BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>038085
MILQLLLLLYLGEKLKLLFDVADIDLSSSICIVFGCCPDDWQSNWGEDEFPDMAKASVAL
SFLAFVALGFSSLISGYALYNQKSR

High Scoring Gene Products

Symbol, full name Information P value
AT2G36330 protein from Arabidopsis thaliana 9.5e-14
AT5G40300 protein from Arabidopsis thaliana 1.5e-12
AT5G62820 protein from Arabidopsis thaliana 5.7e-10

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  038085
        (85 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2049500 - symbol:AT2G36330 "AT2G36330" species...   179  9.5e-14   1
TAIR|locus:2170603 - symbol:AT5G40300 "AT5G40300" species...   168  1.5e-12   1
TAIR|locus:2170703 - symbol:AT5G62820 "AT5G62820" species...   147  5.7e-10   1


>TAIR|locus:2049500 [details] [associations]
            symbol:AT2G36330 "AT2G36330" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0016020 "membrane" evidence=ISS]
            [GO:0005886 "plasma membrane" evidence=IDA] GO:GO:0016021
            GO:GO:0005886 EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC006921
            InterPro:IPR006702 Pfam:PF04535 EMBL:BT002934 IPI:IPI00528860
            PIR:D84779 RefSeq:NP_181174.2 UniGene:At.44754 PRIDE:Q84WP5
            EnsemblPlants:AT2G36330.1 GeneID:818206 KEGG:ath:AT2G36330
            TAIR:At2g36330 eggNOG:NOG256024 HOGENOM:HOG000029077
            InParanoid:Q84WP5 OMA:DTSMAIV PhylomeDB:Q84WP5
            ProtClustDB:CLSN2920578 Genevestigator:Q84WP5 Uniprot:Q84WP5
        Length = 283

 Score = 179 (68.1 bits), Expect = 9.5e-14, P = 9.5e-14
 Identities = 33/46 (71%), Positives = 39/46 (84%)

Query:    39 DDWQSNWGEDEFPDMAKASVALSFLAFVALGFSSLISGYALYNQKS 84
             DDW SNWG+DEF +MA AS+A+SFLAF+A  FSSLISGY L+NQ S
Sbjct:   237 DDWVSNWGKDEFTEMASASIAMSFLAFLAFAFSSLISGYNLFNQGS 282


>TAIR|locus:2170603 [details] [associations]
            symbol:AT5G40300 "AT5G40300" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0016020 "membrane" evidence=ISS] [GO:0005886
            "plasma membrane" evidence=IDA] GO:GO:0016021 GO:GO:0005886
            EMBL:CP002688 GenomeReviews:BA000015_GR InterPro:IPR006702
            Pfam:PF04535 HOGENOM:HOG000029077 EMBL:AB006702 EMBL:BT010719
            EMBL:BT011792 IPI:IPI00547305 RefSeq:NP_198846.1 UniGene:At.30291
            PaxDb:Q9FNE8 PRIDE:Q9FNE8 EnsemblPlants:AT5G40300.1 GeneID:834028
            KEGG:ath:AT5G40300 TAIR:At5g40300 eggNOG:NOG247391
            InParanoid:Q9FNE8 PhylomeDB:Q9FNE8 Genevestigator:Q9FNE8
            Uniprot:Q9FNE8
        Length = 270

 Score = 168 (64.2 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 30/41 (73%), Positives = 36/41 (87%)

Query:    39 DDWQSNWGEDEFPDMAKASVALSFLAFVALGFSSLISGYAL 79
             DDWQSNWG D+FPD+A+ASVALS+++FVA  F SL SGYAL
Sbjct:   224 DDWQSNWGADKFPDLARASVALSYVSFVAFAFCSLASGYAL 264


>TAIR|locus:2170703 [details] [associations]
            symbol:AT5G62820 "AT5G62820" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0016020 "membrane" evidence=ISS] [GO:0005886
            "plasma membrane" evidence=IDA] GO:GO:0016021 GO:GO:0005886
            EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB009053
            InterPro:IPR006702 Pfam:PF04535 HOGENOM:HOG000029077 EMBL:BT022001
            EMBL:BT023479 IPI:IPI00540013 RefSeq:NP_201088.1 UniGene:At.5422
            UniGene:At.71286 PaxDb:Q501G6 PRIDE:Q501G6
            EnsemblPlants:AT5G62820.1 GeneID:836403 KEGG:ath:AT5G62820
            TAIR:At5g62820 eggNOG:NOG261526 InParanoid:Q501G6 OMA:QMATASI
            PhylomeDB:Q501G6 ProtClustDB:CLSN2916796 Genevestigator:Q501G6
            Uniprot:Q501G6
        Length = 297

 Score = 147 (56.8 bits), Expect = 5.7e-10, P = 5.7e-10
 Identities = 31/59 (52%), Positives = 38/59 (64%)

Query:    26 LSSSICIVFGCCPDDWQSNWGEDEFPDMAKASVALSFLAFVALGFSSLISGYALYNQKS 84
             +S+S C       DDW SNWG+DEF  MA AS+A+SFLAF A   S+LIS Y L+   S
Sbjct:   240 MSASSCAATRV--DDWVSNWGKDEFTQMATASIAVSFLAFGAFAVSALISSYRLFTHAS 296


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.137   0.439    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       85        69   0.00091  102 3  11 22  0.42    28
                                                     29  0.39    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  538 (57 KB)
  Total size of DFA:  107 KB (2073 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.83u 0.14s 7.97t   Elapsed:  00:00:01
  Total cpu time:  7.83u 0.14s 7.97t   Elapsed:  00:00:01
  Start:  Fri May 10 13:48:24 2013   End:  Fri May 10 13:48:25 2013

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