BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038096
(211 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|86156022|gb|ABC86742.1| RNA recognition motif-containing protein [Vitis pseudoreticulata]
Length = 194
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/189 (61%), Positives = 141/189 (74%), Gaps = 9/189 (4%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
++ SGC+VYIGNLDE+V++RVLYDILIQAGRVVDLYIPRDKETD+PKGFAF EYE+EEI
Sbjct: 2 SAKSGCSVYIGNLDERVSDRVLYDILIQAGRVVDLYIPRDKETDRPKGFAFAEYETEEIA 61
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISH 145
YA+KLFSG+VTLYNRTL+FA+SGQDK SS TP S+ P P+P N ME S
Sbjct: 62 DYAVKLFSGLVTLYNRTLKFAISGQDK---PSSAAITPTSNSSLEPKPHPVPFNNMENSQ 118
Query: 146 HSMRISVPRHYSS-----EEPPPPGVTL-ETNGYETHLNVTNYDYSRRVFGATLDSISRS 199
HSM + P ++ + P TL + N Y + L+ +YDYSRRVFGATLDSISR+
Sbjct: 119 HSMGLRTPCRLAAHPVNYAQVPASSDTLHQPNRYSSQLDGHSYDYSRRVFGATLDSISRT 178
Query: 200 RSGHYNSSN 208
RS +Y+SSN
Sbjct: 179 RSRYYDSSN 187
>gi|356576175|ref|XP_003556209.1| PREDICTED: uncharacterized protein LOC100803118 [Glycine max]
Length = 196
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 140/190 (73%), Gaps = 7/190 (3%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
MSGNSN C+VYIGNLDE+V +RVLYDILIQAGRVVDL+IP+DKE++KPKGFAF EYE+E
Sbjct: 1 MSGNSN--CSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETE 58
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGME 142
EI YA++LFSG++TLYNRTL+FA+SG+DK N S P + R P P+P+N E
Sbjct: 59 EIADYAVRLFSGLITLYNRTLKFAISGRDKTTSNGSTAIAPTLNSSQRPRPYPVPINNSE 118
Query: 143 ISHHSMRISVPRHYS-----SEEPPPPGVTLETNGYETHLNVTNYDYSRRVFGATLDSIS 197
H R+S P +S + + P VT +++GY +H + NY+YSRR FGATLDSIS
Sbjct: 119 NFQHPARLSTPDRFSDYPVNNSQVLPSRVTDQSSGYGSHYSGNNYEYSRRAFGATLDSIS 178
Query: 198 RSRSGHYNSS 207
RSRS H++ S
Sbjct: 179 RSRSRHFDKS 188
>gi|225460024|ref|XP_002271789.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|297734803|emb|CBI17037.3| unnamed protein product [Vitis vinifera]
Length = 194
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 141/189 (74%), Gaps = 9/189 (4%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
++ SGC+VYIGNLDE+V++RVLYDILIQAGRVVDLYIPRDKETD+PKGFAF EYE+EEI
Sbjct: 2 SAKSGCSVYIGNLDERVSDRVLYDILIQAGRVVDLYIPRDKETDRPKGFAFAEYETEEIA 61
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISH 145
YA+KLFSG+VTLYNRTL+FA+SGQDK SS TP S+ P P+P N ME S
Sbjct: 62 DYAVKLFSGLVTLYNRTLKFAISGQDK---PSSAAITPTSNSSLEPKPHPVPFNNMENSQ 118
Query: 146 HSMRISVPRHYSSE-----EPPPPGVTL-ETNGYETHLNVTNYDYSRRVFGATLDSISRS 199
HSM + P ++ + P TL + N Y + L+ +YDYSRRVFGATLDSISR+
Sbjct: 119 HSMGLRTPCRLAAHPVNYAQVPASSDTLHQPNRYSSQLDGHSYDYSRRVFGATLDSISRT 178
Query: 200 RSGHYNSSN 208
RS +++SSN
Sbjct: 179 RSRYHDSSN 187
>gi|356535691|ref|XP_003536377.1| PREDICTED: RNA-binding protein 7-like [Glycine max]
Length = 186
Score = 209 bits (531), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 130/177 (73%), Gaps = 7/177 (3%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
MSGNSN C+VYIGNLDE+V +RVLYDILIQAGRVVDL+IP+DKE++KPKGFAF EYE+E
Sbjct: 1 MSGNSN--CSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETE 58
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGME 142
EI YA++LFSG++TLYNRTL+FA+SG+DK N S TP S+ R P P+ +N E
Sbjct: 59 EIADYAVRLFSGLITLYNRTLKFAISGRDKTTSNGSTAITPTSNSSQRPRPYPVSINNSE 118
Query: 143 ISHHSMRISVPRHYSS-----EEPPPPGVTLETNGYETHLNVTNYDYSRRVFGATLD 194
HS R+S P +S + P VT +++GY +H + NY+YSRR FGATLD
Sbjct: 119 NFQHSARLSTPDRFSDHPVNYSQVLPSRVTDQSSGYGSHYSGNNYEYSRRAFGATLD 175
>gi|224127921|ref|XP_002329210.1| predicted protein [Populus trichocarpa]
gi|222870991|gb|EEF08122.1| predicted protein [Populus trichocarpa]
Length = 195
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/191 (57%), Positives = 146/191 (76%), Gaps = 7/191 (3%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
MSG S+ C++YIGNLDE+V++RVLYDILIQAGRVVDL+IPRD+ETDKPKG+AF EYE+E
Sbjct: 1 MSGPSS--CSIYIGNLDERVSDRVLYDILIQAGRVVDLHIPRDRETDKPKGYAFAEYETE 58
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPV-PMPVNGM 141
EI YA+KLFSG+VTLYNRTL+FA+SGQDK AQN+ P+ + +R P P+ +N +
Sbjct: 59 EIADYAVKLFSGLVTLYNRTLKFAISGQDKLAQNNLNGVVPVPNSSNRQRPSHPVLINNL 118
Query: 142 EISHHSMRISVPRHYSS----EEPPPPGVTLETNGYETHLNVTNYDYSRRVFGATLDSIS 197
EI +HSMR+S P S+ + PPGVT +NGY ++ N + D RR+FG+ +++IS
Sbjct: 119 EIPNHSMRLSAPSRVSAYPANDSLAPPGVTNLSNGYGSNSNGNSNDSDRRLFGSAVNAIS 178
Query: 198 RSRSGHYNSSN 208
RSRS Y++SN
Sbjct: 179 RSRSRWYDTSN 189
>gi|357443447|ref|XP_003592001.1| Peptidyl-prolyl cis-trans isomerase [Medicago truncatula]
gi|355481049|gb|AES62252.1| Peptidyl-prolyl cis-trans isomerase [Medicago truncatula]
Length = 200
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 103/187 (55%), Positives = 129/187 (68%), Gaps = 11/187 (5%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
MSGNS+ C VYIGNLDE+V +R+LYDILIQAGRVVDL+IP+DKE++KPKGFAF EYE+E
Sbjct: 1 MSGNSS--CTVYIGNLDERVTDRILYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETE 58
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGME 142
EI YA++LFSG+VTLY RTL+FA+SG+DKN NSS TTP S+ R P P+ +N E
Sbjct: 59 EIADYAVRLFSGLVTLYKRTLKFAISGRDKNTPNSSTATTPSSNSSQRPRPYPVQINSSE 118
Query: 143 ISHHSMRISVPRHYSSEEPPPPGV---------TLETNGYETHLNVTNYDYSRRVFGATL 193
HS R S+P +S V T ++N Y +H + D+SRR FG L
Sbjct: 119 NFQHSARQSIPDRFSDRALNYSQVGELLGRNRATNQSNAYGSHFGGNHLDHSRRAFGEEL 178
Query: 194 DSISRSR 200
D+ SRSR
Sbjct: 179 DNASRSR 185
>gi|217074838|gb|ACJ85779.1| unknown [Medicago truncatula]
Length = 218
Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 129/192 (67%), Gaps = 16/192 (8%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
MSGNS+ C VYIGNLDE+V +R+LYDILIQAGRVVDL+IP+DKE++KPKGFAF EYE+E
Sbjct: 1 MSGNSS--CTVYIGNLDERVTDRILYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETE 58
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFA-----LSGQDKNAQNSSMTTTPLSSRKSRSDPVPMP 137
EI YA++LFSG+VTLY RTL+FA LSG+DKN NSS TTP S+ R P P+
Sbjct: 59 EIADYAVRLFSGLVTLYKRTLKFASANKQLSGRDKNTPNSSTATTPSSNSSQRPRPYPVQ 118
Query: 138 VNGMEISHHSMRISVPRHYSSEEPPPPGV---------TLETNGYETHLNVTNYDYSRRV 188
+N E HS R S+P +S V T ++N Y +H + D+SRR
Sbjct: 119 INSSENFQHSARQSIPDRFSDRALNYSQVGELLGRNRATNQSNAYGSHFGGNHLDHSRRA 178
Query: 189 FGATLDSISRSR 200
FG LD+ SRSR
Sbjct: 179 FGEELDNASRSR 190
>gi|255564912|ref|XP_002523449.1| spliceosome associated protein, putative [Ricinus communis]
gi|223537277|gb|EEF38908.1| spliceosome associated protein, putative [Ricinus communis]
Length = 201
Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 125/179 (69%), Gaps = 9/179 (5%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
M G+S S C VYIGNLDE+V+ERVLYDILIQAGRVV+LYIPRDKETDK KG+AF EYESE
Sbjct: 1 MHGSSTS-CTVYIGNLDERVSERVLYDILIQAGRVVELYIPRDKETDKSKGYAFAEYESE 59
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGME 142
+I YA+KLFSG+V L+NRTL+FA+SGQDK QN S S+ ++ P PMP+N ++
Sbjct: 60 QIADYAVKLFSGLVILHNRTLKFAISGQDKALQNVSSGAMHASNSSNKPRPYPMPMNNVD 119
Query: 143 ISHHSMRISVPRHYS------SEEPPPPGVTLETNGYETHLNVTNYD--YSRRVFGATL 193
++ SMR+S S S+ P GVT NG+ + N NYD RRVFG++
Sbjct: 120 NTNQSMRLSASCRISAYPYNHSQVPVSSGVTHHHNGFGSQFNGVNYDNGIGRRVFGSSF 178
>gi|297813453|ref|XP_002874610.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297320447|gb|EFH50869.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 171
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/188 (54%), Positives = 125/188 (66%), Gaps = 27/188 (14%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
++NS C VYIGN+DE+V++RVLYDI+IQAGRV+DL+IPRDKETDKPKGFAF EYE+EEI
Sbjct: 2 STNSNCTVYIGNVDERVSDRVLYDIMIQAGRVIDLHIPRDKETDKPKGFAFAEYETEEIA 61
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISH 145
YA+KLFSG+V+LYNR L+FA+SGQDK NS T P S SD G H
Sbjct: 62 DYAVKLFSGLVSLYNRNLKFAISGQDKLQANSGQRTRPQSLAFEHSD------RGYN-HH 114
Query: 146 HSMRIS---------VPRHYSSEEPPPPGVTLETNGYETHLNVTNYDYSRRVFGATLDSI 196
HS R S +P Y ++EPPPPGV+ N + +YSRRV G+ LDSI
Sbjct: 115 HSERFSSQLISPPSPLPLDY-TQEPPPPGVS----------NGASLEYSRRVLGSALDSI 163
Query: 197 SRSRSGHY 204
+ SR Y
Sbjct: 164 NHSRPRRY 171
>gi|30681329|ref|NP_192749.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|26453246|dbj|BAC43696.1| unknown protein [Arabidopsis thaliana]
gi|28372886|gb|AAO39925.1| At4g10100 [Arabidopsis thaliana]
gi|332657441|gb|AEE82841.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 173
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/191 (52%), Positives = 127/191 (66%), Gaps = 27/191 (14%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
MSG SN C VYIGN+DE+V++RVLYDI+IQAGRV+DL+IPRDKETDKPKGFAF EYE+E
Sbjct: 1 MSGTSN--CTVYIGNVDERVSDRVLYDIMIQAGRVIDLHIPRDKETDKPKGFAFAEYETE 58
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGME 142
EI YA+KLFSG+V+LYNRTL+FA+SGQDK NS+ S ++R + +
Sbjct: 59 EIADYAVKLFSGLVSLYNRTLKFAISGQDKLQSNSAN-----SGHRARPQSLAFEHSDRA 113
Query: 143 ISHHSMRIS---------VPRHYSSEEPPPPGVTLETNGYETHLNVTNYDYSRRVFGATL 193
HH R S +P Y ++EPPPPGV+ N + +YSRRV G+ L
Sbjct: 114 AYHHLERFSSQLISPPSPLPLDY-TQEPPPPGVS----------NGASLEYSRRVLGSAL 162
Query: 194 DSISRSRSGHY 204
DSI+ SR Y
Sbjct: 163 DSINHSRPRRY 173
>gi|359474604|ref|XP_002274629.2| PREDICTED: uncharacterized protein LOC100252755 [Vitis vinifera]
gi|147777236|emb|CAN76637.1| hypothetical protein VITISV_010659 [Vitis vinifera]
gi|296083375|emb|CBI23264.3| unnamed protein product [Vitis vinifera]
Length = 183
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 118/175 (67%), Gaps = 16/175 (9%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
++ SGC VYIGNLDE+V+ERVLYDILIQ GRVVDLYIPRDKET++PKG+AF EYE+EEI
Sbjct: 2 STKSGCAVYIGNLDERVSERVLYDILIQVGRVVDLYIPRDKETERPKGYAFAEYETEEIA 61
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISH 145
YA+KLFSG+VTLYNRTL+FA+SGQDK S TP +P N ME S
Sbjct: 62 EYAVKLFSGLVTLYNRTLKFAISGQDK---PSPAAITPRHH---------VPYNNMESSQ 109
Query: 146 HSMRISVPRHYSSE----EPPPPGVTLETNGYETHLNVTNYDYSRRVFGATLDSI 196
HSM + P S+ V + N + + NYDYSRRVFGATLD+I
Sbjct: 110 HSMGLKTPCRLSAHPVNNAQASSDVLHQPNRNSSQHDGNNYDYSRRVFGATLDNI 164
>gi|449447747|ref|XP_004141629.1| PREDICTED: splicing regulator RBM11-like [Cucumis sativus]
Length = 195
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/187 (53%), Positives = 130/187 (69%), Gaps = 11/187 (5%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
MSG SN+ C VY+GNLDE+V++RVLYDILIQAGRVVDL+IPRDK+T KPKGFAF YESE
Sbjct: 1 MSGGSNA-CTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKDTGKPKGFAFAVYESE 59
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDKNA-QNSSMTTTPLSSRKSRSDPVPMPVNGM 141
EI +YA+KLFSG+V+L++R L+FA+SGQDK++ NS++T++ S KSRS
Sbjct: 60 EIANYAVKLFSGLVSLHSRILKFAVSGQDKSSPTNSAITSSSNVSHKSRSHGYS-----N 114
Query: 142 EISHHSMRISVP-RHYSSEEPPP---PGVTLETNGYETHLNVTNYDYSRRVFGATLDSIS 197
EIS +S +S R Y G+ + NGY +HL+ N YS+R GATLDS
Sbjct: 115 EISQYSNHLSTSCRTYPENHVQALLYHGLVNQYNGYGSHLDNYNKKYSQRYHGATLDSFK 174
Query: 198 RSRSGHY 204
+ +S Y
Sbjct: 175 QPKSRCY 181
>gi|449447555|ref|XP_004141533.1| PREDICTED: spliceosome-associated protein 49-like [Cucumis sativus]
Length = 168
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 97/185 (52%), Positives = 124/185 (67%), Gaps = 25/185 (13%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
MSG SN GC +YIGNLDEKV++RVLYDILIQAGRVVDL+IPRDKE+ KPKGFAF EYESE
Sbjct: 1 MSGRSN-GCTIYIGNLDEKVSDRVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYESE 59
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGME 142
EI +YA+KLFSG+V L+ RTL+FA+SGQDK + S+ T+ SSR P N +E
Sbjct: 60 EIANYAVKLFSGLVNLHKRTLKFAVSGQDKPSPGSNAITS--SSRFPT-----YPENHLE 112
Query: 143 ISHHSMRISVPRHYSSEEPPPPGVTLETNGYETHLNVTNYDYSRRVFGATLDSISRSRSG 202
+ PG+ + NGY +HL+ N +YS+R G LDS ++ +S
Sbjct: 113 ALLN-----------------PGLVNQFNGYGSHLDNYNKEYSQRYSGTNLDSFNQPKSR 155
Query: 203 HYNSS 207
++SS
Sbjct: 156 RHDSS 160
>gi|115464015|ref|NP_001055607.1| Os05g0427300 [Oryza sativa Japonica Group]
gi|113579158|dbj|BAF17521.1| Os05g0427300 [Oryza sativa Japonica Group]
gi|215692737|dbj|BAG88157.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737792|dbj|BAG96922.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765638|dbj|BAG87335.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767778|dbj|BAH00007.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222631662|gb|EEE63794.1| hypothetical protein OsJ_18618 [Oryza sativa Japonica Group]
Length = 187
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 120/182 (65%), Gaps = 21/182 (11%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N GC V+IGNLDEKV ERVLY+ILIQ GRVVDL+IPRDKET++ KG+AF EYE+EEI Y
Sbjct: 4 NPGCTVFIGNLDEKVPERVLYEILIQVGRVVDLHIPRDKETNRSKGYAFAEYETEEIAQY 63
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGME----- 142
A+KLFSG+V L+NRTLRFA+SGQDK + N ++ TP K P P P M
Sbjct: 64 AVKLFSGLVRLHNRTLRFAISGQDKQSSNGNIPVTP----KVNPIPPPKPAQLMRSSDTP 119
Query: 143 ISHHSM---RIS--VPRH-YSSEEPPPPGVTLETNGYETHLNVTNYDYSRRVFGATLDSI 196
S H++ RI+ P H YS+ P G++ L+ Y+YSRRVFG+ L+ +
Sbjct: 120 ASQHTVVNGRIAGISPNHSYSAHSEAPSGIS------SRGLSNGTYEYSRRVFGSVLNDV 173
Query: 197 SR 198
SR
Sbjct: 174 SR 175
>gi|218196836|gb|EEC79263.1| hypothetical protein OsI_20043 [Oryza sativa Indica Group]
Length = 187
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 120/182 (65%), Gaps = 21/182 (11%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N GC V+IGNLDEKV ERVLY+ILIQ GRVVDL+IPRDKET++ KG+AF EYE+EEI Y
Sbjct: 4 NPGCTVFIGNLDEKVPERVLYEILIQVGRVVDLHIPRDKETNRSKGYAFAEYETEEIAQY 63
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGME----- 142
A+KLFSG+V L+NRTLRFA+SGQDK + N ++ TP K P P P M
Sbjct: 64 AVKLFSGLVRLHNRTLRFAISGQDKQSSNGNIPVTP----KLNPIPPPKPAQLMRSSDTP 119
Query: 143 ISHHSM---RIS--VPRH-YSSEEPPPPGVTLETNGYETHLNVTNYDYSRRVFGATLDSI 196
S H++ RI+ P H YS+ P G++ L+ Y+YSRRVFG+ L+ +
Sbjct: 120 ASQHTVVNGRIAGISPNHSYSAHSEAPSGIS------SRGLSNGTYEYSRRVFGSVLNDV 173
Query: 197 SR 198
SR
Sbjct: 174 SR 175
>gi|195605172|gb|ACG24416.1| RNA recognition motif-containing protein [Zea mays]
gi|223944379|gb|ACN26273.1| unknown [Zea mays]
gi|413945426|gb|AFW78075.1| RNA recognition motif protein-containing protein [Zea mays]
Length = 190
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/193 (48%), Positives = 120/193 (62%), Gaps = 40/193 (20%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N GC V+IGNLD+KV ERVLY+ILIQ GRVVDL+IPRDKET +PKG+AF EYE+EEI Y
Sbjct: 4 NPGCTVFIGNLDDKVPERVLYEILIQVGRVVDLHIPRDKETSRPKGYAFAEYETEEIAQY 63
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISHHS 147
A+KLFSG+V L+N+TLRFA+SGQDK + N ++ TP R + VP P H
Sbjct: 64 AVKLFSGLVRLHNKTLRFAISGQDKPSLNGNIPVTP------RLNSVPQPK-----PHQP 112
Query: 148 MRIS---VPRHYSSEE-------PPPPGVTLETNGYETH------------LNVTNYDYS 185
MR S +P+H + PP + Y+TH L+ Y+YS
Sbjct: 113 MRSSDTPLPQHAAVNGRNAGYGIPP-------NHSYDTHTQALSSGLPNRGLSNGTYEYS 165
Query: 186 RRVFGATLDSISR 198
RRVFG+ L+ +SR
Sbjct: 166 RRVFGSVLNDVSR 178
>gi|293336865|ref|NP_001170769.1| uncharacterized protein LOC100384862 [Zea mays]
gi|238007432|gb|ACR34751.1| unknown [Zea mays]
Length = 191
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/187 (50%), Positives = 120/187 (64%), Gaps = 27/187 (14%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N GC V+IGNLD+KV ERVLY+ILIQ GRVVDL+IPRDKET +PKG+AF EYE+EEI Y
Sbjct: 4 NPGCTVFIGNLDDKVPERVLYEILIQVGRVVDLHIPRDKETSRPKGYAFAEYETEEIAQY 63
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISHHS 147
AIKLFSG+V L N+TLRFA+SGQDK + N ++ P S P P P H
Sbjct: 64 AIKLFSGLVRLRNKTLRFAISGQDKPSLNGNIPVIP----SLNSVPQPKP------PHQH 113
Query: 148 MRIS---VPRHYS-SEEPPPPGVTLETNGYETH------------LNVTNYDYSRRVFGA 191
MR S +P+H + S G++ + + Y+TH L+ Y+YSRRVFG+
Sbjct: 114 MRSSDTPLPQHTAVSGRSAGYGIS-QNHSYDTHTQAPSSGLPSRGLSNGTYEYSRRVFGS 172
Query: 192 TLDSISR 198
L+ +SR
Sbjct: 173 VLNDVSR 179
>gi|195640602|gb|ACG39769.1| RNA recognition motif-containing protein [Zea mays]
Length = 190
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 120/187 (64%), Gaps = 28/187 (14%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N GC V+IGNLD+KV ERVLY+ILIQ GRVVDL+IPRDKET +PKG+AF EYE+EEI Y
Sbjct: 4 NPGCTVFIGNLDDKVPERVLYEILIQVGRVVDLHIPRDKETSRPKGYAFAEYETEEIAQY 63
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISHHS 147
A+KLFSG+ L+N+TLRFA+SGQDK + N ++ TP R + VP P H
Sbjct: 64 AVKLFSGLFRLHNKTLRFAISGQDKPSLNGNIPVTP------RLNSVPQPK-----PHQP 112
Query: 148 MRIS---VPRHYSSEEPPPPGVTLETN-GYETH------------LNVTNYDYSRRVFGA 191
MR S +P+H ++ G + N Y+TH L+ Y+YSRRVFG+
Sbjct: 113 MRSSDTPLPQH-TAVNGRSAGYGIPPNHSYDTHTQALSSGLPNRGLSNGTYEYSRRVFGS 171
Query: 192 TLDSISR 198
L+ +SR
Sbjct: 172 VLNDVSR 178
>gi|46391132|gb|AAS90659.1| putative galactosyltransferase [Oryza sativa Japonica Group]
Length = 534
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 71/110 (64%), Positives = 88/110 (80%), Gaps = 6/110 (5%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N GC V+IGNLDEKV ERVLY+ILIQ GRVVDL+IPRDKET++ KG+AF EYE+EEI Y
Sbjct: 4 NPGCTVFIGNLDEKVPERVLYEILIQVGRVVDLHIPRDKETNRSKGYAFAEYETEEIAQY 63
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMP 137
A+KLFSG+V L+NRTLRFA+SGQDK + N ++ TP + +P+P P
Sbjct: 64 AVKLFSGLVRLHNRTLRFAISGQDKQSSNGNIPVTP------KVNPIPPP 107
>gi|215704644|dbj|BAG94272.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 161
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 71/110 (64%), Positives = 88/110 (80%), Gaps = 6/110 (5%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N GC V+IGNLDEKV ERVLY+ILIQ GRVVDL+IPRDKET++ KG+AF EYE+EEI Y
Sbjct: 4 NPGCTVFIGNLDEKVPERVLYEILIQVGRVVDLHIPRDKETNRSKGYAFAEYETEEIAQY 63
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMP 137
A+KLFSG+V L+NRTLRFA+SGQDK + N ++ TP + +P+P P
Sbjct: 64 AVKLFSGLVRLHNRTLRFAISGQDKQSSNGNIPVTP------KVNPIPPP 107
>gi|194696904|gb|ACF82536.1| unknown [Zea mays]
gi|195620946|gb|ACG32303.1| hypothetical protein [Zea mays]
gi|413945425|gb|AFW78074.1| hypothetical protein ZEAMMB73_201613 [Zea mays]
Length = 176
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/133 (57%), Positives = 96/133 (72%), Gaps = 14/133 (10%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N GC V+IGNLD+KV ERVLY+ILIQ GRVVDL+IPRDKET +PKG+AF EYE+EEI Y
Sbjct: 4 NPGCTVFIGNLDDKVPERVLYEILIQVGRVVDLHIPRDKETSRPKGYAFAEYETEEIAQY 63
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISHHS 147
A+KLFSG+V L+N+TLRFA+SGQDK + N ++ TP + S P P P H
Sbjct: 64 AVKLFSGLVRLHNKTLRFAISGQDKPSLNGNIPVTP----RLNSVPQPKP-------HQP 112
Query: 148 MRIS---VPRHYS 157
MR S +P+H +
Sbjct: 113 MRSSDTPLPQHAA 125
>gi|357133580|ref|XP_003568402.1| PREDICTED: probable beta-1,3-galactosyltransferase 8-like
[Brachypodium distachyon]
Length = 528
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 68/109 (62%), Positives = 88/109 (80%), Gaps = 6/109 (5%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N GC V+IGNLDEKV ERVLY+IL+Q G VVDL+IPRDKET++ +G+AF EYE+EEI Y
Sbjct: 4 NPGCAVFIGNLDEKVPERVLYEILVQVGHVVDLHIPRDKETNRGRGYAFAEYETEEIAQY 63
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPM 136
A+KLFSG+V L+NRTLRFA+SGQDK + N++M TP + +P+P+
Sbjct: 64 AVKLFSGLVRLHNRTLRFAISGQDKPSSNANMPVTP------KMNPIPL 106
>gi|449482315|ref|XP_004156245.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus]
Length = 187
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 87/99 (87%), Gaps = 1/99 (1%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
MSG SN+ C VY+GNLDE+V++RVLYDILIQAGRVVDL+IPRDK+T KPKGFAF YESE
Sbjct: 1 MSGGSNA-CTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKDTGKPKGFAFAVYESE 59
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTT 121
EI +YA+KLFSG+V+L++R L+FA+SGQDK++ +S T
Sbjct: 60 EIANYAVKLFSGLVSLHSRILKFAVSGQDKSSPTNSAIT 98
>gi|125572836|gb|EAZ14351.1| hypothetical protein OsJ_04272 [Oryza sativa Japonica Group]
Length = 421
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 89/129 (68%), Gaps = 10/129 (7%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
VYIGNLDEKV ER+LY+ILIQ GRVVDL IPRDKET PKG+AF EYE+EEI YA++L
Sbjct: 8 TVYIGNLDEKVTERILYEILIQPGRVVDLCIPRDKETSCPKGYAFAEYETEEIAQYAVQL 67
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISHHSMRI- 150
FSG+V LY +TL+FA+SGQDK + N + P + +PVP+P + H M +
Sbjct: 68 FSGLVRLYGKTLKFAISGQDKPSSNGNNPVMP------KLNPVPLPKQPQFVHHSDMHVL 121
Query: 151 ---SVPRHY 156
+ P HY
Sbjct: 122 HTPADPMHY 130
>gi|4538975|emb|CAB39763.1| putative protein [Arabidopsis thaliana]
gi|7267707|emb|CAB78134.1| putative protein [Arabidopsis thaliana]
Length = 147
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 51 LIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLRFALSGQ 110
+IQAGRV+DL+IPRDKETDKPKGFAF EYE+EEI YA+KLFSG+V+LYNRTL+FA+SGQ
Sbjct: 1 MIQAGRVIDLHIPRDKETDKPKGFAFAEYETEEIADYAVKLFSGLVSLYNRTLKFAISGQ 60
Query: 111 DKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISHHSMRIS---------VPRHYSSEEP 161
DK NS+ S ++R + + HH R S +P Y ++EP
Sbjct: 61 DKLQSNSAN-----SGHRARPQSLAFEHSDRAAYHHLERFSSQLISPPSPLPLDY-TQEP 114
Query: 162 PPPGVTLETNGYETHLNVTNYDYSRRVFGATLDSISRSRSGHY 204
PPPGV+ N + +YSRRV G+ LDSI+ SR Y
Sbjct: 115 PPPGVS----------NGASLEYSRRVLGSALDSINHSRPRRY 147
>gi|56784854|dbj|BAD82094.1| galactosyltransferase-like protein [Oryza sativa Japonica Group]
Length = 204
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/118 (57%), Positives = 85/118 (72%), Gaps = 6/118 (5%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
VYIGNLDEKV ER+LY+ILIQ GRVVDL IPRDKET PKG+AF EYE+EEI YA++LF
Sbjct: 9 VYIGNLDEKVTERILYEILIQPGRVVDLCIPRDKETSCPKGYAFAEYETEEIAQYAVQLF 68
Query: 93 SGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISHHSMRI 150
SG+V LY +TL+FA+SGQDK + N + P + +PVP+P + H M +
Sbjct: 69 SGLVRLYGKTLKFAISGQDKPSSNGNNPVMP------KLNPVPLPKQPQFVHHSDMHV 120
>gi|326498389|dbj|BAJ98622.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510879|dbj|BAJ91787.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 205
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 6/110 (5%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N C+VY+GNLDE V ERVLY+ILIQAG VVDL+IP DKET +PKGFAF EYE+E I Y
Sbjct: 4 NPACSVYVGNLDENVPERVLYEILIQAGHVVDLHIPCDKETGRPKGFAFAEYETEAIAQY 63
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMP 137
A++LFSG+V L +TL+FALSGQDK + N ++ P + +P+P+P
Sbjct: 64 AVRLFSGLVRLNGKTLKFALSGQDKPSSNGNIPVMP------KLNPIPLP 107
>gi|357126157|ref|XP_003564755.1| PREDICTED: uncharacterized protein LOC100841208 [Brachypodium
distachyon]
Length = 205
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 108/189 (57%), Gaps = 24/189 (12%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
M+ N N VY+GNLDEKV+ERVLY+ILIQAG VVDL++P DKET +PKGFAFVEYE+E
Sbjct: 1 MARNPNRA--VYVGNLDEKVSERVLYEILIQAGHVVDLHVPHDKETGRPKGFAFVEYETE 58
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGME 142
EI HYA+ LFSG+V L +TL+FA+SGQDK + N + P + P+ +P
Sbjct: 59 EIAHYAVDLFSGLVRLNGKTLKFAMSGQDKPSSNGTNPVMP------KLIPIALPKQPQF 112
Query: 143 ISHHSMRISVPRHYSSEEPPPPGVTLETNGY--------------ETHLNVTN--YDYSR 186
+ M + Y P N Y H +T+ YDYSR
Sbjct: 113 VHCSDMPVLHKPAYPVVNGRIPDYGFSHNYYPYDAYPQALPARPVHDHRQLTHGMYDYSR 172
Query: 187 RVFGATLDS 195
VFG+ L++
Sbjct: 173 SVFGSVLNA 181
>gi|125528572|gb|EAY76686.1| hypothetical protein OsI_04641 [Oryza sativa Indica Group]
Length = 214
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 84/118 (71%), Gaps = 6/118 (5%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
VYIGNLDEKV ER+LY+ILIQ GRVVDL IPRDKET KG+AF EYE+EEI YA++LF
Sbjct: 9 VYIGNLDEKVTERILYEILIQPGRVVDLCIPRDKETSCLKGYAFAEYETEEIAQYAVQLF 68
Query: 93 SGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISHHSMRI 150
SG+V LY +TL+FA+SGQDK + N + P + +PVP+P + H M +
Sbjct: 69 SGLVRLYGKTLKFAISGQDKPSSNGNNPVMP------KLNPVPLPKQPQFVHHSDMHV 120
>gi|297598038|ref|NP_001044970.2| Os01g0876500 [Oryza sativa Japonica Group]
gi|255673918|dbj|BAF06884.2| Os01g0876500 [Oryza sativa Japonica Group]
Length = 100
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/84 (72%), Positives = 72/84 (85%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
VYIGNLDEKV ER+LY+ILIQ GRVVDL IPRDKET PKG+AF EYE+EEI YA++LF
Sbjct: 9 VYIGNLDEKVTERILYEILIQPGRVVDLCIPRDKETSCPKGYAFAEYETEEIAQYAVQLF 68
Query: 93 SGIVTLYNRTLRFALSGQDKNAQN 116
SG+V LY +TL+FA+SGQDK + N
Sbjct: 69 SGLVRLYGKTLKFAISGQDKPSSN 92
>gi|116789097|gb|ABK25115.1| unknown [Picea sitchensis]
gi|224284110|gb|ACN39792.1| unknown [Picea sitchensis]
gi|224285790|gb|ACN40610.1| unknown [Picea sitchensis]
gi|294464481|gb|ADE77751.1| unknown [Picea sitchensis]
Length = 206
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 89/116 (76%), Gaps = 6/116 (5%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
M GN S ++IGNLD++V+ERVLY+++IQAG +VDLYIPRDKET++ KG+AF EYE+E
Sbjct: 1 MPGNPLS--TLFIGNLDDRVDERVLYEVMIQAGPLVDLYIPRDKETNRHKGYAFAEYETE 58
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPV 138
E+ YAIKLFSG+V L+N+ +RFA+SGQDK+ Q T +S+ S+ P+ P+
Sbjct: 59 EVAQYAIKLFSGLVCLHNKFVRFAISGQDKSPQ----TQIAVSASPSQRPPIQSPI 110
>gi|413945429|gb|AFW78078.1| hypothetical protein ZEAMMB73_201613, partial [Zea mays]
gi|413945430|gb|AFW78079.1| hypothetical protein ZEAMMB73_201613, partial [Zea mays]
Length = 147
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 59/80 (73%), Positives = 71/80 (88%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N GC V+IGNLD+KV ERVLY+ILIQ GRVVDL+IPRDKET +PKG+AF EYE+EEI Y
Sbjct: 59 NPGCTVFIGNLDDKVPERVLYEILIQVGRVVDLHIPRDKETSRPKGYAFAEYETEEIAQY 118
Query: 88 AIKLFSGIVTLYNRTLRFAL 107
A+KLFSG+V L+N+TLRFA+
Sbjct: 119 AVKLFSGLVRLHNKTLRFAV 138
>gi|212721594|ref|NP_001131930.1| uncharacterized protein LOC100193321 [Zea mays]
gi|194692948|gb|ACF80558.1| unknown [Zea mays]
Length = 92
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/80 (73%), Positives = 71/80 (88%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N GC V+IGNLD+KV ERVLY+ILIQ GRVVDL+IPRDKET +PKG+AF EYE+EEI Y
Sbjct: 4 NPGCTVFIGNLDDKVPERVLYEILIQVGRVVDLHIPRDKETSRPKGYAFAEYETEEIAQY 63
Query: 88 AIKLFSGIVTLYNRTLRFAL 107
A+KLFSG+V L+N+TLRFA+
Sbjct: 64 AVKLFSGLVRLHNKTLRFAV 83
>gi|242055165|ref|XP_002456728.1| hypothetical protein SORBIDRAFT_03g041520 [Sorghum bicolor]
gi|241928703|gb|EES01848.1| hypothetical protein SORBIDRAFT_03g041520 [Sorghum bicolor]
Length = 442
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 86/118 (72%), Gaps = 8/118 (6%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N GC V+IGNLDEK++ERVLY+ILIQAG VVDL++P DKE++ KG+AF EYE+EEI Y
Sbjct: 4 NPGCTVFIGNLDEKLSERVLYEILIQAGHVVDLHVPSDKESNSRKGYAFAEYETEEIAQY 63
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNA--QNSSMTTTPLSSRKS------RSDPVPMP 137
A++LFSG+V + +TL+F ++G DK + N+S+ P+ S + +P+P+P
Sbjct: 64 AVRLFSGLVRINGKTLKFVIAGHDKPSSNDNNSVMLNPVPSSNGNNPVMPKLNPIPLP 121
>gi|413951767|gb|AFW84416.1| hypothetical protein ZEAMMB73_668553 [Zea mays]
Length = 167
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 88/127 (69%), Gaps = 8/127 (6%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V+IGNLDEKV+ER+LY+ILIQAG VVDL++P DKE++ KG+AFVEYE+EEI YA+KLF
Sbjct: 9 VFIGNLDEKVSERILYEILIQAGHVVDLHVPSDKESNSLKGYAFVEYETEEIAQYAVKLF 68
Query: 93 SGIVTLYNRTLRFALSGQDKNAQ--NSSMTTTPLSSRKS------RSDPVPMPVNGMEIS 144
SG+V + +TL+F ++G DK + N+S+ P+ S + +P+P+P +
Sbjct: 69 SGLVRISGKTLKFMIAGYDKPSSNVNTSVMLNPVPSSNGNNPVTPKLNPIPLPKQTQIMC 128
Query: 145 HHSMRIS 151
M +S
Sbjct: 129 CSDMPVS 135
>gi|413951768|gb|AFW84417.1| hypothetical protein ZEAMMB73_668553 [Zea mays]
Length = 114
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 77/96 (80%), Gaps = 2/96 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V+IGNLDEKV+ER+LY+ILIQAG VVDL++P DKE++ KG+AFVEYE+EEI YA+KLF
Sbjct: 9 VFIGNLDEKVSERILYEILIQAGHVVDLHVPSDKESNSLKGYAFVEYETEEIAQYAVKLF 68
Query: 93 SGIVTLYNRTLRFALSGQDKNAQ--NSSMTTTPLSS 126
SG+V + +TL+F ++G DK + N+S+ P+ S
Sbjct: 69 SGLVRISGKTLKFMIAGYDKPSSNVNTSVMLNPVPS 104
>gi|414879437|tpg|DAA56568.1| TPA: hypothetical protein ZEAMMB73_352812 [Zea mays]
Length = 114
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 73/94 (77%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N G V+IGNLDEKV+ERVLY+ILIQAG VV L++P +KE++ KG+AF EYE+E+I Y
Sbjct: 4 NPGRTVFIGNLDEKVSERVLYEILIQAGHVVGLHVPSNKESNSRKGYAFAEYETEDIAQY 63
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTT 121
A++LFSG+V + +TL+F ++G DK + N + +
Sbjct: 64 AVRLFSGLVRINGKTLKFVIAGHDKPSSNDNKSV 97
>gi|302800269|ref|XP_002981892.1| hypothetical protein SELMODRAFT_421400 [Selaginella moellendorffii]
gi|300150334|gb|EFJ16985.1| hypothetical protein SELMODRAFT_421400 [Selaginella moellendorffii]
Length = 431
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 67/85 (78%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+ NLD++V+ERVLYDI++QAG +V++YIPRDKET + +G+ F EYESEE Y
Sbjct: 5 NVDATLYVSNLDDRVDERVLYDIMVQAGPLVEVYIPRDKETKRHRGYGFAEYESEESASY 64
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A++LFSG+VTL+NR + FA SG K
Sbjct: 65 ALRLFSGLVTLHNRPVNFAFSGGAK 89
>gi|302808636|ref|XP_002986012.1| hypothetical protein SELMODRAFT_425016 [Selaginella moellendorffii]
gi|300146160|gb|EFJ12831.1| hypothetical protein SELMODRAFT_425016 [Selaginella moellendorffii]
Length = 442
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 67/85 (78%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+ NLD++V+ERVLYDI++QAG +V++YIPRDKET + +G+ F EYESEE Y
Sbjct: 5 NVDATLYVSNLDDRVDERVLYDIMVQAGPLVEVYIPRDKETKRHRGYGFAEYESEESASY 64
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A++LFSG+VTL+NR + FA SG K
Sbjct: 65 ALRLFSGLVTLHNRPVNFAFSGGAK 89
>gi|226508654|ref|NP_001151528.1| LOC100285162 [Zea mays]
gi|195647430|gb|ACG43183.1| RNA recognition motif-containing protein [Zea mays]
Length = 110
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 65/80 (81%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N G V+IGNLDEKV+ERVLY+ILIQAG VV L++P +KE++ KG+AF EYE+E+I Y
Sbjct: 4 NPGRTVFIGNLDEKVSERVLYEILIQAGHVVGLHVPSNKESNSHKGYAFAEYETEDIAQY 63
Query: 88 AIKLFSGIVTLYNRTLRFAL 107
A++LFSG+V + +TL+F +
Sbjct: 64 AVRLFSGLVRINGKTLKFVV 83
>gi|357460829|ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355489744|gb|AES70947.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 379
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Query: 24 SGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
S N Y+GNLD +++E +L+++ +QAG VV++Y+P+D+ T++ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEE 77
Query: 84 IGHYAIKLFSGIVTLYNRTLRFALSGQDKNA 114
YAIK+ + ++ LY + +R + QDK +
Sbjct: 78 DADYAIKVLN-MIKLYGKPIRVNKASQDKKS 107
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD V+E++LYD G +V + I RD +T +GF F+ Y+S E A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSA 170
Query: 89 IKLFSGIVTLYNRTL 103
I+ +G L NR +
Sbjct: 171 IEAMNGQY-LCNRQI 184
>gi|338762832|gb|AEI98619.1| hypothetical protein 111O18.6 [Coffea canephora]
Length = 368
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 24 SGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
S N Y+GNLD +V+E +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNSHQGYGFVEFRSEE 77
Query: 84 IGHYAIKLFSGIVTLYNRTLRFALSGQDK 112
YAIK+ + ++ LY + +R + QDK
Sbjct: 78 DADYAIKVLN-MIKLYGKPIRVNKASQDK 105
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD V+E++LYD G +V + I RD ET +GF F+ Y+S E A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDAA 170
Query: 89 IKLFSG 94
I+ +G
Sbjct: 171 IEAMNG 176
>gi|356532261|ref|XP_003534692.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
Length = 365
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N Y+GNLD +++E +L+++ +QAG VV++Y+P+D+ T++ +G+ FVE+ SEE Y
Sbjct: 22 NQDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADY 81
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNA 114
AIK+ + ++ LY + +R + QDK +
Sbjct: 82 AIKVLN-MIKLYGKPIRVNKASQDKKS 107
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD V+E++LYD G +V + I RD +T +GF F+ Y+S E A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSA 170
Query: 89 IKLFSGIVTLYNRTL 103
I+ +G L NR +
Sbjct: 171 IEAMNGQY-LCNRQI 184
>gi|356544204|ref|XP_003540544.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
Length = 364
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 24 SGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
+ N Y+GNLD ++ E +L+++ +QAG VV++Y+P+D+ T++ +G+ FVE+ SEE
Sbjct: 18 AAERNQDATAYVGNLDPQICEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEE 77
Query: 84 IGHYAIKLFSGIVTLYNRTLRFALSGQDKNA 114
YAIK+ + ++ LY + +R + QDK +
Sbjct: 78 DADYAIKVLN-MIKLYGKPIRVNKASQDKKS 107
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD V+E++LYD G +V + I RD ET +GF F+ Y+S E A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDSA 170
Query: 89 IKLFSGIVTLYNRTL 103
I+ +G L NR +
Sbjct: 171 IEAMNGQY-LCNRQI 184
>gi|308081546|ref|NP_001183096.1| uncharacterized protein LOC100501457 [Zea mays]
gi|238009292|gb|ACR35681.1| unknown [Zea mays]
gi|414871228|tpg|DAA49785.1| TPA: hypothetical protein ZEAMMB73_160597 [Zea mays]
Length = 359
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 24 SGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
S N Y+GNLD +V+E +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
Query: 84 IGHYAIKLFSGIVTLYNRTLRFALSGQDKNA 114
YAIK+ + ++ LY + +R + QDK +
Sbjct: 78 DADYAIKILN-MIKLYGKPIRVNKASQDKKS 107
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD V+E++LYD G +V + I RD ET +GF FV YES E A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQA 170
Query: 89 IK 90
I+
Sbjct: 171 IE 172
>gi|222612944|gb|EEE51076.1| hypothetical protein OsJ_31773 [Oryza sativa Japonica Group]
Length = 391
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 24 SGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
S N Y+GNLD +V+E +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
Query: 84 IGHYAIKLFSGIVTLYNRTLRFALSGQDKNA 114
YAIK+ + ++ LY + +R + QDK +
Sbjct: 78 DADYAIKILN-MIKLYGKPIRVNKASQDKKS 107
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 58/132 (43%), Gaps = 25/132 (18%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD V+E++LYD G +V + I RD ET +GF FV Y+S E A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQA 170
Query: 89 IKLFSGIVTLYNRTLRFALS-----------------------GQDKNAQNSSMTTTPLS 125
I+ + L NR + + + G KN ++ + P +
Sbjct: 171 IEAMNN-QHLCNRPITVSYAYKKDTKGERHGTPAERLLAANNPGSQKNRPHTMFASGPPT 229
Query: 126 SRKSRSDPVPMP 137
+ PVP P
Sbjct: 230 QGLANGAPVPRP 241
>gi|225430808|ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vitis vinifera]
Length = 373
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 24 SGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
S N Y+GNLD +V E +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
Query: 84 IGHYAIKLFSGIVTLYNRTLRFALSGQDKNA 114
YAIK+ + ++ LY + +R + QDK +
Sbjct: 78 DADYAIKVLN-MIKLYGKPIRVNKASQDKKS 107
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N+++GNLD V+E++LYD G +V + I RD +T +GF FV Y+S E A
Sbjct: 111 GANLFVGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAA 170
Query: 89 IKLFSG 94
I+ +G
Sbjct: 171 IEAMNG 176
>gi|242039481|ref|XP_002467135.1| hypothetical protein SORBIDRAFT_01g020190 [Sorghum bicolor]
gi|241920989|gb|EER94133.1| hypothetical protein SORBIDRAFT_01g020190 [Sorghum bicolor]
Length = 355
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 24 SGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
S N Y+GNLD +V+E +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
Query: 84 IGHYAIKLFSGIVTLYNRTLRFALSGQDKNA 114
YAIK+ + ++ LY + +R + QDK +
Sbjct: 78 DADYAIKILN-MIKLYGKPIRVNKASQDKKS 107
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD V+E++LYD G +V + I RD ET +GF FV Y+S E A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQA 170
Query: 89 IK 90
I+
Sbjct: 171 IE 172
>gi|115482332|ref|NP_001064759.1| Os10g0457000 [Oryza sativa Japonica Group]
gi|31432465|gb|AAP54095.1| Splicing factor 3B subunit 4, putative, expressed [Oryza sativa
Japonica Group]
gi|113639368|dbj|BAF26673.1| Os10g0457000 [Oryza sativa Japonica Group]
gi|215737182|dbj|BAG96111.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184664|gb|EEC67091.1| hypothetical protein OsI_33883 [Oryza sativa Indica Group]
Length = 355
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 24 SGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
S N Y+GNLD +V+E +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
Query: 84 IGHYAIKLFSGIVTLYNRTLRFALSGQDKNA 114
YAIK+ + ++ LY + +R + QDK +
Sbjct: 78 DADYAIKILN-MIKLYGKPIRVNKASQDKKS 107
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 58/132 (43%), Gaps = 25/132 (18%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD V+E++LYD G +V + I RD ET +GF FV Y+S E A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQA 170
Query: 89 IKLFSGIVTLYNRTLRFALS-----------------------GQDKNAQNSSMTTTPLS 125
I+ + L NR + + + G KN ++ + P +
Sbjct: 171 IEAMNN-QHLCNRPITVSYAYKKDTKGERHGTPAERLLAANNPGSQKNRPHTMFASGPPT 229
Query: 126 SRKSRSDPVPMP 137
+ PVP P
Sbjct: 230 QGLANGAPVPRP 241
>gi|325186713|emb|CCA21261.1| RNA polymerase Ispecific transcription initiation factor rrn3
putative [Albugo laibachii Nc14]
Length = 988
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +YIGNLD+KV+E +L+++++QAG VV++++PRDK T + + FVE+ +EE Y
Sbjct: 714 NQDATIYIGNLDDKVSEELLWELMLQAGSVVNVHMPRDKVTTNHQNYGFVEFRTEECAEY 773
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
AIK+ + ++ +Y + +R + QDK
Sbjct: 774 AIKIMN-MIQVYGKPIRVKKASQDK 797
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD +V+E++LYD G +++ I RD +T +GF F+ +++ E A
Sbjct: 803 GANLFIGNLDPEVDEKLLYDTFSAFGGIIETPKIMRDPDTKHSRGFGFISFDAFEASDLA 862
Query: 89 IKLFSG 94
I+ +
Sbjct: 863 IECMNA 868
>gi|212274429|ref|NP_001130902.1| uncharacterized protein LOC100192006 [Zea mays]
gi|194690404|gb|ACF79286.1| unknown [Zea mays]
gi|413934109|gb|AFW68660.1| hypothetical protein ZEAMMB73_687460 [Zea mays]
Length = 357
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 24 SGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
S N Y+GNLD +V+E +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
Query: 84 IGHYAIKLFSGIVTLYNRTLRFALSGQDKNA 114
YAIK + ++ LY + +R + QDK +
Sbjct: 78 DADYAIKTLN-MIKLYGKPIRVNKASQDKKS 107
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD V+E++LYD G +V + I RD ET +GF FV YES E A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQA 170
Query: 89 IK 90
I+
Sbjct: 171 IE 172
>gi|255550690|ref|XP_002516394.1| spliceosome associated protein, putative [Ricinus communis]
gi|223544492|gb|EEF46011.1| spliceosome associated protein, putative [Ricinus communis]
Length = 376
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 24 SGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
S N Y+GNLD +V+E +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
Query: 84 IGHYAIKLFSGIVTLYNRTLRFALSGQDKNA 114
YAIK+ + ++ L+ + +R + QDK +
Sbjct: 78 DADYAIKIMN-MIKLFGKPIRVNKASQDKKS 107
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD V+E++L+D G +V + I RD ET +GF F+ Y+S + A
Sbjct: 111 GANLFIGNLDPDVDEKLLHDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFDASDAA 170
Query: 89 IKLFSGIVTLYNRTL 103
I+ +G L NR +
Sbjct: 171 IEAMNGQY-LCNRQI 184
>gi|449459840|ref|XP_004147654.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus]
gi|449498825|ref|XP_004160645.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus]
Length = 379
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N Y+GNLD +V+E +L+++ +QAG VV++Y+P+D+ T+ +G+ F+E+ SEE Y
Sbjct: 22 NQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADY 81
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNA 114
AIK+ + ++ LY + +R + QDK +
Sbjct: 82 AIKVLN-MIKLYGKPIRVNKASQDKKS 107
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD V+E++LYD G +V + I RD +T +GF F+ Y+S E A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAA 170
Query: 89 IKLFSGIVTLYNRTL 103
I+ +G L NR +
Sbjct: 171 IEAMNG-QYLCNRQI 184
>gi|326519747|dbj|BAK00246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 368
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 24 SGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
S N Y+GNLD +V+E +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
Query: 84 IGHYAIKLFSGIVTLYNRTLRFALSGQDKNA 114
YAIK+ + ++ LY + +R + QDK +
Sbjct: 78 DADYAIKILN-MLKLYGKPIRVNKASQDKKS 107
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD +V+E++LYD G +V + I RD ET +GF FV Y+S E A
Sbjct: 111 GANLFIGNLDPEVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQA 170
Query: 89 IK 90
I+
Sbjct: 171 IE 172
>gi|297735183|emb|CBI17545.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 24 SGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
S N Y+GNLD +V E +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
Query: 84 IGHYAIKLFSGIVTLYNRTLRFALSGQDKNA 114
YAIK+ + ++ LY + +R + QDK +
Sbjct: 78 DADYAIKVLN-MIKLYGKPIRVNKASQDKKS 107
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N+++GNLD V+E++LYD G +V + I RD +T +GF FV Y+S E A
Sbjct: 111 GANLFVGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAA 170
Query: 89 IKLFSG 94
I+ +G
Sbjct: 171 IEAMNG 176
>gi|357146461|ref|XP_003574000.1| PREDICTED: splicing factor 3B subunit 4-like [Brachypodium
distachyon]
Length = 359
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 24 SGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
S N Y+GNLD +V+E +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
Query: 84 IGHYAIKLFSGIVTLYNRTLRFALSGQDKNA 114
YAIK+ + ++ LY + +R + QDK +
Sbjct: 78 DADYAIKILN-MLKLYGKPIRVNKASQDKKS 107
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD +V+E++LYD G +V + I RD ET +GF FV Y+S E A
Sbjct: 111 GANLFIGNLDPEVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQA 170
Query: 89 IK 90
I+
Sbjct: 171 IE 172
>gi|403335220|gb|EJY66784.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 307
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+GNLD KVNE +++++ +Q G +V+++IPRDK T++ G+ FVE+++EE Y
Sbjct: 17 NQEATLYVGNLDTKVNEELVWELFLQCGAIVNVHIPRDKVTNEHSGYGFVEFKTEEDADY 76
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQ 115
AIK+ +V L+ + ++ + QDK Q
Sbjct: 77 AIKIMH-MVKLFGKPIKVNKASQDKRTQ 103
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G NV++GNL E V+E++L D+ G V+ I RD ET K + FV Y++ E +I
Sbjct: 106 GANVFVGNLHEDVDEKMLRDVFSSFGIVLSTKIMRDPETQVSKRYGFVSYDNFESSDASI 165
Query: 90 KLFSG 94
+ +G
Sbjct: 166 QAMNG 170
>gi|84995240|ref|XP_952342.1| splicing factor 3b subunit 4 [Theileria annulata strain Ankara]
gi|65302503|emb|CAI74610.1| splicing factor 3b subunit 4, putative [Theileria annulata]
Length = 290
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
N N +YIGNLD + +E +L++ +QAGRV + IPRDK T + +GF FVEYE+E
Sbjct: 13 NRNQEATLYIGNLDLQADEELLWEFFMQAGRVKSINIPRDKVTGQHQGFGFVEYETETDA 72
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDK 112
YA+K+ + V LY++ L+ + +DK
Sbjct: 73 DYALKILN-FVKLYHKPLKLNKASKDK 98
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G +++GNLD++V+ER+L+D GRV+ + R + + K +A V ++ E A+
Sbjct: 104 GAKLFVGNLDDEVDERLLHDTFSAFGRVLSAKLVRSETSG--KTYAIVSFDDFEASDAAL 161
Query: 90 KLFSG 94
+ +G
Sbjct: 162 RTMNG 166
>gi|429327508|gb|AFZ79268.1| spliceosome associated protein, putative [Babesia equi]
Length = 311
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+GN+D +V+E +L+++ IQAG V +++IPRDK T + +G+ FVE+E+E+ Y
Sbjct: 15 NQEATLYVGNVDMQVDEELLWELFIQAGVVKNIHIPRDKVTGQHQGYGFVEFETEDDADY 74
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A+++ + V LYN+ LR + +DK
Sbjct: 75 AVRILN-FVKLYNKPLRLNKASRDK 98
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 16 SRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFA 75
SR+K I G N++IGN+DE+V+E++L+D G V+ I RD ++ +A
Sbjct: 95 SRDKENI-----EVGANLFIGNVDEEVDEKLLHDTFSAFGNVLLTKIVRDIDSAGRNAYA 149
Query: 76 FVEYESEEIGHYAIKLFSG 94
FV Y+S E A+ +G
Sbjct: 150 FVSYDSFEASDAALAAMNG 168
>gi|168024568|ref|XP_001764808.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684102|gb|EDQ70507.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 414
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N Y+GNLD +V+E +L+++ +QAG VV++Y+P+D+ T+ +G+ F+E+ SE+ Y
Sbjct: 22 NQDATAYVGNLDSQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEDDADY 81
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNA 114
AIK+ + ++ LY + +R + QDK +
Sbjct: 82 AIKILN-MIKLYGKPIRVNKASQDKKS 107
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N+++GNLD V+E++LYD G +V + I RD ++ +GF F+ Y+S E A
Sbjct: 111 GANLFVGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDSGNSRGFGFISYDSFEASDSA 170
Query: 89 IKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSS 126
I+ +G L NR T+ +A K ++ ++ L+S
Sbjct: 171 IEAMNGQY-LCNRAITVSYAYKKDTKGERHGTLAERMLAS 209
>gi|307110375|gb|EFN58611.1| hypothetical protein CHLNCDRAFT_10145, partial [Chlorella
variabilis]
Length = 329
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGF 74
V N + S + N Y+GN+D + NE +++++ +QAG VV++Y+P+D+ T++ + +
Sbjct: 6 VGANLIGVHSADRNQEATCYVGNIDPQANEELIWELFVQAGPVVNVYLPKDRVTNEHQSY 65
Query: 75 AFVEYESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDKN 113
FVE+ SEE YAIK+ + +V +Y + LR + QD+N
Sbjct: 66 GFVEFRSEEDADYAIKILN-MVKVYGKPLRVNKAAQDRN 103
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIG 85
++ G N++IG LD +V+E++LYD G +V + I RD +T KGF F+ ++S E
Sbjct: 105 ADVGANLFIGGLDPEVDEKLLYDTFSAFGVIVNNPKIMRDPDTGLTKGFGFLSFDSFEAS 164
Query: 86 HYAIKLFSGIVTLYNRTL 103
A++ +G L NR L
Sbjct: 165 DAALEAMNG-QYLMNRPL 181
>gi|71030596|ref|XP_764940.1| spliceosome associated protein [Theileria parva strain Muguga]
gi|68351896|gb|EAN32657.1| spliceosome associated protein, putative [Theileria parva]
Length = 290
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
N N +YIGNLD + +E +L++ +QAGRV + +PRDK T + +GF FVEYE+E
Sbjct: 13 NRNQEATLYIGNLDLQADEELLWEFFMQAGRVKSINVPRDKVTGQHQGFGFVEYETEVDA 72
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDK 112
YA+K+ + V LY++ L+ + +DK
Sbjct: 73 DYALKILN-FVKLYHKPLKLNKASKDK 98
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G +++GNLD++V+ER+L+D GRV+ + R + + K +A V ++ E A+
Sbjct: 104 GAKLFVGNLDDEVDERLLHDTFSAFGRVLSAKMVRSETSG--KTYAIVSFDDFEASDAAL 161
Query: 90 KLFSG 94
+ +G
Sbjct: 162 RTMNG 166
>gi|118350408|ref|XP_001008485.1| Splicing factor 3B subunit 4 [Tetrahymena thermophila]
gi|89290252|gb|EAR88240.1| Splicing factor 3B subunit 4 [Tetrahymena thermophila SB210]
Length = 325
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
NS +Y+G LD+KV + VL+++ Q G V+++++PRDK T + +G+ FVEY++EE Y
Sbjct: 9 NSDATLYVGGLDQKVTQEVLWELFSQCGIVINVHLPRDKITGEHQGYGFVEYKTEEDADY 68
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQ 115
AIK+ ++ LY + ++ + QDK Q
Sbjct: 69 AIKILH-LIKLYGKPIKVNKASQDKRTQ 95
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G N++IGNLD V E L + G ++ I RD + ++ KG+AF+ Y++ E AI
Sbjct: 98 GANIFIGNLDPSVTEMQLQETFSTFGLIIGRRIVRDSDNNQSKGYAFISYDNFESSDNAI 157
Query: 90 KLFSG 94
+G
Sbjct: 158 SAMNG 162
>gi|147840632|emb|CAN68319.1| hypothetical protein VITISV_032191 [Vitis vinifera]
Length = 312
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 24 SGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
S N Y+GNLD +V E +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
Query: 84 IGHYAIKLFSGIVTLYNRTLR 104
YAIK+ + ++ LY + +R
Sbjct: 78 DADYAIKVLN-MIKLYGKPIR 97
>gi|384250449|gb|EIE23928.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 358
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
+ N VY+GNLD +++E +++++ +Q+G VV++Y+P+D+ T + +G+ FVE++SE+
Sbjct: 24 DRNQDATVYVGNLDVQLSEELVWELFVQSGPVVNVYLPKDRVTSQHQGYGFVEFKSEDDA 83
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDKNAQN 116
YAIK+ + ++ +Y + +R + QDK Q+
Sbjct: 84 DYAIKILN-MIKVYGKPIRVNKASQDKKTQD 113
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGN+D V+E++LYD G ++ I RD ET KGF FV Y+S E A
Sbjct: 115 GANLFIGNIDPDVDEKLLYDTFSAFGMIIQTPKIMRDPETGATKGFGFVSYDSFEASDAA 174
Query: 89 IKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRK 128
I+ +G L NR T+ FA K ++ S L++++
Sbjct: 175 IEAMNGQF-LCNRPITVSFAYKKDTKGERHGSEAERQLATQQ 215
>gi|224094731|ref|XP_002310211.1| predicted protein [Populus trichocarpa]
gi|222853114|gb|EEE90661.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N Y+GNLD +V+E +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE Y
Sbjct: 3 NQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADY 62
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNA 114
AIK+ + ++ LY + +R + QDK +
Sbjct: 63 AIKVLN-MIKLYGKPIRVNKASQDKKS 88
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD V+E++L+D G +V + I RD ET +GF F+ Y+S E A
Sbjct: 92 GANLFIGNLDPDVDEKLLHDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDAA 151
Query: 89 IKLFSG 94
I+ +G
Sbjct: 152 IEAMNG 157
>gi|67540662|ref|XP_664105.1| hypothetical protein AN6501.2 [Aspergillus nidulans FGSC A4]
gi|40738651|gb|EAA57841.1| hypothetical protein AN6501.2 [Aspergillus nidulans FGSC A4]
gi|259480068|tpe|CBF70863.1| TPA: splicing factor 3b subunit 4 (AFU_orthologue; AFUA_6G05180)
[Aspergillus nidulans FGSC A4]
Length = 352
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERVSDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFNSEEDAEYASR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ +GI LY + +R + DK
Sbjct: 73 IMNGI-RLYGKPIRVNKASADKQ 94
Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VLYD + G +V+L + RD +++ KG+ FV + E A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGNLVNLPKVARD-DSNLSKGYGFVSFADFESSDAA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 IANMNG 164
>gi|403221974|dbj|BAM40106.1| splicing factor 3b subunit 4 [Theileria orientalis strain Shintoku]
Length = 326
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +YIGNLD + +E +L++ +QAGRV + IPRDK T + +GF FVEYE+E Y
Sbjct: 15 NQEATLYIGNLDIQADEELLWEFFMQAGRVRSINIPRDKVTGQHQGFGFVEYETETDADY 74
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A+++ + + LY++ LR + +DK
Sbjct: 75 ALRILN-FIKLYHKPLRLNKASKDK 98
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
N+ G N++IGN+D++V+E++L+D G VV I RD E + + +AFV +++ E
Sbjct: 100 NTEIGANLFIGNIDDEVDEKLLHDTFSAFGTVVFTKIVRD-EANSGRSYAFVSFDNFESS 158
Query: 86 HYAIKLFSG 94
A+ +G
Sbjct: 159 DAALASMNG 167
>gi|238493972|ref|XP_002378222.1| splicing factor 3b subunit 4 [Aspergillus flavus NRRL3357]
gi|317148789|ref|XP_001822912.2| spliceosome-associated protein 49 [Aspergillus oryzae RIB40]
gi|220694872|gb|EED51215.1| splicing factor 3b subunit 4 [Aspergillus flavus NRRL3357]
Length = 354
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYASR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDK 112
+ +GI LY + +R + DK
Sbjct: 73 IMNGI-RLYGKPIRVNKASADK 93
Score = 42.7 bits (99), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VLY+ + G +++L I RD + + KG+ FV + E A
Sbjct: 100 GAELFVGNLDPMVTEQVLYNTFSRFGNLINLPKIARD-DNNLSKGYGFVSFGDFESSDAA 158
Query: 89 IKLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSRKSR------SDPVPMPVNG 140
I +G + + ++++A K ++ L+++ + + P+P P +G
Sbjct: 159 IANMNGQYLMNKQVSVQYAYKKDGKGERHGDQAERMLAAQARKHNVRPPTQPLPSPFSG 217
>gi|145491019|ref|XP_001431509.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145522722|ref|XP_001447205.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398614|emb|CAK64111.1| unnamed protein product [Paramecium tetraurelia]
gi|124414705|emb|CAK79808.1| unnamed protein product [Paramecium tetraurelia]
Length = 260
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +YIGNLD+KV + +++++ IQ G VV+++IP+DK + + +G+ FVE++SEE Y
Sbjct: 16 NQEATIYIGNLDQKVTDDIVWELFIQCGPVVNVHIPKDKISGEHQGYGFVEFKSEEDADY 75
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQ 115
AIK+ ++ LY + ++ + QDK Q
Sbjct: 76 AIKIMH-MIKLYGKPIKVNKASQDKRTQ 102
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G N++IGNLD +++E+ LY+ G ++ I R+ ET KG+ FV Y++ E A+
Sbjct: 105 GANLFIGNLDTEIDEKTLYETFSAFGHILSTKIMRNPETGVSKGYGFVSYDNFESSDGAL 164
Query: 90 KLFSG 94
+G
Sbjct: 165 TAMNG 169
>gi|358375675|dbj|GAA92254.1| splicing factor 3b subunit 4 [Aspergillus kawachii IFO 4308]
Length = 352
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYASR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDK 112
+ +GI LY + +R + DK
Sbjct: 73 IMNGI-RLYGKPIRVNKASADK 93
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VLYD + G +V++ I RD + + KG+ FV + E A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGNLVNIPKIARD-DNNLSKGYGFVSFADFESSDAA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 ITNMNG 164
>gi|145250071|ref|XP_001396549.1| spliceosome-associated protein 49 [Aspergillus niger CBS 513.88]
gi|134082060|emb|CAK42179.1| unnamed protein product [Aspergillus niger]
gi|350636041|gb|EHA24401.1| hypothetical protein ASPNIDRAFT_56267 [Aspergillus niger ATCC 1015]
Length = 351
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYASR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDK 112
+ +GI LY + +R + DK
Sbjct: 73 IMNGI-RLYGKPIRVNKASADK 93
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VLYD + G +V++ I RD + + KG+ FV + E A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGNLVNIPKIARD-DNNLSKGYGFVSFADFESSDAA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 ITNMNG 164
>gi|121703528|ref|XP_001270028.1| splicing factor 3b subunit 4 [Aspergillus clavatus NRRL 1]
gi|119398172|gb|EAW08602.1| splicing factor 3b subunit 4 [Aspergillus clavatus NRRL 1]
Length = 354
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYASR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ +GI LY + +R + DK
Sbjct: 73 IMNGI-RLYGKPIRVNKASADKQ 94
Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VLYD + G +V++ + RD + + KG+ FV + E A
Sbjct: 100 GAELFVGNLDPLVTEQVLYDTFSRFGTLVNIPKVARD-DNNLSKGYGFVSFADFESSDAA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 IANMNG 164
>gi|70984076|ref|XP_747559.1| splicing factor 3b subunit 4 [Aspergillus fumigatus Af293]
gi|66845186|gb|EAL85521.1| splicing factor 3b subunit 4 [Aspergillus fumigatus Af293]
gi|159122344|gb|EDP47465.1| splicing factor 3b subunit 4 [Aspergillus fumigatus A1163]
Length = 352
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYASR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDK 112
+ +GI LY + +R + DK
Sbjct: 73 IMNGI-RLYGKPIRVNKASADK 93
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VLYD + G +V++ + RD + + KG+ FV + E A
Sbjct: 100 GAELFVGNLDPLVTEQVLYDTFSRFGTLVNIPKVARD-DNNLSKGYGFVSFADFESSDAA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 IANMNG 164
>gi|297836592|ref|XP_002886178.1| hypothetical protein ARALYDRAFT_480759 [Arabidopsis lyrata subsp.
lyrata]
gi|297332018|gb|EFH62437.1| hypothetical protein ARALYDRAFT_480759 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 24 SGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
S N VY+GNLD +++E +L+++ +QAG VV++Y+P+D+ T+ + + F+EY SEE
Sbjct: 18 SAERNQDATVYVGNLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEE 77
Query: 84 IGHYAIKLFSGIVTLYNRTLRFALSGQDKNA 114
YAIK+ + ++ ++ + +R + QDK +
Sbjct: 78 DADYAIKVLN-MIKVHGKPIRVNKASQDKKS 107
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD V+E++LYD G + + I RD +T +GF F+ Y+S E A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAA 170
Query: 89 IKLFSGIVTLYNR--TLRFALSGQDKNAQNSS-----MTTTPLSSRKSR 130
I+ +G L NR T+ +A K ++ + + T S++KSR
Sbjct: 171 IEAMTGQY-LSNRQITVSYAYKKDTKGERHGTPAERLLAATNPSAQKSR 218
>gi|299117359|emb|CBN75315.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 529
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N Y GNLD V E +L++++IQAG V ++++P+DK T +GF FVE+ SE+ Y
Sbjct: 9 NQDATCYTGNLDSSVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDAEY 68
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQN 116
AIK+ + +V L+ + LR + QD+ A +
Sbjct: 69 AIKIMN-MVKLFGKPLRVNKASQDRKAND 96
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IG LD V+E++LYD G + + RD +T KG+ FV Y+ E A
Sbjct: 98 GANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKA 157
Query: 89 IKLF 92
I+
Sbjct: 158 IECM 161
>gi|296424721|ref|XP_002841895.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638146|emb|CAZ86086.1| unnamed protein product [Tuber melanosporum]
Length = 392
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V++ +++++++QAGR+V++++P+D+ T +GF FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERVSDALVWELMLQAGRIVNVHLPKDRVTQTHQGFGFVEFISEEDAEYAAR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V+E+ L+D G +V I RD + KGF F+ Y+S E A
Sbjct: 100 GAELFVGNLDPMVDEKTLFDTFTTFGNLVSAPKIARDDQGIS-KGFGFISYDSFEASDKA 158
Query: 89 IK 90
I+
Sbjct: 159 IE 160
>gi|14334958|gb|AAK59656.1| putative spliceosome associated protein [Arabidopsis thaliana]
Length = 363
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 24 SGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
S N VY+G LD +++E +L+++ +QAG VV++Y+P+D+ T+ + + F+EY SEE
Sbjct: 18 SAERNQDATVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEE 77
Query: 84 IGHYAIKLFSGIVTLYNRTLRFALSGQDKNA 114
YAIK+ + ++ L+ + +R + QDK +
Sbjct: 78 DADYAIKVLN-MIKLHGKPMRVNKASQDKKS 107
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD V+E++LYD G + + I RD +T +GF F+ Y+S E A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAA 170
Query: 89 IKLFSG 94
I+ +G
Sbjct: 171 IESMTG 176
>gi|21593441|gb|AAM65408.1| putative spliceosome associated protein [Arabidopsis thaliana]
Length = 363
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 24 SGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
S N VY+G LD +++E +L+++ +QAG VV++Y+P+D+ T+ + + F+EY SEE
Sbjct: 18 SAERNQDATVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEE 77
Query: 84 IGHYAIKLFSGIVTLYNRTLRFALSGQDKNA 114
YAIK+ + ++ L+ + +R + QDK +
Sbjct: 78 DADYAIKVLN-MIKLHGKPIRVNKASQDKKS 107
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD V+E++LYD G + + I RD +T +GF F+ Y+S E A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAA 170
Query: 89 IKLFSG 94
I+ +G
Sbjct: 171 IESMTG 176
>gi|119467844|ref|XP_001257728.1| splicing factor 3b subunit 4 [Neosartorya fischeri NRRL 181]
gi|119405880|gb|EAW15831.1| splicing factor 3b subunit 4 [Neosartorya fischeri NRRL 181]
Length = 352
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYASR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDK 112
+ +GI LY + +R + DK
Sbjct: 73 IMNGI-RLYGKPIRVNKASADK 93
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VLYD + G +V++ + RD + + KG+ FV + E A
Sbjct: 100 GAELFVGNLDPLVTEQVLYDTFSRFGTLVNIPKVARD-DNNLSKGYGFVSFADFESSDAA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 IANMNG 164
>gi|115398490|ref|XP_001214834.1| spliceosome-associated protein 49 [Aspergillus terreus NIH2624]
gi|114191717|gb|EAU33417.1| spliceosome-associated protein 49 [Aspergillus terreus NIH2624]
Length = 349
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VY+GNLDE+V + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYVGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYASR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDK 112
+ +GI LY + +R + DK
Sbjct: 73 IMNGI-RLYGKPIRVNKASADK 93
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-------YIPRDKETDKPKGFAFVEYESE 82
G +++GNLD V E+VLYD + G ++++ ++ RD + + KG+ FV +
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGNLINIPKASLFSWVARD-DNNLSKGYGFVSFGDF 158
Query: 83 EIGHYAIKLFSG 94
E AI +G
Sbjct: 159 ESSDAAIANMNG 170
>gi|410910988|ref|XP_003968972.1| PREDICTED: splicing factor 3B subunit 4-like [Takifugu rubripes]
Length = 397
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|15224186|ref|NP_179441.1| splicing factor 3B subunit 4 [Arabidopsis thaliana]
gi|4218014|gb|AAD12222.1| putative spliceosome associated protein [Arabidopsis thaliana]
gi|23297611|gb|AAN12991.1| putative spliceosome-associated protein [Arabidopsis thaliana]
gi|330251682|gb|AEC06776.1| splicing factor 3B subunit 4 [Arabidopsis thaliana]
Length = 363
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 24 SGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
S N VY+G LD +++E +L+++ +QAG VV++Y+P+D+ T+ + + F+EY SEE
Sbjct: 18 SAERNQDATVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEE 77
Query: 84 IGHYAIKLFSGIVTLYNRTLRFALSGQDKNA 114
YAIK+ + ++ L+ + +R + QDK +
Sbjct: 78 DADYAIKVLN-MIKLHGKPIRVNKASQDKKS 107
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD V+E++LYD G + + I RD +T +GF F+ Y+S E A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAA 170
Query: 89 IKLFSG 94
I+ +G
Sbjct: 171 IESMTG 176
>gi|425773760|gb|EKV12094.1| Splicing factor 3b subunit 4 [Penicillium digitatum PHI26]
gi|425782322|gb|EKV20241.1| Splicing factor 3b subunit 4 [Penicillium digitatum Pd1]
Length = 366
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA K
Sbjct: 13 ATVYIGNLDERVSDSLVWELMLQAGRIVNVHLPKDRVTQLHQGYGFVEFISEEDAEYASK 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ +GI L+ + +R + DK
Sbjct: 73 IMNGI-RLHGKPIRVNKASADKQ 94
>gi|323451637|gb|EGB07513.1| hypothetical protein AURANDRAFT_59062 [Aureococcus anophagefferens]
Length = 350
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N Y+GNLDE++ E +L+++++QAG + ++++PRDK T +G+ FVE+ SEE Y
Sbjct: 10 NQDATCYVGNLDEQLTEELLWEMMLQAGPIGNVHLPRDKVTGSHQGYGFVEFRSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A+K+ + +V L+ + LR + QDK
Sbjct: 70 ALKVMN-MVKLFGKPLRVNKASQDK 93
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N+++G LD V+E++LYD G + + I RD +T KGF FV Y+S E A
Sbjct: 99 GANLFVGGLDVDVDEKLLYDTFSAFGTITETPKIMRDPDTGNSKGFGFVSYDSFEASDLA 158
Query: 89 IKL 91
I+
Sbjct: 159 IEC 161
>gi|340382462|ref|XP_003389738.1| PREDICTED: hypothetical protein LOC100632716 [Amphimedon
queenslandica]
Length = 433
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LDEKV+E VL+++ +QAG VV+++IPRD+ T +G+ FVE+ E+ Y
Sbjct: 10 NQDATIYVGGLDEKVSESVLWELFLQAGPVVNIHIPRDRITQTHQGYGFVEFMGEDDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD +++E++LYDI G ++ I RD ++ KGFAFV + S + A
Sbjct: 99 GANLFIGNLDPEIDEKMLYDIFSAFGVILQAPKIMRDVDSGGSKGFAFVNFASFDASDAA 158
Query: 89 IKLFSG 94
I+ +G
Sbjct: 159 IEAMNG 164
>gi|348684961|gb|EGZ24776.1| hypothetical protein PHYSODRAFT_484926 [Phytophthora sojae]
Length = 209
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+GNLD++V E +L+++++QAG V ++++PRDK T + + FVE+ +EE Y
Sbjct: 9 NQDATVYVGNLDDRVTEELLWELMLQAGSVCNVHMPRDKVTGSHQNYGFVEFRTEECAEY 68
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A+K+ + +V L+ + +R + D+
Sbjct: 69 AVKVLN-MVQLFGKAIRVKKASSDR 92
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 84
N + G N+++GNLD +V+E++LYD G +++ I RD +T +GF FV ++S E
Sbjct: 94 NLDVGANLFLGNLDPEVDEKLLYDTFSAFGGIIETPKIMRDPDTKASRGFGFVSFDSFEA 153
Query: 85 GHYAIKLFSG 94
AI+ G
Sbjct: 154 ADLAIECMHG 163
>gi|147898449|ref|NP_001089615.1| uncharacterized protein LOC734673 [Xenopus laevis]
gi|68534615|gb|AAH99272.1| MGC116464 protein [Xenopus laevis]
Length = 391
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
+S N ++YIGNLD +VNE +L++ ++QAG V+ + +PRDK + +G+ FVE+++E
Sbjct: 3 LSEQRNQEASIYIGNLDSQVNEEILWECMLQAGPVLSVNMPRDKVSGFHQGYGFVEFKTE 62
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDK 112
E YA+K+ + ++ LYN+ +R + DK
Sbjct: 63 EDADYALKVMN-MIKLYNKPIRCNKATTDK 91
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N+++GNL +V+E++L+D Q G ++ I +D E+ KGFAFV ++S + +A
Sbjct: 97 GANLFVGNLAPEVDEKMLFDTFSQFGNLISTPKIMKDPESGGSKGFAFVSFDSFDGADHA 156
Query: 89 IKLFSGIVTLYNRTL 103
I+ +G YN+ +
Sbjct: 157 IQSMNGQF-FYNKQI 170
>gi|326472489|gb|EGD96498.1| splicing factor 3b subunit 4 [Trichophyton tonsurans CBS 112818]
Length = 362
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V +++++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERVTDKLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFNSEEDAEYASR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
>gi|194036296|ref|XP_001926524.1| PREDICTED: splicing factor 3B subunit 4 [Sus scrofa]
gi|344275508|ref|XP_003409554.1| PREDICTED: splicing factor 3B subunit 4-like [Loxodonta africana]
gi|417400717|gb|JAA47284.1| Putative splicing factor 3b subunit 4 [Desmodus rotundus]
Length = 424
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|302510905|ref|XP_003017404.1| hypothetical protein ARB_04284 [Arthroderma benhamiae CBS 112371]
gi|291180975|gb|EFE36759.1| hypothetical protein ARB_04284 [Arthroderma benhamiae CBS 112371]
Length = 379
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V +++++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERVTDKLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFNSEEDAEYASR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VLYD + G ++ L + RD +++ KG+ F+ + + E A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGSLISLPKVARD-DSNLSKGYGFISFSNFEASDDA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 IANMNG 164
>gi|118102061|ref|XP_423721.2| PREDICTED: splicing factor 3B subunit 4 [Gallus gallus]
Length = 418
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|290999559|ref|XP_002682347.1| predicted protein [Naegleria gruberi]
gi|284095974|gb|EFC49603.1| predicted protein [Naegleria gruberi]
Length = 204
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +++GNLD++V+E +L+++ +Q G VVD IPRD+ T+ G+AFVE++ E +Y
Sbjct: 3 NQEATIFVGNLDQQVDEELLWELFVQMGPVVDAKIPRDRITNTHSGYAFVEFKHEHDANY 62
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQN 116
AI++ + I L+ R ++ QDK+A+N
Sbjct: 63 AIQVMNQI-KLFGRPMKLNRYDQDKSAKN 90
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 26 NSNSGCNVYIGNLD--EKVNERVLYDILIQAGRVVDLY--IPRDKETDKPKGFAFVEYES 81
N + G N+++GNLD +E +L ++ Q G ++ I RD ET + KGFAFV Y++
Sbjct: 90 NLDVGANLWVGNLDPVGVSDEGILRELFGQFGVMIQNTPRIQRDPETMESKGFAFVSYDN 149
Query: 82 EE 83
E
Sbjct: 150 FE 151
>gi|403302777|ref|XP_003942029.1| PREDICTED: splicing factor 3B subunit 4 [Saimiri boliviensis
boliviensis]
Length = 424
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I +D +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMQDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|440797982|gb|ELR19056.1| spliceosomal protein, putative [Acanthamoeba castellanii str. Neff]
Length = 316
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LD +V+E +L+++++Q+G VV++YIP+DK T+ +G+ FVE+ +EE Y
Sbjct: 8 NQDATVYVGELDSRVSEALLWELMLQSGPVVNVYIPKDKLTNLHQGYGFVEFATEEDAEY 67
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + LR
Sbjct: 68 AIKIMN-MIKLYGKPLR 83
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD +V+E++LYD G ++ I RD ET + +GF FV ++S E A
Sbjct: 97 GANLFIGNLDAEVDEKLLYDTFSAFGVIITTPKIMRDPETGESRGFGFVSFDSFESSDAA 156
Query: 89 IK 90
I+
Sbjct: 157 IE 158
>gi|5032069|ref|NP_005841.1| splicing factor 3B subunit 4 [Homo sapiens]
gi|386781627|ref|NP_001248161.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|114559210|ref|XP_513768.2| PREDICTED: splicing factor 3B subunit 4 isoform 4 [Pan troglodytes]
gi|397492924|ref|XP_003817370.1| PREDICTED: splicing factor 3B subunit 4 [Pan paniscus]
gi|402856043|ref|XP_003892612.1| PREDICTED: splicing factor 3B subunit 4 [Papio anubis]
gi|426331272|ref|XP_004026606.1| PREDICTED: splicing factor 3B subunit 4 [Gorilla gorilla gorilla]
gi|2500587|sp|Q15427.1|SF3B4_HUMAN RecName: Full=Splicing factor 3B subunit 4; AltName:
Full=Pre-mRNA-splicing factor SF3b 49 kDa subunit;
AltName: Full=SF3b50; AltName:
Full=Spliceosome-associated protein 49; Short=SAP 49
gi|556217|gb|AAA60300.1| spliceosomal protein [Homo sapiens]
gi|13279089|gb|AAH04273.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|15530216|gb|AAH13886.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|55960588|emb|CAI12648.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|55960980|emb|CAI12554.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|60688325|gb|AAH90883.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|119573980|gb|EAW53595.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|123989960|gb|ABM83897.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|123999284|gb|ABM87219.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|157928508|gb|ABW03550.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|261859948|dbj|BAI46496.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|355745635|gb|EHH50260.1| hypothetical protein EGM_01064 [Macaca fascicularis]
gi|380808686|gb|AFE76218.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|383415041|gb|AFH30734.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|410207952|gb|JAA01195.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410251462|gb|JAA13698.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410292418|gb|JAA24809.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410337561|gb|JAA37727.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
Length = 424
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|126313662|ref|XP_001365466.1| PREDICTED: splicing factor 3B subunit 4-like [Monodelphis
domestica]
Length = 424
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|296228655|ref|XP_002759903.1| PREDICTED: splicing factor 3B subunit 4 [Callithrix jacchus]
Length = 424
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|348586343|ref|XP_003478928.1| PREDICTED: splicing factor 3B subunit 4-like [Cavia porcellus]
Length = 424
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|327297502|ref|XP_003233445.1| splicing factor 3b subunit 4 [Trichophyton rubrum CBS 118892]
gi|326464751|gb|EGD90204.1| splicing factor 3b subunit 4 [Trichophyton rubrum CBS 118892]
Length = 379
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V +++++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERVTDKLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFNSEEDAEYASR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VLYD + G ++ L + RD +++ KG+ F+ + + E A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGSLISLPKVARD-DSNLSKGYGFISFSNFEASDDA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 IANMNG 164
>gi|302668184|ref|XP_003025667.1| hypothetical protein TRV_00155 [Trichophyton verrucosum HKI 0517]
gi|291189788|gb|EFE45056.1| hypothetical protein TRV_00155 [Trichophyton verrucosum HKI 0517]
Length = 379
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V +++++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERVTDKLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFNSEEDAEYASR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VLYD + G ++ L + RD +++ KG+ F+ + + E A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGSLISLPKVARD-DSNLSKGYGFISFSNFEASDDA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 IANMNG 164
>gi|387018636|gb|AFJ51436.1| Splicing factor 3B subunit 4-like [Crotalus adamanteus]
Length = 417
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|345782582|ref|XP_540295.3| PREDICTED: splicing factor 3B subunit 4 [Canis lupus familiaris]
Length = 424
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|260841232|ref|XP_002613832.1| hypothetical protein BRAFLDRAFT_72046 [Branchiostoma floridae]
gi|229299222|gb|EEN69841.1| hypothetical protein BRAFLDRAFT_72046 [Branchiostoma floridae]
Length = 365
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEALLWELFLQAGPVVNTHMPKDRVTQAHQGYGFVEFMSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD ET KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S + AI+ +G L NR T+ +A K ++ S L+++
Sbjct: 147 INFASFDASDAAIEAMNGQY-LCNRPITISYAFKKDSKGERHGSAAERLLAAQ 198
>gi|194210863|ref|XP_001488649.2| PREDICTED: splicing factor 3B subunit 4-like [Equus caballus]
Length = 450
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|62898205|dbj|BAD97042.1| splicing factor 3b, subunit 4 variant [Homo sapiens]
Length = 424
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ ++ LY + +R
Sbjct: 70 AIKIMD-MIKLYGKPIR 85
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|410968226|ref|XP_004001545.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3B subunit 4 [Felis
catus]
Length = 424
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|329663420|ref|NP_001192513.1| splicing factor 3B subunit 4 [Bos taurus]
gi|395856067|ref|XP_003800464.1| PREDICTED: splicing factor 3B subunit 4 [Otolemur garnettii]
gi|426216470|ref|XP_004002485.1| PREDICTED: splicing factor 3B subunit 4 [Ovis aries]
gi|281346199|gb|EFB21783.1| hypothetical protein PANDA_020653 [Ailuropoda melanoleuca]
gi|296489611|tpg|DAA31724.1| TPA: splicing factor 3b, subunit 4, 49kDa [Bos taurus]
Length = 424
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|355558380|gb|EHH15160.1| hypothetical protein EGK_01215 [Macaca mulatta]
Length = 424
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSG 94
+ + S + AI+ +G
Sbjct: 147 INFASFDASDAAIEAMNG 164
>gi|431896603|gb|ELK06015.1| Splicing factor 3B subunit 4 [Pteropus alecto]
Length = 424
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|83771650|dbj|BAE61780.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871241|gb|EIT80403.1| splicing factor 3b, subunit 4 [Aspergillus oryzae 3.042]
Length = 139
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYASR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ +GI LY + +R + DK
Sbjct: 73 IMNGI-RLYGKPIRVNKASADKQ 94
>gi|296810102|ref|XP_002845389.1| splicing factor 3B subunit 4 [Arthroderma otae CBS 113480]
gi|238842777|gb|EEQ32439.1| splicing factor 3B subunit 4 [Arthroderma otae CBS 113480]
Length = 371
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V +++++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERVTDKLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFNSEEDAEYASR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDK 112
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADK 93
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VLYD + G ++ L + RD +++ KG+ F+ + + E A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGSLISLPKVARD-DSNLSKGYGFISFSNFEASDDA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 IANMNG 164
>gi|193783541|dbj|BAG53452.1| unnamed protein product [Homo sapiens]
Length = 424
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++I NLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKALAHNKNLDVGANIFIENLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|45360881|ref|NP_989116.1| splicing factor 3b, subunit 4, 49kDa [Xenopus (Silurana)
tropicalis]
gi|38512254|gb|AAH61357.1| splicing factor 3b, subunit 4, 49kDa [Xenopus (Silurana)
tropicalis]
gi|89268695|emb|CAJ83013.1| splicing factor 3b, subunit 4, 49kDa [Xenopus (Silurana)
tropicalis]
Length = 388
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S + AI+ +G L NR T+ +A K ++ S L+++
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQ 198
>gi|327290521|ref|XP_003229971.1| PREDICTED: splicing factor 3B subunit 4-like [Anolis carolinensis]
Length = 417
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|23346437|ref|NP_694693.1| splicing factor 3B subunit 4 [Mus musculus]
gi|58865472|ref|NP_001011951.1| splicing factor 3B subunit 4 [Rattus norvegicus]
gi|354472911|ref|XP_003498680.1| PREDICTED: splicing factor 3B subunit 4-like [Cricetulus griseus]
gi|81910895|sp|Q6AYL5.1|SF3B4_RAT RecName: Full=Splicing factor 3B subunit 4
gi|81914822|sp|Q8QZY9.1|SF3B4_MOUSE RecName: Full=Splicing factor 3B subunit 4
gi|20071686|gb|AAH26567.1| Splicing factor 3b, subunit 4 [Mus musculus]
gi|26338948|dbj|BAC33145.1| unnamed protein product [Mus musculus]
gi|37537250|gb|AAH24418.3| Splicing factor 3b, subunit 4 [Mus musculus]
gi|50925599|gb|AAH78997.1| Splicing factor 3b, subunit 4 [Rattus norvegicus]
gi|55391441|gb|AAH85273.1| Splicing factor 3b, subunit 4 [Mus musculus]
gi|74183317|dbj|BAE22576.1| unnamed protein product [Mus musculus]
gi|148706922|gb|EDL38869.1| splicing factor 3b, subunit 4 [Mus musculus]
gi|149030610|gb|EDL85647.1| rCG51900 [Rattus norvegicus]
gi|344238680|gb|EGV94783.1| Splicing factor 3B subunit 4 [Cricetulus griseus]
Length = 424
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|255077948|ref|XP_002502554.1| predicted protein [Micromonas sp. RCC299]
gi|226517819|gb|ACO63812.1| predicted protein [Micromonas sp. RCC299]
Length = 325
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+GNLD +V E +++++ +QAG VV++Y+P+D+ ++ +G+AFVEY EE Y
Sbjct: 28 NQEATVYVGNLDPQVTEEIVWEVFVQAGPVVNVYMPKDRVSNAHQGYAFVEYRGEEDADY 87
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQN 116
AIK+ + ++ L+ + +R + DK + +
Sbjct: 88 AIKVLN-MIKLFGKPIRANKASVDKKSTD 115
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
+ NK + +++ G N+++GNLD ++E++LYD G V+ I RD +T +G
Sbjct: 102 IRANKASVDKKSTDVGANLFVGNLDPDMDEKLLYDTFSAFGVVITTPKIMRDPDTGNSRG 161
Query: 74 FAFVEYESEEIGHYAIKLFSG 94
F FV Y+S E AI+ +G
Sbjct: 162 FGFVSYDSFEASDAAIEAMNG 182
>gi|315044761|ref|XP_003171756.1| splicing factor 3B subunit 4 [Arthroderma gypseum CBS 118893]
gi|311344099|gb|EFR03302.1| splicing factor 3B subunit 4 [Arthroderma gypseum CBS 118893]
Length = 382
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V +++++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERVTDKLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFNSEEDAEYASR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDK 112
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADK 93
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VLYD + G ++ L + RD +++ KG+ F+ + + E A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGSLISLPKVARD-DSNLSKGYGFISFSNFEASDDA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 IANMNG 164
>gi|444515113|gb|ELV10775.1| Splicing factor 3B subunit 4 [Tupaia chinensis]
Length = 355
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|75948207|gb|AAI05267.1| SF3B4 protein [Bos taurus]
Length = 418
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 4 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 63
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 64 AIKIMN-MIKLYGKPIR 79
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 81 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 140
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 141 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 196
>gi|156088689|ref|XP_001611751.1| RNA recognition motif domaining containing protein [Babesia bovis]
gi|154799005|gb|EDO08183.1| RNA recognition motif domaining containing protein [Babesia bovis]
Length = 280
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
+ N +Y+GN+D +V+E +L++ +Q G V L+IPRDK T +G+AFVE+++++
Sbjct: 13 DRNQEATLYVGNVDTQVDEELLWEFFVQVGPVKHLHIPRDKVTGHHQGYAFVEFDTDDDA 72
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDKN 113
YAI++ + V LYN+ LR + +DK
Sbjct: 73 DYAIRILN-FVKLYNKPLRLNKASRDKQ 99
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G N++IGNLD V+++ L+D G V+ + RD + K FAFV Y+S E A+
Sbjct: 104 GANLFIGNLDPDVDDKQLHDTFASFGNVISANVVRDGDATDRKAFAFVSYDSFEASDAAL 163
Query: 90 KLFSG 94
+G
Sbjct: 164 AAMNG 168
>gi|148229719|ref|NP_001086794.1| MGC82420 protein [Xenopus laevis]
gi|50604232|gb|AAH77458.1| MGC82420 protein [Xenopus laevis]
Length = 383
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ Y S + AI+ +G L NR T+ +A K ++ S L+++
Sbjct: 147 INYASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQ 198
>gi|340381114|ref|XP_003389066.1| PREDICTED: splicing factor 3B subunit 4-like [Amphimedon
queenslandica]
Length = 364
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LDEKV+E VL+++ +QAG VV+++IPRD+ T +G+ FVE+ E+ Y
Sbjct: 10 NQDATIYVGGLDEKVSESVLWELFLQAGPVVNIHIPRDRITQTHQGYGFVEFMGEDDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD +++E++LYDI G ++ I RD ++ KGFAFV + S + A
Sbjct: 99 GANLFIGNLDPEIDEKMLYDIFSAFGVILQAPKIMRDVDSGGSKGFAFVNFASFDASDAA 158
Query: 89 IKLFSG 94
I+ +G
Sbjct: 159 IEAMNG 164
>gi|159476562|ref|XP_001696380.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
gi|158282605|gb|EDP08357.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
Length = 396
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
+ N VY+GNLD + E +++++ QAG VV++Y+P+D+ T+ +G+ FVE++ EE
Sbjct: 26 DRNQEATVYVGNLDVQTTEELVWELFTQAGPVVNVYMPKDRVTNAHQGYGFVEFKGEEDA 85
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDK 112
YAIK+ + +V +Y + +R + QDK
Sbjct: 86 DYAIKVLN-MVKVYGKAIRVNKASQDK 111
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
S++KRQ ++ G N++IGNLD V+E++LYD G +V+ I RD +T +G
Sbjct: 107 ASQDKRQ-----ADVGANLFIGNLDPDVDEKLLYDTFSAFGVIVNTPKIMRDPDTGNSRG 161
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNRTL 103
F FV Y+ E AI+ +G L NR +
Sbjct: 162 FGFVSYDCFEASDAAIEAMNGQY-LCNRAI 190
>gi|213402019|ref|XP_002171782.1| spliceosome-associated protein [Schizosaccharomyces japonicus
yFS275]
gi|211999829|gb|EEB05489.1| spliceosome-associated protein [Schizosaccharomyces japonicus
yFS275]
Length = 303
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +YIGNLD+KV + +L+++ +QAG VV ++IPRD+ GF F EY +E Y
Sbjct: 7 NQEATIYIGNLDDKVTDSILFELCLQAGPVVHIHIPRDRIRATHNGFGFCEYATEADAEY 66
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQ 115
A ++ + V L+ + +R S QDKN Q
Sbjct: 67 ACQVLNQ-VKLFGKAIRVNKSSQDKNTQ 93
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G NV++GNLD V+E+VL+D G++V + RD ++ K KG+ FV ++S E G A
Sbjct: 97 GANVFVGNLDTLVDEKVLFDTFSAFGQMVQPPQVVRD-DSGKSKGYGFVFFDSFEAGDAA 155
Query: 89 IK 90
I+
Sbjct: 156 IE 157
>gi|148226626|ref|NP_001080100.1| splicing factor 3b, subunit 4, 49kDa [Xenopus laevis]
gi|28374170|gb|AAH45264.1| Spx-prov protein [Xenopus laevis]
Length = 377
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ Y S + AI+ +G L NR T+ +A K ++ S L+++
Sbjct: 147 INYASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQ 198
>gi|355718837|gb|AES06403.1| splicing factor 3b, subunit 4, 49kDa [Mustela putorius furo]
Length = 406
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 8 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 67
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 68 AIKIMN-MIKLYGKPIR 83
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 85 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 144
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 145 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 200
>gi|432114293|gb|ELK36221.1| Splicing factor 3B subunit 4 [Myotis davidii]
Length = 379
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|449489905|ref|XP_002191033.2| PREDICTED: splicing factor 3B subunit 4 [Taeniopygia guttata]
Length = 307
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|441636543|ref|XP_004093131.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3B subunit 4
[Nomascus leucogenys]
Length = 372
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 36.6 bits (83), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYD 49
NK + N + G N+++GNLD +++E++LYD
Sbjct: 87 NKASAHNXNLDVGANIFVGNLDPEIDEKLLYD 118
>gi|351705667|gb|EHB08586.1| Splicing factor 3B subunit 4 [Heterocephalus glaber]
Length = 486
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|340502094|gb|EGR28811.1| splicing factor subunit 4, putative [Ichthyophthirius multifiliis]
Length = 267
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G +D+KV + VL+++ Q G VV++++P+DK T + +G+ FVE++SEE Y
Sbjct: 9 NPDATIYVGGIDQKVTQEVLWELFSQCGIVVNVHLPKDKITGEHQGYGFVEFKSEEDADY 68
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQ 115
+IK+ +V LY + ++ + QDK Q
Sbjct: 69 SIKIMH-LVKLYGKPIKVNKASQDKRTQ 95
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G N++IGNLD+ + E+ L+D Q G ++ I RD + D+ KG+AFV Y++ E AI
Sbjct: 98 GANIFIGNLDQSITEQQLHDTFSQFGLIISRRIVRDPDNDESKGYAFVSYDNFEAADAAI 157
Query: 90 KLFSG 94
+G
Sbjct: 158 NTMNG 162
>gi|291398067|ref|XP_002715414.1| PREDICTED: splicing factor 3b, subunit 4 [Oryctolagus cuniculus]
Length = 384
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|242824075|ref|XP_002488188.1| splicing factor 3b subunit 4 [Talaromyces stipitatus ATCC 10500]
gi|218713109|gb|EED12534.1| splicing factor 3b subunit 4 [Talaromyces stipitatus ATCC 10500]
Length = 352
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYAAR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VLYD + G ++ + I RD + + KG+ FV + + A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGTLLSMPKIARD-DANLSKGYGFVSFADFDASDAA 158
Query: 89 IKLFSG 94
I G
Sbjct: 159 IANMHG 164
>gi|303275187|ref|XP_003056892.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461244|gb|EEH58537.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 302
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+GNLD E +L+++ +QAG VV++Y+P+D+ ++ +G+ FVE+ +EE Y
Sbjct: 5 NQDATIYVGNLDLACTEEILWEVFVQAGPVVNVYVPKDRVSNAHQGYGFVEFANEEDADY 64
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQN 116
AIK+ + ++ L+ + +R + QDK + +
Sbjct: 65 AIKVLN-MIKLHGKPVRVNKASQDKKSND 92
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
V NK +++ G N+++GNLD +++E++LYD G V+ I RD ++ +G
Sbjct: 79 VRVNKASQDKKSNDVGANLFVGNLDSELDEKLLYDTFSAFGVVITTPKIMRDPDSGNSRG 138
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
F FV Y+S E AI+ +G L NR ++ FA + ++ + L++ RS
Sbjct: 139 FGFVSYDSFEAADAAIEAMNGQF-LCNRPISVTFAYKKDTRGERHGTPAERMLAANMERS 197
>gi|432882405|ref|XP_004074014.1| PREDICTED: splicing factor 3B subunit 4-like [Oryzias latipes]
Length = 344
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S + AI+ +G L NR T+ +A K ++ S L+++
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQ 198
>gi|443900412|dbj|GAC77738.1| splicing factor 3b, subunit 4 [Pseudozyma antarctica T-34]
Length = 319
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 69/109 (63%), Gaps = 4/109 (3%)
Query: 5 PKHSFVPNDVVSRNKRQI-MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIP 63
P H ++P+ + R + N ++ C YIGNLDE+ + ++++++IQAG +V+L++P
Sbjct: 38 PDHVYLPHHKLGDMSRPPELDRNQDATC--YIGNLDERATDAIVWELMIQAGPLVNLHLP 95
Query: 64 RDKETDKPKGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDK 112
+D+ + +G+AF E+++E+ YA K+ +G+ LY + +R + D+
Sbjct: 96 KDRISQTHQGYAFAEFQTEQDADYACKVMNGL-KLYGKPIRVNKASNDR 143
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
S +++QI + G N+++G+LD V+E +LY+ G +V L + RD T +PKG
Sbjct: 139 ASNDRKQI-----DIGANLFVGSLDPAVDEHLLYETFSAFGNIVGLPKVARDPATGEPKG 193
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTL-YNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSD 132
+AFV ++S E A++ +G L N T+ +A+ KN + L + ++R +
Sbjct: 194 YAFVSFDSFEAADAAVEALNGQFLLNKNITVDYAIKKDSKNGERHGTAAERLLAAQARKN 253
Query: 133 PVPMPVNGMEISHHSMRISVPRHYSSEEPPPP 164
+P + H++ + S PPP
Sbjct: 254 NA-LPTQQYPPAPHALPQPYAQPPQSNGAPPP 284
>gi|212546197|ref|XP_002153252.1| splicing factor 3b subunit 4 [Talaromyces marneffei ATCC 18224]
gi|210064772|gb|EEA18867.1| splicing factor 3b subunit 4 [Talaromyces marneffei ATCC 18224]
Length = 351
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYAAR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V+E+VLYD + G ++ L I RD + + KG+ FV + + A
Sbjct: 100 GAELFVGNLDPMVSEQVLYDTFSRFGTLLSLPKIARD-DANLSKGYGFVSFADFDASDAA 158
Query: 89 I 89
I
Sbjct: 159 I 159
>gi|52694662|ref|NP_705947.3| splicing factor 3B subunit 4 [Danio rerio]
gi|34193906|gb|AAH56532.1| Splicing factor 3b, subunit 4 [Danio rerio]
gi|45768679|gb|AAH67655.1| Splicing factor 3b, subunit 4 [Danio rerio]
gi|94733748|emb|CAK11461.1| splicing factor 3b, subunit 4 [Danio rerio]
Length = 400
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S + AI+ +G L NR T+ +A K ++ S L+++
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQ 198
>gi|221508124|gb|EEE33711.1| splicing factor, putative [Toxoplasma gondii VEG]
Length = 576
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +YIGNLD +V++ +L+++ +Q G V + +PRDK T +G+ FVE+ +E Y
Sbjct: 26 NQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADY 85
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A+KL + +V LY + LR S QD+
Sbjct: 86 ALKLMN-MVKLYGKALRLNKSAQDR 109
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
N + G NV++GNLD V+E+ +YD G ++ I RD ET +GF FV +++ E
Sbjct: 111 NFDVGANVFLGNLDPDVDEKTIYDTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEAS 170
Query: 86 HYAIKLFSG 94
A+ +G
Sbjct: 171 DAALAAMNG 179
>gi|237833669|ref|XP_002366132.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211963796|gb|EEA98991.1| splicing factor, putative [Toxoplasma gondii ME49]
Length = 576
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +YIGNLD +V++ +L+++ +Q G V + +PRDK T +G+ FVE+ +E Y
Sbjct: 26 NQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADY 85
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A+KL + +V LY + LR S QD+
Sbjct: 86 ALKLMN-MVKLYGKALRLNKSAQDR 109
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
N + G NV++GNLD V+E+ +YD G ++ I RD ET +GF FV +++ E
Sbjct: 111 NFDVGANVFLGNLDPDVDEKTIYDTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEAS 170
Query: 86 HYAIKLFSG 94
A+ +G
Sbjct: 171 DAALAAMNG 179
>gi|221486340|gb|EEE24601.1| splicing factor, putative [Toxoplasma gondii GT1]
Length = 576
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +YIGNLD +V++ +L+++ +Q G V + +PRDK T +G+ FVE+ +E Y
Sbjct: 26 NQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADY 85
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A+KL + +V LY + LR S QD+
Sbjct: 86 ALKLMN-MVKLYGKALRLNKSAQDR 109
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
N + G NV++GNLD V+E+ +YD G ++ I RD ET +GF FV +++ E
Sbjct: 111 NFDVGANVFLGNLDPDVDEKTIYDTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEAS 170
Query: 86 HYAIKLFSG 94
A+ +G
Sbjct: 171 DAALAAMNG 179
>gi|255931581|ref|XP_002557347.1| Pc12g04780 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581966|emb|CAP80105.1| Pc12g04780 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 366
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V++ +++++++Q GR+V++++P+D+ T +G+ FVE+ SEE YA K
Sbjct: 13 ATVYIGNLDERVSDSLVWELMLQVGRIVNVHLPKDRVTQLHQGYGFVEFISEEDAEYASK 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ +GI L+ + +R + DK
Sbjct: 73 IMNGI-RLHGKPIRVNKASADKQ 94
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VL+D + G +V+ I RD + + KG+ FV + E A
Sbjct: 100 GAELFVGNLDPMVAEQVLFDTFSRFGNLVNPPKIARD-DNNLSKGYGFVSFADFESSDAA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 IANMNG 164
>gi|428161292|gb|EKX30760.1| hypothetical protein GUITHDRAFT_123023 [Guillardia theta CCMP2712]
Length = 209
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+GN+ EK E +L+++ +QAG VV+++IPRDK T GF FVE+ SEE Y
Sbjct: 12 NQDATIYVGNITEKCTEEILWELFLQAGPVVNVHIPRDKVTTVHSGFGFVEFRSEEDAEY 71
Query: 88 AIKLFSGIVTLYNRTLRF 105
AIK+ + ++ L+ + LR
Sbjct: 72 AIKIMN-MIKLHGQPLRL 88
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVD--LYIPRDKETDKPKGFAFVEYESEEIGHY 87
G N++IGNL+ +V+E++LYD G +V RD ET + KGFAFV Y+ E
Sbjct: 102 GANLFIGNLEPEVDEKLLYDTFSAFGVIVGNTPKCMRDPETGQSKGFAFVNYDCFEAADM 161
Query: 88 AIKLFSG 94
AI+ +G
Sbjct: 162 AIEAMNG 168
>gi|405961983|gb|EKC27707.1| Splicing factor 3B subunit 4 [Crassostrea gigas]
Length = 405
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G+LD+KV E +L+++ +QAG VV++++P+D+ T +G+ FVE+ EE Y
Sbjct: 10 NQDATVYVGSLDDKVTEAILWELFLQAGPVVNVHMPKDRVTQSHQGYGFVEFMGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSS 118
+ + S E A++ +G L NR ++ FA K ++ S
Sbjct: 147 INFASFEAADAALEAMNGQF-LCNRAISISFAFKKDSKGERHGS 189
>gi|348513245|ref|XP_003444153.1| PREDICTED: splicing factor 3B subunit 4-like [Oreochromis
niloticus]
Length = 401
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S + AI+ +G L NR T+ +A K ++ S L+++
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQ 198
>gi|183230140|ref|XP_655332.2| splicing factor 3B subunit 4 [Entamoeba histolytica HM-1:IMSS]
gi|169803064|gb|EAL49944.2| splicing factor 3B subunit 4, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449710589|gb|EMD49637.1| splicing factor 3B subunit 4, putative [Entamoeba histolytica KU27]
Length = 199
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 56/74 (75%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
VY +LDEKV+E++LY+++IQAG VV++ IPRD+ +++ KG A+VE++ + YA+K+F
Sbjct: 17 VYCSDLDEKVDEQLLYELMIQAGPVVNISIPRDRISNQHKGVAYVEFQHDYDADYAVKVF 76
Query: 93 SGIVTLYNRTLRFA 106
+ LY + ++F+
Sbjct: 77 GDNIKLYGKQVKFS 90
>gi|295669139|ref|XP_002795118.1| spliceosome associated protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285811|gb|EEH41377.1| spliceosome associated protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 389
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYAAR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ + V LY + +R + DK+
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKH 94
Score = 39.7 bits (91), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G ++IGNLD V E++LYD + G ++ I RD + + KG+ FV + + E A
Sbjct: 100 GAELFIGNLDPMVTEQILYDTFSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 IANMNG 164
>gi|301097256|ref|XP_002897723.1| splicing factor 3B subunit 4 [Phytophthora infestans T30-4]
gi|262106744|gb|EEY64796.1| splicing factor 3B subunit 4 [Phytophthora infestans T30-4]
Length = 188
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+GNLD++V E +L+++++Q+G V ++++PRDK T + + FVE+ +E+ Y
Sbjct: 9 NQDATVYVGNLDDRVTEELLWELMLQSGSVCNVHMPRDKVTGAHQNYGFVEFRTEDCAEY 68
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A+K+ + ++ LY R +R + D+
Sbjct: 69 AVKVLN-MIQLYGRVIRVKKASNDR 92
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 84
N + G N++IGNLD +V+E++LYD G +V+ I RD +T KGF FV ++S E
Sbjct: 94 NLDVGANLFIGNLDPEVDEKLLYDTFSAFGGIVETPKIMRDPDTKASKGFGFVSFDSFEA 153
Query: 85 GHYAIKLFSG--IVTLYNRTLR 104
AI+ G + + N T R
Sbjct: 154 ADLAIECMHGQYLTVIMNVTAR 175
>gi|401409932|ref|XP_003884414.1| putative splicing factor [Neospora caninum Liverpool]
gi|325118832|emb|CBZ54384.1| putative splicing factor [Neospora caninum Liverpool]
Length = 550
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +YIGNLD +V++ +L+++ +Q G V + +PRDK T +G+ FVE+ +E Y
Sbjct: 26 NQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFTNEVDADY 85
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A+KL + +V LY ++LR S QD+
Sbjct: 86 ALKLMN-MVKLYGKSLRLNKSAQDR 109
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
N + G N+++GNLD V+E+ +YD G ++ I RD ET +GF FV +++ E
Sbjct: 111 NFDVGANIFLGNLDPDVDEKTIYDTFSTFGNILTAKIMRDPETGISRGFGFVSFDTFEAS 170
Query: 86 HYAIKLFSG 94
A+ +G
Sbjct: 171 DAALAAMNG 179
>gi|407922777|gb|EKG15869.1| hypothetical protein MPH_06834 [Macrophomina phaseolina MS6]
Length = 379
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
VY+GNLDE+V +R+++++++Q GR+ ++++P+D+ T +G+ FVE++SEE YA K+
Sbjct: 15 TVYVGNLDERVTDRLVWELMLQVGRIQNVHLPKDRVTQTHQGYGFVEFQSEEEADYAAKI 74
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+ I LY + +R + DK
Sbjct: 75 MNQI-RLYGKPIRVNKASADKQ 95
Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V+E+VL+D + G +V + RD E + KG+ FV + + E A
Sbjct: 101 GAELFVGNLDPMVDEKVLFDCFSRFGSLVSAPKVARD-ENNLSKGYGFVSFATFESSDDA 159
Query: 89 IKLFSG 94
I +G
Sbjct: 160 IANMNG 165
>gi|52547949|gb|AAM28203.2| splicing factor 3b subunit 4 [Danio rerio]
Length = 400
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDAAVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S + AI+ +G L NR T+ +A K ++ S L+++
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQ 198
>gi|308510552|ref|XP_003117459.1| CRE-SAP-49 protein [Caenorhabditis remanei]
gi|308242373|gb|EFO86325.1| CRE-SAP-49 protein [Caenorhabditis remanei]
Length = 389
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LDEKV+E +L+++++QAG VV + +P+D+ T +GF FVE+ EE Y
Sbjct: 10 NQDATIYVGGLDEKVSEAILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + ++
Sbjct: 70 AIKILN-MIKLYGKPIK 85
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 18/175 (10%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
+ NK N + G N+++GNLD +V+E++LYD G ++ + I RD ++ KG
Sbjct: 84 IKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKG 143
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR---- 127
FAF+ + S E A++ +G L NR T+ +A K ++ + L+++
Sbjct: 144 FAFINFASFEASDTALEAMNGQF-LCNRAITVSYAFKRDSKGERHGTAAERMLAAQNPLF 202
Query: 128 -KSR-----SD-PVPMPVNGMEISHHSMRISVPRHYSSEE--PPPPGVTLETNGY 173
K R SD P+ +P N ++ + ++ H + PPP + + TNGY
Sbjct: 203 PKDRPHQVFSDVPLGVPAN-TPLAIPGVHAAIAAHATGRPGYQPPPLMGMPTNGY 256
>gi|159163578|pdb|1X5U|A Chain A, Solution Structure Of Rrm Domain In Splicing Factor 3b
Length = 105
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 13 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 72
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ ++ LY + +R
Sbjct: 73 AIKIMD-MIKLYGKPIR 88
>gi|115532084|ref|NP_001021932.1| Protein SAP-49 [Caenorhabditis elegans]
gi|55977846|sp|Q09442.2|SF3B4_CAEEL RecName: Full=Splicing factor 3B subunit 4; AltName:
Full=Spliceosome-associated protein 49
gi|50511896|emb|CAB60993.2| Protein SAP-49 [Caenorhabditis elegans]
Length = 388
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LDEKV+E +L+++++QAG VV + +P+D+ T +GF FVE+ EE Y
Sbjct: 10 NQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + ++
Sbjct: 70 AIKILN-MIKLYGKPIK 85
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
+ NK N + G N+++GNLD +V+E++LYD G ++ + I RD ++ KG
Sbjct: 84 IKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKG 143
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR---- 127
FAF+ + S E A++ +G L NR T+ +A K ++ + L+++
Sbjct: 144 FAFINFASFEASDTALEAMNGQF-LCNRAITVSYAFKRDSKGERHGTAAERMLAAQNPLF 202
Query: 128 -KSR-----SD-PVPMPVNGMEISHHSMRISVPRHYSSEE--PPPPGVTLETNGYE 174
K R SD P+ +P N ++ + ++ H + PPP + + +GY+
Sbjct: 203 PKDRPHQVFSDVPLGVPAN-TPLAMPGVHAAIAAHATGRPGYQPPPLMGMAQSGYQ 257
>gi|345567290|gb|EGX50224.1| hypothetical protein AOL_s00076g299 [Arthrobotrys oligospora ATCC
24927]
Length = 385
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V + +++++++QAGR+ ++++P+D+ T +GF FVE+ SEE YA +
Sbjct: 12 ATVYIGNLDERVTDALVWELMLQAGRISNVHLPKDRVTQTHQGFGFVEFVSEEDAEYAAR 71
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ + I LY + +R + DK
Sbjct: 72 IMNQI-RLYGKPIRVNKASADKQ 93
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRV-VDLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G ++IGNLD V+E+ LYD + G + I RD E +GF FV++++ E A
Sbjct: 99 GAELFIGNLDSMVDEKTLYDTFMTFGTITAPPKIARD-EAGISRGFGFVQFDNFESSDKA 157
Query: 89 IKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRSD------PVPMPVNG 140
I G L N+ ++ +A K ++ L+S+ +++ P+P + G
Sbjct: 158 IDAMQGQY-LMNKEISVSYAFKKDGKGERHGDQAERLLASQARKNNVQVQVQPLPSALLG 216
Query: 141 MEIS 144
+++
Sbjct: 217 QQVA 220
>gi|341882220|gb|EGT38155.1| hypothetical protein CAEBREN_32522 [Caenorhabditis brenneri]
gi|341882722|gb|EGT38657.1| hypothetical protein CAEBREN_06124 [Caenorhabditis brenneri]
Length = 388
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LDEKV+E +L+++++QAG VV + +P+D+ T +GF FVE+ EE Y
Sbjct: 10 NQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + ++
Sbjct: 70 AIKILN-MIKLYGKPIK 85
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
+ NK N + G N+++GNLD +V+E++LYD G ++ + I RD ++ KG
Sbjct: 84 IKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKG 143
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
FAF+ + S E A++ +G L NR T+ +A K ++ + L+++
Sbjct: 144 FAFINFASFEASDTALEAMNGQF-LCNRAITVSYAFKRDSKGERHGTAAERMLAAQ 198
>gi|1002380|gb|AAC47514.1| RRM-type RNA binding protein [Caenorhabditis elegans]
Length = 398
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LDEKV+E +L+++++QAG VV + +P+D+ T +GF FVE+ EE Y
Sbjct: 20 NQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADY 79
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + ++
Sbjct: 80 AIKILN-MIKLYGKPIK 95
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
+ NK N + G N+++GNLD +V+E++LYD G ++ + I RD ++ KG
Sbjct: 94 IKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKG 153
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR---- 127
FAF+ + S E A++ +G L NR T+ +A K ++ + L+++
Sbjct: 154 FAFINFASFEASDTALEAMNGQF-LCNRAITVSYAFKRDSKGERHGTAAERMLAAQNPLF 212
Query: 128 -KSR-----SD-PVPMPVNGMEISHHSMRISVPRHYSSEE--PPPPGVTLETNGYE 174
K R SD P+ +P N ++ + ++ H + PPP + + +GY+
Sbjct: 213 PKDRPHQVFSDVPLGVPAN-TPLAMPGVHAAIAAHATGRPGYQPPPLMGMAQSGYQ 267
>gi|301789695|ref|XP_002930273.1| PREDICTED: splicing factor 3B subunit 4-like, partial [Ailuropoda
melanoleuca]
Length = 252
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S + AI+ +G L NR T+ +A K ++ S L+++
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQ 198
>gi|115686233|ref|XP_784135.2| PREDICTED: splicing factor 3B subunit 4-like [Strongylocentrotus
purpuratus]
Length = 425
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV E +L+++ +QAG VV+ ++P+D+ T +G+ FVE+ EE Y
Sbjct: 10 NQDATVYVGGLDEKVTEALLWELFLQAGPVVNTHMPKDRVTQSHQGYGFVEFMGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKVLN-MIKLYGKPVR 85
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
V NK N + G N++IGNLD +++E++LYD G ++ I RD E+ KG
Sbjct: 84 VRVNKASAHQKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDVESGNSKG 143
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+AF+ + S E AI+ +G L NR T+ FA + ++ S L+++
Sbjct: 144 YAFINFASFEAADAAIEAMNGQY-LCNRAITISFAFKKDSRGERHGSAAERLLAAQ 198
>gi|226290828|gb|EEH46282.1| spliceosome associated protein [Paracoccidioides brasiliensis Pb18]
Length = 390
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYAAR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G ++IGNLD V E++LYD + G ++ I RD + + KG+ FV + + E A
Sbjct: 100 GAELFIGNLDPMVTEQILYDTFSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 IANMNG 164
>gi|378730244|gb|EHY56703.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 345
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
+YIGNLDE+V + +++++ +QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 STIYIGNLDERVTDALVWELFLQAGRIVNVHLPKDRVTQTHQGYGFVEFTSEEDAEYAAR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V+ER+LY+ + G +V I RD E + KG+ FV + E A
Sbjct: 100 GAELFVGNLDPMVDERMLYETFGRFGTLVAAPKIARD-ENNLSKGYGFVSFADFESSDDA 158
Query: 89 IKLFSGIVTLYNR--TLRFAL----SGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNG 140
I +G L N+ T+++A G+ Q M + + P +P+ G
Sbjct: 159 IANMNGQY-LMNKEVTVQYAYKKDGKGERHGDQAERMLAAQAKAHGVQPTPATIPLGG 215
>gi|71021191|ref|XP_760826.1| hypothetical protein UM04679.1 [Ustilago maydis 521]
gi|46100200|gb|EAK85433.1| hypothetical protein UM04679.1 [Ustilago maydis 521]
Length = 294
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N YIGN+D++ N+ ++++++IQAG +V+L++P+D+ T +G+AF E+++E+ Y
Sbjct: 10 NQDATCYIGNIDDRANDAIVWELMIQAGPLVNLHLPKDRITQSHQGYAFAEFQTEQDADY 69
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A K+ +G+ LY + +R + D+
Sbjct: 70 ACKVMNGL-KLYGKPIRVNKASNDR 93
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N+++G+LD V+ER+LY+ G ++ L I RD + +PKGFAFV ++S E A
Sbjct: 99 GANLFVGSLDPAVDERLLYETFSAFGGIIGLPKIARDPTSGEPKGFAFVSFDSFEAADAA 158
Query: 89 IKLFSGIVTL-YNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSD 132
I+ +G L N T+ +A+ KN + L + ++R +
Sbjct: 159 IEALNGQFLLNKNITVDYAIKKDSKNGERHGTAAERLLAAQARKN 203
>gi|320164028|gb|EFW40927.1| splicing factor 3B subunit 4 [Capsaspora owczarzaki ATCC 30864]
Length = 283
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
N N Y+GNLD++VN+R+L+++ +QAG V ++IP+D+ + +G+ FVEY +EE
Sbjct: 7 NRNQDATCYVGNLDDRVNDRLLWELFLQAGPVAHVFIPKDRVSGLQQGYGFVEYPTEEDA 66
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDKN 113
YA K+ + ++ L+ + +R + S K+
Sbjct: 67 EYATKILN-MIKLFGKPIRVSRSTDRKD 93
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD +V+E++L+D G ++ I RD++ P+GF FV + S E A
Sbjct: 97 GANLFIGNLDTEVDEKMLFDTFSAFGVILHTPKIMRDQQNGNPRGFGFVNFASFEASDAA 156
Query: 89 IKLFSG 94
I+ +G
Sbjct: 157 IEAMNG 162
>gi|268529722|ref|XP_002629987.1| C. briggsae CBR-SAP-49 protein [Caenorhabditis briggsae]
Length = 370
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LDEKV+E +L+++++QAG VV + +P+D+ T +GF FVE+ EE Y
Sbjct: 10 NQDATIYVGGLDEKVSEAILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLRF-ALSGQDKN 113
AIK+ + ++ LY + ++ S +KN
Sbjct: 70 AIKILN-MIKLYGKPIKVNKASAHEKN 95
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 18/175 (10%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
+ NK N + G N+++GNLD +V+E++LYD G ++ + I RD ++ KG
Sbjct: 84 IKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKG 143
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR---- 127
FAF+ + S E ++ G L NR T+ +A K ++ + L+S+
Sbjct: 144 FAFINFASFEASDRGLEAMRGQF-LCNRAITVSYAFKRDSKGERHGTAAERMLASQNPLF 202
Query: 128 -KSR-----SD-PVPMPVNGMEISHHSMRISVPRHYSSEE--PPPPGVTLETNGY 173
K R SD P+ +P N ++ + ++ H + PPP + + NGY
Sbjct: 203 PKDRPHQVFSDVPLGVPAN-TPLAIPGVHAAIAAHATGRPGYQPPPLMGMPANGY 256
>gi|325094983|gb|EGC48293.1| splicing factor 3B [Ajellomyces capsulatus H88]
Length = 387
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE++ + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERITDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYAAR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VLYD + G ++ I RD + + KG+ FV + + E A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 IANMNG 164
>gi|260940088|ref|XP_002614344.1| hypothetical protein CLUG_05830 [Clavispora lusitaniae ATCC 42720]
gi|238852238|gb|EEQ41702.1| hypothetical protein CLUG_05830 [Clavispora lusitaniae ATCC 42720]
Length = 222
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 20 RQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY 79
R+ N +VY+GNLD +V+E +LY++ IQAG V L++P+D+ + + +GF FVE+
Sbjct: 5 RKPSEAEKNPHASVYVGNLDPQVSETLLYELFIQAGPVRSLHLPKDRISREHQGFGFVEF 64
Query: 80 ESEEIGHYAIKLFSGIVTLYNRTLR 104
+ + YA++LF G V L+ RTL+
Sbjct: 65 RTAQDADYAVELFRG-VRLFGRTLK 88
Score = 36.2 bits (82), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G +++GNL+ V+E+ L + + G +V + E PKG FVE+ E A+
Sbjct: 108 GARLFVGNLNPLVDEQYLRETFNKFGALVGRPVLARDENGTPKGHGFVEFSDFESSDDAL 167
Query: 90 KLFSGIVTLYNRT-LRFALSGQDKN 113
+G + + +R + +A DK+
Sbjct: 168 SKMNGAILMNSRIKVEYAYKDGDKH 192
>gi|407037930|gb|EKE38853.1| splicing factor 3B subunit 4, putative [Entamoeba nuttalli P19]
Length = 199
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 56/74 (75%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
VY +LDEKV+E++LY+++IQAG V+++ IPRD+ +++ KG A+VE++ + YA+K+F
Sbjct: 17 VYCSDLDEKVDEQLLYELMIQAGPVINISIPRDRISNQHKGVAYVEFQHDYDADYAVKVF 76
Query: 93 SGIVTLYNRTLRFA 106
+ LY + ++F+
Sbjct: 77 GDNIKLYGKQVKFS 90
>gi|225554276|gb|EEH02576.1| splicing factor 3b subunit 4 [Ajellomyces capsulatus G186AR]
Length = 387
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE++ + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERITDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYAAR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VLYD + G ++ I RD + + KG+ FV + + E A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 IANMNG 164
>gi|154276886|ref|XP_001539288.1| hypothetical protein HCAG_06893 [Ajellomyces capsulatus NAm1]
gi|150414361|gb|EDN09726.1| hypothetical protein HCAG_06893 [Ajellomyces capsulatus NAm1]
Length = 387
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE++ + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERITDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYAAR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VLYD + G ++ I RD + + KG+ FV + + E A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 IANMNG 164
>gi|196007894|ref|XP_002113813.1| hypothetical protein TRIADDRAFT_26280 [Trichoplax adhaerens]
gi|190584217|gb|EDV24287.1| hypothetical protein TRIADDRAFT_26280 [Trichoplax adhaerens]
Length = 291
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+GNLDEKV+E +L+++ +QAG VV++++P+D+ T +G+ F+E+ E+ Y
Sbjct: 10 NQDATIYVGNLDEKVSETLLWELFLQAGPVVNVHMPKDRITQAHQGYGFIEFLGEDDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G NV+IGNLD +V+E+ LYD G ++ I RD ET + KGFAF
Sbjct: 87 NKASAHNKNLDVGANVFIGNLDPEVDEKQLYDTFSAFGVILQTPKIMRDPETGQSKGFAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNRTLR--FALSGQDKNAQNSSMTTTPLSSR 127
+ + S + A++ +G L NRT+ +A K ++ S L+++
Sbjct: 147 INFASFDASDAAMEAMNGQF-LCNRTINVSYAFKKDSKGERHGSAAERLLAAQ 198
>gi|297831910|ref|XP_002883837.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329677|gb|EFH60096.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 365
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+GNL +++E +L ++ +QAG VV ++IP+DK T+ + F FV++ +EE Y
Sbjct: 22 NQDATIYVGNLSPQLSEDLLLELFVQAGPVVSVFIPKDKVTNLQQTFGFVQFRNEEDADY 81
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNA 114
AIK+++ ++ LY +R + QDK +
Sbjct: 82 AIKVYN-MIKLYGEPIRVKKASQDKKS 107
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD V+E++LYD G V D I RD +T P+GF F+ Y+S E A
Sbjct: 111 GANLFIGNLDPDVDEKMLYDTFSAFGMVADHPKIMRDPDTGNPRGFGFISYDSFEASDAA 170
Query: 89 IKLFSG 94
I+ SG
Sbjct: 171 IEAMSG 176
>gi|145347251|ref|XP_001418087.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578315|gb|ABO96380.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 319
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N+ VY+GNLD +V E VL+++ +QAG V ++Y+P+D+ T +G+ FVE+ +EE Y
Sbjct: 26 NAEATVYVGNLDPQVTEEVLWELFLQAGPVTNVYVPKDRVTSTHQGYGFVEFRNEEDAEY 85
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
IK+ + +V L+ + ++ S D+
Sbjct: 86 GIKILN-MVKLFGKPIKVNKSVGDR 109
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD ++E++LYD G V++ I RD + KGF FV Y+S E A
Sbjct: 114 GANLFIGNLDPDIDEKLLYDTFSAFGVVINTPKIMRDPDNGASKGFGFVAYDSFEASDAA 173
Query: 89 IKLFSG 94
I+ +G
Sbjct: 174 IEAMNG 179
>gi|258569671|ref|XP_002543639.1| splicing factor 3B subunit 4 [Uncinocarpus reesii 1704]
gi|237903909|gb|EEP78310.1| splicing factor 3B subunit 4 [Uncinocarpus reesii 1704]
Length = 348
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VY+GNLDE+V + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYVGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYASR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VLYD + G ++ + + RD + + KG+ FV + + E A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGSLISMPKVARD-DANLSKGYGFVSFANFEASDDA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 IANMNG 164
>gi|239608889|gb|EEQ85876.1| spliceosome-associated protein 49 [Ajellomyces dermatitidis ER-3]
Length = 383
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYAAR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VLYD + G ++ I RD + + KG+ FV + + E A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 IANMNG 164
>gi|261187642|ref|XP_002620240.1| spliceosome-associated protein 49 [Ajellomyces dermatitidis
SLH14081]
gi|239594131|gb|EEQ76712.1| spliceosome-associated protein 49 [Ajellomyces dermatitidis
SLH14081]
gi|327357210|gb|EGE86067.1| splicing factor 3b subunit 4 [Ajellomyces dermatitidis ATCC 18188]
Length = 383
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYAAR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VLYD + G ++ I RD + + KG+ FV + + E A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 IANMNG 164
>gi|241708466|ref|XP_002403282.1| spliceosome associated protein, putative [Ixodes scapularis]
gi|215505045|gb|EEC14539.1| spliceosome associated protein, putative [Ixodes scapularis]
Length = 408
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LDEKV++ +L+++ +QAG VV++++P+D+ T +G+ FVE+ EE Y
Sbjct: 10 NQDATIYVGGLDEKVSDTILWELFVQAGPVVNVHMPKDRVTGHHQGYGFVEFLGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S E AI+ +G L NR T+ +A K ++ S L+++
Sbjct: 147 INFASFEASDAAIEAMNG-QYLCNRAITISYAFKKDSKGERHGSAAERLLAAQ 198
>gi|119196451|ref|XP_001248829.1| hypothetical protein CIMG_02600 [Coccidioides immitis RS]
gi|392861968|gb|EAS37425.2| splicing factor 3b subunit 4 [Coccidioides immitis RS]
Length = 347
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VY+GNLDE+V + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYVGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYASR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDK 112
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADK 93
Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VLYD + G ++ + + RD + + KG+ FV + + E A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGPLISMPKVARD-DANLSKGYGFVSFANFEASDDA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 IANMNG 164
>gi|452820612|gb|EME27652.1| splicing factor 3B subunit 4 [Galdieria sulphuraria]
Length = 265
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+GNLDE+V+E +L+++++Q G V +YIPRD+ T + +G+ FVE+++E Y
Sbjct: 20 NQEATLYVGNLDERVSEELLWELMVQVGPVKHVYIPRDRITGQTQGYGFVEFKNEMDAIY 79
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQN 116
A K+ + +V +Y + LR + DK + +
Sbjct: 80 ATKVLN-MVRVYAKPLRLQQASTDKRSMD 107
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N+++GNL ++V+E++LYD G +++ +I RD ET + KG+ F++++S E A
Sbjct: 109 GANLFVGNLSQEVDEKLLYDTFSAFGAIIETPHIMRDPETGESKGYGFIKFDSFEASDAA 168
Query: 89 IKLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSR 127
I+ +G N+ T+++A +D ++ S L++R
Sbjct: 169 IETMNGQFLGNNQVTVQYAFK-KDTKERHGSQAERILAAR 207
>gi|256083494|ref|XP_002577978.1| splicing factor 3b subunit 4 (fragment) [Schistosoma mansoni]
gi|350645079|emb|CCD60205.1| splicing factor 3b, subunit 4 (fragment),putative [Schistosoma
mansoni]
Length = 344
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LDEKVNE +L+++ +QAG VV++++P+D+ + +G+ FVE+ +EE Y
Sbjct: 10 NQDATIYVGGLDEKVNESILWELFLQAGPVVNVHMPKDRINMQHQGYGFVEFMTEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
A+++ + ++ LY + +R
Sbjct: 70 AMRIMN-MIKLYGKPIR 85
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET KG+AF
Sbjct: 87 NKASANQKNLDIGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S E AI+ +G L NR T+ +A K ++ S L+++
Sbjct: 147 INFASFEASDAAIEAMNG-QYLCNRAITISYAFKKDSKGERHGSAAERLLAAQ 198
>gi|225683056|gb|EEH21340.1| spliceosome-associated protein [Paracoccidioides brasiliensis Pb03]
Length = 200
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE+V + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYAAR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDK 112
+ + V LY + +R + DK
Sbjct: 73 IMNQ-VRLYGKPIRVNKASADK 93
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G ++IGNLD V E++LYD + G ++ I RD + + KG+ FV + + E A
Sbjct: 100 GAELFIGNLDPMVTEQILYDTFSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 IANMNG 164
>gi|320040614|gb|EFW22547.1| splicing factor 3b subunit 4 [Coccidioides posadasii str. Silveira]
Length = 347
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VY+GNLDE+V + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYVGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYASR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDK 112
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADK 93
Score = 40.0 bits (92), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VLYD + G ++ + + RD + + KG+ FV + + E A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGPLISMPKVARD-DANLSKGYGFVSFANFEASDDA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 IANMNG 164
>gi|240277045|gb|EER40555.1| splicing factor 3b subunit 4 [Ajellomyces capsulatus H143]
Length = 247
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGNLDE++ + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNLDERITDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYAAR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ + V LY + +R + DK
Sbjct: 73 IMNQ-VRLYGKPIRVNKASADKQ 94
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VLYD + G ++ I RD + + KG+ FV + + E A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 IANMNG 164
>gi|194762578|ref|XP_001963411.1| GF20385 [Drosophila ananassae]
gi|190629070|gb|EDV44487.1| GF20385 [Drosophila ananassae]
Length = 341
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y G LD+KV+E +L+++ +QAG VV++++P+D+ T +G+ FVE+ SEE Y
Sbjct: 10 NQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET K K FAF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S E A+ +G L NR ++ +A K ++ S L+++
Sbjct: 147 INFASFEASDAAMDAMNG-QYLCNRPISVSYAFKKDHKGERHGSAAERLLAAQ 198
>gi|154294661|ref|XP_001547770.1| hypothetical protein BC1G_13457 [Botryotinia fuckeliana B05.10]
Length = 381
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGN+DE+V + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 14 ATVYIGNIDERVTDSLVWELMLQAGRIVNVHLPKDRVTQNHQGYGFVEFISEEDAEYAAR 73
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ + V L+ + +R + DK
Sbjct: 74 IMN-QVRLFGKPIRVNKASADKQ 95
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G ++IGNLD V+E+ LYD + G ++ I RD E+ KG+ FV Y + E A
Sbjct: 101 GAELFIGNLDPMVDEKTLYDTFSRFGSLISPPKIARD-ESSLSKGYGFVSYANFEASDDA 159
Query: 89 IKLFSG 94
I +G
Sbjct: 160 IANMNG 165
>gi|303322388|ref|XP_003071187.1| Splicing factor 3B subunit 4 , putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240110886|gb|EER29042.1| Splicing factor 3B subunit 4 , putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 347
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VY+GNLDE+V + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYVGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYASR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDK 112
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADK 93
Score = 40.0 bits (92), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VLYD + G ++ + + RD + + KG+ FV + + E A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGPLISMPKVARD-DANLSKGYGFVSFANFEASDDA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 IANMNG 164
>gi|156048690|ref|XP_001590312.1| hypothetical protein SS1G_09077 [Sclerotinia sclerotiorum 1980]
gi|154693473|gb|EDN93211.1| hypothetical protein SS1G_09077 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 380
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGN+DE+V + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 12 ATVYIGNIDERVTDSLVWELMLQAGRIVNVHLPKDRVTQNHQGYGFVEFISEEDAEYAAR 71
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ + V L+ + +R + DK
Sbjct: 72 IMN-QVRLFGKPIRVNKASADKQ 93
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G ++IGNLD V+E+ LYD + G ++ I RD E+ KG+ FV Y + E A
Sbjct: 99 GAELFIGNLDPMVDEKTLYDTFSRFGSLISPPKIARD-ESSLSKGYGFVSYANFEASDDA 157
Query: 89 IKLFSG 94
I +G
Sbjct: 158 IANMNG 163
>gi|347841404|emb|CCD55976.1| hypothetical protein [Botryotinia fuckeliana]
Length = 380
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGN+DE+V + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYIGNIDERVTDSLVWELMLQAGRIVNVHLPKDRVTQNHQGYGFVEFISEEDAEYAAR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ + V L+ + +R + DK
Sbjct: 73 IMN-QVRLFGKPIRVNKASADKQ 94
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G ++IGNLD V+E+ LYD + G ++ I RD E+ KG+ FV Y + E A
Sbjct: 100 GAELFIGNLDPMVDEKTLYDTFSRFGSLISPPKIARD-ESSLSKGYGFVSYANFEASDDA 158
Query: 89 IKLFSG 94
I +G
Sbjct: 159 IANMNG 164
>gi|195174722|ref|XP_002028121.1| GL21313 [Drosophila persimilis]
gi|194115861|gb|EDW37904.1| GL21313 [Drosophila persimilis]
Length = 341
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y G LD+KV+E +L+++ +QAG VV++++P+D+ T +G+ FVE+ SEE Y
Sbjct: 10 NQDATIYAGGLDDKVSESLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET K K FAF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S E A+ +G L NR ++ +A K ++ S L+++
Sbjct: 147 INFASFEASDAAMDAMNG-QYLCNRPISVSYAFKKDHKGERHGSAAERLLAAQ 198
>gi|167539870|ref|XP_001741392.1| splicing factor 3B subunit [Entamoeba dispar SAW760]
gi|165894094|gb|EDR22178.1| splicing factor 3B subunit, putative [Entamoeba dispar SAW760]
Length = 199
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 55/74 (74%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
VY +LDEKV+E++LY+++IQAG VV++ IPRD+ +++ KG +VE++ + YA+K+F
Sbjct: 17 VYCSDLDEKVDEQLLYELMIQAGPVVNVSIPRDRISNQHKGIGYVEFQHDYDADYAVKVF 76
Query: 93 SGIVTLYNRTLRFA 106
+ LY + ++F+
Sbjct: 77 GDNIKLYGKQVKFS 90
>gi|125982457|ref|XP_001355096.1| GA17684 [Drosophila pseudoobscura pseudoobscura]
gi|54643408|gb|EAL32152.1| GA17684 [Drosophila pseudoobscura pseudoobscura]
Length = 341
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y G LD+KV+E +L+++ +QAG VV++++P+D+ T +G+ FVE+ SEE Y
Sbjct: 10 NQDATIYAGGLDDKVSESLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET K K FAF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S E A+ +G L NR ++ +A K ++ S L+++
Sbjct: 147 INFASFEASDAAMDAMNG-QYLCNRPISVSYAFKKDHKGERHGSAAERLLAAQ 198
>gi|440632279|gb|ELR02198.1| hypothetical protein GMDG_00991 [Geomyces destructans 20631-21]
Length = 352
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VY+GN+DE+V + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA +
Sbjct: 13 ATVYVGNIDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYAAR 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ + V LY + +R + DK
Sbjct: 73 VMNQ-VRLYGKPIRVNKASADKQ 94
Score = 40.4 bits (93), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N+++GNL ++E LYD + G ++ I RD T KG+AF+ Y S + A
Sbjct: 100 GANLFLGNLSPHLDEHSLYDTFSRFGALLAPPKIARDPTTALSKGYAFLSYASFDAADDA 159
Query: 89 IKLFSGIVTLYNRTL 103
+ G TL +R +
Sbjct: 160 VANMHG-QTLLDRAI 173
>gi|195060144|ref|XP_001995761.1| GH17589 [Drosophila grimshawi]
gi|193896547|gb|EDV95413.1| GH17589 [Drosophila grimshawi]
Length = 340
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y G LD+KV+E +L+++ +QAG VV++++P+D+ T +G+ FVE+ SEE Y
Sbjct: 10 NQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET K KGFAF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKGFAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S E A+ +G L NR ++ +A K ++ S L+++
Sbjct: 147 INFASFEASDAAMDAMNG-QYLCNRPISVSYAFKKDHKGERHGSAAERLLAAQ 198
>gi|291224886|ref|XP_002732430.1| PREDICTED: splicing factor 3b, subunit 4-like [Saccoglossus
kowalevskii]
Length = 388
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +Q+G VV+ ++P+D+ T + +G+ FVE+ EE Y
Sbjct: 10 NQDATVYVGGLDEKVSEALLWELFLQSGPVVNTHMPKDRVTQQHQGYGFVEFLGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ +Y + +R
Sbjct: 70 AIKIMN-MIKIYGKPIR 85
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +++E++LYD G ++ I RD E+ KG+AF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPESGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S + AI+ +G L NR T+ +A K ++ S L+++
Sbjct: 147 INFASFDASDAAIEAMNGQY-LCNRPITISYAFKKDSKGERHGSAAERLLAAQ 198
>gi|194896158|ref|XP_001978424.1| GG19577 [Drosophila erecta]
gi|190650073|gb|EDV47351.1| GG19577 [Drosophila erecta]
Length = 339
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y G LD+KV+E +L+++ +QAG VV++++P+D+ T +G+ FVE+ SEE Y
Sbjct: 10 NQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET K K FAF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S E A+ +G L NR ++ +A K ++ S L+++
Sbjct: 147 INFASFEASDAAMDAMNG-QYLCNRPISVSYAFKKDHKGERHGSAAERLLAAQ 198
>gi|195469914|ref|XP_002099881.1| GE16738 [Drosophila yakuba]
gi|194187405|gb|EDX00989.1| GE16738 [Drosophila yakuba]
Length = 339
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y G LD+KV+E +L+++ +QAG VV++++P+D+ T +G+ FVE+ SEE Y
Sbjct: 10 NQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET K K FAF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S E A+ +G L NR ++ +A K ++ S L+++
Sbjct: 147 INFASFEASDAAMDAMNG-QYLCNRPISVSYAFKKDHKGERHGSAAERLLAAQ 198
>gi|195432797|ref|XP_002064403.1| GK19717 [Drosophila willistoni]
gi|194160488|gb|EDW75389.1| GK19717 [Drosophila willistoni]
Length = 339
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y G LD+KV+E +L+++ +QAG VV++++P+D+ T +G+ FVE+ SEE Y
Sbjct: 10 NQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ + RD ET K KGFAF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKLMRDPETGKSKGFAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S E A+ +G L NR ++ +A K ++ S L+++
Sbjct: 147 INFASFEASDAAMDAMNG-QYLCNRPISVSYAFKKDHKGERHGSAAERLLAAQ 198
>gi|195399065|ref|XP_002058141.1| GJ15655 [Drosophila virilis]
gi|194150565|gb|EDW66249.1| GJ15655 [Drosophila virilis]
Length = 340
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y G LD+KV+E +L+++ +QAG VV++++P+D+ T +G+ FVE+ SEE Y
Sbjct: 10 NQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET K KGFAF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKGFAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S E A+ +G L NR ++ +A K ++ S L+++
Sbjct: 147 INFASFEASDAAMDAMNG-QYLCNRPISVSYAFKKDHKGERHGSAAERLLAAQ 198
>gi|195133204|ref|XP_002011029.1| GI16317 [Drosophila mojavensis]
gi|193907004|gb|EDW05871.1| GI16317 [Drosophila mojavensis]
Length = 340
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y G LD+KV+E +L+++ +QAG VV++++P+D+ T +G+ FVE+ SEE Y
Sbjct: 10 NQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET K KGFAF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKGFAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S E A+ +G L NR ++ +A K ++ S L+++
Sbjct: 147 INFASFEASDAAMDAMNG-QYLCNRPISVSYAFKKDHKGERHGSAAERLLAAQ 198
>gi|240848881|ref|NP_001155373.1| spliceosome associated protein-like [Acyrthosiphon pisum]
gi|239792048|dbj|BAH72409.1| ACYPI000210 [Acyrthosiphon pisum]
Length = 370
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LDEKV++ +++++ +QAG VV++++P+D+ T +G+ FVE+ +E+ Y
Sbjct: 10 NQDATIYVGGLDEKVSDTLMWELFVQAGPVVNVHMPKDRVTQSHQGYGFVEFLAEDDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G NV+IGNLD +V+E++LYD G ++ I RD +T KGFAF
Sbjct: 87 NKASAHQKNLDVGANVFIGNLDSEVDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGFAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNRTL 103
+ Y S E AI+ +G L NR +
Sbjct: 147 INYASFEASDAAIEAMNG-QHLCNRAV 172
>gi|388858107|emb|CCF48344.1| related to spliceosome-associated protein SAP-49 [Ustilago hordei]
Length = 297
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N YIGN+D++ + ++++++IQAG +V+L++P+D+ T +G+AF E+++E+ Y
Sbjct: 10 NQDATCYIGNIDDRATDAIVWELMIQAGPLVNLHLPKDRITQSHQGYAFAEFQTEQDADY 69
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A K+ +G+ LY + +R + D+
Sbjct: 70 ACKVMNGL-KLYGKPIRVNKASNDR 93
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
S +++QI + G N+++G+LD V+ER+LY+ G ++ L + RD +PKG
Sbjct: 89 ASNDRKQI-----DIGANLFVGSLDPAVDERLLYETFSAFGGIIGLPKVARDPAGGEPKG 143
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSRKSRSD 132
F FV ++S E AI+ +G L N T+ +A+ KN + L + ++R +
Sbjct: 144 FGFVSFDSFEAADAAIEALNGQFLLNNNITVDYAIKKDSKNGERHGTAAERLLAAQARKN 203
>gi|157137418|ref|XP_001663981.1| spliceosome associated protein [Aedes aegypti]
gi|108869713|gb|EAT33938.1| AAEL013795-PA [Aedes aegypti]
Length = 362
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LD+KV+E +L+++ +QAG VV++++P+D+ T +G+ FVE+ EE Y
Sbjct: 10 NQDATIYVGGLDDKVSETLLWEMFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET KGFAF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S E A+ +G L NR ++ +A K ++ S L+++
Sbjct: 147 INFASFEASDAAMDAMNG-QYLCNRPISVSYAFKKDSKGERHGSAAERLLAAQ 198
>gi|50553138|ref|XP_503979.1| YALI0E15356p [Yarrowia lipolytica]
gi|49649848|emb|CAG79572.1| YALI0E15356p [Yarrowia lipolytica CLIB122]
Length = 225
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFV 77
N+ + N +YIGNLDE V E +LY++++QAG +V + +P+D+ + +G+ FV
Sbjct: 2 NRVNQQEADQNPEATLYIGNLDENVTEAILYELMLQAGPIVHINLPKDRVSQTHQGYGFV 61
Query: 78 EYESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDKN 113
EY++E +YA + + I L+ +++R + S DK
Sbjct: 62 EYKTEADANYAASIMNQI-WLFGKSIRVSKSASDKQ 96
>gi|170057743|ref|XP_001864617.1| splicing factor 3B subunit 4 [Culex quinquefasciatus]
gi|167877079|gb|EDS40462.1| splicing factor 3B subunit 4 [Culex quinquefasciatus]
Length = 360
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LD+KV+E +L+++ +QAG VV++++P+D+ T +G+ FVE+ EE Y
Sbjct: 10 NQDATIYVGGLDDKVSETLLWEMFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET KGFAF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S E A+ +G L NR ++ +A K ++ S L+++
Sbjct: 147 INFASFEASDAAMDAMNG-QYLCNRPISVSYAFKKDSKGERHGSAAERLLAAQ 198
>gi|198425590|ref|XP_002119350.1| PREDICTED: similar to splicing factor 3b, subunit 4 [Ciona
intestinalis]
Length = 375
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV E +L+++ +QAG VV ++P+D+ + +G+ FVE+ +EE Y
Sbjct: 10 NQDATVYVGGLDEKVAEPLLWELFLQAGVVVSTHMPKDRISGSHQGYGFVEFLAEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKILN-MIKLYGKPIR 85
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 87 NKASSHQKNLDVGANLFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSG 94
+ + S E A++ +G
Sbjct: 147 INFASFEASDAAMEAMNG 164
>gi|170590788|ref|XP_001900153.1| Hypothetical RNA-binding protein C08B11.5 in chromosome II,
putative [Brugia malayi]
gi|158592303|gb|EDP30903.1| Hypothetical RNA-binding protein C08B11.5 in chromosome II,
putative [Brugia malayi]
Length = 375
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LDEKV + +L+++ +QAG VV + +P+D+ T +GF F+E+ EE Y
Sbjct: 10 NQDATIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + ++
Sbjct: 70 AIKIMN-MIKLYGKPIK 85
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
+ NK N + G NV++GNLD +V+E++L+D G ++ + I RD ET KG
Sbjct: 84 IKVNKASAHEKNMDVGANVFVGNLDPEVDEKLLFDTFSAFGVILQVPKIMRDAETGXSKG 143
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
FAFV + S E AI+ +G L NR T+ +A K ++ + L+++
Sbjct: 144 FAFVNFASFEASDSAIEAMNGQF-LCNRAITVSYAFKKDTKGERHGTAAERMLAAQ 198
>gi|350406084|ref|XP_003487648.1| PREDICTED: splicing factor 3B subunit 4-like [Bombus impatiens]
Length = 413
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LD+KV E +++++ +Q+G VV++++P+D+ T +G+ FVE+ EE Y
Sbjct: 10 NQDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET KGFAF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAF 146
Query: 77 VEYESEEIGHYAIKLFSG 94
+ + S + +I+ +G
Sbjct: 147 INFASFDASDASIEAMNG 164
>gi|332028466|gb|EGI68509.1| Splicing factor 3B subunit 4 [Acromyrmex echinatior]
Length = 410
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LD+KV E +++++ +Q+G VV++++P+D+ T +G+ FVE+ EE Y
Sbjct: 10 NQDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET KGFAF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAF 146
Query: 77 VEYESEEIGHYAIKLFSG 94
+ + S + +I+ +G
Sbjct: 147 INFASFDASDASIEAMNG 164
>gi|17530817|ref|NP_511058.1| spliceosomal protein on the X [Drosophila melanogaster]
gi|7290689|gb|AAF46136.1| spliceosomal protein on the X [Drosophila melanogaster]
gi|68051249|gb|AAY84889.1| RE50839p [Drosophila melanogaster]
gi|220952204|gb|ACL88645.1| Spx-PA [synthetic construct]
Length = 347
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y G LD+KV+E +L+++ +QAG VV++++P+D+ T +G+ FVE+ SEE Y
Sbjct: 10 NQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
IK+ + ++ LY + +R
Sbjct: 70 GIKIMN-MIKLYGKPIR 85
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET K K FAF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAF 146
Query: 77 VEYESEEIGHYAIKLFSG 94
+ + S E A+ +G
Sbjct: 147 INFASFEASDAAMDAMNG 164
>gi|402593376|gb|EJW87303.1| hypothetical protein WUBG_01785 [Wuchereria bancrofti]
Length = 375
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LDEKV + +L+++ +QAG VV + +P+D+ T +GF F+E+ EE Y
Sbjct: 10 NQDATIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + ++
Sbjct: 70 AIKIMN-MIKLYGKPIK 85
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
+ NK N + G NV++GNLD +V+E++L+D G ++ + I RD ET KG
Sbjct: 84 IKVNKASAHEKNMDVGANVFVGNLDPEVDEKLLFDTFSAFGVILQVPKIMRDAETGNSKG 143
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
FAFV + S E AI+ +G L NR T+ +A K ++ + L+++
Sbjct: 144 FAFVNFASFEASDSAIEAMNGQF-LCNRAITVSYAFKKDTKGERHGTAAERMLAAQ 198
>gi|449281849|gb|EMC88820.1| Splicing factor 3B subunit 4, partial [Columba livia]
Length = 177
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE YAIK
Sbjct: 2 ATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIK 61
Query: 91 LFSGIVTLYNRTLR 104
+ + ++ LY + +R
Sbjct: 62 IMN-MIKLYGKPIR 74
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 76 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 135
Query: 77 VEYESEEIGHYAIKLFSG 94
+ + S + AI+ +G
Sbjct: 136 INFASFDASDAAIEAMNG 153
>gi|307167809|gb|EFN61250.1| Splicing factor 3B subunit 4 [Camponotus floridanus]
Length = 409
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LD+KV E +++++ +Q+G VV++++P+D+ T +G+ FVE+ EE Y
Sbjct: 10 NQDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET KGFAF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAF 146
Query: 77 VEYESEEIGHYAIKLFSG 94
+ + S + +I+ +G
Sbjct: 147 INFASFDASDASIEAMNG 164
>gi|343425574|emb|CBQ69109.1| related to spliceosome-associated protein SAP-49 [Sporisorium
reilianum SRZ2]
Length = 272
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N YIGN+D++ + ++++++IQAG +V+L++P+D+ T +G+AF E+++E+ Y
Sbjct: 10 NQDATCYIGNIDDRATDAIVWELMIQAGPLVNLHLPKDRITQTHQGYAFAEFQTEQDADY 69
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A K+ +G+ LY + +R + D+
Sbjct: 70 ACKVMNGL-KLYGKPIRVNKASNDR 93
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 7/120 (5%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
S +++QI + G N+++G+LD V+ER+LY+ G ++ L + RD + +PKG
Sbjct: 89 ASNDRKQI-----DIGANLFVGSLDAAVDERLLYETFSAFGGILGLPKVARDPASGEPKG 143
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTL-YNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSD 132
FAFV ++S E AI+ +G L N T+ +A+ KN + L + ++R +
Sbjct: 144 FAFVSFDSFEAADAAIEALNGQFLLNKNITVDYAIKKDSKNGERHGTAAERLLAAQARKN 203
>gi|383857497|ref|XP_003704241.1| PREDICTED: splicing factor 3B subunit 4-like [Megachile rotundata]
Length = 413
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LD+KV E +++++ +Q+G VV++++P+D+ T +G+ FVE+ EE Y
Sbjct: 10 NQDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET KGFAF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAF 146
Query: 77 VEYESEEIGHYAIKLFSG 94
+ + S + +I+ +G
Sbjct: 147 INFASFDASDASIEAMNG 164
>gi|48097884|ref|XP_393914.1| PREDICTED: splicing factor 3B subunit 4 [Apis mellifera]
Length = 413
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LD+KV E +++++ +Q+G VV++++P+D+ T +G+ FVE+ EE Y
Sbjct: 10 NQDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET KGFAF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAF 146
Query: 77 VEYESEEIGHYAIKLFSG 94
+ + S + +I+ +G
Sbjct: 147 INFASFDASDASIEAMNG 164
>gi|422292932|gb|EKU20233.1| splicing factor 3B subunit 4, partial [Nannochloropsis gaditana
CCMP526]
Length = 301
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY G LDEKV E +L++++ G VV +++PRDK T + F FVE+ SEE Y
Sbjct: 10 NQDATVYCGGLDEKVTEDLLWELMQNVGPVVHVHMPRDKVTGMHQCFGFVEFRSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A+K+ + +V +Y + LR + QD+
Sbjct: 70 AVKIMN-MVRMYGKPLRVNKASQDR 93
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 15/140 (10%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNL +V+E+ LYD G + + D +T KGF FV ++S E YA
Sbjct: 99 GANLFIGNLAAEVDEKDLYDTFSAFGGITQPPKVMFDPDTGHTKGFGFVSFDSFEAADYA 158
Query: 89 IKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISHH 146
I+ +G L R +++A K ++ S L++ ++ + H
Sbjct: 159 IECMNG-AYLGGRPICVQYAYKKDSKGERHGSQAERLLAASNQQA---------VRFKAH 208
Query: 147 SMRISVPRHYSS--EEPPPP 164
++ + P + PPPP
Sbjct: 209 TLFATGPGQIGTGMGAPPPP 228
>gi|380011609|ref|XP_003689892.1| PREDICTED: splicing factor 3B subunit 4-like [Apis florea]
Length = 413
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LD+KV E +++++ +Q+G VV++++P+D+ T +G+ FVE+ EE Y
Sbjct: 10 NQDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET KGFAF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAF 146
Query: 77 VEYESEEIGHYAIKLFSG 94
+ + S + +I+ +G
Sbjct: 147 INFASFDASDASIEAMNG 164
>gi|347966116|ref|XP_321584.5| AGAP001538-PA [Anopheles gambiae str. PEST]
gi|333470203|gb|EAA00839.5| AGAP001538-PA [Anopheles gambiae str. PEST]
Length = 408
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LD+KV E +L+++ +Q+G VV++++P+D+ T +G+ FVE+ EE Y
Sbjct: 10 NQDATIYVGGLDDKVTETLLWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFLGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + + G N++IGNLD +V+E++LYD G ++ I RD ET KGFAF
Sbjct: 87 NKASAHQKSLDVGANIFIGNLDLEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPV 134
+ + S E A+ +G L NR ++ +A K ++ S L+++ S
Sbjct: 147 INFASFEASDAAMDAMNG-QYLCNRPISVSYAFKKDSKGERHGSAAERLLAAQNPLS--- 202
Query: 135 PMPVNGMEISHHSMRISVPRHYSSEEPPPP 164
H+ R P ++ P PP
Sbjct: 203 -----------HADR---PHQLFADAPAPP 218
>gi|195340414|ref|XP_002036808.1| GM12470 [Drosophila sechellia]
gi|194130924|gb|EDW52967.1| GM12470 [Drosophila sechellia]
Length = 299
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y G LD+KV+E +L+++ +QAG VV++++P+D+ T +G+ FVE+ SEE Y
Sbjct: 10 NQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
IK+ + ++ LY + +R
Sbjct: 70 GIKIMN-MIKLYGKPIR 85
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET K K FAF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S E A+ +G L NR ++ +A K ++ S L+++
Sbjct: 147 INFASFEASDAAMDAMNG-QYLCNRPISVSYAFKKDHKGERHGSAAERLLAAQ 198
>gi|339244657|ref|XP_003378254.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316972855|gb|EFV56501.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 432
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LDE+V+E +L+++ +QAG +V +++P+D+ + +G+ FVE+ EE Y
Sbjct: 10 NQDATIYVGGLDERVSETILWELFVQAGPIVSVHMPKDRISSTHQGYGFVEFMGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G NV+IGNLD +V+E++LYD G ++ + I RD ET KGFAF
Sbjct: 87 NKASAHQKNLDIGANVFIGNLDPEVDEKLLYDTFSAFGVLLQVPKIMRDPETGNSKGFAF 146
Query: 77 VEYESEEIGHYAIKLFSG 94
+ + S E AI+ +G
Sbjct: 147 INFASFEASDAAIEAMNG 164
>gi|312067511|ref|XP_003136777.1| spliceosomal protein on the X [Loa loa]
gi|307768054|gb|EFO27288.1| spliceosomal protein on the X [Loa loa]
Length = 375
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LDEKV + +L+++ +QAG VV + +P+D+ T +GF F+E+ EE Y
Sbjct: 10 NQDATIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + ++
Sbjct: 70 AIKIMN-MIKLYGKPIK 85
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
+ NK N + G NV++GNLD +V+E++L+D G ++ + I RD ET KG
Sbjct: 84 IKVNKASAHEKNMDVGANVFVGNLDPEVDEKLLFDTFSAFGVILQVPKIMRDAETGNSKG 143
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
FAFV + S E AI+ +G L NR T+ +A K ++ + L+++
Sbjct: 144 FAFVNFASFEASDSAIEAMNGQF-LCNRAITVSYAFKKDTKGERHGTAAERMLAAQ 198
>gi|449016079|dbj|BAM79481.1| similar to cleavage stimulation factor subunit 2 [Cyanidioschyzon
merolae strain 10D]
Length = 300
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
S C V+IGN+ V E +L + L Q G VV L I DKET KPKG+ F EY E
Sbjct: 2 SRGSCTVFIGNIPYGVTEDMLLERLQQVGPVVSLRILYDKETGKPKGYGFCEYRDPETAE 61
Query: 87 YAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTP 123
A++ + + R LR A S Q +N ++ +T P
Sbjct: 62 SAVRNLNERIEFGGRMLRIAPSSQTRNQASAGGSTAP 98
>gi|63054583|ref|NP_594001.2| U2 snRNP-associated RNA-binding protein Sap49 [Schizosaccharomyces
pombe 972h-]
gi|26399889|sp|O14102.2|SAP49_SCHPO RecName: Full=Spliceosome-associated protein 49
gi|159883972|emb|CAC19730.2| U2 snRNP-associated RNA-binding protein Sap49 [Schizosaccharomyces
pombe]
Length = 335
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+GNLDEKV + +L+++ +QAG VV+++IPRD+ + GF F E+ E+ Y
Sbjct: 8 NQDATIYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEY 67
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A ++ + V L+ + +R + QD+
Sbjct: 68 ACQILNQ-VKLFGKPIRVNRASQDR 91
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 84
N+ G N+++GNLD V+ERVLYD G++V + RD E + KG+ FV Y+S E
Sbjct: 94 NTLIGANLFVGNLDPLVDERVLYDTFSALGQLVKAPQVARD-ENGRSKGYGFVSYDSFET 152
Query: 85 GHYAIK 90
AI+
Sbjct: 153 ADAAIE 158
>gi|443717173|gb|ELU08367.1| hypothetical protein CAPTEDRAFT_163289 [Capitella teleta]
Length = 412
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LD+KV+E +L+++ +QAG VV++++P+D+ + +G+ FVE+ EE Y
Sbjct: 10 NQDATIYVGGLDDKVSESILWELFLQAGPVVNVHMPKDRISQAHQGYGFVEFMGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AI++ + ++ LY + +R
Sbjct: 70 AIRIMN-MIKLYGKPIR 85
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD +T KGFAF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGFAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNRTL 103
+ + S E AI+ +G L NR +
Sbjct: 147 INFASFETSDSAIEAMNG-QYLCNRAI 172
>gi|164659882|ref|XP_001731065.1| hypothetical protein MGL_2064 [Malassezia globosa CBS 7966]
gi|159104963|gb|EDP43851.1| hypothetical protein MGL_2064 [Malassezia globosa CBS 7966]
Length = 227
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N Y+GNLDE+V + +++++++Q G V +Y+P+D+ + +G+AF EY +E Y
Sbjct: 8 NQEATCYVGNLDERVTDEIIWELMLQVGPVAHIYLPKDRISQMHQGYAFAEYCTESDAEY 67
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A ++ +GI LY + +R +S +K
Sbjct: 68 ACRIMNGI-KLYGKPIRVNMSSNEK 91
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
+S N++Q++ + G N+++GNLD V+ER+LYD G ++ I RD T++ K
Sbjct: 86 MSSNEKQVV----DIGANLFVGNLDSGVDERLLYDTFATFGGILGAPRIARDPTTNESKN 141
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSR- 130
+ FV ++S E AI+ + L NR T+ +AL KN + L + ++R
Sbjct: 142 YGFVSFDSFESADGAIESLNNQF-LLNRPMTVMYALRKDAKNGERHGTQAERLVAAQARK 200
Query: 131 -------SDPVPMPV 138
DP MP
Sbjct: 201 NHVLPTAQDPYGMPA 215
>gi|328767802|gb|EGF77850.1| hypothetical protein BATDEDRAFT_33617 [Batrachochytrium
dendrobatidis JAM81]
Length = 308
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +VY+GN++++ + +++++ +QAG VV++Y+P+D+ T +G+ FVE+ +E+ Y
Sbjct: 8 NKEASVYVGNIEDRATDSLIWELFLQAGPVVNVYLPKDRVTQMHQGYGFVEFMTEQDAEY 67
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMT 120
A K+ + +V LY + LR + DK A + T
Sbjct: 68 ASKVMN-MVRLYGKPLRVNKATSDKMALDVGAT 99
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 23/166 (13%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G ++I NLD V+E+ LYD G + I R+ ET + KG+ FV + + E A
Sbjct: 97 GATLFISNLDMTVDEKALYDTFSAFGMIASTPKISRNPETGESKGYGFVSFSTFEASDAA 156
Query: 89 IKLFSGIVTLYNRTLR--FALSGQDKNAQNSSMT----------TTPLSSRKSRSDPVPM 136
I+ +G L NR + +AL K ++ S TT L ++ +D +
Sbjct: 157 IEAMNGQF-LANRAIAVSYALKKDGKGERHGSAAERLLAAQSGKTTALVPNQNFADIPSV 215
Query: 137 PVNGMEISHH-SMRISVPRHYSSEEPPP--------PGVTLETNGY 173
P G S + P H + PPP PG +GY
Sbjct: 216 PSAGARYSDMPAAGFGYPTHGTKSGPPPGFNPTPGYPGFNPSPSGY 261
>gi|449489183|ref|XP_004176732.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 7 [Taeniopygia
guttata]
Length = 272
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNLD KV E +++++ QAG V+ + IP+D++ +PK FAFV ++ EE Y ++L
Sbjct: 12 LFVGNLDPKVTEELIFELFHQAGPVITVKIPKDRDG-RPKQFAFVNFKHEESVPYGLRLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVN 139
+GI LY R +R SG AQ+ + + + L S + +P P +
Sbjct: 71 NGI-XLYGRPMRIQFRSGSSHAAQDINPSCSQLGSAGTSPPGMPHPAS 117
>gi|422295420|gb|EKU22719.1| splicing factor 3B subunit 4 [Nannochloropsis gaditana CCMP526]
Length = 274
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY G LDEKV E +L++++ G VV +++PRDK T + F FVE+ SEE Y
Sbjct: 10 NQDATVYCGGLDEKVTEDLLWELMQNVGPVVHVHMPRDKVTGMHQCFGFVEFRSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A+K+ + +V +Y + LR + QD+
Sbjct: 70 AVKIMN-MVRMYGKPLRVNKASQDR 93
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 15/140 (10%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNL +V+E+ LYD G + + D +T KGF FV ++S E YA
Sbjct: 99 GANLFIGNLAAEVDEKDLYDTFSAFGGITQPPKVMFDPDTGHTKGFGFVSFDSFEAADYA 158
Query: 89 IKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISHH 146
I+ +G L R +++A K ++ S L++ ++ + H
Sbjct: 159 IECMNG-AYLGGRPICVQYAYKKDSKGERHGSQAERLLAASNQQA---------VRFKAH 208
Query: 147 SMRISVPRHYSS--EEPPPP 164
++ + P + PPPP
Sbjct: 209 TLFATGPGQIGTGMGAPPPP 228
>gi|357614441|gb|EHJ69078.1| spliceosomal protein on the X [Danaus plexippus]
Length = 334
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LD++V E +L+++ +QAG VV++++P+D+ T +G+ FVE+ EE Y
Sbjct: 10 NQDATIYVGGLDDRVTESLLWELFVQAGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKVMN-MIKLYGKPVR 85
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
V NK N + G NV+IGNLD +V+E++LYD G ++ + RD ET K
Sbjct: 84 VRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKA 143
Query: 74 FAFVEYESEEIGHYAIK 90
FAF+ + S E AI+
Sbjct: 144 FAFINFASFEASDAAIE 160
>gi|324512478|gb|ADY45169.1| Splicing factor 3B subunit 4 [Ascaris suum]
Length = 399
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LDEKV + +L+++ +Q+G VV + +P+D+ T+ +GF FVE+ EE Y
Sbjct: 10 NQDATIYVGGLDEKVTDAILWELFVQSGPVVSVNMPKDRVTNSHQGFGFVEFMGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + ++
Sbjct: 70 AIKIMN-MIKLYGKPIK 85
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
+ NK N + G N+++GNLD +V+E++L+D G ++ + I RD ET KG
Sbjct: 84 IKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLFDTFSAFGVILQVPKIMRDAETGNSKG 143
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
FAFV + S E AI+ SG L NR T+ +A K ++ + L+++
Sbjct: 144 FAFVNFASFEASDSAIEAMSGQF-LCNRAITVSYAFKKDAKGERHGTAAERMLAAQ 198
>gi|56755563|gb|AAW25960.1| SJCHGC01449 protein [Schistosoma japonicum]
Length = 152
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LDEKVNE +L+++ +QAG VV++++P+D+ + +G+ FVE+ +EE Y
Sbjct: 10 NQDATIYVGGLDEKVNESILWELFLQAGPVVNVHMPKDRINMQHQGYGFVEFMTEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
A+++ + ++ LY + +R
Sbjct: 70 AMRIMN-MIKLYGKPIR 85
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET KG+AF
Sbjct: 87 NKASANQKNLDIGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGYAF 146
Query: 77 VEY 79
+ +
Sbjct: 147 INF 149
>gi|453083918|gb|EMF11963.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 387
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+YIGNLDE+ + +++++++QAG V+++++P+D+ T +G+ FVE+ SE+ YA K+
Sbjct: 15 LYIGNLDERCTDPLIWELMLQAGPVINVHLPKDRVTQSHQGYGFVEFGSEDDADYACKIM 74
Query: 93 SGIVTLYNRTLRFALSGQDKNAQN 116
+ I LY + +R + D+ N
Sbjct: 75 NQI-RLYGKPIRVNKASADRRGPN 97
Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 34 YIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++GNLD V+E+VLY+ + G +V + RD E++ KG+ FV Y + E AI+
Sbjct: 114 FVGNLDNMVDEKVLYETFSRFGPLVAAPKVARD-ESNLSKGYGFVSYAAFEASDQAIEHM 172
Query: 93 SG 94
G
Sbjct: 173 HG 174
>gi|358337762|dbj|GAA56093.1| splicing factor 3B subunit 4 [Clonorchis sinensis]
Length = 363
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LDEK E +L+++ +QAG VV++++P+D+ T + +G+ FVE+ +EE Y
Sbjct: 10 NQDATIYVGGLDEKTTESILWELFLQAGPVVNVHMPKDRITMQHQGYGFVEFMTEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
A+++ + ++ L+ + +R
Sbjct: 70 AMRIMN-MIKLFGKPIR 85
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET KG+AF
Sbjct: 87 NKASANQKNLDIGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S E AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 147 INFASFEASDAAIEAMNG-QYLCNRAITISYAFKKDSKGERHGSAAERLLAAQSPLS 202
>gi|452982549|gb|EME82308.1| hypothetical protein MYCFIDRAFT_211591 [Pseudocercospora fijiensis
CIRAD86]
Length = 391
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+YIGNLDE+ ++ +++++++QAG V+++++P+D+ T +G+ FVE+ SE+ YA+K+
Sbjct: 15 LYIGNLDERCSDALVWELMLQAGPVINVHLPKDRVTQSHQGYGFVEFGSEDDADYAVKIM 74
Query: 93 SGIVTLYNRTLRFALSGQDK 112
+ I L+ + +R + DK
Sbjct: 75 NQI-RLWGKPIRVNKASADK 93
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYAI 89
+++GNLD V+E+VLYD + G ++ + RD + + KG+ F+ Y + E AI
Sbjct: 110 AELFVGNLDSMVDEKVLYDTFSRFGPLLATPKVARD-DANLSKGYGFISYSTFESSDEAI 168
Query: 90 KLFSG 94
+ G
Sbjct: 169 EHMHG 173
>gi|156387980|ref|XP_001634480.1| predicted protein [Nematostella vectensis]
gi|156221563|gb|EDO42417.1| predicted protein [Nematostella vectensis]
Length = 380
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LDEKV+E +++++ +Q+G VV++++P+D+ T +G+ FVE+ EE Y
Sbjct: 10 NQDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ +Y + +R
Sbjct: 70 AIKVMN-MIKVYGKPIR 85
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 14/152 (9%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +V+E++LYD G ++ I RD +T KGFAF
Sbjct: 87 NKASAHNKNLDVGANLFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPV 134
+ + S + AI+ +G L NR T+ +A + K ++ S L+++
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKESKGERHGSAAERLLAAQN------ 199
Query: 135 PMPVNGMEISHHSMRISVPRHYSSEEPP--PP 164
P+ + H + P S+ PP PP
Sbjct: 200 --PLAQADRPHQLFADAPPIQTSTSLPPMIPP 229
>gi|313240198|emb|CBY32547.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV E +L ++ IQ G VV+ ++P+D+ T +G+ FVE+ SE+ Y
Sbjct: 8 NQDATVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSEDDADY 67
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ L+ + +R
Sbjct: 68 AIKILN-MIKLFGKPVR 83
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
V NK N + G N++IGNLD +++E++LYD G ++ I RD +T KG
Sbjct: 82 VRVNKASSHQKNLDVGANLFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 141
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
FAF+ Y S E A++ +G L NR T+ FA K ++ S L+++
Sbjct: 142 FAFINYSSFEAADAALEAMNG-QYLCNRPITISFAFKKDGKGERHGSAAERLLAAQ 196
>gi|313237737|emb|CBY12875.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV E +L ++ IQ G VV+ ++P+D+ T +G+ FVE+ SE+ Y
Sbjct: 8 NQDATVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSEDDADY 67
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ L+ + +R
Sbjct: 68 AIKILN-MIKLFGKPVR 83
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
V NK N + G N++IGNLD +++E++LYD G ++ I RD +T KG
Sbjct: 82 VRVNKASSHQKNLDVGANLFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 141
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
FAF+ Y S E A++ +G L NR T+ FA K ++ S L+++
Sbjct: 142 FAFINYSSFEAADAALEAMNG-QYLCNRPITISFAFKKDGKGERHGSAAERLLAAQ 196
>gi|357612263|gb|EHJ67888.1| spliceosomal protein on the X [Danaus plexippus]
Length = 259
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LD++V E +L+++ +QAG VV++++P+D+ T +G+ FVE+ EE Y
Sbjct: 10 NQDATIYVGGLDDRVTESLLWELFVQAGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKVMN-MIKLYGKPVR 85
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
V NK N + G NV+IGNLD +V+E++LYD G ++ + RD ET K
Sbjct: 84 VRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKA 143
Query: 74 FAFVEYESEEIGHYAIK 90
FAF+ + S E AI+
Sbjct: 144 FAFINFASFEASDAAIE 160
>gi|312375219|gb|EFR22634.1| hypothetical protein AND_14423 [Anopheles darlingi]
Length = 413
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LD+K E +L+++ +Q+G VV++++P+D+ T +G+ FVE+ EE Y
Sbjct: 10 NQDATIYVGGLDDKATETLLWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFLGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + + G N++IGNLD +V+E++LYD G ++ I RD ET KGFAF
Sbjct: 87 NKASAHQKSLDVGANIFIGNLDLEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S E A+ +G L NR ++ +A K ++ S L+++ S
Sbjct: 147 INFASFEASDAAMDAMNG-QYLCNRPISVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|393220802|gb|EJD06288.1| hypothetical protein FOMMEDRAFT_18426 [Fomitiporia mediterranea
MF3/22]
Length = 358
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+GNLDE+V++ +++++++QAG VV++++P+D+ + +G+ F E+ +EE Y
Sbjct: 8 NQEATVYLGNLDERVSDAIIWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDAEY 67
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A K+ + I L+ + +R + DK
Sbjct: 68 ACKIMNQI-KLWGKPIRVNKASSDK 91
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 9/124 (7%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLY-IPRDKETDKPKG 73
S +K+Q+ + G N+++GNLDE ++ER+LYD G + + RD T K KG
Sbjct: 87 ASSDKKQL-----DVGANLFVGNLDENLDERLLYDTFSAFGMLATTAKVARDPTTGKSKG 141
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNRTL--RFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ FV Y E AI+ + L N+ + ++A K ++ + L+++ ++
Sbjct: 142 YGFVSYIDFESADAAIEAMNNQF-LMNKAISVQYAFKKDGKGERHGTPAERLLAAQARKN 200
Query: 132 DPVP 135
+ +P
Sbjct: 201 NALP 204
>gi|91079430|ref|XP_968120.1| PREDICTED: similar to spliceosome associated protein [Tribolium
castaneum]
gi|270004395|gb|EFA00843.1| hypothetical protein TcasGA2_TC003731 [Tribolium castaneum]
Length = 393
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LD+KV E +L+++ +Q+G +V++++P+D+ T +G+ FVE+ EE Y
Sbjct: 10 NRDATIYVGGLDDKVTESLLWELFVQSGPLVNVHMPKDRVTMMHQGYGFVEFMGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD +T KGFAF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGFAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPV 134
+ + S E +I+ +G L NR ++ +A K ++ S L+++ +P+
Sbjct: 147 INFASFEASDASIEAMNG-QYLCNRPISVSYAFKKDSKGERHGSAAERLLAAQ----NPL 201
Query: 135 PMPVNGMEISHHSMRISVPRHYSSEEPPPPGVTL 168
++ + + + + PPPP V L
Sbjct: 202 SQADRPHQLFADAPPMGMMPPGMTLAPPPPPVIL 235
>gi|443918492|gb|ELU38942.1| splicing factor 3b subunit 4 [Rhizoctonia solani AG-1 IA]
Length = 325
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 60/94 (63%), Gaps = 5/94 (5%)
Query: 23 MSG----NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVE 78
MSG + N+ VY+GNLDE+ + +++++++QAG VV++++P+D+ + +GF F E
Sbjct: 1 MSGRPQEDRNAEATVYLGNLDERCTDALIWELMLQAGPVVNVHLPKDRISQAHQGFGFCE 60
Query: 79 YESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDK 112
+ +EE YA K+ + I L+ + +R S DK
Sbjct: 61 FLTEEDAEYACKIMNQI-KLWGKPIRVNKSSSDK 93
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 16 SRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRV-VDLYIPRDKETDKPKGF 74
S +K+Q+ + G N++IG LD V+ER+LYD G + + RD + + KG+
Sbjct: 90 SSDKKQL-----DVGANLFIGGLDLNVDERLLYDTFSAFGVMSTTAKVARDPASGESKGY 144
Query: 75 AFVEYESEEIGHYAIKLFSGIVTLYNRTLR 104
FV Y E AI+ +G L N+ ++
Sbjct: 145 GFVSYTDFESADAAIEAMNGQF-LMNKAIQ 173
>gi|242011768|ref|XP_002426618.1| spliceosome associated protein, putative [Pediculus humanus
corporis]
gi|212510771|gb|EEB13880.1| spliceosome associated protein, putative [Pediculus humanus
corporis]
Length = 691
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LD+KV E +++++ +Q+G VV++++P+D+ T +G+ FVE+ EE Y
Sbjct: 10 NQDATIYVGGLDDKVTEPLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++L+D G ++ I RD ++ KGFAF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDPEVDEKLLFDTFSAFGVILQTPKIMRDPDSGNSKGFAF 146
Query: 77 VEYESEEIGHYAIKLFSG 94
+ + S + +I+ +G
Sbjct: 147 INFASFDASDASIEAMNG 164
>gi|406865924|gb|EKD18965.1| splicing factor 3b subunit 4 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 650
Score = 69.7 bits (169), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
VYIGN+DE+V + +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE YA ++
Sbjct: 15 VYIGNIDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYAARIM 74
Query: 93 SGIVTLYNRTLRFALSGQDK 112
+ V LY + +R + DK
Sbjct: 75 NQ-VRLYGKPIRVNKASADK 93
Score = 39.7 bits (91), Expect = 0.85, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRV-VDLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G ++IGNLD V+E+ LYD + G + I RD E+ KG+ FV Y + E A
Sbjct: 100 GAELFIGNLDPMVDEKTLYDTFSRFGSLQAPPKIARD-ESGLSKGYGFVSYATFEASDDA 158
Query: 89 IKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVP 135
I +G L N+ ++++A K ++ L+S +++ VP
Sbjct: 159 IANMNG-QYLMNKDVSVQYAYKKDGKGERHGDEAERMLASSGQKNNVVP 206
>gi|254584372|ref|XP_002497754.1| ZYRO0F12716p [Zygosaccharomyces rouxii]
gi|238940647|emb|CAR28821.1| ZYRO0F12716p [Zygosaccharomyces rouxii]
Length = 210
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 53/83 (63%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
MS NSN ++Y+GN+D KV + LY++ +Q + + P+DK +G+AFVE+ S
Sbjct: 1 MSSNSNRDTSIYVGNIDPKVTKAQLYELFVQISPIRRIRYPKDKVLQIHQGYAFVEFYSV 60
Query: 83 EIGHYAIKLFSGIVTLYNRTLRF 105
E Y +++ + +V+LY+RTLR
Sbjct: 61 EDVQYVLRVMNNVVSLYDRTLRI 83
>gi|403172110|ref|XP_003331254.2| hypothetical protein PGTG_13217 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169716|gb|EFP86835.2| hypothetical protein PGTG_13217 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 392
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 25 GNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEI 84
G+ N VY+GNLDE+ + +++++++QAG VV++++P+D+ + +G+ F E+ +E+
Sbjct: 7 GDRNQEATVYMGNLDERCTDALVWELMLQAGPVVNVHLPKDRVSMSHQGYGFCEFLTEDD 66
Query: 85 GHYAIKLFSGIVTLYNRTLRFALSGQDK 112
YA K+ + I LY + +R + D+
Sbjct: 67 AEYACKIMNQI-KLYGKPIRVNKASSDR 93
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLY-IPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD V+ER+LYD G +V I R+ T + G+ FV YES E A
Sbjct: 99 GANLFIGNLDANVDERMLYDTFSTFGTLVQTAKIARNPTTGQSNGYGFVAYESFEAADTA 158
Query: 89 IKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVP 135
I+ +G L N+ T+++A K ++ + L+++ +++ +P
Sbjct: 159 IESMNGQF-LMNKAITVQYAFKKDGKGERHGTPAERLLAAQARKNNALP 206
>gi|255715615|ref|XP_002554089.1| KLTH0E14036p [Lachancea thermotolerans]
gi|238935471|emb|CAR23652.1| KLTH0E14036p [Lachancea thermotolerans CBS 6340]
Length = 209
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 23 MSGNSNSGCN-VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYES 81
M G+S N VY+GN+D KV++ +LY++ +Q G V + P+DK +GFAFVE+ S
Sbjct: 1 MDGSSTVPANTVYVGNVDPKVSKELLYELFLQIGPVAKIRYPKDKVLQTHQGFAFVEFNS 60
Query: 82 EEIGHYAIKLFSGIVTLYNRTLR 104
+ YA K + V LY+RTL+
Sbjct: 61 PQDAEYASKCLNNTVRLYDRTLK 83
>gi|403216887|emb|CCK71383.1| hypothetical protein KNAG_0G03260 [Kazachstania naganishii CBS
8797]
Length = 201
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
NS N+Y+GN+D +V LY++ +QA VV L PRDK P+G+AFV S + Y
Sbjct: 3 NSTTNLYVGNIDPRVTREQLYELFVQACPVVSLRYPRDKVLQTPQGYAFVGVPSVQDADY 62
Query: 88 AIKLFSGIVTLYNRTLRF 105
A++L VTL+ R L+
Sbjct: 63 AVQLLHNCVTLHGRPLKI 80
>gi|346974668|gb|EGY18120.1| splicing factor 3B subunit 4 [Verticillium dahliae VdLs.17]
Length = 498
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGN+DE+ ++Y+I++Q G + ++++PRD+ T +GF FVE+ + YA
Sbjct: 13 ATVYIGNIDERATSTMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPGDAEYAAN 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKNAQ 115
+ +G V LY ++LR + DK Q
Sbjct: 73 VMNG-VKLYGKSLRVNKASADKQKQ 96
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G +++GNLD V+E++LYD + G ++ L +++ KGF F+ + E A+
Sbjct: 100 GAELFVGNLDPMVDEKILYDTFSRFGPLLTLPKVAREDSGNSKGFGFISFADFESSDAAV 159
Query: 90 KLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVP 135
+ G L ++++A K ++ L+++ + + VP
Sbjct: 160 ENLHGQYLLSKEVSVQYAFKKDGKGERHGDAAERELAAQAKKRNIVP 206
>gi|391337396|ref|XP_003743055.1| PREDICTED: uncharacterized protein LOC100908642 [Metaseiulus
occidentalis]
Length = 543
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LDEKV++ +L+++ +QAG +V +++P+D+ T +G+ FVE+ EE Y
Sbjct: 10 NQDATIYVGGLDEKVSDNLLWELFVQAGPIVSVHMPKDRITGLHQGYGFVEFLGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKVMN-MIKLYGKPVR 85
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
V NK N + G N++IGNLD +V+E++LYD G ++ I RD ET KG
Sbjct: 84 VRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKG 143
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
FAFV + S E AI +G L NR ++ +A K ++ S L+++
Sbjct: 144 FAFVNFASFEASDAAIDAMNG-QYLCNRAISISYAFKKDSKGERHGSAAERLLAAQ 198
>gi|112983328|ref|NP_001037646.1| spliceosomal protein on the X [Bombyx mori]
gi|109706833|gb|ABG43003.1| spliceosomal protein on the X [Bombyx mori]
Length = 342
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LD++V E +L+++ +Q+G VV++++P+D+ T +G+ FVE+ EE Y
Sbjct: 10 NQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKVMN-MIKLYGKPVR 85
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
V NK N + G NV+IGNLD +V+E++LYD G ++ + RD ET K
Sbjct: 84 VRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKA 143
Query: 74 FAFVEYESEEIGHYAIK 90
FAF+ + S E AI+
Sbjct: 144 FAFINFASFEASDAAIE 160
>gi|432105727|gb|ELK31918.1| RNA-binding protein 7 [Myotis davidii]
Length = 255
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 25 GNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEI 84
G + + C +++GNL+ KV E +L+++ Q G V+ + IP+DK+ KPK FAFV ++ E
Sbjct: 2 GAAEADCTLFVGNLETKVTEELLFELFHQGGPVIKVKIPKDKDG-KPKQFAFVNFKHEVS 60
Query: 85 GHYAIKLFSGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
YA+ L +GI L+ R ++ SG +Q+ S++
Sbjct: 61 VPYAMNLLNGI-KLFGRPIKIQFRSGSSHASQDVSLS 96
>gi|156367274|ref|XP_001627343.1| predicted protein [Nematostella vectensis]
gi|156214250|gb|EDO35243.1| predicted protein [Nematostella vectensis]
Length = 83
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
C+V++GNLD +V E +L+++ +QAG + ++ IP DK T + + F FVE+ S HYA +
Sbjct: 3 CSVFVGNLDSRVTEEILWELFLQAGPLENVRIPTDKNTGQQRSFGFVEFSSPVSVHYASE 62
Query: 91 LFSGIVTLYNRTL 103
L GI LY+R +
Sbjct: 63 LLDGI-RLYDRAI 74
>gi|353227298|emb|CCA77811.1| related to spliceosome-associated protein SAP-49 [Piriformospora
indica DSM 11827]
Length = 298
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
+ N VY+GNLDE+V + +++++++QAG VV++++P+D+ + +G+ F E+ +EE
Sbjct: 8 DRNQEATVYLGNLDERVTDAIVWELMLQAGPVVNVHLPKDRVSMSHQGYGFCEFLTEEDA 67
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDKN 113
YA K+ + I L+ + +R + DK
Sbjct: 68 EYACKIMNQI-KLWGKPIRVNKASSDKK 94
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVD-LYIPRDKETDKPKG 73
S +K+Q+ + G N++IGNLD V+ER+LYD G + I RD T + +G
Sbjct: 89 ASSDKKQL-----DIGANLFIGNLDPAVDERLLYDTFTVFGPLTQPAKIARDPTTMESRG 143
Query: 74 FAFVEYESEEIGHYAIK 90
FV Y E AI+
Sbjct: 144 HGFVSYADFESADAAIE 160
>gi|302421316|ref|XP_003008488.1| splicing factor 3B subunit 4 [Verticillium albo-atrum VaMs.102]
gi|261351634|gb|EEY14062.1| splicing factor 3B subunit 4 [Verticillium albo-atrum VaMs.102]
Length = 295
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 17 RNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAF 76
R R + + VYIGN+DE+ ++Y+I++Q G + ++++PRD+ T +GF F
Sbjct: 52 RATRLSICREQDKDATVYIGNIDERATSTMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGF 111
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQ 115
VE+ + YA + +G V LY ++LR + DK Q
Sbjct: 112 VEFRTPSDAEYAANVMNG-VKLYGKSLRVNKASADKQKQ 149
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G +++GNLD V+E++LYD + G ++ L +++ KGF F+ + E A+
Sbjct: 153 GAELFVGNLDPMVDEKILYDTFSRFGPLLTLPKVAREDSGNSKGFGFISFADFESSDAAV 212
Query: 90 KLFSG 94
+ G
Sbjct: 213 ENLHG 217
>gi|429859260|gb|ELA34048.1| splicing factor 3b subunit 4 [Colletotrichum gloeosporioides Nara
gc5]
Length = 363
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
+YIGN+DE+ + ++Y+I++Q G + ++++PRD+ T +GF FVE+ + YA
Sbjct: 13 ATIYIGNIDERASPAMVYEIMLQMGPIHNIHMPRDRVTQNHQGFGFVEFRTPGDAEYAAN 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKNAQ 115
+ +GI LY ++LR + DK Q
Sbjct: 73 VMNGI-KLYGKSLRVNKASADKQKQ 96
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G +++GNLD V+E++LYD + G +V L +++ KGF F+ Y E AI
Sbjct: 100 GAELFVGNLDPMVDEKILYDTFSRFGPLVSLPKVAREDSGNSKGFGFISYADFESSDAAI 159
Query: 90 KLFSG-IVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVP 135
G + ++++A K ++ L+++ + + VP
Sbjct: 160 ANLHGQYIASKEVSVQYAFKKDGKGERHGDAAERELAAQAKKRNIVP 206
>gi|402225695|gb|EJU05756.1| hypothetical protein DACRYDRAFT_62409 [Dacryopinax sp. DJM-731 SS1]
Length = 341
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+GNLDE+V + +++++++QAG VV++++P+D+ + +G+ F E+ +EE Y
Sbjct: 9 NQEATVYLGNLDERVTDAIIWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDAEY 68
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A K+ + I L+ + +R + DK
Sbjct: 69 ACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 9/125 (7%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVD-LYIPRDKETDKPKG 73
S +K+Q+ + G N++IGNLD V+ER+LYD G + I RD +T + KG
Sbjct: 88 ASSDKKQL-----DVGANLFIGNLDPNVDERLLYDTFSAFGILTQPAKIARDPQTSESKG 142
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ F+ Y E AI+ + L N+ T+++A K ++ + L+S+ ++
Sbjct: 143 YGFISYSDFESSDRAIESMNNQF-LMNKAITVQYAFKKDGKGERHGTDAERMLASQAKKN 201
Query: 132 DPVPM 136
+ +P+
Sbjct: 202 NALPL 206
>gi|321257040|ref|XP_003193447.1| hypothetical protein CGB_D2450C [Cryptococcus gattii WM276]
gi|317459917|gb|ADV21660.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 308
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+GNLDEK + +++++++QAG V ++++P+D+ + +GF F E+ SE Y
Sbjct: 10 NQEATVYLGNLDEKCTDALIWELMLQAGPVSNVFLPKDRISQAHQGFGFCEFMSEADAEY 69
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A+K+ + I LY + +R + DK
Sbjct: 70 AVKIMNQI-KLYGKPIRVNKASYDK 93
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
S +K+Q+ + G N+++GNLD V+E+ LYD G + D I RD T KG
Sbjct: 89 ASYDKKQV-----DVGANLFVGNLDPNVDEQTLYDTFSTFGTLADQPKIARDPTTGLSKG 143
Query: 74 FAFVEYESEEIGHYAIKLFSG-IVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSD 132
AF+ Y E AI+ +G T ++A K ++ S L+++ +
Sbjct: 144 HAFIAYNDFEAADLAIENMNGQFFGGKQITAQYAFKKDGKGERHGSQAERLLAAQAKKRQ 203
Query: 133 PVP 135
+P
Sbjct: 204 LLP 206
>gi|410078732|ref|XP_003956947.1| hypothetical protein KAFR_0D01660 [Kazachstania africana CBS 2517]
gi|372463532|emb|CCF57812.1| hypothetical protein KAFR_0D01660 [Kazachstania africana CBS 2517]
Length = 212
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
VY+GN+D +VN+ LY++ +Q GR+ + PRDK D +G+AF+E+ ++ Y +KLF
Sbjct: 9 VYVGNIDPRVNKEDLYELFVQFGRIKKINYPRDKVLDTHQGYAFIEFLNDSTVDYVLKLF 68
Query: 93 --SGIVTLYNRTLRFALS--GQDKNAQNSS 118
+ +V+LY R+L+ S G++ NA ++
Sbjct: 69 GNTNLVSLYERSLKIRKSENGKEANANGTN 98
>gi|351714226|gb|EHB17145.1| Splicing factor 3B subunit 4 [Heterocephalus glaber]
Length = 297
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LDEKV+E +L+++ +QA VV+ ++P+D+ T + +G+ FVE+ SEE Y
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQARPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
IK+ + ++ LY + +R
Sbjct: 70 DIKIMN-MIKLYGKPIR 85
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T K +AF
Sbjct: 87 NKASAHNKNLDIGANIFIGNLDPEIDEKLLYDTFSTFGVILQTPKIMRDPDTGNSKSYAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTP 123
+ + S + AI+ +G L NR T+ +A K + +TP
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKVLASDVPDSTP 194
>gi|358392239|gb|EHK41643.1| hypothetical protein TRIATDRAFT_84569 [Trichoderma atroviride IMI
206040]
Length = 387
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGN+DE+ ++Y+I++Q G + ++++PRD+ T +GF FVE+ + YA
Sbjct: 13 ATVYIGNIDERATSAMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPADAEYAAN 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ +GI LY ++LR + DK
Sbjct: 73 VMNGI-KLYGKSLRVNKASADKQ 94
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G ++IGNLD V+E+VLYD + G ++ + +++ KGF FV Y E AI
Sbjct: 100 GAELFIGNLDPMVDEKVLYDTFSRFGPLLSIPKVAREDSGASKGFGFVSYGDFESSDAAI 159
Query: 90 KLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSR-KSR 130
G L ++++A K ++ L+++ KSR
Sbjct: 160 ANLHGQYILSKEVSVQYAFKKDGKGDRHGDQAERSLAAQAKSR 202
>gi|310792398|gb|EFQ27925.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 361
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
+YIGN+DE+ + ++Y++++Q G + ++++PRD+ T +GF FVE+ + YA
Sbjct: 13 ATIYIGNIDERASPAMVYEVMLQMGPIHNIHMPRDRVTQNHQGFGFVEFRTPSDAEYAAN 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKNAQ 115
+ +GI LY ++LR + DK Q
Sbjct: 73 VMNGI-KLYGKSLRVNKASADKQKQ 96
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G +++GNLD V+E++LYD + G ++ L +++ KGF F+ Y E AI
Sbjct: 100 GAELFVGNLDPMVDEKILYDTFSRFGPLITLPKVAREDSGNSKGFGFISYADFESSDAAI 159
Query: 90 KLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVP 135
G L ++++A K ++ L+++ + + VP
Sbjct: 160 ANLHGQYILSKEVSVQYAFKKDGKGERHGDAAERELAAQAKKRNIVP 206
>gi|149578821|ref|XP_001507009.1| PREDICTED: RNA-binding protein 7-like [Ornithorhynchus anatinus]
Length = 273
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNLD KV E +L+++ QAG V+++ IP+DK+ KPK FAFV ++ EE Y + L
Sbjct: 12 LFVGNLDTKVTEELLFELFHQAGPVINVKIPKDKDG-KPKQFAFVNFKHEESVPYGMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMTTTPLSSRKSRSDPVPMP 137
+GI L+ R ++ SG +Q++ + + + P+P P
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHVSQDTGSPYSQYGNTSPSNLPMPTP 115
>gi|300176697|emb|CBK24362.2| unnamed protein product [Blastocystis hominis]
Length = 314
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LDE+V+E +L+++ +Q G VV + +P+DK +K FAF+EY+SE Y
Sbjct: 9 NEEATLYVGGLDERVDEELLWELFLQFGPVVSVSMPKDKVLNKHMEFAFIEYQSEIDAEY 68
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A + I TLY R +R S +D+
Sbjct: 69 ASHVCDNI-TLYGRKIRVNKSNKDR 92
Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRV-VDLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++I NL V E ++ Q G++ + I RD ET+ KG AFV Y S E +
Sbjct: 98 GADLFISNLAPDVTEDMIKTTFSQFGQLACEPIIARDPETNISKGHAFVNYTSFESSDFV 157
Query: 89 IKLFSG 94
I+ +G
Sbjct: 158 IESMNG 163
>gi|328860868|gb|EGG09973.1| hypothetical protein MELLADRAFT_71116 [Melampsora larici-populina
98AG31]
Length = 382
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 25 GNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEI 84
G+ N VY+GNLDE+ + +++++++QAG VV++++P+D+ + +G+ F E+ +E+
Sbjct: 7 GDRNQEATVYMGNLDERCTDALVWELMLQAGPVVNVHLPKDRVSMSHQGYGFCEFLTEDD 66
Query: 85 GHYAIKLFSGIVTLYNRTLRFALSGQDK 112
YA K+ + I LY + +R + D+
Sbjct: 67 AEYACKIMNQI-KLYGKPIRVNKASSDR 93
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLY-IPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD V+ER+LYD G +V I R+ T + G+ FV YES E A
Sbjct: 99 GANLFIGNLDVNVDERMLYDTFNTFGTLVQTAKIARNPSTGQSNGYGFVAYESFESADTA 158
Query: 89 IKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVP 135
I+ +G L N+ T+++A K ++ + L+++ +++ +P
Sbjct: 159 IESMNGQF-LMNKAITVQYAFKKDGKGERHGTPAERLLAAQARKNNALP 206
>gi|358389660|gb|EHK27252.1| hypothetical protein TRIVIDRAFT_229059 [Trichoderma virens Gv29-8]
Length = 385
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGN+DE+ ++Y+I++Q G + ++++PRD+ T +GF FVE+ + YA
Sbjct: 13 ATVYIGNIDERATSTMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPADAEYAAN 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ +GI LY ++LR + DK
Sbjct: 73 VMNGI-KLYGKSLRVNKASADKQ 94
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G ++IGNLD V+E++LYD + G ++ + +++ KGF FV Y E AI
Sbjct: 100 GAELFIGNLDPMVDEKILYDTFSRFGPLLSIPKVAREDSGASKGFGFVSYGDFESSDAAI 159
Query: 90 KLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSR-KSR 130
G L ++++A K ++ L+++ KSR
Sbjct: 160 SNLHGQYILSKEVSVQYAFKKDGKGERHGDQAERALAAQAKSR 202
>gi|452841107|gb|EME43044.1| hypothetical protein DOTSEDRAFT_25030 [Dothistroma septosporum
NZE10]
Length = 388
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+GNLDE+ + +++++++QAG V+++++P+D+ T +G+ FVE+ SE+ YA K+
Sbjct: 15 LYVGNLDERCTDALVWELMLQAGPVINVHLPKDRVTQSHQGYGFVEFGSEDDADYACKIM 74
Query: 93 SGIVTLYNRTLRFALSGQDK 112
+ I L+ + +R + DK
Sbjct: 75 NQI-RLWGKPIRVNKASADK 93
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 34 YIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+IGNLD +E+VLY+ + G +V + RD E++ KG+ FV Y + E AI+
Sbjct: 112 FIGNLDSLADEKVLYETFSRFGPLVAAPKVARD-ESNLSKGYGFVSYATFESSDQAIEHM 170
Query: 93 SG 94
G
Sbjct: 171 HG 172
>gi|340522320|gb|EGR52553.1| predicted protein [Trichoderma reesei QM6a]
Length = 386
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGN+DE+ ++Y+I++Q G + ++++PRD+ T +GF FVE+ + YA
Sbjct: 8 ATVYIGNIDERATPAMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPADAEYAAN 67
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ +GI LY ++LR + DK
Sbjct: 68 VMNGI-KLYGKSLRVNKASADKQ 89
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G ++IGNLD V+E++LYD + G ++ + +++ KGF FV Y E AI
Sbjct: 95 GAELFIGNLDPMVDEKILYDTFSRFGPLLSIPKVAREDSGASKGFGFVSYGDFESSDAAI 154
Query: 90 KLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVP 135
G L ++++A K ++ L+++ + +P
Sbjct: 155 ANLHGQYILSKEVSVQYAFKKDGKGERHGDPAERALAAQAKARNLLP 201
>gi|384494999|gb|EIE85490.1| hypothetical protein RO3G_10200 [Rhizopus delemar RA 99-880]
Length = 246
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VYIGNLDE+ E +++++++QAG VV++++P+D+ T + + FVE+ +EE Y
Sbjct: 8 NQEATVYIGNLDERCTESLIWELMLQAGPVVNVHLPKDRVTQTHQNYGFVEFLTEEDADY 67
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A+K+ + V LY + +R + D+
Sbjct: 68 AMKIMNQ-VRLYGKPVRVNKATSDR 91
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 84
N + G ++IGNLD +V+E++LYD G +V+ I RD +T KGF F+ Y++ E
Sbjct: 93 NLDVGATLFIGNLDPEVDEKILYDTFSAFGLIVNTPRISRDPDTGALKGFGFISYDNFES 152
Query: 85 GHYAIKLFSG 94
AI+ G
Sbjct: 153 SDAAIEAMDG 162
>gi|46125929|ref|XP_387518.1| hypothetical protein FG07342.1 [Gibberella zeae PH-1]
Length = 357
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGN+DE+ ++Y+I++Q G + ++++PRD+ T +GF FVE+ + YA
Sbjct: 13 ATVYIGNIDERATSAMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPTDAEYAAN 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ +GI LY ++LR + DK
Sbjct: 73 VMNGI-KLYGKSLRVNKASADKQ 94
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G ++IGNLD V+E++LYD + G ++ L +E+ KGF FV + E AI
Sbjct: 100 GAELFIGNLDSMVDEKILYDTFSRFGPLLSLPKVAREESGASKGFGFVSFADFESSDAAI 159
Query: 90 KLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVP 135
G L ++++A K ++ L++ + + VP
Sbjct: 160 DTLHGQYILSKEVSVQYAFKKDGKGERHGDQAERSLAAEAKKRNIVP 206
>gi|408396492|gb|EKJ75649.1| hypothetical protein FPSE_04150 [Fusarium pseudograminearum CS3096]
Length = 357
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGN+DE+ ++Y+I++Q G + ++++PRD+ T +GF FVE+ + YA
Sbjct: 13 ATVYIGNIDERATSAMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPTDAEYAAN 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ +GI LY ++LR + DK
Sbjct: 73 VMNGI-KLYGKSLRVNKASADKQ 94
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G ++IGNLD V+E++LYD + G ++ L +E+ KGF FV + E AI
Sbjct: 100 GAELFIGNLDSMVDEKILYDTFSRFGPLLSLPKVAREESGASKGFGFVSFADFESSDAAI 159
Query: 90 KLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVP 135
G L ++++A K ++ L++ + + VP
Sbjct: 160 DTLHGQYILSKEVSVQYAFKKDGKGERHGDQAERSLAAEAKKRNIVP 206
>gi|342879058|gb|EGU80333.1| hypothetical protein FOXB_09130 [Fusarium oxysporum Fo5176]
Length = 375
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
VYIGN+DE+ ++Y+I++Q G + ++++PRD+ T +GF FVE+ + YA
Sbjct: 31 ATVYIGNIDERATSAMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPTDAEYAAN 90
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ +GI LY ++LR + DK
Sbjct: 91 VMNGI-KLYGKSLRVNKASADKQ 112
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G ++IGNLD V+E++LYD + G ++ L +E+ KGF FV + E AI
Sbjct: 118 GAELFIGNLDPMVDEKILYDTFSRFGPLLSLPKVAREESGASKGFGFVSFADFESSDAAI 177
Query: 90 KLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVP 135
G L ++++A K ++ L+++ + + VP
Sbjct: 178 ANLHGQYILSKEVSVQYAFKKDGKGERHGDEAERELAAQAKKRNIVP 224
>gi|449301395|gb|EMC97406.1| hypothetical protein BAUCODRAFT_33122 [Baudoinia compniacensis UAMH
10762]
Length = 389
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+GNLDE+ + +++++++QAG V+++++P+D+ T +G+ FVE+ SEE YA K+
Sbjct: 15 LYVGNLDERCTDSLVWELMLQAGPVINVHLPKDRVTQTHQGYGFVEFGSEEDADYAAKIM 74
Query: 93 SGIVTLYNRTLRFALSGQDK 112
+ I L+ + +R + D+
Sbjct: 75 NQI-RLWGKPIRVNKASADR 93
>gi|321479244|gb|EFX90200.1| hypothetical protein DAPPUDRAFT_40110 [Daphnia pulex]
Length = 268
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+G LDEKV E +L+++ +Q G VV++++P+D+ T +G+ F+E+ SE+ Y
Sbjct: 10 NQDATIYVGGLDEKVTEPLLWELFVQGGPVVNVHMPKDRITLLHQGYGFIEFLSEDDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
A K+ + ++ LY + +R
Sbjct: 70 ACKIMN-MIKLYGKPIR 85
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD T KGFAF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPTTGNSKGFAF 146
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S + AI+ +G L NR T+ +A K ++ S L+++
Sbjct: 147 INFASFDASDAAIEAMNG-QYLCNRPITISYAFKKDSKGERHGSAAERLLAAQ 198
>gi|302693156|ref|XP_003036257.1| hypothetical protein SCHCODRAFT_50059 [Schizophyllum commune H4-8]
gi|300109953|gb|EFJ01355.1| hypothetical protein SCHCODRAFT_50059 [Schizophyllum commune H4-8]
Length = 329
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 60/94 (63%), Gaps = 5/94 (5%)
Query: 23 MSG----NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVE 78
MSG + N VY+GNLDE+V + +++++++QAG VV++++P+D+ + +G+ F E
Sbjct: 1 MSGRPQDDRNQEATVYLGNLDERVTDAIVWELMLQAGPVVNVHLPKDRISMSHQGYGFCE 60
Query: 79 YESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDK 112
+ +EE YA K+ + I L+ + +R + DK
Sbjct: 61 FLTEEDAEYACKIMNQI-KLWGKPIRVNKASSDK 93
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 9/125 (7%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLY-IPRDKETDKPKG 73
S +K+Q+ + G N++IGNLDE V+ER+LYD G + + RD T KG
Sbjct: 89 ASSDKKQL-----DVGANLFIGNLDENVDERLLYDTFSAFGMMATTAKVARDPGTGTSKG 143
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ FV + E AI+ +G L N+ T+++A K ++ + L+++ ++
Sbjct: 144 YGFVSFTDFEASDAAIEAMNGQF-LMNKAITVQYAFKKDGKGERHGTSAERLLAAQARKN 202
Query: 132 DPVPM 136
+ +PM
Sbjct: 203 NALPM 207
>gi|260800952|ref|XP_002595360.1| hypothetical protein BRAFLDRAFT_118991 [Branchiostoma floridae]
gi|229280606|gb|EEN51372.1| hypothetical protein BRAFLDRAFT_118991 [Branchiostoma floridae]
Length = 247
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL +V E +LY++ +QAG +V + IP D T KP+ +AF+E++ Y I+L
Sbjct: 12 LWVGNLSSQVTEELLYELFLQAGPLVGVKIPMDANTGKPRSYAFIEFKHAVSVPYTIELM 71
Query: 93 SGIVTLYNRTLRFALSGQDKNA 114
+GI L+ R+LR K+A
Sbjct: 72 NGI-RLHERSLRLQCRTGSKHA 92
>gi|402078874|gb|EJT74139.1| splicing factor 3B subunit 4 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 409
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+GNLDE+ E ++++++ Q G VV+L++P D+ + +G+ FVE++S E Y
Sbjct: 9 NKEATIYVGNLDERFGESLMWEMMTQMGPVVNLHMPMDRVSRTHQGYGFVEFDSPESADY 68
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKN 113
A + +GI +Y + +R + DK
Sbjct: 69 AARALNGI-RVYGKVIRVNKASADKQ 93
Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++ NLD +V+E+ L+D + G++V + RD + KG+ FV ++S E A
Sbjct: 99 GAELFVNNLDPQVDEKTLFDTFSRFGQLVTPPNVVRDA-NNISKGYGFVNFDSFEASDQA 157
Query: 89 IKLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVP 135
+G L + T+ +A K ++ L++ + + VP
Sbjct: 158 RDTMNGQYLLSKQITVEYAYKKDGKGERHGDDAERKLAAEGKKHNIVP 205
>gi|398394106|ref|XP_003850512.1| hypothetical protein MYCGRDRAFT_46623 [Zymoseptoria tritici IPO323]
gi|339470390|gb|EGP85488.1| hypothetical protein MYCGRDRAFT_46623 [Zymoseptoria tritici IPO323]
Length = 343
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+GNLDE+ + +++++++QAG V+++++PRD+ T +G+ FVE+ SE+ YA K+
Sbjct: 15 LYVGNLDERCTDALVWELMLQAGPVINVHLPRDRVTQNHQGYGFVEFGSEDDADYACKIM 74
Query: 93 SGIVTLYNRTLRFALSGQDKNA 114
+ I ++ + +R + DK A
Sbjct: 75 NQI-RVHGKPIRVNKASADKRA 95
Score = 43.5 bits (101), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 30/155 (19%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYAI 89
+++GNLD V+E+VLY+ I+ G++V I RD + + KG+ FV Y E AI
Sbjct: 107 AELFVGNLDSLVDEKVLYETFIRFGQLVAAPKIARD-DANLSKGYGFVSYAGFEASDAAI 165
Query: 90 KLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSRKSR------------------ 130
+ G + T+++A K ++ L+++ +
Sbjct: 166 EHMHGQYLMNKEVTVQYAYKKDGKGERHGDEAERALAAQAKKHGVEVAIPALPAALVMPQ 225
Query: 131 -SDPVPMPVNGMEISHHSMRISVPRHYSSEEPPPP 164
+ P +NGM + P Y PPPP
Sbjct: 226 NTPQAPAAMNGM--------ATTPVGYGMGYPPPP 252
>gi|390598508|gb|EIN07906.1| hypothetical protein PUNSTDRAFT_88604 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 343
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
+ N VY+GNLDE+ + ++++++IQAG VV++++P+D+ + +G+ F E+ +EE
Sbjct: 7 DRNQEATVYLGNLDERCTDALIWELMIQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDA 66
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDK 112
YA K+ + I L+ + +R + DK
Sbjct: 67 EYACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 19/154 (12%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRV-VDLYIPRDKETDKPKG 73
S +K+Q+ + G N++IGNLDE V+ERVLYD G + I RD T + KG
Sbjct: 88 ASSDKKQL-----DVGANLFIGNLDENVDERVLYDTFSAFGVISTTAKIARDPSTGQSKG 142
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ FV Y E AI+ +G L N+ T+++A K ++ + L+++ ++
Sbjct: 143 YGFVSYTDFESSDAAIESMNGQF-LMNKPITVQYAFKKDGKGERHGTPAERLLAAQARKN 201
Query: 132 DPVPMPVNGMEISHHSMRISVPRHYSSEEPPPPG 165
+ +P+ + R + P +++ P PG
Sbjct: 202 NALPV----------AARTAAPGMFAAGRPGFPG 225
>gi|58261610|ref|XP_568215.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115791|ref|XP_773609.1| hypothetical protein CNBI2230 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256235|gb|EAL18962.1| hypothetical protein CNBI2230 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230297|gb|AAW46698.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 304
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
+ N VY+GNLDE+ + +++++++QAG V ++++P+D+ + +GF F E+ SE
Sbjct: 8 DRNQEATVYLGNLDERCTDALIWELMLQAGPVSNVFLPKDRISQAHQGFGFCEFMSEADA 67
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDK 112
YA+K+ + I LY + +R + DK
Sbjct: 68 EYAVKIMNQI-KLYGKPIRVNKASYDK 93
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
S +K+Q+ + G N+++GNLD V+E+ LYD G + + I RD T KG
Sbjct: 89 ASYDKKQV-----DVGANLFVGNLDPNVDEQTLYDTFSTFGTLAEQPKIARDPTTGLSKG 143
Query: 74 FAFVEYESEEIGHYAIKLFSG-IVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSD 132
AF+ Y E AI+ +G T ++A K ++ S L+++ +
Sbjct: 144 HAFIAYNDFEAADLAIENMNGQFFGGKQITAQYAFKKDGKGERHGSQAERLLAAQAKKRQ 203
Query: 133 PVP 135
+P
Sbjct: 204 LLP 206
>gi|393238609|gb|EJD46145.1| hypothetical protein AURDEDRAFT_113809 [Auricularia delicata
TFB-10046 SS5]
Length = 312
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
+ N VY+GNLDE+V + +++++++QAG VV++++P+D+ + +G+ F E+ +EE
Sbjct: 7 DRNQEATVYLGNLDERVTDAIVWELMLQAGPVVNVHLPKDRISMSHQGYGFCEFLTEEDA 66
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDK 112
YA K+ + I L+ + +R + DK
Sbjct: 67 EYACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 9/125 (7%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRV-VDLYIPRDKETDKPKG 73
S +K+Q+ + G N++IGNLDE V+ER+LYD G + I RD +T KG
Sbjct: 88 ASSDKKQL-----DVGANLFIGNLDENVDERLLYDTFTAFGLLSAPAKIARDPQTMASKG 142
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ F+ Y E AI+ +G L N+ T+++A K ++ + L+++ ++
Sbjct: 143 YGFISYADFESSDAAIENMNG-QYLMNKPITVQYAFKKDGKGERHGTPAERLLAAQARKN 201
Query: 132 DPVPM 136
+ +P
Sbjct: 202 NALPF 206
>gi|45185171|ref|NP_982888.1| ABL059Wp [Ashbya gossypii ATCC 10895]
gi|44980807|gb|AAS50712.1| ABL059Wp [Ashbya gossypii ATCC 10895]
gi|374106091|gb|AEY95001.1| FABL059Wp [Ashbya gossypii FDAG1]
Length = 204
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
+ N+ C VY+GNLD +V++ +LY++ +Q V + P+DK + +GFAFVE SE
Sbjct: 2 DQNTECTVYVGNLDPQVSKELLYELFVQVAPVSRIRYPKDKVKQEHQGFAFVELFSEADC 61
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSS 118
+AIK + V+L+ + L+ + + NA+NS+
Sbjct: 62 DFAIKSLNNTVSLFGKVLKVRRTLE--NAKNSA 92
>gi|190344642|gb|EDK36359.2| hypothetical protein PGUG_00457 [Meyerozyma guilliermondii ATCC
6260]
Length = 229
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 68/115 (59%), Gaps = 3/115 (2%)
Query: 20 RQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY 79
R+ + N +Y+GNLD +VNE +LY++LIQ + L +P+D+ + +G+ FVE+
Sbjct: 6 RKPADADRNVKATLYVGNLDPQVNEALLYELLIQFAPIRSLNLPKDRVSGTHQGYGFVEF 65
Query: 80 ESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPV 134
E +Y +++ G V LY ++L+ L D N++ ++ TT+ ++ S ++ V
Sbjct: 66 RGIEDANYVLEILRG-VRLYGKSLK--LRRADPNSRGAAGTTSNFANNNSVTNAV 117
>gi|405119657|gb|AFR94429.1| splicing factor 3b subunit 4 [Cryptococcus neoformans var. grubii
H99]
Length = 304
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+GNLDE+ + +++++++QAG V ++++P+D+ + +GF F E+ SE Y
Sbjct: 10 NQEATVYLGNLDERCTDALIWELMLQAGPVSNVFLPKDRISQAHQGFGFCEFMSEADAEY 69
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A+K+ + I LY + +R + DK
Sbjct: 70 AVKIMNQI-KLYGKPIRVNKASYDK 93
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKG 73
S +K+Q+ + G N+++GNLD V+E+ LYD G + + I RD T KG
Sbjct: 89 ASYDKKQV-----DVGANLFVGNLDPNVDEQTLYDTFSTFGTLAEQPKIARDPTTGLSKG 143
Query: 74 FAFVEYESEEIGHYAIKLFSG-IVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSD 132
AF+ Y E AI+ +G T ++A K ++ S L+++ +
Sbjct: 144 HAFIAYNDFEAADLAIENMNGQFFGGKQITAQYAFKKDGKGERHGSQAERLLAAQAKKRQ 203
Query: 133 PVP 135
+P
Sbjct: 204 LLP 206
>gi|326933347|ref|XP_003212767.1| PREDICTED: RNA-binding protein 7-like [Meleagris gallopavo]
Length = 277
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 11/132 (8%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNLD KV E +++++ QAG V+ + IP+DK+ K K FAFV ++ EE Y + L
Sbjct: 12 LFVGNLDPKVTEELIFELFHQAGPVIKVKIPKDKDG-KQKQFAFVSFKHEESVPYGMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMTTTPLSSRKSRSDPVPMPV-------NGM-EI 143
+GI LY R + SG +Q+S++ P + P P +GM
Sbjct: 71 NGI-KLYGRPINIQFRSGSSHASQDSNLACLPHGAASLGPSGTPHPASRYDRNTDGMVAA 129
Query: 144 SHHSMRISVPRH 155
SM+ S+P H
Sbjct: 130 GFSSMQRSLPSH 141
>gi|449543395|gb|EMD34371.1| hypothetical protein CERSUDRAFT_140831 [Ceriporiopsis subvermispora
B]
Length = 323
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
+ N VY+GNLDE+ ++ +++++++QAG VV++++P+D+ + +G+ F E+ +EE
Sbjct: 7 DRNQEATVYLGNLDERCSDALIWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDA 66
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDK 112
YA K+ + I L+ + +R + DK
Sbjct: 67 EYACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 9/125 (7%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAG-RVVDLYIPRDKETDKPKG 73
S +K+Q+ + G N++IGNLDE V+ER+LYD G I RD T K KG
Sbjct: 88 ASSDKKQL-----DVGANLFIGNLDENVDERLLYDTFSAFGVMATTAKIARDPSTGKSKG 142
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ FV Y E A++ +G L N+ T+++A K ++ + L+++ ++
Sbjct: 143 YGFVSYTDFESSDAAVESMNGQF-LMNKAITVQYAFKKDGKGERHGTPAERLLAAQARKN 201
Query: 132 DPVPM 136
+ +P+
Sbjct: 202 NALPV 206
>gi|409082711|gb|EKM83069.1| hypothetical protein AGABI1DRAFT_118461 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200576|gb|EKV50500.1| hypothetical protein AGABI2DRAFT_183573 [Agaricus bisporus var.
bisporus H97]
Length = 296
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
+ N VY+GNLDE+ + +++++++QAG VV++++P+D+ + +G+ F E+ +EE
Sbjct: 7 DRNQEATVYLGNLDERCTDALIWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDA 66
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDK 112
YA K+ + I L+ + +R + DK
Sbjct: 67 EYACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 28/173 (16%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLY-IPRDKETDKPKG 73
S +K+Q+ + G N++IGNLDE V+ER+LYD G + I RD + KG
Sbjct: 88 ASSDKKQL-----DVGANLFIGNLDENVDERLLYDTFSAFGMMATTAKIARDTGSGISKG 142
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRK--- 128
+ FV Y E AI+ +G L N+ T+++A + K ++ + L+++
Sbjct: 143 YGFVSYTDFESSDAAIESMNGQF-LMNKAITVQYAFKKEGKGERHGTAAERLLAAQARKN 201
Query: 129 ------SRSDPVPM------PVNGMEISHHSMRISVPRHYSSEEPPPPGVTLE 169
+R P PM P+ G + + ++ PPPPG T +
Sbjct: 202 NALPVTARPPPAPMGFGARPPMPGYQGPYQGQFAGA----LAQPPPPPGFTAQ 250
>gi|340720106|ref|XP_003398484.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like [Bombus terrestris]
Length = 331
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
Query: 17 RNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAF 76
++ R + + ++N+ +Y+G L E+V+E+VL+ I G +VD+ IP D E++K +GFAF
Sbjct: 31 KHTRILCTMSTNTKRTIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAF 90
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSS 118
+E+ES E AI + L+ RT+R ++ K + SS
Sbjct: 91 IEFESAEDAAAAIDNMND-SELFGRTIRVNIAKPQKIKEGSS 131
>gi|409046552|gb|EKM56032.1| hypothetical protein PHACADRAFT_145047 [Phanerochaete carnosa
HHB-10118-sp]
Length = 322
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
+ N VY+GNLDE+ + +++++++QAG VV++++P+D+ + +G+ F E+ +EE
Sbjct: 7 DRNQEATVYLGNLDERCTDALIWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDA 66
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDK 112
YA K+ + I L+ + +R + DK
Sbjct: 67 EYACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 9/125 (7%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAG-RVVDLYIPRDKETDKPKG 73
S +K+Q+ + G N++IGNLDE V+ER+LYD G I RD ++ + KG
Sbjct: 88 ASSDKKQL-----DVGANLFIGNLDENVDERLLYDTFSAFGVMATTAKIARDPQSGQSKG 142
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ FV Y E AI+ +G L N+ T+++A K ++ + L+++ ++
Sbjct: 143 YGFVSYTDFESSDAAIESMNGQF-LMNKPITVQYAFKKDGKGERHGTPAERLLAAQARKN 201
Query: 132 DPVPM 136
+ +P+
Sbjct: 202 NALPV 206
>gi|350410727|ref|XP_003489121.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like [Bombus impatiens]
Length = 361
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
Query: 17 RNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAF 76
++ R + + ++N+ +Y+G L E+V+E+VL+ I G +VD+ IP D E++K +GFAF
Sbjct: 61 KHTRILCTMSTNTKRTIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAF 120
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSS 118
+E+ES E AI + L+ RT+R ++ K + SS
Sbjct: 121 IEFESAEDAAAAIDNMND-SELFGRTIRVNIAKPQKIKEGSS 161
>gi|401623525|gb|EJS41622.1| hsh49p [Saccharomyces arboricola H-6]
Length = 213
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 65/115 (56%), Gaps = 7/115 (6%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
M+ ++NSG VY+GN+D ++ + LY++ IQ ++ + P+DK +G+AF+E+ ++
Sbjct: 1 MNYSTNSGNTVYVGNIDPRITKEQLYELFIQINPILRIKYPKDKVLQTYQGYAFIEFYNK 60
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMP 137
E Y I + + V LY+R ++ +S+ TT LSS S+ +P+
Sbjct: 61 EDAQYVILIMNNTVKLYDRLIKV-------RQVTNSVGTTNLSSNSSKDISLPIA 108
>gi|302762268|ref|XP_002964556.1| hypothetical protein SELMODRAFT_3379 [Selaginella moellendorffii]
gi|302825197|ref|XP_002994230.1| hypothetical protein SELMODRAFT_3378 [Selaginella moellendorffii]
gi|300137901|gb|EFJ04697.1| hypothetical protein SELMODRAFT_3378 [Selaginella moellendorffii]
gi|300168285|gb|EFJ34889.1| hypothetical protein SELMODRAFT_3379 [Selaginella moellendorffii]
Length = 204
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N Y+GNLD +V E +L+++ Q RV +YIPRDK T G+ FVE +E Y
Sbjct: 3 NQDATAYVGNLDPQVTEDILWELFTQVARVQSVYIPRDKITTAHSGYGFVELANETAVDY 62
Query: 88 AIKLFSGIVTLYNRTLRFA-LSGQDKN 113
A+K+ + LY R +R + S +D+N
Sbjct: 63 AVKILNN-CRLYGRCIRMSKASHKDEN 88
Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
+ N G N+++GNL V+ +L I GRVV + + +P G+ FV Y+ E
Sbjct: 86 DENVGANLFVGNLSRTVDNYLLGSIFSGFGRVVYSSVVHSDDQTRP-GYGFVHYDCFEAS 144
Query: 86 HYAIK 90
AI+
Sbjct: 145 DLAIE 149
>gi|380481860|emb|CCF41594.1| splicing factor 3B subunit 4 [Colletotrichum higginsianum]
Length = 257
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
+YIGN+DE+ + ++Y+I++Q G + ++++PRD+ T +GF FVE+ + YA
Sbjct: 13 ATIYIGNIDERASPAMVYEIMLQMGPIHNIHMPRDRVTQNHQGFGFVEFRTPGDAEYAAN 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKNAQ 115
+ +GI LY ++LR + DK Q
Sbjct: 73 VMNGI-KLYGKSLRVNKASADKQKQ 96
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G +++GNLD V+E++LYD + G +V+L +++ KGF F+ Y E AI
Sbjct: 100 GAELFVGNLDPMVDEKILYDTFSRFGPLVNLPKVAREDSGNSKGFGFISYADFESSDAAI 159
Query: 90 KLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVP 135
G L ++++A K ++ L+++ + + VP
Sbjct: 160 SNLHGQYILSKEVSVQYAFKKDGKGERHGDAAERELAAQAKKRNIVP 206
>gi|146422279|ref|XP_001487080.1| hypothetical protein PGUG_00457 [Meyerozyma guilliermondii ATCC
6260]
Length = 229
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 20 RQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY 79
R+ + N +Y+GNLD +VNE +LY++LIQ + L +P+D+ +G+ FVE+
Sbjct: 6 RKPADADRNVKATLYVGNLDPQVNEALLYELLIQFAPIRSLNLPKDRVLGTHQGYGFVEF 65
Query: 80 ESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPV 134
E +Y +++ G V LY ++L+ L D N++ ++ TT+ ++ S ++ V
Sbjct: 66 RGIEDANYVLEILRG-VRLYGKSLK--LRRADPNSRGAAGTTSNFANNNSVTNAV 117
>gi|332028166|gb|EGI68217.1| Peptidyl-prolyl cis-trans isomerase E [Acromyrmex echinatior]
Length = 293
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
MSGN+ +Y+G L E+V+E+VL+ I G +VD+ IP D E++K +GFAF+E+E+
Sbjct: 1 MSGNTKR--TIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFETA 58
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSS 118
E AI + L+ RT+R ++ K + SS
Sbjct: 59 EDAAAAIDNMND-SELFGRTIRVNIAKPQKIKEGSS 93
>gi|320587367|gb|EFW99847.1| splicing factor 3b subunit 4 [Grosmannia clavigera kw1407]
Length = 414
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 23 MSG---NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY 79
MSG N VY+GNLDE+ +E ++++++ Q G VV++++P D+ + +GF FVE+
Sbjct: 1 MSGRHWEQNKEATVYVGNLDERFSEPLMWELMTQMGPVVNVHMPMDRVSRLHQGFGFVEF 60
Query: 80 ESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDKN 113
++ E YA + +GI LY + +R + D+
Sbjct: 61 DTPESAEYASRTLNGI-RLYGKPVRVNKASADRQ 93
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYES 81
G +++ NLD +V+E++LYD Q GR+V + RD+ KG+ FV ++S
Sbjct: 99 GAELFVNNLDPQVDEKILYDTFAQFGRLVAPPNVVRDQNNIS-KGYGFVSFDS 150
>gi|326430602|gb|EGD76172.1| splicing factor 3b [Salpingoeca sp. ATCC 50818]
Length = 256
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LD++ E +L+++ QAG VV +++P+D+ T +G+ FVE+ EE Y
Sbjct: 9 NQDATVYVGGLDDRATESLLWELFQQAGPVVSVHMPKDRVTGLHQGYGFVEFLGEEDAEY 68
Query: 88 AIKLFSGIVTLYNRTLR 104
A+K+ + ++ LY + +R
Sbjct: 69 ALKIMN-MINLYGKPIR 84
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + + G N+YIGNLD V+E++LYD G ++ I RD +T KG+AF
Sbjct: 86 NKAASHTRTQDVGANLYIGNLDPSVDEKLLYDTFSAFGVILQHPKIMRDPDTGASKGYAF 145
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNRTLR--FALSGQDKNAQNSSMTTTPLSSRKSRSDPV 134
V Y + E AIK +G L NR + +A K ++ S L+++K
Sbjct: 146 VNYANFEASDAAIKAMNGQY-LCNRNINVTYAFKKDTKGERHGSAAERLLAAQK------ 198
Query: 135 PMPVNGMEISHHSMRISVPRHYSSEEPPPP 164
PV + H P + +P PP
Sbjct: 199 --PVIKTDQKPHQYFAEKPNAAPTFQPGPP 226
>gi|406602156|emb|CCH46282.1| Spliceosome-associated protein 49 [Wickerhamomyces ciferrii]
Length = 210
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Query: 19 KRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVE 78
KR I S + N C VY+GNLDEKV++ +LY++ IQ + ++++P+D+ +G+ FVE
Sbjct: 3 KRGIES-DRNQDCTVYVGNLDEKVHDGLLYELFIQIAPIKNIHLPKDRILRTHQGYGFVE 61
Query: 79 YESEEIGHYAIKLFSGIVTLYNRTLR 104
+++ + YA K+ +GI LY + LR
Sbjct: 62 FKNVKDTEYAEKIMNGI-KLYGKNLR 86
>gi|357625711|gb|EHJ76061.1| hypothetical protein KGM_12160 [Danaus plexippus]
Length = 205
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 77/150 (51%), Gaps = 22/150 (14%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V+ GNL E+V E +LY++ +QAG V + IP+DK+ + K FAF+ Y E YAI LF
Sbjct: 9 VWCGNLSEQVTEELLYELFVQAGPVEKVIIPKDKD-GRQKNFAFITYCHEVSVPYAINLF 67
Query: 93 SGIVTLYNRTL------RFAL-----------SGQDKNAQNS-SMTTTPLSSRKSRSDPV 134
G L++RTL R AL + D NAQ+S + T ++ + +P
Sbjct: 68 RG-TALFHRTLLLQNRGRMALLPPPIRCYGPEASLDFNAQSSVTQQFTDMTDKLKEENPQ 126
Query: 135 P--MPVNGMEISHHSMRISVPRHYSSEEPP 162
P +P ++S + S+ ++S+ P
Sbjct: 127 PAHLPTQRQDMSDKLVVASLQGNWSNRHHP 156
>gi|299754121|ref|XP_001833772.2| splicing factor 3b subunit 4 [Coprinopsis cinerea okayama7#130]
gi|298410613|gb|EAU88064.2| splicing factor 3b subunit 4 [Coprinopsis cinerea okayama7#130]
Length = 332
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
+ N VY+GNLDE+ + +++++++QAG VV++++P+D+ + +G+ F E+ +EE
Sbjct: 7 DRNQEATVYLGNLDERCTDALIWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDA 66
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDK 112
YA K+ + I L+ + +R + DK
Sbjct: 67 EYACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLY-IPRDKETDKPKG 73
S +K+Q+ + G N+++GNLDE V+ER+LYD G + I RD T KG
Sbjct: 88 ASSDKKQL-----DVGANLFVGNLDENVDERLLYDTFSAFGMMATTAKIARDPSTGVSKG 142
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKN 113
+ FV Y E AI+ +G L N+ T+++A K
Sbjct: 143 YGFVSYTDFESSDAAIESMNGQF-LMNKAITVQYAFKKDGKG 183
>gi|392596200|gb|EIW85523.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 322
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+GNLDE+ ++ +++++++QAG VV++++P+D+ + +G+ F E+ +EE Y
Sbjct: 9 NQEATVYLGNLDERCSDALVWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDAEY 68
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A K+ + I L+ + +R + DK
Sbjct: 69 ACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 9/124 (7%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLY-IPRDKETDKPKG 73
S +K+Q+ + G N++IGNLD+ V+ER+LYD G + I RD + KG
Sbjct: 88 ASSDKKQL-----DVGANLFIGNLDDNVDERLLYDTFSAFGLMATTAKIARDPGSGMSKG 142
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ FV Y E A++ +G L N+ T+++A K ++ + L+++ ++
Sbjct: 143 YGFVSYIDFESSDAAVEAMNGQY-LMNKPLTVQYAFKKDGKGERHGTSAERTLAAQARKN 201
Query: 132 DPVP 135
+ +P
Sbjct: 202 NALP 205
>gi|389644502|ref|XP_003719883.1| splicing factor 3B subunit 4 [Magnaporthe oryzae 70-15]
gi|351639652|gb|EHA47516.1| splicing factor 3B subunit 4 [Magnaporthe oryzae 70-15]
gi|440470016|gb|ELQ39105.1| splicing factor 3B subunit 4 [Magnaporthe oryzae Y34]
gi|440486255|gb|ELQ66139.1| splicing factor 3B subunit 4 [Magnaporthe oryzae P131]
Length = 407
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
N VY+GNLDE+ E ++++++ Q G VV+L++P D+ + +G+ FVE+++ E
Sbjct: 8 QNKEATVYVGNLDERFGEALMWEMMTQMGPVVNLHMPMDRVSRTHQGYGFVEFDTPESAD 67
Query: 87 YAIKLFSGIVTLYNRTLRFALSGQDKN 113
YA + +GI ++ + +R + DK
Sbjct: 68 YAARALNGI-RVFGKVIRVNKASADKQ 93
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++ NLD +V+E++L+D + G++V + RD KG+ FV ++S E A
Sbjct: 99 GAELFVNNLDPQVDEKILFDTFSRFGQLVTPPNVVRDANNIS-KGYGFVNFDSFEASDTA 157
Query: 89 IKLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVP 135
+G L + T+ +A K ++ L++ + + VP
Sbjct: 158 RDTMNGQYLLSKQITVEYAYKKDGKGERHGDEAERKLAAEGKKHNIVP 205
>gi|396494938|ref|XP_003844425.1| hypothetical protein LEMA_P020760.1 [Leptosphaeria maculans JN3]
gi|312221005|emb|CBY00946.1| hypothetical protein LEMA_P020760.1 [Leptosphaeria maculans JN3]
Length = 344
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY GNL E+V R+L+++++ AGRV ++ +P D+ + +GF FVEY +EE Y
Sbjct: 12 NKEATVYCGNLHERVTPRILHELMLNAGRVRNVNMPVDRVNGQHQGFGFVEYHTEEEADY 71
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A K+ + I LY +R + DK
Sbjct: 72 APKIMNNI-ALYGTRIRVNKASADK 95
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 84
N G ++IGNLD V+E+ LYD Q G +V+ I RD E + KG+ F+ Y E
Sbjct: 98 NVEIGAELFIGNLDAMVDEKTLYDTFGQFGPLVNAPKIARD-EANLSKGYGFISYGDFES 156
Query: 85 GHYAIKLFSG 94
AI G
Sbjct: 157 SDAAIASMHG 166
>gi|403417817|emb|CCM04517.1| predicted protein [Fibroporia radiculosa]
Length = 325
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
+ N VY+GNLDE+ ++ +++++++QAG VV++++P+D+ + +G+ F E+ +EE
Sbjct: 7 DRNQEATVYLGNLDERCSDALVWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDA 66
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDK 112
YA K+ + I L+ + +R + DK
Sbjct: 67 EYACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 9/125 (7%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAG-RVVDLYIPRDKETDKPKG 73
S +K+Q+ + G N++IGNLDE V+ER+LYD G I RD + K KG
Sbjct: 88 ASSDKKQL-----DVGANLFIGNLDENVDERLLYDTFSAFGVMATTAKIARDPGSGKSKG 142
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ FV + E AI+ +G L N+ T+++A K ++ + L+++ ++
Sbjct: 143 YGFVSFTDFESSDAAIESMNGQF-LMNKAITVQYAFKKDGKGERHGTPAERLLAAQARKN 201
Query: 132 DPVPM 136
+ +P+
Sbjct: 202 NALPV 206
>gi|384500250|gb|EIE90741.1| hypothetical protein RO3G_15452 [Rhizopus delemar RA 99-880]
Length = 246
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+GNLDE+ E +++++++QAG VV++++P+D+ T + + FVE+ +EE Y
Sbjct: 8 NQEATVYVGNLDERCTESLIWELMLQAGPVVNVHLPKDRVTQTHQNYGFVEFLTEEDADY 67
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A+++ + V LY + +R + D+
Sbjct: 68 AMRVMNQ-VRLYGKPVRVNKATSDR 91
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 84
N + G ++IGNLD +V+E++LYD G +V+ + RD +T KGF F+ +++ E
Sbjct: 93 NLDVGATLFIGNLDPEVDEKLLYDTFSAFGLIVNTPRVSRDPDTGALKGFGFISFDNFES 152
Query: 85 GHYAIKLFSG 94
AI+ G
Sbjct: 153 SDAAIEAMDG 162
>gi|344293100|ref|XP_003418262.1| PREDICTED: RNA-binding protein 7-like [Loxodonta africana]
Length = 268
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLEAKVTEEILFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSM 119
+GI L+ R ++ SG Q+ SM
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHALQDVSM 97
>gi|440293376|gb|ELP86502.1| splicing factor 3B subunit, putative [Entamoeba invadens IP1]
Length = 199
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 54/78 (69%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V +LD++V+E +LY+++IQAG V+ + IPRD+ + + +G +VEY+S+ Y++K+F
Sbjct: 17 VCCTDLDQQVSEGLLYELMIQAGPVMSVSIPRDRVSGQHRGVGYVEYKSDRDADYSVKIF 76
Query: 93 SGIVTLYNRTLRFALSGQ 110
S V L+ + ++F S Q
Sbjct: 77 SDNVYLFGKLVKFNRSNQ 94
Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 21 QIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKG--FAFVE 78
Q+ G + G N+++ NLD+ V+E +L+ G +V P TD G +AF+
Sbjct: 94 QVRRGAIDIGANLFVNNLDKSVDESLLHSTFCNFGNLVS---PPKINTDTKSGKVYAFIN 150
Query: 79 YESEEIGHYAIKLFSG 94
Y+S + AI +G
Sbjct: 151 YDSFDAADKAIANLNG 166
>gi|383862957|ref|XP_003706949.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like, partial [Megachile rotundata]
Length = 326
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 8/109 (7%)
Query: 15 VSRNKRQI-----MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETD 69
+ +NK+ I MS N+ +Y+G L E+V+E++L+ I G +VD+ IP D E++
Sbjct: 21 IQKNKKSINISYIMSTNTKR--TIYVGGLAEEVDEKILHAAFIPFGEIVDVQIPLDYESE 78
Query: 70 KPKGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSS 118
K +GFAF+E+ES E AI + L+ RT+R ++ K + SS
Sbjct: 79 KHRGFAFIEFESAEDAATAIDNMND-SELFGRTIRVNIAKPQKIKEGSS 126
>gi|395330318|gb|EJF62702.1| hypothetical protein DICSQDRAFT_104224 [Dichomitus squalens
LYAD-421 SS1]
Length = 344
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
+ N VY+GNLDE+ + +++++++QAG VV++++P+D+ + +G+ F E+ +EE
Sbjct: 7 DRNQEATVYLGNLDERCTDALIWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDA 66
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDK 112
YA K+ + I L+ + +R + DK
Sbjct: 67 EYACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLY-IPRDKETDKPKG 73
S +K+Q+ + G N++IGNLDE V+ER+LYD G + I RD +T K KG
Sbjct: 88 ASSDKKQL-----DVGANLFIGNLDENVDERLLYDTFSAFGMMATTAKIARDPQTGKSKG 142
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ FV Y E AI+ +G L N+ T+++A K ++ + L+++ ++
Sbjct: 143 YGFVSYTDFESSDAAIESMNGQF-LMNKAITVQYAFKKDGKGERHGTPAERLLAAQARKN 201
Query: 132 D 132
+
Sbjct: 202 N 202
>gi|392567732|gb|EIW60907.1| hypothetical protein TRAVEDRAFT_146596 [Trametes versicolor
FP-101664 SS1]
Length = 337
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+GNLDE+ ++ +++++++QAG VV++++P+D+ + +G+ F E+ +EE Y
Sbjct: 9 NQEATVYLGNLDERCSDALIWELMLQAGPVVNVHLPKDRISMTHQGYGFCEFLTEEDAEY 68
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A K+ + I L+ + +R + DK
Sbjct: 69 ACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLY-IPRDKETDKPKG 73
S +K+Q+ + G N++IGNLDE V+ER+LYD G + I RD + K KG
Sbjct: 88 ASSDKKQL-----DVGANLFIGNLDENVDERLLYDTFSAFGMMATTAKIARDPTSGKSKG 142
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ FV Y E AI+ +G L N+ T+++A K ++ + L+++ ++
Sbjct: 143 YGFVSYTDFESSDAAIESMNGQF-LMNKAITVQYAFKKDGKGERHGTPAERLLAAQARKN 201
Query: 132 D 132
+
Sbjct: 202 N 202
>gi|328782599|ref|XP_003250169.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like isoform 1
[Apis mellifera]
Length = 331
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 22 IMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYES 81
IMS N+ +Y+G L E+V+E+VL+ I G +VD+ IP D E++K +GFAF+E+ES
Sbjct: 38 IMSTNTKR--TIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFES 95
Query: 82 EEIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSS 118
E AI + L+ RT+R ++ K + SS
Sbjct: 96 AEDAAAAIDNMND-SELFGRTIRVNIAKPQKIKEGSS 131
>gi|426370525|ref|XP_004052213.1| PREDICTED: RNA-binding protein 7 isoform 2 [Gorilla gorilla
gorilla]
Length = 220
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 11 TLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKD-GKPKQFAFVNFKHEVSVPYAMNL 69
Query: 92 FSGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI LY R ++ SG Q+ S++
Sbjct: 70 LNGI-KLYGRPIKIQFRSGSSHAPQDVSLS 98
>gi|403262742|ref|XP_003945221.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 7 [Saimiri
boliviensis boliviensis]
Length = 266
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI LY R ++ SG +Q+ S++
Sbjct: 71 NGI-KLYGRPIKIQFRSGSSHASQDVSLS 98
>gi|126326634|ref|XP_001371053.1| PREDICTED: RNA-binding protein 7-like isoform 1 [Monodelphis
domestica]
Length = 276
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNLD KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ EE Y + L
Sbjct: 12 LFVGNLDCKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEESVPYGMNLL 70
Query: 93 SGIVTLYNRTLRFAL 107
+GI L+ R ++
Sbjct: 71 NGI-KLFGRPIKIQF 84
>gi|336367930|gb|EGN96274.1| hypothetical protein SERLA73DRAFT_185935 [Serpula lacrymans var.
lacrymans S7.3]
Length = 319
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
+ N VY+GNLDE+ + +++++++QAG VV++++P+D+ + +G+ F E+ +EE
Sbjct: 7 DRNQEATVYLGNLDERCTDALVWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDA 66
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDK 112
YA K+ + I L+ + +R + DK
Sbjct: 67 EYACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAG-RVVDLYIPRDKETDKPKG 73
S +K+Q+ + G N++IGNLDE V+ER+LYD G I RD T K KG
Sbjct: 88 ASSDKKQL-----DVGANLFIGNLDENVDERLLYDTFSAFGVMATTAKIARDPGTGKSKG 142
Query: 74 FAFVEYESEEIGHYAIKLFSG 94
+ F Y E A + +G
Sbjct: 143 YGFASYTDFESSDAATESMNG 163
>gi|410970206|ref|XP_003991579.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulator RBM11 [Felis
catus]
Length = 238
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 15/124 (12%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 93 SGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSDPV------PM---PVN 139
+GI LY R + RF S + A S + ++S R++ V PM P+N
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSSEPANQSFESCVKINSHSYRNEEVVGRSSFPMQFFPIN 129
Query: 140 GMEI 143
G +
Sbjct: 130 GATL 133
>gi|307189573|gb|EFN73937.1| Peptidyl-prolyl cis-trans isomerase E [Camponotus floridanus]
Length = 293
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
MSGN+ +Y+G L E+V+E+VL+ I G +VD+ IP D E++K +GFAF+E+E
Sbjct: 1 MSGNTKR--TIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFEMA 58
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSS 118
E AI + L+ RT+R ++ K + SS
Sbjct: 59 EDAAAAIDNMND-SELFGRTIRVNIAKPQKIKEGSS 93
>gi|198416256|ref|XP_002122144.1| PREDICTED: similar to GF14865 [Ciona intestinalis]
Length = 232
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 22 IMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYES 81
+MSG ++ C +++GNL +KV E +LY++ +QAG + ++IP D + + + + FV ++
Sbjct: 3 VMSG-ADDACTLFVGNLHDKVTEAILYELFLQAGPIKKVHIPVDHKNGRNRPYGFVTFKH 61
Query: 82 EEIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDP 133
E Y+IKL GI + ++L + A S T SR S P
Sbjct: 62 EVSVPYSIKLMDGI-----QVFEYSLKVDKRKASGGSGNDTNGDSRPGHSSP 108
>gi|346322787|gb|EGX92385.1| splicing factor 3b subunit 4 [Cordyceps militaris CM01]
Length = 404
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
+Y+GN+DE+ +Y+I++Q G + ++++PRD+ T +GF FVE+ + YA
Sbjct: 13 ATIYMGNIDERATPATMYEIMLQMGPIHNIHMPRDRVTQSHQGFGFVEFRTPSDAEYAAA 72
Query: 91 LFSGIVTLYNRTLRFALSGQDK 112
+ +G V LY ++LR + D+
Sbjct: 73 VMNG-VKLYGKSLRVNKASADR 93
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIG 85
++ G +++GNLD +E+VLYD + G ++ L I RD KGF F+ + +
Sbjct: 107 TDIGAELFVGNLDPSCDEKVLYDTFSRFGPLLSLPKIARDDNAVS-KGFGFISFADFDSA 165
Query: 86 HYAIKLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVP 135
AI+ SG L + T++FA K ++ + L+ + + + VP
Sbjct: 166 DEAIETLSGTYLLSQQVTVQFAFKRDGKGERHGDKSERELAMQAKKRNVVP 216
>gi|225708572|gb|ACO10132.1| RNA-binding protein 7 [Osmerus mordax]
Length = 266
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 8/96 (8%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNLD+KV E +L+++ +QAG ++ + IP+D + K K F F ++ EE Y + L
Sbjct: 11 LFVGNLDQKVTEELLFELFLQAGPLIKVKIPKDNDG-KQKSFGFAVFKHEESAPYGMNLL 69
Query: 93 SGIVTLYNRTLRFALSGQD------KNAQNSSMTTT 122
+G +L+ RTL+ +N+QNSS T
Sbjct: 70 NG-TSLFGRTLKVQFRAGSTHINSPENSQNSSPVNT 104
>gi|395520256|ref|XP_003764251.1| PREDICTED: RNA-binding protein 7 isoform 1 [Sarcophilus harrisii]
Length = 276
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNLD KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ EE Y + L
Sbjct: 12 LFVGNLDIKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEESVPYGMNLL 70
Query: 93 SGIVTLYNRTLRFAL 107
+GI L+ R ++
Sbjct: 71 NGI-KLFGRPIKIQF 84
>gi|402895331|ref|XP_003910783.1| PREDICTED: RNA-binding protein 7 [Papio anubis]
Length = 267
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI LY R ++ SG +Q+ S++
Sbjct: 71 NGI-KLYGRPIKIQFRSGSSHASQDVSLS 98
>gi|389749090|gb|EIM90267.1| hypothetical protein STEHIDRAFT_93143 [Stereum hirsutum FP-91666
SS1]
Length = 338
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
+ N VY+GNLDE+ + +++++++QAG VV++++P+D+ + +G+ F E+ +E+
Sbjct: 7 DRNQEATVYLGNLDERCTDALVWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEDDA 66
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDK 112
YA K+ + I L+ + +R + DK
Sbjct: 67 EYACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAG-RVVDLYIPRDKETDKPKG 73
S +K+Q+ + G N++IGNLDE V+ER+LYD G I RD +T + KG
Sbjct: 88 ASSDKKQL-----DVGANLFIGNLDENVDERLLYDTFSAFGVMATTAKIARDPQTGQSKG 142
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ FV Y E A++ +G L N+ T+++A K ++ + L+++ ++
Sbjct: 143 YGFVAYTDFESSDAAVESMNGQF-LMNKAITVQYAFKKDGKGERHGTPAERLLAAQARKN 201
Query: 132 D 132
+
Sbjct: 202 N 202
>gi|322696259|gb|EFY88054.1| splicing factor 3b subunit 4 [Metarhizium acridum CQMa 102]
Length = 578
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
+YIGN+DE+ +Y+I++Q G + ++++PRD+ T +GF FVE+ + YA
Sbjct: 33 ATIYIGNIDERATTATIYEIMLQMGPIHNIHMPRDRVTQNHQGFGFVEFRTPSDAEYAAN 92
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ +GI L+ ++LR + DK
Sbjct: 93 VMNGI-KLFGKSLRVNKASADKQ 114
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 84
++ G ++IGNLD V+E++LYD + G ++ L + RD ++ KGF FV + E
Sbjct: 116 GADIGAELFIGNLDPMVDEKLLYDTFSRFGPLLSLPKVARD-DSGMSKGFGFVSFGDFES 174
Query: 85 GHYAIKLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVP 135
A+ G L ++++A K ++ L+ + + + VP
Sbjct: 175 SDAAVANLDGQYMLSKEVSVQYAFKKDGKGERHGDEAERELAKQAKKRNIVP 226
Score = 43.1 bits (100), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 84
++ G ++IGNLD V+E++LYD + G ++ L + RD ++ KGF FV + E
Sbjct: 278 GADIGAVLFIGNLDPMVDEKLLYDTFSRFGPLLSLPKVARD-DSGMSKGFGFVSFGDFES 336
Query: 85 GHYAIKLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVP 135
A+ G L ++++A K ++ L+ + + + VP
Sbjct: 337 SDAAVANLDGQYMLSKEVSVQYAFKKDGKGERHGDEAERELAKQAKKRNIVP 388
>gi|55732787|emb|CAH93091.1| hypothetical protein [Pongo abelii]
Length = 264
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 9 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 67
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI LY R ++ SG +Q+ S++
Sbjct: 68 NGI-KLYGRPIKIQFRSGSSHASQDVSLS 95
>gi|297690283|ref|XP_002822554.1| PREDICTED: RNA-binding protein 7 [Pongo abelii]
Length = 267
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI LY R ++ SG +Q+ S++
Sbjct: 71 NGI-KLYGRPIKIQFRSGSSHASQDVSLS 98
>gi|296216231|ref|XP_002754472.1| PREDICTED: RNA-binding protein 7 [Callithrix jacchus]
Length = 264
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI LY R ++ SG +Q+ S++
Sbjct: 71 NGI-KLYGRPIKIQFRSGSSHASQDVSLS 98
>gi|395520258|ref|XP_003764252.1| PREDICTED: RNA-binding protein 7 isoform 2 [Sarcophilus harrisii]
Length = 270
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNLD KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ EE Y + L
Sbjct: 12 LFVGNLDIKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEESVPYGMNLL 70
Query: 93 SGIVTLYNRTLRFAL 107
+GI L+ R ++
Sbjct: 71 NGI-KLFGRPIKIQF 84
>gi|301782499|ref|XP_002926663.1| PREDICTED: RNA-binding protein 7-like [Ailuropoda melanoleuca]
gi|281353931|gb|EFB29515.1| hypothetical protein PANDA_016352 [Ailuropoda melanoleuca]
Length = 263
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 11/107 (10%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG VV + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVVKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT--------TTPLSSRKSR 130
+GI L+ + ++ SG +Q+ S++ ++P+S+ SR
Sbjct: 71 NGI-KLFGKPIKIQFRSGSSHASQDVSLSYPQHHVGNSSPISTSPSR 116
>gi|386782309|ref|NP_001248000.1| RNA-binding protein 7 [Macaca mulatta]
gi|355567065|gb|EHH23444.1| hypothetical protein EGK_06917 [Macaca mulatta]
gi|355752653|gb|EHH56773.1| hypothetical protein EGM_06248 [Macaca fascicularis]
gi|380808630|gb|AFE76190.1| RNA-binding protein 7 [Macaca mulatta]
gi|383414981|gb|AFH30704.1| RNA-binding protein 7 [Macaca mulatta]
Length = 267
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI LY R ++ SG +Q+ S++
Sbjct: 71 NGI-KLYGRPIKIQFRSGSSHASQDVSLS 98
>gi|380015375|ref|XP_003691678.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like [Apis florea]
Length = 293
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
++N+ +Y+G L E+V+E+VL+ I G +VD+ IP D E++K +GFAF+E+ES E
Sbjct: 2 STNTKRTIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFESAEDA 61
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSS 118
AI + L+ RT+R ++ K + SS
Sbjct: 62 AAAIDNMND-SELFGRTIRVNIAKPQKIKEGSS 93
>gi|57530481|ref|NP_001006318.1| RNA-binding protein 7 [Gallus gallus]
gi|53130199|emb|CAG31450.1| hypothetical protein RCJMB04_6j1 [Gallus gallus]
Length = 279
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNLD KV E +++++ QAG V+ + IP+DK+ K K FAFV ++ EE Y + L
Sbjct: 12 LFVGNLDPKVTEELIFELFHQAGPVIKVKIPKDKDG-KQKQFAFVSFKHEESVPYGMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMTTTP 123
+GI LY R + SG +Q+S+ + P
Sbjct: 71 NGI-KLYGRPINIQFRSGSSHASQDSNSSCLP 101
>gi|189189942|ref|XP_001931310.1| spliceosome-associated protein 49 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972916|gb|EDU40415.1| spliceosome-associated protein 49 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 329
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+GNL E+V R+L+++++ GRV ++ +P D+ + +GF FVE+ +EE Y
Sbjct: 12 NKEATVYVGNLHERVTPRILHELMLNTGRVRNVNMPVDRVNGQHQGFGFVEFHTEEEADY 71
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A K+ + V LY +R + DK
Sbjct: 72 APKIMNN-VALYGSRIRVNKASADK 95
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 84
N G ++IGNLD V+ER LYD Q G +V+ I RD+ T + KG+ F+ Y E
Sbjct: 98 NVEIGAELFIGNLDHGVDERTLYDTFGQFGPLVNAPKIARDEVTSESKGYGFISYGDFES 157
Query: 85 GHYAI 89
AI
Sbjct: 158 SDAAI 162
>gi|430811379|emb|CCJ31130.1| unnamed protein product [Pneumocystis jirovecii]
Length = 285
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+GNLDE+ + +L+++ +Q G VV++++P+D+ + +GF F E+ + E Y
Sbjct: 10 NQEATIYVGNLDERTTDAILWELFLQCGPVVNVHLPKDRVSQTHQGFGFCEFLTVEDADY 69
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A ++ + I LY + +R + DK
Sbjct: 70 ACRIMNQI-KLYGKPIRVNKASADK 93
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD VNE+VLYD G +V I RD + + K F F+ ++S E A
Sbjct: 100 GAELFVGNLDPLVNEKVLYDTFSVFGMLVAPPKIARD-DNGQSKCFGFISFDSFEAADAA 158
Query: 89 IK 90
I+
Sbjct: 159 IE 160
>gi|332208260|ref|XP_003253218.1| PREDICTED: RNA-binding protein 7 [Nomascus leucogenys]
Length = 267
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI LY R ++ SG +Q+ S++
Sbjct: 71 NGI-KLYGRPIKIQFRSGSSHASQDVSLS 98
>gi|355715837|gb|AES05418.1| RNA binding motif protein 7 [Mustela putorius furo]
Length = 262
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG VV + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVVKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI L+ R ++ SG +Q+ S++
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHASQDVSLS 98
>gi|400598668|gb|EJP66377.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 399
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
+Y+GN+DE+ ++Y+I++Q G + ++++PRD+ T +GF FVE+ + YA
Sbjct: 13 ATIYMGNIDERATPAMMYEIMLQMGPIHNIHMPRDRVTQSHQGFGFVEFRTPADAEYAAS 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ +G V L+ ++LR + D+
Sbjct: 73 VVNG-VKLFGKSLRVNKASADRQ 94
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD +E++LYD + G ++ L + RD + KGF FV + E A
Sbjct: 100 GAELFVGNLDPSADEKLLYDTFSRFGPLLSLPKVARD-DAGVSKGFGFVSFGDFESADAA 158
Query: 89 IKLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVP 135
++ SG L N+ T+++A K ++ L+ + + + VP
Sbjct: 159 VEHLSGQYLLSNQVTVQYAFKKDGKGDRHGDQAERELAKQAKKRNVVP 206
>gi|330934048|ref|XP_003304396.1| hypothetical protein PTT_16975 [Pyrenophora teres f. teres 0-1]
gi|311319032|gb|EFQ87532.1| hypothetical protein PTT_16975 [Pyrenophora teres f. teres 0-1]
Length = 328
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
N VY+GNL E+V R+L+++++ GRV ++ +P D+ + +GF FVE+ +EE
Sbjct: 11 QNKEATVYVGNLHERVTPRILHELMLNTGRVRNVNMPVDRVNGQHQGFGFVEFHTEEEAD 70
Query: 87 YAIKLFSGIVTLYNRTLRFALSGQDK 112
YA K+ + V LY +R + DK
Sbjct: 71 YAPKIMNN-VALYGSRIRVNKASADK 95
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 84
N G ++IGNLD V+ER LYD Q G +V+ I RD+ T + KG+ F+ Y E
Sbjct: 98 NVEIGAELFIGNLDHGVDERTLYDTFGQFGPLVNAPKIARDEVTSESKGYGFISYGDFES 157
Query: 85 GHYAI 89
AI
Sbjct: 158 SDAAI 162
>gi|336380658|gb|EGO21811.1| hypothetical protein SERLADRAFT_397224 [Serpula lacrymans var.
lacrymans S7.9]
Length = 183
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+GNLDE+ + +++++++QAG VV++++P+D+ + +G+ F E+ +EE Y
Sbjct: 9 NQEATVYLGNLDERCTDALVWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDAEY 68
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A K+ + I L+ + +R + DK
Sbjct: 69 ACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAG-RVVDLYIPRDKETDKPKG 73
S +K+Q+ + G N++IGNLDE V+ER+LYD G I RD T K KG
Sbjct: 88 ASSDKKQL-----DVGANLFIGNLDENVDERLLYDTFSAFGVMATTAKIARDPGTGKSKG 142
Query: 74 FAFVEYESEEIGHYAIKLFSG 94
+ F Y E A + +G
Sbjct: 143 YGFASYTDFESSDAATESMNG 163
>gi|322705004|gb|EFY96593.1| splicing factor 3b subunit 4 [Metarhizium anisopliae ARSEF 23]
Length = 383
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
+YIGN+DE+ +Y+I++Q G + ++++PRD+ T +GF FVE+ + YA
Sbjct: 13 ATIYIGNIDERATTATIYEIMLQMGPIHNIHMPRDRVTQNHQGFGFVEFRTPSDAEYAAN 72
Query: 91 LFSGIVTLYNRTLRFALSGQDKN 113
+ +GI L+ ++LR + DK
Sbjct: 73 VMNGI-KLFGKSLRVNKASADKQ 94
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIG 85
++ G ++IGNLD V+E++LYD + G ++ L + RD ++ KGF FV + E
Sbjct: 97 ADIGAELFIGNLDPMVDEKLLYDTFSRFGPLLSLPKVARD-DSGMSKGFGFVSFGDFESS 155
Query: 86 HYAIKLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVP 135
A+ G L ++++A K ++ L+ + + + VP
Sbjct: 156 DAAVANLDGQYMLSKEVSVQYAFKKDGKGERHGDEAERELAKQAKKRNIVP 206
>gi|167533335|ref|XP_001748347.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773159|gb|EDQ86802.1| predicted protein [Monosiga brevicollis MX1]
Length = 406
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+G LD+KV+E +++++ +QAG VV +++P+D+ + + + FVE+ E+ Y
Sbjct: 10 NQDATVYVGGLDDKVDEELVWELFLQAGPVVSVHMPKDRVSGAHQSYGFVEFLGEDDAEY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
A+K+ + ++ +Y + +R
Sbjct: 70 ALKILN-MINVYGKPIR 85
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK S + G N+YIGNL +V+E++L+D G ++ + RD ET KGFAF
Sbjct: 87 NKSASHSKHMEVGANLYIGNLAPEVDEKLLFDTFSAFGVILQHPKVMRDLETGHSKGFAF 146
Query: 77 VEYESEEIGHYAIK 90
+ Y + E AIK
Sbjct: 147 INYATFEASDAAIK 160
>gi|62859435|ref|NP_001016096.1| RNA binding motif protein 7 [Xenopus (Silurana) tropicalis]
gi|89269044|emb|CAJ83792.1| RNA binding motif protein 7 [Xenopus (Silurana) tropicalis]
gi|138519984|gb|AAI35724.1| RNA binding motif protein 7 [Xenopus (Silurana) tropicalis]
Length = 249
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 25 GNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEI 84
G + + +++GNLD + E +L+++ +QAG + + IP+DK+ KPK FAFV ++ EE
Sbjct: 2 GAAEADRTLFVGNLDPRATEELLFELFLQAGPAISVKIPKDKDG-KPKQFAFVNFKHEES 60
Query: 85 GHYAIKLFSGIVTLYNRTLR 104
Y + L +GI L+ R L+
Sbjct: 61 VPYGMSLLNGI-KLFGRPLK 79
>gi|62089092|dbj|BAD92990.1| Hypothetical protein FLJ11153 variant [Homo sapiens]
Length = 155
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 18 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKD-GKPKQFAFVNFKHEVSVPYAMNLL 76
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI LY R ++ SG Q+ S++
Sbjct: 77 NGI-KLYGRPIKIQFRSGSSHAPQDVSLS 104
>gi|169612257|ref|XP_001799546.1| hypothetical protein SNOG_09247 [Phaeosphaeria nodorum SN15]
gi|160702468|gb|EAT83439.2| hypothetical protein SNOG_09247 [Phaeosphaeria nodorum SN15]
Length = 306
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
N VY+GNL E+V+ R+L+++++ AGRV ++ +P D+ + +GF FVE+ +EE
Sbjct: 8 QNKEATVYVGNLHERVSPRILHELMLNAGRVRNVNMPVDRVNGQHQGFGFVEFHTEEEAD 67
Query: 87 YAIKLFSGIVTLYNRTLRFALSGQDK 112
YA K+ + ++ NR +R + DK
Sbjct: 68 YAPKVMNNVMLHGNR-IRVNKASADK 92
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 84
N G ++IGNLD+ V+E+ LYD Q G +++ + RD E++ KG+ F+ Y E
Sbjct: 95 NVEIGAELFIGNLDQMVDEKTLYDTFGQFGPLINAPKVARD-ESNMSKGYGFISYGDFES 153
Query: 85 GHYAIKLFSG 94
AI G
Sbjct: 154 SDAAIASMHG 163
>gi|426370523|ref|XP_004052212.1| PREDICTED: RNA-binding protein 7 isoform 1 [Gorilla gorilla
gorilla]
Length = 149
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKD-GKPKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI LY R ++ SG Q+ S++
Sbjct: 71 NGI-KLYGRPIKIQFRSGSSHAPQDVSLS 98
>gi|291383856|ref|XP_002708466.1| PREDICTED: RNA binding motif protein 7 [Oryctolagus cuniculus]
Length = 266
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI L+ R ++ SG +Q+ S++
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHASQDVSLS 98
>gi|351702313|gb|EHB05232.1| RNA-binding protein 7 [Heterocephalus glaber]
Length = 265
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 58/89 (65%), Gaps = 4/89 (4%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E+ YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFK-HEVSVYAMNLL 69
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI L+ R ++ SG +Q+ S++
Sbjct: 70 NGI-KLFGRPIKIQFRSGSSHASQDVSLS 97
>gi|395844114|ref|XP_003794810.1| PREDICTED: RNA-binding protein 7 [Otolemur garnettii]
Length = 264
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI L+ R ++ SG +Q+ S++
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHASQDVSLS 98
>gi|351701345|gb|EHB04264.1| Putative RNA-binding protein 11 [Heterocephalus glaber]
Length = 245
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 6/106 (5%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 93 SGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSDPV 134
+GI LY R + RF S + A S + ++S R++ V
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSSEPANQSFESCVKINSHSYRNEEV 115
>gi|363728611|ref|XP_416676.3| PREDICTED: putative RNA-binding protein 11 [Gallus gallus]
Length = 256
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 5/85 (5%)
Query: 23 MSGNSNSGC---NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY 79
MSG+ +G +++GNL+ +V E +LY++ +QAG + + I +DKE KPK F FV +
Sbjct: 1 MSGSGRAGEADRTLFVGNLESRVREEILYELFLQAGPLTKVTICKDKE-GKPKSFGFVCF 59
Query: 80 ESEEIGHYAIKLFSGIVTLYNRTLR 104
+ +E YAI L +GI LY R ++
Sbjct: 60 KHKESVPYAIALLNGI-RLYGRPIK 83
>gi|427776735|gb|JAA53819.1| Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase
[Rhipicephalus pulchellus]
Length = 306
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
VY+G L E+V+E+VL+ I G +VD+ IP D ET+K +GFAFVE+ES E AI
Sbjct: 9 VYVGGLAEEVDEKVLHAAFIPFGDLVDVQIPLDYETEKHRGFAFVEFESAEDAAAAIDNM 68
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R ++
Sbjct: 69 ND-SELFGRTIRVNIA 83
>gi|365758210|gb|EHN00063.1| Hsh49p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 213
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 64/115 (55%), Gaps = 7/115 (6%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
M+ +++S VY+GN+D ++ + LY++ IQ V+ + P+DK +G+AF+E+ ++
Sbjct: 1 MNFSTDSDSTVYVGNIDPRITKGQLYELFIQINPVLRIKYPKDKVLQTYQGYAFIEFYNK 60
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMP 137
E Y I++ + V LY+R ++ SS+ T LSS S+ +P+
Sbjct: 61 EDAEYVIQIMNNTVKLYDRLIKV-------RQVTSSVGTASLSSNNSKDIALPIA 108
>gi|114640401|ref|XP_001151010.1| PREDICTED: RNA-binding protein 7 isoform 1 [Pan troglodytes]
gi|397467681|ref|XP_003805538.1| PREDICTED: RNA-binding protein 7 [Pan paniscus]
gi|410213740|gb|JAA04089.1| RNA binding motif protein 7 [Pan troglodytes]
gi|410258170|gb|JAA17052.1| RNA binding motif protein 7 [Pan troglodytes]
gi|410291802|gb|JAA24501.1| RNA binding motif protein 7 [Pan troglodytes]
gi|410332447|gb|JAA35170.1| RNA binding motif protein 7 [Pan troglodytes]
Length = 267
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI LY R ++ SG Q+ S++
Sbjct: 71 NGI-KLYGRPIKIQFRSGSSHAPQDVSLS 98
>gi|9994185|ref|NP_057174.1| RNA-binding protein 7 [Homo sapiens]
gi|9978697|sp|Q9Y580.1|RBM7_HUMAN RecName: Full=RNA-binding protein 7; AltName: Full=RNA-binding
motif protein 7
gi|5070698|gb|AAD39257.1|AF156098_1 RNA binding motif protein 7 [Homo sapiens]
gi|21707920|gb|AAH34381.1| RNA binding motif protein 7 [Homo sapiens]
gi|119587651|gb|EAW67247.1| RNA binding motif protein 7, isoform CRA_b [Homo sapiens]
gi|189069167|dbj|BAG35505.1| unnamed protein product [Homo sapiens]
gi|208967360|dbj|BAG73694.1| RNA binding motif protein 7 [synthetic construct]
gi|312150136|gb|ADQ31580.1| RNA binding motif protein 7 [synthetic construct]
Length = 266
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI LY R ++ SG Q+ S++
Sbjct: 71 NGI-KLYGRPIKIQFRSGSSHAPQDVSLS 98
>gi|340725392|ref|XP_003401054.1| PREDICTED: hypothetical protein LOC100650788 [Bombus terrestris]
Length = 200
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++ GNL +KV E +LY++ +QAG V ++ IP+D+ K + F FV Y+ YA++LF
Sbjct: 8 LWCGNLSDKVTEEILYELFLQAGPVENVTIPKDR-NGKQRRFGFVTYKHVNSVSYALELF 66
Query: 93 SGIVTLYNRTLRFA 106
SG +L+NRTL +
Sbjct: 67 SG-TSLFNRTLNIS 79
>gi|170093944|ref|XP_001878193.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646647|gb|EDR10892.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 302
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
+ N VY+GNLDE+ + +++++++QAG VV++++P+D+ + +G+ F E +EE
Sbjct: 7 DRNQEATVYLGNLDERCTDALVWELMLQAGPVVNVHLPKDRISMAHQGYGFCELLTEEDA 66
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDK 112
YA K+ + I L+ + +R + DK
Sbjct: 67 EYACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAG-RVVDLYIPRDKETDKPKG 73
S +K+Q+ + G N++IGNLDE V+ER+LYD G I RD + KG
Sbjct: 88 ASSDKKQL-----DVGANLFIGNLDENVDERLLYDTFSAFGIMATTAKIARDTGSGTSKG 142
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ FV Y E A++ +G L N+ T+++A K ++ + L+++ ++
Sbjct: 143 YGFVSYTDFESSDAAVESMNGQF-LMNKAITVQYAFKKDGKGERHGTPAERLLAAQARKN 201
Query: 132 D 132
+
Sbjct: 202 N 202
>gi|119587652|gb|EAW67248.1| RNA binding motif protein 7, isoform CRA_c [Homo sapiens]
Length = 267
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI LY R ++ SG Q+ S++
Sbjct: 71 NGI-KLYGRPIKIQFRSGSSHAPQDVSLS 98
>gi|431838638|gb|ELK00569.1| Putative RNA-binding protein 11 [Pteropus alecto]
Length = 238
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 6/106 (5%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 93 SGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSDPV 134
+GI LY R + RF S + A S + ++S R++ V
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSSEPANQSFESCVKINSHSYRNEEV 115
>gi|410971965|ref|XP_003992431.1| PREDICTED: RNA-binding protein 7 [Felis catus]
Length = 266
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI L+ R ++ SG +Q+ S++
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHASQDVSVS 98
>gi|294925596|ref|XP_002778960.1| spliceosome-associated protein, putative [Perkinsus marinus ATCC
50983]
gi|239887806|gb|EER10755.1| spliceosome-associated protein, putative [Perkinsus marinus ATCC
50983]
Length = 388
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+GNLD KV+E +L+++ IQ G + ++ +PRD+ +G+ FVE+++ + Y
Sbjct: 19 NPDATIYVGNLDTKVDEELLWELFIQCGPIQNVSLPRDRIIGSHQGYGFVEFKNPDDADY 78
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A+K+ + + L+++ +R S D+
Sbjct: 79 AVKIMN-LTKLFSKPIRCNKSSSDR 102
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G N++IGNL V+E+ LYD G +V ET + KGF FV Y+ E A+
Sbjct: 109 GANLFIGNLGPDVDEKQLYDTFSAFGSIVVFCKIMRSETGESKGFGFVSYDGFEASDAAM 168
Query: 90 KLFSGIVTLYNRTLRFALS 108
+G L NR + + S
Sbjct: 169 AGMNG-QYLCNRQISVSYS 186
>gi|7023641|dbj|BAA92036.1| unnamed protein product [Homo sapiens]
Length = 267
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI LY R ++ SG Q+ S++
Sbjct: 71 NGI-KLYGRPIKIQFRSGSSHAPQDVSLS 98
>gi|431908299|gb|ELK11897.1| RNA-binding protein 7 [Pteropus alecto]
Length = 264
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI L+ R ++ SG +Q+ S++
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHASQDVSLS 98
>gi|345326044|ref|XP_003430992.1| PREDICTED: putative RNA-binding protein 11-like [Ornithorhynchus
anatinus]
Length = 240
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG ++ + I +DKE KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLESRVREEILYELFLQAGPLIKVTICKDKE-GKPKSFGFVCFKHTESVSYAIALL 70
Query: 93 SGIVTLYNRTL 103
+GI LY R +
Sbjct: 71 NGI-RLYGRPI 80
>gi|47682782|gb|AAH70262.1| RNA binding motif protein 7 [Homo sapiens]
Length = 266
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI LY R ++ SG Q+ S++
Sbjct: 71 NGI-RLYGRPIKIQFRSGSSHAPQDVSLS 98
>gi|6324895|ref|NP_014964.1| Hsh49p [Saccharomyces cerevisiae S288c]
gi|2500588|sp|Q99181.1|HSH49_YEAST RecName: Full=Protein HSH49
gi|940850|emb|CAA62174.1| orf 06142 [Saccharomyces cerevisiae]
gi|1420700|emb|CAA99639.1| HSH49 [Saccharomyces cerevisiae]
gi|45270764|gb|AAS56763.1| YOR319W [Saccharomyces cerevisiae]
gi|151945399|gb|EDN63642.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190407618|gb|EDV10885.1| protein HSH49 [Saccharomyces cerevisiae RM11-1a]
gi|207340889|gb|EDZ69099.1| YOR319Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272549|gb|EEU07528.1| Hsh49p [Saccharomyces cerevisiae JAY291]
gi|259149795|emb|CAY86599.1| Hsh49p [Saccharomyces cerevisiae EC1118]
gi|285815190|tpg|DAA11083.1| TPA: Hsh49p [Saccharomyces cerevisiae S288c]
gi|323303013|gb|EGA56817.1| Hsh49p [Saccharomyces cerevisiae FostersB]
gi|323307266|gb|EGA60547.1| Hsh49p [Saccharomyces cerevisiae FostersO]
gi|323331441|gb|EGA72857.1| Hsh49p [Saccharomyces cerevisiae AWRI796]
gi|323335366|gb|EGA76653.1| Hsh49p [Saccharomyces cerevisiae Vin13]
gi|323346364|gb|EGA80653.1| Hsh49p [Saccharomyces cerevisiae Lalvin QA23]
gi|365762976|gb|EHN04508.1| Hsh49p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296647|gb|EIW07749.1| Hsh49p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 213
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 66/115 (57%), Gaps = 7/115 (6%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
M+ +++SG VY+GN+D ++ + LY++ IQ V+ + P+DK +G+AF+E+ ++
Sbjct: 1 MNYSADSGNTVYVGNIDPRITKEQLYELFIQINPVLRIKYPKDKVLQAYQGYAFIEFYNQ 60
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMP 137
YAIK+ + V LY+R ++ + NS+ TT L S S+ +P+
Sbjct: 61 GDAQYAIKIMNNTVRLYDRLIKV------RQVTNST-GTTNLPSNISKDMILPIA 108
>gi|349581469|dbj|GAA26627.1| K7_Hsh49p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 213
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 66/115 (57%), Gaps = 7/115 (6%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
M+ +++SG VY+GN+D ++ + LY++ IQ V+ + P+DK +G+AF+E+ ++
Sbjct: 1 MNYSADSGNTVYVGNIDPRITKEQLYELFIQINPVLRIKYPKDKVLQAYQGYAFIEFYNQ 60
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMP 137
YAIK+ + V LY+R ++ + NS+ TT L S S+ +P+
Sbjct: 61 GDAQYAIKIMNNTVRLYDRLIKV------RQVTNST-GTTNLPSNISKDMILPIA 108
>gi|148225206|ref|NP_001080815.1| RNA binding motif protein 7 [Xenopus laevis]
gi|32766620|gb|AAH54991.1| Rbm7-prov protein [Xenopus laevis]
Length = 251
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Query: 25 GNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEI 84
G + + +++GNLD + E +L+++ +QAG + IP+DK+ KPK FAFV ++ EE
Sbjct: 2 GAAEADRALFVGNLDPRATEELLFELFLQAGPAFSVKIPKDKDG-KPKQFAFVNFKHEES 60
Query: 85 GHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEIS 144
Y + L +GI L+ R L+ K+ Q + + P NG
Sbjct: 61 VPYGMSLLNGI-KLFGRPLKIQYRSGSKHIQQDGNNSPHSTHFNGNGSPTGSSPNGSRYD 119
Query: 145 HHSMRISVPRH 155
+ + P H
Sbjct: 120 RNGDHLKSPGH 130
>gi|367003291|ref|XP_003686379.1| hypothetical protein TPHA_0G01080 [Tetrapisispora phaffii CBS 4417]
gi|357524680|emb|CCE63945.1| hypothetical protein TPHA_0G01080 [Tetrapisispora phaffii CBS 4417]
Length = 220
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
NS VY+GN+D +V +LY++ +Q + + P+DK +G+AF+++ +E+ Y
Sbjct: 9 NSNKTVYVGNIDPQVTLDILYELFVQVAPISSIKYPKDKVLQAYQGYAFIDFFTEDDVQY 68
Query: 88 AIKLFSGIVTLYNRTLR-----FALSGQDKNAQNSSMTT 121
IK+ + V LY + L+ +ALS NA N + T
Sbjct: 69 VIKVMNNTVRLYGKLLKVRLSNYALSASTANASNKTETA 107
>gi|326913169|ref|XP_003202913.1| PREDICTED: putative RNA-binding protein 11-like [Meleagris
gallopavo]
Length = 221
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 23 MSGNSNSGC---NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY 79
MSG +G +++GNL+ +V E +LY++ +QAG + + I +DKE KPK F FV +
Sbjct: 1 MSGPGRAGEADRTLFVGNLESRVREEILYELFLQAGPLTKVTICKDKE-GKPKSFGFVCF 59
Query: 80 ESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPL 124
+ +E YAI L +GI LY R ++ Q+ N TP
Sbjct: 60 KHKESVPYAIALLNGI-RLYGRPIKVRYRYQEPYG-NPPFPVTPF 102
>gi|311263944|ref|XP_003129925.1| PREDICTED: RNA-binding protein 7-like [Sus scrofa]
Length = 265
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI L+ R ++ SG +Q S++
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHASQEVSLS 98
>gi|358057302|dbj|GAA96651.1| hypothetical protein E5Q_03322 [Mixia osmundae IAM 14324]
Length = 274
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y+GNLDE+V + +++++++Q G + ++++P+D+ + +G+ F E+++EE Y
Sbjct: 11 NQEATIYMGNLDERVTDALVWELMLQCGPIGNVHLPKDRVSMAHQGYGFCEFQNEEDAEY 70
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A+K+ + I L+ + +R + D+
Sbjct: 71 AVKIMNQI-KLFGKPIRVNKASSDR 94
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD V+ER+LYD G + + YIPR+ T +G F+ +++ E A
Sbjct: 100 GANLFIGNLDPAVDERLLYDAFSNFGTMTNTAYIPRETGTGASRGHGFISFDTFEASDAA 159
Query: 89 IKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
I+ + L N+ T+++A K ++ S L+++ ++
Sbjct: 160 IEAMNNQY-LMNKPITVQYAFKKDTKGERHGSAAERLLAAQAQKN 203
>gi|453084590|gb|EMF12634.1| RRM_1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 344
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 73/148 (49%), Gaps = 14/148 (9%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
M+ G V+IGN+ V+E + DI +AG+VV+ + DKET +PKGF F+EY
Sbjct: 1 MAQREKGGRVVFIGNIPYGVSEEQIMDIFGRAGQVVNFRLVYDKETGQPKGFGFLEYTDT 60
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGME 142
+ A++ + L RTLR S +++A S T P S ++ P P
Sbjct: 61 DAAASAVRNLNE-SDLNGRTLRVDYSNDNRSAGGSGNQTQPPESNRA---PPP------- 109
Query: 143 ISHHSMR-ISVPRHYSSEEPP-PPGVTL 168
+H +M + PR S PP PPG L
Sbjct: 110 -AHFNMNGQAPPRPDPSALPPLPPGTEL 136
>gi|399218847|emb|CCF75734.1| unnamed protein product [Babesia microti strain RI]
Length = 237
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 36 GNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLFSGI 95
GNLD +V+E +L+++ Q G V +++IPRDK T++ +G+ FVE+++E YA K+ + +
Sbjct: 30 GNLDPQVDEEILWELFTQVGIVRNVHIPRDKVTNQHQGYGFVEFDNETEADYAQKVMNAL 89
Query: 96 VTLYNRTLRFALSGQDK 112
+Y++ +R + QDK
Sbjct: 90 -KVYHKPIRCNKASQDK 105
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G N++IGNLD V+E++LYD G V+ I R++ET KGF FV ++S + A+
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGLVLSTKIVREEETGLGKGFGFVSFDSFDSSDAAL 170
Query: 90 KLFSG 94
+G
Sbjct: 171 ASMNG 175
>gi|307175661|gb|EFN65554.1| RNA-binding protein 7 [Camponotus floridanus]
Length = 232
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y GNL +K+ E +LY++ +Q G + + IP+D++ K + FAF+ Y+ YA++LF
Sbjct: 8 LYCGNLSDKITEDILYELFLQGGPIQKISIPKDRDG-KQRPFAFITYKHIHSVEYALRLF 66
Query: 93 SGIVTLYNRTLRFAL 107
G LYNRTL L
Sbjct: 67 DG-TELYNRTLNMQL 80
>gi|156836482|ref|XP_001642301.1| hypothetical protein Kpol_224p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156112796|gb|EDO14443.1| hypothetical protein Kpol_224p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 217
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 4/121 (3%)
Query: 24 SGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
SG N +VY+GN+D + + +LY++ +Q + + P+DK +G+AF+++ +EE
Sbjct: 6 SGFKNPDLSVYVGNIDPSITKELLYELFVQISPIAKINYPKDKVLQTHQGYAFIDFYTEE 65
Query: 84 IGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEI 143
+YAI+ F+ V L NR L+ + N SS ++T LS S + + V ++
Sbjct: 66 DANYAIQAFNNNVQLNNRVLKV----RKTNNNISSKSSTNLSQATSVTPYAKIFVKNLDS 121
Query: 144 S 144
S
Sbjct: 122 S 122
>gi|194758661|ref|XP_001961580.1| GF14865 [Drosophila ananassae]
gi|190615277|gb|EDV30801.1| GF14865 [Drosophila ananassae]
Length = 241
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 2 VPSPKHSF--VPNDVVSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVD 59
+P+P + F PND + + + ++ GNLDE+V E +LY++ +QAG +
Sbjct: 34 MPNPFNPFGSTPNDSFEQAGEDLDDEDDEDQRTLFCGNLDERVTEEILYEVFLQAGPIEQ 93
Query: 60 LYIPRDKETDKPKGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSS 118
+ IP DK + + F FV Y+ +A++L+ G+ L+ + + G DK Q S
Sbjct: 94 VRIPVDKMGGRHRNFGFVTYQHLCAVPFALELYQGL-ELFEKKVTIRPQGADKPRQQQS 151
>gi|149716524|ref|XP_001502226.1| PREDICTED: RNA-binding protein 7-like [Equus caballus]
Length = 266
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+D++ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDRDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI L+ R ++ SG +Q+ S++
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHASQDVSLS 98
>gi|114683624|ref|XP_531391.2| PREDICTED: splicing regulator RBM11 [Pan troglodytes]
Length = 281
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 93 SGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSD 132
+GI LY R + RF S + A S + ++S R++
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSSEPANQSFESCVKINSHNYRNE 113
>gi|345478874|ref|XP_001607670.2| PREDICTED: hypothetical protein LOC100123901 [Nasonia vitripennis]
Length = 214
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++ GNL E++ E +LY++ +QAG + + IP++++ KPK F FV Y++ YA++LF
Sbjct: 9 IWCGNLSEQITEDILYELFLQAGPIQKVSIPKERDG-KPKSFGFVTYKNLCSVPYALELF 67
Query: 93 SGIVTLYNRTL 103
G V L+NR+L
Sbjct: 68 DGTV-LFNRSL 77
>gi|327288080|ref|XP_003228756.1| PREDICTED: RNA-binding protein 7-like [Anolis carolinensis]
Length = 261
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNLD V E +L+++ +Q G V+++ IP+D+E K K FAFV ++ EE Y + L
Sbjct: 12 LFVGNLDPGVTEELLFELFLQGGPVLNVKIPKDRE-GKAKSFAFVNFKHEESVPYGMSLL 70
Query: 93 SGIVTLYNRTLRFAL 107
+GI L+ R L+
Sbjct: 71 NGI-KLFGRPLKIQF 84
>gi|241149709|ref|XP_002406178.1| cyclophilin type peptidyl-prolyl cis-trans isomerase, putative
[Ixodes scapularis]
gi|215493819|gb|EEC03460.1| cyclophilin type peptidyl-prolyl cis-trans isomerase, putative
[Ixodes scapularis]
Length = 292
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
VY+G L E+V+E+VL+ I G VVD+ IP D ET+K +GFAFVE+E E AI
Sbjct: 9 VYVGGLAEEVDEKVLHAAFIPFGDVVDVQIPLDYETEKHRGFAFVEFEQAEDAVAAIDNM 68
Query: 93 SGIVTLYNRTLR 104
+ L+ RT+R
Sbjct: 69 ND-SELFGRTIR 79
>gi|397496846|ref|XP_003819236.1| PREDICTED: putative RNA-binding protein 11 [Pan paniscus]
Length = 281
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 93 SGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSD 132
+GI LY R + RF S + A S + ++S R++
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSSEPANQSFESCVKINSHNYRNE 113
>gi|301757276|ref|XP_002914487.1| PREDICTED: putative RNA-binding protein 11-like [Ailuropoda
melanoleuca]
gi|281347610|gb|EFB23194.1| hypothetical protein PANDA_002377 [Ailuropoda melanoleuca]
Length = 238
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 6/106 (5%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKTFGFVCFKHPESVSYAIALL 70
Query: 93 SGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSDPV 134
+GI LY R + RF S + A S + ++S R++ V
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSSEPANQSFESCVKINSHSYRNEEV 115
>gi|26333183|dbj|BAC30309.1| unnamed protein product [Mus musculus]
gi|148665853|gb|EDK98269.1| RNA binding motif protein 11, isoform CRA_b [Mus musculus]
Length = 237
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + + +D++ KPK F FV ++ E YAI L
Sbjct: 11 VFVGNLEARVREEILYELFLQAGPLTKVTLCKDRD-GKPKSFGFVCFKHPESVSYAIALL 69
Query: 93 SGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSD 132
+GI LY R + RF S + A S + ++S R+D
Sbjct: 70 NGI-RLYGRPINVQYRFGSSRSSEPANQSFESCAKINSHSFRND 112
>gi|39930581|ref|NP_938044.1| splicing regulator RBM11 [Mus musculus]
gi|81912952|sp|Q80YT9.1|RBM11_MOUSE RecName: Full=Splicing regulator RBM11; AltName: Full=RNA-binding
motif protein 11
gi|29747748|gb|AAH50779.1| Rbm11 protein [Mus musculus]
Length = 238
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + + +D++ KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTLCKDRD-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 93 SGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSD 132
+GI LY R + RF S + A S + ++S R+D
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSSEPANQSFESCAKINSHSFRND 113
>gi|307208549|gb|EFN85888.1| Splicing factor 3B subunit 4 [Harpegnathos saltator]
Length = 429
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 53/88 (60%), Gaps = 12/88 (13%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAG-----------RVVDLYIPRDKETDKPKGFAF 76
N +Y+G LD+KV E +++++ +Q+G V+++++P+D+ T +G+ F
Sbjct: 10 NQDATIYVGGLDDKVTESLMWELFVQSGPVGMYIYISFMHVLNVHMPKDRVTQMHQGYGF 69
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNRTLR 104
VE+ EE YAIK+ + ++ LY + +R
Sbjct: 70 VEFMGEEDADYAIKIMN-MIKLYGKPIR 96
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET KGFAF
Sbjct: 98 NKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAF 157
Query: 77 VEYESEEIGHYAIKLFSG 94
+ + S + +I+ +G
Sbjct: 158 INFASFDASDASIEAMNG 175
>gi|169234630|ref|NP_658983.3| splicing regulator RBM11 [Homo sapiens]
gi|9978670|sp|P57052.1|RBM11_HUMAN RecName: Full=Splicing regulator RBM11; AltName: Full=RNA-binding
motif protein 11
gi|7768750|dbj|BAA95545.1| RBM11 [Homo sapiens]
gi|119630467|gb|EAX10062.1| RNA binding motif protein 11, isoform CRA_c [Homo sapiens]
Length = 281
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 93 SGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSD 132
+GI LY R + RF S + A S + ++S R++
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSSEPANQSFESCVKINSHNYRNE 113
>gi|402862668|ref|XP_003895669.1| PREDICTED: putative RNA-binding protein 11 [Papio anubis]
Length = 281
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 93 SGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSD 132
+GI LY R + RF S + A S + ++S R++
Sbjct: 71 NGI-RLYGRPINVQYRFGSSHSSEPANQSFESCVKINSYSYRNE 113
>gi|342320413|gb|EGU12353.1| Splicing factor 3b subunit 4 [Rhodotorula glutinis ATCC 204091]
Length = 317
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N Y+GNLDE+V + +++++++QAG V ++++P+D+ + +G+ F E+ +EE Y
Sbjct: 10 NQDATCYLGNLDERVTDALVWELMLQAGPVANVHLPKDRISMTHQGYGFCEFLTEEDAEY 69
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A K+ + I L+ + +R + D+
Sbjct: 70 ACKIMNQI-KLFGKPIRVNKASSDR 93
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD ++ER+LYD G +V I RD T KGF FV Y+S E A
Sbjct: 99 GANLFIGNLDPNIDERMLYDTFTAFGTLVQPAKISRDVGTGASKGFGFVSYDSFEAADAA 158
Query: 89 IKLFSG 94
I+ +G
Sbjct: 159 IESMNG 164
>gi|426392612|ref|XP_004062641.1| PREDICTED: splicing regulator RBM11 [Gorilla gorilla gorilla]
Length = 239
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 93 SGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSD 132
+GI LY R + RF S + A S + ++S R++
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSSEPANQSFESCVKINSHNYRNE 113
>gi|355747455|gb|EHH51952.1| RNA-binding motif protein 11 [Macaca fascicularis]
Length = 281
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 93 SGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSD 132
+GI LY R + RF S + A S + ++S R++
Sbjct: 71 NGI-RLYGRPINVQYRFGSSHSSEPANQSFESCVKINSYSYRNE 113
>gi|223995445|ref|XP_002287396.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976512|gb|EED94839.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 305
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N Y+GNLD V E +L ++ Q GRV +++P+DK T G+ FVE+ Y
Sbjct: 2 NQEATCYVGNLDPSVTEDILVELFTQIGRVSSVHMPKDKITGLHSGYGFVEFLDVTDADY 61
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQNSSM 119
AI++ S +V L++R LR S DK S+
Sbjct: 62 AIQIMS-MVKLFSRPLRVNKSSLDKKTGVGSL 92
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 25 GNSNSGCNVYIGNLD-EKVNERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESE 82
G+ + G N++IGNLD V+E++LYD G ++ I RD T++ KGF FV +++
Sbjct: 90 GSLDVGANLFIGNLDPADVDEKLLYDTFSAFGTIIRPPKIMRDDMTNQSKGFGFVSFDAF 149
Query: 83 EIGHYAIK 90
E AI+
Sbjct: 150 EASDLAIE 157
>gi|189242406|ref|XP_001810193.1| PREDICTED: similar to putative peptidyl-prolyl cis-trans isomerase
E [Tribolium castaneum]
gi|270016278|gb|EFA12724.1| hypothetical protein TcasGA2_TC002359 [Tribolium castaneum]
Length = 302
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL I G +VD+ IP D ET+K +GFAF+E+ES E AI
Sbjct: 9 IYVGGLAEEVDDKVLNAAFIPFGDIVDIQIPLDYETEKHRGFAFIEFESAEDAAAAIDNM 68
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 69 ND-SELFGRTIRVNLA 83
>gi|426217269|ref|XP_004002876.1| PREDICTED: splicing regulator RBM11 [Ovis aries]
Length = 246
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 12/123 (9%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 93 SGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISHHSM 148
+GI LY R + RF S + A S + ++S R++ M S SM
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSCEPANQSFESCVKINSHSYRNE------EAMGRSSFSM 123
Query: 149 RIS 151
+ S
Sbjct: 124 QFS 126
>gi|109065778|ref|XP_001083260.1| PREDICTED: putative RNA-binding protein 11 [Macaca mulatta]
gi|355560395|gb|EHH17081.1| RNA-binding motif protein 11 [Macaca mulatta]
Length = 281
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 93 SGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSD 132
+GI LY R + RF S + A S + ++S R++
Sbjct: 71 NGI-RLYGRPINVQYRFGSSHSSEPANQSFESCVKINSYSYRNE 113
>gi|291400883|ref|XP_002716809.1| PREDICTED: RNA binding motif protein 7-like [Oryctolagus cuniculus]
Length = 238
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 15/129 (11%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 93 SGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSDPV------PM---PVN 139
+GI LY R + RF S + A S ++S R++ + PM P+N
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSSEPANQSFENCVKINSHSYRNEEMMGRSSFPMQFFPIN 129
Query: 140 GMEISHHSM 148
+ S
Sbjct: 130 NAAVPQESF 138
>gi|149059695|gb|EDM10578.1| RNA binding motif protein 11 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 176
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
V++GNL+ +V E +LY++ +QAG + + + +D++ KPK F FV ++ E YAI L
Sbjct: 11 TVFVGNLEARVREEILYELFLQAGPLTKVTLCKDRD-GKPKSFGFVCFKHPESVSYAIAL 69
Query: 92 FSGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSD 132
+GI LY R + RF S + A S + ++S R+D
Sbjct: 70 LNGI-RLYGRPINVQYRFGSSRSSEPANQSFESCAKINSHSFRND 113
>gi|332229296|ref|XP_003263827.1| PREDICTED: splicing regulator RBM11 [Nomascus leucogenys]
Length = 281
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 93 SGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSD 132
+GI LY R + RF S + A S + ++S R +
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSSEPANQSFESCVKINSHHYRDE 113
>gi|358410117|ref|XP_003581718.1| PREDICTED: putative RNA-binding protein 11-like [Bos taurus]
gi|296491598|tpg|DAA33639.1| TPA: RNA binding motif protein 11 [Bos taurus]
Length = 246
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 12/123 (9%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 93 SGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISHHSM 148
+GI LY R + RF S + A S + ++S R++ M S SM
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSCEPANQSFESCVKINSHSYRNE------EAMGRSSFSM 123
Query: 149 RIS 151
+ S
Sbjct: 124 QFS 126
>gi|77735925|ref|NP_001029659.1| RNA-binding protein 7 [Bos taurus]
gi|91207337|sp|Q3MHY8.1|RBM7_BOVIN RecName: Full=RNA-binding protein 7; AltName: Full=RNA-binding
motif protein 7
gi|75775082|gb|AAI04519.1| RNA binding motif protein 7 [Bos taurus]
gi|296480264|tpg|DAA22379.1| TPA: RNA-binding protein 7 [Bos taurus]
gi|440909197|gb|ELR59131.1| RNA-binding protein 7 [Bos grunniens mutus]
Length = 262
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI L+ R ++ +G +Q S++
Sbjct: 71 NGI-KLFGRPIKIQFRAGSSHASQEVSLS 98
>gi|440893645|gb|ELR46339.1| Putative RNA-binding protein 11 [Bos grunniens mutus]
Length = 246
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 12/123 (9%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 93 SGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISHHSM 148
+GI LY R + RF S + A S + ++S R++ M S SM
Sbjct: 71 NGI-RLYGRPINVQYRFGSSHSCEPANQSFESCVKINSHSYRNE------EAMGRSSFSM 123
Query: 149 RIS 151
+ S
Sbjct: 124 QFS 126
>gi|401839791|gb|EJT42839.1| HSH49-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 213
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 7/115 (6%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
M+ +++S VY+GN+D ++ + LY++ IQ V+ + P+DK +G+AF+E+ ++
Sbjct: 1 MNFSTDSDSTVYVGNIDPRITKDQLYELFIQINPVLRIKYPKDKVLQTYQGYAFIEFYNK 60
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMP 137
E Y I++ + V LY+R ++ +S+ T LSS S+ +P+
Sbjct: 61 EDAEYVIQIMNNTVKLYDRLIKV-------RQVTNSVGTANLSSNNSKDIALPIA 108
>gi|395821254|ref|XP_003783961.1| PREDICTED: putative RNA-binding protein 11 [Otolemur garnettii]
Length = 237
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 12/116 (10%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E Y+I L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHAESVSYSIALL 70
Query: 93 SGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSDPV------PMPV 138
+GI LY R + RF S + A S + ++S R++ + PMP
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSSEPATQSFESCVKINSHSYRNEEMVGRSSFPMPF 125
>gi|344276876|ref|XP_003410231.1| PREDICTED: putative RNA-binding protein 11-like [Loxodonta
africana]
Length = 238
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 6/106 (5%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 93 SGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSDPV 134
+GI LY R + RF S + A S + +++ R++ V
Sbjct: 71 NGI-RLYGRPINVQYRFGSSHSCEPANQSFESCVKINTHSYRNEEV 115
>gi|94966923|ref|NP_001035657.1| putative RNA-binding protein 11 [Bos taurus]
gi|74267635|gb|AAI02761.1| RNA binding motif protein 11 [Bos taurus]
Length = 246
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 12/123 (9%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 93 SGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISHHSM 148
+GI LY R + RF S + A S + ++S R++ M S SM
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSCEPANQSFESCVKINSHSYRNE------EAMGRSSFSM 123
Query: 149 RIS 151
+ S
Sbjct: 124 QFS 126
>gi|345799921|ref|XP_853905.2| PREDICTED: RNA-binding protein 7 [Canis lupus familiaris]
Length = 262
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG VV + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVVKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSM 119
+GI L+ R ++ SG +Q+ ++
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHASQDVNL 97
>gi|149041583|gb|EDL95424.1| RNA binding motif protein 7 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 265
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ K K FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KLKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI L+ R ++ SG +Q++SM+
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHLSQDASMS 98
>gi|242012725|ref|XP_002427078.1| peptidyl-prolyl cis-trans isomerase E, putative [Pediculus humanus
corporis]
gi|212511336|gb|EEB14340.1| peptidyl-prolyl cis-trans isomerase E, putative [Pediculus humanus
corporis]
Length = 158
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
+N +Y G L E+V+E VL I G ++D+ IP D ET+K +GFAF+E+ES E
Sbjct: 3 TNQKRTIYAGGLAEEVDENVLNAAFIPFGDIIDIQIPLDYETEKHRGFAFIEFESAEDAA 62
Query: 87 YAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKS 129
AI + L+ RT+R L+ K + S T P+ S S
Sbjct: 63 AAIDNMND-SELFGRTIRVNLAKPQKIKEGS---TKPVWSEDS 101
>gi|452823773|gb|EME30781.1| mRNA splicing factor, putative isoform 1 [Galdieria sulphuraria]
Length = 291
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GN+ +E L +IL Q G ++ + D+ET KPKG+AF EY E+ AI+
Sbjct: 7 VFVGNIAYNTSEEQLQEILSQIGPILSFRVVYDRETGKPKGYAFCEYPDAEMALSAIRNL 66
Query: 93 SGIVTLYNRTLRFALSGQDK 112
+G L RTLR L+ DK
Sbjct: 67 NG-TELNGRTLRVDLADSDK 85
>gi|322779383|gb|EFZ09622.1| hypothetical protein SINV_09004 [Solenopsis invicta]
Length = 234
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y GNL EKV E +LY++ +Q G V + IP+D+E K + + F+ Y+ + YA+ LF
Sbjct: 8 LYCGNLSEKVTEDILYELFLQGGPVQKITIPKDREG-KQRTYGFITYKHMKSVEYALLLF 66
Query: 93 SGIVTLYNRTL 103
G + LYNRTL
Sbjct: 67 DGTM-LYNRTL 76
>gi|340723814|ref|XP_003400283.1| PREDICTED: splicing factor 3B subunit 4-like [Bombus terrestris]
Length = 413
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N G ++ +KV E +++++ +Q+G VV++++P+D+ T +G+ FVE+ EE Y
Sbjct: 10 NQGTCLFXXXXXDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADY 69
Query: 88 AIKLFSGIVTLYNRTLR 104
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET KGFAF
Sbjct: 87 NKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAF 146
Query: 77 VEYESEEIGHYAIKLFSG 94
+ + S + +I+ +G
Sbjct: 147 INFASFDASDASIEAMNG 164
>gi|346467825|gb|AEO33757.1| hypothetical protein [Amblyomma maculatum]
Length = 306
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
VY+G L E+V+E+VL+ I G +VD+ IP D ET K +GFAFVE+E E AI
Sbjct: 9 VYVGGLAEEVDEKVLHAAFIPFGDLVDVQIPLDYETQKHRGFAFVEFEQAEDAAAAIDNM 68
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R ++
Sbjct: 69 ND-SELFGRTIRVNIA 83
>gi|57108733|ref|XP_535558.1| PREDICTED: putative RNA-binding protein 11 [Canis lupus familiaris]
Length = 238
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 6/106 (5%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKTFGFVCFKHPESVSYAIALL 70
Query: 93 SGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSDPV 134
+GI LY R + RF S + A S ++S R++ V
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSSEPANQSFENCIKINSHSYRNEEV 115
>gi|307105970|gb|EFN54217.1| hypothetical protein CHLNCDRAFT_24873 [Chlorella variabilis]
Length = 104
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 6/98 (6%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQ-AGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
+++GNLD +V R+LY++ IQ AG V+ + +P + +G+ FVE+ES E +A+
Sbjct: 7 TTLWLGNLDPRVTRRLLYELGIQQAGPVISISLPVAVDGSN-RGYGFVEFESVESAAFAV 65
Query: 90 KLFSGIVTLYNRTLRFALSGQDKNA---QNSSMTTTPL 124
+LF G+ TL+ R +R G+ Q+ M P+
Sbjct: 66 RLFRGL-TLFGRPVRTDFGGKKAGGPQQQHGGMAAAPV 102
>gi|221115228|ref|XP_002154334.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Hydra
magnipapillata]
Length = 297
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+YIG L E+V E++L+ I G ++D+ IP D ET K +GFAF+E+E E AI
Sbjct: 7 IYIGGLAEEVEEKILHAAFIPFGDIIDVNIPIDYETSKHRGFAFMEFELAEDAAAAIDNM 66
Query: 93 SGIVTLYNRTLRFALSGQDKNAQNSS 118
+ LY RT+R L+ KN +++S
Sbjct: 67 NE-SELYGRTIRVNLAKPMKNPESAS 91
>gi|312377547|gb|EFR24356.1| hypothetical protein AND_11102 [Anopheles darlingi]
Length = 293
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++ GNL EKV + +LY++ +QAG V ++ IPRD + + + +AF+ Y YAIKLF
Sbjct: 8 LWCGNLSEKVTDELLYELFLQAGPVENVKIPRDSDR-RQRSYAFITYVHACSVEYAIKLF 66
Query: 93 SGIVTLYNRTL 103
G +LY R L
Sbjct: 67 EG-TSLYQRKL 76
>gi|367009880|ref|XP_003679441.1| hypothetical protein TDEL_0B01010 [Torulaspora delbrueckii]
gi|359747099|emb|CCE90230.1| hypothetical protein TDEL_0B01010 [Torulaspora delbrueckii]
Length = 210
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
+N VY+GN+D KV + LY++ +Q + ++ P+DK +GFAFVE+ + E
Sbjct: 6 NNPETTVYVGNIDPKVTKENLYELFVQVSPIANIRYPKDKVLQLHQGFAFVEFYTPEDCQ 65
Query: 87 YAIKLFSGIVTLYNRTLR 104
Y ++L + V LY+R L+
Sbjct: 66 YVVQLLNNTVQLYDRFLK 83
>gi|367038731|ref|XP_003649746.1| hypothetical protein THITE_2108627 [Thielavia terrestris NRRL 8126]
gi|346997007|gb|AEO63410.1| hypothetical protein THITE_2108627 [Thielavia terrestris NRRL 8126]
Length = 399
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+GN+DE+ + +L +++ Q G V +++P+D+ + +G+ FVE+++ Y
Sbjct: 8 NKDATVYVGNIDERFTQELLSELMTQVGPVRQVHMPQDRVSQTHQGYGFVEFDTPASAEY 67
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKN 113
A K+ +GI ++ + +R + DK
Sbjct: 68 AAKVLNGI-RIWGKPIRVNKASADKQ 92
Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G ++I NLD +V+E++LYD Q G+++ I RD E KG+ FV ++S E A
Sbjct: 98 GAELFINNLDPQVDEKILYDTFSQFGQILRQPNIVRD-ENHISKGYGFVSFDSFEASDAA 156
Query: 89 IKLFSG 94
+ +G
Sbjct: 157 LSTMNG 162
>gi|161899049|ref|XP_001712751.1| mRNA splicing factor 3b4 [Bigelowiella natans]
gi|75756244|gb|ABA27139.1| mRNA splicing factor 3b4 [Bigelowiella natans]
Length = 208
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 37 NLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLFSGIV 96
NLD KVNE +L+++ +Q G + +++PRD +D+ G+AF+EYE+E +Y IK+ S +
Sbjct: 25 NLDLKVNEEILWELFLQTGPLRSIFLPRDPLSDRHFGYAFIEYETELDANYTIKILSPL- 83
Query: 97 TLYNRTL 103
L+N+ +
Sbjct: 84 RLFNKLI 90
>gi|395535971|ref|XP_003769994.1| PREDICTED: splicing factor 3B subunit 4 [Sarcophilus harrisii]
Length = 462
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 40 EKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLFSGIVTLY 99
+KV+E +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE YAIK+ + ++ LY
Sbjct: 60 KKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMN-MIKLY 118
Query: 100 NRTLR 104
+ +R
Sbjct: 119 GKPIR 123
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 125 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 184
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S + AI+ +G L NR T+ +A K ++ S L+++
Sbjct: 185 INFASFDASDAAIEAMNGQY-LCNRPITVSYAFKKDSKGERHGSAPERLLAAQ 236
>gi|209882389|ref|XP_002142631.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209558237|gb|EEA08282.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 213
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 20 RQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY 79
+QI N + +Y GNLD +V+E +L ++ Q G + +YIPRDK T GF F+E+
Sbjct: 18 QQIFDKNQEA--TLYCGNLDNRVDEELLAELFAQTGPIKSVYIPRDKVTGTHSGFGFIEF 75
Query: 80 ESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDK 112
+ YA ++ + V LY + +R + + QD+
Sbjct: 76 QQVLDCEYAQRILNS-VKLYGKPIRCSKASQDR 107
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGF 74
S++++Q+ + G N+++GNL ++E++L+DI G V+ + + + +G+
Sbjct: 103 ASQDRKQL-----DIGANLFVGNLSPDIDEKLLHDIFSLFGNVISTKVIFKENNEDERGY 157
Query: 75 AFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKS 129
FV Y+S AI +G NR T+ +A K ++ S L+S+ +
Sbjct: 158 GFVSYDSFNSSDNAIATLNGQF-FGNRQITVSYAFKQDCKGERHGSTAERLLASKNT 213
>gi|357617301|gb|EHJ70708.1| putative peptidyl-prolyl cis-trans isomerase E [Danaus plexippus]
Length = 303
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
M+ NS +Y+G L E+V+E++L I G +VD+ IP D E++K +GFAF+E+E+
Sbjct: 1 MASKPNSKRTIYVGGLAEEVDEKILNAAFIPFGDLVDVQIPLDYESEKHRGFAFIEFENA 60
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKS 129
E AI + L+ RT+R ++ + + S T P+ S S
Sbjct: 61 EDAAAAIDNMND-SELFGRTIRVNIAAPQRIKEGS---TRPVWSEDS 103
>gi|365986549|ref|XP_003670106.1| hypothetical protein NDAI_0E00470 [Naumovozyma dairenensis CBS 421]
gi|343768876|emb|CCD24863.1| hypothetical protein NDAI_0E00470 [Naumovozyma dairenensis CBS 421]
Length = 258
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%)
Query: 24 SGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
S SN +VY+GN+D V + LY++ +Q + + P+DK +G+AF+E+ + E
Sbjct: 42 SQMSNPELSVYVGNIDPNVTKAQLYELFVQVSPISKIAYPKDKLLQTHQGYAFIEFYTPE 101
Query: 84 IGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTT 122
+Y +K+ + V+LY+R L+ S Q+ + N+ TT
Sbjct: 102 DTNYVVKVMNNTVSLYDRFLKVRKSVQNLPSSNNKTYTT 140
>gi|291222246|ref|XP_002731128.1| PREDICTED: peptidylprolyl isomerase E-like [Saccoglossus
kowalevskii]
Length = 307
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
VY+G L E+V+E+VL+ I G +VD+ IP D ET+K +GF+FVE+E+ E AI
Sbjct: 8 VYVGGLAEEVDEKVLHAAFIPFGDLVDIQIPLDYETEKHRGFSFVEFENPEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 ND-SELFGRTIRVNLA 82
>gi|392884214|gb|AFM90939.1| peptidyl-prolyl cis-trans isomerase E-like protein [Callorhinchus
milii]
Length = 302
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+E+VL+ I G ++D+ IP D ET+K +GFAFVE+E+ E AI
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDIMDIQIPLDYETEKHRGFAFVEFENAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|387915672|gb|AFK11445.1| peptidyl-prolyl cis-trans isomerase E-like protein [Callorhinchus
milii]
Length = 302
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+E+VL+ I G ++D+ IP D ET+K +GFAFVE+E+ E AI
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDIMDIQIPLDYETEKHRGFAFVEFENAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|449488973|ref|XP_004186222.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E [Taeniopygia guttata]
Length = 271
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+E+VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|388579997|gb|EIM20315.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 260
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +YIGN+ E V++ +++++++QAG V +++P+D+ + +GF F E+ ++E Y
Sbjct: 12 NQEATIYIGNIPEAVSDAIIWELMLQAGPVASVHLPKDRVSMSHQGFGFCEFVNDEDAEY 71
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A K+ + I LY + +R + D+
Sbjct: 72 ACKIMNQI-KLYGKPIRVNKASTDR 95
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 10/126 (7%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLY-IPRDKETDKPKG 73
S +++QI + G N++IGNLD V+ER+L+D G ++D+ I RD +T KG
Sbjct: 91 ASTDRKQI-----DVGANLFIGNLDPGVDERLLFDTFSTFGLMMDVAKIARD-DTGYSKG 144
Query: 74 FAFVEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ F++Y + AI +G L N+ T+ +A K ++ + L++ R+
Sbjct: 145 YGFIQYNDFDSSDQAISAMNG-QYLMNKPLTVDYAFKKDGKGERHGTEAERMLAAEAKRN 203
Query: 132 DPVPMP 137
+ +PMP
Sbjct: 204 NALPMP 209
>gi|148665852|gb|EDK98268.1| RNA binding motif protein 11, isoform CRA_a [Mus musculus]
Length = 254
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 14/117 (11%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
V++GNL+ +V E +LY++ +QAG + + + +D++ KPK F FV ++ E YAI L
Sbjct: 11 TVFVGNLEARVREEILYELFLQAGPLTKVTLCKDRD-GKPKSFGFVCFKHPESVSYAIAL 69
Query: 92 FSGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSD--------PVPM 136
+GI LY R + RF S + A S + ++S R+D PVP
Sbjct: 70 LNGI-RLYGRPINVQYRFGSSRSSEPANQSFESCAKINSHSFRNDEMAGRPSFPVPF 125
>gi|195997155|ref|XP_002108446.1| hypothetical protein TRIADDRAFT_19129 [Trichoplax adhaerens]
gi|190589222|gb|EDV29244.1| hypothetical protein TRIADDRAFT_19129, partial [Trichoplax
adhaerens]
Length = 102
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+GNLD+KV +++LY++ ++AG + + +P+D T +G+ FV Y YA +LF
Sbjct: 21 LYVGNLDKKVTDKILYELFVKAGSISRINLPKDDTTGDIRGYGFVYYNRNVSALYATELF 80
Query: 93 SGIVTLYNRTLRFALSGQDKNA 114
+G++ L+ + +R L+ +++ +
Sbjct: 81 NGLL-LFQKPMRVNLNSKERKS 101
>gi|157787052|ref|NP_001099368.1| RNA binding motif protein 11 [Rattus norvegicus]
gi|149059696|gb|EDM10579.1| RNA binding motif protein 11 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 144
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
V++GNL+ +V E +LY++ +QAG + + + +D++ KPK F FV ++ E YAI L
Sbjct: 11 TVFVGNLEARVREEILYELFLQAGPLTKVTLCKDRD-GKPKSFGFVCFKHPESVSYAIAL 69
Query: 92 FSGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSD 132
+GI LY R + RF S + A S + ++S R+D
Sbjct: 70 LNGI-RLYGRPINVQYRFGSSRSSEPANQSFESCAKINSHSFRND 113
>gi|297707634|ref|XP_002830605.1| PREDICTED: putative RNA-binding protein 11 [Pongo abelii]
Length = 281
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 93 SGIVTLYNRTL 103
+GI LY R +
Sbjct: 71 NGI-RLYGRPI 80
>gi|327285414|ref|XP_003227428.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Anolis
carolinensis]
Length = 301
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+ERVL+ I G + D+ IP D ET+K +GFAF+E+E E AI
Sbjct: 8 LYVGGLAEEVDERVLHAAFIPFGDITDIQIPLDYETEKHRGFAFIEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|390478095|ref|XP_003735419.1| PREDICTED: putative RNA-binding protein 11-like [Callithrix
jacchus]
Length = 238
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 93 SGIVTLYNRTL 103
+GI LY R +
Sbjct: 71 NGI-RLYGRPI 80
>gi|395526569|ref|XP_003765433.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E [Sarcophilus
harrisii]
Length = 301
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+E+VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALSGQDKNAQNSS 118
+ L+ RT+R L+ K + SS
Sbjct: 68 NE-SELFGRTIRVNLAKPMKIKEGSS 92
>gi|403286148|ref|XP_003934367.1| PREDICTED: putative RNA-binding protein 11 [Saimiri boliviensis
boliviensis]
Length = 237
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 93 SGIVTLYNRTL 103
+GI LY R +
Sbjct: 71 NGI-RLYGRPI 80
>gi|148693757|gb|EDL25704.1| mCG9666, isoform CRA_a [Mus musculus]
Length = 116
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ K K FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKD-GKLKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI L+ R ++ SG +Q++S++
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHASQDASVS 98
>gi|402467760|gb|EJW03010.1| hypothetical protein EDEG_02592 [Edhazardia aedis USNM 41457]
Length = 213
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
GC VY+GN+D + E+ L + L GRVV+ + DK+T + KG+ F EYE+ I A+
Sbjct: 4 GCTVYVGNIDFDITEQELIEKLSSIGRVVNFKMMIDKQTGRSKGYGFCEYETPLIAETAV 63
Query: 90 KLFSGIVTLYNRTLRFALSGQDKNAQNSSM--TTTPLSSRKSRSDPV 134
+ V L NR L+ + D ++ + + P+ S KS D +
Sbjct: 64 QKLK--VVLNNRQLKINYADVDMSSSRKEIPQVSLPIESLKSVVDEM 108
>gi|390360868|ref|XP_793337.3| PREDICTED: RNA-binding protein 7-like [Strongylocentrotus
purpuratus]
Length = 353
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
N + +++GNLD +V + +L+++ +QAG + + I +DKE ++ + FAFVE++ +
Sbjct: 2 NDQADRTLWVGNLDPRVTDEILFELFLQAGPLQHVNIAKDKEGNQ-RNFAFVEFKHDVSV 60
Query: 86 HYAIKLFSGIVTLYNRTLRFAL 107
Y+++L G+ L+NR LR
Sbjct: 61 PYSMQLMGGLA-LFNRGLRLQF 81
>gi|344233005|gb|EGV64878.1| hypothetical protein CANTEDRAFT_104351 [Candida tenuis ATCC 10573]
Length = 241
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 20 RQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY 79
R+ + N ++YIGNLD KV E +LY++ +Q V L++P+D+ +GF FVE+
Sbjct: 6 RKANENDRNVEASLYIGNLDPKVTETILYELFVQFAPVRSLHLPKDRVLRAHQGFGFVEF 65
Query: 80 ESEEIGHYAIKLFSGIVTLYNRTLRF 105
++ + Y + G V LY + LR
Sbjct: 66 KNPKDTEYVVSALKG-VRLYGKLLRL 90
>gi|126330203|ref|XP_001365208.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Monodelphis
domestica]
Length = 301
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+E+VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALSGQDKNAQNSS 118
+ L+ RT+R L+ K + SS
Sbjct: 68 NE-SELFGRTIRVNLAKPMKIKEGSS 92
>gi|27753952|ref|NP_659197.2| RNA-binding protein 7 [Mus musculus]
gi|55976586|sp|Q9CQT2.1|RBM7_MOUSE RecName: Full=RNA-binding protein 7; AltName: Full=RNA-binding
motif protein 7
gi|18141295|gb|AAL60585.1|AF458961_1 RNA binding motif protein 7 [Mus musculus]
gi|12837596|dbj|BAB23878.1| unnamed protein product [Mus musculus]
gi|12839998|dbj|BAB24729.1| unnamed protein product [Mus musculus]
gi|12842963|dbj|BAB25804.1| unnamed protein product [Mus musculus]
gi|74181616|dbj|BAE30073.1| unnamed protein product [Mus musculus]
gi|109733079|gb|AAI16932.1| RNA binding motif protein 7 [Mus musculus]
gi|111600453|gb|AAI19039.1| RNA binding motif protein 7 [Mus musculus]
gi|148693760|gb|EDL25707.1| mCG9666, isoform CRA_d [Mus musculus]
Length = 265
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ K K FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KLKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI L+ R ++ SG +Q++S++
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHASQDASVS 98
>gi|32493337|gb|AAH54774.1| RNA binding motif protein 7 [Mus musculus]
Length = 265
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ K K FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KLKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI L+ R ++ SG +Q++S++
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHASQDASVS 98
>gi|405968843|gb|EKC33872.1| Peptidyl-prolyl cis-trans isomerase E [Crassostrea gigas]
Length = 302
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
VY+G L E+V+E+ L+ I G ++D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 9 VYVGGLAEEVDEKTLHAAFIPFGDILDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 68
Query: 93 SGIVTLYNRTLRFALSGQDKNAQNSS 118
+ ++ RTLR ++ K + SS
Sbjct: 69 ND-SEMFGRTLRVNMAKPMKLKEGSS 93
>gi|50290493|ref|XP_447678.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526988|emb|CAG60615.1| unnamed protein product [Candida glabrata]
Length = 211
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
S+ +Y+GN+D KV + +LY++ Q G+V + P+DK + + +GFAF+E+ S
Sbjct: 2 SDPEATIYVGNIDTKVTKELLYELFTQVGQVKKVKYPKDKISQEYQGFAFIEFFSTADAD 61
Query: 87 YAIKLFSGIVTLYNRTLRFALSGQ 110
Y + + + V LY + L+ S Q
Sbjct: 62 YVLNVMNNNVKLYQKVLKIRRSNQ 85
>gi|354494485|ref|XP_003509367.1| PREDICTED: RNA-binding protein 7-like [Cricetulus griseus]
gi|344237164|gb|EGV93267.1| RNA-binding protein 7 [Cricetulus griseus]
Length = 265
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL+ KV E +L+++ QAG V+ + IP+DK+ K K FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KLKQFAFVNFKHEVSVPYAMNLL 70
Query: 93 SGIVTLYNRTLRFAL-SGQDKNAQNSSMT 120
+GI L+ R ++ SG +Q++S++
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHASQDASVS 98
>gi|171693953|ref|XP_001911901.1| hypothetical protein [Podospora anserina S mat+]
gi|170946925|emb|CAP73729.1| unnamed protein product [Podospora anserina S mat+]
Length = 403
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+GN+DE+ + +L +++ Q G V +++P D+ T +G+ F+E+++ E Y
Sbjct: 19 NKDATVYVGNIDERFTQELLTELMTQVGPVRQVHMPLDRVTRNHQGYGFIEFDTPESAEY 78
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKN 113
A K +GI ++ + LR + DK
Sbjct: 79 AAKCLNGI-RVHGKPLRVNKASADKQ 103
Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G ++I NLD +V+E++LYD G+++ I RD + + KG+ FV ++S E A
Sbjct: 109 GAELFINNLDPQVDEKILYDTFSTFGQILRQPNIVRD-DNNISKGYGFVSFDSFEASDAA 167
Query: 89 IKLFSG 94
+ +G
Sbjct: 168 LANMNG 173
>gi|299473131|emb|CBN78707.1| Peptidyl-prolyl cis-trans isomerase E [Ectocarpus siliculosus]
Length = 135
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
NVY+G L+E+VNE +L+ + G +V++ +P+D + +GF FVE+E EE AI
Sbjct: 10 NVYVGGLEEQVNEEILHAAFVPFGDIVEVNLPKDHVANTHRGFGFVEFEVEEDAKAAIDN 69
Query: 92 FSGIVTLYNRTLR 104
G LY + LR
Sbjct: 70 MDG-AELYGKVLR 81
>gi|429964943|gb|ELA46940.1| hypothetical protein VCUG_01559 [Vavraia culicis 'floridensis']
Length = 202
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 29 SGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
GC+V++GN+D V E L + L GRVV + D +T K KG+ F EYE++EI A
Sbjct: 3 KGCSVFVGNIDFDVPEEKLIEQLGTIGRVVSFRMVYDHKTKKSKGYGFCEYENKEIAQLA 62
Query: 89 IKLFSGIVTLYNRTLRFALSGQDKNAQNSS 118
+K + ++ NR ++ + D +NSS
Sbjct: 63 VKTLN--ISFNNRQVKINYAENDMKRKNSS 90
>gi|311270146|ref|XP_003132786.1| PREDICTED: putative RNA-binding protein 11-like [Sus scrofa]
Length = 237
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Query: 22 IMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYES 81
+ S + V++GNL+ +V E +LY++ +QAG + + I +D++ + PK F FV ++
Sbjct: 1 MFSAQEEADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDRDGN-PKSFGFVCFKH 59
Query: 82 EEIGHYAIKLFSGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSDPV 134
E YAI L +GI LY R + RF S + A S + ++S R++ V
Sbjct: 60 PESVSYAIALLNGI-RLYGRPINVQYRFGSSRSCEPANQSFESCVKINSHSYRNEEV 115
>gi|387017750|gb|AFJ50993.1| Peptidyl-prolyl cis-trans isomerase E-like [Crotalus adamanteus]
Length = 301
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+ERVL+ I G + D+ IP D ET+K +GFAF+E+E E AI
Sbjct: 8 LYVGGLAEEVDERVLHAAFIPFGDLTDIQIPLDYETEKHRGFAFIEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|1279382|emb|CAA65831.1| spliceosomal protein [Drosophila melanogaster]
Length = 366
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 20/96 (20%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRV-------------------VDLYIPRDKET 68
N +Y G LD+KV+E +L+++ +QAG V V++++P+D+ T
Sbjct: 10 NQDATIYAGGLDDKVSETLLWELFVQAGPVGKSGHTCIVPSSSLIVMLAVNVHMPKDRVT 69
Query: 69 DKPKGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLR 104
+G+ FVE+ SEE Y IK+ + ++ LY + +R
Sbjct: 70 QMHQGYGFVEFLSEEDADYGIKIMN-MIKLYGKPIR 104
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET K K FAF
Sbjct: 106 NKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAF 165
Query: 77 VEYESEEIGHYAIKLFSG 94
+ + S E A+ +G
Sbjct: 166 INFASFEASDAAMDAMNG 183
>gi|336257859|ref|XP_003343751.1| NAM8/MRE2 protein [Sordaria macrospora k-hell]
gi|380091622|emb|CCC10754.1| putative NAM8/MRE2 protein [Sordaria macrospora k-hell]
Length = 390
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+GN+DE+ + +L +++ Q G V +++P+D+ + +G+ FVE+++ Y
Sbjct: 8 NKDATVYVGNIDERFTQELLSELMTQVGPVRQVHMPQDRVSQTHQGYGFVEFDTPASAEY 67
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKN 113
A K+ +GI ++ + +R + DK
Sbjct: 68 AAKVLNGI-RIWGKPIRVNKASADKQ 92
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G ++I NLD +V+E++LYD Q G+++ I RD + + KG+ FV + S E A
Sbjct: 98 GAELFINNLDPQVDEKILYDTFSQFGQILRQPNIVRD-DNNISKGYGFVSFGSFEASDAA 156
Query: 89 IKLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVP 135
+G L + T+ +A K ++ L++ + + VP
Sbjct: 157 RATMNGQYLLSKQITVEYAYKKDGKGERHGDEAERKLAAEGKKHNIVP 204
>gi|118101790|ref|XP_423739.2| PREDICTED: peptidyl-prolyl cis-trans isomerase E [Gallus gallus]
Length = 301
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+E+VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|451854358|gb|EMD67651.1| hypothetical protein COCSADRAFT_168831 [Cochliobolus sativus
ND90Pr]
Length = 331
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+GNL E+V R+L+++++ GRV ++ +P D+ + + F FVE+ +E Y
Sbjct: 12 NKEATVYVGNLHERVTPRILHELMLNTGRVRNVNMPVDRVNGQHQSFGFVEFHTEAEADY 71
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKN 113
A K+ + V LY +R + DK
Sbjct: 72 ASKILNN-VALYGSRIRVNKASADKQ 96
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 84
N G +++GNLD V+E+ LYD + G +V+ + RD+ T KG+ F+ Y E
Sbjct: 98 NVEIGAELFVGNLDPGVDEKTLYDTFSRFGPLVNAPKVARDEVTTASKGYGFISYGDFES 157
Query: 85 GHYAI 89
AI
Sbjct: 158 SDAAI 162
>gi|121543726|gb|ABM55548.1| putative peptidyl-prolyl cis-trans isomerase E [Maconellicoccus
hirsutus]
Length = 291
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L ++++E++L ++ + G ++D+ IP D ET+K +GFAF+E+E+ E AI
Sbjct: 9 IYVGGLADELDEKILNNVFLTFGDILDIQIPLDYETEKHRGFAFIEFEAPEDAAAAIDNM 68
Query: 93 SGIVTLYNRTLRFALSGQDKNAQNSS 118
+ L+ RT+R L+ K + S+
Sbjct: 69 NE-SELFGRTMRVNLAKPQKVKEGST 93
>gi|345319884|ref|XP_001515609.2| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like isoform 1
[Ornithorhynchus anatinus]
Length = 300
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+E+VL+ I G + D+ IP D ET+K +GFAF+E+E E AI
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFIEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|336472211|gb|EGO60371.1| hypothetical protein NEUTE1DRAFT_119564 [Neurospora tetrasperma
FGSC 2508]
gi|350294569|gb|EGZ75654.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 390
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+GN+DE+ + +L +++ Q G V +++P+D+ + +G+ FVE+++ Y
Sbjct: 8 NKDATVYVGNIDERFTQELLSELMTQVGPVRQVHMPQDRVSQTHQGYGFVEFDTPASAEY 67
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKN 113
A K+ +GI ++ + +R + DK
Sbjct: 68 AAKVLNGI-RIWGKPIRVNKASADKQ 92
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G ++I NLD +V+E++LYD Q G+++ I RD + + KG+ FV + S E A
Sbjct: 98 GAELFINNLDPQVDEKILYDTFSQFGQILRQPNIVRD-DNNISKGYGFVSFGSFEASDAA 156
Query: 89 IKLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVP 135
+G L + T+ +A K ++ L++ + + VP
Sbjct: 157 RATMNGQYLLSKQITVEYAYKKDGKGERHGDEAERKLAAEGKKHNIVP 204
>gi|116198017|ref|XP_001224820.1| hypothetical protein CHGG_07164 [Chaetomium globosum CBS 148.51]
gi|88178443|gb|EAQ85911.1| hypothetical protein CHGG_07164 [Chaetomium globosum CBS 148.51]
Length = 529
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+GN+DE+ + +L +++ Q G V +++P+D+ + +G+ FVE+++ Y
Sbjct: 136 NKDATVYVGNIDERFTQELLSELMTQVGPVRQVHMPQDRVSQTHQGYGFVEFDTPASAEY 195
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKN 113
A K+ +GI ++ + +R + DK
Sbjct: 196 ASKVLNGI-RIWGKPIRVNKASADKQ 220
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G ++I NLD +V+E++LYD Q G+++ I RD + + KG+ FV ++S E A
Sbjct: 226 GAELFINNLDPQVDEKILYDTFSQFGQILRQPNIVRD-DNNISKGYGFVSFDSFEASDAA 284
Query: 89 IKLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVP 135
+ +G L T+ +A K ++ L++ + + VP
Sbjct: 285 VGTMNGQYLLSKSITVEYAYKKDGKGERHGDEAERKLAAEGKKHNIVP 332
>gi|451999433|gb|EMD91895.1| hypothetical protein COCHEDRAFT_1154917 [Cochliobolus
heterostrophus C5]
Length = 331
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+GNL E+V R+L+++++ GRV ++ +P D+ + + F FVE+ +E Y
Sbjct: 12 NKEATVYVGNLHERVTPRILHELMLNTGRVRNVNMPVDRVNGQHQSFGFVEFHTEAEADY 71
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKN 113
A K+ + V LY +R + DK
Sbjct: 72 ASKILNN-VALYGSRIRVNKASADKQ 96
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 84
N G +++GNLD V+E+ LYD + G +V+ + RD+ T KG+ F+ Y E
Sbjct: 98 NVEIGAELFVGNLDPGVDEKTLYDTFSRFGPLVNAPKVARDEVTTASKGYGFISYGDFES 157
Query: 85 GHYAI 89
AI
Sbjct: 158 SDAAI 162
>gi|123485827|ref|XP_001324580.1| spliceosomal protein [Trichomonas vaginalis G3]
gi|121907465|gb|EAY12357.1| spliceosomal protein, putative [Trichomonas vaginalis G3]
Length = 221
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
+ N C +++ ++ E V E +L ++ +Q G VV + IPRD+ T++ G+AFVE+ +E+
Sbjct: 7 DQNKDCTLFLCDISEHVTEEILTELFMQVGPVVFVNIPRDRITNRMNGYAFVEFRTEQDC 66
Query: 86 HYAIKLFSGIVTLYNRTLRFA 106
YA+ + G V L+ L+ +
Sbjct: 67 MYALSVMQG-VKLFGVPLKLS 86
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G +YIGNL + VN+ L Q G V+ + D T K G FV Y+S + A
Sbjct: 100 GAKLYIGNLSQDVNDGNLLQTFRQFGNVLHARVVVDPATGKSLGHGFVAYDSFDAADKAK 159
Query: 90 KLFSG 94
K +G
Sbjct: 160 KAMNG 164
>gi|268569440|ref|XP_002640523.1| Hypothetical protein CBG18685 [Caenorhabditis briggsae]
Length = 84
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
S SG +VY+GN + E+ + D AG V ++ I D+ET +P+GFAFVE+ E +
Sbjct: 2 SGSGFSVYVGNAPYQTTEQEMGDFFATAGEVTNVRIVLDRETGRPRGFAFVEFAEEAGAN 61
Query: 87 YAIKLFSGIVTLYN-RTLRFALS 108
A++ F+G T +N R+LR L+
Sbjct: 62 RAVEQFNG--TDFNGRSLRVNLA 82
>gi|332375218|gb|AEE62750.1| unknown [Dendroctonus ponderosae]
Length = 223
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
VY+G L E++ E VL I G +VD+ IP D E++K +GFAF+E+E+ E A+
Sbjct: 9 VYVGGLAEEICEEVLKAAFIPFGDIVDIQIPLDYESEKHRGFAFIEFETSEDAGAAVDNM 68
Query: 93 SGIVTLYNRTLRFALSGQDKNAQNSS 118
+ L+ RT+R L+ K + S+
Sbjct: 69 ND-AELFGRTIRVNLAKPQKIKEGST 93
>gi|47219549|emb|CAG09903.1| unnamed protein product [Tetraodon nigroviridis]
Length = 326
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+YIG L E+V+E+VL+ I G ++D+ IP D ET+K +GFAF+E+E E AI
Sbjct: 8 LYIGGLAEEVDEKVLHAAFIPFGDLIDIQIPLDYETEKHRGFAFIEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLR 104
+ L+ RT+R
Sbjct: 68 NE-SELFGRTIR 78
>gi|219130389|ref|XP_002185349.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403264|gb|EEC43218.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 328
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+GNLD+ +E +L ++ Q GRV +Y+P+DK + + G+ FVEY Y
Sbjct: 11 NQDATVYVGNLDQACSEELLTELFSQVGRVASVYMPKDKLSGQHNGYGFVEYLDAVDADY 70
Query: 88 AIKLFSGIVTLYNRTLR 104
A+ + ++ L+ R +R
Sbjct: 71 AMTILH-MMKLFGRPVR 86
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 12 NDVVSRNKRQIMSGNSNSGCNVYIGNLDE-KVNERVLYDILIQAGRVVDL-YIPRDKETD 69
ND R+ R I G N++IGN+D VNE++LY+ G +V I RD+ T
Sbjct: 93 NDEEGRHSRDI-------GANLFIGNVDPIDVNEQLLYETFTAFGTLVRTPNIARDEATQ 145
Query: 70 KPKGFAFVEYESEEIGHYAIKLFSG 94
+ KGFAF+ Y+S + AI+L +G
Sbjct: 146 QSKGFAFLSYDSFQAADMAIELMNG 170
>gi|255572355|ref|XP_002527116.1| mRNA splicing factor, putative [Ricinus communis]
gi|223533539|gb|EEF35279.1| mRNA splicing factor, putative [Ricinus communis]
Length = 509
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
M+ +S C V++GN+ E L DI + G VV + D+ET KPKG+ F EY+ E
Sbjct: 1 MASSSQQRC-VFVGNIPYDATEEQLIDICREVGPVVSFRLVIDRETGKPKGYGFCEYKDE 59
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDKNA 114
E A + G + R LR + DKNA
Sbjct: 60 ETALSARRNLQG-YEINGRQLRVDFAENDKNA 90
>gi|85101406|ref|XP_961142.1| hypothetical protein NCU04182 [Neurospora crassa OR74A]
gi|11595719|emb|CAC18197.1| probable spliceosome-associated protein SAP-49 [Neurospora crassa]
gi|28922682|gb|EAA31906.1| hypothetical protein NCU04182 [Neurospora crassa OR74A]
Length = 390
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+GN+DE+ + +L +++ Q G V +++P+D+ + +G+ FVE+++ Y
Sbjct: 8 NKDATVYVGNIDERFTQELLSELMTQVGPVRQVHMPQDRVSQTHQGYGFVEFDTPASAEY 67
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKN 113
A K+ +GI ++ + +R + DK
Sbjct: 68 AAKVLNGI-RVWGKPIRVNKASADKQ 92
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G ++I NLD +V+E++LYD Q G+++ I RD + + KG+ FV + S E A
Sbjct: 98 GAELFINNLDPQVDEKILYDTFSQFGQILRQPNIVRD-DNNISKGYGFVSFGSFEASDAA 156
Query: 89 IKLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVP 135
+G L + T+ +A K ++ L++ + + VP
Sbjct: 157 RATMNGQYLLSKQITVEYAYKKDGKGERHGDEAERKLAAEGKKHNIVP 204
>gi|410898226|ref|XP_003962599.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Takifugu
rubripes]
gi|19526273|gb|AAL89667.1|AF411956_8 cyclophilin [Takifugu rubripes]
Length = 300
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+YIG L E+V+E+VL+ I G ++D+ IP D ET+K +GFAF+E+E E AI
Sbjct: 8 LYIGGLAEEVDEKVLHAAFIPFGDLIDIQIPLDYETEKHRGFAFIEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R ++
Sbjct: 68 NE-SELFGRTIRVNIA 82
>gi|350404096|ref|XP_003487002.1| PREDICTED: hypothetical protein LOC100742776 [Bombus impatiens]
Length = 195
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++ GNL +KV E +LY++ +QAG V ++ IP+D+ K + F FV Y+ YA++LF
Sbjct: 8 LWCGNLSDKVTEEILYELFLQAGPVQNVTIPKDR-NGKQRPFGFVTYKHVNSVLYALELF 66
Query: 93 SGIVTLYNRTLRFA 106
+G +L+NR L +
Sbjct: 67 NG-TSLFNRILNIS 79
>gi|348517411|ref|XP_003446227.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Oreochromis
niloticus]
Length = 302
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+E+VL+ I G ++D+ IP D ET+K +GFAF+E+E E AI
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDIIDIQIPLDYETEKHRGFAFIEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R ++
Sbjct: 68 NE-SELFGRTVRVNIA 82
>gi|332248424|ref|XP_003273363.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 2
[Nomascus leucogenys]
Length = 314
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|159163861|pdb|2CQB|A Chain A, Solution Structure Of The Rna Recognition Motif In
Peptidyl- Prolyl Cis-Trans Isomerase E
Length = 102
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 24 SGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
SG + + +Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E
Sbjct: 6 SGMATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAE 65
Query: 84 IGHYAIKLFSGIVTLYNRTLRFALS 108
AI + L+ RT+R L+
Sbjct: 66 DAAAAIDNMNE-SELFGRTIRVNLA 89
>gi|358060581|dbj|GAA93700.1| hypothetical protein E5Q_00345 [Mixia osmundae IAM 14324]
Length = 641
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 12 NDVVSRNKRQIMSGNSN------SGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRD 65
N + + N RQ+ G + +Y+G LDE + E + I Q G VV++ +PRD
Sbjct: 5 NQIRTINARQLELGGGSWHDEYRESAYIYMGGLDEALTEGDVITIASQYGEVVNVEMPRD 64
Query: 66 KETDKPKGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLR 104
K T KP+GFAFV YE + A+ +G L RTLR
Sbjct: 65 KTTHKPRGFAFVMYEDQRSTVLAVDNLTG-SKLLERTLR 102
>gi|366989575|ref|XP_003674555.1| hypothetical protein NCAS_0B00950 [Naumovozyma castellii CBS 4309]
gi|342300419|emb|CCC68179.1| hypothetical protein NCAS_0B00950 [Naumovozyma castellii CBS 4309]
Length = 219
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
+N VY+GN+D KV + LY++ IQ + L P+DK +G+AF+E+ + +
Sbjct: 6 NNPETTVYVGNIDPKVTKEQLYELFIQVSPISKLRYPKDKILQMHQGYAFIEFYTAKDVQ 65
Query: 87 YAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPM 136
Y I++ + V LY+R L+ S Q+ SSM S ++S +P+
Sbjct: 66 YVIQVMNNTVALYDRFLKVRQSVQNP---TSSMGGANTSENSNQSIVLPI 112
>gi|148232600|ref|NP_001086129.1| RNA binding motif protein 11 [Xenopus laevis]
gi|49257848|gb|AAH74235.1| MGC83967 protein [Xenopus laevis]
Length = 255
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNLD VNE +LY++ +QAG + I +DKE + K F F+ ++ E YA L
Sbjct: 12 LFVGNLDCNVNEEILYELFLQAGPLTKATIAKDKEGNS-KAFGFIRFKHSESVPYAKALL 70
Query: 93 SGIVTLYNRTLRF------ALSGQDKNA-QNSSMTTTPLSSRKSRSDP 133
+GI LY R ++ + S ++ NA Q+S+ TP S P
Sbjct: 71 NGI-RLYGRAIKVHYQFGSSFSSEETNAPQSSANGFTPYPQDYGMSGP 117
>gi|452981005|gb|EME80765.1| hypothetical protein MYCFIDRAFT_139429 [Pseudocercospora fijiensis
CIRAD86]
Length = 301
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
M+ G V+IGN+ V+E + DI +AG+VV+ + DKET +PKGF F+EY
Sbjct: 1 MAQREKGGRVVFIGNIPYGVSEEQIMDIFGRAGQVVNFRLVYDKETGQPKGFGFLEYTDT 60
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMT 120
+ A++ + L RTLR S ++ N + T
Sbjct: 61 DAAASAVRNLNDF-DLKGRTLRVDYSNDNRGTSNQNQT 97
>gi|303305009|ref|NP_001181936.1| peptidyl-prolyl cis-trans isomerase E isoform 4 [Homo sapiens]
gi|208967014|dbj|BAG73521.1| peptidylprolyl isomerase E [synthetic construct]
Length = 314
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|444315954|ref|XP_004178634.1| hypothetical protein TBLA_0B02730 [Tetrapisispora blattae CBS
6284]
gi|387511674|emb|CCH59115.1| hypothetical protein TBLA_0B02730 [Tetrapisispora blattae CBS
6284]
Length = 255
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 42/60 (70%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+GNLD ++ + LY++ IQ G++ + PRDK ++ +GFAFVE++S + +Y + LF
Sbjct: 26 IYVGNLDPRITKLDLYELFIQFGKIYKINYPRDKISENYQGFAFVEFQSAKDSNYVLSLF 85
>gi|185177638|pdb|2YWK|A Chain A, Crystal Structure Of Rrm-Domain Derived From Human
Putative Rna-Binding Protein 11
Length = 95
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 18 TVFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIAL 76
Query: 92 FSGIVTLYNRTL 103
+GI LY R +
Sbjct: 77 LNGI-RLYGRPI 87
>gi|358060582|dbj|GAA93701.1| hypothetical protein E5Q_00346 [Mixia osmundae IAM 14324]
Length = 645
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 12 NDVVSRNKRQIMSGNSN------SGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRD 65
N + + N RQ+ G + +Y+G LDE + E + I Q G VV++ +PRD
Sbjct: 5 NQIRTINARQLELGGGSWHDEYRESAYIYMGGLDEALTEGDVITIASQYGEVVNVEMPRD 64
Query: 66 KETDKPKGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLR 104
K T KP+GFAFV YE + A+ +G L RTLR
Sbjct: 65 KTTHKPRGFAFVMYEDQRSTVLAVDNLTG-SKLLERTLR 102
>gi|73917051|gb|AAZ93379.1| cyclophilin-33B [Homo sapiens]
Length = 314
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|326431234|gb|EGD76804.1| RNA-binding protein 7 [Salpingoeca sp. ATCC 50818]
Length = 899
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 22 IMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYES 81
I+S S +Y+GNLD +V + +LY++ +QA V + I RD E + P+GFAFV+
Sbjct: 278 ILSAPCRSNSTLYVGNLDTRVTDEILYELFLQACPVDGVAIARDPEGN-PRGFAFVDCVD 336
Query: 82 EEIGHYAIKLFSGIVTLYNRTLRF 105
YA +L +G V L+ + +R
Sbjct: 337 VPSALYAKQLLNG-VALFGKHIRI 359
>gi|332248426|ref|XP_003273364.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 3
[Nomascus leucogenys]
Length = 296
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|213512892|ref|NP_001134807.1| peptidyl-prolyl cis-trans isomerase E [Salmo salar]
gi|209736222|gb|ACI68980.1| Peptidyl-prolyl cis-trans isomerase E [Salmo salar]
Length = 302
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+E+VL+ I G V D+ IP D ET+K +GFAF+E+E E AI
Sbjct: 8 LYVGGLTEEVDEKVLHAAFIPFGDVTDIQIPIDYETEKHRGFAFIEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLR 104
+ L+ RT+R
Sbjct: 68 NE-SELFGRTIR 78
>gi|291399196|ref|XP_002715239.1| PREDICTED: peptidylprolyl isomerase E [Oryctolagus cuniculus]
Length = 296
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|119627661|gb|EAX07256.1| peptidylprolyl isomerase E (cyclophilin E), isoform CRA_b [Homo
sapiens]
gi|410226050|gb|JAA10244.1| peptidylprolyl isomerase E (cyclophilin E) [Pan troglodytes]
gi|410268070|gb|JAA22001.1| peptidylprolyl isomerase E (cyclophilin E) [Pan troglodytes]
gi|410307920|gb|JAA32560.1| peptidylprolyl isomerase E (cyclophilin E) [Pan troglodytes]
Length = 296
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|431922548|gb|ELK19491.1| Peptidyl-prolyl cis-trans isomerase E [Pteropus alecto]
Length = 301
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|410966852|ref|XP_003989941.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 2 [Felis
catus]
Length = 296
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|45439316|ref|NP_982281.1| peptidyl-prolyl cis-trans isomerase E isoform 2 [Homo sapiens]
gi|2828151|gb|AAC00007.1| cyclophilin-33B [Homo sapiens]
gi|4406229|gb|AAD19907.1| peptidyl-prolyl cis-trans isomerase E [Homo sapiens]
Length = 296
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|149693770|ref|XP_001503484.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like isoform 2
[Equus caballus]
Length = 296
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|444706912|gb|ELW48229.1| Peptidyl-prolyl cis-trans isomerase E [Tupaia chinensis]
Length = 301
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|348553004|ref|XP_003462317.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Cavia
porcellus]
Length = 301
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|344287649|ref|XP_003415565.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Loxodonta
africana]
Length = 301
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|351713681|gb|EHB16600.1| Peptidyl-prolyl cis-trans isomerase E [Heterocephalus glaber]
Length = 301
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|238231621|ref|NP_001153996.1| peptidyl-prolyl cis-trans isomerase E [Oncorhynchus mykiss]
gi|225703282|gb|ACO07487.1| Peptidyl-prolyl cis-trans isomerase E [Oncorhynchus mykiss]
Length = 302
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI--- 89
+Y+G L E+V+E+VL+ I G V D+ IP D ET+K +GFAF+E+E E AI
Sbjct: 8 LYVGGLTEEVDEKVLHAAFIPFGDVTDIQIPIDYETEKHRGFAFIEFELAEDAAAAIDNM 67
Query: 90 ---KLFSGIV 96
+LF G +
Sbjct: 68 NESELFGGTI 77
>gi|432893293|ref|XP_004075907.1| PREDICTED: RNA-binding protein 7-like isoform 1 [Oryzias latipes]
Length = 260
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++I NLD KV E +L+++ +QAG +V IP+D + + K F FV Y+ E YA++L
Sbjct: 11 LFIRNLDSKVTEELLFELFLQAGPLVRTKIPKDTD-GRQKTFGFVVYKHEVSAPYAMQLL 69
Query: 93 SGIVTLYNRTLRFAL-SGQDK-----NAQNSSMTTTP 123
G +L+ R + SG N+QNSS TP
Sbjct: 70 DG-TSLFGRNIHVQFRSGSSHGSTPGNSQNSSPAITP 105
>gi|109002460|ref|XP_001113613.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 3 [Macaca
mulatta]
gi|332248422|ref|XP_003273362.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 1
[Nomascus leucogenys]
gi|402854044|ref|XP_003891690.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E [Papio anubis]
Length = 301
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|403292044|ref|XP_003937068.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 1 [Saimiri
boliviensis boliviensis]
Length = 301
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|296207581|ref|XP_002750690.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 1
[Callithrix jacchus]
Length = 301
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|197098002|ref|NP_001126436.1| peptidyl-prolyl cis-trans isomerase E [Pongo abelii]
gi|75041350|sp|Q5R723.1|PPIE_PONAB RecName: Full=Peptidyl-prolyl cis-trans isomerase E; Short=PPIase
E; AltName: Full=Cyclophilin E; AltName: Full=Rotamase E
gi|55731450|emb|CAH92437.1| hypothetical protein [Pongo abelii]
Length = 301
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|14196340|ref|NP_062362.1| peptidyl-prolyl cis-trans isomerase E [Mus musculus]
gi|37154834|sp|Q9QZH3.2|PPIE_MOUSE RecName: Full=Peptidyl-prolyl cis-trans isomerase E; Short=PPIase
E; AltName: Full=Cyclophilin E; AltName:
Full=Cyclophilin-33; AltName: Full=Rotamase E
gi|12842203|dbj|BAB25512.1| unnamed protein product [Mus musculus]
gi|28278787|gb|AAH45154.1| Peptidylprolyl isomerase E (cyclophilin E) [Mus musculus]
gi|148698442|gb|EDL30389.1| peptidylprolyl isomerase E (cyclophilin E) [Mus musculus]
Length = 301
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|311258960|ref|XP_003127865.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like isoform 1
[Sus scrofa]
Length = 301
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|301624824|ref|XP_002941698.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Xenopus
(Silurana) tropicalis]
Length = 301
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+E++L+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDEKILHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELPEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|114145536|ref|NP_001041333.1| peptidyl-prolyl cis-trans isomerase E [Rattus norvegicus]
gi|33086482|gb|AAP92553.1| Ab1-210 [Rattus norvegicus]
Length = 255
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|2828149|gb|AAC00006.1| cyclophilin-33A [Homo sapiens]
Length = 301
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|73976759|ref|XP_848739.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 2 [Canis
lupus familiaris]
gi|410966850|ref|XP_003989940.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 1 [Felis
catus]
Length = 301
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|354485865|ref|XP_003505102.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Cricetulus
griseus]
gi|344236478|gb|EGV92581.1| Peptidyl-prolyl cis-trans isomerase E [Cricetulus griseus]
Length = 301
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|158259649|dbj|BAF85783.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|149693777|ref|XP_001503512.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like isoform 1
[Equus caballus]
Length = 301
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|148238144|ref|NP_001091630.1| peptidyl-prolyl cis-trans isomerase E [Bos taurus]
gi|251823903|ref|NP_001156520.1| peptidyl-prolyl cis-trans isomerase E [Ovis aries]
gi|182676483|sp|A4FV72.1|PPIE_BOVIN RecName: Full=Peptidyl-prolyl cis-trans isomerase E; Short=PPIase
E; AltName: Full=Cyclophilin E; AltName: Full=Rotamase E
gi|133777612|gb|AAI23819.1| PPIE protein [Bos taurus]
gi|238799776|gb|ACR55760.1| peptidylprolyl isomerase E [Ovis aries]
Length = 301
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|296488946|tpg|DAA31059.1| TPA: peptidylprolyl isomerase E [Bos taurus]
Length = 301
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|281337315|gb|EFB12899.1| hypothetical protein PANDA_022213 [Ailuropoda melanoleuca]
Length = 231
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 9 FVPNDVVSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKET 68
+ P + R + + S + + G + G L E+V+++VL+ I G + D+ IP D ET
Sbjct: 99 WPPRVPLLRPRPAVRSPHGSQGGFEHAGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYET 158
Query: 69 DKPKGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSS 118
+K +GFAFVE+E E AI + L+ RT+R L+ + + SS
Sbjct: 159 EKHRGFAFVEFELAEDAAAAIDNMNE-SELFGRTIRVNLAKPMRIKEGSS 207
>gi|432095454|gb|ELK26650.1| Peptidyl-prolyl cis-trans isomerase E [Myotis davidii]
Length = 301
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|149023873|gb|EDL80370.1| peptidylprolyl isomerase E (cyclophilin E) [Rattus norvegicus]
gi|165970632|gb|AAI58561.1| Ppie protein [Rattus norvegicus]
Length = 301
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|5174637|ref|NP_006103.1| peptidyl-prolyl cis-trans isomerase E isoform 1 [Homo sapiens]
gi|332808526|ref|XP_001171465.2| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 8 [Pan
troglodytes]
gi|397488858|ref|XP_003815459.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Pan
paniscus]
gi|426329070|ref|XP_004025567.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 1 [Gorilla
gorilla gorilla]
gi|13124097|sp|Q9UNP9.1|PPIE_HUMAN RecName: Full=Peptidyl-prolyl cis-trans isomerase E; Short=PPIase
E; AltName: Full=Cyclophilin E; AltName:
Full=Cyclophilin-33; AltName: Full=Rotamase E
gi|4406227|gb|AAD19906.1| peptidyl-prolyl cis-trans isomerase E [Homo sapiens]
gi|13436167|gb|AAH04898.1| Peptidylprolyl isomerase E (cyclophilin E) [Homo sapiens]
gi|14250089|gb|AAH08451.1| Peptidylprolyl isomerase E (cyclophilin E) [Homo sapiens]
gi|78395107|gb|AAI07737.1| Peptidylprolyl isomerase E (cyclophilin E) [Homo sapiens]
gi|119627660|gb|EAX07255.1| peptidylprolyl isomerase E (cyclophilin E), isoform CRA_a [Homo
sapiens]
gi|189053911|dbj|BAG36418.1| unnamed protein product [Homo sapiens]
gi|312150756|gb|ADQ31890.1| peptidylprolyl isomerase E (cyclophilin E) [synthetic construct]
gi|410226048|gb|JAA10243.1| peptidylprolyl isomerase E (cyclophilin E) [Pan troglodytes]
gi|410268072|gb|JAA22002.1| peptidylprolyl isomerase E (cyclophilin E) [Pan troglodytes]
gi|410307918|gb|JAA32559.1| peptidylprolyl isomerase E (cyclophilin E) [Pan troglodytes]
Length = 301
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|395853060|ref|XP_003799038.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E [Otolemur
garnettii]
Length = 301
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|355713007|gb|AES04539.1| peptidylprolyl isomerase E [Mustela putorius furo]
Length = 301
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|149693768|ref|XP_001503477.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like isoform 1
[Equus caballus]
Length = 301
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|340914842|gb|EGS18183.1| hypothetical protein CTHT_0061980 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 392
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
N VY+GN+DE+ +L +++ Q G V +++P+D+ + +G+ FVE+++
Sbjct: 8 QNKDATVYVGNIDERFTHELLSELMTQVGPVRQVHMPQDRVSQTHQGYGFVEFDTPASAE 67
Query: 87 YAIKLFSGIVTLYNRTLRFALSGQDKN 113
YA K+ +GI ++ + +R + DK
Sbjct: 68 YAAKVLNGI-RIWGKPIRVNKASADKQ 93
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G ++I NLD V+E++LYD Q G ++ + RD E + KG+ FV ++S E A
Sbjct: 99 GAELFINNLDPLVDEKILYDTFSQFGTILRQPNVVRD-ENNISKGYGFVSFDSFEASDAA 157
Query: 89 IKLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTP 123
I +G L + T+ +A K TTTP
Sbjct: 158 IANMNGQYLLSKQITVEYAYKKDGKE------TTTP 187
>gi|440898130|gb|ELR49690.1| Peptidyl-prolyl cis-trans isomerase E, partial [Bos grunniens
mutus]
Length = 280
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|367025735|ref|XP_003662152.1| hypothetical protein MYCTH_2302391 [Myceliophthora thermophila ATCC
42464]
gi|347009420|gb|AEO56907.1| hypothetical protein MYCTH_2302391 [Myceliophthora thermophila ATCC
42464]
Length = 404
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N VY+GN+DE+ +L +++ Q G V +++P+D+ + +G+ FVE+++ Y
Sbjct: 8 NKDATVYVGNIDERFTHELLSELMTQVGPVRQVHMPQDRVSQTHQGYGFVEFDTPASAEY 67
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKN 113
A K+ +GI ++ + +R + DK
Sbjct: 68 ASKVLNGI-RIWGKPIRVNKASADKQ 92
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G ++I NLD +V+E++LYD Q G+++ + RD + + KG+ FV ++S E A
Sbjct: 98 GAELFINNLDPQVDEKILYDTFSQFGQILRQPNVVRD-DNNISKGYGFVSFDSFEASDAA 156
Query: 89 IKLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVP 135
I +G L T+ +A K ++ L++ + + VP
Sbjct: 157 IATMNGQYLLSKAITVEYAYKKDGKGERHGDEAERKLAAEGKKHNIVP 204
>gi|225711114|gb|ACO11403.1| Peptidyl-prolyl cis-trans isomerase E [Caligus rogercresseyi]
Length = 313
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 15/131 (11%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
NS +Y+G L E+V+E+VL I G + ++ +P D +T+K +GFAF+EYE
Sbjct: 4 GNSKKTLYVGGLAEEVDEKVLKGAFIPFGEITEVQVPIDYQTEKHRGFAFIEYEEPRDAA 63
Query: 87 YAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISHH 146
AI LY RTLR L+ PL ++S S PV ++ +
Sbjct: 64 AAIDNMHD-SELYGRTLRVNLA-------------KPLRLKESSSKPVWADDEWLQ-KYS 108
Query: 147 SMRISVPRHYS 157
IS P +S
Sbjct: 109 GQTISKPTEHS 119
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 11 PNDVVSRNKRQIMSGNSNS--GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKET 68
PN SR KR G++ S +++GNL +N+ L++ + G V ++ +P D+E+
Sbjct: 411 PNKDASREKRAKTFGDTTSPPSATLFVGNLSFGMNDDALWEAFSEHGEVKNVRLPTDRES 470
Query: 69 DKPKGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLRFALS 108
+PKGF +VE+ E A G V L R++R S
Sbjct: 471 GRPKGFGYVEFSDVETAKKAHAAMQG-VELDGRSVRLDFS 509
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 3 PSPKHSFVPNDVVSRNKRQIMSGNS----NSGCNVYIGNLDEKVNERVLYDILIQAGRVV 58
P K D V K +I +G++ N ++++G L V+ L + G VV
Sbjct: 301 PKGKRKADTQDAVPAKKVKIANGDAMDVDNEIKSIFVGRLSWNVDNDWLAKEFAECGEVV 360
Query: 59 DLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+ D+ T + +GF +V + + E AI+L
Sbjct: 361 SATVQMDRSTGRSRGFGYVHFSTSEAVEKAIEL 393
>gi|156717426|ref|NP_001096253.1| RNA binding motif protein 11 [Xenopus (Silurana) tropicalis]
gi|134025425|gb|AAI35424.1| LOC100124814 protein [Xenopus (Silurana) tropicalis]
Length = 243
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNLD VNE +LY++ +QAG + + I +DKE + K F FV ++ E YA L
Sbjct: 12 LFVGNLDCSVNEEILYELFLQAGPLTKVTIAKDKEGNS-KAFGFVCFKHSESVPYAKALL 70
Query: 93 SGIVTLYNRTLR 104
+GI LY R ++
Sbjct: 71 NGI-RLYGRPIK 81
>gi|440492608|gb|ELQ75160.1| mRNA cleavage and polyadenylation factor I complex, subunit RNA15
[Trachipleistophora hominis]
Length = 202
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 29 SGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
GC+V++GN+D V E L + L GRVV + D +T K KG+ F EYE++EI A
Sbjct: 3 KGCSVFVGNIDFDVPEEKLIEQLGTIGRVVSFRMVYDHKTKKSKGYGFCEYETKEIAQLA 62
Query: 89 IKLFSGIVTLYNRTLRFALSGQDKNAQNSS 118
+K + ++ NR ++ + D +N+S
Sbjct: 63 VKSLN--ISFNNRQVKINYAENDMKRKNNS 90
>gi|281204013|gb|EFA78209.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 252
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N + + +LD +V E +L++++IQA VV +++P+DK T + G A++E++SE Y
Sbjct: 10 NLDACIQVRDLDPQVTESLLWELMIQAAPVVKVFMPKDKLTQQHSGRAYIEFQSEADADY 69
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
+++ + V L+ R L+ +DK
Sbjct: 70 VMRIMN-YVKLFGRPLKLKKGNKDK 93
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD +V+E++L+D Q G ++ I RD + KGF FV Y++ A
Sbjct: 97 GANLFIGNLDGEVDEKLLHDTFCQFGTIIQPPKIMRDTSSGVSKGFGFVSYDNFTSSDMA 156
Query: 89 IKLFSG 94
I+ +G
Sbjct: 157 IEAMNG 162
>gi|221132804|ref|XP_002167622.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Hydra
magnipapillata]
Length = 161
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+YIG LD +ER L D+ + G VV + I +D+ET +P+GFAFVE++SEE AI
Sbjct: 7 LYIGQLDYNADERDLEDLFGKYGTVVKVSIIKDRETQRPRGFAFVEFDSEEDAEAAIDGC 66
Query: 93 SG 94
+G
Sbjct: 67 NG 68
>gi|432893900|ref|XP_004075908.1| PREDICTED: RNA-binding protein 7-like isoform 2 [Oryzias latipes]
Length = 238
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++I NLD KV E +L+++ +QAG +V IP+D + + K F FV Y+ E YA++L
Sbjct: 11 LFIRNLDSKVTEELLFELFLQAGPLVRTKIPKDTD-GRQKTFGFVVYKHEVSAPYAMQLL 69
Query: 93 SGIVTLYNRTLRFAL-SGQDK-----NAQNSSMTTTP 123
G +L+ R + SG N+QNSS TP
Sbjct: 70 DG-TSLFGRNIHVQFRSGSSHGSTPGNSQNSSPAITP 105
>gi|41351458|gb|AAH65641.1| Zgc:77304 protein [Danio rerio]
Length = 252
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNLD +V E V++++ +QAG ++ + IP+D E K K FAFV ++ E YA+ L
Sbjct: 11 LFVGNLDPQVTEEVIFELFLQAGPLIKVKIPKDNEG-KSKLFAFVNFKHEVSVPYALNLL 69
Query: 93 SGIVTLYNRTL 103
+GI L+ R L
Sbjct: 70 NGI-RLHGRQL 79
>gi|340371235|ref|XP_003384151.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Amphimedon
queenslandica]
Length = 306
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+VNE++L+ I G +VD+ IP D + K +GFAFVE+E+ E AI
Sbjct: 12 LYVGGLSEEVNEKILHSAFIPFGDIVDISIPLDYSSQKHRGFAFVEFEATEDAAAAIDNM 71
Query: 93 SGIVTLYNRTLRFALS 108
++ RT+R ++
Sbjct: 72 DN-SEIFGRTIRVNIA 86
>gi|225716982|gb|ACO14337.1| Peptidyl-prolyl cis-trans isomerase E [Esox lucius]
Length = 302
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+E+VL+ I G + D+ IP D ET+K +GFAF+E+E E AI
Sbjct: 8 LYVGGLTEEVDEKVLHAAFIPFGDITDIQIPIDYETEKHRGFAFIEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLR 104
+ L+ RT+R
Sbjct: 68 NE-SELFGRTIR 78
>gi|148236416|ref|NP_001090502.1| peptidylprolyl isomerase E (cyclophilin E) [Xenopus laevis]
gi|114107971|gb|AAI23372.1| MGC154898 protein [Xenopus laevis]
Length = 294
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+E++L+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 1 MYLGGLAEEVDEKILHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELPEDAAAAIDNM 60
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 61 NE-SELFGRTIRVNLA 75
>gi|449681524|ref|XP_002157695.2| PREDICTED: splicing factor 3B subunit 4-like [Hydra magnipapillata]
Length = 328
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD ++E++LYD G ++ I RD ET KGFAF
Sbjct: 44 NKASAHNKNLDVGANIFIGNLDPDIDEKLLYDTFSAFGVILTTPKIMRDPETGNSKGFAF 103
Query: 77 VEYESEEIGHYAIKLFSG 94
+ + S E AI +G
Sbjct: 104 INFASFEASDAAIDAMNG 121
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 62 IPRDKETDKPKGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLR 104
+P+D+ T +G+ F+E+ SEE YAIK+ + ++ +Y + +R
Sbjct: 1 MPKDRITQNHQGYGFIEFMSEEDADYAIKILN-MIKVYGKPIR 42
>gi|330799143|ref|XP_003287607.1| hypothetical protein DICPUDRAFT_151707 [Dictyostelium purpureum]
gi|325082393|gb|EGC35876.1| hypothetical protein DICPUDRAFT_151707 [Dictyostelium purpureum]
Length = 266
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N + + +LD V E +L ++ IQA VV ++IP+DK T + G A+VE++S Y
Sbjct: 10 NHDACLIVRDLDPMVTESLLMELFIQAAPVVKVFIPKDKLTQQHTGRAYVEFQSSADAEY 69
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A+K+ V L+N+ ++ DK
Sbjct: 70 ALKVMK-FVRLFNKEIKIKKESTDK 93
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 74/143 (51%), Gaps = 16/143 (11%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPR--DKETDKPKGFAFVEYESEEIGHY 87
G N++IGNLD V+ER+L+D + G + L+ P+ E + KGF F+ ++S +
Sbjct: 97 GANLFIGNLDTDVDERILFDTFSRFGTI--LFTPKIMRDENGQSKGFGFISFDSFDASDA 154
Query: 88 AIKLFSGIVTLYNRTLRFALS-GQDKNAQNSSMTTTPLSSRKS-----RSDPVPMPVNGM 141
AI+ +G L N+ + + + +D N ++ S +++ +S +S +P P
Sbjct: 155 AIESLNGQF-LCNKPISVSYARKKDSNEKHGSKAERIIAASRSAGGFNQSGAIPPP---- 209
Query: 142 EISHHSMRISVPRHYSSEEPPPP 164
++ + P +S+++PP P
Sbjct: 210 -LTAGGLMPPPPPSFSTQQPPLP 231
>gi|452823774|gb|EME30782.1| mRNA splicing factor, putative isoform 2 [Galdieria sulphuraria]
Length = 308
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 35 IGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLFSG 94
+GN+ +E L +IL Q G ++ + D+ET KPKG+AF EY E+ AI+ +G
Sbjct: 26 VGNIAYNTSEEQLQEILSQIGPILSFRVVYDRETGKPKGYAFCEYPDAEMALSAIRNLNG 85
Query: 95 IVTLYNRTLRFALSGQDK 112
L RTLR L+ DK
Sbjct: 86 -TELNGRTLRVDLADSDK 102
>gi|148234921|ref|NP_001084686.1| uncharacterized protein LOC414646 [Xenopus laevis]
gi|46249522|gb|AAH68729.1| MGC81187 protein [Xenopus laevis]
Length = 246
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNLD VNE +LY++ +QAG + + + +DKE + K F FV ++ E YA L
Sbjct: 12 LFVGNLDCSVNEEILYELFLQAGPLTKVTVAKDKEGNS-KAFGFVCFKHSESVPYAKALL 70
Query: 93 SGIVTLYNRTLR 104
+GI LY R ++
Sbjct: 71 NGI-RLYGRPIK 81
>gi|229366886|gb|ACQ58423.1| Peptidyl-prolyl cis-trans isomerase E [Anoplopoma fimbria]
Length = 302
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+E+VL+ I G + D+ IP D ET+K +GFAF+E+E E AI
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFIEFELGEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLR 104
+ L+ RT+R
Sbjct: 68 NE-SELFGRTIR 78
>gi|221119399|ref|XP_002162311.1| PREDICTED: uncharacterized protein LOC100198013 [Hydra
magnipapillata]
Length = 273
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
C V++ N++ +V E +L+++ +QAG + +++IP D+ + K K FAFV Y ++ +
Sbjct: 10 CTVFVSNIESRVTEELLWELFLQAGPLKNVHIPIDRSSGKSKTFAFVTYSDISAVAFSCE 69
Query: 91 LFSGIVTLYNRTL 103
LF+ + L+NR +
Sbjct: 70 LFN-TLKLFNRPI 81
>gi|289742363|gb|ADD19929.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase [Glossina
morsitans morsitans]
Length = 305
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
SN VYIG+L ++V E++L + I G + D+ IP D E+ K +GFAF+EYES E
Sbjct: 3 SNDKRTVYIGSLADEVTEKLLNNAFIPFGDIADIQIPVDYESQKHRGFAFIEYESAEDAA 62
Query: 87 YAIKLFSGIVTLYNRTLRFALS 108
AI + L RT+R L+
Sbjct: 63 SAIDNMND-SELCGRTIRVNLA 83
>gi|300193098|pdb|2KU7|A Chain A, Solution Structure Of Mll1 Phd3-Cyp33 Rrm Chimeric Protein
Length = 140
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 66 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 125
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 126 NE-SELFGRTIRVNLA 140
>gi|393903982|gb|EFO15894.2| cleavage stimulation factor [Loa loa]
Length = 337
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 12 NDVVSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKP 71
+ V+ + S S +V++GN+ +V E L + Q G VV L + D++T KP
Sbjct: 7 DSAVTSTTKTAPSATDRSARSVFVGNISYEVGEEQLKQVFAQVGPVVHLRLVHDRDTGKP 66
Query: 72 KGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLRF-ALSGQDKNA 114
KG+ F EY + AI+ +G L R LR + +G D++A
Sbjct: 67 KGYGFCEYNDAQTAESAIRNLNGF-ELNGRPLRVDSAAGGDRSA 109
>gi|312094880|ref|XP_003148175.1| cleavage stimulation factor [Loa loa]
Length = 334
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 12 NDVVSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKP 71
+ V+ + S S +V++GN+ +V E L + Q G VV L + D++T KP
Sbjct: 7 DSAVTSTTKTAPSATDRSARSVFVGNISYEVGEEQLKQVFAQVGPVVHLRLVHDRDTGKP 66
Query: 72 KGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLRF-ALSGQDKNA 114
KG+ F EY + AI+ +G L R LR + +G D++A
Sbjct: 67 KGYGFCEYNDAQTAESAIRNLNGF-ELNGRPLRVDSAAGGDRSA 109
>gi|62955333|ref|NP_001017678.1| peptidyl-prolyl cis-trans isomerase E [Danio rerio]
gi|62531317|gb|AAH93329.1| Peptidylprolyl isomerase E (cyclophilin E) [Danio rerio]
Length = 302
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+E+VL+ I G + D+ IP D ET+K +GFAF+E+E E AI
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFIEFELAEDSAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R ++
Sbjct: 68 NE-SELFGRTIRVNIA 82
>gi|182889546|gb|AAI65323.1| Ppie protein [Danio rerio]
Length = 302
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+E+VL+ I G + D+ IP D ET+K +GFAF+E+E E AI
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFIEFELAEDSAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R ++
Sbjct: 68 NE-SELFGRTIRVNIA 82
>gi|321479154|gb|EFX90110.1| hypothetical protein DAPPUDRAFT_299933 [Daphnia pulex]
Length = 381
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ V E L DI +AG VV I D+ET KPKG+ F EY +E A++
Sbjct: 15 SVFVGNIPYDVTEEKLKDIFSEAGPVVSFKIVYDRETGKPKGYGFCEYRDQETALCAMRN 74
Query: 92 FSGIVTLYNRTLRF 105
+G + RTLR
Sbjct: 75 LNGY-EIAGRTLRV 87
>gi|398396524|ref|XP_003851720.1| hypothetical protein MYCGRDRAFT_73484 [Zymoseptoria tritici IPO323]
gi|339471600|gb|EGP86696.1| hypothetical protein MYCGRDRAFT_73484 [Zymoseptoria tritici IPO323]
Length = 321
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
M+ G V+IGN+ V+E + DI + G+VV + DKET +PKGF F+EY
Sbjct: 1 MATREKGGRVVFIGNIPYDVSEEQIMDIFGRTGQVVGFRLVYDKETQQPKGFGFLEYTDA 60
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGME 142
+ A++ + L RTLR S ++ N+ + S+ P P
Sbjct: 61 DSAASAVRNLNDF-ELNGRTLRVDYSNDNRGTTNNK------DQNQEHSNRAPPP----- 108
Query: 143 ISHHSMRISVPRHYSSEEPPPPGVTL 168
+H +M S P + ++ PPG L
Sbjct: 109 -AHFNMNQSAPPNAAALPTLPPGTEL 133
>gi|237832541|ref|XP_002365568.1| peptidyl-prolyl cis-trans isomerase E, putative [Toxoplasma gondii
ME49]
gi|211963232|gb|EEA98427.1| peptidyl-prolyl cis-trans isomerase E, putative [Toxoplasma gondii
ME49]
gi|221488019|gb|EEE26233.1| dc50, putative [Toxoplasma gondii GT1]
gi|221508540|gb|EEE34109.1| fuse-binding protein-interacting repressor siahbp1, putative
[Toxoplasma gondii VEG]
Length = 145
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 10/124 (8%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V E VL + G + L IP+DK T +GF FVE+E E+ A++
Sbjct: 23 LYVGGLAEQVEEEVLRAAFLPFGDIKQLEIPKDKTTGLHRGFGFVEFEEEDDAKEAMENM 82
Query: 93 SGIVTLYNRTLRFALS---GQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISHHSMR 149
LY RTLR LS G ++N ++ + R+ M GM+IS
Sbjct: 83 DN-AELYGRTLRVNLSRSGGFAPGSRNKAIWSDDFFFRQE------MKKKGMDISEDMGD 135
Query: 150 ISVP 153
++ P
Sbjct: 136 VAEP 139
>gi|225703276|gb|ACO07484.1| Peptidyl-prolyl cis-trans isomerase E [Oncorhynchus mykiss]
Length = 302
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+E+VL+ I G V D IP D ET+K +GFAF+E+E E AI
Sbjct: 8 LYVGGLTEEVDEKVLHAAFIPFGDVTDTQIPIDYETEKHRGFAFIEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R ++
Sbjct: 68 NE-SELFGRTIRVNIA 82
>gi|347967477|ref|XP_307927.5| AGAP002256-PA [Anopheles gambiae str. PEST]
gi|333466277|gb|EAA03752.5| AGAP002256-PA [Anopheles gambiae str. PEST]
Length = 255
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++ GNL E+V E +LY++ +QAG V ++ IPRD + + + +AF+ + YA+ +F
Sbjct: 8 LWCGNLSERVTEEMLYELFLQAGPVENVKIPRDADR-RQRNYAFITFAHVCSVEYAMDIF 66
Query: 93 SGIVTLYNRTLRFALSGQDKNAQNSSMT 120
G TL+ RTL L +++N N + +
Sbjct: 67 EG-TTLFQRTL--TLHRKNRNGPNPAAS 91
>gi|348508380|ref|XP_003441732.1| PREDICTED: RNA-binding protein 7-like [Oreochromis niloticus]
Length = 265
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 8/97 (8%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V+I NLD KV E +L+++ +QAG +V IP+D + + K F F Y+ + YA++L
Sbjct: 11 VFIRNLDTKVTEELLFELFLQAGPLVKTKIPKDAD-GRQKTFGFAVYKHDVSVPYAVQLL 69
Query: 93 SGIVTLYNRTLRFAL-SGQDK-----NAQNSSMTTTP 123
+G + LY R + SG N+QN+S +TP
Sbjct: 70 NGTM-LYGRNIHVQFRSGSSHCSNPGNSQNTSPASTP 105
>gi|67623141|ref|XP_667853.1| splicing factor [Cryptosporidium hominis TU502]
gi|32399025|emb|CAD98265.1| splicing factor, probable [Cryptosporidium parvum]
gi|54659016|gb|EAL37616.1| splicing factor [Cryptosporidium hominis]
Length = 213
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y GNL+ KV+E +L ++ Q G V ++IPRDK T GF F+E+E Y
Sbjct: 17 NQEATLYCGNLENKVDEEMLAELFSQCGPVKSVHIPRDKVTGHHSGFGFIEFEFVSDVEY 76
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A K+ + I L+ + +R + D+
Sbjct: 77 AQKVMNSI-KLFTKQIRCCKASNDR 100
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYI-PRDKETDKPKGFAFVEYESEEIGHYA 88
G N+Y+GNL +++E+ L+ + G+++ L I D+ + PK AF+ + S + A
Sbjct: 106 GANLYVGNLSPEIDEKFLFYLFSNFGKILSLKIVGNDQSSQSPKNSAFINFSSFQESDSA 165
Query: 89 IKLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPV 134
I+ +G + ++ +A KN ++ + L S KS++ P+
Sbjct: 166 IQALNGQFFCNQQISVSYAFKQNSKNEKHGNYAERLLES-KSKTKPI 211
>gi|47210698|emb|CAF96067.1| unnamed protein product [Tetraodon nigroviridis]
Length = 223
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
++I NLD +V E +L+++ +QAG +V IP+D E + K F F Y+ E YA++L
Sbjct: 10 TLFIRNLDARVTEELLFELFLQAGPLVKTRIPKDPEGRQ-KSFGFAVYKHEVSVPYAMQL 68
Query: 92 FSGIVTLYNRTLRFAL---SGQDKNAQNS 117
G L+ R+L S NAQ S
Sbjct: 69 LDG-TPLFGRSLHVQFRSGSSHSSNAQKS 96
>gi|17508587|ref|NP_493023.1| Protein R09B3.3 [Caenorhabditis elegans]
gi|3879016|emb|CAB03237.1| Protein R09B3.3 [Caenorhabditis elegans]
Length = 85
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 29 SGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
SG +VY+GN + E L + QAG V ++ I D+ET +P+GFAFVE+ E A
Sbjct: 2 SGFSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRA 61
Query: 89 IKLFSGIVTLYNRTLRFALSGQDKN 113
+ F+G V R LR L+ Q++N
Sbjct: 62 VDQFNG-VDFNGRALRVNLA-QNRN 84
>gi|66475928|ref|XP_627780.1| U2 snRNP. Hsh49p, RRM domain containing protein [Cryptosporidium
parvum Iowa II]
gi|46229319|gb|EAK90168.1| U2 snRNP. Hsh49p, RRM domain containing protein [Cryptosporidium
parvum Iowa II]
Length = 216
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N +Y GNL+ KV+E +L ++ Q G V ++IPRDK T GF F+E+E Y
Sbjct: 20 NQEATLYCGNLENKVDEEMLAELFSQCGPVKSVHIPRDKVTGHHSGFGFIEFEFVSDVEY 79
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A K+ + I L+ + +R + D+
Sbjct: 80 AQKVMNSI-KLFTKQIRCCKASNDR 103
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYI-PRDKETDKPKGFAFVEYESEEIGHYA 88
G N+Y+GNL +++E+ L+ + G+++ L I D+ + PK AF+ + S + A
Sbjct: 109 GANLYVGNLSPEIDEKFLFYLFSNFGKILSLKIVGNDQSSQSPKNSAFINFSSFQESDSA 168
Query: 89 IKLFSGIVTLYNR-TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPV 134
I+ +G + ++ +A KN ++ + L S KS++ P+
Sbjct: 169 IQALNGQFFCNQQISVSYAFKQNSKNEKHGNYAERLLES-KSKTKPI 214
>gi|6007762|gb|AAF01030.1|AF182825_1 cyclophilin-33 [Mus musculus]
Length = 298
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 5 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAPAIDNM 64
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 65 NE-SELFGRTIRVNLA 79
>gi|383860928|ref|XP_003705939.1| PREDICTED: putative RNA-binding protein 11-like [Megachile
rotundata]
Length = 193
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V+ GNL EKV E +LY++ +Q G V + IP+D++ + + + F+ Y+ YA+ LF
Sbjct: 8 VWCGNLSEKVTEEILYELFLQGGPVQRVIIPKDRD-GRQRTYGFITYKHINSVKYALSLF 66
Query: 93 SGIVTLYNRTLRFALSGQDKNAQNSSMTTT 122
G + L+NR L + KN ++ +T T
Sbjct: 67 DGTI-LFNRPLSMSTK---KNTESPQITNT 92
>gi|47229364|emb|CAF99352.1| unnamed protein product [Tetraodon nigroviridis]
Length = 379
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 35/111 (31%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPK--------------- 72
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T + +
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGEQLFHTDNTEDACV 69
Query: 73 -------------------GFAFVEYESEEIGHYAIKLFSGIVTLYNRTLR 104
G+ FVE+ SEE YAIK+ + ++ LY + +R
Sbjct: 70 RFQKRLLYVNETNVHILFSGYGFVEFLSEEDADYAIKIMN-MIKLYGKPIR 119
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 121 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 180
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRS 131
+ + S + AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 181 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 236
>gi|195150527|ref|XP_002016202.1| GL11464 [Drosophila persimilis]
gi|194110049|gb|EDW32092.1| GL11464 [Drosophila persimilis]
Length = 302
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
SN VY+G L ++V ER+L + I G + D+ +P D E+ + +GFAF+EYE E
Sbjct: 2 SNDKRTVYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQRHRGFAFIEYEQAEDAA 61
Query: 87 YAIKLFSGIVTLYNRTLRFAL---------------SGQDKNAQNSSMTTTPLSSRKSRS 131
AI + L RT+R L + D +++ T P + ++
Sbjct: 62 SAIDNMND-SELCGRTIRVNLAKPVRVKEDSFKPVWADDDWLQKHAGATLEPAEAGEAEK 120
Query: 132 DPVPMPVNG 140
+PV P G
Sbjct: 121 EPVEAPSTG 129
>gi|301792689|ref|XP_002931311.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Ailuropoda
melanoleuca]
Length = 116
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|300708086|ref|XP_002996230.1| hypothetical protein NCER_100689 [Nosema ceranae BRL01]
gi|239605513|gb|EEQ82559.1| hypothetical protein NCER_100689 [Nosema ceranae BRL01]
Length = 211
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%)
Query: 29 SGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
SGC+V++GN+D +V L + L G+VVD + DK T+K KGF F EYES I A
Sbjct: 3 SGCSVFVGNIDFEVPVDKLIEELGAVGKVVDFKLMVDKNTNKSKGFGFCEYESPLIAEKA 62
Query: 89 IK 90
IK
Sbjct: 63 IK 64
>gi|67970111|dbj|BAE01400.1| unnamed protein product [Macaca fascicularis]
Length = 301
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET++ +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEEHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|432937500|ref|XP_004082430.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Oryzias
latipes]
Length = 302
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+E+VL+ I G + D+ IP D ET+K +GF F+E+E E AI
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFGFIEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R ++
Sbjct: 68 NE-SELFGRTIRVNIA 82
>gi|260787321|ref|XP_002588702.1| hypothetical protein BRAFLDRAFT_287419 [Branchiostoma floridae]
gi|229273870|gb|EEN44713.1| hypothetical protein BRAFLDRAFT_287419 [Branchiostoma floridae]
Length = 304
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+ + G L E+V+E+VL+ I G +VD+ IP D ET K +GFAFVE+E E AI
Sbjct: 2 HTFPGGLAEEVDEKVLHAAFIPFGDLVDINIPLDYETQKHRGFAFVEFEGAEDAAAAIDN 61
Query: 92 FSGIVTLYNRTLRFALS 108
L+ RT+R L+
Sbjct: 62 MH-ESELFGRTIRCNLA 77
>gi|254572433|ref|XP_002493326.1| hypothetical protein [Komagataella pastoris GS115]
gi|238033124|emb|CAY71147.1| hypothetical protein PAS_chr3_1252 [Komagataella pastoris GS115]
gi|328352657|emb|CCA39055.1| Polyadenylate-binding protein 1-B [Komagataella pastoris CBS 7435]
Length = 215
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N+ +Y+GNL +V+E+++Y++L+Q + L +P+D+ K G+ FVE ++ Y
Sbjct: 2 NNDITLYVGNLAPEVDEKIIYELLVQIAPIRKLKLPKDRVLRKHLGYCFVELDNPTSCEY 61
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMT 120
A KL +G+ +YNR ++ S DK QN +T
Sbjct: 62 AEKLLNGL-YIYNRPIKVKRSIVDK--QNKLIT 91
>gi|410909686|ref|XP_003968321.1| PREDICTED: RNA-binding protein 7-like [Takifugu rubripes]
Length = 253
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++I NLD +V E +L+++ +QAG +V IP+D + K K F F Y+ E YA++L
Sbjct: 11 LFIRNLDPRVTEELLFELFLQAGPLVRTRIPKDSDG-KQKSFGFAVYKHEVSVPYAMQLL 69
Query: 93 SGIVTLYNRTLRFAL---SGQDKNAQNSSMTTTPLSSRKS 129
GI LY R L S NAQ S + L +++
Sbjct: 70 DGI-PLYRRNLHVQFRSGSSHGNNAQKSPTDSLDLHGQRN 108
>gi|417409425|gb|JAA51218.1| Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase,
partial [Desmodus rotundus]
Length = 294
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 1 IYGGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 60
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 61 NE-SELFGRTIRVNLA 75
>gi|390341388|ref|XP_799104.3| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like
[Strongylocentrotus purpuratus]
Length = 313
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
Y+G L E+V E+ L+ I G ++D+ IP D ET+K +GFAFVE+E E +I
Sbjct: 10 AYVGGLAEEVTEKTLHAAFIPFGDIMDIQIPLDYETEKHRGFAFVEFEFAEDCAASIDNM 69
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 70 ND-SELFGRTIRVNLA 84
>gi|41053977|ref|NP_956219.1| RNA-binding protein 7 [Danio rerio]
gi|29436971|gb|AAH49507.1| Zgc:77304 [Danio rerio]
Length = 252
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNLD +V E V++++ +QAG ++ + IP++ E K K FAFV ++ E YA+ L
Sbjct: 11 LFVGNLDPQVTEEVIFELFLQAGPLIKVKIPKNNEG-KSKLFAFVNFKHEVSVPYALNLL 69
Query: 93 SGIVTLYNRTL 103
+GI L+ R L
Sbjct: 70 NGI-RLHGRQL 79
>gi|384245985|gb|EIE19477.1| hypothetical protein COCSUDRAFT_67908 [Coccomyxa subellipsoidea
C-169]
Length = 164
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
+N +Y+G L+E VNE +L+ I G + D+ IP D T K +GF FVEYE+ E
Sbjct: 13 TNKKTTLYVGGLEENVNEAILHSAFIPFGDIKDVNIPLDNTTGKHRGFGFVEYENAEDSA 72
Query: 87 YAIKLFSGIVTLYNRTLR 104
AI LY R LR
Sbjct: 73 DAIDNMHN-AELYGRVLR 89
>gi|295982539|pdb|3MDF|A Chain A, Crystal Structure Of The Rrm Domain Of Cyclophilin 33
gi|295982540|pdb|3MDF|B Chain B, Crystal Structure Of The Rrm Domain Of Cyclophilin 33
Length = 85
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 10 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 69
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 70 NE-SELFGRTIRVNLA 84
>gi|449665135|ref|XP_002159315.2| PREDICTED: cleavage stimulation factor subunit 2-like [Hydra
magnipapillata]
Length = 413
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 13 DVVSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPK 72
++ + +Q+ S +V++GN+ + ++ L DI QAG V+ + D+ET KPK
Sbjct: 8 EISAVKDQQMKEAAEKSARSVFVGNIPYEASDDQLKDIFSQAGPVLSFRLVYDRETGKPK 67
Query: 73 GFAFVEYESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDK 112
G+ F EY+ E A++ +G ++ R LR + K
Sbjct: 68 GYGFCEYKDSETAQSAMRNLNG-TEIHGRQLRVDSAASQK 106
>gi|304445488|pdb|2KYX|A Chain A, Solution Structure Of The Rrm Domain Of Cyp33
Length = 83
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|384247365|gb|EIE20852.1| hypothetical protein COCSUDRAFT_4708, partial [Coccomyxa
subellipsoidea C-169]
Length = 264
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+GNL VNE VL DI G V ++ I +D+ T G AFV++E + A+K
Sbjct: 7 LYVGNLHPYVNEAVLQDIFSTLGTVSEVRIVKDRATGNSAGSAFVKFEDHQAAAIALKTI 66
Query: 93 SGIVTLYNRTLRFALSGQDKNAQNSS 118
+G + LYN+ +R + Q + +N++
Sbjct: 67 NGRI-LYNKEVRIQWAFQKEKTENTA 91
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
N+ S ++++GNL V + VL G D + D T + KGF FV + ++E
Sbjct: 89 NTASHSHIFVGNLSGDVADPVLLQAFQHLGECSDARVMWDHSTGRSKGFGFVSFRTKEAA 148
Query: 86 HYAIKLFSG 94
A+ G
Sbjct: 149 EKALAEMDG 157
>gi|320582964|gb|EFW97181.1| RRM 1 multi-domain protein [Ogataea parapolymorpha DL-1]
Length = 981
Score = 56.2 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
++Y+GNLD KV+E +LY++ +Q V + +P+DK + +G+ FVE+ + + Y + +
Sbjct: 11 SLYLGNLDPKVDETLLYELFVQFAPVKSIRLPKDKVLRRHQGYGFVEFFNVKDCEYVLNI 70
Query: 92 FSGIVTLYNRTLR 104
SG+ +LY++ LR
Sbjct: 71 CSGL-SLYDKVLR 82
>gi|170063251|ref|XP_001867022.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167880929|gb|EDS44312.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 251
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++ GNL +KV E +LY++ +QAG V + IPRD E + + +AF+ Y YAI++F
Sbjct: 9 LWCGNLSDKVTEELLYELFVQAGPVQLVKIPRDNEK-RQRSYAFITYGHAASVEYAIEIF 67
Query: 93 SGIVTLYNRTLRFALSGQDKNAQN 116
G L+ R L L + KN N
Sbjct: 68 EG-TKLFQRPL--TLHKKSKNGPN 88
>gi|225713872|gb|ACO12782.1| Peptidyl-prolyl cis-trans isomerase E [Lepeophtheirus salmonis]
Length = 311
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 14/108 (12%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
+N+ +Y+G L E+V E+VL I G + ++ IP D +T+K +GFAF+EYE
Sbjct: 4 ANTKKTLYVGGLAEEVEEKVLKAAFIPFGEITEVQIPIDYQTEKHRGFAFIEYEEPRDAT 63
Query: 87 YAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPV 134
AI L+ RTLR L+ PL ++S S PV
Sbjct: 64 AAIDNMHD-SELFGRTLRVNLA-------------KPLRLKESSSKPV 97
>gi|402587151|gb|EJW81087.1| hypothetical protein WUBG_08006 [Wuchereria bancrofti]
Length = 334
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 12 NDVVSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKP 71
+ V+ + S S +V++GN+ +V E L + Q G VV L + D++T KP
Sbjct: 7 DSTVTSTTKTAPSTTDRSARSVFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKP 66
Query: 72 KGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLRF-ALSGQDKNA 114
KG+ F EY + AI+ +G L R LR + +G D++A
Sbjct: 67 KGYGFCEYNDAQTAESAIRNLNGF-ELNGRPLRVDSAAGGDRSA 109
>gi|167528145|ref|XP_001748125.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773543|gb|EDQ87182.1| predicted protein [Monosiga brevicollis MX1]
Length = 664
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGF 74
+R R + SG +Y+GN+D + + +L+++ +QAG V++ I + DK F
Sbjct: 212 AARPPRPTFRKVNRSGNTIYVGNIDPQCTDELLFELGLQAGPVLNAAIAGNPNGDK-LSF 270
Query: 75 AFVEYESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSM 119
F+EY+ +AI L G+ L+ RTL + A SM
Sbjct: 271 GFIEYKRATSTAFAIALLDGL-RLFGRTLNVKAGARRGVATGESM 314
>gi|328869602|gb|EGG17979.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 670
Score = 56.2 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 22/139 (15%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD +V+E++L+D IQ G ++ I RD T KGF FV Y++ +
Sbjct: 486 GANLFIGNLDAEVDEKILHDTFIQFGAIIQPPKIMRDTSTGVSKGFGFVSYDNFASSDAS 545
Query: 89 IKLFSGIVTLYNRTLRFALS-GQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISHHS 147
I+ +G L N+ + + +D ++ S +++ K R P+ GM
Sbjct: 546 IEAMNGEF-LCNKPISVTYARKKDSTEKHGSQAERMIAAGKQRGIPMFAQFGGM------ 598
Query: 148 MRISVPRHYSSEEPPPPGV 166
PPPPG+
Sbjct: 599 -------------PPPPGI 604
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+ + ++D +V E +L++++IQ VV +++P+DK T + G A+VE++SE YA+++
Sbjct: 401 IQVRDIDPQVTEALLWELMIQVAPVVKVFMPKDKLTQQHSGRAYVEFQSENDADYAMRIL 460
Query: 93 SGIVTLYNRTLRF 105
+ + L+ R ++
Sbjct: 461 N-YIKLFGRPIKL 472
>gi|170574206|ref|XP_001892710.1| cleavage stimulation factor [Brugia malayi]
gi|158601568|gb|EDP38456.1| cleavage stimulation factor, putative [Brugia malayi]
Length = 334
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Query: 12 NDVVSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKP 71
++ V+ + S S +V++GN+ +V E L + Q G VV L + D++T KP
Sbjct: 7 DNAVTCTTKTAPSTTDRSARSVFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKP 66
Query: 72 KGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLRF-ALSGQDKNA 114
KG+ F EY + AI+ +G L R LR + +G D++A
Sbjct: 67 KGYGFCEYNDSQTAESAIRNLNGF-ELNGRPLRVDSAAGGDRSA 109
>gi|308509216|ref|XP_003116791.1| CRE-EIF-3.G protein [Caenorhabditis remanei]
gi|308241705|gb|EFO85657.1| CRE-EIF-3.G protein [Caenorhabditis remanei]
Length = 260
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 17 RNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAF 76
++ RQI + C V NL +++NE L D+ + GRV+ ++I RDK T PKGFAF
Sbjct: 168 QDGRQIDRNRDENTCRVT--NLPQEMNEDELRDVFGRIGRVIRIFIARDKITGLPKGFAF 225
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNRTLRFALS 108
V +ES + AI + I +Y+ L+ +
Sbjct: 226 VTFESRDDAARAIAELNDI-RMYHMVLKVEWT 256
>gi|300193226|pdb|3LPY|A Chain A, Crystal Structure Of The Rrm Domain Of Cyp33
gi|300193227|pdb|3LPY|B Chain B, Crystal Structure Of The Rrm Domain Of Cyp33
Length = 79
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI
Sbjct: 5 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 64
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 65 NE-SELFGRTIRVNLA 79
>gi|194853227|ref|XP_001968127.1| GG24699 [Drosophila erecta]
gi|190659994|gb|EDV57186.1| GG24699 [Drosophila erecta]
Length = 238
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++ GNLDE+V E +LY++ +QAG + + IP D +P+ F FV Y+ +A+ L+
Sbjct: 71 LFCGNLDERVTEEILYEVFLQAGPIEGVRIPTDN-NGRPRNFGFVTYQRLCAVPFAMDLY 129
Query: 93 SGIVTLYNRTLRFALSGQDKNAQNSSMTTTPL 124
G+ + G+ A N S P
Sbjct: 130 QGLELFQKKVTIKQQGGKQLPAFNQSRLRNPF 161
>gi|449268619|gb|EMC79473.1| Peptidyl-prolyl cis-trans isomerase E, partial [Columba livia]
Length = 291
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 36 GNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLFSGI 95
G L E+V+E+VL+ I G + D+ IP D ET+K +GFAFVE+E E AI +
Sbjct: 1 GGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNE- 59
Query: 96 VTLYNRTLRFALS 108
L+ RT+R L+
Sbjct: 60 SELFGRTIRVNLA 72
>gi|195114022|ref|XP_002001566.1| GI16471 [Drosophila mojavensis]
gi|193912141|gb|EDW11008.1| GI16471 [Drosophila mojavensis]
Length = 252
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++ NLDE+V E +LY++ +QAG + IP D T + + F FV Y+ + YA++L+
Sbjct: 74 LFCSNLDERVTEEILYEVFLQAGPIESARIPLDN-TGRQRNFGFVTYQHKIAVPYAVELY 132
Query: 93 SGIVTLYNRTLRFALSGQDK---NAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISHHSMR 149
G+ L+ + L +K +A T P S + S P P PVN +R
Sbjct: 133 QGL-ELFQKKLIIRQQCPEKPKLSAMGQGRTRNPFS--QDFSSPAP-PVNEQSGGQRHVR 188
Query: 150 ISV 152
S+
Sbjct: 189 HSI 191
>gi|226484710|emb|CAX74264.1| ATP-binding protein involved in chromosome partitioning
[Schistosoma japonicum]
gi|226484712|emb|CAX74265.1| ATP-binding protein involved in chromosome partitioning
[Schistosoma japonicum]
Length = 225
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 9/71 (12%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+YIGN++ K+ +LY++ +QAG + D+ + K+T FAFV +E EE YA LF
Sbjct: 7 LYIGNINSKITTELLYELFLQAGPLEDVTV---KDT-----FAFVTFEDEESVPYACSLF 58
Query: 93 SGIVTLYNRTL 103
GI TLY R L
Sbjct: 59 EGI-TLYGREL 68
>gi|156102134|ref|XP_001616760.1| spliceosome-associated protein 49 [Plasmodium vivax Sal-1]
gi|148805634|gb|EDL47033.1| spliceosome-associated protein 49, putative [Plasmodium vivax]
Length = 479
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N+ +YI NLD +V+E +L ++ +Q G V +++IPRDK G+ FVEYE E Y
Sbjct: 17 NNEATLYIANLDAQVDEEILCELFMQCGNVKNVHIPRDKINGFHAGYGFVEYEYEYECEY 76
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A K+ + + L+ + LR + QDK
Sbjct: 77 AGKVLN-MTKLFGKPLRCNKASQDK 100
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G N++IGNLD +V+E++L+DI G++V + I RD E D KG F+ Y++ E AI
Sbjct: 106 GANLFIGNLDAEVDEKMLFDIFSSFGQLVTVRIIRD-ENDTSKGHGFISYDNFESSDMAI 164
Query: 90 K 90
+
Sbjct: 165 E 165
>gi|238883601|gb|EEQ47239.1| hypothetical protein CAWG_05803 [Candida albicans WO-1]
Length = 259
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 20 RQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY 79
R+ + + N ++Y GN+D +V E ++Y++ IQ G V + +P+D+ +G+ FVE+
Sbjct: 6 RKRLDSDRNIDASLYFGNIDPQVTELLMYELFIQFGPVKSINMPKDRILKTHQGYGFVEF 65
Query: 80 ESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSS 118
++ Y +++ GI LY + L+ L D +Q+S+
Sbjct: 66 KNSADAKYTMEILRGI-RLYGKALK--LKRIDAKSQSST 101
>gi|156540750|ref|XP_001599717.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like, partial
[Nasonia vitripennis]
Length = 247
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 36 GNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLFSGI 95
G L E+V+E++L I G +VD+ IP D E++K +GFAF+E+E+ E AI +
Sbjct: 1 GGLAEEVDEKILNAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFEAAEDAASAIDNMND- 59
Query: 96 VTLYNRTLRFALSGQDKNAQNSS 118
L+ RT+R ++ K + SS
Sbjct: 60 SELFGRTIRVNIAKPQKIKEGSS 82
>gi|157138134|ref|XP_001664142.1| peptidyl-prolyl cis-trans isomerase e, ppie [Aedes aegypti]
gi|108869557|gb|EAT33782.1| AAEL013948-PA [Aedes aegypti]
Length = 304
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
SN VY+G L ++V E+++ D I G +VD+ +P D E+ K +GFAF+E+ES E
Sbjct: 2 SNDKRTVYVGGLSDEVTEKLINDAFIPFGDLVDIQMPVDYESQKHRGFAFIEFESAEDAA 61
Query: 87 YAIKLFSGIVTLYNRTLRFALS 108
A+ + L RT+R ++
Sbjct: 62 AAVDNMND-SELCGRTIRVNIA 82
>gi|312370863|gb|EFR19173.1| hypothetical protein AND_22952 [Anopheles darlingi]
Length = 259
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
SN VYIG L E+V ++++ D I G +VD+ +P D E+ K +GFAF+E+E+ E
Sbjct: 2 SNDKRTVYIGGLSEEVTDKLITDAFIPFGDLVDIQMPIDYESQKHRGFAFIEFENAEDAA 61
Query: 87 YAIKLFSGIVTLYNRTLR 104
A+ + L RT+R
Sbjct: 62 AAVDNMND-SELCGRTIR 78
>gi|209155164|gb|ACI33814.1| RNA-binding protein 7 [Salmo salar]
Length = 93
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNLD KV E +L+++ +QAG + + IP+D + K K F FV ++ E Y + L
Sbjct: 11 LFVGNLDPKVTEELLFELFLQAGPMFKVKIPKDND-GKQKAFGFVCFKHEVSVPYGMNLL 69
Query: 93 SGIVTLYNRTLR 104
+G TL+ RTL+
Sbjct: 70 NG-ATLFGRTLK 80
>gi|7270986|emb|CAB77630.1| spliceosome-associated essential protein [Candida albicans]
Length = 257
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 20 RQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY 79
R+ + + N ++Y GN+D +V E ++Y++ IQ G V + +P+D+ +G+ FVE+
Sbjct: 4 RKRLDSDRNIDASLYFGNIDPQVTELLMYELFIQFGPVKSINMPKDRILKTHQGYGFVEF 63
Query: 80 ESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSS 118
++ Y +++ GI LY + L+ L D +Q+S+
Sbjct: 64 KNSADAKYTMEILRGI-RLYGKALK--LKRIDAKSQSST 99
>gi|68482438|ref|XP_714851.1| likely U2-associated splicing factor [Candida albicans SC5314]
gi|68482559|ref|XP_714789.1| likely U2-associated splicing factor [Candida albicans SC5314]
gi|46436383|gb|EAK95746.1| likely U2-associated splicing factor [Candida albicans SC5314]
gi|46436448|gb|EAK95810.1| likely U2-associated splicing factor [Candida albicans SC5314]
Length = 259
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 20 RQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY 79
R+ + + N ++Y GN+D +V E ++Y++ IQ G V + +P+D+ +G+ FVE+
Sbjct: 6 RKRLDSDRNIDASLYFGNIDPQVTELLMYELFIQFGPVKSINMPKDRILKTHQGYGFVEF 65
Query: 80 ESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSS 118
++ Y +++ GI LY + L+ L D +Q+S+
Sbjct: 66 KNSADAKYTMEILRGI-RLYGKALK--LKRIDAKSQSST 101
>gi|67540172|ref|XP_663860.1| hypothetical protein AN6256.2 [Aspergillus nidulans FGSC A4]
gi|40739450|gb|EAA58640.1| hypothetical protein AN6256.2 [Aspergillus nidulans FGSC A4]
gi|259479533|tpe|CBF69842.1| TPA: peptidyl prolyl cis-trans isomerase Cyclophilin, putative
(AFU_orthologue; AFUA_2G12990) [Aspergillus nidulans
FGSC A4]
Length = 153
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDK---ETDKPKGFAFVEY 79
MS + C VY+G LD+ V+ + L + + G VVD+ +P+ D +GF +VE+
Sbjct: 1 MSEKTRLKCTVYVGGLDQAVSVQTLAEAFVPFGEVVDITLPKPDLPNSNDNHRGFGYVEF 60
Query: 80 ESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRK 128
+S E AI G LY RT++ A + K+A + T + ++
Sbjct: 61 DSPEDAKEAIDNMDG-SELYGRTIKVAPAKPQKDANEGLGSKTAIWEQE 108
>gi|322785970|gb|EFZ12586.1| hypothetical protein SINV_05042 [Solenopsis invicta]
Length = 375
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK N + G N++IGNLD +V+E++LYD G ++ I RD ET KGFAF
Sbjct: 48 NKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAF 107
Query: 77 VEYESEEIGHYAIKLFSG 94
+ + S + +I+ +G
Sbjct: 108 INFASFDASDASIEAMNG 125
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 58 VDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLR 104
V++++P+D+ T +G+ FVE+ EE YAIK+ + ++ LY + +R
Sbjct: 1 VNVHMPKDRVTQMHQGYGFVEFMGEEDADYAIKIMN-MIKLYGKPIR 46
>gi|219111683|ref|XP_002177593.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410478|gb|EEC50407.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 125
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
VY+GNLD + E + +L Q G + DL++ R+++T K +GFAF +YE A+ F
Sbjct: 36 VYVGNLDHALTEGDVICVLSQYGEIEDLHLVREEDTGKSRGFAFCKYEDARSCVLAVDNF 95
Query: 93 SGIVTLYNRTLR 104
+GI L R+LR
Sbjct: 96 TGI-ELCGRSLR 106
>gi|299748212|ref|XP_001837545.2| RNA-binding protein Cwf29 [Coprinopsis cinerea okayama7#130]
gi|298407867|gb|EAU84461.2| RNA-binding protein Cwf29 [Coprinopsis cinerea okayama7#130]
Length = 321
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++G L + E + I Q G ++D+ +PRDKET KP+GFAF+ YE + A+
Sbjct: 33 IFVGGLHNDLTEGDVITIFSQYGEIMDINMPRDKETGKPRGFAFLMYEDQRSTILAVDNL 92
Query: 93 SGIVTLYNRTLR 104
+G L RTLR
Sbjct: 93 NGAKVL-ERTLR 103
>gi|195487862|ref|XP_002092072.1| GE11871 [Drosophila yakuba]
gi|194178173|gb|EDW91784.1| GE11871 [Drosophila yakuba]
Length = 300
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
VY+G L ++V ER+L + I G + D+ +P D E+ + +GFAF+EYE E AI
Sbjct: 8 VYVGGLADEVTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L RT+R L+
Sbjct: 68 ND-SELCGRTIRVNLA 82
>gi|157115630|ref|XP_001658271.1| peptidyl-prolyl cis-trans isomerase e, ppie [Aedes aegypti]
gi|108876827|gb|EAT41052.1| AAEL007273-PA [Aedes aegypti]
Length = 303
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
SN VY+G L ++V E+++ D I G +VD+ +P D E+ K +GFAF+E+ES E
Sbjct: 2 SNDKRTVYVGGLSDEVTEKLINDAFIPFGDLVDIQMPVDYESQKHRGFAFIEFESAEDAA 61
Query: 87 YAI 89
A+
Sbjct: 62 AAV 64
>gi|125986686|ref|XP_001357106.1| GA11013 [Drosophila pseudoobscura pseudoobscura]
gi|54645433|gb|EAL34172.1| GA11013 [Drosophila pseudoobscura pseudoobscura]
Length = 238
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++ GNLD++V E +LY++ +QAG + + IP D T + + F FV Y+ +A++L+
Sbjct: 62 LFCGNLDQRVTEEILYEVFVQAGPIEGVRIPSDN-TGRQRNFGFVIYQRISAVPFALELY 120
Query: 93 SGIVTLYNRTLRFALSGQDK 112
G+ L+ + + G DK
Sbjct: 121 QGL-ELFQKKVTIKQQGADK 139
>gi|392577429|gb|EIW70558.1| hypothetical protein TREMEDRAFT_71330 [Tremella mesenterica DSM
1558]
Length = 331
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%), Gaps = 5/87 (5%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
+ N VY+GNLDEK + +++++++ ++++P+D+ + +GF F E+ +EE
Sbjct: 10 DRNQEATVYLGNLDEKCTDALIWELMLS----TNVFLPKDRISMNHQGFGFCEFLTEEDS 65
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDK 112
YA+K+ + I LY + +R + DK
Sbjct: 66 EYAVKIMNQI-KLYGKPIRVNKASYDK 91
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 7/118 (5%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVD-LYIPRDKETDKPKG 73
S +K+Q+ + G N++IGNLD V+E LYD G + + I RD T + KG
Sbjct: 87 ASYDKKQL-----DIGANLFIGNLDLNVDENALYDTFATFGSIAEHPKISRDPTTGQSKG 141
Query: 74 FAFVEYESEEIGHYAIKLFSG-IVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSR 130
+ FV Y + AI+ +G T+++A K ++ S L+++ +
Sbjct: 142 YGFVSYHDFDAADMAIENMNGQFFGGQQITVQYAFKKDGKGERHGSAAERLLAAQAKK 199
>gi|17647301|ref|NP_523773.1| cyclophilin-33 [Drosophila melanogaster]
gi|13124101|sp|Q9V3G3.1|PPIE_DROME RecName: Full=Peptidyl-prolyl cis-trans isomerase E; Short=PPIase
E; AltName: Full=Cyclophilin 33; AltName:
Full=Cyclophilin E; AltName: Full=Rotamase E
gi|6007764|gb|AAF01031.1|AF182826_1 cyclophilin-33 [Drosophila melanogaster]
gi|7302761|gb|AAF57839.1| cyclophilin-33 [Drosophila melanogaster]
gi|16769500|gb|AAL28969.1| LD35248p [Drosophila melanogaster]
gi|220954214|gb|ACL89650.1| cyp33-PA [synthetic construct]
Length = 300
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
SN +Y+G L ++V ER+L + I G + D+ +P D E+ + +GFAF+EYE E
Sbjct: 2 SNDKRTIYVGGLADEVTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAA 61
Query: 87 YAIKLFSGIVTLYNRTLRFALS 108
AI + L RT+R L+
Sbjct: 62 AAIDNMND-SELCGRTIRVNLA 82
>gi|195584258|ref|XP_002081931.1| GD11288 [Drosophila simulans]
gi|194193940|gb|EDX07516.1| GD11288 [Drosophila simulans]
Length = 301
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
SN +Y+G L ++V ER+L + I G + D+ +P D E+ + +GFAF+EYE E
Sbjct: 2 SNDKRTIYVGGLADEVTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAA 61
Query: 87 YAIKLFSGIVTLYNRTLRFALS 108
AI + L RT+R L+
Sbjct: 62 AAIDNMND-SELCGRTIRVNLA 82
>gi|195025318|ref|XP_001986035.1| GH20760 [Drosophila grimshawi]
gi|193902035|gb|EDW00902.1| GH20760 [Drosophila grimshawi]
Length = 304
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
SN VY+G L ++V ER+L + I G + D+ +P D E+ K +GFAF+EYE+ E
Sbjct: 2 SNDKRTVYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQKHRGFAFIEYENYEDAA 61
Query: 87 YAIKLFSGIVTLYNRTLRFALS 108
AI + L RT+R L+
Sbjct: 62 SAIDNMND-SELCGRTIRVNLA 82
>gi|413934108|gb|AFW68659.1| hypothetical protein ZEAMMB73_687460 [Zea mays]
Length = 270
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
G N++IGNLD V+E++LYD G +V + I RD ET +GF FV YES E A
Sbjct: 24 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQA 83
Query: 89 IK 90
I+
Sbjct: 84 IE 85
>gi|195160160|ref|XP_002020944.1| GL13956 [Drosophila persimilis]
gi|194117894|gb|EDW39937.1| GL13956 [Drosophila persimilis]
Length = 238
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++ GNLD++V E +LY++ +QAG + + IP D T + + F FV Y+ +A++L+
Sbjct: 62 LFCGNLDQRVTEEILYEVFVQAGPIEGVRIPSDN-TGRQRNFGFVIYQRISAVPFALELY 120
Query: 93 SGIVTLYNRTLRFALSGQDK 112
G+ L+ + + G DK
Sbjct: 121 QGL-ELFQKKVTIKQQGADK 139
>gi|195123191|ref|XP_002006092.1| GI20843 [Drosophila mojavensis]
gi|193911160|gb|EDW10027.1| GI20843 [Drosophila mojavensis]
Length = 303
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
SN VY+G L ++V ER+L + I G + D+ +P D E+ K +GFAF+EYE+ E
Sbjct: 2 SNDKRTVYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQKHRGFAFIEYENYEDAA 61
Query: 87 YAIKLFSGIVTLYNRTLRFALS 108
AI + L RT+R L+
Sbjct: 62 SAIDNMND-SELCGRTIRVNLA 82
>gi|380016422|ref|XP_003692184.1| PREDICTED: putative RNA-binding protein 11-like [Apis florea]
Length = 186
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++ GNL EKV E +LY++ +Q G V + IP+D++ K + + FV Y+ YA++LF
Sbjct: 8 LWCGNLSEKVTEEILYELFLQGGPVQRVTIPKDRDG-KQRTYGFVTYKHINSVLYALELF 66
Query: 93 SGIVTLYNRTLRFA 106
G +L+NR L +
Sbjct: 67 DG-TSLFNRPLNMS 79
>gi|194880756|ref|XP_001974528.1| GG21795 [Drosophila erecta]
gi|190657715|gb|EDV54928.1| GG21795 [Drosophila erecta]
Length = 300
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
VY+G L ++V ER+L + I G + D+ +P D E+ + +GFAF+EYE E AI
Sbjct: 8 VYVGGLADEVTERLLNNAFIPFGDIADIQMPADFESQRHRGFAFIEYEQSEDAAAAIDNM 67
Query: 93 SGIVTLYNRTLRFALS 108
+ L RT+R L+
Sbjct: 68 ND-SELCGRTIRVNLA 82
>gi|158298753|ref|XP_318916.3| AGAP009810-PA [Anopheles gambiae str. PEST]
gi|157014037|gb|EAA14200.3| AGAP009810-PA [Anopheles gambiae str. PEST]
Length = 306
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
VY+G L E+V E+++ D I G +VD+ +P D E+ K +GFAF+E+E+ E A+
Sbjct: 8 VYVGGLSEEVTEKLITDAFIPFGDLVDIQMPIDYESQKHRGFAFIEFENAEDAAAAVDNM 67
Query: 93 SGIVTLYNRTLR 104
+ L RT+R
Sbjct: 68 ND-SELCGRTIR 78
>gi|167521049|ref|XP_001744863.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776477|gb|EDQ90096.1| predicted protein [Monosiga brevicollis MX1]
Length = 307
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V E VL D + G +++L +P D +T KGFAF+EY + E AI
Sbjct: 10 LYVGGLAEEVTEEVLRDAFVPFGDILELQLPLDFQTQDHKGFAFIEYATLEDAEAAIDNM 69
Query: 93 SGIVTLYNRTLR 104
LY RTLR
Sbjct: 70 HE-SELYGRTLR 80
>gi|195382061|ref|XP_002049750.1| GJ20579 [Drosophila virilis]
gi|194144547|gb|EDW60943.1| GJ20579 [Drosophila virilis]
Length = 302
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
SN VY+G L ++V ER+L + I G + D+ +P D E+ K +GFAF+EYE+ E
Sbjct: 2 SNDKRTVYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQKHRGFAFIEYENYEDAA 61
Query: 87 YAIKLFSGIVTLYNRTLRFALS 108
AI + L RT+R L+
Sbjct: 62 SAIDNMND-SELCGRTIRVNLA 82
>gi|26351239|dbj|BAC39256.1| unnamed protein product [Mus musculus]
Length = 642
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQ 115
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|393236038|gb|EJD43589.1| hypothetical protein AURDEDRAFT_185479 [Auricularia delicata
TFB-10046 SS5]
Length = 281
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 9/102 (8%)
Query: 12 NDVVSR-NKRQIMSGNSNSGCN-------VYIGNLDEKVNERVLYDILIQAGRVVDLYIP 63
N V+R N+R++ G S S + VYIGNL + E + I+ Q G V+D+ +P
Sbjct: 2 NKEVARINERELQLGVSGSWHDQYKDSAYVYIGNLPRDLTEGDVITIMSQYGEVMDVNLP 61
Query: 64 RDKETDKPKGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLRF 105
RDK+T K +GF F+ YE + A+ +G L +RT+R
Sbjct: 62 RDKQTGKIRGFGFLMYEDQRSTVLAVDNLNGAKVL-DRTIRV 102
>gi|195575453|ref|XP_002077592.1| GD23003 [Drosophila simulans]
gi|194189601|gb|EDX03177.1| GD23003 [Drosophila simulans]
Length = 238
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y GNLDE+V E +LY++ +QAG + + IP D +P+ F FV Y+ +A+ L+
Sbjct: 73 LYCGNLDERVTEEILYEVFLQAGPIEGVRIPTDN-NGRPRNFGFVTYQRLCAVPFALDLY 131
Query: 93 SGIVTLYNRTLRFALSG 109
G+ L+ + + G
Sbjct: 132 QGL-ELFQKKVTIKQQG 147
>gi|395329951|gb|EJF62336.1| hypothetical protein DICSQDRAFT_104771 [Dichomitus squalens
LYAD-421 SS1]
Length = 311
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 20/125 (16%)
Query: 18 NKRQIMSGNSNSGCN-------VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDK 70
N+R++ G S S + +++G L + E + I Q G ++D+ +PRDKET K
Sbjct: 11 NERELDLGISGSWHDDYKDSAYIFVGGLHRDLTEGDVITIFSQYGEIMDINLPRDKETGK 70
Query: 71 PKGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLRF------------ALSGQDKNAQNSS 118
KGFAF+ YE + A+ +G L +RTLR G+ K A+ S
Sbjct: 71 QKGFAFLMYEDQRSTILAVDNLNGAQVL-DRTLRVDHVKNYKQPKAKGEDGEWKEAEEQS 129
Query: 119 MTTTP 123
+ P
Sbjct: 130 LNAKP 134
>gi|195430772|ref|XP_002063422.1| GK21899 [Drosophila willistoni]
gi|194159507|gb|EDW74408.1| GK21899 [Drosophila willistoni]
Length = 223
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
SN VY+G L ++V ER+L + I G + D+ +P D E+ K +GFAF+EYE E
Sbjct: 2 SNDKRTVYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQKHRGFAFIEYEQFEDAA 61
Query: 87 YAIKLFSGIVTLYNRTLRFALS 108
AI + L RT+R L+
Sbjct: 62 SAIDNMND-SELCGRTIRVNLA 82
>gi|170594273|ref|XP_001901888.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase-13, Bmcyp-13
[Brugia malayi]
gi|158590832|gb|EDP29447.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase-13, Bmcyp-13
[Brugia malayi]
Length = 316
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G E+VNE++L I G +V + IP D ET K +GF FVEYE E AI
Sbjct: 15 LYVGGFGEEVNEKILQAGFIPFGEIVSISIPLDYETGKHRGFGFVEYELAEDAAAAIDNM 74
Query: 93 SGIVTLYNRTLR 104
+ L+ RT+R
Sbjct: 75 ND-SELFGRTIR 85
>gi|302696573|ref|XP_003037965.1| hypothetical protein SCHCODRAFT_63222 [Schizophyllum commune H4-8]
gi|300111662|gb|EFJ03063.1| hypothetical protein SCHCODRAFT_63222 [Schizophyllum commune H4-8]
Length = 309
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++G L+ ++ E + I Q G ++D+ +PR+KET KPKGFAFV YE + A+
Sbjct: 34 IFVGGLNRELTEGDVITIFSQYGEIMDINMPREKETGKPKGFAFVMYEDQRSTVLAVDNL 93
Query: 93 SGIVTLYNRTLR 104
+G + RTLR
Sbjct: 94 NG-SKVAERTLR 104
>gi|392568432|gb|EIW61606.1| hypothetical protein TRAVEDRAFT_69926 [Trametes versicolor
FP-101664 SS1]
Length = 333
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++ G L+ ++ E + I Q G ++D+ +PRDKET KPKGFAFV YE + A+
Sbjct: 33 IFAGGLNTELTEGDVITIFSQYGEIMDVNMPRDKETGKPKGFAFVMYEDQRSTVLAVDNL 92
Query: 93 SGIVTLYNRTLRF 105
+G L RT+R
Sbjct: 93 NGAKIL-ERTIRV 104
>gi|47225344|emb|CAG09844.1| unnamed protein product [Tetraodon nigroviridis]
Length = 570
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 27 SVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 86
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQ 115
+G R LR + +KN +
Sbjct: 87 LNG-REFSGRALRVDNAASEKNKE 109
>gi|328783380|ref|XP_394069.4| PREDICTED: putative RNA-binding protein 11-like isoform 1 [Apis
mellifera]
Length = 186
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++ GNL EKV E +LY++ +Q G V + IP+D++ K + + FV Y+ YA++LF
Sbjct: 8 LWCGNLSEKVTEEILYELFLQGGPVQRVTIPKDRDG-KQRTYGFVTYKHINSVLYALELF 66
Query: 93 SGIVTLYNRTLRFA 106
G +L+NR L +
Sbjct: 67 DG-TSLFNRPLNMS 79
>gi|125808073|ref|XP_001360625.1| GA18502 [Drosophila pseudoobscura pseudoobscura]
gi|54635797|gb|EAL25200.1| GA18502 [Drosophila pseudoobscura pseudoobscura]
Length = 302
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
SN VY+G L ++V ER+L + I G + D+ +P D E+ + +GFAF+EYE E
Sbjct: 2 SNDKRTVYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQRHRGFAFIEYEQAEDAA 61
Query: 87 YAIKLFSGIVTLYNRTLRFALS 108
AI + L RT+R L+
Sbjct: 62 SAIDNMND-SELCGRTIRVNLA 82
>gi|291228918|ref|XP_002734426.1| PREDICTED: cleavage stimulation factor subunit 2-like [Saccoglossus
kowalevskii]
Length = 220
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 16 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMRN 75
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
SG L R LR + +KN +
Sbjct: 76 LSG-YELNGRQLRVDNAASEKNKEE 99
>gi|324515203|gb|ADY46121.1| Eukaryotic translation initiation factor 3 subunit G [Ascaris suum]
Length = 285
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 35 IGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLFSG 94
+ NL E+ +E L + Q G+V ++I +DK T+KPKGFAFV YE E AI+ +G
Sbjct: 209 VTNLPEECDEMELRGLFTQIGQVSRVFIAKDKHTNKPKGFAFVTYEHREHAEMAIQKLNG 268
>gi|312066701|ref|XP_003136395.1| cytosolic cyclophilin [Loa loa]
gi|307768442|gb|EFO27676.1| cytosolic cyclophilin [Loa loa]
Length = 322
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G E+VNE+VL + G +V + IP D ET K +GF FVEYE E AI
Sbjct: 15 LYVGGFGEEVNEKVLQAGFVPFGEIVSISIPLDYETGKHRGFGFVEYELAEDAAAAIDNM 74
Query: 93 SGIVTLYNRTLR 104
+ L+ RT+R
Sbjct: 75 ND-SELFGRTIR 85
>gi|193582455|ref|XP_001947710.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like
[Acyrthosiphon pisum]
Length = 298
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
VY+G L E+V+++VL I G +VD+ +P D E++K +GFAFVE+E E +I
Sbjct: 15 VYVGGLAEEVDDKVLRSAFIPFGDIVDVQMPLDYESEKHRGFAFVEFEQPEDALDSIDNM 74
Query: 93 SGIVTLYNRTLRFALS 108
+ ++ RT+R L+
Sbjct: 75 NE-AEIFGRTIRVNLA 89
>gi|71032451|ref|XP_765867.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352824|gb|EAN33584.1| hypothetical protein TP01_0340 [Theileria parva]
Length = 84
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
++I L + V+ +L+ Q G + DL IP+DK TDK +G AF+EYE EE +AI
Sbjct: 7 IFIRGLSDDVDSNLLFSAFSQFGHITDLNIPKDKFTDKNRGIAFIEYEDEEDAKHAI 63
>gi|632500|gb|AAB50269.1| polyadenylation factor 64 kDa subunit [Xenopus laevis]
Length = 497
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|269859935|ref|XP_002649691.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
gi|269863259|ref|XP_002651156.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
gi|220065037|gb|EED42901.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
gi|220066886|gb|EED44356.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
Length = 241
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
M+ S GC V+IGN+D ++E + L G+V + DK T K KG+ F EYE+
Sbjct: 27 MTEPSKPGCTVFIGNIDFDIDEETIVKELSAVGKVKSFRLLYDKATGKSKGYGFCEYETP 86
Query: 83 EIGHYAIK 90
E+ A+K
Sbjct: 87 EVADMALK 94
>gi|351697169|gb|EHB00088.1| Cleavage stimulation factor 64 kDa subunit [Heterocephalus glaber]
Length = 180
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
+S C+V++GN+ + +E L DI + G VV D+ET KPKG+ F EY+ +E
Sbjct: 13 HSLCSVFVGNIPHEASEEQLRDIFSEVGPVVSFRWVYDRETGKPKGYGFCEYQDQETALS 72
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTT 121
A++ +G R LR + +KN + + T
Sbjct: 73 AMQHLNG-HEFSGRALRVDSAASEKNKELKCLGT 105
>gi|410927616|ref|XP_003977237.1| PREDICTED: cleavage stimulation factor subunit 2-like [Takifugu
rubripes]
Length = 497
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 30 SVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 89
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 90 LNG-REFSGRALRVDNAASEKN 110
>gi|239791068|dbj|BAH72048.1| ACYPI010179 [Acyrthosiphon pisum]
Length = 298
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
VY+G L E+V+++VL I G +VD+ +P D E++K +GFAFVE+E E +I
Sbjct: 15 VYVGGLAEEVDDKVLRSAFIPFGDIVDVQMPLDYESEKHRGFAFVEFEQPEDALDSIDNM 74
Query: 93 SGIVTLYNRTLRFALS 108
+ ++ RT+R L+
Sbjct: 75 NE-AEIFGRTIRVNLA 89
>gi|269865317|ref|XP_002651881.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
gi|220063702|gb|EED42174.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
Length = 170
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
M+ S GC V+IGN+D ++E + L G+V + DK T K KG+ F EYE+
Sbjct: 1 MTEPSKPGCTVFIGNIDFDIDEETIVKELSAVGKVKSFRLLYDKATGKSKGYGFCEYETP 60
Query: 83 EIGHYAIK 90
E+ A+K
Sbjct: 61 EVADMALK 68
>gi|269862977|ref|XP_002651049.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
gi|220065210|gb|EED43006.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
Length = 171
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
M+ S GC V+IGN+D ++E + L G+V + DK T K KG+ F EYE+
Sbjct: 1 MTEPSKPGCTVFIGNIDFDIDEETIVKELSAVGKVKSFRLLYDKATGKSKGYGFCEYETP 60
Query: 83 EIGHYAIK 90
E+ A+K
Sbjct: 61 EVADMALK 68
>gi|195035923|ref|XP_001989421.1| GH10062 [Drosophila grimshawi]
gi|193905421|gb|EDW04288.1| GH10062 [Drosophila grimshawi]
Length = 251
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++ NLDE+V+E +LY++ +QAG + ++ IP D + + F FV Y+ + YA+ L+
Sbjct: 78 LFCNNLDERVSEEILYEVFLQAGPIENVRIPLDN-AGRQRNFGFVTYQHKSAVPYAVDLY 136
Query: 93 SGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSS 126
G+ L+ + L +K + P S
Sbjct: 137 QGL-ELFQKKLTIRQQCVEKPKHQQGRSRNPFSQ 169
>gi|428169524|gb|EKX38457.1| hypothetical protein GUITHDRAFT_48511, partial [Guillardia theta
CCMP2712]
Length = 83
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G LD ++ E + I Q G VD+++PRDK+T K GFAF+ YE + + A+
Sbjct: 12 IYVGGLDYRLTEGDVITIFSQYGEPVDVHLPRDKKTGKSHGFAFLAYEDQRSTNLAVDNL 71
Query: 93 SGIVTLYNRTLR 104
+G L RTLR
Sbjct: 72 NG-SKLLGRTLR 82
>gi|426252723|ref|XP_004020052.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Ovis aries]
Length = 572
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|344275007|ref|XP_003409305.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Loxodonta africana]
Length = 609
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|159474400|ref|XP_001695313.1| RNA binding protein [Chlamydomonas reinhardtii]
gi|158275796|gb|EDP01571.1| RNA binding protein [Chlamydomonas reinhardtii]
Length = 133
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 19 KRQIMSGNSNSG---------CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETD 69
KR+I +G +S ++ G LD + E L + Q G VVDL + RDK++
Sbjct: 15 KREIETGTQDSASWHAKYKHSAYIFAGGLDYDLTEGDLLAVFAQFGEVVDLNLIRDKDSG 74
Query: 70 KPKGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLR 104
K KGFAFV YE + A F+G + RT+R
Sbjct: 75 KSKGFAFVAYEDQRSTVLATDNFNG-AKVAGRTIR 108
>gi|443322691|ref|ZP_21051708.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
gi|442787558|gb|ELR97274.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
Length = 96
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++Y+GNL V + L ++ + G V ++IP ++ET +P+GFAFVE ESE AI
Sbjct: 1 MSIYVGNLSYDVKQEELAEVFAEYGTVKRVHIPLERETSRPRGFAFVEMESESQETAAIG 60
Query: 91 LFSGIVTLYNRTLR 104
G Y R L+
Sbjct: 61 ALDG-AEWYGRELK 73
>gi|363755690|ref|XP_003648060.1| hypothetical protein Ecym_7420 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892096|gb|AET41243.1| hypothetical protein Ecym_7420 [Eremothecium cymbalariae
DBVPG#7215]
Length = 204
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
+ N+ +Y+GNLD +V + LY++ +Q G V + +DK T + +GFAFVE+ +
Sbjct: 2 DQNNLYTIYVGNLDGQVTKEHLYELFVQMGPVYRIRYRKDKITQEYQGFAFVEFYTNSDC 61
Query: 86 HYAIKLFSGIVTLYNRTLR 104
+AIK + V+L+ + L+
Sbjct: 62 EFAIKSLNNSVSLFGKILK 80
>gi|440901693|gb|ELR52585.1| Cleavage stimulation factor subunit 2 [Bos grunniens mutus]
Length = 619
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|426223062|ref|XP_004005698.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ovis aries]
Length = 607
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|88682979|gb|AAI05553.1| CSTF2 protein [Bos taurus]
Length = 632
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|55960587|emb|CAI12647.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|55960979|emb|CAI12553.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
Length = 190
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 44 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 103
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S + AI+ +G L NR T+ +A K ++ S L+++
Sbjct: 104 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQ 155
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 62 IPRDKETDKPKGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLR 104
+P+D+ T + +G+ FVE+ SEE YAIK+ + ++ LY + +R
Sbjct: 1 MPKDRVTGQHQGYGFVEFLSEEDADYAIKIMN-MIKLYGKPIR 42
>gi|301788792|ref|XP_002929813.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ailuropoda melanoleuca]
Length = 552
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|294942558|ref|XP_002783584.1| RNA-binding motif protein, X-linked, putative [Perkinsus marinus
ATCC 50983]
gi|239896081|gb|EER15380.1| RNA-binding motif protein, X-linked, putative [Perkinsus marinus
ATCC 50983]
Length = 191
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+YIGNLD + E L + Q G ++D+ + RDKET K KGF F+ YE + YAI
Sbjct: 41 LYIGNLDRGLTEGDLITVFSQFGEILDVNLVRDKETGKSKGFGFLAYEDQRSTRYAIDNM 100
Query: 93 SGIVTLYNRTLR 104
G L R L+
Sbjct: 101 IGF-NLVGRPLK 111
>gi|332212188|ref|XP_003255200.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Nomascus leucogenys]
Length = 622
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQ 115
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|268569468|ref|XP_002640530.1| Hypothetical protein CBG18692 [Caenorhabditis briggsae]
Length = 85
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
MSG G +VY+GN + E+ + D Q G V ++ I D+ET +P+GFAFVEY E
Sbjct: 1 MSG----GYSVYVGNAPFQSTEQEIGDFFSQKGNVTNVRIVYDRETGRPRGFAFVEYSDE 56
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALS 108
+ A+ +G R LR L+
Sbjct: 57 QSAQRAVNELNG-ADFNGRQLRVNLA 81
>gi|348688369|gb|EGZ28183.1| hypothetical protein PHYSODRAFT_470319 [Phytophthora sojae]
Length = 120
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
M+G ++ +Y+G LD++V E+ LY + G + + IP D T + KGF FVE+E E
Sbjct: 1 MAGKADKRA-LYVGGLDKQVTEQGLYTAFVPFGPIKGVQIPMDYSTQRSKGFGFVEFEDE 59
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDK 112
AI L+ +TLR +++ D+
Sbjct: 60 ADARAAIDNMDE-SELFGKTLRVSIAKPDR 88
>gi|148709763|gb|EDL41709.1| cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Mus
musculus]
Length = 644
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 29 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 88
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQ 115
+G R LR + +KN +
Sbjct: 89 LNG-REFSGRALRVDNAASEKNKE 111
>gi|16769726|gb|AAL29082.1| LP01585p [Drosophila melanogaster]
Length = 232
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++ GNLDE+V E +LY++ +QAG + + IP D +P+ F FV Y+ +A+ L+
Sbjct: 66 LFCGNLDERVTEEILYEVFLQAGPIEGVRIPTDN-NGRPRNFGFVTYQRLCAVPFALDLY 124
Query: 93 SGIVTLYNRTLRFALSGQDKNAQNSS 118
G+ + G+ A N S
Sbjct: 125 QGLELFQKKVTIKQQGGKQLPAYNQS 150
>gi|426252725|ref|XP_004020053.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 2 [Ovis aries]
Length = 612
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|426257831|ref|XP_004022525.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Ovis
aries]
Length = 592
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|426252727|ref|XP_004020054.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 3 [Ovis aries]
Length = 623
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|148277061|ref|NP_112539.2| cleavage stimulation factor subunit 2 tau variant [Mus musculus]
gi|71153235|sp|Q8C7E9.2|CSTFT_MOUSE RecName: Full=Cleavage stimulation factor subunit 2 tau variant;
AltName: Full=CF-1 64 kDa subunit tau variant; AltName:
Full=Cleavage stimulation factor 64 kDa subunit tau
variant; Short=CSTF 64 kDa subunit tau variant; AltName:
Full=TauCstF-64
gi|26330250|dbj|BAC28855.1| unnamed protein product [Mus musculus]
gi|26350087|dbj|BAC38683.1| unnamed protein product [Mus musculus]
Length = 632
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|26341156|dbj|BAC34240.1| unnamed protein product [Mus musculus]
Length = 632
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|11762098|gb|AAG40327.1|AF322194_1 variant polyadenylation protein CSTF-64 [Mus musculus]
Length = 630
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|50510589|dbj|BAD32280.1| mKIAA0689 protein [Mus musculus]
Length = 643
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 28 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 87
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQ 115
+G R LR + +KN +
Sbjct: 88 LNG-REFSGRALRVDNAASEKNKE 110
>gi|345312295|ref|XP_001516274.2| PREDICTED: splicing factor 3B subunit 4-like [Ornithorhynchus
anatinus]
Length = 372
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAF 76
NK + N + G N++IGNLD +++E++LYD G ++ I RD +T KG+AF
Sbjct: 158 NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 217
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSR 127
+ + S + AI+ +G L NR T+ +A K ++ S L+++
Sbjct: 218 INFASFDASDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQ 269
>gi|410043862|ref|XP_003951699.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pan
troglodytes]
Length = 576
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|119224067|gb|AAI26544.1| CSTF2 protein [Bos taurus]
Length = 592
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|20072518|gb|AAH26995.1| Cstf2t protein [Mus musculus]
Length = 637
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|58803060|gb|AAW82658.1| cyclophilin [Haemonchus contortus]
Length = 324
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G E+V E+VL I G +V + IP D ET K +GF FVE+E E AI
Sbjct: 14 LYVGGFGEEVTEKVLMAAFITFGDIVAISIPMDYETGKHRGFGFVEFELAEDAAAAIDNM 73
Query: 93 SGIVTLYNRTLRFALSGQDKNAQNSS 118
+ L+ RT+R + K + SS
Sbjct: 74 N-ESELFGRTIRCNFARPPKATERSS 98
>gi|358421036|ref|XP_001254105.2| PREDICTED: cleavage stimulation factor subunit 2-like [Bos taurus]
Length = 331
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQ 115
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|50305767|ref|XP_452844.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641977|emb|CAH01695.1| KLLA0C14388p [Kluyveromyces lactis]
Length = 203
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETD---KPKGFAFVEYESEEIGHYAI 89
VY+GNLD +VN+ +LY++ +QAG + + P++K+ + + +AF+++ ++++ Y
Sbjct: 5 VYVGNLDSRVNKSLLYELFVQAGPISYIKFPKEKQDEDDSQHSKYAFIKFVNDDVD-YVC 63
Query: 90 KLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISHHSMR 149
KLF V+LY + L+ S + + + S VP N +I +R
Sbjct: 64 KLFDNRVSLYGKPLKVRRSNKQPETTDFDVGAKLFVKNLDESIDVPQLSNIFKIFGKLLR 123
>gi|157821159|ref|NP_001101056.1| cleavage stimulation factor subunit 2 tau variant [Rattus
norvegicus]
gi|149062701|gb|EDM13124.1| rCG47773 [Rattus norvegicus]
Length = 629
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQ 115
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|20129123|ref|NP_608497.1| CG11454 [Drosophila melanogaster]
gi|7296251|gb|AAF51542.1| CG11454 [Drosophila melanogaster]
Length = 238
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++ GNLDE+V E +LY++ +QAG + + IP D +P+ F FV Y+ +A+ L+
Sbjct: 72 LFCGNLDERVTEEILYEVFLQAGPIEGVRIPTDN-NGRPRNFGFVTYQRLCAVPFALDLY 130
Query: 93 SGIVTLYNRTLRFALSGQDKNAQNSS 118
G+ + G+ A N S
Sbjct: 131 QGLELFQKKVTIKQQGGKQLPAYNQS 156
>gi|335306285|ref|XP_003360436.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Sus scrofa]
Length = 592
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|27807239|ref|NP_777110.1| cleavage stimulation factor subunit 2 [Bos taurus]
gi|71153228|sp|Q8HXM1.1|CSTF2_BOVIN RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|24416593|gb|AAN05427.1| CstF-64 [Bos taurus]
gi|296470997|tpg|DAA13112.1| TPA: cleavage stimulation factor 64 kDa subunit [Bos taurus]
Length = 572
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|431839028|gb|ELK00957.1| Cleavage stimulation factor 64 kDa subunit, tau variant [Pteropus
alecto]
Length = 601
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|426257829|ref|XP_004022524.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Ovis
aries]
Length = 572
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|60677845|gb|AAX33429.1| RE36241p [Drosophila melanogaster]
Length = 238
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++ GNLDE+V E +LY++ +QAG + + IP D +P+ F FV Y+ +A+ L+
Sbjct: 72 LFCGNLDERVTEEILYEVFLQAGPIEGVRIPTDN-NGRPRNFGFVTYQRLCAVPFALDLY 130
Query: 93 SGIVTLYNRTLRFALSGQDKNAQNSS 118
G+ + G+ A N S
Sbjct: 131 QGLELFQKKVTIKQQGGKQLPAYNQS 156
>gi|291404363|ref|XP_002718535.1| PREDICTED: cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kDa, tau variant [Oryctolagus cuniculus]
Length = 601
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|195335275|ref|XP_002034300.1| GM21798 [Drosophila sechellia]
gi|194126270|gb|EDW48313.1| GM21798 [Drosophila sechellia]
Length = 301
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
SN +Y+G L ++V ER+L + I G + D+ +P D E+ + +GFAF+EYE E
Sbjct: 2 SNDKRTIYVGGLADEVTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAA 61
Query: 87 YAIKLFSGIVTLYNRTLRFALS 108
A+ + L RT+R L+
Sbjct: 62 AAMDNMND-SELCGRTIRVNLA 82
>gi|196005405|ref|XP_002112569.1| hypothetical protein TRIADDRAFT_56724 [Trichoplax adhaerens]
gi|190584610|gb|EDV24679.1| hypothetical protein TRIADDRAFT_56724 [Trichoplax adhaerens]
Length = 316
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 17/117 (14%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI AG VV + D+E+ KPKG+ F E++ +E A++
Sbjct: 14 SVFVGNIPYEATEEQLKDIFGSAGPVVSFRLVYDRESGKPKGYGFCEFQDKETALSAMRN 73
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISHHSM 148
SG L R+LR D A S K + P+ MP G ++ SM
Sbjct: 74 LSG-YELNGRSLRV-----DSAA-----------SEKDKDLPLQMPAGGGGLAEPSM 113
>gi|197246895|gb|AAI69065.1| Cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Rattus
norvegicus]
Length = 629
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQ 115
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|395850633|ref|XP_003797884.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Otolemur garnettii]
Length = 596
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|395820735|ref|XP_003783716.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Otolemur garnettii]
Length = 601
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|308504790|ref|XP_003114578.1| hypothetical protein CRE_28336 [Caenorhabditis remanei]
gi|308258760|gb|EFP02713.1| hypothetical protein CRE_28336 [Caenorhabditis remanei]
Length = 84
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
S SG +VY+GN + E+ L D G+V ++ I D+ET +P+GFAFVE+ E
Sbjct: 2 SGSGFSVYVGNATYQTTEQELGDYFSTVGQVTNVRIVCDRETGRPRGFAFVEFADEAGAQ 61
Query: 87 YAIKLFSGIVTLYNRTLRFALS 108
A +G V R LR L+
Sbjct: 62 RACDQLNG-VDFNGRQLRVNLA 82
>gi|348576422|ref|XP_003473986.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Cavia porcellus]
Length = 630
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|20380061|gb|AAH28239.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Homo sapiens]
gi|325463311|gb|ADZ15426.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [synthetic construct]
Length = 616
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|410353769|gb|JAA43488.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
Length = 577
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|354476123|ref|XP_003500274.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 2 [Cricetulus griseus]
Length = 623
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|348570430|ref|XP_003471000.1| PREDICTED: cleavage stimulation factor subunit 2-like [Cavia
porcellus]
Length = 577
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|311276614|ref|XP_003135279.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Sus scrofa]
Length = 572
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|241951780|ref|XP_002418612.1| RNA binding protein, putative; spliceosome associated protein,
putative [Candida dubliniensis CD36]
gi|223641951|emb|CAX43915.1| RNA binding protein, putative [Candida dubliniensis CD36]
Length = 259
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 20 RQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY 79
R+ + + N ++Y GN+D +V E ++Y++ IQ G + + +P+D+ +G+ FVE+
Sbjct: 6 RKRLDSDRNIEASLYFGNIDPQVTELLMYELFIQFGPIKSINMPKDRILKTHQGYGFVEF 65
Query: 80 ESEEIGHYAIKLFSGIVTLYNRTLRF 105
++ Y + + G V LY + L+
Sbjct: 66 KNSADAKYTMDILRG-VRLYGKALKL 90
>gi|281348298|gb|EFB23882.1| hypothetical protein PANDA_020101 [Ailuropoda melanoleuca]
Length = 612
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|14149675|ref|NP_056050.1| cleavage stimulation factor subunit 2 tau variant [Homo sapiens]
gi|71153234|sp|Q9H0L4.1|CSTFT_HUMAN RecName: Full=Cleavage stimulation factor subunit 2 tau variant;
AltName: Full=CF-1 64 kDa subunit tau variant; AltName:
Full=Cleavage stimulation factor 64 kDa subunit tau
variant; Short=CSTF 64 kDa subunit tau variant; AltName:
Full=TauCstF-64
gi|12053011|emb|CAB66681.1| hypothetical protein [Homo sapiens]
gi|24416591|gb|AAN05429.1| tCstF-64 [Homo sapiens]
gi|119574527|gb|EAW54142.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Homo sapiens]
gi|189067256|dbj|BAG36966.1| unnamed protein product [Homo sapiens]
Length = 616
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|410974961|ref|XP_003993907.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Felis
catus]
Length = 613
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|291408103|ref|XP_002720432.1| PREDICTED: cleavage stimulation factor subunit 2 [Oryctolagus
cuniculus]
Length = 576
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|194205912|ref|XP_001917732.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Equus caballus]
Length = 619
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|194042423|ref|XP_001926989.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Sus scrofa]
Length = 615
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|388452994|ref|NP_001253727.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|355758732|gb|EHH61510.1| hypothetical protein EGM_21244 [Macaca fascicularis]
gi|383416951|gb|AFH31689.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|384946038|gb|AFI36624.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|387541538|gb|AFJ71396.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
Length = 620
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|452822947|gb|EME29962.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Galdieria
sulphuraria]
Length = 368
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 25 GNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
GN N+ +++G L + E L GRV+D I RDK T P+GF FV +E EE
Sbjct: 44 GNQNNNSKIFVGGLSWETTEETLQKYFESYGRVLDCVIMRDKHTGHPRGFGFVTFEKEE 102
>gi|4557493|ref|NP_001316.1| cleavage stimulation factor subunit 2 [Homo sapiens]
gi|332861154|ref|XP_003317595.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Pan
troglodytes]
gi|397478196|ref|XP_003810439.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Pan
paniscus]
gi|426396653|ref|XP_004064546.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Gorilla
gorilla gorilla]
gi|461847|sp|P33240.1|CSTF2_HUMAN RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|181139|gb|AAA35724.1| cleavage stimulation factor [Homo sapiens]
gi|17389334|gb|AAH17712.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Homo
sapiens]
gi|32879899|gb|AAP88780.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Homo
sapiens]
gi|61359609|gb|AAX41742.1| cleavage stimulation factor 3' pre-RNA subunit 2 [synthetic
construct]
gi|61359616|gb|AAX41743.1| cleavage stimulation factor 3' pre-RNA subunit 2 [synthetic
construct]
gi|119623223|gb|EAX02818.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, isoform
CRA_a [Homo sapiens]
gi|123981258|gb|ABM82458.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[synthetic construct]
gi|123996091|gb|ABM85647.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[synthetic construct]
gi|261860120|dbj|BAI46582.1| Cleavage stimulation factor 64 kDa subunit [synthetic construct]
gi|410256936|gb|JAA16435.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
gi|410289934|gb|JAA23567.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
Length = 577
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|440802669|gb|ELR23598.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 355
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNLD + E + + Q GRV DL RDK+T PKGFAF+ Y+ A+
Sbjct: 33 IFVGNLDHGLTEGDIVAVFEQYGRVRDLNRARDKKTGDPKGFAFLGYQDPRSCILAVDNL 92
Query: 93 SGIVTLYNRTLR 104
+GI L RTLR
Sbjct: 93 NGI-QLVGRTLR 103
>gi|403298766|ref|XP_003940178.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 597
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|354476121|ref|XP_003500273.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Cricetulus griseus]
Length = 614
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|332254744|ref|XP_003276492.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Nomascus leucogenys]
Length = 597
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|149055454|gb|EDM07038.1| rCG38164 [Rattus norvegicus]
Length = 363
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQ 115
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|402880821|ref|XP_003903988.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Papio
anubis]
Length = 620
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|297304342|ref|XP_001089558.2| PREDICTED: cleavage stimulation factor subunit 2-like [Macaca
mulatta]
gi|402910777|ref|XP_003918028.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 3 [Papio
anubis]
gi|355704983|gb|EHH30908.1| hypothetical protein EGK_20728 [Macaca mulatta]
gi|355757534|gb|EHH61059.1| hypothetical protein EGM_18986 [Macaca fascicularis]
Length = 597
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|296235968|ref|XP_002763125.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Callithrix jacchus]
Length = 597
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|192764310|gb|ACF05699.1| betaCstF-64 variant 2 [Homo sapiens]
Length = 597
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|431895723|gb|ELK05144.1| Cleavage stimulation factor 64 kDa subunit [Pteropus alecto]
Length = 577
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|344296752|ref|XP_003420068.1| PREDICTED: cleavage stimulation factor subunit 2-like [Loxodonta
africana]
Length = 582
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|453231816|ref|NP_001263666.1| Protein EIF-3.G, isoform a [Caenorhabditis elegans]
gi|413001245|emb|CCO25605.1| Protein EIF-3.G, isoform a [Caenorhabditis elegans]
Length = 262
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 20 RQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY 79
RQI S+ + NL +++NE L D+ + GRV+ ++I RDK T PKGFAFV +
Sbjct: 172 RQIDRNRSDEN-TCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTF 230
Query: 80 ESEEIGHYAIKLFSGIVTLYNRTLRFALS 108
ES + AI + I +Y+ L+ +
Sbjct: 231 ESRDDAARAIAELNDI-RMYHMVLKVEWT 258
>gi|397469483|ref|XP_003806381.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pan
paniscus]
Length = 615
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|355562595|gb|EHH19189.1| hypothetical protein EGK_19854 [Macaca mulatta]
Length = 610
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 7 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 66
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 67 LNG-REFSGRALRVDNAASEKNKEE 90
>gi|348515337|ref|XP_003445196.1| PREDICTED: cleavage stimulation factor subunit 2-like [Oreochromis
niloticus]
Length = 478
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 30 SVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 89
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQ 115
+G R LR + +KN +
Sbjct: 90 LNG-REFSGRALRVDNAASEKNKE 112
>gi|380798899|gb|AFE71325.1| cleavage stimulation factor subunit 2, partial [Macaca mulatta]
Length = 575
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 15 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 74
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 75 LNG-REFSGRALRVDNAASEKN 95
>gi|410043860|ref|XP_001163035.2| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 4 [Pan troglodytes]
gi|410335357|gb|JAA36625.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335359|gb|JAA36626.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335361|gb|JAA36627.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335363|gb|JAA36628.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
Length = 615
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|21619877|gb|AAH33135.1| Similar to cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kD, partial [Homo sapiens]
Length = 559
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 16 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 75
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 76 LNG-REFSGRALRVDNAASEKNKEE 99
>gi|74007936|ref|XP_549135.2| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Canis
lupus familiaris]
Length = 597
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|332861156|ref|XP_529072.3| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Pan
troglodytes]
gi|397478198|ref|XP_003810440.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Pan
paniscus]
gi|426396655|ref|XP_004064547.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Gorilla
gorilla gorilla]
Length = 597
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|395850631|ref|XP_003797883.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Otolemur garnettii]
Length = 576
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|402910773|ref|XP_003918026.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Papio
anubis]
gi|402910775|ref|XP_003918027.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Papio
anubis]
Length = 577
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|74007924|ref|XP_861405.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 5 [Canis
lupus familiaris]
Length = 577
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|390480015|ref|XP_003735829.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|194332803|ref|NP_001123707.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Xenopus
(Silurana) tropicalis]
gi|189442601|gb|AAI67314.1| LOC100170457 protein [Xenopus (Silurana) tropicalis]
Length = 498
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|17533393|ref|NP_495778.1| Protein EIF-3.G, isoform b [Caenorhabditis elegans]
gi|3024026|sp|Q19706.1|EIF3G_CAEEL RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Eukaryotic
translation initiation factor 3 subunit 4
gi|3876226|emb|CAA90354.1| Protein EIF-3.G, isoform b [Caenorhabditis elegans]
Length = 256
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 20 RQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY 79
RQI S+ + NL +++NE L D+ + GRV+ ++I RDK T PKGFAFV +
Sbjct: 166 RQIDRNRSDEN-TCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTF 224
Query: 80 ESEEIGHYAIKLFSGIVTLYNRTLRFALS 108
ES + AI + I +Y+ L+ +
Sbjct: 225 ESRDDAARAIAELNDI-RMYHMVLKVEWT 252
>gi|301788318|ref|XP_002929575.1| PREDICTED: cleavage stimulation factor subunit 2-like [Ailuropoda
melanoleuca]
Length = 582
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|197100099|ref|NP_001125111.1| cleavage stimulation factor subunit 2 [Pongo abelii]
gi|71153230|sp|Q5RDA3.1|CSTF2_PONAB RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|55726993|emb|CAH90254.1| hypothetical protein [Pongo abelii]
Length = 577
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|403298762|ref|XP_003940176.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403298764|ref|XP_003940177.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 577
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|448123377|ref|XP_004204677.1| Piso0_000540 [Millerozyma farinosa CBS 7064]
gi|448125660|ref|XP_004205235.1| Piso0_000540 [Millerozyma farinosa CBS 7064]
gi|358249868|emb|CCE72934.1| Piso0_000540 [Millerozyma farinosa CBS 7064]
gi|358350216|emb|CCE73495.1| Piso0_000540 [Millerozyma farinosa CBS 7064]
Length = 256
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N ++Y N+D +V E +LY++ IQ G V L +P+D+ +G+ FVE+++ + Y
Sbjct: 14 NINASLYFSNIDYQVTELLLYELFIQFGPVRTLNLPKDRILKTHQGYGFVEFKTAKDAEY 73
Query: 88 AIKLFSGIVTLYNRTLRF 105
+++ GI L+ + L+
Sbjct: 74 VLEILRGI-RLFGKVLKL 90
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYES 81
MSG + G ++I NL V+E++L D + G ++ + RD ++ KG+ F+ Y+
Sbjct: 115 MSG-VDVGAKLFIKNLHPLVDEKMLRDTFSKFGNIIRPPVVARDPDSGASKGYGFITYDD 173
Query: 82 EEIGHYAIKLFSGIVTLYNR 101
AI+ +G++ N+
Sbjct: 174 FAASDLAIEKMNGVILTNNK 193
>gi|351709510|gb|EHB12429.1| Cleavage stimulation factor 64 kDa subunit [Heterocephalus glaber]
Length = 597
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|194373969|dbj|BAG62297.1| unnamed protein product [Homo sapiens]
Length = 553
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|192764312|gb|ACF05700.1| betaCstF-64 variant 3 [Mus musculus]
Length = 630
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|426364779|ref|XP_004049473.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Gorilla gorilla gorilla]
gi|426364781|ref|XP_004049474.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Gorilla gorilla gorilla]
Length = 617
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|22478042|gb|AAH36719.1| Cstf2 protein [Mus musculus]
Length = 510
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQ 115
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|410988989|ref|XP_004000752.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
2 [Felis catus]
Length = 577
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|332254742|ref|XP_003276491.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Nomascus leucogenys]
Length = 577
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|192764316|gb|ACF05702.1| betaCstF-64 variant 1 [Mus musculus]
Length = 604
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|355681345|gb|AER96778.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Mustela
putorius furo]
Length = 582
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|126342916|ref|XP_001364467.1| PREDICTED: cleavage stimulation factor subunit 2-like [Monodelphis
domestica]
Length = 551
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQ 115
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|147898871|ref|NP_001080179.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Xenopus
laevis]
gi|27735464|gb|AAH41291.1| Cstf-64 protein [Xenopus laevis]
Length = 518
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|67923998|ref|ZP_00517451.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416401054|ref|ZP_11687154.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|67854173|gb|EAM49479.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357262154|gb|EHJ11338.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 81
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
++Y+GNL +V E L ++ + G V +++P DKET +P+GFAFVE E++ AI+
Sbjct: 2 SIYVGNLSYEVKEEDLNEVFAEYGTVKRVHVPTDKETGRPRGFAFVELETKAEESSAIET 61
Query: 92 FSGIVTLYNRTLR 104
G RT++
Sbjct: 62 LDG-AEWMGRTMK 73
>gi|196115100|ref|NP_001124486.1| cleavage stimulation factor, 3' pre-RNA subunit 2 [Rattus
norvegicus]
gi|195539770|gb|AAI68251.1| Cstf2 protein [Rattus norvegicus]
Length = 575
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|195350009|ref|XP_002041534.1| GM16717 [Drosophila sechellia]
gi|194123307|gb|EDW45350.1| GM16717 [Drosophila sechellia]
Length = 237
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++ GNLDE+V E +LY++ +QAG + + IP D +P+ F FV Y+ +A+ L+
Sbjct: 72 LFCGNLDERVTEEILYEVFLQAGPIEGVRIPTDN-NGRPRNFGFVTYQRLCAVPFALDLY 130
Query: 93 SGIVTLYNRTLRFALSG 109
G+ L+ + + G
Sbjct: 131 HGL-ELFQKKVTIKQQG 146
>gi|18875338|ref|NP_573459.1| cleavage stimulation factor subunit 2 [Mus musculus]
gi|71153229|sp|Q8BIQ5.2|CSTF2_MOUSE RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|11139720|gb|AAG31814.1|AF317552_1 polyadenylation protein CSTF64 [Mus musculus]
gi|26353226|dbj|BAC40243.1| unnamed protein product [Mus musculus]
Length = 580
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|402586187|gb|EJW80125.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase-13, partial
[Wuchereria bancrofti]
Length = 187
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G E+VNE++L I G +V + IP D ET K +GF FVEYE E AI
Sbjct: 15 LYVGGFGEEVNEKILQAGFIPFGEIVSISIPLDYETGKHRGFGFVEYELAEDAAAAIDNM 74
Query: 93 SGIVTLYNRTLR 104
+ L+ RT+R
Sbjct: 75 ND-SELFGRTIR 85
>gi|76154543|gb|AAX26008.2| SJCHGC02654 protein [Schistosoma japonicum]
Length = 195
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 9/71 (12%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+YIGN++ ++ +LY++ +QAG + D+ + K+T FAFV +E EE YA LF
Sbjct: 7 LYIGNINSEITTELLYELFLQAGPLEDVTV---KDT-----FAFVTFEDEESVPYACSLF 58
Query: 93 SGIVTLYNRTL 103
GI TLY R L
Sbjct: 59 EGI-TLYGREL 68
>gi|324514401|gb|ADY45855.1| Cleavage stimulation factor subunit 2 [Ascaris suum]
Length = 324
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 24 SGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
S S +V++GN+ +V E L + Q G VV L + D+ET KPKG+ F EY +
Sbjct: 16 SSADRSARSVFVGNISYEVGEEQLKQVFSQVGPVVHLRLVHDRETGKPKGYGFCEYNDPQ 75
Query: 84 IGHYAIKLFSGIVTLYNRTLRF-ALSGQDKNA 114
AI+ +G L R LR + +G +++A
Sbjct: 76 TAESAIRNLNGY-ELNGRQLRVDSAAGGERSA 106
>gi|297686917|ref|XP_002820977.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pongo
abelii]
Length = 625
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|148688462|gb|EDL20409.1| cleavage stimulation factor, 3' pre-RNA subunit 2 [Mus musculus]
Length = 363
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQ 115
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|26328597|dbj|BAC28037.1| unnamed protein product [Mus musculus]
Length = 580
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|84999346|ref|XP_954394.1| rna-binding protein [Theileria annulata]
gi|65305392|emb|CAI73717.1| rna-binding protein, putative [Theileria annulata]
Length = 84
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
++I + + V+ +L+ Q G + DL IP+DK TDK +G AFVEYE EE +AI
Sbjct: 7 IFIRGIADDVDSNLLFSAFSQFGHITDLNIPKDKFTDKNRGIAFVEYEDEEDAKHAI 63
>gi|403260042|ref|XP_003922497.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Saimiri boliviensis boliviensis]
Length = 621
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|341896374|gb|EGT52309.1| CBN-EIF-3.G protein [Caenorhabditis brenneri]
Length = 262
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 20 RQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY 79
RQI S+ + NL +++NE L D+ + GRV+ ++I RDK T PKGFAFV +
Sbjct: 172 RQIDRNRSDEN-TCRVTNLPQEMNEDELRDVFGKIGRVIRIFIARDKITALPKGFAFVTF 230
Query: 80 ESEEIGHYAIKLFSGIVTLYNRTLRFALS 108
ES + AI + I +Y+ L+ +
Sbjct: 231 ESRDDAARAIAELNDI-RMYHMVLKVEWT 258
>gi|51258747|gb|AAH80037.1| Cstf-64-prov protein [Xenopus laevis]
Length = 498
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|192764314|gb|ACF05701.1| alphaCstF-64 variant 4 [Mus musculus]
Length = 554
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|432877328|ref|XP_004073146.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
isoform 1 [Oryzias latipes]
Length = 494
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 30 SVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 89
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQ 115
+G R LR + +KN +
Sbjct: 90 LNG-REFSGRALRVDNAASEKNKE 112
>gi|449498377|ref|XP_002191180.2| PREDICTED: cleavage stimulation factor subunit 2 [Taeniopygia
guttata]
Length = 575
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|237838167|ref|XP_002368381.1| nuclear cap-binding protein, putative [Toxoplasma gondii ME49]
gi|211966045|gb|EEB01241.1| nuclear cap-binding protein, putative [Toxoplasma gondii ME49]
gi|221484348|gb|EEE22644.1| 20 kD nuclear cap binding protein, putative [Toxoplasma gondii GT1]
gi|221505675|gb|EEE31320.1| 20 kD nuclear cap binding protein, putative [Toxoplasma gondii VEG]
Length = 282
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 87/224 (38%), Gaps = 48/224 (21%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
C VY+GNL+ E LY++ QAG + + + +++T P GFAFVE+ + A+
Sbjct: 34 CVVYVGNLNFSTTEDELYEVFSQAGLIRRVVMGLNRQTRAPCGFAFVEFFRPQSAQIAVA 93
Query: 91 LFSGIVTLYNRTLRF-ALSGQD-------------------------------------- 111
+ +G + R +R A SG+D
Sbjct: 94 VLNG-CSCDGRVIRVDADSGEDIDGDRKYGRGFTGRQWRDEYREEYDVGRGGEGRKRSRE 152
Query: 112 KNAQNSSMTTTPLSSRKSRSDPVP-MPVNGMEISHHS------MRISVPRHYSSEEPPPP 164
+ A + + P+ + + P PV G +S S R+ R +S PPPP
Sbjct: 153 EQALETPVVYAPMHAMPGAAGLFPAQPVAGAFVSVSSDNLPPWSRVVKARTVASVPPPPP 212
Query: 165 GVTLETNGYETHLNVTNYDYSRRVFGATLDSISRSRSGHYNSSN 208
GV L T + + FG+ L + +++G + N
Sbjct: 213 GV-LSTEAFALGVQAGAPSAGSAAFGSYLQLVGNAQTGGNSRRN 255
>gi|156377813|ref|XP_001630840.1| predicted protein [Nematostella vectensis]
gi|156217869|gb|EDO38777.1| predicted protein [Nematostella vectensis]
Length = 298
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
Y+G L E+V+E+VL+ I G + D+ IP D T K +GF FVE+E E AI
Sbjct: 7 AYVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNM 66
Query: 93 SGIVTLYNRTLRFALS 108
+ L+ RT+R L+
Sbjct: 67 NE-SELFGRTIRVNLA 81
>gi|17553656|ref|NP_499734.1| Protein CPF-2 [Caenorhabditis elegans]
gi|3877650|emb|CAB05746.1| Protein CPF-2 [Caenorhabditis elegans]
Length = 336
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 25 GNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEI 84
GN S +V++GN+ V+E + I +AG V+ + + D+ET KPKG+ F+E+ +
Sbjct: 12 GNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQT 71
Query: 85 GHYAIKLFSGIVTLYNRTLR 104
AI+ +G L R LR
Sbjct: 72 AEVAIRNLNG-YELSGRILR 90
>gi|86608306|ref|YP_477068.1| RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556848|gb|ABD01805.1| putative RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 175
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+GNL E+V+ + L + AG V+ + RD++T K +GF FV +EE I+ F
Sbjct: 5 LYVGNLPEEVDRQALEKLFRSAGEVISTKVIRDRKTGKCRGFGFVTVNTEEQAQQYIEKF 64
Query: 93 SGIVTLYNRTLRFALSG-QDKNAQNSSMTTTPL-SSRKSR 130
+G + + LR L+ +D+ + S T T SS++SR
Sbjct: 65 NGH-SFGDVNLRIELAQPRDRGEEGESKTATSEPSSKESR 103
>gi|194756974|ref|XP_001960745.1| GF11346 [Drosophila ananassae]
gi|190622043|gb|EDV37567.1| GF11346 [Drosophila ananassae]
Length = 394
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 23 MSGN---SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY 79
+ GN SN VY+G L ++V ER+L + I G + D+ +P D E+ + +GFAF+EY
Sbjct: 89 LCGNESMSNDKRTVYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQRHRGFAFIEY 148
Query: 80 ESEEIGHYAIKLFSGIVTLYNRTLRFALS 108
E E AI + L RT+R L+
Sbjct: 149 EQGEDAASAIDNMND-SELCGRTIRVNLA 176
>gi|432877330|ref|XP_004073147.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
isoform 2 [Oryzias latipes]
Length = 479
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 30 SVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 89
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQ 115
+G R LR + +KN +
Sbjct: 90 LNG-REFSGRALRVDNAASEKNKE 112
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 13 DVVSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPK 72
DV ++ S ++IGNL V+E +++ + G V + +P+D ++ +PK
Sbjct: 294 DVTENRAKKFNDQRSAPSSTLFIGNLSFDVSEDDVWNAFSEHGEVSGVRLPKDPDSGRPK 353
Query: 73 GFAFVEYESEEIGHYAIKLFSGIVTLYNRTLRFALS 108
GF +VE+ ++E AI +G L R LR S
Sbjct: 354 GFGYVEFAAQESAQAAIDAMTG-QELAGRPLRLDFS 388
>gi|170046410|ref|XP_001850759.1| peptidyl-prolyl cis-trans isomerase E [Culex quinquefasciatus]
gi|167869182|gb|EDS32565.1| peptidyl-prolyl cis-trans isomerase E [Culex quinquefasciatus]
Length = 308
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
VY+G L ++V E+++ D I G +VD+ +P D E+ K +GFAF+E+E+ E A+
Sbjct: 8 VYVGGLSDEVTEKLINDAFIPFGDLVDIQMPVDYESQKHRGFAFIEFENAEDAAAAV 64
>gi|156045437|ref|XP_001589274.1| hypothetical protein SS1G_09907 [Sclerotinia sclerotiorum 1980]
gi|154694302|gb|EDN94040.1| hypothetical protein SS1G_09907 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 321
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E + DI AG V++ + D+ET +PKGF F EY + A++
Sbjct: 8 SVFVGNIPYGLTEEQIVDIFSSAGNVINFRLVYDRETGRPKGFGFAEYPDSDSAASAVRN 67
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQNSSMTTTP 123
+ + NR LR S +NS+ T P
Sbjct: 68 LND-YEIMNRKLRVDFSNDGGEEENSAPTYQP 98
>gi|347830477|emb|CCD46174.1| hypothetical protein [Botryotinia fuckeliana]
Length = 323
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E + DI AG VV+ + D+ET +PKGF F EY + A++
Sbjct: 9 SVFVGNIPYGLTEEQIIDIFSSAGNVVNFRLVYDRETGRPKGFGFAEYPDSDSAASAVRN 68
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQNSSMTTTP 123
+ + NR LR S +NS+ T P
Sbjct: 69 LND-YEIMNRKLRVDFSNDGGEEENSAPTYQP 99
>gi|326673799|ref|XP_003199996.1| PREDICTED: cleavage stimulation factor subunit 2-like [Danio rerio]
Length = 488
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 25 SVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 84
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 85 LNG-REFSGRALRVDNAASEKNKEE 108
>gi|154290312|ref|XP_001545753.1| hypothetical protein BC1G_15665 [Botryotinia fuckeliana B05.10]
Length = 322
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E + DI AG VV+ + D+ET +PKGF F EY + A++
Sbjct: 9 SVFVGNIPYGLTEEQIIDIFSSAGNVVNFRLVYDRETGRPKGFGFAEYPDSDSAASAVRN 68
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQNSSMTTTP 123
+ + NR LR S +NS+ T P
Sbjct: 69 LND-YEIMNRKLRVDFSNDGGEEENSAPTYQP 99
>gi|124808629|ref|XP_001348367.1| spliceosome-associated protein, putative [Plasmodium falciparum
3D7]
gi|23497260|gb|AAN36806.1|AE014819_17 spliceosome-associated protein, putative [Plasmodium falciparum
3D7]
Length = 484
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N+ +YI NLD +V+E +L ++ +Q G V +++IPRDK G+ FVEYE E Y
Sbjct: 17 NNEATLYIANLDAQVDEEILCELFMQCGNVKNVHIPRDKINGYHAGYGFVEYEYEYECEY 76
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A + + + L+ + LR + QDK
Sbjct: 77 AANILN-MTKLFGKALRCNKATQDK 100
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G N++IGNLD++V+E++L+DI G+++ + + R+ E D KG F+ Y++ E AI
Sbjct: 106 GANLFIGNLDDEVDEKMLFDIFSSFGQIMTVKVMRN-EDDTSKGHGFISYDNFESSDLAI 164
Query: 90 K 90
+
Sbjct: 165 E 165
>gi|429329604|gb|AFZ81363.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 494
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
C +YIG+LD V E + I G + + +PRD T+K KG+ FVEY +E AI
Sbjct: 152 CRIYIGSLDPDVKEEDIRTIFSSFGEITCIEMPRDPSTNKSKGYCFVEYRKKESADVAIV 211
Query: 91 LFSGI 95
G
Sbjct: 212 SMQGF 216
>gi|15237641|ref|NP_201225.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|30697964|ref|NP_851261.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|9759396|dbj|BAB09851.1| unnamed protein product [Arabidopsis thaliana]
gi|17380868|gb|AAL36246.1| unknown protein [Arabidopsis thaliana]
gi|21689657|gb|AAM67450.1| unknown protein [Arabidopsis thaliana]
gi|22022546|gb|AAM83231.1| AT5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|23505861|gb|AAN28790.1| At5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|332010470|gb|AED97853.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|332010471|gb|AED97854.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
Length = 303
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 47 LYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLFSG-IVTLYNRTLRF 105
LY + + G+VVD++IPRD+ T +GFAFV Y+ ++ H A++ G +V T++F
Sbjct: 32 LYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERLDGRVVDGREITVQF 91
Query: 106 ALSG 109
A G
Sbjct: 92 AKYG 95
>gi|9843653|emb|CAC03600.1| splicing factor SC35 [Arabidopsis thaliana]
Length = 303
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 47 LYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLFSG-IVTLYNRTLRF 105
LY + + G+VVD++IPRD+ T +GFAFV Y+ ++ H A++ G +V T++F
Sbjct: 32 LYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERLDGRVVDGREITVQF 91
Query: 106 ALSG 109
A G
Sbjct: 92 AKYG 95
>gi|452840079|gb|EME42017.1| hypothetical protein DOTSEDRAFT_72945 [Dothistroma septosporum
NZE10]
Length = 339
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
M+ G V+IGN+ V+E ++ +I G+V++ + DKET +PKGF F+EY
Sbjct: 1 MATREKGGRVVFIGNIPYGVSEEMIMEIFSSCGKVMNFRLVYDKETGQPKGFGFLEYSDT 60
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDK 112
+ AI+ + L RTLR S ++
Sbjct: 61 DSAQSAIRNLNE-YELNGRTLRVDFSNDNR 89
>gi|76253771|ref|NP_956408.2| cleavage stimulation factor subunit 2 [Danio rerio]
gi|41107668|gb|AAH65442.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2 [Danio rerio]
Length = 488
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 25 SVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 84
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 85 LNG-REFSGRALRVDNAASEKNKEE 108
>gi|218441262|ref|YP_002379591.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
gi|218173990|gb|ACK72723.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
Length = 97
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+GNL +V ++ L DI G+V +Y+P D+ET + +GFAFVE E+ ++ AI
Sbjct: 3 IYVGNLAFEVEDKHLSDIFSDYGKVTRVYMPTDRETGQRRGFAFVEMETPQMEDAAISAL 62
Query: 93 SG 94
G
Sbjct: 63 DG 64
>gi|320168617|gb|EFW45516.1| hypothetical protein CAOG_03500 [Capsaspora owczarzaki ATCC 30864]
Length = 385
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
+S C V++GN+ V E+ + D+ Q G V+ + D++T KPKGF F EY E
Sbjct: 3 DSKC-VFVGNISYDVTEQEVIDLCSQVGPVISFRLVFDRDTGKPKGFGFCEYTDAETAQS 61
Query: 88 AIKLFSGIVTLYNRTLRFALSGQD 111
AI+ + + L R +R + D
Sbjct: 62 AIRNLNDL-ELKGRRIRVDFAESD 84
>gi|444518829|gb|ELV12414.1| Cleavage stimulation factor subunit 2 [Tupaia chinensis]
Length = 409
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|268530192|ref|XP_002630222.1| C. briggsae CBR-EIF-3.G.1 protein [Caenorhabditis briggsae]
gi|268570827|ref|XP_002648625.1| C. briggsae CBR-EIF-3.G.2 protein [Caenorhabditis briggsae]
Length = 255
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
M N + + NL +++NE L D+ + GRV+ ++I RDK T PKGFAFV +ES
Sbjct: 167 MERNRSDENTCRVTNLPQEMNEDELRDVFGRIGRVIRIFIARDKITGLPKGFAFVTFESR 226
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALS 108
+ AI + I +Y+ L+ +
Sbjct: 227 DDAARAIAELNDI-RMYHMVLKVEWT 251
>gi|294659049|ref|XP_461388.2| DEHA2F24068p [Debaryomyces hansenii CBS767]
gi|202953578|emb|CAG89795.2| DEHA2F24068p [Debaryomyces hansenii CBS767]
Length = 252
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N ++Y GNLD +V E +LY++ IQ + L +P+D+ +G+ F+E+ + + Y
Sbjct: 14 NVKASLYFGNLDPQVTEPLLYELFIQFAPIRSLNLPKDRVLKTHQGYGFIEFRTIKDAEY 73
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSD 132
+ + GI LY + L+ L + N + SS + +++ + D
Sbjct: 74 VLNILRGI-RLYGKMLK--LKKAEPNFKGSSQQSVGVTTTSNAMD 115
>gi|57530169|ref|NP_001006433.1| cleavage stimulation factor subunit 2 [Gallus gallus]
gi|53128673|emb|CAG31323.1| hypothetical protein RCJMB04_5b8 [Gallus gallus]
Length = 475
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|449494200|ref|XP_004159476.1| PREDICTED: uncharacterized protein LOC101225147 [Cucumis sativus]
Length = 527
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GN+ E L +I + G VV + D+ET KPKG+ F EY+ EE A +
Sbjct: 9 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
Query: 93 SGIVTLYNRTLRFALSGQDKNA 114
G + R LR + DK A
Sbjct: 69 QG-YEINGRQLRVDFAENDKGA 89
>gi|297797433|ref|XP_002866601.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
gi|297312436|gb|EFH42860.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 47 LYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLFSG-IVTLYNRTLRF 105
LY + + G+VVD++IPRD+ T +GFAFV Y+ ++ H A++ G +V T++F
Sbjct: 32 LYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERLDGRVVDGREITVQF 91
Query: 106 ALSG 109
A G
Sbjct: 92 AKYG 95
>gi|224488073|sp|A8WLV5.2|EIF3G_CAEBR RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Eukaryotic
translation initiation factor 3 subunit 4
Length = 261
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
M N + + NL +++NE L D+ + GRV+ ++I RDK T PKGFAFV +ES
Sbjct: 173 MERNRSDENTCRVTNLPQEMNEDELRDVFGRIGRVIRIFIARDKITGLPKGFAFVTFESR 232
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALS 108
+ AI + I +Y+ L+ +
Sbjct: 233 DDAARAIAELNDI-RMYHMVLKVEWT 257
>gi|308490983|ref|XP_003107683.1| CRE-CPF-2 protein [Caenorhabditis remanei]
gi|308250552|gb|EFO94504.1| CRE-CPF-2 protein [Caenorhabditis remanei]
Length = 345
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
N S +V++GN+ V E + I +AG V+ + + D+ET KPKG+ F+E+
Sbjct: 13 NERSQRSVFVGNISYDVTEETIRAIFAKAGHVMSIKMVHDRETGKPKGYGFIEFPDINTA 72
Query: 86 HYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTT 122
AI++ +G L R LR + N + T T
Sbjct: 73 DTAIRVLNG-YELGGRVLRVDSAAGGMNMEEFGSTNT 108
>gi|213401655|ref|XP_002171600.1| RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
gi|211999647|gb|EEB05307.1| RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
Length = 234
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+YIGNLD+ +NE + I + G VD+++ RDKET + +GFAF++Y + A+
Sbjct: 33 IYIGNLDKSLNEHDVVRIFSEFGTPVDIHLVRDKETKESRGFAFLKYADQRSTILAVDNM 92
Query: 93 SGIVTLYNRTLR 104
+ V L++R +R
Sbjct: 93 TN-VKLHDRLVR 103
>gi|170078237|ref|YP_001734875.1| RNA-binding protein [Synechococcus sp. PCC 7002]
gi|169885906|gb|ACA99619.1| RNA-binding protein [Synechococcus sp. PCC 7002]
Length = 95
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++YIGNL +V + L + + G+V + +P D+ET +P+GFAFVE SE+ + AI+
Sbjct: 1 MSIYIGNLSYQVTDEDLKETFAEYGKVNRVQVPTDRETGRPRGFAFVEMSSEDEENAAIE 60
Query: 91 LFSG 94
G
Sbjct: 61 ALDG 64
>gi|449446484|ref|XP_004141001.1| PREDICTED: uncharacterized protein LOC101211663 [Cucumis sativus]
Length = 527
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GN+ E L +I + G VV + D+ET KPKG+ F EY+ EE A +
Sbjct: 9 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
Query: 93 SGIVTLYNRTLRFALSGQDKNA 114
G + R LR + DK A
Sbjct: 69 QG-YEINGRQLRVDFAENDKGA 89
>gi|393215896|gb|EJD01387.1| hypothetical protein FOMMEDRAFT_158528 [Fomitiporia mediterranea
MF3/22]
Length = 361
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 18 NKRQIMSGNSNSGCN--------VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETD 69
N+R++ G+S + + ++IG L + E + I Q G V+D+ +PRDKET
Sbjct: 11 NERELELGSSTASWHDEYKDSAYIFIGGLHFDLTEGDVITIFSQYGEVMDVNLPRDKETG 70
Query: 70 KPKGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLR 104
K KGF F+ YE + A+ +G L RTLR
Sbjct: 71 KTKGFGFLMYEDQRSTILAVDNLNGAKVL-ERTLR 104
>gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
++Y+G+LD+ V + LYD+ Q G+VV + + RD T + G+ +V Y +++ AI +
Sbjct: 41 SLYVGDLDQSVTDSQLYDLFNQVGQVVSVRVCRDLSTGRSLGYGYVNYSNQQDATRAIDV 100
Query: 92 FSGIVTLYNRTLRFALSGQD 111
+ L N+T+R ++S +D
Sbjct: 101 LN-FTPLNNKTIRVSVSRRD 119
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 15 VSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGF 74
VS ++R S +G N++I NLD+ ++ + L++ G ++ I D + + KG+
Sbjct: 113 VSVSRRDPTDRKSGAG-NIFIKNLDKSIDIKALHETFSSFGTIISCKIATDA-SGQSKGY 170
Query: 75 AFVEYESEEIGHYAIKLFSGIV 96
FV+Y+SEE AI +G++
Sbjct: 171 GFVQYDSEEAAQTAIDKLNGML 192
>gi|411119198|ref|ZP_11391578.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410711061|gb|EKQ68568.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 104
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
+VY+GNL KV E L + + G+VV + +P+D+ET + +GFAFVE SE AI
Sbjct: 1 MSVYVGNLSFKVTEDDLVETFSEYGKVVSVQLPKDRETGRMRGFAFVEMSSETEEAAAID 60
Query: 91 LFSG 94
G
Sbjct: 61 ALDG 64
>gi|19113271|ref|NP_596479.1| RNA-binding protein Cwf29 [Schizosaccharomyces pombe 972h-]
gi|74676178|sp|O94290.1|IST3_SCHPO RecName: Full=U2 snRNP component ist3; AltName: Full=Complexed with
cdc5 protein 29; AltName: Full=RNA-binding protein cwf29
gi|3850101|emb|CAA21890.1| RNA-binding protein Cwf29 [Schizosaccharomyces pombe]
Length = 217
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+YIGNLD +NE + + + G VD+ + RDKET K KGFAF++YE + A+
Sbjct: 33 IYIGNLDFDLNEDDILCVFSEFGEPVDINLVRDKETGKSKGFAFLKYEDQRSTVLAVDNM 92
Query: 93 SGIVTLYNRTLR 104
+ V L +R +R
Sbjct: 93 TN-VKLLDRLVR 103
>gi|338175402|ref|YP_004652212.1| hypothetical protein PUV_14080 [Parachlamydia acanthamoebae UV-7]
gi|336479760|emb|CCB86358.1| putative uncharacterized protein [Parachlamydia acanthamoebae UV-7]
Length = 111
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL KV + +L + + G+VV + I D+ T K KGF FVE ES E AI+
Sbjct: 5 IFVGNLSWKVTDDILRSVFEKIGKVVSVKIITDQYTGKSKGFGFVEMESSEDADKAIREL 64
Query: 93 SGIVTLYNRTLRFALS 108
+ L +R +R +L+
Sbjct: 65 NETAVL-DRNIRVSLA 79
>gi|391347243|ref|XP_003747874.1| PREDICTED: cleavage stimulation factor subunit 2-like [Metaseiulus
occidentalis]
Length = 422
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 29 SGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
S C+V++GN+ E L I + G VV+ + D+ET KPKG+ F E++ +E A
Sbjct: 16 SACSVFVGNIPYDATEEQLKTIFEEVGPVVNFRLVYDRETGKPKGYGFCEFKDQETAMSA 75
Query: 89 IKLFSGIVTLYNRTLRFALSGQDKNAQ 115
++ + + R LR + ++N +
Sbjct: 76 MRNLNSF-EIGGRALRVDHAASERNKE 101
>gi|426192446|gb|EKV42382.1| hypothetical protein AGABI2DRAFT_195726 [Agaricus bisporus var.
bisporus H97]
Length = 298
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++G L ++E + I Q G ++D+ +PRDKET K KGF FV YE + A+
Sbjct: 34 VFVGGLSYDLSEGDVITIFSQYGEIMDVNLPRDKETGKTKGFGFVMYEDQRSTVLAVDNL 93
Query: 93 SGIVTLYNRTLR 104
+G L RTLR
Sbjct: 94 NGAKVL-ERTLR 104
>gi|339247117|ref|XP_003375192.1| eukaryotic translation initiation factor 3 subunit G [Trichinella
spiralis]
gi|316971502|gb|EFV55261.1| eukaryotic translation initiation factor 3 subunit G [Trichinella
spiralis]
Length = 297
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
V + NL E +++ VL ++ Q G+VV LY+ RDK T + KG+AFV Y S AI
Sbjct: 207 TVRVTNLPEDISDVVLKELFSQVGKVVRLYLARDKVTQRCKGYAFVSYMSRADAQKAIDE 266
Query: 92 FSG 94
SG
Sbjct: 267 LSG 269
>gi|392578419|gb|EIW71547.1| hypothetical protein TREMEDRAFT_56482 [Tremella mesenterica DSM
1558]
Length = 223
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 29 SGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
SG VY+GNL + L D +Q G+V+D + +D+ET + +GF FV + + E +
Sbjct: 2 SGAKVYVGNLSWNTTDDTLRDAFMQFGQVLDSIVMKDRETGRSRGFGFVTFSTAEEAEIS 61
Query: 89 IK 90
I+
Sbjct: 62 IQ 63
>gi|443694236|gb|ELT95429.1| hypothetical protein CAPTEDRAFT_160825 [Capitella teleta]
Length = 548
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + +E L ++ QAG V+ + D+ET KPKG+ F EY+ E A++
Sbjct: 25 SVFVGNIPYEASEEQLKEVFQQAGPVISFRLVYDRETGKPKGYGFCEYQDVETAQSAMRN 84
Query: 92 FSGIVTLYN-RTLRFAL-SGQDKNAQNSSMTTT 122
+ YN R LR + +G+ +N SM
Sbjct: 85 LNNYD--YNGRPLRVGVAAGEQSKDENKSMQQA 115
>gi|427738497|ref|YP_007058041.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
gi|427373538|gb|AFY57494.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
Length = 95
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+GNL +V++ L ++ + G V + IP D+ET + +GFAFVE ESE AI+
Sbjct: 3 IYVGNLSYEVSQEGLNEVFAEYGTVKRVQIPTDRETGRVRGFAFVEMESEADEEKAIEAL 62
Query: 93 SGIVTLYNRTLR 104
G RTL+
Sbjct: 63 DG-AEWMERTLK 73
>gi|294464377|gb|ADE77701.1| unknown [Picea sitchensis]
Length = 299
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
VYIGNL VNE +L ++ + G ++D I D+ET + +GF F+ + ++ A+
Sbjct: 218 VYIGNLSWDVNEEILNEVFSEHGNLLDAKIVFDRETGRSRGFGFITFSTQSEAEAAVASL 277
Query: 93 SGIVTLYNRTLRFALSGQDKNAQ 115
+G L R +R L+ +N +
Sbjct: 278 NG-KELEGRAMRVDLALSSRNIE 299
>gi|392595814|gb|EIW85137.1| polyadenylate binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 683
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
N++I NLDE+++ + L+D + G V+ + D E + KG+ FV YE+ E AIK
Sbjct: 134 NIFIKNLDEQIDNKALHDTFVAFGNVLSCKVATD-EQGRSKGYGFVHYETAEAAETAIKA 192
Query: 92 FSGIV 96
+G++
Sbjct: 193 VNGML 197
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 11/110 (10%)
Query: 2 VPSPKHSFVPNDVVSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLY 61
P+P ++ P +S S ++Y+G LD V E ++++I G V +
Sbjct: 26 APTPSYNLPPQTSIS----------SAPSASLYVGELDPTVTEAMIFEIFNMIGPVASIR 75
Query: 62 IPRDKETDKPKGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLRFALSGQD 111
+ RD T + G+A+V Y + G A++ + + R R S +D
Sbjct: 76 VCRDAVTRRSLGYAYVNYLNTADGERALEQLN-YSLIKGRPCRIMWSQRD 124
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
N+YI NLD +V + ++ + G V + D E + KGF FV YES E A+
Sbjct: 227 NLYIKNLDTEVTQEEFEELFNRYGSVTSAIVQVDDE-GRSKGFGFVNYESHEEAQAAV 283
>gi|282890465|ref|ZP_06298988.1| hypothetical protein pah_c022o030 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499462|gb|EFB41758.1| hypothetical protein pah_c022o030 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 113
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL KV + +L + + G+VV + I D+ T K KGF FVE ES E AI+
Sbjct: 7 IFVGNLSWKVTDDILRSVFEKIGKVVSVKIITDQYTGKSKGFGFVEMESSEDADKAIREL 66
Query: 93 SGIVTLYNRTLRFALS 108
+ L +R +R +L+
Sbjct: 67 NETAVL-DRNIRVSLA 81
>gi|255725032|ref|XP_002547445.1| hypothetical protein CTRG_01752 [Candida tropicalis MYA-3404]
gi|240135336|gb|EER34890.1| hypothetical protein CTRG_01752 [Candida tropicalis MYA-3404]
Length = 257
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 19 KRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVE 78
KRQ NS ++Y GN+D + +E ++Y++ IQ G + L +P+D+ +G+ FVE
Sbjct: 6 KRQ-TDAERNSNASLYFGNIDPQADEILMYELFIQFGPIKSLNMPKDRILKTHQGYGFVE 64
Query: 79 YESEEIGHYAIKLFSGIVTLYNRTLRF 105
+ + + Y + + G V L+ + L+
Sbjct: 65 FRNIDDAKYTLDILRG-VRLFGKALKL 90
>gi|75908205|ref|YP_322501.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|75701930|gb|ABA21606.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 109
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
++YIGNL +V E L + G+V + +P D+ET +P+GFAFVE E+E AI+
Sbjct: 2 SIYIGNLSYQVTEEDLKLAFAEYGKVSRVQLPTDRETGRPRGFAFVEMETEAQETAAIEA 61
Query: 92 FSG 94
G
Sbjct: 62 LDG 64
>gi|344302677|gb|EGW32951.1| hypothetical protein SPAPADRAFT_150389 [Spathaspora passalidarum
NRRL Y-27907]
Length = 256
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 20 RQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY 79
R++ + N +Y GN+D + E ++Y++ IQ G V + +P+D+ +G+ FVE+
Sbjct: 18 RKLQDSDRNPNATLYFGNIDPRATELLMYELFIQFGPVRSINMPKDRILRTHQGYGFVEF 77
Query: 80 ESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMP 137
S + Y + + G V LY + ++ + ++S T R + ++ V +P
Sbjct: 78 RSSKDAEYVLDILRG-VRLYGKLVKLK---KVDGKESSKRTQIGREGRGNVTESVVLP 131
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 22 IMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYES 81
++ G + G ++I NL+E V+E+ L D + G ++ I + + K GFAF+ Y+S
Sbjct: 129 VLPGYVDVGAKLFINNLNELVDEKFLSDTFGKFGTLIQTPIVKRDDEGKSLGFAFLNYDS 188
Query: 82 EEIGHYAIKLFSGIVTL 98
AI+ +G++ +
Sbjct: 189 FNSSDLAIEKMNGVILM 205
>gi|297800520|ref|XP_002868144.1| hypothetical protein ARALYDRAFT_493257 [Arabidopsis lyrata subsp.
lyrata]
gi|297313980|gb|EFH44403.1| hypothetical protein ARALYDRAFT_493257 [Arabidopsis lyrata subsp.
lyrata]
Length = 547
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++G+L+++ E+ + +I +Q GRV D+Y+ RD E + +G FV+Y S+E AI
Sbjct: 220 LFVGSLNKQATEKEVEEIFLQFGRVEDVYLMRD-EYRQSRGCGFVKYSSKETAMAAIDGL 278
Query: 93 SGIVTL--YNRTL--RFALSGQDKNAQNSSMTT 121
+G T+ N+ L RFA + K ++ MT
Sbjct: 279 NGTYTMRGCNQPLIVRFADPKRPKPGESRDMTA 311
>gi|302422014|ref|XP_003008837.1| nuclear polyadenylated RNA-binding protein [Verticillium albo-atrum
VaMs.102]
gi|261351983|gb|EEY14411.1| nuclear polyadenylated RNA-binding protein [Verticillium albo-atrum
VaMs.102]
Length = 473
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 6 KHSFVPNDVVSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRD 65
K F+ ++ KR I +++G + ++ ++ D Q GRVVD + D
Sbjct: 107 KEHFLDGKIID-PKRAIPRDEQEKTSKIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMD 165
Query: 66 KETDKPKGFAFVEYESEE 83
K+T +P+GF FV +ESEE
Sbjct: 166 KDTGRPRGFGFVTFESEE 183
>gi|221060330|ref|XP_002260810.1| spliceosome-associated protein [Plasmodium knowlesi strain H]
gi|193810884|emb|CAQ42782.1| spliceosome-associated protein, putative [Plasmodium knowlesi
strain H]
Length = 514
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G N++IGNLD +V+E++L+DI G+VV + I R+ E D +G F+ Y++ E AI
Sbjct: 161 GANLFIGNLDAEVDEKMLFDIFSSFGQVVTVRIIRN-EDDTSRGHGFISYDNFESSDMAI 219
Query: 90 K 90
+
Sbjct: 220 E 220
>gi|281207156|gb|EFA81339.1| hypothetical protein PPL_05322 [Polysphondylium pallidum PN500]
Length = 1665
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 32 NVY---IGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
NVY +GN+ E+ L DI + GRVV + D++T KPKG+ F EY +E A
Sbjct: 2 NVYGGLVGNIPYDATEKELIDIFSEVGRVVSFRMVEDRDTKKPKGYGFCEYLDQETAQSA 61
Query: 89 IKLFSGIVTLYNRTLRFALSGQDK 112
I+ + L R LR + + +K
Sbjct: 62 IRNLNN-RELNKRNLRVSYADNEK 84
>gi|195401044|ref|XP_002059124.1| GJ16219 [Drosophila virilis]
gi|194155998|gb|EDW71182.1| GJ16219 [Drosophila virilis]
Length = 249
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++ NLDE+V E +LY++ +QAG + IP D T + + F FV Y+ + +A++L+
Sbjct: 76 LFCNNLDERVTEEILYEVFLQAGPIESARIPLDN-TGRQRNFGFVTYQHKCAVPFAMELY 134
Query: 93 SGIVTLYNRTL 103
G+ + L
Sbjct: 135 QGLELFQKKVL 145
>gi|452822647|gb|EME29664.1| RNA-binding protein [Galdieria sulphuraria]
Length = 187
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL ++ E L + Q G + D+++ RD++T K KGFAF+ YE + A+ F
Sbjct: 37 IFVGNLPFELTEGDLLVVFEQYGHIADVHLVRDQDTGKSKGFAFIGYEDQRSTILAVDNF 96
Query: 93 SGIVTLYNRTLR 104
+G V L RTLR
Sbjct: 97 NGTVLL-GRTLR 107
>gi|193598819|ref|XP_001951232.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Acyrthosiphon pisum]
gi|328706164|ref|XP_003243012.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Acyrthosiphon pisum]
Length = 386
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G V+ + D+ET KPKG+ F EY+ +E A++
Sbjct: 13 SVFVGNIPYEATEEKLKDIFSEVGPVISFKLVYDRETGKPKGYGFCEYKDQETALSAMRN 72
Query: 92 FSGIVTLYNRTLRF 105
+G + RTLR
Sbjct: 73 LNG-YEIGGRTLRV 85
>gi|328953013|ref|YP_004370347.1| RNP-1 like RNA-binding protein [Desulfobacca acetoxidans DSM
11109]
gi|328453337|gb|AEB09166.1| RNP-1 like RNA-binding protein [Desulfobacca acetoxidans DSM
11109]
Length = 109
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
+Y+GNL +++E L D+ +AG VV I D++T P+GF FVE E++ G AI
Sbjct: 3 MKLYVGNLPHQMSESELQDLFSEAGYVVSAKIITDRQTGLPRGFGFVEMETKAEGAKAIS 62
Query: 91 LFSG 94
+ +G
Sbjct: 63 MING 66
>gi|156081724|ref|XP_001608355.1| mRNA processing protein [Plasmodium vivax Sal-1]
gi|148800926|gb|EDL42331.1| mRNA processing protein, putative [Plasmodium vivax]
Length = 721
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
S S +++IGN+ V ER L++IL + G+VV + I D + + KGFAF EY+ E
Sbjct: 3 SKSNYSLWIGNIPFDVTERELHEILSKVGQVVSVRIKYDVDKNISKGFAFCEYKDLETCM 62
Query: 87 YAIKLFSGIVTLYNRTLRF 105
A+K +G L R LR
Sbjct: 63 LALKYINGY-ELKGRKLRL 80
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 11 PNDVVSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDK 70
PN+ + + S ++IG+L V E +Y+ Q G V + +P D++T
Sbjct: 274 PNEAAEKRAKVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGA 333
Query: 71 PKGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLR--FALSGQD 111
PKGF +V++ S E A+K +G + R +R FA QD
Sbjct: 334 PKGFGYVQFSSVEDASAALKAMNG-AEIAGRAIRVDFAPPKQD 375
Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 34/77 (44%)
Query: 14 VVSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKG 73
V K + G + NV++G L V+ L G VV + D+++ K +G
Sbjct: 177 VAPAKKARADDGEEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRG 236
Query: 74 FAFVEYESEEIGHYAIK 90
F +VE+ E AI+
Sbjct: 237 FGYVEFADLEASAKAIE 253
>gi|312371125|gb|EFR19385.1| hypothetical protein AND_22609 [Anopheles darlingi]
Length = 377
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GN+ E L +I + G V+ + + D+ET KPKG+ F EY+ +E A++
Sbjct: 18 VFVGNIPYDATEEALKEIFCEVGLVMSMKLVYDRETGKPKGYGFCEYKDKETALSAMRNL 77
Query: 93 SGIVTLYNRTLR 104
+G V R LR
Sbjct: 78 NGYV-FGGRPLR 88
>gi|148237346|ref|NP_001084981.1| RNA-binding motif protein, X chromosome [Xenopus laevis]
gi|82236857|sp|Q6IRQ4.1|RBMX_XENLA RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G
gi|47682580|gb|AAH70649.1| MGC82187 protein [Xenopus laevis]
Length = 370
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
++IG L+ + NE+ L + + GRVV++ + +D+ET+K +GFAFV +ES A +
Sbjct: 9 KLFIGGLNTETNEKALEAVFCKYGRVVEVLLMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 92 FSGIV 96
+G
Sbjct: 69 LNGKA 73
>gi|425440323|ref|ZP_18820628.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9717]
gi|389719274|emb|CCH96866.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9717]
Length = 97
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++++GNL ++++ L D+ + G+V ++IP DKET + +GFAFVE ES+ AI+
Sbjct: 1 MSIFVGNLSYEISQEDLVDVFAEYGKVKRVHIPLDKETQRKRGFAFVEMESKAQEAAAIE 60
Query: 91 LFSG 94
G
Sbjct: 61 ALDG 64
>gi|391347296|ref|XP_003747900.1| PREDICTED: uncharacterized protein LOC100907905 [Metaseiulus
occidentalis]
Length = 162
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL E V+E +LY++ +QAG + + + + P F FV Y+ EE YAI LF
Sbjct: 8 LWVGNLSENVDEDLLYELFLQAGPLQTVTVKKPANGQNP--FGFVTYQHEESVAYAIVLF 65
Query: 93 SGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKS--RSDPVPMPVNGMEISHHSMRI 150
G TL+ R L + + + + L R+ R D +SH
Sbjct: 66 EG-TTLFGRVLNMRERSANPDGKYKRLMADYLRDRERSHRED--------RRVSHPPRDF 116
Query: 151 SVPRHYSSEEP 161
PR++ S P
Sbjct: 117 DRPRYHDSPRP 127
>gi|443899731|dbj|GAC77060.1| nuclear localization sequence binding protein, partial [Pseudozyma
antarctica T-34]
Length = 400
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 13 DVVSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPK 72
DV ++ S ++IGNL ++E +++ + G V + +P+D ++ +PK
Sbjct: 284 DVTDNRAKKFNDQRSAPSSTLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPK 343
Query: 73 GFAFVEYESEEIGHYAIKLFSGIVTLYNRTLRFALS 108
GF +VE+ ++E AI +G L R LR S
Sbjct: 344 GFGYVEFAAQESAQAAIDAMTG-QELAGRPLRLDFS 378
>gi|422295618|gb|EKU22917.1| u2 snrnp component ist3 [Nannochloropsis gaditana CCMP526]
Length = 121
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 25 GNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEI 84
G V++G+L +++E + ++ Q G + DL++ RDK T K KGFAF++YE +
Sbjct: 28 GQYKDSAWVFVGSLPSQLSEGDVLCVMSQWGEIEDLHLVRDKGTGKSKGFAFLKYEDQRS 87
Query: 85 GHYAIKLFSGIVTLYNRTLR 104
A+ +GI L RTLR
Sbjct: 88 TILAVDNMNGI-KLLERTLR 106
>gi|443328242|ref|ZP_21056842.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
gi|442792088|gb|ELS01575.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
Length = 92
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+GNL ++N+ L ++ + G V ++IP D+ET + +GFAFVE ESE AI
Sbjct: 3 IYVGNLAYEINQEDLNEVFAEYGTVKRVHIPTDRETGRVRGFAFVEMESESDEDKAIAAL 62
Query: 93 SGIVTLYNRTLRFALSGQDKNAQNS 117
G R+L+ + +N +NS
Sbjct: 63 DG-AEWMERSLKVNKARPRENNRNS 86
>gi|345562877|gb|EGX45885.1| hypothetical protein AOL_s00112g74 [Arthrobotrys oligospora ATCC
24927]
Length = 280
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+IGN+ ++E + DI + G+V+ + D++T KPKGF F EY EI A++
Sbjct: 11 AFIGNIPYGLSEEQIVDIFSKVGQVLSFRLVYDRDTGKPKGFGFAEYADAEIAASAVRNL 70
Query: 93 SGIVTLYNRTLRFALSGQ-DKNAQN 116
+ R LR S + DK+AQ+
Sbjct: 71 DNF-EIMGRKLRVDFSHEGDKDAQD 94
>gi|348667221|gb|EGZ07047.1| hypothetical protein PHYSODRAFT_251824 [Phytophthora sojae]
Length = 419
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ V E +L +I +AG VV+ + D+ET KPKG+ F EY A++
Sbjct: 14 SVFVGNIPYDVTEDMLKEIFSEAGSVVNFRLVTDRETGKPKGYGFCEYADGATALSAMRN 73
Query: 92 FSGIVTLYNRTLRFALS-GQDKNA 114
+G + R LR + G DK+
Sbjct: 74 LNG-YEINGRNLRVDFADGGDKSG 96
>gi|307591599|ref|YP_003900398.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306986453|gb|ADN18332.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 109
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+GNL +V ++ L ++ G+V ++IP D+ET + +GFAFVE E+ E+ AI
Sbjct: 3 IYVGNLAFEVEDKHLSEVFSDYGKVTRVHIPTDRETGQRRGFAFVEMETAEMEDAAISAL 62
Query: 93 SG 94
G
Sbjct: 63 DG 64
>gi|67923265|ref|ZP_00516750.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|67854891|gb|EAM50165.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
Length = 94
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++Y+GNL VN+ L ++ + G V ++IP+D+E+ + +GFAFVE +S++ AI
Sbjct: 1 MSIYVGNLSYDVNKEDLEEVFTEYGSVKRVHIPKDRESGRMRGFAFVEMDSDDQEQEAIS 60
Query: 91 LFSGIVTLYNRTLR 104
G + RTL+
Sbjct: 61 TLDGAEWM-GRTLK 73
>gi|406926747|gb|EKD62896.1| RNA-binding protein [uncultured bacterium]
Length = 134
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+Y+GNL V L + +AG VVD + K+T + KGF FVE E+EE AI+
Sbjct: 4 KLYVGNLSYTVTSDELRKLFAEAGTVVDAVVISFKDTGRSKGFGFVEMETEEAAKAAIEK 63
Query: 92 FSG 94
F+G
Sbjct: 64 FNG 66
>gi|443328827|ref|ZP_21057420.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
gi|442791563|gb|ELS01057.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
Length = 95
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++YIGNL +VN+ L ++ + G V +++P D+ET + +GFAFVE ESE AI
Sbjct: 1 MSIYIGNLSYEVNQEDLNEVFTEYGTVKRVHVPTDRETGRVRGFAFVEMESEADEDKAIA 60
Query: 91 LFSGIVTLYNRTLR 104
G +R L+
Sbjct: 61 ALDG-AEWMDRELK 73
>gi|416401897|ref|ZP_11687293.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|357261987|gb|EHJ11191.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 94
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++Y+GNL VN+ L ++ + G V ++IP+D+E+ + +GFAFVE +S++ AI
Sbjct: 1 MSIYVGNLSYDVNKEDLEEVFTEYGSVKRVHIPKDRESGRVRGFAFVEMDSDDQEQEAIS 60
Query: 91 LFSGIVTLYNRTLR 104
G RTL+
Sbjct: 61 TLDG-AEWMGRTLK 73
>gi|221054940|ref|XP_002258609.1| mrna processing protein [Plasmodium knowlesi strain H]
gi|193808678|emb|CAQ39381.1| mrna processing protein, putative [Plasmodium knowlesi strain H]
Length = 820
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
S S +++IGN+ V ER L D+L + G VV + I D E + KGFAF EY+ E
Sbjct: 3 SKSNYSLWIGNIPFDVTERELDDVLSRVGEVVSVRIKYDIEKNISKGFAFCEYKDLETCM 62
Query: 87 YAIKLFSGIVTLYNRTLRFALSGQD 111
A+K +G L R LR + ++
Sbjct: 63 LALKYING-YELKGRKLRLYWANEE 86
>gi|186682695|ref|YP_001865891.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186465147|gb|ACC80948.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 104
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
++Y+GNL +V E L + G V + +P D+ET +P+GFAFVE ES+ AI
Sbjct: 2 SIYVGNLSYQVTEEDLKQAFAEYGTVSRVQLPTDRETGRPRGFAFVEMESDTQEQAAIDA 61
Query: 92 FSG 94
G
Sbjct: 62 LDG 64
>gi|440802763|gb|ELR23692.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 425
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
SG + + NV++GNL E ++ L Q G V + I D+ET +P+GF + E+E
Sbjct: 275 QSGEAATDGNVFLGNLSFNSTEDSIWAALEQFGTVKAVRIVYDRETQRPRGFGYCEFEDA 334
Query: 83 EIGHYAIKLFSGIVTLYNRTLR 104
+ + AI SG V + R +R
Sbjct: 335 DTANKAIAA-SGTVDVDGRQIR 355
>gi|341900113|gb|EGT56048.1| hypothetical protein CAEBREN_07157 [Caenorhabditis brenneri]
Length = 452
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 20 RQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY 79
RQI S+ + NL +++NE L D+ + GRV+ ++I RDK T PKGFAFV +
Sbjct: 189 RQIDRNRSDEN-TCRVTNLPQEMNEDELRDVFGKIGRVIRIFIARDKITALPKGFAFVTF 247
Query: 80 ESEEIGHYAIKLFSGI 95
ES + AI + I
Sbjct: 248 ESRDDAARAIAELNDI 263
>gi|329669018|gb|AEB96397.1| cleavage stimulation factor subunit 2 [Angiostrongylus cantonensis]
Length = 97
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
VY+GN+ + E + + QAGRV ++ I D+ET +PKGF F E+ E A+
Sbjct: 20 VYVGNIPYQTTEDAIGNHFSQAGRVTNVRIVYDRETGRPKGFGFCEFSDEAGAQNAVNTL 79
Query: 93 SGIVTLYN-RTLR 104
+G T +N R+LR
Sbjct: 80 NG--TDFNGRSLR 90
>gi|317142960|ref|XP_003189459.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus oryzae
RIB40]
Length = 531
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 19 KRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVE 78
KR I +++G + ++ NE+ +Q GRVVD + DK+T +P+GF FV
Sbjct: 183 KRAIPRDEQEKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVT 242
Query: 79 YESE 82
++SE
Sbjct: 243 FDSE 246
>gi|195497709|ref|XP_002096214.1| GE25546 [Drosophila yakuba]
gi|194182315|gb|EDW95926.1| GE25546 [Drosophila yakuba]
Length = 414
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFV 77
+K Q S S +V++GN+ + E L +I + G V+ L + D+E+ KPKGF F
Sbjct: 3 DKAQEQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFC 62
Query: 78 EYESEEIGHYAIKLFSGIVTLYNRTLRF 105
EY+ +E A++ +G + RTLR
Sbjct: 63 EYKDQETALSAMRNLNG-YEIGGRTLRV 89
>gi|169774677|ref|XP_001821806.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Aspergillus oryzae
RIB40]
gi|238496735|ref|XP_002379603.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Aspergillus flavus NRRL3357]
gi|83769669|dbj|BAE59804.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220694483|gb|EED50827.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Aspergillus flavus NRRL3357]
gi|391869782|gb|EIT78975.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Aspergillus oryzae
3.042]
Length = 153
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 10/112 (8%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKP------KGFAF 76
MS + C VY+G LD+ V + L + + G VVD+ +P+ D P +GF +
Sbjct: 1 MSEAARLKCTVYVGGLDQAVTVQTLAEAFVPFGEVVDITLPK---PDVPNSNELHRGFGY 57
Query: 77 VEYESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRK 128
VE+E E AI G LY RT++ A + K++ + T + ++
Sbjct: 58 VEFEVPEDAKEAIDNMDG-SELYGRTIKVAAAKPQKDSNEGLGSKTAIWEQE 108
>gi|119485430|ref|ZP_01619758.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119457186|gb|EAW38312.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 100
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
+VY+GNL +V E L + + G V + IP D+ET +P+GFAFVE +++ AI+
Sbjct: 1 MSVYVGNLSYQVTEEDLRSVFAEYGTVKQVSIPTDRETGRPRGFAFVEMDADTQEQAAIE 60
Query: 91 LFSG 94
G
Sbjct: 61 KLDG 64
>gi|405120315|gb|AFR95086.1| hypothetical protein CNAG_01060 [Cryptococcus neoformans var.
grubii H99]
Length = 260
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 63/145 (43%), Gaps = 26/145 (17%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
+N G N+++ L V ER L D+ Q G+V + I D + + +GF FV ES E
Sbjct: 66 ANQGNNLHVSGLSRAVTERQLEDLFSQIGKVAKVQIMVDPHSQESRGFGFVMMESREEAQ 125
Query: 87 YAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEIS-- 144
AI SG +N + S+T ++R+ P P +G++
Sbjct: 126 AAIDQLSG-----------------QNVEGKSITVAHARRGRART-PTPGRYHGVKADSR 167
Query: 145 -HHSM--RISVPRHYSS---EEPPP 163
HHS R PR Y S + PPP
Sbjct: 168 PHHSSYDRPYQPRSYDSRYYDRPPP 192
>gi|391863705|gb|EIT73005.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 545
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 19 KRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVE 78
KR I +++G + ++ NE+ +Q GRVVD + DK+T +P+GF FV
Sbjct: 171 KRAIPRDEQEKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVT 230
Query: 79 YESE 82
++SE
Sbjct: 231 FDSE 234
>gi|195145742|ref|XP_002013849.1| GL24357 [Drosophila persimilis]
gi|194102792|gb|EDW24835.1| GL24357 [Drosophila persimilis]
Length = 418
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFV 77
+K Q S S +V++GN+ + E L +I + G V+ L + D+E+ KPKGF F
Sbjct: 3 DKLQEQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFC 62
Query: 78 EYESEEIGHYAIKLFSGIVTLYNRTLRF 105
EY+ +E A++ +G + RTLR
Sbjct: 63 EYKDQETALSAMRNLNG-YEIGGRTLRV 89
>gi|452823093|gb|EME30106.1| RNA-binding protein [Galdieria sulphuraria]
Length = 477
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 29 SGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
S CN+++ + ++ +L ++ + G+++ + DK T + KGF FV Y + H A
Sbjct: 389 SECNLFVYGIPPDWDDAMLANLFLPFGKLLSSNVFIDKRTQRSKGFGFVSYAYPDSAHMA 448
Query: 89 IKLFSGIVTLYNRTLRFALSGQDKNAQNS 117
I + +G+ RTL+ +L ++KN NS
Sbjct: 449 IAMLNGMTLPNGRTLKVSLK-KEKNDNNS 476
Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPR----DKETDKPKGFAFVEYESEEIGHYA 88
+YIG+L+ V E+ L + + G +VD+ I R D + + P + FVE+ E A
Sbjct: 130 LYIGHLEPIVEEQQLRNAFTKFGEIVDVNIVRPRNVDNQHNSPYNYGFVEFSGNEAADNA 189
Query: 89 I 89
I
Sbjct: 190 I 190
>gi|268563939|ref|XP_002647049.1| C. briggsae CBR-CPF-2 protein [Caenorhabditis briggsae]
Length = 335
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 20 RQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY 79
+Q + S +V++GN+ V E + I +AG V+ + + D+ET KPKG+ F+E+
Sbjct: 1 KQQGQASERSQRSVFVGNISYDVTEETIRQIFTKAGHVLSIKMVHDRETGKPKGYGFIEF 60
Query: 80 ESEEIGHYAIKLFSGIVTLYNRTLR 104
AI++ +G L R LR
Sbjct: 61 PDIATADTAIRVLNG-YELGGRVLR 84
>gi|317142958|ref|XP_001819217.2| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus oryzae
RIB40]
Length = 557
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 19 KRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVE 78
KR I +++G + ++ NE+ +Q GRVVD + DK+T +P+GF FV
Sbjct: 183 KRAIPRDEQEKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVT 242
Query: 79 YESE 82
++SE
Sbjct: 243 FDSE 246
>gi|157137809|ref|XP_001664044.1| RNA-binding protein [Aedes aegypti]
gi|108869641|gb|EAT33866.1| AAEL013869-PA [Aedes aegypti]
Length = 399
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G V+ L + D+E+ KPKG+ F EY+ +E A++
Sbjct: 15 SVFVGNIPYEATEEKLKDIFCEVGPVISLKLVFDRESGKPKGYGFCEYKDQETALSAMRN 74
Query: 92 FSGIVTLYNRTLR 104
+G + R LR
Sbjct: 75 LNG-YEIGGRALR 86
>gi|346979364|gb|EGY22816.1| RNA-binding protein [Verticillium dahliae VdLs.17]
Length = 306
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 16/118 (13%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GN+ ++E + DI AG+V++ + D+ET +PKGF F EY + A++
Sbjct: 9 VFVGNIPYGLSEEQITDIFSSAGKVINFRLVYDRETGRPKGFGFAEYPDHDSAASAVRNL 68
Query: 93 SGIVTLYNRTLRFALS---GQDKN------------AQNSSMTTTPLSSRKSRSDPVP 135
+ T+ R LR S G D N A N+ T P + + S P+P
Sbjct: 69 NDYETM-GRKLRVDFSNEGGTDDNDFNQGRDGLSFSAPNTYGQTAPAAPQASTLPPLP 125
>gi|294896462|ref|XP_002775569.1| RNA recognition motif containing protein, putative [Perkinsus
marinus ATCC 50983]
gi|239881792|gb|EER07385.1| RNA recognition motif containing protein, putative [Perkinsus
marinus ATCC 50983]
Length = 361
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
M N C+V++GN+ V+E L I G VV + DK T +PKG+ F EY +
Sbjct: 1 MFRQQNRSCSVFVGNVPYDVDEEQLKSIFSTVGPVVSFRLMHDKVTGRPKGYGFCEYADQ 60
Query: 83 EIGHYAIK 90
E + A++
Sbjct: 61 ETAYAAMR 68
>gi|389585768|dbj|GAB68498.1| spliceosome-associated protein 49, partial [Plasmodium cynomolgi
strain B]
Length = 229
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G N++IGNLD +V+E++L+DI G+VV + I R+ E D KG F+ Y++ E AI
Sbjct: 106 GANLFIGNLDAEVDEKMLFDIFSSFGQVVTVRIIRN-EDDTSKGHGFISYDNFESSDMAI 164
Query: 90 K 90
+
Sbjct: 165 E 165
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N+ +YI NLD +V+E +L ++ +Q G V +++IPRDK G+ FVEYE E Y
Sbjct: 17 NNEATLYIANLDAQVDEEILCELFMQCGNVKNVHIPRDKINGFHAGYGFVEYEYEYECEY 76
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A K+ + + L+ + LR + QDK
Sbjct: 77 AGKVLN-MTKLFGKPLRCNKASQDK 100
>gi|359495190|ref|XP_002264617.2| PREDICTED: uncharacterized protein LOC100256296 [Vitis vinifera]
gi|297739347|emb|CBI29337.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GN+ E L I + G VV + D+ET KPKG+ F EY+ EE A +
Sbjct: 9 VFVGNIPYDATEEQLIQICEEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
Query: 93 SGIVTLYNRTLRFALSGQDKNA 114
G + R LR + DK A
Sbjct: 69 QGY-EINGRQLRVDFAENDKGA 89
>gi|412988957|emb|CCO15548.1| predicted protein [Bathycoccus prasinos]
Length = 247
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYAI 89
NV++GNLD +++E++LYD G V+ + RD E+ + +GF FV+++S E AI
Sbjct: 44 ANVFVGNLDAEIDEKMLYDTFSAFGSVITAPKVQRDPESGESRGFGFVQFDSFEASDRAI 103
Query: 90 KLFSG 94
+ G
Sbjct: 104 EAMHG 108
>gi|195395200|ref|XP_002056224.1| GJ10336 [Drosophila virilis]
gi|194142933|gb|EDW59336.1| GJ10336 [Drosophila virilis]
Length = 427
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFV 77
+K Q S S +V++GN+ + E L +I + G V+ L + D+E+ KPKGF F
Sbjct: 3 DKAQEQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFC 62
Query: 78 EYESEEIGHYAIKLFSGIVTLYNRTLRF 105
EY+ +E A++ +G + RTLR
Sbjct: 63 EYKDQETALSAMRNLNG-YEIGGRTLRV 89
>gi|427726014|ref|YP_007073291.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
gi|427357734|gb|AFY40457.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
Length = 100
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++YIGNL +V E L D+ G V + IP D+ET +P+GFAFVE +E AI+
Sbjct: 1 MSIYIGNLSYEVTEDDLRDVFADYGTVKRVQIPTDRETSRPRGFAFVEMSKDEEELAAIE 60
Query: 91 LFSG 94
G
Sbjct: 61 ALDG 64
>gi|28557621|gb|AAO45216.1| RE27227p [Drosophila melanogaster]
Length = 437
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFV 77
+K Q S S +V++GN+ + E L +I + G V+ L + D+E+ KPKGF F
Sbjct: 3 DKAQEQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFC 62
Query: 78 EYESEEIGHYAIKLFSGIVTLYNRTLRF 105
EY+ +E A++ +G + RTLR
Sbjct: 63 EYKDQETALSAMRNLNG-YEIGGRTLRV 89
>gi|380798461|gb|AFE71106.1| peptidyl-prolyl cis-trans isomerase E isoform 1, partial [Macaca
mulatta]
gi|380798463|gb|AFE71107.1| peptidyl-prolyl cis-trans isomerase E isoform 1, partial [Macaca
mulatta]
Length = 290
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 37 NLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLFSGIV 96
L E+V+++VL+ I G + D+ IP D ET+K +GFAFVE+E E AI +
Sbjct: 1 GLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNE-S 59
Query: 97 TLYNRTLRFALS 108
L+ RT+R L+
Sbjct: 60 ELFGRTIRVNLA 71
>gi|125774537|ref|XP_001358527.1| GA20525 [Drosophila pseudoobscura pseudoobscura]
gi|54638266|gb|EAL27668.1| GA20525 [Drosophila pseudoobscura pseudoobscura]
Length = 418
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFV 77
+K Q S S +V++GN+ + E L +I + G V+ L + D+E+ KPKGF F
Sbjct: 3 DKLQEQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFC 62
Query: 78 EYESEEIGHYAIKLFSGIVTLYNRTLRF 105
EY+ +E A++ +G + RTLR
Sbjct: 63 EYKDQETALSAMRNLNG-YEIGGRTLRV 89
>gi|62896707|dbj|BAD96294.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant variant [Homo sapiens]
Length = 616
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++G++ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGSIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQN 116
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|194900156|ref|XP_001979623.1| GG22991 [Drosophila erecta]
gi|190651326|gb|EDV48581.1| GG22991 [Drosophila erecta]
Length = 416
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFV 77
+K Q S S +V++GN+ + E L +I + G V+ L + D+E+ KPKGF F
Sbjct: 3 DKAQEQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFC 62
Query: 78 EYESEEIGHYAIKLFSGIVTLYNRTLR 104
EY+ +E A++ +G + RTLR
Sbjct: 63 EYKDQETALSAMRNLNG-YEIGGRTLR 88
>gi|119490270|ref|ZP_01622783.1| RNA binding protein [Lyngbya sp. PCC 8106]
gi|119454156|gb|EAW35309.1| RNA binding protein [Lyngbya sp. PCC 8106]
Length = 105
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+VYIGNL V+E L + + G V + IP D+ET +P+GFAFVE +S+ AI+
Sbjct: 2 SVYIGNLSYDVSEEDLKSVFAEYGTVRRVQIPTDRETGRPRGFAFVEMDSDSEEEAAIEA 61
Query: 92 FSG 94
G
Sbjct: 62 LDG 64
>gi|409079599|gb|EKM79960.1| hypothetical protein AGABI1DRAFT_113205 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 298
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++G L ++E + I Q G ++D+ +PRDKET K KGF FV YE + A+
Sbjct: 34 IFVGGLSYDLSEGDVITIFSQYGEIMDVNLPRDKETGKTKGFGFVMYEDQRSTVLAVDNL 93
Query: 93 SGIVTLYNRTLR 104
+G L RTLR
Sbjct: 94 NGAKVL-ERTLR 104
>gi|344241215|gb|EGV97318.1| Cleavage stimulation factor 64 kDa subunit, tau variant [Cricetulus
griseus]
Length = 645
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQ 115
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|354474899|ref|XP_003499667.1| PREDICTED: cleavage stimulation factor subunit 2 [Cricetulus
griseus]
gi|344238061|gb|EGV94164.1| Cleavage stimulation factor 64 kDa subunit [Cricetulus griseus]
Length = 558
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V +GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVCVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKN 113
+G R LR + +KN
Sbjct: 77 LNG-REFSGRALRVDNAASEKN 97
>gi|238501964|ref|XP_002382216.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus flavus
NRRL3357]
gi|83767075|dbj|BAE57215.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692453|gb|EED48800.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus flavus
NRRL3357]
Length = 445
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 19 KRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVE 78
KR I +++G + ++ NE+ +Q GRVVD + DK+T +P+GF FV
Sbjct: 71 KRAIPRDEQEKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVT 130
Query: 79 YESEEIGHYAI 89
++SE A+
Sbjct: 131 FDSEAAVEAAL 141
>gi|17232175|ref|NP_488723.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|6274493|gb|AAF06670.1|AF196328_2 RbpD [Nostoc sp. PCC 7120]
gi|1064777|dbj|BAA08402.1| RNA-binding protein [Anabaena variabilis]
gi|17133820|dbj|BAB76382.1| RNA-binding protein [Nostoc sp. PCC 7120]
Length = 110
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
++YIGNL +V E L + G+V + +P D+ET +P+GFAFVE E+E AI+
Sbjct: 2 SIYIGNLSYQVTEEDLKLAFAEYGKVSRVQLPTDRETGRPRGFAFVEMETEAQETAAIEA 61
Query: 92 FSG 94
G
Sbjct: 62 LDG 64
>gi|195343246|ref|XP_002038209.1| GM17877 [Drosophila sechellia]
gi|194133059|gb|EDW54627.1| GM17877 [Drosophila sechellia]
Length = 419
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFV 77
+K Q S S +V++GN+ + E L +I + G V+ L + D+E+ KPKGF F
Sbjct: 3 DKAQEQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFC 62
Query: 78 EYESEEIGHYAIKLFSGIVTLYNRTLRF 105
EY+ +E A++ +G + RTLR
Sbjct: 63 EYKDQETALSAMRNLNG-YEIGGRTLRV 89
>gi|321464394|gb|EFX75402.1| hypothetical protein DAPPUDRAFT_323316 [Daphnia pulex]
Length = 249
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
C +Y G+L KV E +L+++ +QAG + + IP+ + + K F FVEY+ E YAI+
Sbjct: 6 CTIYCGSLSPKVTEEILHELFLQAGPLKCVKIPKTPQGES-KLFGFVEYQHECSVDYAIQ 64
Query: 91 LFSGIVTLYNRTLRF 105
LF TL+ + L+
Sbjct: 65 LFHH-TTLFGQELQL 78
>gi|167537650|ref|XP_001750493.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771033|gb|EDQ84707.1| predicted protein [Monosiga brevicollis MX1]
Length = 382
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 10 VPNDVVSRNKRQIMSGNSNSGCN--------VYIGNLDEKVNERVLYDILIQAGRVVDLY 61
V ++ N+R++ G + + +YIG LD + E + + Q G D+
Sbjct: 3 VVREIQKLNERELSQGGAGKSWHDVYADSAYIYIGGLDYRFTEGDVLSVFSQYGEPTDIN 62
Query: 62 IPRDKETDKPKGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLRFALSGQ 110
+ RDK++ K KGF F+ YE + A+ F+G V L RT+R G+
Sbjct: 63 LVRDKDSGKSKGFCFLAYEDQRSTILAVDNFNG-VKLAGRTIRVDHCGE 110
>gi|115400789|ref|XP_001215983.1| hypothetical protein ATEG_06805 [Aspergillus terreus NIH2624]
gi|114191649|gb|EAU33349.1| hypothetical protein ATEG_06805 [Aspergillus terreus NIH2624]
Length = 454
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 19 KRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVE 78
KR I +++G + ++ NE+ +Q GRVVD + DK+T +P+GF FV
Sbjct: 71 KRAIPRDEQEKTSKIFVGGVSQEANEQDFKSFFMQFGRVVDATLMIDKDTGRPRGFGFVT 130
Query: 79 YESEEIGHYAI 89
++SE A+
Sbjct: 131 FDSEAAVEAAL 141
>gi|195569859|ref|XP_002102926.1| GD19237 [Drosophila simulans]
gi|194198853|gb|EDX12429.1| GD19237 [Drosophila simulans]
Length = 419
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFV 77
+K Q S S +V++GN+ + E L +I + G V+ L + D+E+ KPKGF F
Sbjct: 3 DKAQEQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFC 62
Query: 78 EYESEEIGHYAIKLFSGIVTLYNRTLR 104
EY+ +E A++ +G + RTLR
Sbjct: 63 EYKDQETALSAMRNLNG-YEIGGRTLR 88
>gi|387219601|gb|AFJ69509.1| hypothetical protein NGATSA_3028200 [Nannochloropsis gaditana
CCMP526]
Length = 134
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
VY+G LDE+ E +L+ I G +V++ IP+D + + +GF FV +ES E AI
Sbjct: 14 VYVGGLDEQCTEEMLHAAFIPFGDIVEVNIPKDFKENTTRGFGFVHFESAEDAAAAIDNM 73
Query: 93 SGIVTLYNRTLR 104
G L R L+
Sbjct: 74 EG-AELLGRVLK 84
>gi|390601583|gb|EIN10977.1| hypothetical protein PUNSTDRAFT_63827 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 315
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 13/111 (11%)
Query: 7 HSFVPNDVVSR----NKRQIMSGNSNSGCN--------VYIGNLDEKVNERVLYDILIQA 54
H + N VV N+R++ G S + + +YIG L+ ++ E + I Q
Sbjct: 15 HILLCNSVVREINKINQRELDLGLSGASWHDEYKDSAYIYIGGLNYELTEGDIITIFSQY 74
Query: 55 GRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLRF 105
G +D+ + RDKET K KGFAF+ YE + A+ +G L NRTLR
Sbjct: 75 GEPLDVNLVRDKETGKSKGFAFLMYEDQRSTVLAVDNLNGAQVL-NRTLRV 124
>gi|193671655|ref|XP_001946102.1| PREDICTED: cleavage stimulation factor subunit 2-like
[Acyrthosiphon pisum]
Length = 388
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GN+ + E L DI + G V+ + D+ET KPKG+ F EY+ +E A++
Sbjct: 14 VFVGNIPYEATEEKLKDIFNEVGPVISFKLVYDRETGKPKGYGFCEYKDQETALSAMRNL 73
Query: 93 SGIVTLYNRTLRF--ALSGQDKNAQNSSMTTTPLS 125
+G + RTLR A + + + S M P S
Sbjct: 74 NG-YEIGGRTLRVDNACTEKSRLEMQSLMMGMPTS 107
>gi|17137710|ref|NP_477453.1| cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|5713194|gb|AAD47839.1|AF170082_1 cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|23171661|gb|AAF55577.2| cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|205360993|gb|ACI03573.1| FI01908p [Drosophila melanogaster]
Length = 419
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFV 77
+K Q S S +V++GN+ + E L +I + G V+ L + D+E+ KPKGF F
Sbjct: 3 DKAQEQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFC 62
Query: 78 EYESEEIGHYAIKLFSGIVTLYNRTLRF 105
EY+ +E A++ +G + RTLR
Sbjct: 63 EYKDQETALSAMRNLNG-YEIGGRTLRV 89
>gi|301100496|ref|XP_002899338.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104255|gb|EEY62307.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 414
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ V E +L +I +AG V++ + D+ET KPKG+ F EY A++
Sbjct: 14 SVFVGNIPYDVTEDMLKEIFSEAGSVMNFRLVTDRETGKPKGYGFCEYADGATALSAMRN 73
Query: 92 FSGIVTLYNRTLR--FALSGQDKNA 114
+G + R LR FA G N+
Sbjct: 74 LNG-YEINGRNLRVDFADGGDKSNS 97
>gi|162454265|ref|YP_001616632.1| RNA-binding protein [Sorangium cellulosum So ce56]
gi|161164847|emb|CAN96152.1| RNA-binding protein [Sorangium cellulosum So ce56]
Length = 138
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G +Y+GNL L AG V ++ +P D+ET +P+GFAFV S + + AI
Sbjct: 2 GNRLYVGNLSFSTTRETLESAFAAAGEVREIAMPTDRETGQPRGFAFVTMGSAQAANSAI 61
Query: 90 KLFSGIVTLYNRTLR 104
+G V L R L+
Sbjct: 62 SQLNGAV-LDGRALK 75
>gi|68073863|ref|XP_678846.1| spliceosome-associated protein [Plasmodium berghei strain ANKA]
gi|56499442|emb|CAH97651.1| spliceosome-associated protein, putative [Plasmodium berghei]
Length = 366
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G N++IGNLD +V E++L+DI G+V+ + I R+ E D KG F+ Y++ E AI
Sbjct: 106 GANLFIGNLDTEVEEKMLFDIFSSFGQVISVKIVRN-EDDTSKGHGFISYDNFESSDLAI 164
Query: 90 K 90
+
Sbjct: 165 E 165
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N+ +YI NLD +V+E +L ++ +Q G V +++IPRDK G+ FVEYE E Y
Sbjct: 17 NNEATLYIANLDAQVDEEILCELFMQCGNVKNVHIPRDKINGFHLGYGFVEYEYEYECEY 76
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A K+ + + L+ + LR + QDK
Sbjct: 77 AGKVLN-MTRLFGKPLRCNKATQDK 100
>gi|297710828|ref|XP_002832064.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 [Pongo
abelii]
Length = 1051
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++G L+ K +E+ L + GR++ +++ +D+ET+K +GFAFV +ES A +
Sbjct: 10 LFVGGLNLKTDEKALKAEFGKYGRIIKVFLMKDRETNKSRGFAFVTFESPADAKAAARDM 69
Query: 93 SGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSR 130
+G L ++++ A + + + + TP SS +SR
Sbjct: 70 NGKC-LDGKSIKVAQAIKQAFKNSRWVPPTPGSSGRSR 106
>gi|449299689|gb|EMC95702.1| hypothetical protein BAUCODRAFT_34465 [Baudoinia compniacensis UAMH
10762]
Length = 337
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
M+ G V+IGN+ V+E + +I + G VV + DKET+KPKGF F+EY
Sbjct: 1 MAQREKGGRVVFIGNIPYGVSEEQICEIFGRVGNVVSFRLVYDKETNKPKGFGFLEYTDV 60
Query: 83 EIGHYAIKLFSGIVTLYNRTLR 104
+ A++ + + RTLR
Sbjct: 61 DAAASAVRNLNEFEVM-GRTLR 81
>gi|413925481|gb|AFW65413.1| hypothetical protein ZEAMMB73_461561 [Zea mays]
Length = 624
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GN+ E L I + G VV + DKET KPKG+ F EY+ EE A +
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 93 SGIVTLYNRTLR--FALSGQDKN 113
G + R LR FA SG++ +
Sbjct: 73 QGY-EINGRQLRVDFAESGRNTD 94
>gi|34810648|pdb|1P1T|A Chain A, Nmr Structure Of The N-Terminal Rrm Domain Of Cleavage
Stimulation Factor 64 Kda Subunit
Length = 104
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 10 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 69
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQ 115
+G R LR + +KN +
Sbjct: 70 LNG-REFSGRALRVDNAASEKNKE 92
>gi|163916618|gb|AAI57793.1| LOC100135403 protein [Xenopus (Silurana) tropicalis]
Length = 375
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
++IG L+ + NE+ L + + GRVV++ + +D+ET+K +GFAFV +ES A +
Sbjct: 9 KLFIGGLNTETNEKALEAVFCKYGRVVEVLLMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 92 FSG 94
+G
Sbjct: 69 LNG 71
>gi|66814070|ref|XP_641214.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60469249|gb|EAL67244.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 541
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GN+ + NE+ L +I G+VV + DK++ K KG+ F EYE+ + AI+ +
Sbjct: 5 VFVGNIPYEANEKDLIEIFSGVGKVVSFRLLEDKDSKKSKGYGFCEYENVDNALSAIRNY 64
Query: 93 SGIVTLYNRTLRFALSGQDK 112
+ T NR LR + + +K
Sbjct: 65 M-LFTFGNRVLRVSYADNEK 83
>gi|427706332|ref|YP_007048709.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427358837|gb|AFY41559.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 110
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
++Y+GNL +V E L + G+V + +P D+ET +P+GFAFVE E+E AI+
Sbjct: 2 SIYVGNLSYQVTEEDLKMAFSEYGKVSRVQLPTDRETGRPRGFAFVEMETESQETAAIEA 61
Query: 92 FSG 94
G
Sbjct: 62 LDG 64
>gi|37520960|ref|NP_924337.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
gi|35211955|dbj|BAC89332.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
Length = 122
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++GNL E+ + + + G V + IP D+ET +P+GFAFV+ ESE AI
Sbjct: 3 LFVGNLPFSATEQEIVEAFTEYGEVKSVKIPMDRETGRPRGFAFVDLESETAEQAAIDDL 62
Query: 93 SGIVTLYNRTLR 104
G T NR +R
Sbjct: 63 DG-ATWNNREIR 73
>gi|158292144|ref|XP_313699.3| AGAP004414-PA [Anopheles gambiae str. PEST]
gi|157017295|gb|EAA09129.3| AGAP004414-PA [Anopheles gambiae str. PEST]
Length = 390
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GN+ E L +I + G V+ + + D+ET KPKG+ F EY+ +E A++
Sbjct: 18 VFVGNIPYDATEEALKEIFCEVGLVLSMKLVYDRETGKPKGYGFCEYKDKETALSAMRNL 77
Query: 93 SGIVTLYNRTLR 104
+G V R LR
Sbjct: 78 NGYV-FGGRPLR 88
>gi|440635199|gb|ELR05118.1| hypothetical protein GMDG_07160 [Geomyces destructans 20631-21]
Length = 318
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E + DI AG+VV+ + D+ET +PKGF F EY + A++
Sbjct: 9 SVFVGNIPYGLTEEQIIDIFSSAGKVVNFRLVYDRETGRPKGFGFAEYPDSDSAASAVRN 68
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQNSSMT 120
+ + NR LR S + S+ T
Sbjct: 69 LND-YEIMNRKLRVDFSNDGAEDETSAPT 96
>gi|395527150|ref|XP_003765714.1| PREDICTED: putative RNA-binding protein 11 [Sarcophilus harrisii]
Length = 250
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 16/83 (19%)
Query: 33 VYIGNLDEKVNERVLYDIL--------------IQAGRVVDLYIPRDKETDKPKGFAFVE 78
V++GNL+ +V E +LY++ +QAG + + I +DKE KPK F FV
Sbjct: 13 VFVGNLETRVREEILYELFLQPQELRAQESVCSLQAGPLTRVTICKDKE-GKPKPFGFVC 71
Query: 79 YESEEIGHYAIKLFSGIVTLYNR 101
++ +E YAI L +GI LY R
Sbjct: 72 FKHQESVSYAIALLNGI-RLYGR 93
>gi|388582029|gb|EIM22335.1| hypothetical protein WALSEDRAFT_56985 [Wallemia sebi CBS 633.66]
Length = 218
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
VYIG L + E + IL Q G + D+ +P+DK T K +GFAFV YE + A+
Sbjct: 34 VYIGGLVTGLTEGDVITILSQFGEIADINMPKDKATGKSRGFAFVMYEDQRSTVLAVDNL 93
Query: 93 SGIVTLYNRTLR 104
+G T+ RTLR
Sbjct: 94 NG-STVLGRTLR 104
>gi|195037535|ref|XP_001990216.1| GH18352 [Drosophila grimshawi]
gi|193894412|gb|EDV93278.1| GH18352 [Drosophila grimshawi]
Length = 430
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFV 77
+K Q S S +V++GN+ + E L +I + G V+ L + D+E+ KPKGF F
Sbjct: 3 DKAQEQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFC 62
Query: 78 EYESEEIGHYAIKLFSGIVTLYNRTLR 104
EY+ +E A++ +G + RTLR
Sbjct: 63 EYKDQETALSAMRNLNG-YEIGGRTLR 88
>gi|119608862|gb|EAW88456.1| RNA binding motif protein, X-linked, isoform CRA_b [Homo sapiens]
Length = 221
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
++IG L+ + NE+ L + + GR+V++ + +D+ET+K +GFAFV +ES A +
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 92 FSG 94
+G
Sbjct: 69 MNG 71
>gi|443323178|ref|ZP_21052187.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
gi|442787088|gb|ELR96812.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
Length = 95
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+GNL+ KV + L D+ + G V ++IP D++T + +GFAFVE E+E AI
Sbjct: 3 IYVGNLNYKVTDSDLNDVFAEYGTVKRVHIPTDRDTGRARGFAFVEMETEAEEDAAITAL 62
Query: 93 SG 94
G
Sbjct: 63 DG 64
>gi|428308134|ref|YP_007144959.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428249669|gb|AFZ15449.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 113
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+GNL +V E L + + G V + +P D+ET +P+GFAFVE ++E+ + AI+
Sbjct: 3 IYVGNLSYEVTEDDLNSVFAEYGTVKRVNLPNDRETGRPRGFAFVEMQTEDQENAAIEAL 62
Query: 93 SG 94
G
Sbjct: 63 DG 64
>gi|406867619|gb|EKD20657.1| RNA recognition motif containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 339
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E + I AG+V++ + D+ET +PKGF FVE+ + A++
Sbjct: 8 SVFVGNIPYGLTEEQIIRIFSTAGKVLNFRLVYDRETGRPKGFGFVEFPDSDSAASAVRN 67
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLS-SRKSRSDPVPMPVNGMEISHHSMRI 150
+ + NR LR S N ++S PL+ + P+ MP NG + S
Sbjct: 68 LND-HEIMNRKLRVDFSNDGDNGDDNS---APLNYQHQPPPMPIAMPSNG--YAAPSPLE 121
Query: 151 SVPRHYSSEEPP-PPGVTL 168
PR S PP P GV L
Sbjct: 122 GPPRGAPSSIPPLPLGVEL 140
>gi|70952960|ref|XP_745612.1| mRNA processing protein [Plasmodium chabaudi chabaudi]
gi|56525991|emb|CAH82321.1| mRNA processing protein, putative [Plasmodium chabaudi chabaudi]
Length = 694
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
S S C+++IGN+ ++E+ L +IL + G VV + I D + + KGFAF EY+ E
Sbjct: 3 SKSNCSLWIGNIPFDLSEKELQEILSRVGEVVSVRIKYDIDKNVSKGFAFCEYKDLETCM 62
Query: 87 YAIKLFSG 94
A+K +G
Sbjct: 63 LALKYLNG 70
>gi|313238973|emb|CBY13961.1| unnamed protein product [Oikopleura dioica]
Length = 315
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G L E+V+E++++ I G ++D+ +P D ET+ +GFAFVEY +E G A +
Sbjct: 9 LYVGGLAEEVDEKMVHAAFIPFGDIIDITVPLDFETEAHRGFAFVEY--KETGDAASAMD 66
Query: 93 S-GIVTLYNRTLR 104
+ L+ RTL+
Sbjct: 67 NMDDAELFGRTLK 79
>gi|121715928|ref|XP_001275573.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Aspergillus clavatus NRRL 1]
gi|119403730|gb|EAW14147.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Aspergillus clavatus NRRL 1]
Length = 152
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDK---ETDKPKGFAFVEY 79
MS + C VY+G LD+ V + L + + G VVD+ +P+ TD +GF +VE+
Sbjct: 1 MSEKARLKCTVYVGGLDQAVTVQTLAEAFVPFGEVVDITLPKPDVPNSTDLHRGFGYVEF 60
Query: 80 ESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRK 128
+ + AI G LY RT++ A + K + + T + ++
Sbjct: 61 DLPQDAAEAIDNMDG-SELYGRTIKVAAAKPQKESNEGLGSKTAIWEQE 108
>gi|338720869|ref|XP_001498616.3| PREDICTED: putative RNA-binding protein 11-like [Equus caballus]
Length = 234
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 16/122 (13%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+++IG ++ +V E +LY + +QAG + + + +D+E KPK F FV ++ E YAI L
Sbjct: 9 SIFIG-VETRVLEGILYRVFLQAGPLTKVTLCKDRE-GKPKSFGFVCFKHPESVSYAIAL 66
Query: 92 FSGIVTLYNRTL----RFALSGQDKNAQNSSMTTTPLSSRKSRSD--------PVP-MPV 138
+GI LY R + RF S + A S + ++S R++ PVP P+
Sbjct: 67 LNGI-RLYGRPINVQYRFGSSRSSEPANQSFESCVKINSHSYRNEEGASRSCFPVPFFPI 125
Query: 139 NG 140
N
Sbjct: 126 NA 127
>gi|343427935|emb|CBQ71460.1| related to NSR1-nuclear localization sequence binding protein
[Sporisorium reilianum SRZ2]
Length = 459
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 13 DVVSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPK 72
DV ++ S ++IGNL ++E +++ + G V + +P+D ++ +PK
Sbjct: 288 DVTENRAKKFNDQRSAPSSTLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPK 347
Query: 73 GFAFVEYESEEIGHYAIKLFSGIVTLYNRTLRFALS 108
GF +VE+ ++E A+ +G L R LR S
Sbjct: 348 GFGYVEFAAQESAQAALDAMTG-QELAGRPLRLDFS 382
>gi|432099499|gb|ELK28647.1| Heterogeneous nuclear ribonucleoprotein G-like 1 [Myotis davidii]
Length = 535
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
++IG L+ + NE+ L + + GR+V++ + +D+ET+K +GFAFV +ES A +
Sbjct: 178 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 237
Query: 92 FSG 94
+G
Sbjct: 238 MNG 240
>gi|195108753|ref|XP_001998957.1| GI23336 [Drosophila mojavensis]
gi|193915551|gb|EDW14418.1| GI23336 [Drosophila mojavensis]
Length = 428
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFV 77
+K Q S S +V++GN+ + E L +I + G V+ L + D+E+ KPKGF F
Sbjct: 3 DKAQEQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFC 62
Query: 78 EYESEEIGHYAIKLFSGIVTLYNRTLR 104
EY+ +E A++ +G + RTLR
Sbjct: 63 EYKDQETALSAMRNLNG-YEIGGRTLR 88
>gi|353230162|emb|CCD76333.1| putative nucleotide binding protein 2 (nbp 2) [Schistosoma mansoni]
Length = 264
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 13/104 (12%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+GN++ ++ +LY++ +QAG + + + K+T FAFV +E EE YA LF
Sbjct: 7 IYVGNINPRITADILYELFLQAGPLEGVTV---KDT-----FAFVTFEDEESVPYACSLF 58
Query: 93 SGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSR---KSRSDP 133
GI TLY LR Q+ Q+ + + P S+ + R DP
Sbjct: 59 EGI-TLYGTELRIR-PRQNSKFQDLKIRSVPPSAYQFFRPRVDP 100
>gi|323455941|gb|EGB11808.1| hypothetical protein AURANDRAFT_9375, partial [Aureococcus
anophagefferens]
Length = 79
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
GC +Y+GN+ + ++ L + G+V D ++P ++ET +P+GFAFV + S AI
Sbjct: 1 GCKLYVGNISFDMTQQDLNGLFGPYGKVTDAFLPTERETGRPRGFAFVTFSSPAEAQAAI 60
Query: 90 KLFSGIVTLYNRTLRFALS 108
G + R LR +S
Sbjct: 61 ADLDG-KEIDGRALRVNVS 78
>gi|259489992|ref|NP_001159130.1| hypothetical protein [Zea mays]
gi|223942157|gb|ACN25162.1| unknown [Zea mays]
gi|413925479|gb|AFW65411.1| hypothetical protein ZEAMMB73_461561 [Zea mays]
Length = 499
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GN+ E L I + G VV + DKET KPKG+ F EY+ EE A +
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 93 SGIVTLYNRTLR--FALSGQDKN 113
G + R LR FA SG++ +
Sbjct: 73 QGY-EINGRQLRVDFAESGRNTD 94
>gi|241997552|ref|XP_002433425.1| RNA recognition motif-containing protein [Ixodes scapularis]
gi|215490848|gb|EEC00489.1| RNA recognition motif-containing protein [Ixodes scapularis]
Length = 466
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 22 IMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYES 81
++S S +V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+
Sbjct: 7 VLSAAERSVRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKD 66
Query: 82 EEIGHYAIKLFSGIVTLYNRTLR 104
+E A++ + L R LR
Sbjct: 67 QETALSAMRNLNAF-DLNGRPLR 88
>gi|194743216|ref|XP_001954096.1| GF16912 [Drosophila ananassae]
gi|190627133|gb|EDV42657.1| GF16912 [Drosophila ananassae]
Length = 415
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 18 NKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFV 77
+K Q S S +V++GN+ + E L +I + G V+ L + D+E+ KPKGF F
Sbjct: 3 DKAQEQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFC 62
Query: 78 EYESEEIGHYAIKLFSGIVTLYNRTLR 104
EY+ +E A++ +G + RTLR
Sbjct: 63 EYKDQETALSAMRNLNG-YEIGGRTLR 88
>gi|218185350|gb|EEC67777.1| hypothetical protein OsI_35315 [Oryza sativa Indica Group]
Length = 495
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GN+ E L I + G VV + DKET KPKG+ F EY+ EE A +
Sbjct: 14 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 73
Query: 93 SGIVTLYNRTLRFALSGQDKNA 114
G + R LR + +NA
Sbjct: 74 QG-YEINGRQLRVDFAENGRNA 94
>gi|427798067|gb|JAA64485.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15, partial [Rhipicephalus pulchellus]
Length = 377
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 22 IMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYES 81
++S S +V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+
Sbjct: 7 VLSAAERSVRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKD 66
Query: 82 EEIGHYAIKLFSGIVTLYNRTLRFALSGQDKNAQ-----NSSMTTTPLSS 126
+E A++ + L R LR + +K+ + +S+ P+ S
Sbjct: 67 QETALSAMRNLNAF-DLNGRPLRVDNAASEKSKEELKNLQASLGGPPIES 115
>gi|307202383|gb|EFN81811.1| Cleavage stimulation factor 64 kDa subunit [Harpegnathos saltator]
Length = 439
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G V+ + D+ET KPKG+ F EY+ +E A++
Sbjct: 18 SVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 77
Query: 92 FSGIVTLYNRTLRF 105
+G + RTLR
Sbjct: 78 LNG-YEIGGRTLRV 90
>gi|407925101|gb|EKG18122.1| hypothetical protein MPH_04654 [Macrophomina phaseolina MS6]
Length = 152
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDK---ETDKPKGFAFVEY 79
MS + VY+G LD +VN R L+D + G +VD+ +P+ TD +GF +VE+
Sbjct: 1 MSETARLKATVYVGGLDNQVNTRTLHDAFVPFGEIVDISLPKPDLPSSTDPHRGFGYVEF 60
Query: 80 ESEEIGHYAIKLFSGIVTLYNRTLRFALSGQDKNA 114
E AI L+ R ++ A + K+A
Sbjct: 61 EHASDAREAIDNMD-QSELFGRVIKVAAAKPQKDA 94
>gi|115484443|ref|NP_001065883.1| Os11g0176100 [Oryza sativa Japonica Group]
gi|62733690|gb|AAX95801.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa Japonica Group]
gi|77548917|gb|ABA91714.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113644587|dbj|BAF27728.1| Os11g0176100 [Oryza sativa Japonica Group]
gi|215695427|dbj|BAG90666.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222615613|gb|EEE51745.1| hypothetical protein OsJ_33161 [Oryza sativa Japonica Group]
Length = 495
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GN+ E L I + G VV + DKET KPKG+ F EY+ EE A +
Sbjct: 14 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 73
Query: 93 SGIVTLYNRTLRFALSGQDKNA 114
G + R LR + +NA
Sbjct: 74 QGY-EINGRQLRVDFAENGRNA 94
>gi|162450147|ref|YP_001612514.1| RNA-binding protein [Sorangium cellulosum So ce56]
gi|161160729|emb|CAN92034.1| RNA-binding protein [Sorangium cellulosum So ce56]
Length = 95
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G +Y+GNL L AG V ++ +P D+ET +P+GFAFV + + + AI
Sbjct: 2 GNRLYVGNLSFNTTRETLESAFAAAGEVREIAMPTDRETGQPRGFAFVTMGTAQAANSAI 61
Query: 90 KLFSGIVTLYNRTLR 104
+G + L RTL+
Sbjct: 62 SQLNGAM-LDGRTLK 75
>gi|42768806|gb|AAS45603.1| sex-lethal [Bradysia coprophila]
Length = 289
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 12 NDVVSRNKRQIMS-----GNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDK 66
N V RNKR +S G N+Y+ NL + E L +I + G +V I RDK
Sbjct: 137 NGVTVRNKRLKVSYARPAGEELKETNLYVTNLPRTITEEQLDEIFGKYGLIVQKNILRDK 196
Query: 67 ETDKPKGFAFVEYESEEIGHYAIKLFSGIV 96
T KP+G AF+ Y E AI + ++
Sbjct: 197 MTGKPRGVAFIRYNKREEAQEAIAALNNVI 226
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
++G +NSG N+ + L + + +R Y + G + I RD +T G+ FV Y +E
Sbjct: 67 LTGCNNSGTNLIVNYLPQDMTDREFYALFSTTGPIESSRIMRDFKTCYSFGYGFVNYLTE 126
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFAL---SGQDKNAQNSSMTTTPLSSRKSRSDPV 134
E AIK +G VT+ N+ L+ + +G++ N +T P + + + D +
Sbjct: 127 EGAQRAIKSLNG-VTVRNKRLKVSYARPAGEELKETNLYVTNLPRTITEEQLDEI 180
>gi|325972386|ref|YP_004248577.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
gi|324027624|gb|ADY14383.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
Length = 95
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+GN+ + E LY + Q G V+ I D++T++PKGFAFVE + + AI
Sbjct: 5 IYVGNMSYQTTEEALYSLFAQYGDVMSARIIMDRDTNRPKGFAFVEMDDDSAAVAAISQL 64
Query: 93 SG 94
G
Sbjct: 65 DG 66
>gi|340369320|ref|XP_003383196.1| PREDICTED: hypothetical protein LOC100639137 [Amphimedon
queenslandica]
Length = 295
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++IG LD + E + + Q G +V++ + RDK+T K KGF F+ YE + A+ F
Sbjct: 32 IFIGGLDYDLTEGDVLSVFSQYGEIVNINLVRDKKTGKSKGFCFIGYEDQRSTILAVDNF 91
Query: 93 SGIVTLYNRTLR 104
+GI L R++R
Sbjct: 92 NGI-KLCGRSIR 102
>gi|156367093|ref|XP_001627254.1| predicted protein [Nematostella vectensis]
gi|156214158|gb|EDO35154.1| predicted protein [Nematostella vectensis]
Length = 139
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
C YIGNLD KVNE L D + VVD+ + D+ET +P+GFAFV + S++ AI
Sbjct: 5 CKCYIGNLDFKVNEADLQDRFSRYD-VVDVQVISDRETQRPRGFAFVTFGSKKNMEDAIN 63
Query: 91 LFSG 94
G
Sbjct: 64 ELDG 67
>gi|119492303|ref|ZP_01623650.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119453188|gb|EAW34355.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 101
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++Y+GNL +V E L + + G V + IP D+ET +P+GFAFVE + E AI+
Sbjct: 1 MSIYVGNLSYEVTEEDLKSVFAEYGTVQRVSIPTDRETGRPRGFAFVEMQEESKEDAAIE 60
Query: 91 LFSG 94
G
Sbjct: 61 ALDG 64
>gi|440684571|ref|YP_007159366.1| putative transcriptional regulator [Anabaena cylindrica PCC 7122]
gi|428681690|gb|AFZ60456.1| putative transcriptional regulator [Anabaena cylindrica PCC 7122]
Length = 604
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%)
Query: 24 SGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
S +++ ++IGN+D +E+ L + Q G + D+Y+P+D+ T K +GFA VE+E E
Sbjct: 518 SNDTSDYAKIFIGNVDFNADEQDLETLFSQFGEISDVYLPKDRMTGKSRGFAIVEFEQLE 577
Query: 84 IGHYAIK 90
A++
Sbjct: 578 SAKKALE 584
>gi|259155082|ref|NP_001158783.1| Heterogeneous nuclear ribonucleoprotein G [Salmo salar]
gi|223647384|gb|ACN10450.1| Heterogeneous nuclear ribonucleoprotein G [Salmo salar]
Length = 290
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
++IG LD + NE+ L + GR+V++ + +D+ET+K +GFAFV +ES A +
Sbjct: 9 KLFIGGLDTETNEKALEKHFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 92 FSG 94
+G
Sbjct: 69 MNG 71
>gi|195452858|ref|XP_002073531.1| GK14167 [Drosophila willistoni]
gi|194169616|gb|EDW84517.1| GK14167 [Drosophila willistoni]
Length = 401
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L +I + G V+ L + D+E+ KPKGF F EY+ +E A++
Sbjct: 18 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 77
Query: 92 FSGIVTLYNRTLR 104
+G + RTLR
Sbjct: 78 LNG-YEIGGRTLR 89
>gi|42768810|gb|AAS45605.1| sex-lethal [Trichomegalosphys pubescens]
Length = 292
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 12 NDVVSRNKRQIMS-----GNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDK 66
N V RNKR +S G N+Y+ NL + E L +I + G +V I RDK
Sbjct: 140 NGVTVRNKRLKVSFARPAGEEIKETNLYVTNLPRTITEEQLDEIFGKYGLIVQKNILRDK 199
Query: 67 ETDKPKGFAFVEYESEEIGHYAIKLFSGIV 96
T KP+G AF+ Y E AI + ++
Sbjct: 200 MTGKPRGVAFIRYNKREEAQEAIAALNNVI 229
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
++G +NSG N+ + L + + +R Y + G + I RD +T G+ FV Y +E
Sbjct: 70 LTGCNNSGTNLIVNYLPQDMTDREFYSLFSTMGPIESSRIMRDFKTCYSFGYGFVNYLTE 129
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFAL---SGQDKNAQNSSMTTTPLSSRKSRSDPV 134
E AIK +G VT+ N+ L+ + +G++ N +T P + + + D +
Sbjct: 130 EGAQRAIKSLNG-VTVRNKRLKVSFARPAGEEIKETNLYVTNLPRTITEEQLDEI 183
>gi|170090564|ref|XP_001876504.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647997|gb|EDR12240.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 116
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++G L + E + I Q G V+DL++PRDK+T K KGF F+ YE + A+
Sbjct: 35 VFVGGLHFDLTEGDVITIFSQYGEVMDLHMPRDKDTGKTKGFGFLMYEDQRSTVLAVDNL 94
Query: 93 SGIVTLYNRTLR 104
+G L RTLR
Sbjct: 95 NGAKVL-ERTLR 105
>gi|173421|gb|AAA35320.1| poly(A)-binding protein, partial [Schizosaccharomyces pombe]
Length = 628
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 6 KHSFVPNDVVSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRD 65
K +V + V R ++ + + NVYI NLD ++ E+ D+ Q G + L + +D
Sbjct: 222 KKVYVGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKD 281
Query: 66 KETDKPKGFAFVEYESEEIGHYAI 89
+ DKP+GF FV Y + E A+
Sbjct: 282 -QNDKPRGFGFVNYANHECAQKAV 304
Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
NV+I NLD ++ + L+D G+++ + D E KG+ FV ++S E + AI+
Sbjct: 155 NVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVD-ELGNAKGYGFVHFDSVESANAAIEH 213
Query: 92 FSGIV 96
+G++
Sbjct: 214 VNGML 218
>gi|311952|emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris]
Length = 319
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G +Y+GNL + L +I +AG V ++ I D+ TD+ +GFAFV S E AI
Sbjct: 108 GGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAI 167
Query: 90 KLFSG 94
+LF G
Sbjct: 168 RLFDG 172
>gi|380028061|ref|XP_003697730.1| PREDICTED: cleavage stimulation factor subunit 2-like [Apis florea]
Length = 441
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G V+ + D+ET KPKG+ F EY+ +E A++
Sbjct: 18 SVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 77
Query: 92 FSGIVTLYNRTLR 104
+G + RTLR
Sbjct: 78 LNG-YEIGGRTLR 89
>gi|350401751|ref|XP_003486249.1| PREDICTED: cleavage stimulation factor subunit 2-like [Bombus
impatiens]
Length = 441
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G V+ + D+ET KPKG+ F EY+ +E A++
Sbjct: 18 SVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 77
Query: 92 FSGIVTLYNRTLRF 105
+G + RTLR
Sbjct: 78 LNGY-EIGGRTLRV 90
>gi|27752871|gb|AAO19468.1| sex-lethal [Sciara ocellaris]
Length = 287
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 12 NDVVSRNKRQIMS-----GNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDK 66
N V RNKR +S G N+Y+ NL + E L +I + G +V I RDK
Sbjct: 135 NGVTVRNKRLKVSFARPAGEELKETNLYVTNLPRTITEEQLDEIFGKYGLIVQKNILRDK 194
Query: 67 ETDKPKGFAFVEYESEEIGHYAIKLFSGIV 96
T KP+G AF+ Y E AI + ++
Sbjct: 195 MTGKPRGVAFIRYNKREEAQEAIAALNNVI 224
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
++G + SG N+ + L + + +R Y + +G + I RD +T G+ FV Y +E
Sbjct: 65 LTGCAGSGTNLIVNYLPQDMTDREFYALFSTSGPIESSRIMRDFKTCYSFGYGFVNYLTE 124
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFAL---SGQDKNAQNSSMTTTPLSSRKSRSDPV 134
E AIK +G VT+ N+ L+ + +G++ N +T P + + + D +
Sbjct: 125 EGAQRAIKSLNG-VTVRNKRLKVSFARPAGEELKETNLYVTNLPRTITEEQLDEI 178
>gi|443697196|gb|ELT97731.1| hypothetical protein CAPTEDRAFT_180028 [Capitella teleta]
Length = 205
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++ GNL + + E +LY++ +QAG + + IP++ + + K F F+E+ E YAI+L
Sbjct: 9 IWCGNLPDDITEELLYELFLQAGPLCKVNIPKES-SGRLKRFGFIEFRHSESVPYAIELM 67
Query: 93 SGIVTLYNRTLRF 105
+GI L++ +L+
Sbjct: 68 NGI-KLFDCSLQL 79
>gi|428163795|gb|EKX32848.1| hypothetical protein GUITHDRAFT_120952 [Guillardia theta CCMP2712]
Length = 310
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
VY+GNL V + L + L + G V L + R +D+ KGFA EY +EE AI+
Sbjct: 69 KVYVGNLPISVQDDALKEFLSKVGEVTSLSVKRFPNSDRCKGFAMAEYATEEQAKAAIEQ 128
Query: 92 FSGIVTLYNRTLRFALSGQD 111
+G + L A SG D
Sbjct: 129 LAGSSFMKRSVLVRADSGID 148
>gi|70948340|ref|XP_743694.1| spliceosome-associated protein [Plasmodium chabaudi chabaudi]
gi|56523315|emb|CAH77774.1| spliceosome-associated protein, putative [Plasmodium chabaudi
chabaudi]
Length = 394
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G N++IGNLD +V E++L+DI G+V+ + I R+ E D KG F+ Y++ E AI
Sbjct: 106 GANLFIGNLDTEVEEKMLFDIFSSFGQVISVKIVRN-EDDTSKGHGFISYDNFESSDLAI 164
Query: 90 K 90
+
Sbjct: 165 E 165
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N+ +YI NLD +V+E +L ++ +Q G V +++IPRDK G+ FVEYE E Y
Sbjct: 17 NNEATLYIANLDAQVDEEILCELFMQCGNVKNVHIPRDKINGFHLGYGFVEYEYEYECEY 76
Query: 88 AIKLFSGIVTLYNRTLRFALSGQDK 112
A K+ + + L+ + LR + QDK
Sbjct: 77 AGKVLN-MTRLFGKPLRCNKATQDK 100
>gi|401827248|ref|XP_003887716.1| RNA binding protein [Encephalitozoon hellem ATCC 50504]
gi|392998723|gb|AFM98735.1| RNA binding protein [Encephalitozoon hellem ATCC 50504]
Length = 214
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 29 SGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
SGC++++GN+D +V E + + L GRVV + DK T K +GF F EYES I A
Sbjct: 3 SGCSIFVGNIDFEVPEERIIEELGAVGRVVSFRMVYDKTTGKSRGFGFCEYESPLIVEKA 62
Query: 89 IK 90
++
Sbjct: 63 LQ 64
>gi|171912058|ref|ZP_02927528.1| RNA-binding region RNP-1 [Verrucomicrobium spinosum DSM 4136]
Length = 150
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
+Y+GNL E+ + ++ Q G V ++ +P D++T +P+GFAFV +++E AIK
Sbjct: 3 TKMYVGNLAWSATEQDVRELFSQYGAVTEVSLPTDRDTGRPRGFAFVAMDTKEAMDAAIK 62
Query: 91 LFSGI 95
+G+
Sbjct: 63 GLNGL 67
>gi|268569436|ref|XP_002640522.1| Hypothetical protein CBG18684 [Caenorhabditis briggsae]
Length = 84
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 27 SNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGH 86
S SG ++Y+GN + E+ + D G V ++ I D+ET +P+GFAFVE+ ++
Sbjct: 2 SGSGFSIYVGNAPYQTTEQEMGDFFSSVGTVTNVRIVLDRETGRPRGFAFVEFSEQQSAE 61
Query: 87 YAIKLFSGIVTLYNRTLR 104
A+ +G R LR
Sbjct: 62 RAVNELNG-ADFNGRQLR 78
>gi|356535727|ref|XP_003536395.1| PREDICTED: uncharacterized protein LOC100794399 [Glycine max]
Length = 545
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GN+ E L +I + G VV + D+ET KPKG+ F EY+ EE A +
Sbjct: 11 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 93 SGIVTLYNRTLRFALSGQDK 112
G + R LR + DK
Sbjct: 71 QG-YEINGRQLRVDFAENDK 89
>gi|307172466|gb|EFN63915.1| Cleavage stimulation factor 64 kDa subunit [Camponotus floridanus]
Length = 438
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G V+ + D+ET KPKG+ F EY+ +E A++
Sbjct: 18 SVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 77
Query: 92 FSGIVTLYNRTLR 104
+G + RTLR
Sbjct: 78 LNG-YEIGGRTLR 89
>gi|281212216|gb|EFA86376.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 562
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
N++I NLD+ V+ + LYD G ++ + D ET+ KGF FV YES+E AI
Sbjct: 97 NIFIKNLDKTVDHKALYDTFSAFGNILSCKVVTD-ETNTSKGFGFVHYESQESAEKAIAK 155
Query: 92 FSGIV 96
+G++
Sbjct: 156 VNGMM 160
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI-- 89
NV+I NL E V+E+ L D+L G++ +L I D E K KGF F +E + A+
Sbjct: 187 NVFIKNLSEDVSEQQLTDLLQAHGKITNLCIMTD-EKGKSKGFGFANFEHADAAKGAVEN 245
Query: 90 ---KLFSGIVTLYNRTLR 104
K+FSG V R +
Sbjct: 246 ENGKMFSGKVIYVGRAQK 263
Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 52/135 (38%), Gaps = 13/135 (9%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G N+YI NLD+ ++ L G + + RD + KGF FV Y + + A+
Sbjct: 281 GVNLYIKNLDDSIDSDKLRATFSAYGTITSSKVMRDDKGSSSKGFGFVCYSTPDEASKAV 340
Query: 90 KLFSG--------IVTLYNR--TLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVN 139
G V R R L Q ++S M P+ S + P+ P
Sbjct: 341 AEMHGRMVGSKPLYVAFAQRKDVRRAQLEAQHTKFKSSRM---PVQSIYPPTGPIFYPPA 397
Query: 140 GMEISHHSMRISVPR 154
GM + + M PR
Sbjct: 398 GMPVVYPQMIPRPPR 412
Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 29 SGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
S ++Y+G+L V+E L+++ Q G V +L I RD T + +A++ Y + A
Sbjct: 6 SSSSLYVGDLHPDVSESHLFEVFNQVGPVANLRICRDNTTRRSLSYAYINYHNSTDAERA 65
Query: 89 IKLFSGIVTLYNRTLRFALSGQDKNAQNSSM 119
+ + + + R S +D + + S +
Sbjct: 66 LDTLNN-TPIKGKACRIMWSQRDPSLRKSGI 95
>gi|428214099|ref|YP_007087243.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|428002480|gb|AFY83323.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 104
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
++Y+GNL +V + L + + G V +++P D+ET +P+GFAFVE +SE AI+
Sbjct: 2 SIYVGNLSYEVTQEDLTAVFAEYGSVQRVHLPTDRETGRPRGFAFVEMKSETEETAAIEA 61
Query: 92 FSG 94
G
Sbjct: 62 LDG 64
>gi|396081838|gb|AFN83452.1| cleavage stimulation factor [Encephalitozoon romaleae SJ-2008]
Length = 214
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 29 SGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYA 88
SGC++++GN+D +V E + + L GRVV + DK T K +GF F EYES I A
Sbjct: 3 SGCSIFVGNIDFEVPEERIIEELGAVGRVVSFRMVYDKTTGKSRGFGFCEYESPLIVEKA 62
Query: 89 IK 90
++
Sbjct: 63 LQ 64
>gi|444707906|gb|ELW49054.1| Cleavage stimulation factor subunit 2 tau variant [Tupaia
chinensis]
Length = 654
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQ 115
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|351715564|gb|EHB18483.1| Cleavage stimulation factor 64 kDa subunit, tau variant
[Heterocephalus glaber]
Length = 642
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQ 115
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|66516308|ref|XP_623321.1| PREDICTED: cleavage stimulation factor subunit 2 [Apis mellifera]
Length = 441
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G V+ + D+ET KPKG+ F EY+ +E A++
Sbjct: 18 SVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 77
Query: 92 FSGIVTLYNRTLR 104
+G + RTLR
Sbjct: 78 LNG-YEIGGRTLR 89
>gi|432111364|gb|ELK34639.1| Cleavage stimulation factor subunit 2 tau variant [Myotis davidii]
Length = 641
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQ 115
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|294933049|ref|XP_002780572.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
gi|239890506|gb|EER12367.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
Length = 540
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GNL + + L ++ G + ++P D+ET P+GFA++++++E+ A KL
Sbjct: 402 SVFVGNLPWSMTQEWLSEVFGDCGSITRCFMPTDRETGNPRGFAYIDFDTEDSAEKATKL 461
Query: 92 FSGIVTLYNRTLR 104
SG L R +R
Sbjct: 462 -SG-TDLEGRQIR 472
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
+V++GNL + + L I G + + +P D E+ K KGFAF+++ E+ A+
Sbjct: 295 SVFVGNLPFSMTKEWLEQIFSWCGDIERVSLPTDWESGKIKGFAFLDFADEDSAEKAV 352
>gi|356574567|ref|XP_003555417.1| PREDICTED: uncharacterized protein LOC100806489 [Glycine max]
Length = 544
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GN+ E L +I + G VV + D+ET KPKG+ F EY+ EE A +
Sbjct: 11 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 93 SGIVTLYNRTLRFALSGQDK 112
G + R LR + DK
Sbjct: 71 QG-YEINGRQLRVDFAENDK 89
>gi|169853086|ref|XP_001833224.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|116505602|gb|EAU88497.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 681
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
N++I NLDE ++ + L+D G V+ + D ET + KG+ FV YE+ E AIK
Sbjct: 138 NIFIKNLDEAIDNKALHDTFAAFGTVLSCKVATD-ETGRSKGYGFVHYETAEAAENAIKA 196
Query: 92 FSGIV 96
+G++
Sbjct: 197 VNGML 201
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++Y+G LD V E +L++I G V + + RD T + G+A+V Y + G A++
Sbjct: 49 ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 108
Query: 91 LFSGIVTLYNRTLRFALSGQD 111
+ + NR R S +D
Sbjct: 109 QLN-YSLIKNRPCRIMWSQRD 128
Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 15 VSRNKRQ-IMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKG 73
+SR +RQ + N+Y+ NLD +V + ++ + G V I D+E K KG
Sbjct: 213 ISRKERQSKLEEMRAQFTNLYVKNLDPEVTQDEFIELFKKYGNVTSAVISVDEE-GKSKG 271
Query: 74 FAFVEYESEEIGHYAI 89
F FV +E+ + A+
Sbjct: 272 FGFVNFETHDEAQKAV 287
>gi|449267951|gb|EMC78842.1| Heterogeneous nuclear ribonucleoprotein G [Columba livia]
Length = 385
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++IG L+ + NE+ L + + GR+V++ + +D+ET+K +GFAFV +ES A +
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAQDAAR 67
Query: 91 LFSG 94
+G
Sbjct: 68 DMNG 71
>gi|383860217|ref|XP_003705587.1| PREDICTED: cleavage stimulation factor subunit 2-like [Megachile
rotundata]
Length = 441
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G V+ + D+ET KPKG+ F EY+ +E A++
Sbjct: 18 SVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 77
Query: 92 FSGIVTLYNRTLRF 105
+G + RTLR
Sbjct: 78 LNGY-EIGGRTLRV 90
>gi|425466928|ref|ZP_18846222.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9809]
gi|389830427|emb|CCI27639.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9809]
Length = 97
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++++GNL ++++ L D+ + G+V ++IP DKET + +GFAFVE ES+ AI+
Sbjct: 1 MSIFVGNLSYEISQEDLVDVFKEYGKVQRVHIPVDKETGRKRGFAFVEMESKAQETTAIE 60
Query: 91 LFSG 94
G
Sbjct: 61 ALDG 64
>gi|391341478|ref|XP_003745057.1| PREDICTED: uncharacterized protein LOC100899567 [Metaseiulus
occidentalis]
Length = 357
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDK---ETDKPKGFAFVEYESEEIGHYAI 89
V+IGN++++V E L I + G+VVD +K + P+GFAF+ YE+EE AI
Sbjct: 28 VWIGNIEKRVTECTLLKIFSKHGKVVDFDFLINKTGPQKGLPRGFAFITYENEEQAETAI 87
Query: 90 KLFSGIVTLYNRTLRFALSGQ-DKNAQNSSMTTTPLSS 126
+ +G+ L R L + + + + Q + TP+++
Sbjct: 88 RSLNGL-QLQGRRLSVSFAQEMPQPEQKAKKEVTPVAA 124
>gi|440474936|gb|ELQ43651.1| heterogeneous nuclear ribonucleoprotein A/B [Magnaporthe oryzae
Y34]
gi|440479945|gb|ELQ60674.1| heterogeneous nuclear ribonucleoprotein A/B [Magnaporthe oryzae
P131]
Length = 632
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 19 KRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVE 78
KR I +++G + ++ ++ D Q GRVVD + DK+T +P+GF FV
Sbjct: 255 KRAIPRDEQEKTSKIFVGGVSQETTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVT 314
Query: 79 YESE 82
+ESE
Sbjct: 315 FESE 318
>gi|324522371|gb|ADY48048.1| Peptidyl-prolyl cis-trans isomerase E, partial [Ascaris suum]
Length = 314
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G E+V+E++L+ + G +V + IP D ET K +GF FVE+E E AI
Sbjct: 15 LYVGGFGEEVDEKILHAGFLPFGDIVGISIPMDYETGKHRGFGFVEFELAEDAAAAIDNM 74
Query: 93 SGIVTLYNRTLR 104
+ ++ RT+R
Sbjct: 75 ND-SEMFGRTIR 85
>gi|345496803|ref|XP_003427819.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Nasonia vitripennis]
Length = 425
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G V+ + D+ET KPKG+ F EY+ +E A++
Sbjct: 18 SVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 77
Query: 92 FSGIVTLYNRTLRF 105
+G + RTLR
Sbjct: 78 LNG-YEIGGRTLRV 90
>gi|256082240|ref|XP_002577367.1| nucleotide binding protein 2 (nbp 2) [Schistosoma mansoni]
Length = 450
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 13/104 (12%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+GN++ ++ +LY++ +QAG + + + K+T FAFV +E EE YA LF
Sbjct: 7 IYVGNINPRITADILYELFLQAGPLEGVTV---KDT-----FAFVTFEDEESVPYACSLF 58
Query: 93 SGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSR---KSRSDP 133
GI TLY LR Q+ Q+ + + P S+ + R DP
Sbjct: 59 EGI-TLYGTELRIR-PRQNSKFQDLKIRSVPPSAYQFFRPRVDP 100
>gi|452825487|gb|EME32483.1| RNA-binding protein [Galdieria sulphuraria]
Length = 523
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 22 IMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYES 81
+ G+ + +V++G+L +NE +L D + G+V + + RDK T + G+AFV +
Sbjct: 168 VTPGSLHEKFSVFVGDLGGDINEDILLDAFSRFGKVTAVDLKRDKYTGEILGYAFVYFVQ 227
Query: 82 EEIGHYAIKLFSGIVTLYNRTLR 104
EE A+KL +G+ +L NR +R
Sbjct: 228 EEEAQKAMKLGNGM-SLMNRRIR 249
>gi|83699420|ref|NP_033059.2| RNA binding motif protein, X-linked-like-1 [Mus musculus]
gi|355390287|ref|NP_001239018.1| RNA binding motif protein, X-linked-like-1 [Mus musculus]
gi|81916088|sp|Q91VM5.1|RMXL1_MOUSE RecName: Full=RNA binding motif protein, X-linked-like-1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
G-like 1; AltName: Full=RNA binding motif protein, X
chromosome retrogene; Contains: RecName: Full=RNA
binding motif protein, X-linked-like-1, N-terminally
processed
gi|15030328|gb|AAH11441.1| Rbmxrt protein [Mus musculus]
gi|26334797|dbj|BAC31099.1| unnamed protein product [Mus musculus]
gi|58476937|gb|AAH89350.1| RNA binding motif protein, X chromosome retrogene [Mus musculus]
Length = 388
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++IG L+ + NE+ L + + GR+V++ + +D+ET+K +GFAFV +ES A +
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 91 LFSG 94
+G
Sbjct: 68 DMNG 71
>gi|326481712|gb|EGE05722.1| splicing factor 3b subunit 4 [Trichophyton equinum CBS 127.97]
Length = 347
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 LIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLRFALSGQ 110
++QAGR+V++++P+D+ T +G+ FVE+ SEE YA ++ + V LY + +R +
Sbjct: 1 MLQAGRIVNVHLPKDRVTQTHQGYGFVEFNSEEDAEYASRIMN-QVRLYGKPIRVNKASA 59
Query: 111 DKN 113
DK
Sbjct: 60 DKQ 62
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIGHYA 88
G +++GNLD V E+VLYD + G ++ L + RD +++ KG+ F+ + + E A
Sbjct: 68 GAELFVGNLDPMVTEQVLYDTFSRFGSLISLPKVARD-DSNLSKGYGFISFSNFEASDDA 126
Query: 89 IKLFSG 94
I +G
Sbjct: 127 IANMNG 132
>gi|148678911|gb|EDL10858.1| mCG7984 [Mus musculus]
Length = 388
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++IG L+ + NE+ L + + GR+V++ + +D+ET+K +GFAFV +ES A +
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 91 LFSG 94
+G
Sbjct: 68 DMNG 71
>gi|427780483|gb|JAA55693.1| Putative splicing factor 3b subunit 4 [Rhipicephalus pulchellus]
Length = 248
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY-ESEEIGHYAIKL 91
++ GNLD KV E +L ++ +QAG V D+ IP+D + K FAFV + SE +G Y + L
Sbjct: 10 LWCGNLDPKVTEELLRELFVQAGPVEDVKIPKDNNG-RSKNFAFVTFVHSESVG-YTLAL 67
Query: 92 FSGIVTLY 99
G V+LY
Sbjct: 68 MDG-VSLY 74
>gi|354477196|ref|XP_003500808.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Cricetulus griseus]
gi|344244124|gb|EGW00228.1| Heterogeneous nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 388
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++IG L+ + NE+ L + + GR+V++ + +D+ET+K +GFAFV +ES A +
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 91 LFSG 94
+G
Sbjct: 68 DMNG 71
>gi|66827787|ref|XP_647248.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74997530|sp|Q55GD6.1|SF3B4_DICDI RecName: Full=Splicing factor 3B subunit 4
gi|60475375|gb|EAL73310.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 359
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N + I +LD V E +L ++ IQA VV ++IP+DK T + G A+VE++S Y
Sbjct: 10 NHEACLLIRDLDPMVTESLLMELFIQAAPVVKVFIPKDKLTQQHSGRAYVEFQSSSDAEY 69
Query: 88 AIKL 91
A+K+
Sbjct: 70 ALKV 73
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPR--DKETDKPKGFAFVEYESEEIGHY 87
G N++IGNLD V+ER+L+D + G ++ + P+ E KGFAF+ ++S E
Sbjct: 97 GANLFIGNLDADVDERILHDTFSRFGTII--FTPKVMRDENGVSKGFAFINFDSFEASDA 154
Query: 88 AIK 90
AI+
Sbjct: 155 AIE 157
>gi|19114289|ref|NP_593377.1| mRNA export shuttling protein [Schizosaccharomyces pombe 972h-]
gi|3123239|sp|P31209.2|PABP_SCHPO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|2104439|emb|CAB08762.1| mRNA export shuttling protein [Schizosaccharomyces pombe]
Length = 653
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 6 KHSFVPNDVVSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRD 65
K +V + V R ++ + + NVYI NLD ++ E+ D+ Q G + L + +D
Sbjct: 236 KKVYVGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKD 295
Query: 66 KETDKPKGFAFVEYESEEIGHYAI 89
+ DKP+GF FV Y + E A+
Sbjct: 296 -QNDKPRGFGFVNYANHECAQKAV 318
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
NV+I NLD ++ + L+D G+++ + D E KG+ FV ++S E + AI+
Sbjct: 169 NVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVD-ELGNAKGYGFVHFDSVESANAAIEH 227
Query: 92 FSGIV 96
+G++
Sbjct: 228 VNGML 232
>gi|297304609|ref|XP_001102988.2| PREDICTED: RNA-binding motif protein, X-linked-like-3-like
[Macaca mulatta]
Length = 789
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 40/62 (64%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++G L+ K E+ L ++ GR++++++ +D+ET+K +GFAFV +ES A +
Sbjct: 10 LFVGGLNLKTEEKALKAEFVKYGRIINVFLMKDRETNKSRGFAFVTFESPADAKAAARDL 69
Query: 93 SG 94
+G
Sbjct: 70 NG 71
>gi|378756227|gb|EHY66252.1| hypothetical protein NERG_00948 [Nematocida sp. 1 ERTm2]
Length = 211
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 28 NSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHY 87
N GC V++GN+D V E + + L GRV+ + D+ T K KG+ F YES +
Sbjct: 3 NRGCTVFVGNIDFTVPEETIVEELSSVGRVISFRMVTDRATGKSKGYGFCTYESPIVADI 62
Query: 88 AIKLFSGIVTLYNRTLRF 105
A+ + L NR ++
Sbjct: 63 AVNRLK--IMLNNRPVKI 78
>gi|428175470|gb|EKX44360.1| hypothetical protein GUITHDRAFT_50524, partial [Guillardia theta
CCMP2712]
Length = 81
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYE 80
+Y+G LDE+VN L I G +VD+ IP D ET K +GF FVEYE
Sbjct: 4 LYVGGLDEEVNVDTLRAAFIPFGELVDVNIPLDNETGKHRGFGFVEYE 51
>gi|297711157|ref|XP_002832216.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Pongo abelii]
Length = 438
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++IG L+ + NE+ L + + GR+V++ + +D+ET+K +GFAFV +ES A +
Sbjct: 55 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 114
Query: 91 LFSG 94
+G
Sbjct: 115 DMNG 118
>gi|417412278|gb|JAA52529.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15, partial [Desmodus rotundus]
Length = 678
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 51 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 110
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQ 115
+G R LR + +KN +
Sbjct: 111 LNG-REFSGRALRVDNAASEKNKE 133
>gi|328767903|gb|EGF77951.1| hypothetical protein BATDEDRAFT_27077 [Batrachochytrium
dendrobatidis JAM81]
Length = 106
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 15/87 (17%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G V++GNL + L D Q G VVD + +D+ET + +GF FV + S E A+
Sbjct: 10 GTKVFVGNLSWGTDNNSLADAFSQFGEVVDSIVLKDRETGRSRGFGFVTFSSPESASAAV 69
Query: 90 KLFSGIVTLYNRTLRFALSGQDKNAQN 116
A++GQD N +N
Sbjct: 70 D---------------AMNGQDLNGRN 81
>gi|156553552|ref|XP_001601896.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Nasonia vitripennis]
Length = 434
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G V+ + D+ET KPKG+ F EY+ +E A++
Sbjct: 18 SVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 77
Query: 92 FSGIVTLYNRTLRF 105
+G + RTLR
Sbjct: 78 LNG-YEIGGRTLRV 90
>gi|434391462|ref|YP_007126409.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
gi|428263303|gb|AFZ29249.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
Length = 101
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++Y+GNL +V + L I + G V + +P D+ET P+GF FVE ESE AI+
Sbjct: 1 MSIYVGNLSFEVTQDDLSSIFAEYGTVKRVQLPTDRETGLPRGFGFVEMESEAAESTAIE 60
Query: 91 LFSGIVTLYNRTLR 104
G + RT++
Sbjct: 61 ALDGAEWM-GRTMK 73
>gi|42768808|gb|AAS45604.1| sex-lethal [Rhynchosciara americana]
Length = 293
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 12 NDVVSRNKRQIMS-----GNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDK 66
N V RNKR +S G N+Y+ NL + E L +I + G +V I RDK
Sbjct: 141 NGVTVRNKRIKVSFARPAGEELKETNLYVTNLPRTITEEQLDEIFGKYGLIVQKNILRDK 200
Query: 67 ETDKPKGFAFVEYESEEIGHYAIKLFSGIV 96
T KP+G AF+ Y E AI + ++
Sbjct: 201 MTGKPRGVAFIRYNKREEAQEAIAALNNVI 230
Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
++G + SG N+ + L + + +R Y + G + I RD +T G+ FV Y ++
Sbjct: 71 LTGCNGSGTNLIVNYLPQDMTDREFYSLFSTMGPIESSRIMRDFKTCYSFGYGFVNYLTD 130
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFAL---SGQDKNAQNSSMTTTPLSSRKSRSDPV 134
E AIK +G VT+ N+ ++ + +G++ N +T P + + + D +
Sbjct: 131 EGAQRAIKSLNG-VTVRNKRIKVSFARPAGEELKETNLYVTNLPRTITEEQLDEI 184
>gi|341886179|gb|EGT42114.1| CBN-CYN-13 protein [Caenorhabditis brenneri]
Length = 334
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+Y+G E+V E+VL I G VV + IP D ET K +GF FVE++ E AI
Sbjct: 13 LYVGGFTEEVTEKVLMAAFIPFGDVVAISIPMDYETGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 93 SGIVTLYNRTLR 104
+ L+ +T+R
Sbjct: 73 N-ESELFGKTIR 83
>gi|336088638|ref|NP_001229511.1| cleavage stimulation factor subunit 2 tau variant [Bos taurus]
gi|296472872|tpg|DAA14987.1| TPA: CSTF2 protein-like [Bos taurus]
Length = 642
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQ 115
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|403256025|ref|XP_003920702.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Saimiri
boliviensis boliviensis]
Length = 391
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 40/62 (64%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++IG L+ + NE+ L + + GR+V++ + +D+ET+K +GFAFV +ES A +
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 93 SG 94
+G
Sbjct: 70 NG 71
>gi|172035063|ref|YP_001801564.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354551929|ref|ZP_08971237.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171696517|gb|ACB49498.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353555251|gb|EHC24639.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 81
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
++Y+GNL +V + L + G V ++IP D+ET +P+GFAFVE ++EE AI
Sbjct: 2 SIYVGNLAYEVTDADLNTVFSDYGSVKRIHIPTDRETGRPRGFAFVEMDTEEEESKAIDT 61
Query: 92 FSG 94
G
Sbjct: 62 LDG 64
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 11 PNDVVSRNKRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDK 70
PN+ + R S ++IG+L V E +Y+ Q G V + +P D++T
Sbjct: 276 PNEAAEKRARVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGA 335
Query: 71 PKGFAFVEYESEEIGHYAIKLFSGIVTLYNRTLR--FALSGQD 111
PKGF +V++ S + A+K +G + R +R FA QD
Sbjct: 336 PKGFGYVQFSSVDDATAALKAMNG-AEIAGRAIRVDFAPPKQD 377
>gi|71043834|ref|NP_001020834.1| RNA-binding motif protein, X chromosome [Rattus norvegicus]
gi|81907907|sp|Q4V898.1|RBMX_RAT RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; AltName: Full=RNA-binding motif protein,
X chromosome retrogene; AltName: Full=RNA-binding motif
protein, X chromosome retrogene-like; Contains:
RecName: Full=RNA-binding motif protein, X chromosome,
N-terminally processed
gi|66910650|gb|AAH97479.1| RNA binding motif protein, X-linked [Rattus norvegicus]
gi|149015799|gb|EDL75123.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_b [Rattus norvegicus]
Length = 390
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++IG L+ + NE+ L + + GR+V++ + +D+ET+K +GFAFV +ES A +
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 91 LFSG 94
+G
Sbjct: 68 DMNG 71
>gi|389623913|ref|XP_003709610.1| hypothetical protein MGG_06881 [Magnaporthe oryzae 70-15]
gi|351649139|gb|EHA56998.1| hypothetical protein MGG_06881 [Magnaporthe oryzae 70-15]
Length = 568
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 19 KRQIMSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVE 78
KR I +++G + ++ ++ D Q GRVVD + DK+T +P+GF FV
Sbjct: 191 KRAIPRDEQEKTSKIFVGGVSQETTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVT 250
Query: 79 YESE 82
+ESE
Sbjct: 251 FESE 254
>gi|291401898|ref|XP_002717345.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
gi|291408303|ref|XP_002720376.1| PREDICTED: RNA binding motif protein, X-linked [Oryctolagus
cuniculus]
Length = 391
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++IG L+ + NE+ L + + GR+V++ + +D+ET+K +GFAFV +ES A +
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 91 LFSG 94
+G
Sbjct: 68 DMNG 71
>gi|431891348|gb|ELK02224.1| Heterogeneous nuclear ribonucleoprotein G [Pteropus alecto]
Length = 278
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
++IG L+ + NE+ L + + GR+V++ + +D+ET+K +GFAFV +ES A +
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 92 FSG 94
+G
Sbjct: 69 MNG 71
>gi|425444904|ref|ZP_18824945.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9443]
gi|389735245|emb|CCI01218.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9443]
Length = 97
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 41/64 (64%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++++GNL ++++ L D+ + G+V ++IP DK+T + +GFAFVE ES+ AI+
Sbjct: 1 MSIFVGNLSYEISQEDLVDVFAEYGKVKRVHIPLDKDTQRKRGFAFVEMESKAQEAAAIE 60
Query: 91 LFSG 94
G
Sbjct: 61 ALDG 64
>gi|344247055|gb|EGW03159.1| Heterogeneous nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 384
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 40/62 (64%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++IG L+ + NE+ L + + GR+V++ + +D+ET+K +GFAFV +ES A +
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 93 SG 94
+G
Sbjct: 70 NG 71
>gi|297839015|ref|XP_002887389.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333230|gb|EFH63648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 460
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 23 MSGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 82
M+ +S C V++GN+ E L +I + G VV + D+ET KPKG+ F EY+ E
Sbjct: 1 MASSSQRRC-VFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDE 59
Query: 83 EIGHYAIKLFSGIVTLYNRTLRFALSGQDK 112
E A + + R LR + DK
Sbjct: 60 ETALSARRNLQSY-EINGRQLRVDFAENDK 88
>gi|291400889|ref|XP_002716811.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
Length = 391
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++IG L+ + NE+ L + + GR+V++ + +D+ET+K +GFAFV +ES A +
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 91 LFSG 94
+G
Sbjct: 68 DMNG 71
>gi|426252729|ref|XP_004020055.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 4 [Ovis aries]
Length = 646
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 92 FSGIVTLYNRTLRFALSGQDKNAQ 115
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|355757746|gb|EHH61271.1| hypothetical protein EGM_19240 [Macaca fascicularis]
Length = 391
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++IG L+ + NE+ L + + GR+V++ + +D+ET+K +GFAFV +ES A +
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 91 LFSG 94
+G
Sbjct: 68 DMNG 71
>gi|426257491|ref|XP_004022360.1| PREDICTED: RNA-binding motif protein, X chromosome [Ovis aries]
Length = 391
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 40/62 (64%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++IG L+ + NE+ L + + GR+V++ + +D+ET+K +GFAFV +ES A +
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 93 SG 94
+G
Sbjct: 70 NG 71
>gi|326494800|dbj|BAJ94519.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
V++GN+ E L I + G VV + DKET KPKG+ F EY+ EE A +
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVVDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 93 SGIVTLYNRTLR--FALSGQ--DKN 113
G + R LR FA +G+ DKN
Sbjct: 73 QGY-EVNGRQLRVDFAENGRNTDKN 96
>gi|315635463|ref|ZP_07890729.1| RNA-binding protein [Arcobacter butzleri JV22]
gi|315480221|gb|EFU70888.1| RNA-binding protein [Arcobacter butzleri JV22]
Length = 98
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
N+Y+GNL ++N++ L + + G V + DKET + KGFAFVE + G AI+
Sbjct: 12 NIYVGNLSYRMNDKELETVFAKFGEVKSAKVIMDKETGRSKGFAFVEMADAKAGKDAIEA 71
Query: 92 FSGIVTLYNRTLR 104
+G RTLR
Sbjct: 72 LNG-NDCEGRTLR 83
>gi|293346666|ref|XP_002726404.1| PREDICTED: RNA binding motif protein, X-linked-like 1 [Rattus
norvegicus]
Length = 441
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYES 81
++IG L+ + NE+ L + + GR+V++ + +D+ET+K +GFAFV +ES
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFES 58
>gi|452821788|gb|EME28814.1| hypothetical protein Gasu_37050 [Galdieria sulphuraria]
Length = 124
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
++Y+G LD +V E +L+ + G ++D+ +P D ET + +GFAF+E+E E
Sbjct: 5 SLYVGGLDPQVTEEILWAAFVPFGDLLDVTMPLDNETQQHRGFAFIEFELPE 56
>gi|390599914|gb|EIN09310.1| translation initiation factor eIF3g [Punctularia strigosozonata
HHB-11173 SS5]
Length = 296
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 24 SGNSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 83
SGN + + + N+ E E L D+ + GRV +++ RD+ET KGFAFV +E +
Sbjct: 207 SGNRDDLPTLRVTNISEDTQENDLRDLFGRFGRVARVFVGRDRETGAGKGFAFVSFEEKA 266
Query: 84 IGHYAIKLFSGI 95
+ A++ +G
Sbjct: 267 VAERAMQKMNGF 278
>gi|354475287|ref|XP_003499861.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Cricetulus griseus]
Length = 289
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++IG L+ + NE+ L + + GR+V++ + +D+ET+K +GFAFV +ES A +
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 91 LFSG 94
+G
Sbjct: 68 DMNG 71
>gi|209878013|ref|XP_002140448.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556054|gb|EEA06099.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 546
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 17/179 (9%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
+++G L + + E + D+ G++ +++I R+ T +G AFV+Y +E G YAI
Sbjct: 212 LFVGALPKNITEEEISDVFSPYGQINEIFIMREIHTGFCRGCAFVKYAFKEQGLYAIASL 271
Query: 93 SGIVTL--YNRTLRFALSGQDKNAQNSSMTTTPLSSRKSRSDPVPMPVNGMEISHHSMRI 150
G TL NR L + + NA N +T S + + P ++H
Sbjct: 272 HGAATLGDVNRPLEVRFASRSSNANNLFLTHGLHHSAMAHNPPSGS-------AYHIFNN 324
Query: 151 SVPRH------YSSEEPPPPGVTLETNGYETHLNVTNYDYSRRVFGATLDSISRSRSGH 203
P H Y S P G L G N+T +D++ AT + RSR GH
Sbjct: 325 RKPCHIVNDASYLSANPTVVGNILSHRG-SCSRNITLFDHNGISVAATTNMYPRSR-GH 381
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 30 GCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAI 89
G N++I N+ + ++ L + G ++ ++ DK + + KG AFV Y+ A+
Sbjct: 452 GANIFIFNVPYEWEKKSLIHHFCRFGHILSAHLMIDKNSGRNKGVAFVSYDHVHSAADAV 511
Query: 90 KLFSGIVTLYNRTLRFAL-SGQDKNAQ 115
+G VT R L+ ++ GQ++ Q
Sbjct: 512 NNMNGFVTESGRKLKVSIKQGQEQFVQ 538
>gi|90085597|dbj|BAE91539.1| unnamed protein product [Macaca fascicularis]
Length = 295
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
+V++GN+ + E L DI + G VV + D+ET KPKG+ F EY+ +E A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
>gi|343959058|dbj|BAK63384.1| heterogeneous nuclear ribonucleoprotein G [Pan troglodytes]
Length = 391
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++IG L+ + NE+ L + + GR+V++ + +D+ET+K +GFAFV +ES A +
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 91 LFSG 94
+G
Sbjct: 68 DMNG 71
>gi|351715732|gb|EHB18651.1| Heterogeneous nuclear ribonucleoprotein G [Heterocephalus glaber]
Length = 356
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 32 NVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKL 91
++IG L+ + NE+ L + + GR+V++ + +D+ET+K +GFAFV +ES A +
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 92 FSG 94
+G
Sbjct: 69 MNG 71
>gi|332226186|ref|XP_003262269.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 [Nomascus
leucogenys]
Length = 1033
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++IG L K +E+ L + GR++++++ +D+ET+K +GFAF+ +ES + A +
Sbjct: 10 LFIGGLSLKTDEKALKAEFGKYGRIIEVFLMKDRETNKSRGFAFIIFESPADANAAARDM 69
Query: 93 SGIVTLYNRTLRFALSGQDKNAQNSSMTTTPLSSRKSR 130
+G L + ++ AL+ + + + TP S +SR
Sbjct: 70 NGKY-LDGKAIKVALAIKPAFKSSRWVPPTPGSGGRSR 106
>gi|301769089|ref|XP_002919961.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Ailuropoda melanoleuca]
gi|281352732|gb|EFB28316.1| hypothetical protein PANDA_008640 [Ailuropoda melanoleuca]
Length = 391
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++IG L+ + NE+ L + + GR+V++ + +D+ET+K +GFAFV +ES A +
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 91 LFSG 94
+G
Sbjct: 68 DMNG 71
>gi|195470172|ref|XP_002087382.1| GE16604 [Drosophila yakuba]
gi|194173483|gb|EDW87094.1| GE16604 [Drosophila yakuba]
Length = 240
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 33 VYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIKLF 92
++ GNLDE+V E +LY++ +QAG + + IP D + + F FV Y+ +A+ L+
Sbjct: 72 LFCGNLDERVTEEILYEVFLQAGPIEGVRIPTDN-NGRQRNFGFVTYQRLCAVPFALDLY 130
Query: 93 SGI 95
G+
Sbjct: 131 QGL 133
>gi|410308290|gb|JAA32745.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308292|gb|JAA32746.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308294|gb|JAA32747.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308296|gb|JAA32748.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308298|gb|JAA32749.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308300|gb|JAA32750.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308302|gb|JAA32751.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308304|gb|JAA32752.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++IG L+ + NE+ L + + GR+V++ + +D+ET+K +GFAFV +ES A +
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 91 LFSG 94
+G
Sbjct: 68 DMNG 71
>gi|410227798|gb|JAA11118.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227802|gb|JAA11120.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227804|gb|JAA11121.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227806|gb|JAA11122.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227808|gb|JAA11123.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227810|gb|JAA11124.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227812|gb|JAA11125.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++IG L+ + NE+ L + + GR+V++ + +D+ET+K +GFAFV +ES A +
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 91 LFSG 94
+G
Sbjct: 68 DMNG 71
>gi|355715855|gb|AES05424.1| RNA binding motif protein, X-linked [Mustela putorius furo]
Length = 392
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 31 CNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIGHYAIK 90
++IG L+ + NE+ L + + GR+V++ + +D+ET+K +GFAFV +ES A +
Sbjct: 9 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 68
Query: 91 LFSG 94
+G
Sbjct: 69 DMNG 72
>gi|359481379|ref|XP_003632613.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 2 [Vitis
vinifera]
Length = 254
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 26 NSNSGCNVYIGNLDEKVNERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIG 85
N NS +Y+GNL V++ L + + G+V + + D+ET + +GF FV Y S E
Sbjct: 165 NLNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEV 224
Query: 86 HYAIKLFSGIVTLYNRTLRFALS 108
+ AI+ G V L R++R ++
Sbjct: 225 NRAIESLDG-VDLNGRSIRVTMA 246
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.131 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,470,609,330
Number of Sequences: 23463169
Number of extensions: 147484740
Number of successful extensions: 329327
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9055
Number of HSP's successfully gapped in prelim test: 3261
Number of HSP's that attempted gapping in prelim test: 311807
Number of HSP's gapped (non-prelim): 19252
length of query: 211
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 75
effective length of database: 9,168,204,383
effective search space: 687615328725
effective search space used: 687615328725
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 73 (32.7 bits)