Query 038082
Match_columns 149
No_of_seqs 214 out of 1103
Neff 5.1
Searched_HMMs 13730
Date Mon Mar 25 12:22:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038082.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/038082hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2b3tb1 e.38.1.1 (B:7-354) Pep 100.0 4E-39 2.9E-43 273.9 7.6 117 16-141 209-344 (344)
2 d1rq0a_ e.38.1.1 (A:) Peptide 100.0 9.5E-39 6.9E-43 270.8 7.3 116 16-140 195-329 (333)
3 d1gqea_ e.38.1.1 (A:) Polypept 100.0 4.6E-35 3.4E-39 250.1 10.1 107 16-132 233-358 (362)
4 d1j26a_ d.50.4.1 (A:) Ict1 pro 99.9 1.6E-24 1.2E-28 158.5 9.2 68 8-79 15-107 (112)
5 d2ctfa1 d.51.1.1 (A:7-96) Vigi 64.3 3.7 0.00027 26.1 3.9 48 28-78 37-87 (90)
6 d2ctea1 d.51.1.1 (A:8-88) Vigi 60.8 1.6 0.00011 27.3 1.4 48 28-78 26-78 (81)
7 d2ctka1 d.51.1.1 (A:8-98) Vigi 59.1 2.9 0.00021 26.5 2.5 49 28-79 26-79 (91)
8 d2ctma1 d.51.1.1 (A:8-88) Vigi 53.7 4.5 0.00033 25.0 2.8 49 28-79 26-80 (81)
9 d2ba0a3 d.51.1.1 (A:136-219) E 49.5 2.8 0.00021 26.7 1.2 44 27-75 16-62 (84)
10 d1umqa_ a.4.1.12 (A:) Photosyn 49.3 2.1 0.00016 25.6 0.5 17 133-149 36-52 (60)
11 d2ctla1 d.51.1.1 (A:8-91) Vigi 44.4 8.1 0.00059 23.8 2.9 48 27-77 25-80 (84)
12 d1bl0a1 a.4.1.8 (A:9-62) MarA 43.3 2.1 0.00015 24.4 -0.2 17 133-149 22-38 (54)
13 d2ctja1 d.51.1.1 (A:8-89) Vigi 39.9 12 0.00084 22.9 3.1 47 28-77 26-78 (82)
14 d2jn6a1 a.4.1.19 (A:1-89) Unch 37.6 6.8 0.00049 24.5 1.6 34 115-148 5-41 (89)
15 d1uw4a_ d.58.7.4 (A:) RNA proc 33.3 8.3 0.00061 25.0 1.5 13 39-51 2-14 (91)
16 d1ixca1 a.4.5.37 (A:1-89) LysR 33.1 6.7 0.00049 24.6 1.0 17 133-149 18-34 (89)
17 d1d5ya1 a.4.1.8 (A:3-56) Rob t 29.0 3.8 0.00027 23.3 -0.8 17 133-149 22-38 (54)
18 d2z0sa2 d.51.1.1 (A:148-234) E 28.5 13 0.00095 23.8 1.9 44 26-73 15-61 (87)
19 d1ijwc_ a.4.1.2 (C:) HIN recom 28.3 7.9 0.00058 22.1 0.7 17 133-149 24-40 (47)
20 d1tuaa1 d.51.1.1 (A:1-84) Hypo 28.1 14 0.001 23.3 2.0 47 28-74 19-69 (84)
21 d1b9ma1 a.4.5.8 (A:-1-126) N-t 27.6 9.3 0.00068 24.9 1.0 26 124-149 26-51 (127)
22 d2je6i3 d.51.1.1 (I:153-221) E 27.2 3.8 0.00028 25.0 -1.0 28 28-55 17-47 (69)
23 d2esna1 a.4.5.37 (A:3-91) Prob 26.2 14 0.001 22.9 1.6 26 124-149 14-39 (89)
24 d1g2ha_ a.4.1.12 (A:) Transcri 24.4 8.5 0.00062 22.8 0.3 17 133-149 36-52 (61)
25 d2axya1 d.51.1.1 (A:11-81) Pol 23.8 14 0.001 21.9 1.3 46 28-76 20-70 (71)
26 d1u3em2 d.285.1.1 (M:106-174) 23.6 10 0.00074 23.6 0.5 16 133-148 33-48 (69)
27 d2g7la1 a.4.1.9 (A:16-83) Puta 23.5 18 0.0013 21.1 1.7 17 133-149 27-43 (68)
28 d1z05a1 a.4.5.63 (A:10-80) Tra 22.8 11 0.00078 22.4 0.5 16 133-148 23-38 (71)
29 d1zk8a1 a.4.1.9 (A:6-77) Trans 22.0 20 0.0014 20.9 1.7 22 128-149 21-42 (72)
30 d2hyja1 a.4.1.9 (A:8-82) Putat 21.4 17 0.0013 21.4 1.4 17 133-149 28-44 (75)
31 d1viga_ d.51.1.1 (A:) Vigilin 21.3 18 0.0013 21.4 1.4 44 28-74 21-69 (71)
32 d2hsga1 a.35.1.5 (A:2-58) Gluc 21.3 9.3 0.00068 22.6 -0.0 17 133-149 4-20 (57)
33 d1pina2 d.26.1.1 (A:45-163) Mi 21.2 35 0.0025 22.0 3.0 16 31-46 1-16 (119)
34 d2fd5a1 a.4.1.9 (A:1-76) Proba 20.8 30 0.0022 20.1 2.4 17 133-149 30-46 (76)
35 d1r1ua_ a.4.5.5 (A:) Metal-sen 20.6 16 0.0012 23.1 1.1 16 133-148 34-49 (94)
36 d1j5ya1 a.4.5.1 (A:3-67) Putat 20.0 14 0.001 21.6 0.7 16 133-148 25-40 (65)
No 1
>d2b3tb1 e.38.1.1 (B:7-354) Peptide chain release factor 1, RF1 {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=4e-39 Score=273.87 Aligned_cols=117 Identities=26% Similarity=0.360 Sum_probs=95.5
Q ss_pred hccceEEEEeccCCCcCCCCccCceEEEEEcCCceEEEeccccCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCcccc
Q 038082 16 FRECEMDAYKSSGPGGQHRNKRESAVRLKHAPTGVIAQAAEDRSQHKNRASALSRLRTLLALKVRSSVNLDAYSPPPQLH 95 (149)
Q Consensus 16 ~~d~~i~~~RssGpGGQ~vNk~~s~V~l~h~ptGi~v~~~~~RSq~~Nr~~A~~~L~~~l~~~~~~~~~~~~~~~~~~~~ 95 (149)
++|++|+|+|||||||||||||+|||||+|+||||+|.||++|||++||+.||++|+++|.....++.+.+
T Consensus 209 ~~dl~i~~~rssg~GGQ~vnkt~sAVRi~H~ptGi~v~~q~eRSq~~Nk~~A~~~L~~kl~~~~~~~~~~~--------- 279 (344)
T d2b3tb1 209 PADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQA--------- 279 (344)
T ss_dssp SSSEEEEECCSSCCCTTTCCCSSEEEEEEETTTCCEEEEEESSCHHHHHHHHHHHHHHHHTTTTTTSCC-----------
T ss_pred cccceEEEecCCCccccchhhhhceeEEEEcCCceEEEccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 57779999999999999999999999999999999999999999999999999999998865444443321
Q ss_pred ccCCCCCccccCCCCCCCCCCC------------------hhhhhh-HHHhhchhhHHHHHHHhC
Q 038082 96 QILPPKSTIRSSEVGPQIGPNN------------------PKFALV-LPYSLLLPFVINAAKIYG 141 (149)
Q Consensus 96 ~~~~rksqir~~~r~~kIrtyn------------------~~f~~g-L~~llD~L~~~~aA~~L~ 141 (149)
....||+++++++||+|||||| ..||+| |+++++.+..+.++++|+
T Consensus 280 ~~~~r~~~~~~~~r~~~iRtY~~p~~~v~DhR~~~~~~~~~~vl~G~ld~~i~~~~~~~~~~~l~ 344 (344)
T d2b3tb1 280 EASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLA 344 (344)
T ss_dssp ----CCC-------CCEEEEEETTTTEEEEGGGTEEESCHHHHHHTCTHHHHHHHHHHHHHHHCC
T ss_pred HHHHHhcccccccccCceEeeecCCCccceeccCCeeCChhHhhCCChHHHHHHHHHHHHHHhcC
Confidence 2357899999999999999999 499999 999999999999999885
No 2
>d1rq0a_ e.38.1.1 (A:) Peptide chain release factor 1, RF1 {Thermotoga maritima [TaxId: 2336]}
Probab=100.00 E-value=9.5e-39 Score=270.79 Aligned_cols=116 Identities=28% Similarity=0.332 Sum_probs=89.5
Q ss_pred hccceEEEEeccCCCcCCCCccCceEEEEEcCCceEEEeccccCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCcccc
Q 038082 16 FRECEMDAYKSSGPGGQHRNKRESAVRLKHAPTGVIAQAAEDRSQHKNRASALSRLRTLLALKVRSSVNLDAYSPPPQLH 95 (149)
Q Consensus 16 ~~d~~i~~~RssGpGGQ~vNk~~s~V~l~h~ptGi~v~~~~~RSq~~Nr~~A~~~L~~~l~~~~~~~~~~~~~~~~~~~~ 95 (149)
++|++|+|+|||||||||||||+|||||+|+||||+|+||++|||++||+.||++|+++|.....++.+.+
T Consensus 195 ~~dl~i~~~RssG~GGQ~VNkt~sAVRitH~PTGi~v~~q~eRSQ~~Nk~~A~~~L~~kl~~~~~~~~~~~--------- 265 (333)
T d1rq0a_ 195 PEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQYQNKQTALRILRARLYQLQKEQKERE--------- 265 (333)
T ss_dssp GGGEEEEEECCCC----CCSSSSEEEEEEETTTCCEEEEEESSCHHHHHHHHHHHHHHHHHHHHHHHHHTT---------
T ss_pred ccceeEEeecCCccccchhhhhhheeEEEEcCCccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 66679999999999999999999999999999999999999999999999999999998876555554432
Q ss_pred ccCCCCCccccCCCCCCCCCCC------------------hhhhhh-HHHhhchhhHHHHHHHh
Q 038082 96 QILPPKSTIRSSEVGPQIGPNN------------------PKFALV-LPYSLLLPFVINAAKIY 140 (149)
Q Consensus 96 ~~~~rksqir~~~r~~kIrtyn------------------~~f~~g-L~~llD~L~~~~aA~~L 140 (149)
....||+|+++|+||++||||| ..||+| |+++|+.+....+++.|
T Consensus 266 ~~~~r~~~~~~~~r~~~iRtY~~p~~rV~DhR~~~~~~~l~~vl~G~ld~~i~~~~~~~~~~~l 329 (333)
T d1rq0a_ 266 ISQKRKSQIGTGERSEKIRTYNFPQNRVTDHRINYTSYRLQEILDGDLDEIISKLIEHDIENNL 329 (333)
T ss_dssp TCC----------CCCEEEEEETTTTEEEETTTTEEESCHHHHHTTCCHHHHHHHHHHHHTTTH
T ss_pred HHHHHhccccccccCCCceeeeCCCCcchhhccCCeecChhHHhCCChHHHHHHHHHHHHHHHH
Confidence 3457899999999999999999 499999 99999999977777665
No 3
>d1gqea_ e.38.1.1 (A:) Polypeptide chain release factor 2 (RF2) {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=4.6e-35 Score=250.12 Aligned_cols=107 Identities=34% Similarity=0.442 Sum_probs=86.8
Q ss_pred hccceEEEEeccCCCcCCCCccCceEEEEEcCCceEEEeccccCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCcccc
Q 038082 16 FRECEMDAYKSSGPGGQHRNKRESAVRLKHAPTGVIAQAAEDRSQHKNRASALSRLRTLLALKVRSSVNLDAYSPPPQLH 95 (149)
Q Consensus 16 ~~d~~i~~~RssGpGGQ~vNk~~s~V~l~h~ptGi~v~~~~~RSq~~Nr~~A~~~L~~~l~~~~~~~~~~~~~~~~~~~~ 95 (149)
++|++|+|+|||||||||||||+|||||||+||||+|+||++|||++||+.||++|+++|.....++.+.+..
T Consensus 233 ~~dl~i~~~rs~g~GGQ~vN~t~savri~H~ptgi~v~~q~ersq~~Nk~~A~~~L~~~l~~~~~~~~~~~~~------- 305 (362)
T d1gqea_ 233 PADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYEVEMQKKNAEKQ------- 305 (362)
T ss_dssp GGGEEEEEECCCCSSCCSTTSSCCEEEEEETTTCCEEEECSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-------
T ss_pred hHHeEEEEeecCCCCccchhhhhceeEEEecCchhHHHhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 5666999999999999999999999999999999999999999999999999999999876543333322111
Q ss_pred ccCCCCCccccCCCCCCCCCCCh------------------hhhhh-HHHhhchhh
Q 038082 96 QILPPKSTIRSSEVGPQIGPNNP------------------KFALV-LPYSLLLPF 132 (149)
Q Consensus 96 ~~~~rksqir~~~r~~kIrtyn~------------------~f~~g-L~~llD~L~ 132 (149)
....++.+++ ||+||||||| .||+| |+++|+++.
T Consensus 306 ~~~~~~~~~~---~g~~iRtY~~~~~rv~DhR~~~~~~~~~~vl~G~ld~~i~a~l 358 (362)
T d1gqea_ 306 AMEDNKSDIG---WGSQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASL 358 (362)
T ss_dssp CCSTTCCCCC---SCSEEEEEEGGGTEEEETTTCCEESCHHHHHTTCCHHHHHHHH
T ss_pred HHHhhhhcCc---CcCCccCccCCCCcccccccCCeeCChhHHhCCCHHHHHHHHH
Confidence 1223455554 6689999994 89999 999988875
No 4
>d1j26a_ d.50.4.1 (A:) Ict1 protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.90 E-value=1.6e-24 Score=158.49 Aligned_cols=68 Identities=29% Similarity=0.467 Sum_probs=59.8
Q ss_pred CCCChhhhhccceEEEEeccCCCcCCCCccCceEEEEE-------cC-----------------Cc-eEEEeccccCHHH
Q 038082 8 LELTDDELFRECEMDAYKSSGPGGQHRNKRESAVRLKH-------AP-----------------TG-VIAQAAEDRSQHK 62 (149)
Q Consensus 8 ~~i~~~~l~~d~~i~~~RssGpGGQ~vNk~~s~V~l~h-------~p-----------------tG-i~v~~~~~RSq~~ 62 (149)
..||.+++ +|+|+|||||||||||||+|+|+|++ +| .| |+|+|+++|||.+
T Consensus 15 ~~Ip~~~i----~~~f~RSsGPGGQ~VNKv~TkV~Lr~~v~~s~~l~~~~~~~l~~~~~~~i~~~g~l~I~s~~~RsQ~~ 90 (112)
T d1j26a_ 15 SYIPLDRL----SISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIEEPVRQKIALTHKNKINKAGELVLTSESSRYQFR 90 (112)
T ss_dssp CCCCTTTS----EEEEECCCCSSSSCCSSCCCEEEEEEEGGGCTTSCHHHHHHHHHHTTTTBCSSSEEEEEECCCSSHHH
T ss_pred CccCHHHe----EEEEEEcCCCCCCccceeccEEEEEEeccccccCCHHHHHHHHHHhhhcccCCCeEEEEEcccCCHHH
Confidence 35777666 99999999999999999999999985 23 35 9999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 038082 63 NRASALSRLRTLLALKV 79 (149)
Q Consensus 63 Nr~~A~~~L~~~l~~~~ 79 (149)
||++|+++|.++|..+.
T Consensus 91 Nr~~a~~kL~~li~~A~ 107 (112)
T d1j26a_ 91 NLAECLQKIRDMIAEAS 107 (112)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999996543
No 5
>d2ctfa1 d.51.1.1 (A:7-96) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.25 E-value=3.7 Score=26.14 Aligned_cols=48 Identities=13% Similarity=0.120 Sum_probs=32.3
Q ss_pred CCCcCCCCcc--C-ceEEEEEcCCceEEEeccccCHHHHHHHHHHHHHHHHHHH
Q 038082 28 GPGGQHRNKR--E-SAVRLKHAPTGVIAQAAEDRSQHKNRASALSRLRTLLALK 78 (149)
Q Consensus 28 GpGGQ~vNk~--~-s~V~l~h~ptGi~v~~~~~RSq~~Nr~~A~~~L~~~l~~~ 78 (149)
||||+++++- + +.|+|.+-+..-.|..... ..|-+.|.+.|.+++...
T Consensus 37 G~~G~~I~~i~~~~~~v~I~~~~~~~~v~i~G~---~~~ve~Ak~~I~~iv~el 87 (90)
T d2ctfa1 37 GKKGQNLAKITQQMPKVHIEFTEGEDKITLEGP---TEDVSVAQEQIEGMVKDL 87 (90)
T ss_dssp TTTTCHHHHHHHHCSSSEEEECSSSCEEEEEEC---HHHHHHHHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHcCCcEEeeCCCCceEEEeCC---HHHHHHHHHHHHHHHHHH
Confidence 9999999973 4 4788877655544444442 346778888877776543
No 6
>d2ctea1 d.51.1.1 (A:8-88) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.82 E-value=1.6 Score=27.30 Aligned_cols=48 Identities=10% Similarity=0.124 Sum_probs=30.4
Q ss_pred CCCcCCCCc--cCceEEEEEcCCc---eEEEeccccCHHHHHHHHHHHHHHHHHHH
Q 038082 28 GPGGQHRNK--RESAVRLKHAPTG---VIAQAAEDRSQHKNRASALSRLRTLLALK 78 (149)
Q Consensus 28 GpGGQ~vNk--~~s~V~l~h~ptG---i~v~~~~~RSq~~Nr~~A~~~L~~~l~~~ 78 (149)
|+||.++++ ..|.|+|.+-+.| -.|.... ...|-+.|.+.+.+++.+.
T Consensus 26 G~~G~~i~~I~~~tg~~I~~p~~~~~~~~v~I~G---~~~~v~~A~~~I~~iv~e~ 78 (81)
T d2ctea1 26 GKNGEKLQDLELKTATKIQIPRPDDPSNQIKITG---TKEGIEKARHEVLLISAEQ 78 (81)
T ss_dssp CSSSCHHHHHHHHTTCCCBCCCTTSSCCEEEEEE---CHHHHHHHHHHHHHHHHHH
T ss_pred CCCChhHHHHHHHhCCEEEECCCCCCCCEEEEEe---CHHHHHHHHHHHHHHHHHH
Confidence 899999994 5667777764422 2222222 2347788888887777553
No 7
>d2ctka1 d.51.1.1 (A:8-98) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.13 E-value=2.9 Score=26.48 Aligned_cols=49 Identities=18% Similarity=0.051 Sum_probs=33.7
Q ss_pred CCCcCCCCc--cCceEEEEEcCCc---eEEEeccccCHHHHHHHHHHHHHHHHHHHH
Q 038082 28 GPGGQHRNK--RESAVRLKHAPTG---VIAQAAEDRSQHKNRASALSRLRTLLALKV 79 (149)
Q Consensus 28 GpGGQ~vNk--~~s~V~l~h~ptG---i~v~~~~~RSq~~Nr~~A~~~L~~~l~~~~ 79 (149)
|+||.++++ -.|.|+|.+-|.| -+|..... ..|-+.|.++|..++....
T Consensus 26 G~~G~~i~~I~~~tg~~I~~p~~~~~~~~v~I~G~---~~~V~~A~~~I~~~v~e~~ 79 (91)
T d2ctka1 26 GQKGSGIRKMMDEFEVNIHVPAPELQSDIIAITGL---AANLDRAKAGLLERVKELQ 79 (91)
T ss_dssp CSSSHHHHHHHHHTCCEEECCCTTTTCCEEEEEEC---HHHHHHHHHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHhCCEEEECCCCCCcceEEEECC---HHHHHHHHHHHHHHHHHHH
Confidence 999999994 5677888875543 23444443 3588899999888876433
No 8
>d2ctma1 d.51.1.1 (A:8-88) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.72 E-value=4.5 Score=24.96 Aligned_cols=49 Identities=18% Similarity=0.232 Sum_probs=32.1
Q ss_pred CCCcCCCCc--cCceEEEEEcCCc----eEEEeccccCHHHHHHHHHHHHHHHHHHHH
Q 038082 28 GPGGQHRNK--RESAVRLKHAPTG----VIAQAAEDRSQHKNRASALSRLRTLLALKV 79 (149)
Q Consensus 28 GpGGQ~vNk--~~s~V~l~h~ptG----i~v~~~~~RSq~~Nr~~A~~~L~~~l~~~~ 79 (149)
|+||.++++ .+|.|+|.+-+.+ -.|+... ...|-+.|.+.|..++...+
T Consensus 26 G~~G~~i~~I~~~tg~~I~~p~~~~~~~~~v~I~G---~~~~V~~A~~~I~~i~~e~~ 80 (81)
T d2ctma1 26 GARGKAIRKIMDEFKVDIRFPQSGAPDPNCVTVTG---LPENVEEAIDHILNLEEEYL 80 (81)
T ss_dssp CSSSCHHHHHHHHHTCEEECCCTTCSCTTEEEEES---CHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHhCCEEEeCCccCCCCCEEEEeC---CHHHHHHHHHHHHHHHHHHh
Confidence 899999983 5677777764322 2344443 34577888888888776543
No 9
>d2ba0a3 d.51.1.1 (A:136-219) Exosome complex RNA-binding protein 1, ECR1 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=49.45 E-value=2.8 Score=26.68 Aligned_cols=44 Identities=14% Similarity=0.151 Sum_probs=29.0
Q ss_pred cCCCcCCCCc--cCceEEEEEcCCc-eEEEeccccCHHHHHHHHHHHHHHHH
Q 038082 27 SGPGGQHRNK--RESAVRLKHAPTG-VIAQAAEDRSQHKNRASALSRLRTLL 75 (149)
Q Consensus 27 sGpGGQ~vNk--~~s~V~l~h~ptG-i~v~~~~~RSq~~Nr~~A~~~L~~~l 75 (149)
=||||.++|+ .+|.|+|.--..| ++|.... .|-+.|.+.+..++
T Consensus 16 IG~gG~~I~~I~~~tg~~I~i~~~g~v~I~G~~-----e~v~~A~~~I~~i~ 62 (84)
T d2ba0a3 16 IGKKGSMIKLLKSELDVQIVVGQNGLIWVNGDR-----RKVSIAEEAIYLIE 62 (84)
T ss_dssp HCGGGHHHHHHHHHHTCEEEECTTSEEEEESCH-----HHHHHHHHHHHHHH
T ss_pred eCCcHHHHHHHHHHHCCEEEECCCCEEEEEeCH-----HHHHHHHHHHHHHH
Confidence 4899999994 6677777655577 5555422 46677766665544
No 10
>d1umqa_ a.4.1.12 (A:) Photosynthetic apparatus regulatory protein PprA (RegA), DNA-binding domain {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=49.34 E-value=2.1 Score=25.57 Aligned_cols=17 Identities=18% Similarity=0.280 Sum_probs=15.3
Q ss_pred HHHHHHHhCCCcccccC
Q 038082 133 VINAAKIYGLKSGEIQE 149 (149)
Q Consensus 133 ~~~aA~~L~~s~~~l~~ 149 (149)
++.+|+.||.|.+.|.|
T Consensus 36 ~~~aA~~LGIsR~TL~r 52 (60)
T d1umqa_ 36 VSETARRLNMHRRTLQR 52 (60)
T ss_dssp HHHHHHHHTSCHHHHHH
T ss_pred HHHHHHHHCCCHHHHHH
Confidence 99999999999988864
No 11
>d2ctla1 d.51.1.1 (A:8-91) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.35 E-value=8.1 Score=23.76 Aligned_cols=48 Identities=15% Similarity=0.121 Sum_probs=30.5
Q ss_pred cCCCcCCCCc--cCceEEEEEcCCc------eEEEeccccCHHHHHHHHHHHHHHHHHH
Q 038082 27 SGPGGQHRNK--RESAVRLKHAPTG------VIAQAAEDRSQHKNRASALSRLRTLLAL 77 (149)
Q Consensus 27 sGpGGQ~vNk--~~s~V~l~h~ptG------i~v~~~~~RSq~~Nr~~A~~~L~~~l~~ 77 (149)
=|+||.++++ -.|.|+|.+-|.+ =.|..... ..|-+.|..++.+++..
T Consensus 25 IG~~G~~i~~I~~~t~~~I~~~~~~~~~~~~~~i~I~G~---~e~v~~A~~~I~~~i~e 80 (84)
T d2ctla1 25 IGRKGAVITQIRLEHDVNIQFPDKDDGNQPQDQITITGY---EKNTEAARDAILRIVGE 80 (84)
T ss_dssp SCSSSCHHHHHHHHHTCEEECCCTTTCSSCSSEEEEESC---HHHHHHHHHHHHHHHHH
T ss_pred cCCCchhHHHHHHHhCCEEEECCCCCCCCCcceEEEECC---HHHHHHHHHHHHHHHHh
Confidence 3899999994 5567788774321 12334332 35667788888877654
No 12
>d1bl0a1 a.4.1.8 (A:9-62) MarA {Escherichia coli [TaxId: 562]}
Probab=43.27 E-value=2.1 Score=24.40 Aligned_cols=17 Identities=12% Similarity=0.141 Sum_probs=15.1
Q ss_pred HHHHHHHhCCCcccccC
Q 038082 133 VINAAKIYGLKSGEIQE 149 (149)
Q Consensus 133 ~~~aA~~L~~s~~~l~~ 149 (149)
+++.|+.+|+|++.|+|
T Consensus 22 l~~lA~~~~~s~~~l~r 38 (54)
T d1bl0a1 22 LEKVSERSGYSKWHLQR 38 (54)
T ss_dssp CHHHHHHSSSCHHHHHH
T ss_pred HHHHHHHHCcCHHHHHH
Confidence 89999999999988764
No 13
>d2ctja1 d.51.1.1 (A:8-89) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.86 E-value=12 Score=22.86 Aligned_cols=47 Identities=17% Similarity=0.144 Sum_probs=29.8
Q ss_pred CCCcCCCCcc--C-ceEEEEEcCCc---eEEEeccccCHHHHHHHHHHHHHHHHHH
Q 038082 28 GPGGQHRNKR--E-SAVRLKHAPTG---VIAQAAEDRSQHKNRASALSRLRTLLAL 77 (149)
Q Consensus 28 GpGGQ~vNk~--~-s~V~l~h~ptG---i~v~~~~~RSq~~Nr~~A~~~L~~~l~~ 77 (149)
|+||.+++.- + ++|.|.+-+.| =.|+.... ..|-+.|.+.+.+++.+
T Consensus 26 Gk~G~~I~~I~~~~~~~~I~~~~~~~~~~~v~I~G~---~~~v~~A~~~I~~~v~e 78 (82)
T d2ctja1 26 GTKGRLIRSIMEECGGVHIHFPVEGSGSDTVVIRGP---SSDVEKAKKQLLHLAEE 78 (82)
T ss_dssp CSSSHHHHHHHHHHTSCEEECCCTTTTCCEEEEESC---HHHHHHHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHcCCcEEEEeCCCCCCceEEEeCC---HHHHHHHHHHHHHHHhh
Confidence 8999999963 3 47887654333 23444332 44667887777776653
No 14
>d2jn6a1 a.4.1.19 (A:1-89) Uncharacterized protein Cgl2762 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=37.59 E-value=6.8 Score=24.47 Aligned_cols=34 Identities=9% Similarity=-0.003 Sum_probs=26.4
Q ss_pred CCChhhhhh-HHHhhc--hhhHHHHHHHhCCCccccc
Q 038082 115 PNNPKFALV-LPYSLL--LPFVINAAKIYGLKSGEIQ 148 (149)
Q Consensus 115 tyn~~f~~g-L~~llD--~L~~~~aA~~L~~s~~~l~ 148 (149)
.|.++|=.= +..++. -.-+...|+.||+|++.|.
T Consensus 5 ~Ys~EfK~~aV~l~~~~~g~s~~~vA~~lGIs~~tl~ 41 (89)
T d2jn6a1 5 TYSEEFKRDAVALYENSDGASLQQIANDLGINRVTLK 41 (89)
T ss_dssp CCCHHHHHHHHHHHTTGGGSCHHHHHHHHTSCHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCcHHHHHHHHCCCHHHHH
Confidence 488888666 656654 3669999999999998875
No 15
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.28 E-value=8.3 Score=25.02 Aligned_cols=13 Identities=23% Similarity=0.409 Sum_probs=11.4
Q ss_pred ceEEEEEcCCceE
Q 038082 39 SAVRLKHAPTGVI 51 (149)
Q Consensus 39 s~V~l~h~ptGi~ 51 (149)
|+|.|+|||.|+.
T Consensus 2 tKvVvRrLPP~Lt 14 (91)
T d1uw4a_ 2 SKVVIRRLPPTLT 14 (91)
T ss_dssp CEEEEEEECTTCC
T ss_pred ceEEEecCCCCCC
Confidence 7999999998874
No 16
>d1ixca1 a.4.5.37 (A:1-89) LysR-type regulatory protein CbnR {Ralstonia eutropha [TaxId: 106590]}
Probab=33.12 E-value=6.7 Score=24.58 Aligned_cols=17 Identities=24% Similarity=0.180 Sum_probs=15.6
Q ss_pred HHHHHHHhCCCcccccC
Q 038082 133 VINAAKIYGLKSGEIQE 149 (149)
Q Consensus 133 ~~~aA~~L~~s~~~l~~ 149 (149)
...+|+.|++|.+++|+
T Consensus 18 ~~~AA~~L~isq~avs~ 34 (89)
T d1ixca1 18 MAAAAKRLHVSQPPITR 34 (89)
T ss_dssp HHHHHHHHTCCHHHHHH
T ss_pred HHHHHHHhCCChHHHHH
Confidence 89999999999999874
No 17
>d1d5ya1 a.4.1.8 (A:3-56) Rob transcription factor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=28.97 E-value=3.8 Score=23.27 Aligned_cols=17 Identities=24% Similarity=0.173 Sum_probs=14.8
Q ss_pred HHHHHHHhCCCcccccC
Q 038082 133 VINAAKIYGLKSGEIQE 149 (149)
Q Consensus 133 ~~~aA~~L~~s~~~l~~ 149 (149)
.++.|+.+++|++.|+|
T Consensus 22 l~~lA~~~~~S~~~l~r 38 (54)
T d1d5ya1 22 LDNVAAKAGYSKWHLQR 38 (54)
T ss_dssp CHHHHTTTSSCHHHHHH
T ss_pred HHHHHHHHCcCHHHHHH
Confidence 88999999999988764
No 18
>d2z0sa2 d.51.1.1 (A:148-234) Exosome complex RNA-binding protein 1, ECR1 {Aeropyrum pernix [TaxId: 56636]}
Probab=28.54 E-value=13 Score=23.77 Aligned_cols=44 Identities=11% Similarity=0.130 Sum_probs=28.6
Q ss_pred ccCCCcCCCCc--cCceEEEEEcCCc-eEEEeccccCHHHHHHHHHHHHHH
Q 038082 26 SSGPGGQHRNK--RESAVRLKHAPTG-VIAQAAEDRSQHKNRASALSRLRT 73 (149)
Q Consensus 26 ssGpGGQ~vNk--~~s~V~l~h~ptG-i~v~~~~~RSq~~Nr~~A~~~L~~ 73 (149)
==||||-++|. .+|.|+|.--..| +.|.+.+ ..+.+.|.+.+..
T Consensus 15 vIG~gG~~ik~i~~~t~~~I~I~d~G~V~I~g~~----~~~~~~A~~~I~~ 61 (87)
T d2z0sa2 15 VIGRKMSMLKTLEEKTECKIFVARNGRIHLECPN----EDLEAIAVMAIKI 61 (87)
T ss_dssp GTCGGGHHHHHHHHHHCCEEEEETTTEEEEECSC----HHHHHHHHHHHHH
T ss_pred eECCCCcHHHHHHHHHCCEEEECCCcEEEEEeCC----HHHHHHHHHHHHH
Confidence 34999999994 5667777666788 7777754 2344445444443
No 19
>d1ijwc_ a.4.1.2 (C:) HIN recombinase (DNA-binding domain) {Synthetic}
Probab=28.34 E-value=7.9 Score=22.12 Aligned_cols=17 Identities=18% Similarity=0.278 Sum_probs=15.4
Q ss_pred HHHHHHHhCCCcccccC
Q 038082 133 VINAAKIYGLKSGEIQE 149 (149)
Q Consensus 133 ~~~aA~~L~~s~~~l~~ 149 (149)
+...|+.||.|.+.|+|
T Consensus 24 ~~~iA~~~gVSr~TiYr 40 (47)
T d1ijwc_ 24 RQQLAIIFGIGVSTLYR 40 (47)
T ss_dssp HHHHHHHHTCCHHHHHH
T ss_pred HHHHHHHHCcCHHHHHh
Confidence 99999999999998865
No 20
>d1tuaa1 d.51.1.1 (A:1-84) Hypothetical protein APE0754 {Aeropyrum pernix [TaxId: 56636]}
Probab=28.14 E-value=14 Score=23.27 Aligned_cols=47 Identities=17% Similarity=0.313 Sum_probs=30.9
Q ss_pred CCCcCCCCc--cCceEEEEEc-CCc-eEEEeccccCHHHHHHHHHHHHHHH
Q 038082 28 GPGGQHRNK--RESAVRLKHA-PTG-VIAQAAEDRSQHKNRASALSRLRTL 74 (149)
Q Consensus 28 GpGGQ~vNk--~~s~V~l~h~-ptG-i~v~~~~~RSq~~Nr~~A~~~L~~~ 74 (149)
||||-+++. -.|.|+|.-- -+| +.+.+...-....+...|.+.++++
T Consensus 19 G~gG~~Ik~i~~~tg~~I~Id~d~g~v~i~~~~~~~~~~a~~~a~~iI~aI 69 (84)
T d1tuaa1 19 GPRGEVKAEIMRRTGTVITVDTENSMVIVEPEAEGIPPVNLMKAAEVVKAI 69 (84)
T ss_dssp CGGGHHHHHHHHHHTEEEEEETTTTEEEEEESSTTSCHHHHHHHHHHHHHH
T ss_pred cCCchhHHHHHHHHCCEEEEEcCCCeEEEecCCccccHHHHHHHHHHHHHH
Confidence 889999884 4566666543 345 6777766666666666676655543
No 21
>d1b9ma1 a.4.5.8 (A:-1-126) N-terminal domain of molybdate-dependent transcriptional regulator ModE {Escherichia coli [TaxId: 562]}
Probab=27.58 E-value=9.3 Score=24.92 Aligned_cols=26 Identities=19% Similarity=0.050 Sum_probs=18.8
Q ss_pred HHHhhchhhHHHHHHHhCCCcccccC
Q 038082 124 LPYSLLLPFVINAAKIYGLKSGEIQE 149 (149)
Q Consensus 124 L~~llD~L~~~~aA~~L~~s~~~l~~ 149 (149)
+..+.+.=-...||+.|+.|.+++|+
T Consensus 26 ~~ai~~~gs~~~AA~~l~~sq~avs~ 51 (127)
T d1b9ma1 26 LKHIALSGSISQGAKDAGISYKSAWD 51 (127)
T ss_dssp HHHHHHHSSHHHHHHHHTCCHHHHHH
T ss_pred HHHHHHhCChHHHHHHhcCChhHHHH
Confidence 33333333399999999999998874
No 22
>d2je6i3 d.51.1.1 (I:153-221) Exosome complex RNA-binding protein 1, ECR1 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=27.17 E-value=3.8 Score=25.04 Aligned_cols=28 Identities=18% Similarity=0.210 Sum_probs=16.9
Q ss_pred CCCcCCCC--ccCceEEEEEcCCc-eEEEec
Q 038082 28 GPGGQHRN--KRESAVRLKHAPTG-VIAQAA 55 (149)
Q Consensus 28 GpGGQ~vN--k~~s~V~l~h~ptG-i~v~~~ 55 (149)
||||.+++ +.+|.|+|.--..| +.+.+.
T Consensus 17 GkgG~~Ik~i~~~tg~~I~i~~~g~v~I~g~ 47 (69)
T d2je6i3 17 GKNKSMYETLTSKSGCSIFVANNGRIWATCP 47 (69)
T ss_dssp CGGGHHHHHHHTTC---CEECTTSEEEC---
T ss_pred CCchhHHHHHHHHHCCEEEEcCCCEEEEEeC
Confidence 89999999 47788887665567 666664
No 23
>d2esna1 a.4.5.37 (A:3-91) Probable LysR-type transcriptional regulator PA0477 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=26.18 E-value=14 Score=22.94 Aligned_cols=26 Identities=12% Similarity=-0.036 Sum_probs=20.1
Q ss_pred HHHhhchhhHHHHHHHhCCCcccccC
Q 038082 124 LPYSLLLPFVINAAKIYGLKSGEIQE 149 (149)
Q Consensus 124 L~~llD~L~~~~aA~~L~~s~~~l~~ 149 (149)
+..+.+.--...+|+.|+.|.+++|+
T Consensus 14 f~~v~~~gs~t~AA~~l~isq~avs~ 39 (89)
T d2esna1 14 FDALYRHRNVGTAASELAISASAFSH 39 (89)
T ss_dssp HHHHHHHSSHHHHHHHHTCCHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHCCCCcHhhH
Confidence 44555555599999999999998874
No 24
>d1g2ha_ a.4.1.12 (A:) Transcriptional regulator TyrR, C-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=24.36 E-value=8.5 Score=22.80 Aligned_cols=17 Identities=18% Similarity=0.210 Sum_probs=14.7
Q ss_pred HHHHHHHhCCCcccccC
Q 038082 133 VINAAKIYGLKSGEIQE 149 (149)
Q Consensus 133 ~~~aA~~L~~s~~~l~~ 149 (149)
...+|+.||.|.+.|.|
T Consensus 36 ~~~aA~~Lgisr~tL~r 52 (61)
T d1g2ha_ 36 TRKLAQRLGVSHTAIAN 52 (61)
T ss_dssp HHHHHHHTTSCTHHHHH
T ss_pred HHHHHHHHCCCHHHHHH
Confidence 67899999999988764
No 25
>d2axya1 d.51.1.1 (A:11-81) Poly(RC)-binding protein 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.75 E-value=14 Score=21.89 Aligned_cols=46 Identities=20% Similarity=0.219 Sum_probs=26.7
Q ss_pred CCCcCCCC--ccCceEEEEEcCCc---eEEEeccccCHHHHHHHHHHHHHHHHH
Q 038082 28 GPGGQHRN--KRESAVRLKHAPTG---VIAQAAEDRSQHKNRASALSRLRTLLA 76 (149)
Q Consensus 28 GpGGQ~vN--k~~s~V~l~h~ptG---i~v~~~~~RSq~~Nr~~A~~~L~~~l~ 76 (149)
|+||.+++ ..+|.++|..-+.+ =+++...+ ..+-..|...+.++|.
T Consensus 20 Gk~G~~I~~I~~~tga~I~i~~~~~~er~v~I~G~---~~~v~~A~~~I~~~l~ 70 (71)
T d2axya1 20 GKKGESVKKMREESGARINISEGNCPERIITLAGP---TNAIFKAFAMIIDKLE 70 (71)
T ss_dssp CGGGHHHHHHHHHHCCEEEECSSCCSEEEEEEEEC---HHHHHHHHHHHHHHHH
T ss_pred CCCChhHHHHHHHhCCEEEEcCCCCCcceEEEEEC---HHHHHHHHHHHHHHhc
Confidence 77788777 35566666544433 13444332 4567777777766653
No 26
>d1u3em2 d.285.1.1 (M:106-174) Intron-encoded homing endonuclease I-HmuI {Bacteriophage SP01 [TaxId: 10685]}
Probab=23.63 E-value=10 Score=23.57 Aligned_cols=16 Identities=25% Similarity=0.395 Sum_probs=13.7
Q ss_pred HHHHHHHhCCCccccc
Q 038082 133 VINAAKIYGLKSGEIQ 148 (149)
Q Consensus 133 ~~~aA~~L~~s~~~l~ 148 (149)
++-||++||+++++++
T Consensus 33 ~~kAaelLGL~r~~Vs 48 (69)
T d1u3em2 33 TKCACEELGLTRGKVT 48 (69)
T ss_dssp HHHHHHHHTCCHHHHH
T ss_pred HHHHHHHhCcchhHHH
Confidence 7889999999988764
No 27
>d2g7la1 a.4.1.9 (A:16-83) Putative transcriptional regulator SCO7704 {Streptomyces coelicolor [TaxId: 1902]}
Probab=23.53 E-value=18 Score=21.12 Aligned_cols=17 Identities=6% Similarity=-0.046 Sum_probs=15.2
Q ss_pred HHHHHHHhCCCcccccC
Q 038082 133 VINAAKIYGLKSGEIQE 149 (149)
Q Consensus 133 ~~~aA~~L~~s~~~l~~ 149 (149)
....|+.+|+|.+.|++
T Consensus 27 i~~ia~~~gvs~~~~y~ 43 (68)
T d2g7la1 27 MRRLAQELDTGPASLYV 43 (68)
T ss_dssp HHHHHHHTTSCHHHHTT
T ss_pred HHHHHHHHCcCHhHhhH
Confidence 99999999999998764
No 28
>d1z05a1 a.4.5.63 (A:10-80) Transcriptional regulator VC2007 N-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=22.77 E-value=11 Score=22.39 Aligned_cols=16 Identities=25% Similarity=0.223 Sum_probs=14.4
Q ss_pred HHHHHHHhCCCccccc
Q 038082 133 VINAAKIYGLKSGEIQ 148 (149)
Q Consensus 133 ~~~aA~~L~~s~~~l~ 148 (149)
..+.|+.+|+|.++++
T Consensus 23 r~eLa~~~glS~~Tv~ 38 (71)
T d1z05a1 23 RIDLSKESELAPASIT 38 (71)
T ss_dssp HHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHCCCHHHHH
Confidence 8999999999998765
No 29
>d1zk8a1 a.4.1.9 (A:6-77) Transcriptional regulator BC5000 {Bacillus cereus [TaxId: 1396]}
Probab=21.95 E-value=20 Score=20.92 Aligned_cols=22 Identities=14% Similarity=0.173 Sum_probs=17.2
Q ss_pred hchhhHHHHHHHhCCCcccccC
Q 038082 128 LLLPFVINAAKIYGLKSGEIQE 149 (149)
Q Consensus 128 lD~L~~~~aA~~L~~s~~~l~~ 149 (149)
++.+-+...|+.+|+|.+.|++
T Consensus 21 ~~~~t~~~Ia~~agvs~~slY~ 42 (72)
T d1zk8a1 21 VQEVTLASLAQTLGVRSPSLYN 42 (72)
T ss_dssp GGGCCHHHHHHHHTSCHHHHTT
T ss_pred CCcccHHHHHHHhCCCHHHHHH
Confidence 3334499999999999998764
No 30
>d2hyja1 a.4.1.9 (A:8-82) Putative transcriptional regulator SCO4940 {Streptomyces coelicolor [TaxId: 1902]}
Probab=21.40 E-value=17 Score=21.41 Aligned_cols=17 Identities=6% Similarity=0.118 Sum_probs=15.0
Q ss_pred HHHHHHHhCCCcccccC
Q 038082 133 VINAAKIYGLKSGEIQE 149 (149)
Q Consensus 133 ~~~aA~~L~~s~~~l~~ 149 (149)
....|+.+|+|.+.+++
T Consensus 28 ~~~Ia~~agvs~~~~Y~ 44 (75)
T d2hyja1 28 IGRLAEELEMSKSGVHK 44 (75)
T ss_dssp HHHHHHHHTCCHHHHHT
T ss_pred HHHHHHHHCcCHHHHHH
Confidence 99999999999988763
No 31
>d1viga_ d.51.1.1 (A:) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.32 E-value=18 Score=21.39 Aligned_cols=44 Identities=20% Similarity=0.308 Sum_probs=26.7
Q ss_pred CCCcCCCCc--cCceEEEEEcCCc---eEEEeccccCHHHHHHHHHHHHHHH
Q 038082 28 GPGGQHRNK--RESAVRLKHAPTG---VIAQAAEDRSQHKNRASALSRLRTL 74 (149)
Q Consensus 28 GpGGQ~vNk--~~s~V~l~h~ptG---i~v~~~~~RSq~~Nr~~A~~~L~~~ 74 (149)
|+||+++++ -+|.|+|.+-+.+ =.|..... ..|-+.|.+++.++
T Consensus 21 G~~G~~i~~I~~~tg~~I~i~~~~~~~~~v~I~G~---~~~v~~A~~~I~~i 69 (71)
T d1viga_ 21 GKSGANINRIKDQYKVSVRIPPDSEKSNLIRIEGD---PQGVQQAKRELLEL 69 (71)
T ss_dssp CSSCCHHHHHHHHTCCEEECCCCCSSSEEEEEEES---SHHHHHHHHHHHHT
T ss_pred CCCCchHHHHHHHhCCEEEeCCCCCCCCEEEEECC---HHHHHHHHHHHHHH
Confidence 899999984 5667777764422 23333333 34567776666543
No 32
>d2hsga1 a.35.1.5 (A:2-58) Glucose-resistance amylase regulator CcpA, N-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=21.25 E-value=9.3 Score=22.59 Aligned_cols=17 Identities=6% Similarity=0.196 Sum_probs=14.0
Q ss_pred HHHHHHHhCCCcccccC
Q 038082 133 VINAAKIYGLKSGEIQE 149 (149)
Q Consensus 133 ~~~aA~~L~~s~~~l~~ 149 (149)
.++.|+..|+|++..||
T Consensus 4 i~dvA~~agvS~~TVSr 20 (57)
T d2hsga1 4 IYDVAREASVSMATVSR 20 (57)
T ss_dssp HHHHHHHTTSCHHHHHH
T ss_pred HHHHHHHHCcCHHHHHH
Confidence 46789999999988775
No 33
>d1pina2 d.26.1.1 (A:45-163) Mitotic rotamase PIN1, domain 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.18 E-value=35 Score=22.00 Aligned_cols=16 Identities=25% Similarity=0.414 Sum_probs=13.5
Q ss_pred cCCCCccCceEEEEEc
Q 038082 31 GQHRNKRESAVRLKHA 46 (149)
Q Consensus 31 GQ~vNk~~s~V~l~h~ 46 (149)
|.+.++....|++.||
T Consensus 1 ~~~~~~~p~~vr~~HI 16 (119)
T d1pina2 1 GKNGQGEPARVRCSHL 16 (119)
T ss_dssp CCCSCCCCSCEEEEEE
T ss_pred CCCCCCCCcEEEEEEE
Confidence 5677788899999996
No 34
>d2fd5a1 a.4.1.9 (A:1-76) Probable transcriptional regulator PA3133 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.78 E-value=30 Score=20.13 Aligned_cols=17 Identities=24% Similarity=0.196 Sum_probs=15.3
Q ss_pred HHHHHHHhCCCcccccC
Q 038082 133 VINAAKIYGLKSGEIQE 149 (149)
Q Consensus 133 ~~~aA~~L~~s~~~l~~ 149 (149)
+...|+..|+|.+.+++
T Consensus 30 i~~Ia~~agvs~~t~Y~ 46 (76)
T d2fd5a1 30 VGEVMGAAGLTVGGFYA 46 (76)
T ss_dssp HHHHHHHTTCCGGGGGG
T ss_pred HHHHHHHhCCCccchhh
Confidence 99999999999998863
No 35
>d1r1ua_ a.4.5.5 (A:) Metal-sensing transcriptional repressor CzrA {Staphylococcus aureus [TaxId: 1280]}
Probab=20.56 E-value=16 Score=23.10 Aligned_cols=16 Identities=13% Similarity=0.177 Sum_probs=14.5
Q ss_pred HHHHHHHhCCCccccc
Q 038082 133 VINAAKIYGLKSGEIQ 148 (149)
Q Consensus 133 ~~~aA~~L~~s~~~l~ 148 (149)
+.+.|+.||+|.+++|
T Consensus 34 v~el~~~l~~s~~~vS 49 (94)
T d1r1ua_ 34 VGHISHQLNLSQSNVS 49 (94)
T ss_dssp HHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHCCCHHHHH
Confidence 8999999999998876
No 36
>d1j5ya1 a.4.5.1 (A:3-67) Putative transcriptional regulator TM1602, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=20.01 E-value=14 Score=21.62 Aligned_cols=16 Identities=13% Similarity=-0.039 Sum_probs=13.6
Q ss_pred HHHHHHHhCCCccccc
Q 038082 133 VINAAKIYGLKSGEIQ 148 (149)
Q Consensus 133 ~~~aA~~L~~s~~~l~ 148 (149)
..+.|+.|++|..++.
T Consensus 25 ~~~La~~l~VS~~TI~ 40 (65)
T d1j5ya1 25 GAQLAEELSVSRQVIV 40 (65)
T ss_dssp HHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHCCCHHHHH
Confidence 8999999999987654
Done!