ 222 (345)
..|+++.
T Consensus 68 ~ad~~ia 74 (461)
T 4g65_A 68 DADMLVA 74 (461)
T ss_dssp TCSEEEE
T ss_pred cCCEEEE
Confidence 7888775
No 416
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=87.97 E-value=0.98 Score=40.14 Aligned_cols=88 Identities=13% Similarity=0.145 Sum_probs=54.8
Q ss_pred CCEEEEeec--ccHHHHHHHHh--CCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 142 GPIAIYGLG--GGTAAHLMLDL--WPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~--~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
.+|.+||+| |+.+++.+.+. .+..+|.++|.+++-.+...+.++. + ...|..+.+ +..
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~-------------~-~~~~~~e~~----~~a 64 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGL-------------T-TTTDNNEVA----KNA 64 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCC-------------E-ECSCHHHHH----HHC
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCC-------------E-EeCChHHHH----HhC
Confidence 579999998 55677777653 1224899999999988877654442 1 112322322 358
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEE
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFM 254 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlv 254 (345)
|+||+-+. + -...+.++.+...++|+-+++
T Consensus 65 DvVilav~------~-~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 65 DILILSIK------P-DLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp SEEEECSC------T-TTHHHHC---CCSSCTTCEEE
T ss_pred CEEEEEeC------H-HHHHHHHHHHHhhcCCCCEEE
Confidence 99998551 1 134567777888888877665
No 417
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=87.93 E-value=2.1 Score=42.30 Aligned_cols=106 Identities=15% Similarity=0.111 Sum_probs=62.4
Q ss_pred CCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHH-HHH----HhcCCCCCCC--CCCCCCcEEEEEccccccccc
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILID-KVR----DYFGLSDLEK--PTATGGVLQVHIGDVFSPSED 212 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~-~A~----~~f~~~~~~~--~~~~~~rv~v~~gDa~~~l~~ 212 (345)
++|.+||+| |+.++..+++. +.+|+++|++++-.. ..+ +......... ....-.++++. .|. +
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t-~dl-~---- 126 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA--GIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKIT-SDF-H---- 126 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEE-SCG-G----
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEe-CCH-H----
Confidence 679999999 56677776653 689999999998110 001 1110000000 00001234432 232 1
Q ss_pred CCCcccEEEEcCCCCCCCCCCc-chHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 213 ASGRYAGIVVDLFSEGKVLPQL-EEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 213 ~~~~yD~Ii~D~f~~~~~p~~l-~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
.-+..|+||.-++. .+ ...+.|+++...++|+-+++.|..+.+
T Consensus 127 al~~aDlVIeAVpe------~~~vk~~v~~~l~~~~~~~aIlasnTSsl~ 170 (460)
T 3k6j_A 127 KLSNCDLIVESVIE------DMKLKKELFANLENICKSTCIFGTNTSSLD 170 (460)
T ss_dssp GCTTCSEEEECCCS------CHHHHHHHHHHHHTTSCTTCEEEECCSSSC
T ss_pred HHccCCEEEEcCCC------CHHHHHHHHHHHHhhCCCCCEEEecCCChh
Confidence 23568999985433 22 346788999999999999988877543
No 418
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=87.71 E-value=2.9 Score=41.51 Aligned_cols=102 Identities=14% Similarity=0.045 Sum_probs=64.2
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
..+|.+||+| |..++..+.+. +.+|++.|.+++.++...+.-. . +.++.. ..|..+.++. -+.-|
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~g~-~--------g~~i~~-~~s~~e~v~~-l~~aD 70 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDH--GFVVCAFNRTVSKVDDFLANEA-K--------GTKVVG-AQSLKEMVSK-LKKPR 70 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSTHHHHHHHHTTT-T--------TSSCEE-CSSHHHHHHT-BCSSC
T ss_pred CCEEEEEChhHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhccc-C--------CCceec-cCCHHHHHhh-ccCCC
Confidence 3589999998 56677777664 4689999999998887665321 1 112211 2333333321 23579
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
+|++-+ |..-...+.++.+...|++|-+ ++++.+...
T Consensus 71 vVil~V------p~~~~v~~vl~~l~~~L~~g~i-IId~st~~~ 107 (484)
T 4gwg_A 71 RIILLV------KAGQAVDDFIEKLVPLLDTGDI-IIDGGNSEY 107 (484)
T ss_dssp EEEECS------CSSHHHHHHHHHHGGGCCTTCE-EEECSCCCH
T ss_pred EEEEec------CChHHHHHHHHHHHHhcCCCCE-EEEcCCCCc
Confidence 999854 3323456778888888987655 567766553
No 419
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=87.67 E-value=2.3 Score=38.76 Aligned_cols=92 Identities=18% Similarity=0.243 Sum_probs=57.0
Q ss_pred CCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
.+|.+||+| |..++..+.+. +.+|+++|.+++-.+...+. + ++ ...|..+.+ +..|+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~--G~~V~~~d~~~~~~~~~~~~-g-------------~~-~~~~~~~~~----~~aDv 62 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA--GYLLNVFDLVQSAVDGLVAA-G-------------AS-AARSARDAV----QGADV 62 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHT-T-------------CE-ECSSHHHHH----TTCSE
T ss_pred CEEEEEeecHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHC-C-------------Ce-EcCCHHHHH----hCCCe
Confidence 579999999 55667776653 56899999999988776653 1 11 112222222 45799
Q ss_pred EEEcCCCCCCCCCCcchHHHHH---HHHhccCCCcEEEEEecCCC
Q 038076 220 IVVDLFSEGKVLPQLEEVATWL---KLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~---~~~~~L~pgGvlvvn~~~~~ 261 (345)
||+-+.. .....+.+. .+...++++.++ +++.+..
T Consensus 63 vi~~vp~------~~~~~~v~~~~~~~~~~l~~~~~v-i~~st~~ 100 (302)
T 2h78_A 63 VISMLPA------SQHVEGLYLDDDGLLAHIAPGTLV-LECSTIA 100 (302)
T ss_dssp EEECCSC------HHHHHHHHHSSSCGGGSSCSSCEE-EECSCCC
T ss_pred EEEECCC------HHHHHHHHcCchhHHhcCCCCcEE-EECCCCC
Confidence 9985432 223344555 566677776654 5665444
No 420
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=87.53 E-value=2.2 Score=33.56 Aligned_cols=68 Identities=16% Similarity=0.232 Sum_probs=39.9
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc--cccC-CC
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP--SEDA-SG 215 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~--l~~~-~~ 215 (345)
.++|+++|+| |..++..+.+ .+.+|+++|.+++-.+.+++ ....++.+|..+. +... -+
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~--~g~~v~~~d~~~~~~~~~~~--------------~~~~~~~~d~~~~~~l~~~~~~ 69 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHR--MGHEVLAVDINEEKVNAYAS--------------YATHAVIANATEENELLSLGIR 69 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TTCCCEEEESCHHHHHTTTT--------------TCSEEEECCTTCHHHHHTTTGG
T ss_pred CCcEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH--------------hCCEEEEeCCCCHHHHHhcCCC
Confidence 4689999975 1223333333 24689999999876553222 1134567776542 2221 35
Q ss_pred cccEEEEcC
Q 038076 216 RYAGIVVDL 224 (345)
Q Consensus 216 ~yD~Ii~D~ 224 (345)
.+|+|++-.
T Consensus 70 ~~d~vi~~~ 78 (144)
T 2hmt_A 70 NFEYVIVAI 78 (144)
T ss_dssp GCSEEEECC
T ss_pred CCCEEEECC
Confidence 799999744
No 421
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=87.37 E-value=1.1 Score=42.07 Aligned_cols=92 Identities=21% Similarity=0.146 Sum_probs=58.4
Q ss_pred CCCCCEEEEee--cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEc---cccccccc-
Q 038076 139 VPNGPIAIYGL--GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIG---DVFSPSED- 212 (345)
Q Consensus 139 ~~p~~VLiIG~--G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~g---Da~~~l~~- 212 (345)
.+.++||+.|+ |.|..+..+++.. +.+|.+++.+++-.+.+++. +.. .++.. |..+-+..
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~-ga~------------~~~d~~~~~~~~~~~~~ 234 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQN-GAH------------EVFNHREVNYIDKIKKY 234 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT-TCS------------EEEETTSTTHHHHHHHH
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHc-CCC------------EEEeCCCchHHHHHHHH
Confidence 45678999996 3455666666654 57999999999999988764 311 11111 11111211
Q ss_pred -CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 213 -ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 213 -~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
..+.+|+||..+ . .+.+..+.+.|+++|.++.
T Consensus 235 ~~~~~~D~vi~~~-G----------~~~~~~~~~~l~~~G~iv~ 267 (351)
T 1yb5_A 235 VGEKGIDIIIEML-A----------NVNLSKDLSLLSHGGRVIV 267 (351)
T ss_dssp HCTTCEEEEEESC-H----------HHHHHHHHHHEEEEEEEEE
T ss_pred cCCCCcEEEEECC-C----------hHHHHHHHHhccCCCEEEE
Confidence 234799998532 1 1356778899999999864
No 422
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=87.33 E-value=2.9 Score=40.62 Aligned_cols=110 Identities=15% Similarity=0.050 Sum_probs=62.0
Q ss_pred CEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCC--------CCcEEEEEccccccccc
Q 038076 143 PIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTAT--------GGVLQVHIGDVFSPSED 212 (345)
Q Consensus 143 ~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~--------~~rv~v~~gDa~~~l~~ 212 (345)
+|.+||+| |+.++..+.+. +.+|+++|+|++.++..++.- .+-.+. ... ..+++. ..|..+-+
T Consensus 2 kI~VIG~G~vG~~~A~~la~~--G~~V~~~d~~~~~~~~l~~~~-~~i~e~-~l~~~~~~~~~~g~l~~-t~~~~~~~-- 74 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLINQGK-SPIVEP-GLEALLQQGRQTGRLSG-TTDFKKAV-- 74 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTC-CSSCCT-THHHHHHHHHHTTCEEE-ESCHHHHH--
T ss_pred EEEEECCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHhCCC-CCcCCC-CHHHHHHhhcccCceEE-eCCHHHHh--
Confidence 68999998 45566666653 468999999999988766521 110000 000 112322 22222211
Q ss_pred CCCcccEEEEcCCCCCC---CCCCcchHHHHHHHHhccCCC--cEEEEEecCCC
Q 038076 213 ASGRYAGIVVDLFSEGK---VLPQLEEVATWLKLKDRLMPN--GRFMVNCGGID 261 (345)
Q Consensus 213 ~~~~yD~Ii~D~f~~~~---~p~~l~t~ef~~~~~~~L~pg--Gvlvvn~~~~~ 261 (345)
+..|+||+-+..+.. .+.--+..+.++.+...|+++ |.++++..+..
T Consensus 75 --~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~ 126 (436)
T 1mv8_A 75 --LDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVL 126 (436)
T ss_dssp --HTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCC
T ss_pred --ccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcC
Confidence 357999987654321 112123566778888889882 55556665444
No 423
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=87.17 E-value=0.6 Score=43.22 Aligned_cols=92 Identities=16% Similarity=0.084 Sum_probs=57.8
Q ss_pred CCCCCEEEEee--cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE---ccccccccc-
Q 038076 139 VPNGPIAIYGL--GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI---GDVFSPSED- 212 (345)
Q Consensus 139 ~~p~~VLiIG~--G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~---gDa~~~l~~- 212 (345)
.+.++||+.|+ |.|..+..+++.. +.+|.+++.+++-.+.+++. +.. . ++. .|..+-+..
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~-g~~-----------~-~~~~~~~~~~~~~~~~ 204 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALKA-GAW-----------Q-VINYREEDLVERLKEI 204 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHH-TCS-----------E-EEETTTSCHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHc-CCC-----------E-EEECCCccHHHHHHHH
Confidence 45678999994 4555555555543 46999999999999988873 321 1 111 111111111
Q ss_pred -CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 213 -ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 213 -~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
....+|++|..+- .+.++.+.+.|+++|.++.
T Consensus 205 ~~~~~~D~vi~~~g-----------~~~~~~~~~~l~~~G~iv~ 237 (327)
T 1qor_A 205 TGGKKVRVVYDSVG-----------RDTWERSLDCLQRRGLMVS 237 (327)
T ss_dssp TTTCCEEEEEECSC-----------GGGHHHHHHTEEEEEEEEE
T ss_pred hCCCCceEEEECCc-----------hHHHHHHHHHhcCCCEEEE
Confidence 2347999985431 1347788899999998864
No 424
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=87.08 E-value=5.3 Score=39.45 Aligned_cols=102 Identities=15% Similarity=0.023 Sum_probs=64.2
Q ss_pred CCCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 140 PNGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 140 ~p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
..++|.+||+| |+.++..+.+. +.+|++++.+++.++...+..+ +.+++. ..|..+.++ .-++.
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~--G~~V~v~~r~~~~~~~l~~~~~----------~~gi~~-~~s~~e~v~-~l~~a 79 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESR--GYTVSIFNRSREKTEEVIAENP----------GKKLVP-YYTVKEFVE-SLETP 79 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTT--TCCEEEECSSHHHHHHHHHHST----------TSCEEE-CSSHHHHHH-TBCSS
T ss_pred CCCeEEEEccHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHhhCC----------CCCeEE-eCCHHHHHh-CCCCC
Confidence 35789999998 55666666653 5689999999998876655331 112322 223333332 11358
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
|+||+-+.. .-...+.++.+...|+||- +++++.+...
T Consensus 80 DvVil~Vp~------~~~v~~vl~~l~~~l~~g~-iIId~s~g~~ 117 (480)
T 2zyd_A 80 RRILLMVKA------GAGTDAAIDSLKPYLDKGD-IIIDGGNTFF 117 (480)
T ss_dssp CEEEECSCS------SSHHHHHHHHHGGGCCTTC-EEEECSCCCH
T ss_pred CEEEEECCC------HHHHHHHHHHHHhhcCCCC-EEEECCCCCH
Confidence 999985433 2245678888888888765 4557766553
No 425
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=87.05 E-value=2 Score=38.96 Aligned_cols=86 Identities=20% Similarity=0.172 Sum_probs=56.1
Q ss_pred CCEEEEee-c--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 142 GPIAIYGL-G--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 142 ~~VLiIG~-G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+|.+||+ | |+.++..+.+. +.+|+++|.+++-.+.+++ .+.. . .|..+ .-+..|
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~-~g~~-----------~----~~~~~----~~~~aD 69 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS--AHHLAAIEIAPEGRDRLQG-MGIP-----------L----TDGDG----WIDEAD 69 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS--SSEEEEECCSHHHHHHHHH-TTCC-----------C----CCSSG----GGGTCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHh-cCCC-----------c----CCHHH----HhcCCC
Confidence 47999999 8 55666666653 4689999999998877666 2311 1 12222 224689
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEe
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
+||+-+ |+. ...+.++.+...++++.++ +++
T Consensus 70 vVi~av------~~~-~~~~v~~~l~~~l~~~~iv-v~~ 100 (286)
T 3c24_A 70 VVVLAL------PDN-IIEKVAEDIVPRVRPGTIV-LIL 100 (286)
T ss_dssp EEEECS------CHH-HHHHHHHHHGGGSCTTCEE-EES
T ss_pred EEEEcC------Cch-HHHHHHHHHHHhCCCCCEE-EEC
Confidence 999843 222 2567888888888877655 443
No 426
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=86.88 E-value=3.2 Score=39.07 Aligned_cols=116 Identities=11% Similarity=0.086 Sum_probs=69.4
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECC-HHHHHHHHHhcCCC----------CCC----CCCCCCCcEEEEEc
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEID-EILIDKVRDYFGLS----------DLE----KPTATGGVLQVHIG 204 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEid-p~vi~~A~~~f~~~----------~~~----~~~~~~~rv~v~~g 204 (345)
+...|+.||||-.+..-.+....+ .++.+|+| |++++.-++.+.-. ... ......++.+++-.
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~--~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFP--HLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCT--TEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCC--CCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 457899999999999888876555 45666666 99999876664211 000 00001368999999
Q ss_pred cccc--cc----ccC--CCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEE-EEEecCC
Q 038076 205 DVFS--PS----EDA--SGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRF-MVNCGGI 260 (345)
Q Consensus 205 Da~~--~l----~~~--~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvl-vvn~~~~ 260 (345)
|.++ |+ ... .....+++...-.. ++ +.-...++++.+.+++ |+|.+ ++.....
T Consensus 175 DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~-YL-~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~ 236 (334)
T 1rjd_A 175 DLNDITETTRLLDVCTKREIPTIVISECLLC-YM-HNNESQLLINTIMSKF-SHGLWISYDPIGG 236 (334)
T ss_dssp CTTCHHHHHHHHHTTCCTTSCEEEEEESCGG-GS-CHHHHHHHHHHHHHHC-SSEEEEEEEECCC
T ss_pred CCCCcHHHHHHHHhcCCCCCCEEEEEcchhh-CC-CHHHHHHHHHHHHhhC-CCcEEEEEeccCC
Confidence 9987 42 222 24456666543221 22 2223456677777776 67765 4555444
No 427
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=86.59 E-value=1.5 Score=39.73 Aligned_cols=92 Identities=11% Similarity=0.131 Sum_probs=56.9
Q ss_pred CCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
++|.+||+| |..++..+.+. +.+|+++|.+++-.+...+. + ++ ...|..+.+ +..|+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~-g-------------~~-~~~~~~~~~----~~aDv 60 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA--GCSVTIWNRSPEKAEELAAL-G-------------AE-RAATPCEVV----ESCPV 60 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSGGGGHHHHHT-T-------------CE-ECSSHHHHH----HHCSE
T ss_pred CEEEEEeecHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHC-C-------------Ce-ecCCHHHHH----hcCCE
Confidence 479999998 55666666653 57899999999887766553 1 11 112333322 34699
Q ss_pred EEEcCCCCCCCCCCcchHHHH---HHHHhccCCCcEEEEEecCCC
Q 038076 220 IVVDLFSEGKVLPQLEEVATW---LKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~---~~~~~~L~pgGvlvvn~~~~~ 261 (345)
|++-+.+ .....+.+ +.+...|++|.+ ++++.+..
T Consensus 61 vi~~vp~------~~~~~~v~~~~~~l~~~l~~~~~-vi~~st~~ 98 (287)
T 3pef_A 61 TFAMLAD------PAAAEEVCFGKHGVLEGIGEGRG-YVDMSTVD 98 (287)
T ss_dssp EEECCSS------HHHHHHHHHSTTCHHHHCCTTCE-EEECSCCC
T ss_pred EEEEcCC------HHHHHHHHcCcchHhhcCCCCCE-EEeCCCCC
Confidence 9985432 22334555 666777887655 46775444
No 428
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=86.40 E-value=5.9 Score=34.17 Aligned_cols=71 Identities=17% Similarity=0.034 Sum_probs=46.8
Q ss_pred CCEEEEeecccH---HHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc------ccc
Q 038076 142 GPIAIYGLGGGT---AAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP------SED 212 (345)
Q Consensus 142 ~~VLiIG~G~G~---~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~------l~~ 212 (345)
++||+.|+++|. +++.+++ .+.+|.+++.+++-.+...+.++ .++.++..|..+. ++.
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~--~G~~V~~~~r~~~~~~~~~~~~~-----------~~~~~~~~D~~~~~~v~~~~~~ 68 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDA--EGKATYLTGRSESKLSTVTNCLS-----------NNVGYRARDLASHQEVEQLFEQ 68 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHH--TTCCEEEEESCHHHHHHHHHTCS-----------SCCCEEECCTTCHHHHHHHHHS
T ss_pred CEEEEecCCchHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHh-----------hccCeEeecCCCHHHHHHHHHH
Confidence 468888877552 3344443 35789999999988876666442 3567888887763 223
Q ss_pred CCCcccEEEEcCC
Q 038076 213 ASGRYAGIVVDLF 225 (345)
Q Consensus 213 ~~~~yD~Ii~D~f 225 (345)
..+.+|+++..+-
T Consensus 69 ~~~~~d~lv~~Ag 81 (230)
T 3guy_A 69 LDSIPSTVVHSAG 81 (230)
T ss_dssp CSSCCSEEEECCC
T ss_pred HhhcCCEEEEeCC
Confidence 4556799998653
No 429
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=86.36 E-value=1.7 Score=40.36 Aligned_cols=109 Identities=14% Similarity=-0.029 Sum_probs=70.0
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccC---CC
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLK-LEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDA---SG 215 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~-v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~---~~ 215 (345)
.+.++++|=+|.|.+...+.+.--... +.++|+|+..++.-+.++. ...++.+|..++.... ..
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~------------~~~~~~~DI~~i~~~~i~~~~ 82 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ------------GKIMYVGDVRSVTQKHIQEWG 82 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT------------TCEEEECCGGGCCHHHHHHTC
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC------------CCceeCCChHHccHHHhcccC
Confidence 456899999999999888876411122 6899999999998887763 2357889999875321 24
Q ss_pred cccEEEEcCCCCC----C-----CCC--CcchHHHHHHHHhccCCC-------cEEEEEecCCC
Q 038076 216 RYAGIVVDLFSEG----K-----VLP--QLEEVATWLKLKDRLMPN-------GRFMVNCGGID 261 (345)
Q Consensus 216 ~yD~Ii~D~f~~~----~-----~p~--~l~t~ef~~~~~~~L~pg-------Gvlvvn~~~~~ 261 (345)
.+|+|+...+..+ . .-. .-.-.++++ +.+.++|. =+++=|+.+-.
T Consensus 83 ~~Dll~ggpPCQ~fS~ag~~r~g~~d~r~~L~~~~~r-ii~~~~P~~~~~~P~~~l~ENV~gl~ 145 (295)
T 2qrv_A 83 PFDLVIGGSPCNDLSIVNPARKGLYEGTGRLFFEFYR-LLHDARPKEGDDRPFFWLFENVVAMG 145 (295)
T ss_dssp CCSEEEECCCCGGGBTTCTTCCTTTSTTTTHHHHHHH-HHHHHSCCTTCCCCCEEEEEEESSBC
T ss_pred CcCEEEecCCCccccccCccccccccccchhHHHHHH-HHHHhCcccccCCccEEEEEcCcchh
Confidence 6999997653321 1 101 011234444 34457777 45666887654
No 430
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=86.34 E-value=5.8 Score=36.73 Aligned_cols=76 Identities=11% Similarity=0.048 Sum_probs=44.5
Q ss_pred CCCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHH-HHHhcC-CCCCCCCCCCCCcEEEEEcccccccccCCC
Q 038076 140 PNGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDK-VRDYFG-LSDLEKPTATGGVLQVHIGDVFSPSEDASG 215 (345)
Q Consensus 140 ~p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~-A~~~f~-~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~ 215 (345)
++.+|.+||+| |++++..+.......+|..+|+|++..+. +.+... .+. ....+++..+|. + .-+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~------~~~~~~i~~~~~-~----al~ 73 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVF------APKPVDIWHGDY-D----DCR 73 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTS------SSSCCEEEECCG-G----GTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhh------cCCCeEEEcCcH-H----HhC
Confidence 34689999998 55566666554334589999999975553 222111 111 122455654432 2 235
Q ss_pred cccEEEEcCCC
Q 038076 216 RYAGIVVDLFS 226 (345)
Q Consensus 216 ~yD~Ii~D~f~ 226 (345)
..|+||+-+..
T Consensus 74 ~aDvViia~~~ 84 (316)
T 1ldn_A 74 DADLVVICAGA 84 (316)
T ss_dssp TCSEEEECCSC
T ss_pred CCCEEEEcCCC
Confidence 68999986543
No 431
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=86.33 E-value=1.8 Score=45.14 Aligned_cols=105 Identities=13% Similarity=0.073 Sum_probs=64.1
Q ss_pred CCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcC-----CCCCCCC-----CCCCCcEEEEEcccccc
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFG-----LSDLEKP-----TATGGVLQVHIGDVFSP 209 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~-----~~~~~~~-----~~~~~rv~v~~gDa~~~ 209 (345)
++|.+||+| |+.++..+.+ .+.+|+++|++++.++.++++.. +...... .....+++.. .|. +-
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~--aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~-~d~-~~ 388 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALIL--SNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGS-LDY-ES 388 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHT--TTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEE-SSS-GG
T ss_pred cEEEEEcCCHhhHHHHHHHHh--CCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEe-CCH-HH
Confidence 579999998 4566666654 36789999999999887654310 0000000 0011344432 232 21
Q ss_pred cccCCCcccEEEEcCCCCCCCCCCc-chHHHHHHHHhccCCCcEEEEEecCC
Q 038076 210 SEDASGRYAGIVVDLFSEGKVLPQL-EEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 210 l~~~~~~yD~Ii~D~f~~~~~p~~l-~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
-+.-|+||.-++. .+ ...+.++.+...++|+-+++.|..+.
T Consensus 389 ----~~~aDlVIeaVpe------~~~vk~~v~~~l~~~~~~~~IlasntStl 430 (725)
T 2wtb_A 389 ----FRDVDMVIEAVIE------NISLKQQIFADLEKYCPQHCILASNTSTI 430 (725)
T ss_dssp ----GTTCSEEEECCCS------CHHHHHHHHHHHHHHSCTTCEEEECCSSS
T ss_pred ----HCCCCEEEEcCcC------CHHHHHHHHHHHHhhCCCCcEEEeCCCCC
Confidence 2567999985533 22 24578888999999999888786543
No 432
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=86.31 E-value=1.8 Score=38.96 Aligned_cols=89 Identities=16% Similarity=-0.025 Sum_probs=53.7
Q ss_pred CCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
.+|.+||+| |..++..+.+ +.+|+++|.+++-.+...+. +.. .. + +...-+..|+
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~---g~~V~~~~~~~~~~~~~~~~-g~~-------------~~--~----~~~~~~~~D~ 58 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR---RFPTLVWNRTFEKALRHQEE-FGS-------------EA--V----PLERVAEARV 58 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT---TSCEEEECSSTHHHHHHHHH-HCC-------------EE--C----CGGGGGGCSE
T ss_pred CeEEEEcccHHHHHHHHHHhC---CCeEEEEeCCHHHHHHHHHC-CCc-------------cc--C----HHHHHhCCCE
Confidence 379999998 3445555554 56799999999887765553 211 11 1 1111246899
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCC
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
|++-+.. .....+.++.+...|++|.+ ++++...
T Consensus 59 vi~~v~~------~~~~~~v~~~l~~~l~~~~~-vv~~s~~ 92 (289)
T 2cvz_A 59 IFTCLPT------TREVYEVAEALYPYLREGTY-WVDATSG 92 (289)
T ss_dssp EEECCSS------HHHHHHHHHHHTTTCCTTEE-EEECSCC
T ss_pred EEEeCCC------hHHHHHHHHHHHhhCCCCCE-EEECCCC
Confidence 9984432 22234566777777877654 4566543
No 433
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=86.14 E-value=3.9 Score=37.40 Aligned_cols=93 Identities=9% Similarity=0.147 Sum_probs=53.4
Q ss_pred CCCCCEEEEeec-ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE-cccccccccCCCc
Q 038076 139 VPNGPIAIYGLG-GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI-GDVFSPSEDASGR 216 (345)
Q Consensus 139 ~~p~~VLiIG~G-~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~-gDa~~~l~~~~~~ 216 (345)
..+++|++||+| .|......++.+ +.+|+++|.+++-.+.+.+ ++ .+.+. .+ +.+.-+.
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~d~~~~~~~~~~~-~g-------------~~~~~~~~----l~~~l~~ 215 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAAL-GANVKVGARSSAHLARITE-MG-------------LVPFHTDE----LKEHVKD 215 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH-TT-------------CEEEEGGG----HHHHSTT
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHH-CC-------------CeEEchhh----HHHHhhC
Confidence 357899999987 232222223334 4699999999976554444 22 12221 22 2222357
Q ss_pred ccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 217 YAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
.|+|++-+ |.++.+.+. .+.++|++++ +|+....
T Consensus 216 aDvVi~~~------p~~~i~~~~----~~~mk~g~~l-in~a~g~ 249 (300)
T 2rir_A 216 IDICINTI------PSMILNQTV----LSSMTPKTLI-LDLASRP 249 (300)
T ss_dssp CSEEEECC------SSCCBCHHH----HTTSCTTCEE-EECSSTT
T ss_pred CCEEEECC------ChhhhCHHH----HHhCCCCCEE-EEEeCCC
Confidence 99999743 334555443 3567877654 6887543
No 434
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=85.96 E-value=0.83 Score=42.94 Aligned_cols=92 Identities=15% Similarity=0.044 Sum_probs=57.3
Q ss_pred CCCCCEEEEee--cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEc---cccccccc-
Q 038076 139 VPNGPIAIYGL--GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIG---DVFSPSED- 212 (345)
Q Consensus 139 ~~p~~VLiIG~--G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~g---Da~~~l~~- 212 (345)
.+.++||+.|+ |.|..+..+++.. +.+|.+++.+++-.+.+++. +.. .++.- |..+-+..
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~-g~~------------~~~~~~~~~~~~~~~~~ 226 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEKL-GAA------------AGFNYKKEDFSEATLKF 226 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH-TCS------------EEEETTTSCHHHHHHHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHc-CCc------------EEEecCChHHHHHHHHH
Confidence 45678999984 4555666666554 57999999999999988654 321 11111 11111211
Q ss_pred -CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 213 -ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 213 -~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
....+|++|..+-. +.++.+.+.|+++|.++.
T Consensus 227 ~~~~~~d~vi~~~G~-----------~~~~~~~~~l~~~G~iv~ 259 (354)
T 2j8z_A 227 TKGAGVNLILDCIGG-----------SYWEKNVNCLALDGRWVL 259 (354)
T ss_dssp TTTSCEEEEEESSCG-----------GGHHHHHHHEEEEEEEEE
T ss_pred hcCCCceEEEECCCc-----------hHHHHHHHhccCCCEEEE
Confidence 23479999853311 135667788999999864
No 435
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=85.70 E-value=3.8 Score=37.85 Aligned_cols=95 Identities=13% Similarity=0.120 Sum_probs=57.3
Q ss_pred CCCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 140 PNGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 140 ~p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
...+|.+||+| |..++..+.+. +.+|+++|.+++-.+...+. + ++ ...|..+.+ +..
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~l~~~-g-------------~~-~~~~~~e~~----~~a 88 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA--GYALQVWNRTPARAASLAAL-G-------------AT-IHEQARAAA----RDA 88 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTT-T-------------CE-EESSHHHHH----TTC
T ss_pred CCCEEEEECccHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHC-C-------------CE-eeCCHHHHH----hcC
Confidence 34689999998 44566666653 57899999999987765442 1 21 123333332 457
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHH--HHHhccCCCcEEEEEecCCCC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWL--KLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~--~~~~~L~pgGvlvvn~~~~~~ 262 (345)
|+|++-+.++ ....+.+. .+...++++.+ ++++.+...
T Consensus 89 DvVi~~vp~~------~~~~~v~~~~~~~~~l~~~~~-vi~~st~~~ 128 (320)
T 4dll_A 89 DIVVSMLENG------AVVQDVLFAQGVAAAMKPGSL-FLDMASITP 128 (320)
T ss_dssp SEEEECCSSH------HHHHHHHTTTCHHHHCCTTCE-EEECSCCCH
T ss_pred CEEEEECCCH------HHHHHHHcchhHHhhCCCCCE-EEecCCCCH
Confidence 9999854321 12334444 55566776654 567765543
No 436
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=85.64 E-value=2.4 Score=41.89 Aligned_cols=103 Identities=13% Similarity=0.102 Sum_probs=62.1
Q ss_pred CCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
.+|.+||+| |+.++..+.+. +.+|++++.+++.++...+..+..+ ...++. ...|..+.++. -+..|+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~--G~~V~v~dr~~~~~~~l~~~~g~~~------~~~~i~-~~~~~~e~v~~-l~~aDv 71 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK--GFKVAVFNRTYSKSEEFMKANASAP------FAGNLK-AFETMEAFAAS-LKKPRK 71 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHTTTST------TGGGEE-ECSCHHHHHHH-BCSSCE
T ss_pred CEEEEEChHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcCCCC------CCCCeE-EECCHHHHHhc-ccCCCE
Confidence 479999988 55666666653 4679999999998887766544221 012232 12233333221 125899
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
|++-+.. .....+.++.+...|++|-+ ++++.+..
T Consensus 72 VilaVp~------~~~v~~vl~~l~~~l~~g~i-IId~sng~ 106 (478)
T 1pgj_A 72 ALILVQA------GAATDSTIEQLKKVFEKGDI-LVDTGNAH 106 (478)
T ss_dssp EEECCCC------SHHHHHHHHHHHHHCCTTCE-EEECCCCC
T ss_pred EEEecCC------hHHHHHHHHHHHhhCCCCCE-EEECCCCC
Confidence 9985433 22346677888888887654 45665443
No 437
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=85.55 E-value=2.6 Score=36.80 Aligned_cols=96 Identities=15% Similarity=0.090 Sum_probs=60.3
Q ss_pred CCCEEEEeecccHHHHHHHHhCC--CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccc--cccc-CCC
Q 038076 141 NGPIAIYGLGGGTAAHLMLDLWP--SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFS--PSED-ASG 215 (345)
Q Consensus 141 p~~VLiIG~G~G~~~~~l~~~~p--~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~--~l~~-~~~ 215 (345)
.++++++|+| .++..+.+..- +. |+++|.||+.++.++ . .+.++.+|+.+ .++. .-+
T Consensus 9 ~~~viI~G~G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--~-------------~~~~i~gd~~~~~~l~~a~i~ 70 (234)
T 2aef_A 9 SRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKKVLR--S-------------GANFVHGDPTRVSDLEKANVR 70 (234)
T ss_dssp -CEEEEESCC--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--T-------------TCEEEESCTTCHHHHHHTTCT
T ss_pred CCEEEEECCC--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--c-------------CCeEEEcCCCCHHHHHhcCcc
Confidence 4689999874 55555554432 35 999999999877655 2 25789999875 2332 246
Q ss_pred cccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 216 RYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
..|.|++-..+. ..........+.+.|+..+++.+....
T Consensus 71 ~ad~vi~~~~~d-------~~n~~~~~~a~~~~~~~~iia~~~~~~ 109 (234)
T 2aef_A 71 GARAVIVDLESD-------SETIHCILGIRKIDESVRIIAEAERYE 109 (234)
T ss_dssp TCSEEEECCSCH-------HHHHHHHHHHHHHCSSSEEEEECSSGG
T ss_pred hhcEEEEcCCCc-------HHHHHHHHHHHHHCCCCeEEEEECCHh
Confidence 789998743221 112234445566888877776665443
No 438
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=85.19 E-value=0.12 Score=61.16 Aligned_cols=102 Identities=10% Similarity=0.052 Sum_probs=47.6
Q ss_pred CCCEEEEeecccHHHHHHHHhCC-----CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCC
Q 038076 141 NGPIAIYGLGGGTAAHLMLDLWP-----SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASG 215 (345)
Q Consensus 141 p~~VLiIG~G~G~~~~~l~~~~p-----~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~ 215 (345)
..+||+||.|+|..+..+++... ..+.+..|+++...+.|++.|..- .+..-.=|..+.-.....
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~----------di~~~~~d~~~~~~~~~~ 1310 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL----------HVTQGQWDPANPAPGSLG 1310 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH----------TEEEECCCSSCCCC----
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc----------ccccccccccccccCCCC
Confidence 46899999999987776665433 247888999998887777766310 011000011000000245
Q ss_pred cccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEE
Q 038076 216 RYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVN 256 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn 256 (345)
.||+||..---+.. . ...+.++++++.|+|||.+++.
T Consensus 1311 ~ydlvia~~vl~~t--~--~~~~~l~~~~~lL~p~G~l~~~ 1347 (2512)
T 2vz8_A 1311 KADLLVCNCALATL--G--DPAVAVGNMAATLKEGGFLLLH 1347 (2512)
T ss_dssp -CCEEEEECC------------------------CCEEEEE
T ss_pred ceeEEEEccccccc--c--cHHHHHHHHHHhcCCCcEEEEE
Confidence 69999964211110 1 1245788999999999998774
No 439
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=85.18 E-value=8.8 Score=35.37 Aligned_cols=93 Identities=11% Similarity=0.040 Sum_probs=57.3
Q ss_pred CCCEEEEeec--ccHHHHHHHHhC--CCCEEEEEECCHH--HHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCC
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLW--PSLKLEGWEIDEI--LIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDAS 214 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~--p~~~v~~VEidp~--vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~ 214 (345)
..+|.+||+| |+.++..|.+.. +..+|++++.+++ -.+..+++ + +++ ..|..+. -
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~-G-------------~~~-~~~~~e~----~ 82 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKM-G-------------VKL-TPHNKET----V 82 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHH-T-------------CEE-ESCHHHH----H
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHc-C-------------CEE-eCChHHH----h
Confidence 3589999998 667777776531 1257999999985 55544432 2 222 2232222 2
Q ss_pred CcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCC
Q 038076 215 GRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 215 ~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
+..|+||+-+. + -...+.++.+...++++.++ +++.+.
T Consensus 83 ~~aDvVilav~------~-~~~~~vl~~l~~~l~~~~iv-vs~s~g 120 (322)
T 2izz_A 83 QHSDVLFLAVK------P-HIIPFILDEIGADIEDRHIV-VSCAAG 120 (322)
T ss_dssp HHCSEEEECSC------G-GGHHHHHHHHGGGCCTTCEE-EECCTT
T ss_pred ccCCEEEEEeC------H-HHHHHHHHHHHhhcCCCCEE-EEeCCC
Confidence 46899998542 1 24567888888888877654 455433
No 440
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=85.16 E-value=3.1 Score=40.91 Aligned_cols=99 Identities=11% Similarity=0.015 Sum_probs=61.9
Q ss_pred CCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
.+|.+||+| |..++..+.+. +.+|.+++.+++.++...+..+ +.++. ...|..+.++. -++.|+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~----------~~gi~-~~~s~~e~v~~-l~~aDv 71 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR--GYTVAIYNRTTSKTEEVFKEHQ----------DKNLV-FTKTLEEFVGS-LEKPRR 71 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHTT----------TSCEE-ECSSHHHHHHT-BCSSCE
T ss_pred CcEEEEeeHHHHHHHHHHHHhC--CCEEEEEcCCHHHHHHHHHhCc----------CCCeE-EeCCHHHHHhh-ccCCCE
Confidence 579999998 55666666653 4689999999998877665432 11232 22343333321 235899
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
|++-+.. .....+.++.+...|++|-+ ++++.+..
T Consensus 72 Vilavp~------~~~v~~vl~~l~~~l~~g~i-iId~s~~~ 106 (474)
T 2iz1_A 72 IMLMVQA------GAATDATIKSLLPLLDIGDI-LIDGGNTH 106 (474)
T ss_dssp EEECCCT------THHHHHHHHHHGGGCCTTCE-EEECSCCC
T ss_pred EEEEccC------chHHHHHHHHHHhhCCCCCE-EEECCCCC
Confidence 9985433 22345677888888887765 45665443
No 441
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=85.14 E-value=1.3 Score=41.90 Aligned_cols=92 Identities=12% Similarity=0.040 Sum_probs=58.7
Q ss_pred CCCCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE---ccccccccc-
Q 038076 139 VPNGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI---GDVFSPSED- 212 (345)
Q Consensus 139 ~~p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~---gDa~~~l~~- 212 (345)
.+..+||++|++ .|..+.++++.. +.+|.++- +++-.+.++++ +.. .++. .|..+.+..
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~-~~~~~~~~~~l-Ga~------------~vi~~~~~~~~~~v~~~ 227 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS-GYIPIATC-SPHNFDLAKSR-GAE------------EVFDYRAPNLAQTIRTY 227 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHT-TCS------------EEEETTSTTHHHHHHHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe-CHHHHHHHHHc-CCc------------EEEECCCchHHHHHHHH
Confidence 445789999983 577787888765 46787774 88888888774 321 1222 222222222
Q ss_pred CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhcc-CCCcEEEE
Q 038076 213 ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRL-MPNGRFMV 255 (345)
Q Consensus 213 ~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L-~pgGvlvv 255 (345)
.++++|+|+- ... ..+.++.+.+.| +++|.++.
T Consensus 228 t~g~~d~v~d-~~g---------~~~~~~~~~~~l~~~~G~iv~ 261 (371)
T 3gqv_A 228 TKNNLRYALD-CIT---------NVESTTFCFAAIGRAGGHYVS 261 (371)
T ss_dssp TTTCCCEEEE-SSC---------SHHHHHHHHHHSCTTCEEEEE
T ss_pred ccCCccEEEE-CCC---------chHHHHHHHHHhhcCCCEEEE
Confidence 3456999884 222 135678888889 69999864
No 442
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=84.74 E-value=1.3 Score=42.81 Aligned_cols=48 Identities=10% Similarity=0.011 Sum_probs=40.0
Q ss_pred CCCCCEEEEeecccHHHHHHH-HhCCC-CEEEEEECCHHHHHHHHHhcCC
Q 038076 139 VPNGPIAIYGLGGGTAAHLML-DLWPS-LKLEGWEIDEILIDKVRDYFGL 186 (345)
Q Consensus 139 ~~p~~VLiIG~G~G~~~~~l~-~~~p~-~~v~~VEidp~vi~~A~~~f~~ 186 (345)
.+...++++|++.|..+..+. +..+. .+|.++|.+|...+..++....
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 355789999999999998877 55554 8999999999999998887643
No 443
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=84.68 E-value=2 Score=39.00 Aligned_cols=93 Identities=11% Similarity=0.149 Sum_probs=56.4
Q ss_pred CCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
++|.+||+| |..++..+.+. +.+|+++|.+++-.+...+. + ++ ...|..+.+ +..|+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~-g-------------~~-~~~~~~~~~----~~adv 60 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA--GFDVTVWNRNPAKCAPLVAL-G-------------AR-QASSPAEVC----AACDI 60 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH--TCCEEEECSSGGGGHHHHHH-T-------------CE-ECSCHHHHH----HHCSE
T ss_pred CeEEEEccCHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHC-C-------------Ce-ecCCHHHHH----HcCCE
Confidence 479999998 55667777664 46899999999887766553 1 11 112333322 34699
Q ss_pred EEEcCCCCCCCCCCcchHHHH---HHHHhccCCCcEEEEEecCCCC
Q 038076 220 IVVDLFSEGKVLPQLEEVATW---LKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~---~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
|++-+.+ .....+.+ +.+...++++.+ ++++.+...
T Consensus 61 vi~~v~~------~~~~~~v~~~~~~l~~~l~~g~~-vv~~st~~~ 99 (287)
T 3pdu_A 61 TIAMLAD------PAAAREVCFGANGVLEGIGGGRG-YIDMSTVDD 99 (287)
T ss_dssp EEECCSS------HHHHHHHHHSTTCGGGTCCTTCE-EEECSCCCH
T ss_pred EEEEcCC------HHHHHHHHcCchhhhhcccCCCE-EEECCCCCH
Confidence 9985432 22234444 555666776655 457765443
No 444
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=84.63 E-value=6.4 Score=36.44 Aligned_cols=99 Identities=17% Similarity=0.094 Sum_probs=53.3
Q ss_pred CEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhc--CCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 143 PIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYF--GLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 143 ~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f--~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
+|.+||+| |..++..+.......+|..+|++++.++.....+ ..+. ....++...|. +- -+..|
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~-------~~~~~i~~~d~-~~----~~~aD 69 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPF-------TRRANIYAGDY-AD----LKGSD 69 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGG-------SCCCEEEECCG-GG----GTTCS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhh-------cCCcEEEeCCH-HH----hCCCC
Confidence 68999987 3445555554321238999999998776533211 1110 01233433442 21 25689
Q ss_pred EEEEcCCCCCCCCCC--c--c------hHHHHHHHHhccCCCcEEEE
Q 038076 219 GIVVDLFSEGKVLPQ--L--E------EVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~--l--~------t~ef~~~~~~~L~pgGvlvv 255 (345)
+||+-+..+.. |.. + . -.+..+.+.+. .|++++++
T Consensus 70 vViiav~~~~~-~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~ii~ 114 (319)
T 1a5z_A 70 VVIVAAGVPQK-PGETRLQLLGRNARVMKEIARNVSKY-APDSIVIV 114 (319)
T ss_dssp EEEECCCCCCC-SSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEE
T ss_pred EEEEccCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEE
Confidence 99987655432 111 0 0 13455555555 58887654
No 445
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=84.63 E-value=8.9 Score=35.88 Aligned_cols=74 Identities=11% Similarity=0.039 Sum_probs=42.9
Q ss_pred CCCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHH-H---HHhcCCCCCCCCCCCCCcEEEEEcccccccccC
Q 038076 140 PNGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDK-V---RDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDA 213 (345)
Q Consensus 140 ~p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~-A---~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~ 213 (345)
++.+|.+||+| |.+++..+....-..++..+|++++.++- + ..-+.+. ..++++..+|...
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~--------~~~v~i~~~~~~a----- 70 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFA--------PQPVKTSYGTYED----- 70 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGS--------SSCCEEEEECGGG-----
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccc--------cCCeEEEeCcHHH-----
Confidence 35789999987 33444444443212489999999986653 1 1112211 1345666555322
Q ss_pred CCcccEEEEcCCC
Q 038076 214 SGRYAGIVVDLFS 226 (345)
Q Consensus 214 ~~~yD~Ii~D~f~ 226 (345)
-+..|+||+-+-.
T Consensus 71 ~~~aDvVvi~ag~ 83 (326)
T 3pqe_A 71 CKDADIVCICAGA 83 (326)
T ss_dssp GTTCSEEEECCSC
T ss_pred hCCCCEEEEeccc
Confidence 2568999986533
No 446
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=84.29 E-value=1.3 Score=42.59 Aligned_cols=102 Identities=10% Similarity=0.030 Sum_probs=55.1
Q ss_pred CEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCC-----CCCCCcEEEEEcccccccccCCC
Q 038076 143 PIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKP-----TATGGVLQVHIGDVFSPSEDASG 215 (345)
Q Consensus 143 ~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~-----~~~~~rv~v~~gDa~~~l~~~~~ 215 (345)
+|.+||+| |+.++..+.+ +.+|+++|++++.++..++.. .+-.+.. .....+++. ..|..+. -+
T Consensus 2 kI~VIG~G~vG~~~A~~La~---G~~V~~~d~~~~~~~~l~~~~-~~i~e~~l~~~~~~~~~~l~~-t~~~~~~----~~ 72 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL---QNEVTIVDILPSKVDKINNGL-SPIQDEYIEYYLKSKQLSIKA-TLDSKAA----YK 72 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT---TSEEEEECSCHHHHHHHHTTC-CSSCCHHHHHHHHHSCCCEEE-ESCHHHH----HH
T ss_pred EEEEECCCHHHHHHHHHHhC---CCEEEEEECCHHHHHHHHcCC-CCcCCCCHHHHHHhccCcEEE-eCCHHHH----hc
Confidence 68899998 4455555543 578999999999888665432 1100000 000012221 1222111 13
Q ss_pred cccEEEEcCCCCC----CCCCCcchHHHHHHHHhccCCCcEEE
Q 038076 216 RYAGIVVDLFSEG----KVLPQLEEVATWLKLKDRLMPNGRFM 254 (345)
Q Consensus 216 ~yD~Ii~D~f~~~----~~p~~l~t~ef~~~~~~~L~pgGvlv 254 (345)
..|+||+-+..+. ..+.--...+.++.+.. ++++.+++
T Consensus 73 ~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV 114 (402)
T 1dlj_A 73 EAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLI 114 (402)
T ss_dssp HCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEE
T ss_pred CCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEE
Confidence 5799998665431 00111135677888888 88876655
No 447
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=84.12 E-value=2.2 Score=39.31 Aligned_cols=94 Identities=12% Similarity=0.122 Sum_probs=56.8
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
..+|.+||+| |..++..+.+. +.+|+++|.+++-++...+. + ++ ...|..+.+ +..|
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~l~~~-g-------------~~-~~~~~~~~~----~~aD 79 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKN--GFKVTVWNRTLSKCDELVEH-G-------------AS-VCESPAEVI----KKCK 79 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSGGGGHHHHHT-T-------------CE-ECSSHHHHH----HHCS
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHC-C-------------Ce-EcCCHHHHH----HhCC
Confidence 4689999998 55666666653 56899999999887766542 1 11 112332322 3479
Q ss_pred EEEEcCCCCCCCCCCcchHHHH---HHHHhccCCCcEEEEEecCCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATW---LKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~---~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
+||+-+.++ ....+.+ +.+...+++|. +++++.+...
T Consensus 80 vvi~~vp~~------~~~~~v~~~~~~l~~~l~~g~-~vv~~st~~~ 119 (310)
T 3doj_A 80 YTIAMLSDP------CAALSVVFDKGGVLEQICEGK-GYIDMSTVDA 119 (310)
T ss_dssp EEEECCSSH------HHHHHHHHSTTCGGGGCCTTC-EEEECSCCCH
T ss_pred EEEEEcCCH------HHHHHHHhCchhhhhccCCCC-EEEECCCCCH
Confidence 999854331 1233444 45556677655 4567765443
No 448
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=83.95 E-value=6.1 Score=36.52 Aligned_cols=89 Identities=11% Similarity=0.096 Sum_probs=54.7
Q ss_pred CCEEEEeec--ccHHHHHHHHhCCC-CEEEEEECCH-------HHHHHHHHhcCCCCCCCCCCCCCcEEEEEc-cccccc
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLWPS-LKLEGWEIDE-------ILIDKVRDYFGLSDLEKPTATGGVLQVHIG-DVFSPS 210 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~p~-~~v~~VEidp-------~vi~~A~~~f~~~~~~~~~~~~~rv~v~~g-Da~~~l 210 (345)
.+|.+||+| |..++..+.+. + .+|+++|.++ +..+.+.+. .+ .. |..+.+
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~--G~~~V~~~dr~~~~~~~~~~~~~~~~~~--------------g~---~~~s~~e~~ 85 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR--NAARLAAYDLRFNDPAASGALRARAAEL--------------GV---EPLDDVAGI 85 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCSEEEEECGGGGCTTTHHHHHHHHHHT--------------TC---EEESSGGGG
T ss_pred CeEEEECccHHHHHHHHHHHHc--CCCeEEEEeCCCccccchHHHHHHHHHC--------------CC---CCCCHHHHH
Confidence 579999998 55666666653 5 6899999998 444433321 11 22 333332
Q ss_pred ccCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 211 EDASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 211 ~~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
+.-|+||+-+.. . ...+.++.+...|+++.+ ++++.+..
T Consensus 86 ----~~aDvVi~avp~------~-~~~~~~~~i~~~l~~~~i-vv~~st~~ 124 (317)
T 4ezb_A 86 ----ACADVVLSLVVG------A-ATKAVAASAAPHLSDEAV-FIDLNSVG 124 (317)
T ss_dssp ----GGCSEEEECCCG------G-GHHHHHHHHGGGCCTTCE-EEECCSCC
T ss_pred ----hcCCEEEEecCC------H-HHHHHHHHHHhhcCCCCE-EEECCCCC
Confidence 457999985433 2 224456788888887665 45666544
No 449
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=83.80 E-value=1.9 Score=40.31 Aligned_cols=91 Identities=12% Similarity=0.113 Sum_probs=52.8
Q ss_pred CCCCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE--ccccccccc-C
Q 038076 139 VPNGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI--GDVFSPSED-A 213 (345)
Q Consensus 139 ~~p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~--gDa~~~l~~-~ 213 (345)
.+..+||+.|++ .|..+.++++.....+|.+++ +++-.+.++ ++.. .++. .|..+-+.+ .
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga~------------~~~~~~~~~~~~~~~~~ 205 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSVT------------HLFDRNADYVQEVKRIS 205 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGSS------------EEEETTSCHHHHHHHHC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCCc------------EEEcCCccHHHHHHHhc
Confidence 456889999973 466777777766567898888 555555555 4422 1222 121122211 3
Q ss_pred CCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 214 SGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 214 ~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
++.+|+||--. .. +.++.+.+.|+++|.+++
T Consensus 206 ~~g~Dvv~d~~-g~----------~~~~~~~~~l~~~G~~v~ 236 (349)
T 4a27_A 206 AEGVDIVLDCL-CG----------DNTGKGLSLLKPLGTYIL 236 (349)
T ss_dssp TTCEEEEEEEC-C-----------------CTTEEEEEEEEE
T ss_pred CCCceEEEECC-Cc----------hhHHHHHHHhhcCCEEEE
Confidence 56899988432 21 123567789999999875
No 450
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=83.40 E-value=1.4 Score=40.65 Aligned_cols=92 Identities=15% Similarity=0.129 Sum_probs=53.1
Q ss_pred CCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEE----EcccccccccCCC
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVH----IGDVFSPSEDASG 215 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~----~gDa~~~l~~~~~ 215 (345)
.+|++||+| |+.++..|.+. +.+|+.++-++ . +..++. ++.-. ..++..++. ..|. + .-+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~-~-~~i~~~-g~~~~----~~~g~~~~~~~~~~~~~----~-~~~ 68 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS--GEDVHFLLRRD-Y-EAIAGN-GLKVF----SINGDFTLPHVKGYRAP----E-EIG 68 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT--SCCEEEECSTT-H-HHHHHT-CEEEE----ETTCCEEESCCCEESCH----H-HHC
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCeEEEEEcCc-H-HHHHhC-CCEEE----cCCCeEEEeeceeecCH----H-HcC
Confidence 589999998 55666666653 46899999987 3 444432 21100 001222210 1111 1 124
Q ss_pred cccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEE
Q 038076 216 RYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFM 254 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlv 254 (345)
.+|+|++-+.. ....+.++.++..++++.+++
T Consensus 69 ~~D~vilavk~-------~~~~~~l~~l~~~l~~~~~iv 100 (312)
T 3hn2_A 69 PMDLVLVGLKT-------FANSRYEELIRPLVEEGTQIL 100 (312)
T ss_dssp CCSEEEECCCG-------GGGGGHHHHHGGGCCTTCEEE
T ss_pred CCCEEEEecCC-------CCcHHHHHHHHhhcCCCCEEE
Confidence 79999984322 234578999999999987664
No 451
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=83.33 E-value=1.7 Score=40.84 Aligned_cols=109 Identities=14% Similarity=0.120 Sum_probs=64.5
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCC--C------CCCCCCCC---CCcEEEEEcccc
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGL--S------DLEKPTAT---GGVLQVHIGDVF 207 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~--~------~~~~~~~~---~~rv~v~~gDa~ 207 (345)
..+|.+||+| |..++..++. .+.+|+.+|++|+.++.+.++..- . ........ -.+++.. .|..
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~--~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~-~~l~ 82 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFAS--GGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLA 82 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH--TTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHH
T ss_pred CCeEEEECCcHHHHHHHHHHHh--CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccc-cchH
Confidence 4689999998 3334444443 478999999999988876543310 0 00000000 0122221 1211
Q ss_pred cccccCCCcccEEEEcCCCCCCCCCCc-chHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 208 SPSEDASGRYAGIVVDLFSEGKVLPQL-EEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 208 ~~l~~~~~~yD~Ii~D~f~~~~~p~~l-~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
+ .-+..|+|+= .+|+.+ ...+.|+++-+.++|+-+++.|..+...
T Consensus 83 ~----a~~~ad~ViE------av~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~i 128 (319)
T 3ado_A 83 E----AVEGVVHIQE------CVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLP 128 (319)
T ss_dssp H----HTTTEEEEEE------CCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCH
T ss_pred h----HhccCcEEee------ccccHHHHHHHHHHHHHHHhhhcceeehhhhhccc
Confidence 1 1245777773 344443 4678999999999999999999887653
No 452
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=83.21 E-value=1.4 Score=40.60 Aligned_cols=90 Identities=22% Similarity=0.195 Sum_probs=54.9
Q ss_pred CEEEEee--cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccccc-CCCcccE
Q 038076 143 PIAIYGL--GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSED-ASGRYAG 219 (345)
Q Consensus 143 ~VLiIG~--G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~-~~~~yD~ 219 (345)
+||++|+ |.|..+.++++.. +.+|.+++.+++-.+.+++ ++... -+.....| .+.++. ....+|+
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~-lGa~~---------~i~~~~~~-~~~~~~~~~~~~d~ 219 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRV-LGAKE---------VLAREDVM-AERIRPLDKQRWAA 219 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHH-TTCSE---------EEECC----------CCSCCEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHH-cCCcE---------EEecCCcH-HHHHHHhcCCcccE
Confidence 8999996 4567777777765 4689999999988888877 44221 01100111 111111 2357999
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
||--. .. +.++.+.+.|+++|.++.
T Consensus 220 vid~~-g~----------~~~~~~~~~l~~~G~~v~ 244 (328)
T 1xa0_A 220 AVDPV-GG----------RTLATVLSRMRYGGAVAV 244 (328)
T ss_dssp EEECS-TT----------TTHHHHHHTEEEEEEEEE
T ss_pred EEECC-cH----------HHHHHHHHhhccCCEEEE
Confidence 87422 21 136677889999999874
No 453
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=83.17 E-value=3.8 Score=37.02 Aligned_cols=92 Identities=14% Similarity=0.114 Sum_probs=55.3
Q ss_pred CCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
.+|.+||+| |..++..+.+. +.+|.++|.+++-.+..++. + ++. ..|..+.+ +..|+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~-g-------------~~~-~~~~~~~~----~~~D~ 64 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA--GYSLVVSDRNPEAIADVIAA-G-------------AET-ASTAKAIA----EQCDV 64 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT-T-------------CEE-CSSHHHHH----HHCSE
T ss_pred ceEEEECchHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHC-C-------------Cee-cCCHHHHH----hCCCE
Confidence 379999998 44556666553 46899999999987766553 2 111 12222222 35899
Q ss_pred EEEcCCCCCCCCCCcchHHHH---HHHHhccCCCcEEEEEecCCC
Q 038076 220 IVVDLFSEGKVLPQLEEVATW---LKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~---~~~~~~L~pgGvlvvn~~~~~ 261 (345)
|++-+.. .....+.+ +.+...+++|.++ +++.+..
T Consensus 65 vi~~v~~------~~~~~~~~~~~~~l~~~l~~~~~v-v~~s~~~ 102 (299)
T 1vpd_A 65 IITMLPN------SPHVKEVALGENGIIEGAKPGTVL-IDMSSIA 102 (299)
T ss_dssp EEECCSS------HHHHHHHHHSTTCHHHHCCTTCEE-EECSCCC
T ss_pred EEEECCC------HHHHHHHHhCcchHhhcCCCCCEE-EECCCCC
Confidence 9985432 12233444 4566778887755 6775443
No 454
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=83.00 E-value=6.7 Score=38.92 Aligned_cols=100 Identities=10% Similarity=0.048 Sum_probs=62.6
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-hcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRD-YFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~-~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
..+|.+||+| |..++..+.+. +.+|++++.+++.++...+ ... +.+++. ..|..+.++ .-++.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~--G~~V~v~dr~~~~~~~l~~~~~~----------~~gi~~-~~s~~e~v~-~l~~a 75 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADH--GFTVCAYNRTQSKVDHFLANEAK----------GKSIIG-ATSIEDFIS-KLKRP 75 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSHHHHHHHHTTTT----------TSSEEC-CSSHHHHHH-TSCSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHccccc----------CCCeEE-eCCHHHHHh-cCCCC
Confidence 3589999999 56677777663 5689999999998887665 211 012221 123333322 12357
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
|+||+-+.. .....+.++.+...|+||- +++++.+..
T Consensus 76 DvVil~Vp~------~~~v~~vl~~l~~~l~~g~-iIId~s~~~ 112 (497)
T 2p4q_A 76 RKVMLLVKA------GAPVDALINQIVPLLEKGD-IIIDGGNSH 112 (497)
T ss_dssp CEEEECCCS------SHHHHHHHHHHGGGCCTTC-EEEECSCCC
T ss_pred CEEEEEcCC------hHHHHHHHHHHHHhCCCCC-EEEECCCCC
Confidence 999985433 2245677888888887765 455666554
No 455
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=82.71 E-value=14 Score=34.19 Aligned_cols=106 Identities=13% Similarity=0.098 Sum_probs=53.8
Q ss_pred CCCEEEEeeccc--HHHHHHHHhCCCCEEEEEECCHHHHHH-HHHhc-CCCCCCCCCCCCCcEEEEEcccccccccCCCc
Q 038076 141 NGPIAIYGLGGG--TAAHLMLDLWPSLKLEGWEIDEILIDK-VRDYF-GLSDLEKPTATGGVLQVHIGDVFSPSEDASGR 216 (345)
Q Consensus 141 p~~VLiIG~G~G--~~~~~l~~~~p~~~v~~VEidp~vi~~-A~~~f-~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~ 216 (345)
+.+|.+||+|.- +++..+.......++..+|++++.++- +.+.- ..+. ....+++..+|... -+.
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~------~~~~~~v~~~~~~a-----~~~ 74 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPY------SPTTVRVKAGEYSD-----CHD 74 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGG------SSSCCEEEECCGGG-----GTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhh------cCCCeEEEeCCHHH-----hCC
Confidence 468999998722 333333333223589999999865542 22110 0111 11344555444222 256
Q ss_pred ccEEEEcCCCCCCCCCC------cchHHHHHHHHhc---cCCCcEEEEEecC
Q 038076 217 YAGIVVDLFSEGKVLPQ------LEEVATWLKLKDR---LMPNGRFMVNCGG 259 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~------l~t~ef~~~~~~~---L~pgGvlvvn~~~ 259 (345)
-|+|++-+..+.. |.. ..+...+..+.+. .+|++++++ +.+
T Consensus 75 aDvVvi~ag~~~~-~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv-~tN 124 (317)
T 3d0o_A 75 ADLVVICAGAAQK-PGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLV-ATN 124 (317)
T ss_dssp CSEEEECCCCCCC-TTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEE-CSS
T ss_pred CCEEEECCCCCCC-CCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE-ecC
Confidence 8999986543322 111 1222334433322 389998875 443
No 456
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=82.62 E-value=1.4 Score=42.68 Aligned_cols=95 Identities=13% Similarity=-0.058 Sum_probs=59.6
Q ss_pred CCCCCEEEEee--cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccc----------
Q 038076 139 VPNGPIAIYGL--GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDV---------- 206 (345)
Q Consensus 139 ~~p~~VLiIG~--G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa---------- 206 (345)
.+.++||+.|+ |-|..+..+++.. +.++.+++.+++-.+.++++ +... -+.....|.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~~l-Ga~~---------~i~~~~~~~~~~~~~~~~~ 287 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVRAL-GCDL---------VINRAELGITDDIADDPRR 287 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT-TCCC---------EEEHHHHTCCTTGGGCHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc-CCCE---------EEecccccccccccccccc
Confidence 45678999996 3466677777664 57899999999999999764 4221 111111111
Q ss_pred --------ccccc-cCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 207 --------FSPSE-DASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 207 --------~~~l~-~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
.+.+. .....+|+||--+ . .+.++.+.+.|+++|.++.
T Consensus 288 ~~~~~~~~~~~v~~~~g~g~Dvvid~~-G----------~~~~~~~~~~l~~~G~iv~ 334 (447)
T 4a0s_A 288 VVETGRKLAKLVVEKAGREPDIVFEHT-G----------RVTFGLSVIVARRGGTVVT 334 (447)
T ss_dssp HHHHHHHHHHHHHHHHSSCCSEEEECS-C----------HHHHHHHHHHSCTTCEEEE
T ss_pred cchhhhHHHHHHHHHhCCCceEEEECC-C----------chHHHHHHHHHhcCCEEEE
Confidence 11111 1245799988422 1 1357788889999999874
No 457
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=82.61 E-value=4.2 Score=37.73 Aligned_cols=102 Identities=14% Similarity=0.066 Sum_probs=57.6
Q ss_pred CCEEEEeec--ccHHHHHHHHhC--C---CCEEEEEECCHH-----HHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLW--P---SLKLEGWEIDEI-----LIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP 209 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~--p---~~~v~~VEidp~-----vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~ 209 (345)
.+|.+||+| |+.++..+.+.. + ..+|++++.+++ ..+..++.-.............+++. ..|..+.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 87 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVA-VPDVVQA 87 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEE-ESSHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEE-EcCHHHH
Confidence 479999998 556666666531 0 158999999987 65554442110000000000122332 2232221
Q ss_pred cccCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 210 SEDASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 210 l~~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
-+..|+||+-+. + ....+.++.+...++++.+++.
T Consensus 88 ----~~~aD~Vilav~------~-~~~~~v~~~i~~~l~~~~ivv~ 122 (354)
T 1x0v_A 88 ----AEDADILIFVVP------H-QFIGKICDQLKGHLKANATGIS 122 (354)
T ss_dssp ----HTTCSEEEECCC------G-GGHHHHHHHHTTCSCTTCEEEE
T ss_pred ----HcCCCEEEEeCC------H-HHHHHHHHHHHhhCCCCCEEEE
Confidence 246899998542 2 2557788889888888776553
No 458
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=82.59 E-value=1.3 Score=40.55 Aligned_cols=92 Identities=14% Similarity=0.123 Sum_probs=58.1
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
..+|.+||+| |..++..+.+. +.+|+++|.+++.++...+. + ++ ...|..+. -+ .|
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~~~~~-g-------------~~-~~~~~~~~----~~-aD 72 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW--PGGVTVYDIRIEAMTPLAEA-G-------------AT-LADSVADV----AA-AD 72 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS--TTCEEEECSSTTTSHHHHHT-T-------------CE-ECSSHHHH----TT-SS
T ss_pred CCeEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHC-C-------------CE-EcCCHHHH----Hh-CC
Confidence 3589999998 44566665543 56899999999887766552 1 11 11232222 23 89
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
+||+-+.+ .....+.++.+...++++-++ +++.+..
T Consensus 73 vvi~~vp~------~~~~~~v~~~l~~~l~~g~iv-v~~st~~ 108 (296)
T 3qha_A 73 LIHITVLD------DAQVREVVGELAGHAKPGTVI-AIHSTIS 108 (296)
T ss_dssp EEEECCSS------HHHHHHHHHHHHTTCCTTCEE-EECSCCC
T ss_pred EEEEECCC------hHHHHHHHHHHHHhcCCCCEE-EEeCCCC
Confidence 99985432 223456778888888876654 5666544
No 459
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=82.56 E-value=1.5 Score=41.50 Aligned_cols=92 Identities=16% Similarity=0.186 Sum_probs=55.9
Q ss_pred CCCCCEEEEee--cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEc---ccccccccC
Q 038076 139 VPNGPIAIYGL--GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIG---DVFSPSEDA 213 (345)
Q Consensus 139 ~~p~~VLiIG~--G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~g---Da~~~l~~~ 213 (345)
.+..+||+.|+ |.|..+.++++.. +.+|.+++ +++-.+.+++. +.. .++.. |..+-+..
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~-~~~~~~~~~~l-Ga~------------~v~~~~~~~~~~~~~~- 245 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVC-SQDASELVRKL-GAD------------DVIDYKSGSVEEQLKS- 245 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHT-TCS------------EEEETTSSCHHHHHHT-
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEe-ChHHHHHHHHc-CCC------------EEEECCchHHHHHHhh-
Confidence 35678999993 4667777777765 46899998 67777877653 421 11211 11111221
Q ss_pred CCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 214 SGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 214 ~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
...+|+||--. ... ...++...+.|+++|.++.
T Consensus 246 ~~g~D~vid~~-g~~--------~~~~~~~~~~l~~~G~iv~ 278 (375)
T 2vn8_A 246 LKPFDFILDNV-GGS--------TETWAPDFLKKWSGATYVT 278 (375)
T ss_dssp SCCBSEEEESS-CTT--------HHHHGGGGBCSSSCCEEEE
T ss_pred cCCCCEEEECC-CCh--------hhhhHHHHHhhcCCcEEEE
Confidence 25799988432 210 1235667788999999864
No 460
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=82.53 E-value=6.6 Score=36.47 Aligned_cols=106 Identities=19% Similarity=0.090 Sum_probs=50.3
Q ss_pred CCCCEEEEeec-cc-HHHHHHHHhCCCCEEEEEECCHHHHHH-HHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCc
Q 038076 140 PNGPIAIYGLG-GG-TAAHLMLDLWPSLKLEGWEIDEILIDK-VRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGR 216 (345)
Q Consensus 140 ~p~~VLiIG~G-~G-~~~~~l~~~~p~~~v~~VEidp~vi~~-A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~ 216 (345)
++.+|.+||+| .| +++..+.......+|..+|+|++.++- +.+.-.... ...++++..+| .+ .-+.
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~------~~~~~~i~~~~-~~----a~~~ 74 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLP------FMGQMSLYAGD-YS----DVKD 74 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCC------CTTCEEEC--C-GG----GGTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHH------hcCCeEEEECC-HH----HhCC
Confidence 35789999986 22 333333332122489999999876552 333221111 11355565444 22 1356
Q ss_pred ccEEEEcCCCCCCCCCC------cch----HHHHHHHHhccCCCcEEEEEecC
Q 038076 217 YAGIVVDLFSEGKVLPQ------LEE----VATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 217 yD~Ii~D~f~~~~~p~~------l~t----~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
-|+|++-+..+.. |.. ..+ .+..+.+.+. +|++++++ +.+
T Consensus 75 aDvVii~~g~p~k-~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv-~tN 124 (318)
T 1y6j_A 75 CDVIVVTAGANRK-PGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILV-VSN 124 (318)
T ss_dssp CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEE-CSS
T ss_pred CCEEEEcCCCCCC-CCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEE-ecC
Confidence 8999986533221 111 111 2334444444 79998775 433
No 461
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=82.52 E-value=6.8 Score=35.66 Aligned_cols=92 Identities=9% Similarity=0.126 Sum_probs=52.8
Q ss_pred CCCCEEEEeec-ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE-cccccccccCCCcc
Q 038076 140 PNGPIAIYGLG-GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI-GDVFSPSEDASGRY 217 (345)
Q Consensus 140 ~p~~VLiIG~G-~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~-gDa~~~l~~~~~~y 217 (345)
..++|++||+| .|......++.+ +.+|+++|.++.-.+.+++ ++ .+.+. .+ +.+.-+..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~-~g-------------~~~~~~~~----l~~~l~~a 214 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAAL-GAKVKVGARESDLLARIAE-MG-------------MEPFHISK----AAQELRDV 214 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH-TT-------------SEEEEGGG----HHHHTTTC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHH-CC-------------CeecChhh----HHHHhcCC
Confidence 56899999987 233222233334 4699999999876554443 22 12221 12 22223579
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
|+|++-+ |.++...+.+ +.++|++++ +|+....
T Consensus 215 DvVi~~~------p~~~i~~~~l----~~mk~~~~l-in~ar~~ 247 (293)
T 3d4o_A 215 DVCINTI------PALVVTANVL----AEMPSHTFV-IDLASKP 247 (293)
T ss_dssp SEEEECC------SSCCBCHHHH----HHSCTTCEE-EECSSTT
T ss_pred CEEEECC------ChHHhCHHHH----HhcCCCCEE-EEecCCC
Confidence 9999843 3345555443 357777655 6887543
No 462
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=82.47 E-value=4.5 Score=39.53 Aligned_cols=109 Identities=15% Similarity=0.154 Sum_probs=62.0
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCC-------CCCCcEEEEEcccccccc
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPT-------ATGGVLQVHIGDVFSPSE 211 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~-------~~~~rv~v~~gDa~~~l~ 211 (345)
..+.-+||+| |..++..+.+. +.+|+++|+|++.++..++-- .+-.+... ....+++.- .|
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~--G~~V~~~D~~~~kv~~L~~g~-~pi~epgl~~ll~~~~~~g~l~~t-td------ 80 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKH--GVDVLGVDINQQTIDKLQNGQ-ISIEEPGLQEVYEEVLSSGKLKVS-TT------ 80 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTC-CSSCCTTHHHHHHHHHHTTCEEEE-SS------
T ss_pred CCccEEEeeCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHCCC-CCcCCCCHHHHHHhhcccCceEEe-Cc------
Confidence 4578899999 44566666653 579999999999998766531 11100000 001233322 22
Q ss_pred cCCCcccEEEEcCCCCCCC----CCCc-chHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 212 DASGRYAGIVVDLFSEGKV----LPQL-EEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 212 ~~~~~yD~Ii~D~f~~~~~----p~~l-~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
.+.-|+||+-+.++... .+.+ +-.+..+.+.+.|++|- ++++..+.+.
T Consensus 81 --~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~-iVV~~STV~p 133 (431)
T 3ojo_A 81 --PEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGN-TIIVESTIAP 133 (431)
T ss_dssp --CCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTE-EEEECSCCCT
T ss_pred --hhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCC-EEEEecCCCh
Confidence 23589999977665321 0112 22344567888888875 4456555554
No 463
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=82.39 E-value=11 Score=34.30 Aligned_cols=38 Identities=18% Similarity=0.155 Sum_probs=25.2
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHH
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILID 178 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~ 178 (345)
+.+|.+||+| |+.++..+.......+|+.+|++++..+
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~ 46 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVE 46 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHH
Confidence 4689999997 3344444444211128999999997665
No 464
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=82.06 E-value=2.9 Score=38.37 Aligned_cols=98 Identities=8% Similarity=0.122 Sum_probs=56.6
Q ss_pred CEEEEeec--ccHHHHHHHHhCCCCEEEEEEC--CHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEc-ccccccccCCCcc
Q 038076 143 PIAIYGLG--GGTAAHLMLDLWPSLKLEGWEI--DEILIDKVRDYFGLSDLEKPTATGGVLQVHIG-DVFSPSEDASGRY 217 (345)
Q Consensus 143 ~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEi--dp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~g-Da~~~l~~~~~~y 217 (345)
+|.+||+| |+.++..+.+. +.+|++++. +++.++..++........ ..-+++++... |..+ .-+..
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~----~~~~~ 72 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN--GNEVRIWGTEFDTEILKSISAGREHPRLG---VKLNGVEIFWPEQLEK----CLENA 72 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH--CCEEEEECCGGGHHHHHHHHTTCCBTTTT---BCCCSEEEECGGGHHH----HHTTC
T ss_pred EEEEECcCHHHHHHHHHHHhC--CCeEEEEEccCCHHHHHHHHHhCcCcccC---ccccceEEecHHhHHH----HHhcC
Confidence 68999998 45666666654 468999999 998877665532101000 00012222210 2111 12468
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
|+||+-+.. . ...+.++.+.. |+++.+++ .+.
T Consensus 73 D~vi~~v~~------~-~~~~v~~~i~~-l~~~~~vv-~~~ 104 (335)
T 1txg_A 73 EVVLLGVST------D-GVLPVMSRILP-YLKDQYIV-LIS 104 (335)
T ss_dssp SEEEECSCG------G-GHHHHHHHHTT-TCCSCEEE-ECC
T ss_pred CEEEEcCCh------H-HHHHHHHHHhc-CCCCCEEE-EEc
Confidence 999985422 2 45778888888 88876554 443
No 465
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=81.98 E-value=13 Score=34.08 Aligned_cols=101 Identities=17% Similarity=0.109 Sum_probs=50.9
Q ss_pred CEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHH-HHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 143 PIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDK-VRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 143 ~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~-A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
+|.+||+| |.+++..+.......+|..+|+|++.++. +.+.-.... .....++..+|. + .-+..|+
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~------~~~~~~i~~~~~-~----a~~~aDv 70 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAP------VSHGTRVWHGGH-S----ELADAQV 70 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCC------TTSCCEEEEECG-G----GGTTCSE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhh------hcCCeEEEECCH-H----HhCCCCE
Confidence 68999987 33444444432112389999999986653 333221111 012344443442 2 1256899
Q ss_pred EEEcCCCCCCCC---CCc--ch----HHHHHHHHhccCCCcEEEE
Q 038076 220 IVVDLFSEGKVL---PQL--EE----VATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 220 Ii~D~f~~~~~p---~~l--~t----~ef~~~~~~~L~pgGvlvv 255 (345)
|++-+..+...- ..+ .+ .+.++.+.+. .|++++++
T Consensus 71 VIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~ 114 (304)
T 2v6b_A 71 VILTAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLV 114 (304)
T ss_dssp EEECC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEE
T ss_pred EEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 998653221100 001 12 4455556655 69998764
No 466
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=81.91 E-value=5.8 Score=36.36 Aligned_cols=93 Identities=13% Similarity=0.138 Sum_probs=55.9
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
..+|.+||+| |..+++.+.+. +.+|+++|.+++-.+.+.+. +. + ...|..+.+ +..|
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~~~~~-g~-------------~-~~~~~~e~~----~~aD 67 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQ--GKRVAIWNRSPGKAAALVAA-GA-------------H-LCESVKAAL----SASP 67 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHH-TC-------------E-ECSSHHHHH----HHSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHC-CC-------------e-ecCCHHHHH----hcCC
Confidence 4689999998 56677777653 46899999999988776553 21 1 112333322 3479
Q ss_pred EEEEcCCCCCCCCCCcchHHHHH--HHHhccCCCcEEEEEecCCCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWL--KLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~--~~~~~L~pgGvlvvn~~~~~~ 262 (345)
+||+-+.++ ....+.+. .+.. +++ |.+++++.+...
T Consensus 68 vVi~~vp~~------~~~~~v~~~~~l~~-~~~-g~ivid~st~~~ 105 (306)
T 3l6d_A 68 ATIFVLLDN------HATHEVLGMPGVAR-ALA-HRTIVDYTTNAQ 105 (306)
T ss_dssp EEEECCSSH------HHHHHHHTSTTHHH-HTT-TCEEEECCCCCT
T ss_pred EEEEEeCCH------HHHHHHhcccchhh-ccC-CCEEEECCCCCH
Confidence 999854332 12233343 3332 444 556678876655
No 467
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=81.83 E-value=1.3 Score=41.33 Aligned_cols=93 Identities=15% Similarity=0.106 Sum_probs=52.4
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE-----cccccccccC
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI-----GDVFSPSEDA 213 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~-----gDa~~~l~~~ 213 (345)
..+|++||+| |+.++..|.+. +.+|+.++.++. .+..++. ++.. ..+..+... .|...
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~--g~~V~~~~r~~~-~~~~~~~-g~~~------~~~~~~~~~~~~~~~~~~~----- 67 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALA--GEAINVLARGAT-LQALQTA-GLRL------TEDGATHTLPVRATHDAAA----- 67 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHT--TCCEEEECCHHH-HHHHHHT-CEEE------EETTEEEEECCEEESCHHH-----
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCEEEEEEChHH-HHHHHHC-CCEE------ecCCCeEEEeeeEECCHHH-----
Confidence 3589999998 55666666653 468999998644 4433332 2110 011111111 11111
Q ss_pred CCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 214 SGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 214 ~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
-+.+|+||+-+ +. ....+.++.++..++|+.+++.
T Consensus 68 ~~~~D~Vilav------k~-~~~~~~~~~l~~~l~~~~~iv~ 102 (335)
T 3ghy_A 68 LGEQDVVIVAV------KA-PALESVAAGIAPLIGPGTCVVV 102 (335)
T ss_dssp HCCCSEEEECC------CH-HHHHHHHGGGSSSCCTTCEEEE
T ss_pred cCCCCEEEEeC------Cc-hhHHHHHHHHHhhCCCCCEEEE
Confidence 25699999843 22 2445777777788888776653
No 468
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=81.67 E-value=5 Score=35.56 Aligned_cols=102 Identities=15% Similarity=0.063 Sum_probs=51.3
Q ss_pred HHHhhcccc--CCCCCEEEEeecccH--HHHHHHHhCCCCEEEEEE--CCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE
Q 038076 130 DEFVSLPAI--VPNGPIAIYGLGGGT--AAHLMLDLWPSLKLEGWE--IDEILIDKVRDYFGLSDLEKPTATGGVLQVHI 203 (345)
Q Consensus 130 ~~~~~l~~~--~~p~~VLiIG~G~G~--~~~~l~~~~p~~~v~~VE--idp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~ 203 (345)
..|..+|.+ ...++||++|+|.=. -++.|++. +.+|++|+ +++++.+++.+ .+++++.
T Consensus 18 ~~~~~~Pifl~L~gk~VLVVGgG~va~~ka~~Ll~~--GA~VtVvap~~~~~l~~l~~~--------------~~i~~i~ 81 (223)
T 3dfz_A 18 EGRHMYTVMLDLKGRSVLVVGGGTIATRRIKGFLQE--GAAITVVAPTVSAEINEWEAK--------------GQLRVKR 81 (223)
T ss_dssp ----CCEEEECCTTCCEEEECCSHHHHHHHHHHGGG--CCCEEEECSSCCHHHHHHHHT--------------TSCEEEC
T ss_pred cccCccccEEEcCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCCCHHHHHHHHc--------------CCcEEEE
Confidence 456667754 468999999988322 22334332 57888885 45566555542 2355554
Q ss_pred cccccccccCCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 204 GDVFSPSEDASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 204 gDa~~~l~~~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
++ |-...-..+|+||....+. +.=..+...-+ .|++ +|+...+.
T Consensus 82 ~~---~~~~dL~~adLVIaAT~d~----------~~N~~I~~~ak-~gi~-VNvvD~p~ 125 (223)
T 3dfz_A 82 KK---VGEEDLLNVFFIVVATNDQ----------AVNKFVKQHIK-NDQL-VNMASSFS 125 (223)
T ss_dssp SC---CCGGGSSSCSEEEECCCCT----------HHHHHHHHHSC-TTCE-EEC-----
T ss_pred CC---CCHhHhCCCCEEEECCCCH----------HHHHHHHHHHh-CCCE-EEEeCCcc
Confidence 33 3223335799999742221 12223333334 6887 57665543
No 469
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=81.54 E-value=6.8 Score=38.75 Aligned_cols=113 Identities=23% Similarity=0.292 Sum_probs=63.9
Q ss_pred CCCCEEEEeec--ccHHHHHHHHhCCCC-EEEEEECCHH----HHHHHHHhcCCCCC--CCCCC--------CCCcEEEE
Q 038076 140 PNGPIAIYGLG--GGTAAHLMLDLWPSL-KLEGWEIDEI----LIDKVRDYFGLSDL--EKPTA--------TGGVLQVH 202 (345)
Q Consensus 140 ~p~~VLiIG~G--~G~~~~~l~~~~p~~-~v~~VEidp~----vi~~A~~~f~~~~~--~~~~~--------~~~rv~v~ 202 (345)
+..+|.+||+| |..++..+.+. |+. +|+++|+|++ .++..++.- .+. ..... ...+++.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~-~G~~~V~~~D~~~~~~~~kv~~l~~g~--~~i~~~e~gl~~l~~~~~~~g~l~~- 92 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADA-PCFEKVLGFQRNSKSSGYKIEMLNRGE--SPLKGEEPGLEELIGKVVKAGKFEC- 92 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHS-TTCCEEEEECCCCTTTTTHHHHHTTTC--CCSSCCGGGHHHHHHHHHHTTCEEE-
T ss_pred CCCEEEEECcCHHHHHHHHHHHHh-CCCCeEEEEECChhHhHHHHHHHHhcC--CCccccCCCHHHHHHhhcccCCeEE-
Confidence 34689999999 44555555553 466 9999999999 777655421 110 00000 0233433
Q ss_pred EcccccccccCCCcccEEEEcCCCCCCCC----CCc-chHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 203 IGDVFSPSEDASGRYAGIVVDLFSEGKVL----PQL-EEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 203 ~gDa~~~l~~~~~~yD~Ii~D~f~~~~~p----~~l-~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
..| .+- -+..|+||+-+.++...- +.+ +-.+..+.+.+.|++|-++ ++..+.+.
T Consensus 93 ttd-~ea----~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iV-V~~STv~p 151 (478)
T 3g79_A 93 TPD-FSR----ISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLV-VLESTITP 151 (478)
T ss_dssp ESC-GGG----GGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEE-EECSCCCT
T ss_pred eCc-HHH----HhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEE-EEeCCCCh
Confidence 233 222 245799999776653211 122 2234567788889887654 56655544
No 470
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=81.46 E-value=2.2 Score=43.07 Aligned_cols=67 Identities=19% Similarity=0.244 Sum_probs=46.9
Q ss_pred CCcccEEEEcCCCCCCCCCCcc--------hHHH-HHHHHhccCCCcEEEEEecCCCCCCccccCCCCCCCccchHHHHH
Q 038076 214 SGRYAGIVVDLFSEGKVLPQLE--------EVAT-WLKLKDRLMPNGRFMVNCGGIDGVSDMTYGAARPKSMNDVWMHNS 284 (345)
Q Consensus 214 ~~~yD~Ii~D~f~~~~~p~~l~--------t~ef-~~~~~~~L~pgGvlvvn~~~~~~~~~~~~g~~~~~~~d~~~~~~~ 284 (345)
..+||+||+|+-.+.. .|-| .... -....++|+|||.+++-..+.-. +..+.
T Consensus 219 ~~ryDlvfvn~~t~yr--~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyAD-----------------r~sE~ 279 (670)
T 4gua_A 219 QARYDLVFINIGTKYR--NHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYAD-----------------RNSED 279 (670)
T ss_dssp CCCEEEEEECCCCCCC--SCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCS-----------------HHHHH
T ss_pred CCcccEEEEecCCCcc--cchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeeccc-----------------cchHH
Confidence 4699999999866421 2212 1112 23567789999999988877664 56789
Q ss_pred HHHHHHHHCCCCEEEE
Q 038076 285 AIRALSEAFPGKVSWK 300 (345)
Q Consensus 285 ~~~~l~~~F~~~v~~~ 300 (345)
++.++.+-|. .+.+.
T Consensus 280 vv~alaRkF~-~~rv~ 294 (670)
T 4gua_A 280 VVTALARKFV-RVSAA 294 (670)
T ss_dssp HHHHHHHTEE-EEEEE
T ss_pred HHHHHHhhee-eeeee
Confidence 9999999998 55543
No 471
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=81.32 E-value=8.3 Score=33.96 Aligned_cols=77 Identities=18% Similarity=0.116 Sum_probs=47.8
Q ss_pred CCCCEEEEeeccc-----HHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccc---
Q 038076 140 PNGPIAIYGLGGG-----TAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSE--- 211 (345)
Q Consensus 140 ~p~~VLiIG~G~G-----~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~--- 211 (345)
..+++|+.|++++ .+++.+++ .+.+|.+++.++...+..++..... ...++.++..|..+.-.
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~v~~ 76 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHE--AGARLIFTYAGERLEKSVHELAGTL-------DRNDSIILPCDVTNDAEIET 76 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH--TTCEEEEEESSGGGHHHHHHHHHTS-------SSCCCEEEECCCSSSHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH--CCCEEEEecCchHHHHHHHHHHHhc-------CCCCceEEeCCCCCHHHHHH
Confidence 3578999997633 24445544 3678999998876555544433211 13478899999876411
Q ss_pred ---c---CCCcccEEEEcCC
Q 038076 212 ---D---ASGRYAGIVVDLF 225 (345)
Q Consensus 212 ---~---~~~~yD~Ii~D~f 225 (345)
. ..++.|+++..+-
T Consensus 77 ~~~~~~~~~g~id~li~~Ag 96 (266)
T 3oig_A 77 CFASIKEQVGVIHGIAHCIA 96 (266)
T ss_dssp HHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHhCCeeEEEEccc
Confidence 0 1247899998653
No 472
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=81.14 E-value=3.8 Score=37.18 Aligned_cols=101 Identities=15% Similarity=0.085 Sum_probs=54.9
Q ss_pred CCEEEEeec--ccHHHHHHHHhC--C-C-CEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccc--cC
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLW--P-S-LKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSE--DA 213 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~--p-~-~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~--~~ 213 (345)
.+|.+||+| |+.++..|.+.. + + .+|++++. ++.++..++..+..-. ..+... ..... .... ..
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~-----~~~~~~-~~~~~-~~~~~~~~ 80 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVV-----TPSRDF-LARPT-CVTDNPAE 80 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEE-----CSSCEE-EECCS-EEESCHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEE-----eCCCCe-EEecc-eEecCccc
Confidence 579999999 556666666530 1 4 68999998 7666555441121100 000000 00000 0000 01
Q ss_pred CCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEec
Q 038076 214 SGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCG 258 (345)
Q Consensus 214 ~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~ 258 (345)
-+.+|+||+-+... ...+.++.++..++++.++ +.+.
T Consensus 81 ~~~~D~vil~vk~~-------~~~~v~~~i~~~l~~~~~i-v~~~ 117 (317)
T 2qyt_A 81 VGTVDYILFCTKDY-------DMERGVAEIRPMIGQNTKI-LPLL 117 (317)
T ss_dssp HCCEEEEEECCSSS-------CHHHHHHHHGGGEEEEEEE-EECS
T ss_pred cCCCCEEEEecCcc-------cHHHHHHHHHhhcCCCCEE-EEcc
Confidence 25799999854332 2467888888888876654 4443
No 473
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=80.70 E-value=1.5 Score=40.55 Aligned_cols=88 Identities=19% Similarity=0.199 Sum_probs=56.3
Q ss_pred CEEEEee--cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEc-cc-cccccc-CCCcc
Q 038076 143 PIAIYGL--GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIG-DV-FSPSED-ASGRY 217 (345)
Q Consensus 143 ~VLiIG~--G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~g-Da-~~~l~~-~~~~y 217 (345)
+||++|+ |.|..+..+++.. +.+|.+++.+++-.+.+++ ++.. .++.. |. .+.++. ....+
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~-lGa~------------~v~~~~~~~~~~~~~~~~~~~ 218 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQ-LGAS------------EVISREDVYDGTLKALSKQQW 218 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHH-HTCS------------EEEEHHHHCSSCCCSSCCCCE
T ss_pred eEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH-cCCc------------EEEECCCchHHHHHHhhcCCc
Confidence 8999996 4566666766654 4689999999888888877 4422 11111 11 111221 23579
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
|+|+- ... .+.++.+.+.|+++|.++.
T Consensus 219 d~vid-~~g----------~~~~~~~~~~l~~~G~iv~ 245 (330)
T 1tt7_A 219 QGAVD-PVG----------GKQLASLLSKIQYGGSVAV 245 (330)
T ss_dssp EEEEE-SCC----------THHHHHHHTTEEEEEEEEE
T ss_pred cEEEE-CCc----------HHHHHHHHHhhcCCCEEEE
Confidence 98874 221 1357788899999999874
No 474
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=80.58 E-value=5.7 Score=41.26 Aligned_cols=106 Identities=15% Similarity=0.067 Sum_probs=64.0
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcC-----CCCCCCCCC-----CCCcEEEEEccccc
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFG-----LSDLEKPTA-----TGGVLQVHIGDVFS 208 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~-----~~~~~~~~~-----~~~rv~v~~gDa~~ 208 (345)
.++|.+||+| |+.++..+.+. +.+|+++|++++.++.++++.. +........ ...+++.. .|. +
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~a--G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~-~d~-~ 389 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASK--GTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPT-LSY-G 389 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEE-SSS-T
T ss_pred CCEEEEECCChhhHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEE-CCH-H
Confidence 4689999998 55666666653 5789999999998887644321 000000000 00123322 232 2
Q ss_pred ccccCCCcccEEEEcCCCCCCCCCCc-chHHHHHHHHhccCCCcEEEEEecCC
Q 038076 209 PSEDASGRYAGIVVDLFSEGKVLPQL-EEVATWLKLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 209 ~l~~~~~~yD~Ii~D~f~~~~~p~~l-~t~ef~~~~~~~L~pgGvlvvn~~~~ 260 (345)
- -+.-|+||.-++. .+ ...+.++.+...++|+-+++.|..+.
T Consensus 390 ~----~~~aDlVIeaV~e------~~~vk~~v~~~l~~~~~~~~IlasntStl 432 (715)
T 1wdk_A 390 D----FGNVDLVVEAVVE------NPKVKQAVLAEVENHVREDAILASNTSTI 432 (715)
T ss_dssp T----GGGCSEEEECCCS------CHHHHHHHHHHHHTTSCTTCEEEECCSSS
T ss_pred H----HCCCCEEEEcCCC------CHHHHHHHHHHHHhhCCCCeEEEeCCCCC
Confidence 1 2467999985533 22 24578888999999998887776543
No 475
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=80.44 E-value=2.5 Score=37.54 Aligned_cols=35 Identities=29% Similarity=0.252 Sum_probs=26.9
Q ss_pred CCCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHH
Q 038076 140 PNGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEIL 176 (345)
Q Consensus 140 ~p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~v 176 (345)
..++|.+||+| |+.++..+.+. +.+|++++.+++-
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~--G~~V~~~~r~~~~ 54 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADL--GHEVTIGTRDPKA 54 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC--CCEEEEEeCChhh
Confidence 35789999988 55677676653 5689999999985
No 476
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=80.43 E-value=3.9 Score=37.59 Aligned_cols=90 Identities=12% Similarity=-0.036 Sum_probs=56.2
Q ss_pred CCCCCEEEEe-e-cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccc-ccccCCC
Q 038076 139 VPNGPIAIYG-L-GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFS-PSEDASG 215 (345)
Q Consensus 139 ~~p~~VLiIG-~-G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~-~l~~~~~ 215 (345)
.+..+||++| + |.|..+.++++.. +.+|.++.- ++-.+.++++ +.. .++..+-.+ +. ..-+
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~~-~~~~~~~~~l-Ga~------------~~i~~~~~~~~~-~~~~ 214 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTAS-KRNHAFLKAL-GAE------------QCINYHEEDFLL-AIST 214 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEEC-HHHHHHHHHH-TCS------------EEEETTTSCHHH-HCCS
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEec-cchHHHHHHc-CCC------------EEEeCCCcchhh-hhcc
Confidence 4567899997 3 4577777888765 468888875 4447888774 422 122221112 21 1225
Q ss_pred cccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 216 RYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 216 ~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
.+|+|+- ... .+.++.+.+.|+++|.++.
T Consensus 215 g~D~v~d-~~g----------~~~~~~~~~~l~~~G~iv~ 243 (321)
T 3tqh_A 215 PVDAVID-LVG----------GDVGIQSIDCLKETGCIVS 243 (321)
T ss_dssp CEEEEEE-SSC----------HHHHHHHGGGEEEEEEEEE
T ss_pred CCCEEEE-CCC----------cHHHHHHHHhccCCCEEEE
Confidence 7999884 211 1234788899999999874
No 477
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=79.74 E-value=4.6 Score=30.42 Aligned_cols=69 Identities=14% Similarity=0.124 Sum_probs=41.9
Q ss_pred CCCEEEEeecc-c-HHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccc--cccCCCc
Q 038076 141 NGPIAIYGLGG-G-TAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSP--SEDASGR 216 (345)
Q Consensus 141 p~~VLiIG~G~-G-~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~--l~~~~~~ 216 (345)
.++|+++|+|. | .++..+.+ .+..+|++++.+++-.+..++ .+++++..|..+. +...-+.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~-~g~~~v~~~~r~~~~~~~~~~--------------~~~~~~~~d~~~~~~~~~~~~~ 69 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKT-SSNYSVTVADHDLAALAVLNR--------------MGVATKQVDAKDEAGLAKALGG 69 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-CSSEEEEEEESCHHHHHHHHT--------------TTCEEEECCTTCHHHHHHHTTT
T ss_pred cCeEEEECCCHHHHHHHHHHHh-CCCceEEEEeCCHHHHHHHHh--------------CCCcEEEecCCCHHHHHHHHcC
Confidence 35899999841 2 23333333 333789999999987776551 1355666676542 1122347
Q ss_pred ccEEEEcC
Q 038076 217 YAGIVVDL 224 (345)
Q Consensus 217 yD~Ii~D~ 224 (345)
+|+||.-.
T Consensus 70 ~d~vi~~~ 77 (118)
T 3ic5_A 70 FDAVISAA 77 (118)
T ss_dssp CSEEEECS
T ss_pred CCEEEECC
Confidence 89999743
No 478
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=79.39 E-value=2.6 Score=39.48 Aligned_cols=85 Identities=16% Similarity=0.154 Sum_probs=55.0
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHH-HHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEIL-IDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~v-i~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
.++|.+||+| |+.++..+.+. +.+|.+++.++.- .+.+++. + +++. |..+.+ +..
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~--G~~V~~~~~~~~~~~~~a~~~-G-------------~~~~--~~~e~~----~~a 73 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDS--GVDVTVGLRSGSATVAKAEAH-G-------------LKVA--DVKTAV----AAA 73 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT--TCCEEEECCTTCHHHHHHHHT-T-------------CEEE--CHHHHH----HTC
T ss_pred CCEEEEECchHHHHHHHHHHHHC--cCEEEEEECChHHHHHHHHHC-C-------------CEEc--cHHHHH----hcC
Confidence 4689999998 66777777653 4678999998754 5665542 2 2222 332322 357
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHH-HHHhccCCCcEEE
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWL-KLKDRLMPNGRFM 254 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~-~~~~~L~pgGvlv 254 (345)
|+|++-+ |+. ...+.++ .+...|+||-+++
T Consensus 74 DvVilav------p~~-~~~~v~~~~i~~~l~~~~ivi 104 (338)
T 1np3_A 74 DVVMILT------PDE-FQGRLYKEEIEPNLKKGATLA 104 (338)
T ss_dssp SEEEECS------CHH-HHHHHHHHHTGGGCCTTCEEE
T ss_pred CEEEEeC------CcH-HHHHHHHHHHHhhCCCCCEEE
Confidence 9999843 322 2367777 7888898887665
No 479
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=78.94 E-value=2.5 Score=36.60 Aligned_cols=71 Identities=15% Similarity=0.149 Sum_probs=45.9
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
..+|.+||+| |+.++..+.+. +.+|+++|.+++ .-+..|
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~--g~~V~~~~~~~~-------------------------------------~~~~aD 59 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIA--GHEVTYYGSKDQ-------------------------------------ATTLGE 59 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCEEEEECTTCC-------------------------------------CSSCCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHH-------------------------------------HhccCC
Confidence 4689999988 55666666553 468888886544 124579
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+|++-+. .....+.++.+...++ |.+++++.+
T Consensus 60 ~vi~av~-------~~~~~~v~~~l~~~~~--~~~vi~~~~ 91 (209)
T 2raf_A 60 IVIMAVP-------YPALAALAKQYATQLK--GKIVVDITN 91 (209)
T ss_dssp EEEECSC-------HHHHHHHHHHTHHHHT--TSEEEECCC
T ss_pred EEEEcCC-------cHHHHHHHHHHHHhcC--CCEEEEECC
Confidence 9998542 1234577777777777 556666655
No 480
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=78.90 E-value=2.4 Score=38.79 Aligned_cols=76 Identities=18% Similarity=0.164 Sum_probs=50.5
Q ss_pred CCEEEEe-ec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 142 GPIAIYG-LG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 142 ~~VLiIG-~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
++|.+|| +| |+.++..+.+. +.+|+++|.++.. |..+ .-+..|
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~--G~~V~~~~~~~~~----------------------------~~~~----~~~~aD 67 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS--GYPISILDREDWA----------------------------VAES----ILANAD 67 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT--TCCEEEECTTCGG----------------------------GHHH----HHTTCS
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC--CCeEEEEECCccc----------------------------CHHH----HhcCCC
Confidence 5899999 88 66777777653 4579999877641 1111 124689
Q ss_pred EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
+||+-+ |+. ...+.++.+...|+++. +++++.+
T Consensus 68 vVilav------p~~-~~~~vl~~l~~~l~~~~-iv~~~~s 100 (298)
T 2pv7_A 68 VVIVSV------PIN-LTLETIERLKPYLTENM-LLADLTS 100 (298)
T ss_dssp EEEECS------CGG-GHHHHHHHHGGGCCTTS-EEEECCS
T ss_pred EEEEeC------CHH-HHHHHHHHHHhhcCCCc-EEEECCC
Confidence 999844 222 36788888888888765 5556643
No 481
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=78.65 E-value=3.1 Score=40.68 Aligned_cols=123 Identities=11% Similarity=0.063 Sum_probs=60.4
Q ss_pred HHHHHhhccccC---CCCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCC------CC
Q 038076 128 YWDEFVSLPAIV---PNGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTA------TG 196 (345)
Q Consensus 128 Y~~~~~~l~~~~---~p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~------~~ 196 (345)
....|...+... ...+|.+||+| |..++..+.+ +.+|+++|+|++.++..++.. .+...... ..
T Consensus 20 ~~~~~~~~~~~~r~~~~mkIaVIGlG~mG~~lA~~La~---G~~V~~~D~~~~~v~~l~~g~--~~i~e~~l~~ll~~~~ 94 (432)
T 3pid_A 20 HMASMTGGQQMGRGSEFMKITISGTGYVGLSNGVLIAQ---NHEVVALDIVQAKVDMLNQKI--SPIVDKEIQEYLAEKP 94 (432)
T ss_dssp ---------------CCCEEEEECCSHHHHHHHHHHHT---TSEEEEECSCHHHHHHHHTTC--CSSCCHHHHHHHHHSC
T ss_pred hhhhccCCcccccccCCCEEEEECcCHHHHHHHHHHHc---CCeEEEEecCHHHhhHHhccC--CccccccHHHHHhhcc
Confidence 334455555432 34589999998 4455554443 679999999999998776632 11000000 01
Q ss_pred CcEEEEEcccccccccCCCcccEEEEcCCCCCCC----CCCcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 197 GVLQVHIGDVFSPSEDASGRYAGIVVDLFSEGKV----LPQLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 197 ~rv~v~~gDa~~~l~~~~~~yD~Ii~D~f~~~~~----p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
.++++ ..|..+- -+.-|+||+-+..+... +.--+-.+..+.+.+ |+||-+++ +..+...
T Consensus 95 ~~l~~-ttd~~ea----~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV-~~STv~p 157 (432)
T 3pid_A 95 LNFRA-TTDKHDA----YRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMI-IKSTIPV 157 (432)
T ss_dssp CCEEE-ESCHHHH----HTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEE-ECSCCCT
T ss_pred CCeEE-EcCHHHH----HhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEE-EeCCCCh
Confidence 12322 1232222 24579999866543110 111133456677888 88876654 5554443
No 482
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=78.39 E-value=2.5 Score=39.44 Aligned_cols=61 Identities=11% Similarity=-0.104 Sum_probs=47.9
Q ss_pred CCCCEEEEeecccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccc
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPS 210 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l 210 (345)
+..-||+--||+|+++.+..+. +.+..++|++|..++++++.+.... .....+.+|+++..
T Consensus 252 ~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~~~~~~~~~r~~~~~--------~~~~~~~~~~~~i~ 312 (323)
T 1boo_A 252 PDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKPEYVAASAFRFLDNN--------ISEEKITDIYNRIL 312 (323)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHGGGSCSC--------SCHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCHHHHHHHHHHHHhcc--------cchHHHHHHHHHHH
Confidence 4567999999999999988875 6799999999999999999986432 23555566666653
No 483
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=78.36 E-value=2 Score=41.82 Aligned_cols=102 Identities=10% Similarity=-0.044 Sum_probs=60.4
Q ss_pred CCCCCEEEEee--cccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEE----cccc-----
Q 038076 139 VPNGPIAIYGL--GGGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHI----GDVF----- 207 (345)
Q Consensus 139 ~~p~~VLiIG~--G~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~----gDa~----- 207 (345)
.+..+||++|+ |.|.++.++++.. +.++.+++.+++-.+.+++. +..... .+.++.+.+.. .|..
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~l-Ga~~vi--~~~~~d~~~~~~~~~~~~~~~~~~ 302 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRAM-GAEAII--DRNAEGYRFWKDENTQDPKEWKRF 302 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH-TCCEEE--ETTTTTCCSEEETTEECHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHhh-CCcEEE--ecCcCcccccccccccchHHHHHH
Confidence 45678999996 3567777777765 57888999999999999774 422100 00000000000 0000
Q ss_pred -ccccc--CCCcccEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEE
Q 038076 208 -SPSED--ASGRYAGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMV 255 (345)
Q Consensus 208 -~~l~~--~~~~yD~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvv 255 (345)
+-+.. ....+|+|+--. . .+.++.+.+.|+++|.++.
T Consensus 303 ~~~i~~~t~g~g~Dvvid~~-G----------~~~~~~~~~~l~~~G~iv~ 342 (456)
T 3krt_A 303 GKRIRELTGGEDIDIVFEHP-G----------RETFGASVFVTRKGGTITT 342 (456)
T ss_dssp HHHHHHHHTSCCEEEEEECS-C----------HHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHhCCCCCcEEEEcC-C----------chhHHHHHHHhhCCcEEEE
Confidence 11111 246899887421 1 2568888899999999874
No 484
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=77.96 E-value=13 Score=31.27 Aligned_cols=99 Identities=12% Similarity=0.001 Sum_probs=55.2
Q ss_pred CEEEEeeccc---HHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 143 PIAIYGLGGG---TAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 143 ~VLiIG~G~G---~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
+||+.|+.|+ .+++.|++ .+.+|.++..++.-.+. .. .++++++.+|..+.-...-+..|+
T Consensus 2 kilVtGatG~iG~~l~~~L~~--~g~~V~~~~R~~~~~~~---~~-----------~~~~~~~~~D~~d~~~~~~~~~d~ 65 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARR--RGHEVLAVVRDPQKAAD---RL-----------GATVATLVKEPLVLTEADLDSVDA 65 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHHH---HT-----------CTTSEEEECCGGGCCHHHHTTCSE
T ss_pred EEEEEcCCCHHHHHHHHHHHH--CCCEEEEEEeccccccc---cc-----------CCCceEEecccccccHhhcccCCE
Confidence 5899986433 23334443 25799999999875442 11 246889999987752222256899
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEe
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNC 257 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~ 257 (345)
||.-+.............+....+.+.++..|.=++++
T Consensus 66 vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 66 VVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp EEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred EEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 99865332111111223344555666665544333344
No 485
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=77.68 E-value=3.4 Score=40.63 Aligned_cols=69 Identities=17% Similarity=0.157 Sum_probs=48.8
Q ss_pred CCCCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccc--cccc-C
Q 038076 139 VPNGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFS--PSED-A 213 (345)
Q Consensus 139 ~~p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~--~l~~-~ 213 (345)
.+.++|+++|+| |-.+++.|. ...+|..+|.|++-.+...+.+ ++..+++||+.+ .|.+ .
T Consensus 233 ~~~~~v~I~GgG~ig~~lA~~L~---~~~~v~iIE~d~~r~~~la~~l------------~~~~Vi~GD~td~~~L~ee~ 297 (461)
T 4g65_A 233 KPYRRIMIVGGGNIGASLAKRLE---QTYSVKLIERNLQRAEKLSEEL------------ENTIVFCGDAADQELLTEEN 297 (461)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHT---TTSEEEEEESCHHHHHHHHHHC------------TTSEEEESCTTCHHHHHHTT
T ss_pred ccccEEEEEcchHHHHHHHHHhh---hcCceEEEecCHHHHHHHHHHC------------CCceEEeccccchhhHhhcC
Confidence 345789998876 223343332 3478999999999998777655 247899999998 3433 3
Q ss_pred CCcccEEEE
Q 038076 214 SGRYAGIVV 222 (345)
Q Consensus 214 ~~~yD~Ii~ 222 (345)
-+.+|+++.
T Consensus 298 i~~~D~~ia 306 (461)
T 4g65_A 298 IDQVDVFIA 306 (461)
T ss_dssp GGGCSEEEE
T ss_pred chhhcEEEE
Confidence 478999886
No 486
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=77.53 E-value=2.5 Score=39.23 Aligned_cols=93 Identities=10% Similarity=0.058 Sum_probs=54.6
Q ss_pred CCCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 140 PNGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 140 ~p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
..++|.+||+| |..+++.+.. + +.+|.++|.++.- +.+.+. + ++. .|..+.+ +..
T Consensus 141 ~g~~vgIiG~G~IG~~~A~~l~~-~-G~~V~~~d~~~~~-~~~~~~-g-------------~~~--~~l~ell----~~a 197 (307)
T 1wwk_A 141 EGKTIGIIGFGRIGYQVAKIANA-L-GMNILLYDPYPNE-ERAKEV-N-------------GKF--VDLETLL----KES 197 (307)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-T-TCEEEEECSSCCH-HHHHHT-T-------------CEE--CCHHHHH----HHC
T ss_pred CCceEEEEccCHHHHHHHHHHHH-C-CCEEEEECCCCCh-hhHhhc-C-------------ccc--cCHHHHH----hhC
Confidence 45789999988 4556655554 3 5899999998865 334332 2 111 1332332 468
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
|+|++-+..... ..++...+.+ +.|+||++ ++|+....
T Consensus 198 DvV~l~~p~~~~-t~~li~~~~l----~~mk~ga~-lin~arg~ 235 (307)
T 1wwk_A 198 DVVTIHVPLVES-TYHLINEERL----KLMKKTAI-LINTSRGP 235 (307)
T ss_dssp SEEEECCCCSTT-TTTCBCHHHH----HHSCTTCE-EEECSCGG
T ss_pred CEEEEecCCChH-HhhhcCHHHH----hcCCCCeE-EEECCCCc
Confidence 999986654321 2334444443 45777665 46887644
No 487
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=77.50 E-value=2.6 Score=39.51 Aligned_cols=93 Identities=12% Similarity=0.070 Sum_probs=54.1
Q ss_pred CCCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 140 PNGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 140 ~p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
..++|.+||+| |..+++.+.. + +.+|.++|.++.- +.++++ + ++. .|..+.+ +..
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~-~-G~~V~~~d~~~~~-~~~~~~-g-------------~~~--~~l~~~l----~~a 205 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKG-F-NMRILYYSRTRKE-EVEREL-N-------------AEF--KPLEDLL----RES 205 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-T-TCEEEEECSSCCH-HHHHHH-C-------------CEE--CCHHHHH----HHC
T ss_pred CCCEEEEEccCHHHHHHHHHHHh-C-CCEEEEECCCcch-hhHhhc-C-------------ccc--CCHHHHH----hhC
Confidence 35689999987 4445555543 3 5799999999876 544432 2 111 2322222 467
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
|+|++-+..... ..++... .....|+|+.++ +|+....
T Consensus 206 DvVil~vp~~~~-t~~~i~~----~~~~~mk~~ail-In~srg~ 243 (334)
T 2dbq_A 206 DFVVLAVPLTRE-TYHLINE----ERLKLMKKTAIL-INIARGK 243 (334)
T ss_dssp SEEEECCCCCTT-TTTCBCH----HHHHHSCTTCEE-EECSCGG
T ss_pred CEEEECCCCChH-HHHhhCH----HHHhcCCCCcEE-EECCCCc
Confidence 999986654321 1233333 344567887766 7887544
No 488
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=77.31 E-value=3 Score=39.27 Aligned_cols=94 Identities=20% Similarity=0.114 Sum_probs=54.3
Q ss_pred CCCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 140 PNGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 140 ~p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
..++|.+||+| |+.+++.+.. + +.+|.++|.++.- +.+++ .+ ++. .+..+.+ +..
T Consensus 164 ~g~tvgIIGlG~IG~~vA~~l~~-~-G~~V~~~d~~~~~-~~~~~-~g-------------~~~--~~l~ell----~~a 220 (335)
T 2g76_A 164 NGKTLGILGLGRIGREVATRMQS-F-GMKTIGYDPIISP-EVSAS-FG-------------VQQ--LPLEEIW----PLC 220 (335)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHT-T-TCEEEEECSSSCH-HHHHH-TT-------------CEE--CCHHHHG----GGC
T ss_pred CcCEEEEEeECHHHHHHHHHHHH-C-CCEEEEECCCcch-hhhhh-cC-------------cee--CCHHHHH----hcC
Confidence 45789999988 4555555543 3 5899999987654 22332 22 111 1332332 468
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
|+|++-++.... ..++... ...+.|+||++ ++|+.....
T Consensus 221 DvV~l~~P~t~~-t~~li~~----~~l~~mk~gai-lIN~arg~v 259 (335)
T 2g76_A 221 DFITVHTPLLPS-TTGLLND----NTFAQCKKGVR-VVNCARGGI 259 (335)
T ss_dssp SEEEECCCCCTT-TTTSBCH----HHHTTSCTTEE-EEECSCTTS
T ss_pred CEEEEecCCCHH-HHHhhCH----HHHhhCCCCcE-EEECCCccc
Confidence 999986655322 1234443 34466787665 568887543
No 489
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=77.13 E-value=4.2 Score=36.74 Aligned_cols=92 Identities=15% Similarity=0.096 Sum_probs=54.4
Q ss_pred CCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 141 NGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 141 p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
..+|.+||+| |..++..+.+. +.+|+++|.+++-.+...+. + +++ ..|..+.+ +..|
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~-g-------------~~~-~~~~~~~~----~~~D 62 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKE--GVTVYAFDLMEANVAAVVAQ-G-------------AQA-CENNQKVA----AASD 62 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHTT-T-------------CEE-CSSHHHHH----HHCS
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHC-C-------------Cee-cCCHHHHH----hCCC
Confidence 4589999998 45566666653 46899999999877755442 1 111 12222222 3589
Q ss_pred EEEEcCCCCCCCCCCcchHHHHH---HHHhccCCCcEEEEEecCC
Q 038076 219 GIVVDLFSEGKVLPQLEEVATWL---KLKDRLMPNGRFMVNCGGI 260 (345)
Q Consensus 219 ~Ii~D~f~~~~~p~~l~t~ef~~---~~~~~L~pgGvlvvn~~~~ 260 (345)
+|++-+.. .....+.+. .+...|+++-+ ++++.+.
T Consensus 63 ~vi~~vp~------~~~~~~v~~~~~~l~~~l~~~~~-vv~~~~~ 100 (301)
T 3cky_A 63 IIFTSLPN------AGIVETVMNGPGGVLSACKAGTV-IVDMSSV 100 (301)
T ss_dssp EEEECCSS------HHHHHHHHHSTTCHHHHSCTTCE-EEECCCC
T ss_pred EEEEECCC------HHHHHHHHcCcchHhhcCCCCCE-EEECCCC
Confidence 99984422 222344553 56667877665 4565543
No 490
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=77.07 E-value=18 Score=33.41 Aligned_cols=101 Identities=15% Similarity=0.156 Sum_probs=53.0
Q ss_pred CEEEEeec-cc-HHHHHHHHhCCCCEEEEEECCHHHHHH-HHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 143 PIAIYGLG-GG-TAAHLMLDLWPSLKLEGWEIDEILIDK-VRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 143 ~VLiIG~G-~G-~~~~~l~~~~p~~~v~~VEidp~vi~~-A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
+|.+||+| .| +++..+.......++..+|++++.++- +.+.-.... + ..++++..+| .+ .-+.-|+
T Consensus 2 KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~-----~-~~~~~v~~~~-~~----a~~~aD~ 70 (310)
T 2xxj_A 2 KVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATP-----F-AHPVWVWAGS-YG----DLEGARA 70 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGG-----G-SCCCEEEECC-GG----GGTTEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHh-----h-cCCeEEEECC-HH----HhCCCCE
Confidence 68999986 22 333333333334689999999976663 443322111 0 1345555544 22 1357899
Q ss_pred EEEcCCCCCCCCCC------cchHHHHHHHHhc---cCCCcEEEE
Q 038076 220 IVVDLFSEGKVLPQ------LEEVATWLKLKDR---LMPNGRFMV 255 (345)
Q Consensus 220 Ii~D~f~~~~~p~~------l~t~ef~~~~~~~---L~pgGvlvv 255 (345)
|++-+..+.. |.. ..+...++.+.+. .+|+|++++
T Consensus 71 Vii~ag~~~~-~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv 114 (310)
T 2xxj_A 71 VVLAAGVAQR-PGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLV 114 (310)
T ss_dssp EEECCCCCCC-TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred EEECCCCCCC-CCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEE
Confidence 9986533221 111 1223333333322 389998765
No 491
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=77.04 E-value=14 Score=33.98 Aligned_cols=37 Identities=22% Similarity=0.227 Sum_probs=25.4
Q ss_pred CEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHH
Q 038076 143 PIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDK 179 (345)
Q Consensus 143 ~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~ 179 (345)
+|.+||+| |..++..+....-+.+|+.+|+|++.++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~ 40 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQG 40 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHH
Confidence 68899987 33444444443125789999999987663
No 492
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=76.68 E-value=2.5 Score=40.82 Aligned_cols=45 Identities=24% Similarity=0.221 Sum_probs=36.2
Q ss_pred CCCEEEEeecccHHHHHHHHh---C----CCCEEEEEECCHHHHHHHHHhcC
Q 038076 141 NGPIAIYGLGGGTAAHLMLDL---W----PSLKLEGWEIDEILIDKVRDYFG 185 (345)
Q Consensus 141 p~~VLiIG~G~G~~~~~l~~~---~----p~~~v~~VEidp~vi~~A~~~f~ 185 (345)
+-+|+++|.|.|+++.-+++. . ...++..||++|...+.=++.+.
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 132 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA 132 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc
Confidence 446999999999999888764 2 23589999999999997777663
No 493
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=76.68 E-value=21 Score=32.57 Aligned_cols=75 Identities=17% Similarity=0.107 Sum_probs=42.3
Q ss_pred CCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcC-CCCCCCCCCCCCcEEEEEcccccccccCCCccc
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFG-LSDLEKPTATGGVLQVHIGDVFSPSEDASGRYA 218 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~-~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD 218 (345)
.+|.+||+| |..++..+.+..-..+|+.+|++++.++.....+. ... ....++++...|. +- -+..|
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~d~-~~----~~~aD 71 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMA-----NLEAHGNIVINDW-AA----LADAD 71 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG-----GSSSCCEEEESCG-GG----GTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhh-----hcCCCeEEEeCCH-HH----hCCCC
Confidence 479999987 44555555554212589999999987754332111 000 0012345544553 32 25689
Q ss_pred EEEEcCCC
Q 038076 219 GIVVDLFS 226 (345)
Q Consensus 219 ~Ii~D~f~ 226 (345)
+||+-+..
T Consensus 72 vViiav~~ 79 (309)
T 1hyh_A 72 VVISTLGN 79 (309)
T ss_dssp EEEECCSC
T ss_pred EEEEecCC
Confidence 99986543
No 494
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=76.59 E-value=11 Score=33.26 Aligned_cols=75 Identities=13% Similarity=0.046 Sum_probs=50.1
Q ss_pred CCCEEEEeeccc---HHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccccc------c
Q 038076 141 NGPIAIYGLGGG---TAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPS------E 211 (345)
Q Consensus 141 p~~VLiIG~G~G---~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l------~ 211 (345)
.+.+|+.|+++| .+++.+.+ .+.+|.+++.+++-.+.+.+.+.. ...++.++..|..+.- +
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~v~~~~~ 75 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAK--EGARVVITGRTKEKLEEAKLEIEQ--------FPGQILTVQMDVRNTDDIQKMIE 75 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHCC--------STTCEEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHh--------cCCcEEEEEccCCCHHHHHHHHH
Confidence 567888887655 23444444 368999999999887776665532 1457899999987631 1
Q ss_pred c---CCCcccEEEEcCC
Q 038076 212 D---ASGRYAGIVVDLF 225 (345)
Q Consensus 212 ~---~~~~yD~Ii~D~f 225 (345)
. .-++.|++|..+-
T Consensus 76 ~~~~~~g~id~lv~nAg 92 (257)
T 3imf_A 76 QIDEKFGRIDILINNAA 92 (257)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHHcCCCCEEEECCC
Confidence 1 1247899998653
No 495
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=76.52 E-value=1.8 Score=40.48 Aligned_cols=94 Identities=14% Similarity=0.125 Sum_probs=52.2
Q ss_pred CCCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 140 PNGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 140 ~p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
..++|.+||+| |..+++.+.. + +.+|.++|.++.-.+.+.++ + ++.. |..+.+ +..
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~-~-G~~V~~~d~~~~~~~~~~~~-g-------------~~~~--~l~e~l----~~a 211 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKP-F-GVQRFLYTGRQPRPEEAAEF-Q-------------AEFV--STPELA----AQS 211 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGG-G-TCCEEEEESSSCCHHHHHTT-T-------------CEEC--CHHHHH----HHC
T ss_pred CCCEEEEECcCHHHHHHHHHHHH-C-CCEEEEECCCCcchhHHHhc-C-------------ceeC--CHHHHH----hhC
Confidence 35689999987 3344444433 2 46899999887544433321 1 2221 332332 367
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
|+|++-+..... ..++...+ ..+.|++|.++ +|+....
T Consensus 212 DvVi~~vp~~~~-t~~~i~~~----~~~~mk~gail-In~srg~ 249 (330)
T 2gcg_A 212 DFIVVACSLTPA-TEGLCNKD----FFQKMKETAVF-INISRGD 249 (330)
T ss_dssp SEEEECCCCCTT-TTTCBSHH----HHHHSCTTCEE-EECSCGG
T ss_pred CEEEEeCCCChH-HHHhhCHH----HHhcCCCCcEE-EECCCCc
Confidence 999986644321 12333333 34567877665 6887654
No 496
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=76.21 E-value=16 Score=32.73 Aligned_cols=75 Identities=19% Similarity=0.159 Sum_probs=49.6
Q ss_pred CCCEEEEeecccH---HHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccc------
Q 038076 141 NGPIAIYGLGGGT---AAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSE------ 211 (345)
Q Consensus 141 p~~VLiIG~G~G~---~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~------ 211 (345)
.+.+|+.|+++|. +++.+++ .+.+|.+++.+++-.+...+.+... ..++.++..|..+.-.
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~l~~~--------~~~~~~~~~Dv~d~~~v~~~~~ 97 (283)
T 3v8b_A 28 SPVALITGAGSGIGRATALALAA--DGVTVGALGRTRTEVEEVADEIVGA--------GGQAIALEADVSDELQMRNAVR 97 (283)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHHTTT--------TCCEEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhc--------CCcEEEEEccCCCHHHHHHHHH
Confidence 5678888876552 3334443 3689999999998777665554321 4678899999876411
Q ss_pred c---CCCcccEEEEcCC
Q 038076 212 D---ASGRYAGIVVDLF 225 (345)
Q Consensus 212 ~---~~~~yD~Ii~D~f 225 (345)
. .-++.|++|..+-
T Consensus 98 ~~~~~~g~iD~lVnnAg 114 (283)
T 3v8b_A 98 DLVLKFGHLDIVVANAG 114 (283)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHHhCCCCEEEECCC
Confidence 1 1247999998653
No 497
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=76.06 E-value=6.9 Score=34.49 Aligned_cols=41 Identities=10% Similarity=0.101 Sum_probs=30.8
Q ss_pred CEEEEeec--ccHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHhcC
Q 038076 143 PIAIYGLG--GGTAAHLMLDLWPS-LKLEGWEIDEILIDKVRDYFG 185 (345)
Q Consensus 143 ~VLiIG~G--~G~~~~~l~~~~p~-~~v~~VEidp~vi~~A~~~f~ 185 (345)
+|.+||+| |+.++..+.+. + .+|+++|.+++-.+...+.++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~r~~~~~~~~~~~~g 45 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQ--GGYRIYIANRGAEKRERLEKELG 45 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHH--CSCEEEEECSSHHHHHHHHHHTC
T ss_pred EEEEECchHHHHHHHHHHHHC--CCCeEEEECCCHHHHHHHHHhcC
Confidence 68899998 55666666654 4 689999999998877666443
No 498
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=75.98 E-value=2.2 Score=40.39 Aligned_cols=97 Identities=15% Similarity=0.097 Sum_probs=54.5
Q ss_pred CCCCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcc
Q 038076 140 PNGPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRY 217 (345)
Q Consensus 140 ~p~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~y 217 (345)
..++|.+||+| |..+++.+...+ +.+|.++|.++.-.+.+.+. + ++.. .|..+.+ +..
T Consensus 162 ~g~~vgIIG~G~IG~~vA~~l~~~~-G~~V~~~d~~~~~~~~~~~~-g-------------~~~~-~~l~ell----~~a 221 (348)
T 2w2k_A 162 RGHVLGAVGLGAIQKEIARKAVHGL-GMKLVYYDVAPADAETEKAL-G-------------AERV-DSLEELA----RRS 221 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT-CCEEEEECSSCCCHHHHHHH-T-------------CEEC-SSHHHHH----HHC
T ss_pred CCCEEEEEEECHHHHHHHHHHHHhc-CCEEEEECCCCcchhhHhhc-C-------------cEEe-CCHHHHh----ccC
Confidence 45789999987 445555554122 57999999987655444332 1 1111 2322322 367
Q ss_pred cEEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCCC
Q 038076 218 AGIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGIDG 262 (345)
Q Consensus 218 D~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~~ 262 (345)
|+|++-+..... ..++...+. .+.|+||.++ +|+.....
T Consensus 222 DvVil~vp~~~~-t~~li~~~~----l~~mk~gail-in~srg~~ 260 (348)
T 2w2k_A 222 DCVSVSVPYMKL-THHLIDEAF----FAAMKPGSRI-VNTARGPV 260 (348)
T ss_dssp SEEEECCCCSGG-GTTCBCHHH----HHHSCTTEEE-EECSCGGG
T ss_pred CEEEEeCCCChH-HHHHhhHHH----HhcCCCCCEE-EECCCCch
Confidence 999986544211 123343333 3467777665 68876543
No 499
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=75.73 E-value=9.2 Score=35.02 Aligned_cols=96 Identities=13% Similarity=0.053 Sum_probs=52.4
Q ss_pred CCEEEEeec--ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEcccccccccCCCcccE
Q 038076 142 GPIAIYGLG--GGTAAHLMLDLWPSLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFSPSEDASGRYAG 219 (345)
Q Consensus 142 ~~VLiIG~G--~G~~~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~~l~~~~~~yD~ 219 (345)
.+|++||+| |+.++..|. .+.+|+.++.+++-.+..++. ++.- ..+..+.. +....-....+.+|+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~---~g~~V~~~~r~~~~~~~l~~~-G~~~------~~~~~~~~--~~~~~~~~~~~~~D~ 70 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS---LYHDVTVVTRRQEQAAAIQSE-GIRL------YKGGEEFR--ADCSADTSINSDFDL 70 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH---TTSEEEEECSCHHHHHHHHHH-CEEE------EETTEEEE--ECCEEESSCCSCCSE
T ss_pred CEEEEECCCHHHHHHHHHHh---cCCceEEEECCHHHHHHHHhC-CceE------ecCCCeec--ccccccccccCCCCE
Confidence 579999998 455555554 357999999999876655543 3210 00111111 111111123467999
Q ss_pred EEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecC
Q 038076 220 IVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGG 259 (345)
Q Consensus 220 Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~ 259 (345)
||+-.-. ....+.++.++. +. ++. ++.+.+
T Consensus 71 vilavK~-------~~~~~~l~~l~~-~~-~~~-ivs~~n 100 (307)
T 3ego_A 71 LVVTVKQ-------HQLQSVFSSLER-IG-KTN-ILFLQN 100 (307)
T ss_dssp EEECCCG-------GGHHHHHHHTTS-SC-CCE-EEECCS
T ss_pred EEEEeCH-------HHHHHHHHHhhc-CC-CCe-EEEecC
Confidence 9984321 234566776665 33 444 555543
No 500
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=75.72 E-value=9.9 Score=35.24 Aligned_cols=113 Identities=8% Similarity=0.017 Sum_probs=69.6
Q ss_pred CCCCEEEEeecccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhcCCCCCCCCCCCCCcEEEEEccccc-cccc-CCCc
Q 038076 140 PNGPIAIYGLGGGTAAHLMLDLWP-SLKLEGWEIDEILIDKVRDYFGLSDLEKPTATGGVLQVHIGDVFS-PSED-ASGR 216 (345)
Q Consensus 140 ~p~~VLiIG~G~G~~~~~l~~~~p-~~~v~~VEidp~vi~~A~~~f~~~~~~~~~~~~~rv~v~~gDa~~-~l~~-~~~~ 216 (345)
.++.|++||||-=+.+..+. .| +.++.-|| .|+|++..++.+.-.+ ....++.+++..|.++ +++. ....
T Consensus 102 g~~QvV~LGaGlDTra~Rl~--~~~~~~v~evD-~P~vi~~k~~lL~~~~----~~~~~~~~~v~~Dl~d~~~~~l~~~g 174 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLD--WPTGTTVYEID-QPKVLAYKSTTLAEHG----VTPTADRREVPIDLRQDWPPALRSAG 174 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSC--CCTTCEEEEEE-CHHHHHHHHHHHHHTT----CCCSSEEEEEECCTTSCHHHHHHHTT
T ss_pred CCCeEEEeCCCCCchhhhcc--CCCCcEEEEcC-CHHHHHHHHHHHHhcC----CCCCCCeEEEecchHhhHHHHHHhcc
Confidence 35679999998666644432 24 46777788 5999999888773110 0125688999999886 2221 1112
Q ss_pred cc-----EEEEcCCCCCCCCCCcchHHHHHHHHhccCCCcEEEEEecCCC
Q 038076 217 YA-----GIVVDLFSEGKVLPQLEEVATWLKLKDRLMPNGRFMVNCGGID 261 (345)
Q Consensus 217 yD-----~Ii~D~f~~~~~p~~l~t~ef~~~~~~~L~pgGvlvvn~~~~~ 261 (345)
|| ++++-.-. .++++. ...++++.+.+.+.||+.+++.....+
T Consensus 175 ~d~~~Pt~~i~Egvl-~Yl~~~-~~~~ll~~l~~~~~~gs~l~~d~~~~~ 222 (310)
T 2uyo_A 175 FDPSARTAWLAEGLL-MYLPAT-AQDGLFTEIGGLSAVGSRIAVETSPLH 222 (310)
T ss_dssp CCTTSCEEEEECSCG-GGSCHH-HHHHHHHHHHHTCCTTCEEEEECCCTT
T ss_pred CCCCCCEEEEEechH-hhCCHH-HHHHHHHHHHHhCCCCeEEEEEecCCC
Confidence 22 33332111 122222 345678888888899999999887654
Done!