Query 038078
Match_columns 165
No_of_seqs 85 out of 87
Neff 4.3
Searched_HMMs 13730
Date Mon Mar 25 12:18:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038078.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/038078hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ezia_ a.4.1.2 (A:) Transposa 69.5 2.1 0.00015 27.5 3.4 35 94-128 8-42 (75)
2 d1s9ua_ a.184.1.1 (A:) Putativ 29.7 41 0.003 24.2 5.2 23 132-154 174-196 (207)
3 d1qqga1 b.55.1.2 (A:12-114) In 21.9 23 0.0017 21.7 2.1 15 139-153 88-102 (103)
4 d1zavu1 a.108.1.1 (U:1-30) Rib 21.2 59 0.0043 17.4 3.4 11 95-105 3-13 (30)
5 d1nq6a_ c.1.8.3 (A:) Xylanase 20.5 27 0.002 26.1 2.6 25 59-84 70-94 (302)
6 d1x1ga1 b.55.1.1 (A:8-123) Ple 19.4 27 0.002 21.3 2.1 16 138-153 100-115 (116)
7 d1bhua_ b.11.1.3 (A:) Streptom 18.3 15 0.0011 24.7 0.5 30 8-38 4-33 (102)
8 d2c0ga2 c.47.1.7 (A:1024-1145) 17.1 5.6 0.00041 26.4 -2.0 35 56-91 14-48 (122)
9 d1n1ba1 a.102.4.1 (A:64-270) ( 16.7 1.2E+02 0.0087 22.4 5.6 50 100-155 5-55 (207)
10 d2gkpa1 d.351.1.1 (A:1-164) Hy 16.2 65 0.0047 23.6 3.8 41 107-152 42-94 (164)
No 1
>d2ezia_ a.4.1.2 (A:) Transposase {Bacteriophage mu [TaxId: 10677]}
Probab=69.51 E-value=2.1 Score=27.49 Aligned_cols=35 Identities=29% Similarity=0.452 Sum_probs=30.7
Q ss_pred hhhchHHHhhhcCCCCCCCcHHHHHHHHHHHHHHH
Q 038078 94 WQEDIIPFFQAVTLPKECTTVQECYIELSKQVKEK 128 (165)
Q Consensus 94 l~e~i~~~~~~~~l~~~a~t~~~cy~ela~~vk~~ 128 (165)
..|++|.+|++.=|.....|...||.++...-+++
T Consensus 8 ~~~~~we~i~~~YL~~~~ps~~~~y~~i~~~c~~~ 42 (75)
T d2ezia_ 8 FDEDAWQFLIADYLRPEKPAFRKCYERLELAAREH 42 (75)
T ss_dssp SCHHHHHHHHHHHTSTTCCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCccCCCHHHHHHHHHHHHHHc
Confidence 47899999999878999999999999999887653
No 2
>d1s9ua_ a.184.1.1 (A:) Putative component of anaerobic dehydrogenases YnfI {Salmonella typhimurium [TaxId: 90371]}
Probab=29.72 E-value=41 Score=24.25 Aligned_cols=23 Identities=13% Similarity=0.367 Sum_probs=19.2
Q ss_pred CchHHHHHHHHHHHHHHHHHhhC
Q 038078 132 VDPYFDKLADAMVTWIEAWDELN 154 (165)
Q Consensus 132 ~~~~f~~~a~~M~~Wi~a~~~l~ 154 (165)
..+|+..+|..+..|++.+++-=
T Consensus 174 ~~~fY~~la~ll~~fL~~~~~~l 196 (207)
T d1s9ua_ 174 GHPFYQALGQLARLTLAQWQAQL 196 (207)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCchHHHHHHHHHHHHHHHHHHc
Confidence 36899999999999999887543
No 3
>d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.89 E-value=23 Score=21.67 Aligned_cols=15 Identities=20% Similarity=0.308 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHhh
Q 038078 139 LADAMVTWIEAWDEL 153 (165)
Q Consensus 139 ~a~~M~~Wi~a~~~l 153 (165)
..+-|+.|++++++|
T Consensus 88 s~~e~~~Wi~al~~l 102 (103)
T d1qqga1 88 SEAEQDSWYQALLQL 102 (103)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhh
Confidence 468899999999987
No 4
>d1zavu1 a.108.1.1 (U:1-30) Ribosomal protein L7/12, oligomerisation (N-terminal) domain {Thermotoga maritima [TaxId: 2336]}
Probab=21.22 E-value=59 Score=17.44 Aligned_cols=11 Identities=18% Similarity=0.389 Sum_probs=8.1
Q ss_pred hhchHHHhhhc
Q 038078 95 QEDIIPFFQAV 105 (165)
Q Consensus 95 ~e~i~~~~~~~ 105 (165)
.|+|+.-++.+
T Consensus 3 ~eeiv~aiekl 13 (30)
T d1zavu1 3 IDEIIEAIEKL 13 (30)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHHh
Confidence 36788888876
No 5
>d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]}
Probab=20.50 E-value=27 Score=26.14 Aligned_cols=25 Identities=16% Similarity=0.286 Sum_probs=17.6
Q ss_pred HHHhcCcceeccceEeecCCCCcccc
Q 038078 59 CDHLNLGVKTGLPYIFHSKASNPFVN 84 (165)
Q Consensus 59 ~d~lG~~Vk~G~P~v~h~ka~n~~~d 84 (165)
|..-|..|+ |.|++||+..++....
T Consensus 70 a~~~gi~v~-gh~l~w~~~~p~w~~~ 94 (302)
T d1nq6a_ 70 AQSKGMKVR-GHTLVWHSQLPGWVSP 94 (302)
T ss_dssp HHHHTCEEE-EEEEEESTTCCTTTTT
T ss_pred HHHCCCEEE-eecccccccccccccc
Confidence 555677775 6799999887664433
No 6
>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.39 E-value=27 Score=21.31 Aligned_cols=16 Identities=31% Similarity=0.495 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHhh
Q 038078 138 KLADAMVTWIEAWDEL 153 (165)
Q Consensus 138 ~~a~~M~~Wi~a~~~l 153 (165)
..-+-+..|+++++++
T Consensus 100 ~s~ee~~~Wi~ai~~~ 115 (116)
T d1x1ga1 100 SSKAERAEWIEAIKKL 115 (116)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhh
Confidence 3478899999999986
No 7
>d1bhua_ b.11.1.3 (A:) Streptomyces metalloproteinase inhibitor, SMPI {Streptomyces nigrescens [TaxId: 1920]}
Probab=18.32 E-value=15 Score=24.73 Aligned_cols=30 Identities=33% Similarity=0.490 Sum_probs=24.6
Q ss_pred ccCCceecccCcchhhhhhhhchhhhhcccC
Q 038078 8 IPKGTLFPMCGMNLAFDRHLIGPAMYFGLMG 38 (165)
Q Consensus 8 ~p~gt~~Pv~s~NlAf~ReligPA~y~~~mg 38 (165)
-|.|++|+.+|..+.=-|.+| ||-=.-..|
T Consensus 4 cpagslctysgtglsgartvi-pasdmekag 33 (102)
T d1bhua_ 4 CPAGSLCTYSGTGLSGARTVI-PASDMEKAG 33 (102)
T ss_dssp SCSSSBCCBBSSSSCBSCCCB-SSSTHHHHS
T ss_pred CCCCcceeeccCCcccceeee-chhHhhhcc
Confidence 589999999999999999999 885443333
No 8
>d2c0ga2 c.47.1.7 (A:1024-1145) Windbeutel, N-terminal domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=17.15 E-value=5.6 Score=26.38 Aligned_cols=35 Identities=17% Similarity=0.140 Sum_probs=24.1
Q ss_pred HHHHHHhcCcceeccceEeecCCCCcccchhhhhhh
Q 038078 56 KVICDHLNLGVKTGLPYIFHSKASNPFVNLKKEYKG 91 (165)
Q Consensus 56 k~i~d~lG~~Vk~G~P~v~h~ka~n~~~dL~~E~~G 91 (165)
+.|.++--.=|.|..|+|.|.| +..|..|.+++..
T Consensus 14 ~~v~~~~~~lV~Fya~wC~~ck-~p~f~kla~~~~~ 48 (122)
T d2c0ga2 14 KTVERFPYSVVKFDIASPYGEK-HEAFTAFSKSAHK 48 (122)
T ss_dssp HHHTTSSEEEEEEEESSCCSHH-HHHHHHHHHHHHH
T ss_pred HHHhcCCcEEEEEECCCCCccc-CHHHHHHHHHHHH
Confidence 4444444344889999999998 4677777776644
No 9
>d1n1ba1 a.102.4.1 (A:64-270) (+)-bornyl diphosphate synthase {Garden sage (Salvia officinalis) [TaxId: 38868]}
Probab=16.65 E-value=1.2e+02 Score=22.41 Aligned_cols=50 Identities=20% Similarity=0.234 Sum_probs=26.4
Q ss_pred HHhhhcCCCCCCCcHHHHHHHHHHHHHHHhccC-chHHHHHHHHHHHHHHHHHhhCc
Q 038078 100 PFFQAVTLPKECTTVQECYIELSKQVKEKLSKV-DPYFDKLADAMVTWIEAWDELNP 155 (165)
Q Consensus 100 ~~~~~~~l~~~a~t~~~cy~ela~~vk~~l~~~-~~~f~~~a~~M~~Wi~a~~~l~~ 155 (165)
.|+|++..+-..+++.+-..+|-+.||.-+... ++ +.+ ..=|+.+++||=
T Consensus 5 ~fl~sl~~~~~~e~~~~r~e~Lkeevr~ml~~~~d~-~~~-----L~lID~lqRLGi 55 (207)
T d1n1ba1 5 NYIQSLNTPYTEERHLDRKAELIVQVRILLKEKMEP-VQQ-----LELIHDLKYLGL 55 (207)
T ss_dssp HHHHHCCCSTTSHHHHHHHHHHHHHHHHHHHSCCCH-HHH-----HHHHHHHHHTTC
T ss_pred hHHHhCCCCcccHHHHHHHHHHHHHHHHHHHhccCH-HHH-----HHHHHHHHHcCc
Confidence 477887555555554444444544554444322 32 222 234777777773
No 10
>d2gkpa1 d.351.1.1 (A:1-164) Hypothetical protein NMB0488 {Neisseria meningitidis [TaxId: 487]}
Probab=16.25 E-value=65 Score=23.59 Aligned_cols=41 Identities=20% Similarity=0.391 Sum_probs=31.8
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHhccCc----------hHHHH--HHHHHHHHHHHHHh
Q 038078 107 LPKECTTVQECYIELSKQVKEKLSKVD----------PYFDK--LADAMVTWIEAWDE 152 (165)
Q Consensus 107 l~~~a~t~~~cy~ela~~vk~~l~~~~----------~~f~~--~a~~M~~Wi~a~~~ 152 (165)
||++.+ ..+|.+.++++|...+ .||+. ..+.-.+|++.+..
T Consensus 42 L~pdv~-----d~~lG~~i~~aLs~SRti~~d~~E~~dffd~~~~~e~y~~Wv~~lm~ 94 (164)
T d2gkpa1 42 LPLDTD-----NETLGTTVLQALANSRTFVYDSPEDQDFFDTEKIRQRYEDWVAKLCG 94 (164)
T ss_dssp ECTTCC-----HHHHHHHHHHHHHTCCBCCTTSHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCC-----hHHHHHHHHHHHHhCccccCCchHHHHhhcchhhHHHHHHHHHHHHH
Confidence 566665 4899999999998662 58855 48889999988744
Done!