Your job contains 1 sequence.
>038097
LDAGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVT
VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL
QFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPA
QFLMPPIPGATAVPGIQMPGFPGQPLPMSMLRTPLGLMHKTNPVAGVSRAAASMEVKDSA
PLTNPGDSNQNVEINKRNVEHHKIRPSA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038097
(268 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 415 7.8e-39 1
TAIR|locus:2041369 - symbol:PIL1 "phytochrome interacting... 306 2.8e-27 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 305 1.2e-26 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 271 2.6e-23 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 271 4.7e-23 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 266 5.5e-23 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 249 7.2e-21 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 247 3.1e-20 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 237 5.7e-20 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 238 6.7e-20 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 239 1.3e-19 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 229 4.0e-19 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 230 9.5e-19 1
TAIR|locus:2098008 - symbol:PIL2 "phytochrome interacting... 225 1.8e-18 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 222 2.2e-18 1
UNIPROTKB|Q94LR3 - symbol:OSJNBa0010C11.7 "Helix-loop-hel... 216 9.5e-18 1
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 213 9.3e-17 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 203 2.3e-16 1
UNIPROTKB|Q2QMM0 - symbol:LOC_Os12g40710 "Helix-loop-heli... 202 2.9e-16 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 202 2.9e-16 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 200 1.3e-15 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 178 1.3e-11 1
UNIPROTKB|Q2QML8 - symbol:LOC_Os12g40730 "Helix-loop-heli... 174 3.9e-11 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 172 5.2e-11 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 169 8.3e-11 1
TAIR|locus:2201906 - symbol:AT1G10120 "AT1G10120" species... 170 1.1e-10 1
TAIR|locus:2204898 - symbol:HFR1 "AT1G02340" species:3702... 166 1.6e-10 1
TAIR|locus:2199221 - symbol:RSL4 "AT1G27740" species:3702... 163 2.1e-10 1
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 165 2.2e-10 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 164 3.1e-10 1
UNIPROTKB|Q2QQ32 - symbol:LOC_Os12g32400 "Helix-loop-heli... 147 4.0e-10 1
TAIR|locus:2115200 - symbol:BEE2 "AT4G36540" species:3702... 163 4.6e-10 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 167 5.4e-10 1
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 162 5.9e-10 1
UNIPROTKB|Q5N802 - symbol:P0004D12.24 "BHLH transcription... 166 6.1e-10 1
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 161 8.6e-10 1
UNIPROTKB|Q8W5G3 - symbol:OSJNBa0002J24.23 "Helix-loop-he... 160 1.2e-09 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 153 1.2e-09 1
UNIPROTKB|Q6K8Y4 - symbol:OJ1695_H09.18 "Basic helix-loop... 159 1.7e-09 2
UNIPROTKB|Q6Z2G7 - symbol:P0680A05.9 "Putative bHLH trans... 160 1.8e-09 1
UNIPROTKB|Q2R0R9 - symbol:LOC_Os11g41640 "Helix-loop-heli... 154 2.3e-09 1
TAIR|locus:2205420 - symbol:AT1G68920 species:3702 "Arabi... 160 3.4e-09 1
TAIR|locus:505006688 - symbol:AT5G50915 "AT5G50915" speci... 155 3.6e-09 1
TAIR|locus:2118934 - symbol:RSL2 "AT4G33880" species:3702... 157 3.9e-09 1
TAIR|locus:2014144 - symbol:BEE1 "BR enhanced expression ... 151 7.6e-09 1
UNIPROTKB|Q75M33 - symbol:P0668H12.5 "BHLH transcription ... 154 8.1e-09 1
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 151 8.3e-09 1
UNIPROTKB|Q69JJ6 - symbol:OSJNBa0026C08.22 "TA1 protein-l... 154 1.4e-08 1
UNIPROTKB|Q2QMV9 - symbol:LOC_Os12g39850 "Helix-loop-heli... 151 1.4e-08 1
TAIR|locus:2199307 - symbol:AT1G68240 species:3702 "Arabi... 135 1.9e-08 1
TAIR|locus:2028804 - symbol:CIB5 "AT1G26260" species:3702... 152 1.9e-08 1
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 148 2.1e-08 1
UNIPROTKB|Q84QW1 - symbol:OJ1191_A10.109 "BHLH transcript... 152 2.1e-08 1
UNIPROTKB|Q6ZCV8 - symbol:P0028A08.20 "Os08g0487700 prote... 151 2.2e-08 1
TAIR|locus:2172209 - symbol:AT5G62610 "AT5G62610" species... 148 2.5e-08 1
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 153 2.9e-08 1
UNIPROTKB|Q6EPZ6 - symbol:P0014G10.34 "BHLH transcription... 152 3.1e-08 1
TAIR|locus:2139484 - symbol:CIB1 "AT4G34530" species:3702... 148 4.1e-08 1
UNIPROTKB|Q6AV35 - symbol:OSJNBa0063J18.7 "Putative trans... 146 5.9e-08 1
TAIR|locus:2095198 - symbol:AT3G23690 "AT3G23690" species... 147 6.8e-08 1
TAIR|locus:2202867 - symbol:BPEp "AT1G59640" species:3702... 146 7.6e-08 1
TAIR|locus:2027809 - symbol:BEE3 "AT1G73830" species:3702... 143 7.7e-08 1
TAIR|locus:2079676 - symbol:AT3G07340 "AT3G07340" species... 148 7.8e-08 1
UNIPROTKB|Q8GZV6 - symbol:OJ1017C11.10 "Putative uncharac... 151 7.9e-08 1
TAIR|locus:2032990 - symbol:CES "AT1G25330" species:3702 ... 140 8.3e-08 1
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 146 9.0e-08 1
TAIR|locus:2053766 - symbol:AT2G42300 "AT2G42300" species... 144 1.1e-07 1
TAIR|locus:2152551 - symbol:AT5G48560 "AT5G48560" species... 147 1.2e-07 1
UNIPROTKB|Q2QMN2 - symbol:LOC_Os12g40590 "Helix-loop-heli... 140 1.9e-07 1
UNIPROTKB|Q8S490 - symbol:rau1 "Transcription factor RAU1... 123 2.1e-07 1
UNIPROTKB|Q5VR96 - symbol:P0038C05.31-1 "Os06g0275600 pro... 142 3.0e-07 2
UNIPROTKB|Q84LH4 - symbol:OSJNBb0011H13.2 "Putative Helix... 140 3.5e-07 1
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 135 3.8e-07 1
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 141 4.4e-07 1
TAIR|locus:2090679 - symbol:AT3G19500 species:3702 "Arabi... 136 6.0e-07 1
TAIR|locus:2156015 - symbol:RSL1 "AT5G37800" species:3702... 135 1.2e-06 1
UNIPROTKB|E9PKF0 - symbol:ARNTL "Aryl hydrocarbon recepto... 113 2.7e-06 1
UNIPROTKB|E9PPV4 - symbol:ARNTL "Aryl hydrocarbon recepto... 113 2.7e-06 1
UNIPROTKB|Q6ZFY4 - symbol:OJ1311_H06.19 "BHLH protein-lik... 131 3.1e-06 1
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 134 4.1e-06 1
TAIR|locus:2008693 - symbol:FBH1 "AT1G35460" species:3702... 128 4.8e-06 1
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 134 5.3e-06 1
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 123 5.3e-06 2
TAIR|locus:2028957 - symbol:RHD6 "AT1G66470" species:3702... 129 5.4e-06 1
TAIR|locus:2141573 - symbol:FBH2 "AT4G09180" species:3702... 127 6.5e-06 1
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 132 6.7e-06 1
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 133 8.0e-06 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 128 8.3e-06 1
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 129 1.4e-05 1
UNIPROTKB|Q651K2 - symbol:B1089G05.30 "BHLH protein-like"... 125 1.5e-05 1
UNIPROTKB|Q6ZA99 - symbol:P0431A03.9 "Os08g0432800 protei... 126 1.7e-05 1
TAIR|locus:2084339 - symbol:AIF2 "ATBS1 Interacting Facto... 121 1.9e-05 1
UNIPROTKB|Q9ASJ3 - symbol:P0439B06.24 "Putative uncharact... 124 2.0e-05 1
UNIPROTKB|Q8S0N2 - symbol:P0692C11.41-1 "BHLH transcripti... 126 2.1e-05 1
UNIPROTKB|Q69TX2 - symbol:P0021C04.13 "BHLH protein-like"... 119 2.8e-05 1
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 123 3.0e-05 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 124 3.0e-05 1
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 127 3.0e-05 1
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 127 3.1e-05 1
TAIR|locus:2152262 - symbol:BIM3 "AT5G38860" species:3702... 122 3.5e-05 1
WARNING: Descriptions of 79 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 114/282 (40%), Positives = 155/282 (54%)
Query: 2 DAGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYE-DTEGSACPCDQYEKKLERKAVT 60
+A K E V +SS+CS + ++ KR+ + E SA D + E +
Sbjct: 246 EARKAPEATVATSSVCSGNGAGSDELWR--QQKRKCQAQAECSASQDDDLDD--EPGVLR 301
Query: 61 VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
G++S ++ RT EVH ER+RRD+IN+KMRALQELIPNCNK+DKASML+EAI+YLKTL
Sbjct: 302 KSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTL 361
Query: 121 QFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPA 180
Q QV MMSMGTG+C+P M+LPT MQ H P M+HFP +G+G+ M + N
Sbjct: 362 QLQVQMMSMGTGLCIPPMLLPTA---MQ--HLQIPPMAHFPHLGMGLGYGMGVFDMSNTG 416
Query: 181 QFLMPPIPGA--------------TAVPGIQ-MP--GFPGQPLPMSMLRTPLGLMHKTNP 223
MPP+PGA +PG MP G PGQ +P S P P
Sbjct: 417 ALQMPPMPGAHFPCPMIPGASPQGLGIPGTSTMPMFGVPGQTIPSSASSVPPFASLAGLP 476
Query: 224 V--AGVSRAAASME--VKDSAPLTNPGDSNQNVE-INKRNVE 260
V +GV + + +M V+D G +NQ + +NK ++
Sbjct: 477 VRPSGVPQVSGAMANMVQDQ----QQGIANQQQQCLNKEAIQ 514
>TAIR|locus:2041369 [details] [associations]
symbol:PIL1 "phytochrome interacting factor 3-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0010017 "red or far-red light
signaling pathway" evidence=IEP;IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010017 GO:GO:0009641 HOGENOM:HOG000115543
ProtClustDB:CLSN2680935 EMBL:AB090873 EMBL:AY219127 EMBL:AY954840
IPI:IPI00545843 PIR:T02190 RefSeq:NP_182220.2 UniGene:At.36425
ProteinModelPortal:Q8L5W8 SMR:Q8L5W8 IntAct:Q8L5W8 STRING:Q8L5W8
PRIDE:Q8L5W8 EnsemblPlants:AT2G46970.1 GeneID:819311
KEGG:ath:AT2G46970 TAIR:At2g46970 eggNOG:NOG291407
InParanoid:Q8L5W8 OMA:MELVCEN PhylomeDB:Q8L5W8
Genevestigator:Q8L5W8 Uniprot:Q8L5W8
Length = 416
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 78/177 (44%), Positives = 102/177 (57%)
Query: 4 GKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRY---EDTEGSACPCDQYEKKLERKA-V 59
G+ E SSS S G S + C+ LKR+Y E+ E + + ++ + K V
Sbjct: 160 GRSTELYFASSSKFSRGTSRDLSCCS---LKRKYGDIEEEESTYLSNNSDDESDDAKTQV 216
Query: 60 TVRGSKS-NRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLK 118
R K ++KR+ EVHK YERKRRD+ NKKMRALQ+L+PNC K DKAS+L+EAI Y++
Sbjct: 217 HARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMR 276
Query: 119 TLQFQVMMMSMGTGVCMPSMMLPTGI-----IGMQQMHAVAP-QMSHFPPMGIGMDG 169
TLQ QV MMSMG G+ P MLP G +GM A P + F PM + G
Sbjct: 277 TLQLQVQMMSMGNGLIRPPTMLPMGHYSPMGLGMHMGAAATPTSIPQFLPMNVQATG 333
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 305 (112.4 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 82/206 (39%), Positives = 119/206 (57%)
Query: 8 EPPVPSSSLCSLGASNNNPACN-TFNLKRRYEDTEGSACPCDQYEKKL---ERKAVTVRG 63
E V SS+ S G S + P+ + + +LKR++ + + C + E++ ++A R
Sbjct: 277 EKAVVCSSVGS-GNSLDGPSESPSLSLKRKHSNIQDIDCHSEDVEEESGDGRKEAGPSRT 335
Query: 64 SKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQ 123
+++ R+ EVH ER+RRD+IN+KMRALQELIPNCNKVDKASML+EAI+YLK+LQ Q
Sbjct: 336 GLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQ 395
Query: 124 VMMMSMGTGVCMP-SMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPA-Q 181
V +MSM +G +P ++M P G+ G A A M P +G+ + G+ N Q
Sbjct: 396 VQIMSMASGYYLPPAVMFPPGM-GHYPAAAAAMAMGMGMPYAMGLPDLSRGGSSVNHGPQ 454
Query: 182 FL---MPPIPGATAVPGIQMPG-FPG 203
F M P A +P + G F G
Sbjct: 455 FQVSGMQQQPVAMGIPRVSGGGIFAG 480
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 271 (100.5 bits), Expect = 2.6e-23, P = 2.6e-23
Identities = 83/217 (38%), Positives = 111/217 (51%)
Query: 14 SSLCSLGASNNNPA---CNTFNLKR-RYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRK 69
SS CS G A C T + KR R T+ S D K ++ S SNR+
Sbjct: 202 SSGCSFGKDIKEMASGRCITTDRKRKRINHTDESVSLSDAIGNKSNQR------SGSNRR 255
Query: 70 KRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
R EVH ER+RRD+IN++M+ALQELIP+C+K DKAS+L+EAIDYLK+LQ Q+ +M M
Sbjct: 256 SRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVMWM 315
Query: 130 GTGVCMPSMMLPTGIIGMQQMHAV----AP-QMSHFPPMGIGMDGRMQMGAG--C-NPAQ 181
G+G+ + P G+Q + +P Q+ FP M +Q G C NP Q
Sbjct: 316 GSGMAAAAASAPMMFPGVQPQQFIRQIQSPVQLPRFPVMD---QSAIQNNPGLVCQNPVQ 372
Query: 182 FLMPPIPGATAVPGIQMPGFPGQPLPMSMLR--TPLG 216
+ A + G Q PM MLR +P G
Sbjct: 373 NQIISDRFARYIGGFPHMQAATQMQPMEMLRFSSPAG 409
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 271 (100.5 bits), Expect = 4.7e-23, P = 4.7e-23
Identities = 75/163 (46%), Positives = 96/163 (58%)
Query: 7 IEPPVPSSSLCSLGASNNNPA-CNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSK 65
IE SSS+ S S P N + KR+ E A D+ E + E +
Sbjct: 225 IEITGTSSSVVS--KSEIEPEKTNVDDRKRK----EREATTTDETESRSEETKQARVSTT 278
Query: 66 SNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVM 125
S ++ R EVH ERKRRD+IN++M+ALQELIP CNK DKASML+EAI+Y+K+LQ Q+
Sbjct: 279 STKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQ 338
Query: 126 MMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMD 168
MMSMG G+ MP MM P GMQQ P M+ MG+GM+
Sbjct: 339 MMSMGCGM-MP-MMYP----GMQQY---MPHMA----MGMGMN 368
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 266 (98.7 bits), Expect = 5.5e-23, P = 5.5e-23
Identities = 74/173 (42%), Positives = 96/173 (55%)
Query: 39 DTEGSACPC-DQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQEL 97
D S C Q E + E+KA + S S ++ R +H + ERKRRDKIN++M+ LQ+L
Sbjct: 181 DDHDSVCHSRPQMEDEEEKKAGG-KSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKL 239
Query: 98 IPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQM 157
+PN +K DKASML+E I+YLK LQ QV MMS + MPSMMLP + MQQ + QM
Sbjct: 240 VPNSSKTDKASMLDEVIEYLKQLQAQVSMMSR---MNMPSMMLP---MAMQQQQQL--QM 291
Query: 158 SHFP-PMGIGMDGRMQMGAGCNPAQFLMPPIPGATAVPGIQMPGFPGQPLPMS 209
S PMG+GM G G G + A + P I P LPM+
Sbjct: 292 SLMSNPMGLGM-GMGMPGLGLLDLNSMNR---AAASAPNIHANMMPNPFLPMN 340
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 249 (92.7 bits), Expect = 7.2e-21, P = 7.2e-21
Identities = 69/167 (41%), Positives = 93/167 (55%)
Query: 54 LERKAVTVRGSK---SNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASML 110
L A R SK + R+ R EVH ER+RRD+IN+K+RALQEL+P+CNK DKAS+L
Sbjct: 208 LSEVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASIL 267
Query: 111 EEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGR 170
+EAI+YLK+LQ QV +M M TG+ +P MM P G Q+ PPMG+G++
Sbjct: 268 DEAIEYLKSLQMQVQIMWMTTGI-VP-MMFP----GTHQL---------MPPMGMGLNTA 312
Query: 171 MQMGA---GCNPAQ----FLMPPIPGATAVPGIQMPGFPGQPLPMSM 210
GA G N Q ++ +P +P I P +P M
Sbjct: 313 CMPGAQAQGLNQMQRTTYYMNNSLPNQ--MPQIPSPAMNAPSVPDDM 357
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 247 (92.0 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 60/156 (38%), Positives = 87/156 (55%)
Query: 63 GSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQF 122
GS S ++ R ++H ER+RR++IN++M+ LQEL+P C K DK SMLE+ I+Y+K+LQ
Sbjct: 349 GSTSRKRSRAADMHNLSERRRRERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQL 408
Query: 123 QVMMMSMGTGVCMPSMM--------LPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMG 174
Q+ MMSMG G+ MP MM +P +GM+ M+ P + FP G M
Sbjct: 409 QIQMMSMGHGM-MPPMMHEGNTQQFMPHMAMGMKGMNRPPPFVP-FPGKTFPRPGHM--- 463
Query: 175 AGCNPAQ-FLMPPIPGATA--VPGIQMPGFPGQPLP 207
AG P+ L P P A + + +P P+P
Sbjct: 464 AGVGPSYPALRYPFPDTQASDLSRVHVPSLHSNPVP 499
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 48/96 (50%), Positives = 66/96 (68%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ R+ E H ER+RRD+IN+K++ALQEL+PNC K DK SML+EAIDYLK+LQ Q+ M+
Sbjct: 10 RRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 69
Query: 128 SMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPM 163
MG G+ P ++P + Q MH + S PP+
Sbjct: 70 VMGKGMA-P--VVPPEL--QQYMHYITADPSQIPPI 100
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 238 (88.8 bits), Expect = 6.7e-20, P = 6.7e-20
Identities = 74/223 (33%), Positives = 110/223 (49%)
Query: 13 SSSLC---SLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLER--KAVTVRG---- 63
S++ C S G +NNN N+ + S D+Y+ + E +AV
Sbjct: 125 SAAACFGFSGGGNNNNVQGNSSGTRVSSSSVGASGNETDEYDCESEEGGEAVVDEAPSSK 184
Query: 64 ----SKSNRKK-RTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLK 118
S+S+ K+ R EVH E++RR +IN+KM+ALQ LIPN NK DKASML+EAI+YLK
Sbjct: 185 SGPSSRSSSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLK 244
Query: 119 TLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCN 178
LQ QV M++M G+ + + LP + Q+ + P + P+ ++ Q + N
Sbjct: 245 QLQLQVQMLTMRNGINLHPLCLPGTTLHPLQLSQIRPPEATNDPL---LNHTNQFASTSN 301
Query: 179 PAQFLMPPIPGATAVPGIQMP-G-FPGQPLPMSMLRTPLGLMH 219
+ + P I+ G FP P+ M R GL H
Sbjct: 302 APEMINTVASSYALEPSIRSHFGPFPLLTSPVEMSREG-GLTH 343
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 239 (89.2 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 68/187 (36%), Positives = 102/187 (54%)
Query: 14 SSLCSLGASNNNPACNT---FNLKRRY--EDTEGSACPCDQYEKKLERKAVTVRGSK--- 65
SS CS G +N T + KR++ + + S D + + + + S+
Sbjct: 191 SSGCSYGRNNKETVSGTSVTIDRKRKHVMDADQESVSQSDIGLTSTDDQTMGNKSSQRSG 250
Query: 66 SNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVM 125
S R+ R EVH ER+RRD+IN++M+ALQELIP+C++ DKAS+L+EAIDYLK+LQ Q+
Sbjct: 251 STRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQ 310
Query: 126 MMSMGTGVCMPS------MMLPTGIIGMQQMHAVAPQ----MSHFPPMGIGMDGRMQMGA 175
+M MG+G+ + MM P G+ ++ +A Q +S FP M + G
Sbjct: 311 VMWMGSGMAAAAAAAASPMMFP-GVQSSPYINQMAMQSQMQLSQFPVMNRSAP-QNHPGL 368
Query: 176 GC-NPAQ 181
C NP Q
Sbjct: 369 VCQNPVQ 375
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 46/79 (58%), Positives = 58/79 (73%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG +++ R EVH E++RR KIN+KM+ALQ LIPN NK DKASML+EAI+YLK LQ
Sbjct: 94 RGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQ 153
Query: 122 FQVMMMSMGTGVCM-PSMM 139
QV M+SM GV + PS +
Sbjct: 154 LQVQMLSMRNGVYLNPSYL 172
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 230 (86.0 bits), Expect = 9.5e-19, P = 9.5e-19
Identities = 54/130 (41%), Positives = 76/130 (58%)
Query: 51 EKKLERKAVT-VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASM 109
E +E + R S S+++ R +HK ER+RR KIN+ M+ALQEL+P C K D++SM
Sbjct: 256 ETNVENQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSM 315
Query: 110 LEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDG 169
L++ I+Y+K+LQ Q+ M SMG V +P MM G I Q M +A M+ PP I
Sbjct: 316 LDDVIEYVKSLQSQIQMFSMGH-VMIPPMMY-AGNIQQQYMPHMAMGMNR-PPAFIPFPR 372
Query: 170 RMQMGAGCNP 179
+ M G P
Sbjct: 373 QAHMAEGVGP 382
>TAIR|locus:2098008 [details] [associations]
symbol:PIL2 "phytochrome interacting factor 3-like 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010017 "red or far-red light signaling
pathway" evidence=IEP] [GO:0010089 "xylem development"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 GO:GO:0010017
EMBL:AL138651 EMBL:AB090874 EMBL:BT033108 IPI:IPI00525935
IPI:IPI00846835 PIR:T48001 RefSeq:NP_001078329.1 RefSeq:NP_191768.2
UniGene:At.1005 UniGene:At.50304 ProteinModelPortal:Q8L5W7
SMR:Q8L5W7 IntAct:Q8L5W7 STRING:Q8L5W7 EnsemblPlants:AT3G62090.2
GeneID:825382 KEGG:ath:AT3G62090 TAIR:At3g62090 eggNOG:NOG305930
HOGENOM:HOG000115543 InParanoid:Q8L5W7 OMA:ETNMLES PhylomeDB:Q8L5W7
ProtClustDB:CLSN2680935 Genevestigator:Q8L5W7 Uniprot:Q8L5W7
Length = 363
Score = 225 (84.3 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 67/176 (38%), Positives = 90/176 (51%)
Query: 38 EDTEGSACPCDQYEKKLE--RKAVTVRGSKSN-RKKRTPEVHKRYERKRRDKINKKMRAL 94
ED+EGS + + + R V R K+ ++KR E + ER +R+ INKKMR L
Sbjct: 152 EDSEGSMYLSSSLDDESDDARPQVPARTRKALVKRKRNAEAYNSPERNQRNDINKKMRTL 211
Query: 95 QELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVA 154
Q L+PN +K D SML+EAI+Y+ LQ QV MM+MG PSMM+P G
Sbjct: 212 QNLLPNSHKDDNESMLDEAINYMTNLQLQVQMMTMGNRFVTPSMMMPLG----------- 260
Query: 155 PQMSHFPPMGIGMDGRMQMGAG-CNPAQFLMPPIPGAT-AVPGIQMPGFPGQPLPM 208
P S MG+ M MQMG PA L +PG + ++ PG +PM
Sbjct: 261 PNYSQ---MGLAMGVGMQMGEQQFLPAHVLGAGLPGINDSADMLRFLNHPGL-MPM 312
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 49/114 (42%), Positives = 68/114 (59%)
Query: 45 CPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV 104
C ++ E + T ++ R EVH E++RR +IN+KM+ALQ LIPN +K
Sbjct: 6 CESEEALGSSESEQPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKT 65
Query: 105 DKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMS 158
DKASML++AI+YLK LQ QV M+SM G+ +P P + G + H PQMS
Sbjct: 66 DKASMLDDAIEYLKQLQLQVQMLSMRNGLYLP----PVNLSGAPE-HLPIPQMS 114
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 50/110 (45%), Positives = 66/110 (60%)
Query: 77 KRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMP 136
++ KRRD+IN+KM+ LQ+L+PN +K DKASML+E IDYLK LQ QV +MS M
Sbjct: 7 RKNNHKRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQVQVMSR-----MG 61
Query: 137 SMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFLMPP 186
SMM+P G+ Q +V QM+ +G+ M Q G G P PP
Sbjct: 62 SMMMPMGMAMPQLQMSVMAQMAQMAQIGLSMMNMGQAG-GYAPMHMHTPP 110
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 213 (80.0 bits), Expect = 9.3e-17, P = 9.3e-17
Identities = 63/169 (37%), Positives = 89/169 (52%)
Query: 51 EKKLERKAVT-----VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD 105
E KL+ + T RGS S ++ RT E+H ER+RR+KIN+KM+ LQ+LIP CNK
Sbjct: 230 ESKLKAREETHGTEEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKST 289
Query: 106 KASMLEEAIDYLKTLQFQVM-MMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMG 164
K S L++AI+Y+K+LQ Q+ MMS +P + M + P FP
Sbjct: 290 KVSTLDDAIEYVKSLQSQIQGMMSPMMNAGNTQQFMPHMAMDMNR----PPPFIPFPGTS 345
Query: 165 IGMDGRMQMGAGCNPAQFLMP--PIPGA-TAVPG-IQMPGFPGQPLPMS 209
M +M AG P+ + P P P T P +++P P QP P+S
Sbjct: 346 FPMPAQM---AGVGPS-YPAPRYPFPNIQTFDPSRVRLPS-P-QPNPVS 388
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 44/103 (42%), Positives = 62/103 (60%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RGS S ++ R E+H ER+RR+KIN++M+ LQ+LIP CNK K SMLE+ I+Y+K+L+
Sbjct: 141 RGSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLE 200
Query: 122 FQV--MMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPP 162
Q+ M M G+ P +P M V P S+ PP
Sbjct: 201 MQINQFMPHMAMGMNQPPAYIP--FPSQAHMAGVGP--SYPPP 239
>UNIPROTKB|Q2QMM0 [details] [associations]
symbol:LOC_Os12g40710 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 Gramene:Q2QMM0 Uniprot:Q2QMM0
Length = 266
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 62/192 (32%), Positives = 92/192 (47%)
Query: 48 DQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNC-NKVDK 106
D E+K ++K + K++R + H E++RR KI ++ R LQ L+P C NK ++
Sbjct: 59 DSGERKKKKKKASSAAGKASRHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQ 118
Query: 107 ASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPM-GI 165
AS L++ I Y+K+LQ Q+ S G +++ P + MH AP PP+ G
Sbjct: 119 ASTLDQTIQYMKSLQHQLEATS-AVGSPAAAVLYPAAVHPQSYMHPPAPP----PPVAGA 173
Query: 166 GMDGRMQ-MGAG----CNPAQFLMPPIPGATAVP-GIQMPGFPGQPLPMSMLRTPLGLMH 219
M M AG P PP P AT +P G +P +P P P +L P ++
Sbjct: 174 AAPVTMAPMPAGMVLAAAPPGAAPPPGPPATMMPFGAMLP-YP--PYPEVLLPPPPATLY 230
Query: 220 KTNPVAGVSRAA 231
P A S AA
Sbjct: 231 GRPPAAAPSVAA 242
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 44/94 (46%), Positives = 61/94 (64%)
Query: 48 DQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKA 107
D+Y + +R R S ++ + H E+KRR KIN+KM+ALQ+LIPN NK DKA
Sbjct: 72 DKYAFEHKRSGAKQRNSL--KRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKA 129
Query: 108 SMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLP 141
SML+EAI+YLK LQ QV +++ G+ + M LP
Sbjct: 130 SMLDEAIEYLKQLQLQVQTLAVMNGLGLNPMRLP 163
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 200 (75.5 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 54/162 (33%), Positives = 81/162 (50%)
Query: 38 EDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQEL 97
+DTEG D+ E + E G + R+ R +H ER+RRD+IN++MR LQ+L
Sbjct: 144 QDTEG-----DEQETRGEA------GRSNGRRGRAAAIHNESERRRRDRINQRMRTLQKL 192
Query: 98 IPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGV----CMPSMMLPTGIIGMQ----- 148
+P +K DK S+L++ I++LK LQ QV MS+ + +P + P ++ +Q
Sbjct: 193 LPTASKADKVSILDDVIEHLKQLQAQVQFMSLRANLPQQMMIPQLPPPQSVLSIQHQQQQ 252
Query: 149 --QMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFLMPPIP 188
Q Q F + RM MG G N L+PP P
Sbjct: 253 QQQQQQQQQQQQQFQMSLLATMARMGMGGGGNGYGGLVPPPP 294
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 178 (67.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 42/99 (42%), Positives = 61/99 (61%)
Query: 50 YEKKLERKAVTVRGSKSNRKKRT-------PEVHKRYERKRRDKINKKMRALQELIPNCN 102
+ +E +A + G+ +N K RT + H ER RR+KI+++M+ LQ L+PN N
Sbjct: 217 HSSDVEPQANSAPGNSANAKPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSN 276
Query: 103 KVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLP 141
K DKASML+E IDY+K LQ QV ++SM + P +LP
Sbjct: 277 KADKASMLDEIIDYVKFLQLQVKVLSMSR-LGAPGAVLP 314
>UNIPROTKB|Q2QML8 [details] [associations]
symbol:LOC_Os12g40730 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 KEGG:dosa:Os12t0599400-00
KEGG:dosa:Os12t0599550-00 Gramene:Q2QML8 HOGENOM:HOG000244163
Uniprot:Q2QML8
Length = 387
Score = 174 (66.3 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 59/183 (32%), Positives = 88/183 (48%)
Query: 57 KAVTVRGSKSNRKKRTP-----EVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLE 111
K + RG +S++ R E+ ++ R RR KI ++ R LQ L+P C+K ++AS L+
Sbjct: 196 KQASPRGCRSSQPYRKSGDSIDELFTKFHR-RRFKITERFRTLQRLVPGCDKSNQASTLD 254
Query: 112 EAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRM 171
+ I Y+K+LQ Q+ MS+ G P+++ P + MH P PP+ + M M
Sbjct: 255 QTIQYMKSLQHQLKAMSV-VG-SPPALLYPAAVHPQSYMHPPPPP----PPVTMPMHPGM 308
Query: 172 QMGAGCNPAQFLMPPIPGATA-VP-GIQMPGFPGQPLPMSMLRTPLGLMHKTNPVAGVSR 229
+ A P PP PG A VP G +P +P P P +L P P A
Sbjct: 309 VLAA---PPPGAAPP-PGPPAMVPFGAMLP-YP--PYPAVLLPPPAAATLYGRPPAPAPG 361
Query: 230 AAA 232
AA
Sbjct: 362 VAA 364
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 172 (65.6 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 34/62 (54%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 141 RRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 200
Query: 128 SM 129
SM
Sbjct: 201 SM 202
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 169 (64.5 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M++LQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 133 RRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 192
Query: 128 SM 129
SM
Sbjct: 193 SM 194
>TAIR|locus:2201906 [details] [associations]
symbol:AT1G10120 "AT1G10120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004122 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT012655 EMBL:AK221806 EMBL:AK229309
EMBL:AK230347 EMBL:AF488606 IPI:IPI00541831 PIR:T00632
RefSeq:NP_172483.4 UniGene:At.43391 UniGene:At.69296
ProteinModelPortal:Q6NKN9 SMR:Q6NKN9 EnsemblPlants:AT1G10120.1
GeneID:837549 KEGG:ath:AT1G10120 TAIR:At1g10120 eggNOG:NOG271189
HOGENOM:HOG000090626 InParanoid:Q6NKN9 OMA:GESSHED PhylomeDB:Q6NKN9
ProtClustDB:CLSN2681496 Genevestigator:Q6NKN9 Uniprot:Q6NKN9
Length = 366
Score = 170 (64.9 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 48/155 (30%), Positives = 78/155 (50%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++MR LQEL+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 209 RRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 268
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGI----GMDGRM-QMGAGCNPAQ 181
+SM P + + I + + + + + P +G+ G G + + A NP
Sbjct: 269 LSMKLATVNPEINIDIDRILAKDL--LQSRDRNTPTLGLNPFAGFQGNIPNLSATTNPQY 326
Query: 182 FLMPPIPGATAVPGIQMPGFPGQPLPMSMLRTPLG 216
+P + + + GF P MS +P G
Sbjct: 327 NPLPQTTLESELQNLYQMGFVSNPSTMSSF-SPNG 360
>TAIR|locus:2204898 [details] [associations]
symbol:HFR1 "AT1G02340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009585 "red, far-red light
phototransduction" evidence=TAS] [GO:0009642 "response to light
intensity" evidence=IEP] [GO:0009785 "blue light signaling pathway"
evidence=TAS] [GO:0003712 "transcription cofactor activity"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009738
"abscisic acid mediated signaling pathway" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003712
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC064879
GO:GO:0009642 GO:GO:0009785 EMBL:AF288287 EMBL:AF324245
EMBL:AF323182 EMBL:AK117248 IPI:IPI00545685 PIR:G86153
RefSeq:NP_563650.1 UniGene:At.24795 ProteinModelPortal:Q9FE22
SMR:Q9FE22 IntAct:Q9FE22 STRING:Q9FE22 PRIDE:Q9FE22
EnsemblPlants:AT1G02340.1 GeneID:839300 KEGG:ath:AT1G02340
TAIR:At1g02340 eggNOG:NOG274868 HOGENOM:HOG000112891 OMA:FSSHAMR
PhylomeDB:Q9FE22 ProtClustDB:CLSN2916946 Genevestigator:Q9FE22
GermOnline:AT1G02340 Uniprot:Q9FE22
Length = 292
Score = 166 (63.5 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 44/117 (37%), Positives = 67/117 (57%)
Query: 48 DQYEKKLERKAVTVRGSKSNRKKRTPEV----HKRYERKRRD-KINKKMRALQELIPNCN 102
+++E +R+ + V S ++ T EV K +R+RRD K++ KMR LQ+L+PNC+
Sbjct: 107 NKHENPKKRR-IQVLSSDDESEEFTREVPSVTRKGSKRRRRDEKMSNKMRKLQQLVPNCH 165
Query: 103 KVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSH 159
K DK S+L++ I+Y+K LQ Q+ MMS GV P + T GM A +H
Sbjct: 166 KTDKVSVLDKTIEYMKNLQLQLQMMST-VGV-NPYFLPATLGFGMHNHMLTAMASAH 220
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 163 (62.4 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 33/75 (44%), Positives = 50/75 (66%)
Query: 55 ERKAVT-VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEA 113
E+ +VT V+G K + Y RKRR+KIN++++ LQ L+PN KVD ++MLEEA
Sbjct: 156 EKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEA 215
Query: 114 IDYLKTLQFQVMMMS 128
+ Y+K LQ Q+ ++S
Sbjct: 216 VHYVKFLQLQIKLLS 230
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 165 (63.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 31/62 (50%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++MRALQEL+PN NK D+A+ML+E +DY+K L+ QV ++
Sbjct: 136 RRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 195
Query: 128 SM 129
SM
Sbjct: 196 SM 197
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 164 (62.8 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 31/62 (50%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M++LQEL+PN NK DKASML+E I+Y++ LQ QV ++
Sbjct: 102 RRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVL 161
Query: 128 SM 129
SM
Sbjct: 162 SM 163
>UNIPROTKB|Q2QQ32 [details] [associations]
symbol:LOC_Os12g32400 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
eggNOG:NOG284967 Uniprot:Q2QQ32
Length = 198
Score = 147 (56.8 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 36/100 (36%), Positives = 56/100 (56%)
Query: 30 TFNLKRRYE-DTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKIN 88
T KR+ + DTE K++ K + K + + + + Y + RR +IN
Sbjct: 76 TIGNKRKVQMDTENELMT--NRSKEVRTKMSVSKACKHSVSAESSQSY--YAKNRRQRIN 131
Query: 89 KKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+++R LQELIPN KVD ++MLEEAI Y+K L Q+ ++S
Sbjct: 132 ERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKLLS 171
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 163 (62.4 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 35/86 (40%), Positives = 52/86 (60%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+KKM+ LQ+++P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 144 RRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEF 203
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHA 152
+SM V P + + +Q A
Sbjct: 204 LSMKLSVINPELECHIDDLSAKQFQA 229
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 167 (63.8 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 33/62 (53%), Positives = 46/62 (74%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR+KI+ +M+ LQEL+PN NK +KASML+E IDY+K LQ QV ++
Sbjct: 317 RRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQLQVKVL 376
Query: 128 SM 129
SM
Sbjct: 377 SM 378
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 162 (62.1 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 34/95 (35%), Positives = 56/95 (58%)
Query: 46 PCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD 105
P Q + + T+R R+ + + H ER RR++I +++R+LQEL+P NK D
Sbjct: 125 PMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTD 184
Query: 106 KASMLEEAIDYLKTLQFQVMMMSM----GTGVCMP 136
+A+M++E +DY+K L+ QV ++SM G G P
Sbjct: 185 RAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAP 219
>UNIPROTKB|Q5N802 [details] [associations]
symbol:P0004D12.24 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008207 eggNOG:NOG283912 EMBL:AP003433 EMBL:HQ858864
EMBL:AK101063 RefSeq:NP_001045188.1 UniGene:Os.5763
EnsemblPlants:LOC_Os01g68700.2 GeneID:4324327 KEGG:osa:4324327
ProtClustDB:CLSN2692207 Uniprot:Q5N802
Length = 481
Score = 166 (63.5 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 39/99 (39%), Positives = 59/99 (59%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 280 RRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEF 339
Query: 127 MSMGTGVCMPSM---MLPTGIIGMQQMHAVAP-QMSHFP 161
+SM P + LP ++ + +P Q SHFP
Sbjct: 340 LSMKLATVNPQLDFNNLPN-LLAKDMHQSCSPLQSSHFP 377
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 161 (61.7 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 34/95 (35%), Positives = 55/95 (57%)
Query: 46 PCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD 105
P Q + ++R R+ + + H ER RR++I +++RALQEL+P NK D
Sbjct: 127 PMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTD 186
Query: 106 KASMLEEAIDYLKTLQFQVMMMSM----GTGVCMP 136
+A+M++E +DY+K L+ QV ++SM G G P
Sbjct: 187 RAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAP 221
>UNIPROTKB|Q8W5G3 [details] [associations]
symbol:OSJNBa0002J24.23 "Helix-loop-helix DNA-binding
domain containing protein, expressed" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000140 HOGENOM:HOG000240244 EMBL:AC090713
EnsemblPlants:LOC_Os03g55550.1 eggNOG:NOG237829 OMA:WIWERRR
Uniprot:Q8W5G3
Length = 310
Score = 160 (61.4 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 36/97 (37%), Positives = 55/97 (56%)
Query: 34 KRRYEDTEGSACP-----CDQYEK-KLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKI 87
KR E + +C C Q + K++R A G R++ Y R+RR++I
Sbjct: 173 KRNQESMQSGSCSDNESNCSQVNRRKVDRVAGGGNGKVPARRRSATIAQSLYARRRRERI 232
Query: 88 NKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQV 124
N ++R LQ+L+PN KVD ++MLEEA+ Y+K LQ Q+
Sbjct: 233 NGRLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQI 269
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 153 (58.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 34/77 (44%), Positives = 51/77 (66%)
Query: 52 KKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLE 111
K L+RKA RG S+ P+ Y RKRR++IN +++ LQ L+PN KVD ++MLE
Sbjct: 126 KSLKRKAKANRGIASD-----PQ--SLYARKRRERINDRLKTLQSLVPNGTKVDISTMLE 178
Query: 112 EAIDYLKTLQFQVMMMS 128
+A+ Y+K LQ Q+ ++S
Sbjct: 179 DAVHYVKFLQLQIKLLS 195
>UNIPROTKB|Q6K8Y4 [details] [associations]
symbol:OJ1695_H09.18 "Basic helix-loop-helix (BHLH)-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000239571 EMBL:AP003975 EMBL:AP004094
EnsemblPlants:LOC_Os02g55250.1 OMA:GQDDFFD Uniprot:Q6K8Y4
Length = 463
Score = 159 (61.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 30/47 (63%), Positives = 40/47 (85%)
Query: 83 RRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++SM
Sbjct: 252 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSM 298
Score = 40 (19.1 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 16/56 (28%), Positives = 22/56 (39%)
Query: 125 MMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGA-GCNP 179
M G G+C+ + L T I + A S P G G G + G G +P
Sbjct: 367 MQYLQGKGLCLMPISLATAI-------SSATSSSLLPRTGGGAGGSLHEGGNGTSP 415
>UNIPROTKB|Q6Z2G7 [details] [associations]
symbol:P0680A05.9 "Putative bHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008208 eggNOG:NOG251551 EMBL:AP005323 EMBL:AK119183
RefSeq:NP_001047868.1 UniGene:Os.7751
EnsemblPlants:LOC_Os02g47660.1 GeneID:4330462 KEGG:osa:4330462
OMA:TVESLCQ ProtClustDB:CLSN2693116 Uniprot:Q6Z2G7
Length = 361
Score = 160 (61.4 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 53/170 (31%), Positives = 83/170 (48%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++MR LQEL+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 167 RRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEF 226
Query: 127 MSMGTGVCMP--SMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGC---NPAQ 181
+SM P + + + G +Q+ A + P M + M Q+ C +P Q
Sbjct: 227 LSMKIAASNPVVNFNIVEDLFG-RQLSQAACNPAALPAMALPM---AQVEPSCLQMSPLQ 282
Query: 182 FLMPPIPGATAVPGIQMPGFPGQPLPMSMLRTPLGLMHKTNPVAGVSRAA 231
M G++ G++M P + P G P V+ AA
Sbjct: 283 -QMQTSAGSSGY-GLEMVVSNQYSPPGGPMSVPAGA--SVEPCLNVNGAA 328
>UNIPROTKB|Q2R0R9 [details] [associations]
symbol:LOC_Os11g41640 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240244 KEGG:dosa:Os11t0634700-00 Gramene:Q2R0R9
OMA:SLYAKRR Uniprot:Q2R0R9
Length = 246
Score = 154 (59.3 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 29/73 (39%), Positives = 53/73 (72%)
Query: 58 AVTVRGSKSNR--KKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAID 115
+V ++ S ++R K+ + + Y ++RR++IN+++R LQ+L+PN KVD ++MLEEA+
Sbjct: 146 SVVLKQSDNSRGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQ 205
Query: 116 YLKTLQFQVMMMS 128
Y+K LQ Q+ ++S
Sbjct: 206 YVKFLQLQIKLLS 218
>TAIR|locus:2205420 [details] [associations]
symbol:AT1G68920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AF488584 EMBL:AY128299
EMBL:BT002259 IPI:IPI00536565 IPI:IPI00545990 PIR:G96713
RefSeq:NP_001031255.1 RefSeq:NP_177058.1 RefSeq:NP_849863.2
UniGene:At.28096 ProteinModelPortal:Q9CAA9 SMR:Q9CAA9 STRING:Q9CAA9
EnsemblPlants:AT1G68920.1 EnsemblPlants:AT1G68920.2 GeneID:843225
KEGG:ath:AT1G68920 TAIR:At1g68920 eggNOG:NOG301979
HOGENOM:HOG000238007 InParanoid:Q3E6P7 OMA:MLKGGIF PhylomeDB:Q9CAA9
ProtClustDB:CLSN2682343 Genevestigator:Q9CAA9 Uniprot:Q9CAA9
Length = 486
Score = 160 (61.4 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 38/99 (38%), Positives = 58/99 (58%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 306 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 365
Query: 127 MSMGTGVCMPSMMLPT-GIIGMQ--QMHAVAPQMSHFPP 162
+SM P M G++ Q+ A + + FPP
Sbjct: 366 LSMKLATVNPQMDFNLEGLLAKDALQLRAGSSSTTPFPP 404
>TAIR|locus:505006688 [details] [associations]
symbol:AT5G50915 "AT5G50915" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB017063 EMBL:AF428350 EMBL:AY057549 EMBL:AY113059
EMBL:AY087602 IPI:IPI00536793 RefSeq:NP_568745.1 RefSeq:NP_851163.1
UniGene:At.23601 ProteinModelPortal:Q93W88 SMR:Q93W88
EnsemblPlants:AT5G50915.1 EnsemblPlants:AT5G50915.2 GeneID:835164
KEGG:ath:AT5G50915 TAIR:At5g50915 eggNOG:NOG262059
HOGENOM:HOG000242938 InParanoid:Q93W88 OMA:ISERMRT PhylomeDB:Q93W88
ProtClustDB:CLSN2689980 Genevestigator:Q93W88 Uniprot:Q93W88
Length = 286
Score = 155 (59.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 43/117 (36%), Positives = 65/117 (55%)
Query: 14 SSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTP 73
S++ + G + A N+ N K E EG + K E + ++ R + T
Sbjct: 90 SAITNTGKTRGRKARNSNNSK---EGVEGRKSKKQKRGSKEEPPTDYIH-VRARRGQAT- 144
Query: 74 EVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSM 129
+ H ER RR+KI+++MR LQ L+P C+KV KA ML+E I+Y++TLQ QV +SM
Sbjct: 145 DSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSM 201
>TAIR|locus:2118934 [details] [associations]
symbol:RSL2 "AT4G33880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0048766 "root hair initiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031032
EMBL:AL161584 HOGENOM:HOG000240244 GO:GO:0048766 EMBL:AF488616
EMBL:BT003137 EMBL:AK228110 IPI:IPI00526320 PIR:T05216
RefSeq:NP_195114.2 UniGene:At.31542 ProteinModelPortal:Q84WK0
SMR:Q84WK0 EnsemblPlants:AT4G33880.1 GeneID:829531
KEGG:ath:AT4G33880 TAIR:At4g33880 eggNOG:NOG318365
InParanoid:Q84WK0 OMA:TINTNSY PhylomeDB:Q84WK0
ProtClustDB:CLSN2680247 Genevestigator:Q84WK0 Uniprot:Q84WK0
Length = 352
Score = 157 (60.3 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 30/72 (41%), Positives = 47/72 (65%)
Query: 57 KAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDY 116
KA+ + G + + Y RKRR++IN+++R LQ L+PN KVD ++MLEEA+ Y
Sbjct: 258 KALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHY 317
Query: 117 LKTLQFQVMMMS 128
+K LQ Q+ ++S
Sbjct: 318 VKFLQLQIKLLS 329
>TAIR|locus:2014144 [details] [associations]
symbol:BEE1 "BR enhanced expression 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC013354
EMBL:AY138253 EMBL:AF488579 EMBL:AK117269 EMBL:BT005268
IPI:IPI00539846 RefSeq:NP_173276.2 UniGene:At.46141
ProteinModelPortal:Q8GZ13 SMR:Q8GZ13 IntAct:Q8GZ13
EnsemblPlants:AT1G18400.1 GeneID:838421 KEGG:ath:AT1G18400
TAIR:At1g18400 eggNOG:euNOG17991 HOGENOM:HOG000090950
InParanoid:Q8GZ13 PhylomeDB:Q8GZ13 ProtClustDB:CLSN2680013
Genevestigator:Q8GZ13 Uniprot:Q8GZ13
Length = 260
Score = 151 (58.2 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 43/126 (34%), Positives = 70/126 (55%)
Query: 5 KCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGS 64
K + P + SS + + N A T +L+R + ++ EK ER+ V VR
Sbjct: 94 KALLPTLSSSETSGVSDNTNVIATETGSLRRGKRLKKKKE---EEDEK--EREVVHVRA- 147
Query: 65 KSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQ 123
R+ + + H ER RR KIN+++R LQ+++P C K + A+ML+E I+Y+++LQ Q
Sbjct: 148 ---RRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQ 204
Query: 124 VMMMSM 129
V +SM
Sbjct: 205 VEFLSM 210
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 154 (59.3 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 57/197 (28%), Positives = 91/197 (46%)
Query: 9 PPVPSSSLCSLGASNNNPACNTFNLKRR--------YEDTEGSACPCDQYEKKLERKAVT 60
P + S CSLG++ + A + K + E+ + Q++ +++KA
Sbjct: 108 PGIQGSCPCSLGSTQDMDASWGKSRKHKRSNVGLKGLEEKKARRVVLHQHDDDVKKKAKE 167
Query: 61 VRGSKSN--------RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLE 111
G + R+ + + H ER RR+KI+++M+ LQ L+P C+KV KA ML+
Sbjct: 168 AAGGEPPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLD 227
Query: 112 EAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPP-----MG-I 165
E I Y+++LQ QV +SM P +M G G+ V Q++ P MG +
Sbjct: 228 EIISYVQSLQNQVEFLSMKLASLSP-LMYEFGP-GIDMHPDVLRQLAKMPHEMVQCMGQM 285
Query: 166 GMDGRMQMGAGCNPAQF 182
G G G G P F
Sbjct: 286 GSTGISLQGLGGGPTGF 302
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 151 (58.2 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 30/63 (47%), Positives = 46/63 (73%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KAS+L+E I+Y++ LQ QV
Sbjct: 139 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEF 198
Query: 127 MSM 129
+SM
Sbjct: 199 LSM 201
>UNIPROTKB|Q69JJ6 [details] [associations]
symbol:OSJNBa0026C08.22 "TA1 protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008215
ProtClustDB:CLSN2697804 EMBL:AP006169 EMBL:HQ858863 EMBL:AK121418
RefSeq:NP_001063455.1 UniGene:Os.38400
EnsemblPlants:LOC_Os09g29830.3 GeneID:4347355 KEGG:osa:4347355
Uniprot:Q69JJ6
Length = 428
Score = 154 (59.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 48/145 (33%), Positives = 73/145 (50%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 251 RRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 310
Query: 127 MSMGTGVCMPSMMLPT-GIIGMQQMH---------AVAPQMSHFPPMGIGMDGRMQMG-A 175
+SM P + L G++ + +P+M H P + + G + G A
Sbjct: 311 LSMKLATVNPRLDLNIEGLLSKDLLRFPGVPSSSIGFSPEMMH-PQLQLSQPGLIHGGTA 369
Query: 176 G-CNPAQFLMPPIPGATAVPGIQMP 199
G NP F A G QMP
Sbjct: 370 GMANPDVFRRIIQAQLGAKDGSQMP 394
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 151 (58.2 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 31/70 (44%), Positives = 49/70 (70%)
Query: 60 TVRG-SKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLK 118
T +G S++ R T + Y RKRR++IN++++ LQ L+PN KVD ++MLEEA+ Y+K
Sbjct: 211 TSKGKSRAGRGAAT-DPQSLYARKRRERINERLKTLQNLVPNGTKVDISTMLEEAVHYVK 269
Query: 119 TLQFQVMMMS 128
LQ Q+ ++S
Sbjct: 270 FLQLQIKLLS 279
>TAIR|locus:2199307 [details] [associations]
symbol:AT1G68240 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009686 "gibberellin biosynthetic process" evidence=RCA]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC016447
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AJ577585 EMBL:AY735551
EMBL:AY735552 EMBL:AY924719 IPI:IPI00528459 IPI:IPI00657054
IPI:IPI00919318 PIR:H96705 RefSeq:NP_001031251.1 RefSeq:NP_176991.2
UniGene:At.35550 ProteinModelPortal:Q5XVH0 SMR:Q5XVH0
EnsemblPlants:AT1G68240.1 GeneID:843153 KEGG:ath:AT1G68240
TAIR:At1g68240 eggNOG:NOG270610 HOGENOM:HOG000095221 OMA:EGTHEEE
PhylomeDB:Q5XVH0 ProtClustDB:CLSN2681409 Genevestigator:Q5XVH0
Uniprot:Q5XVH0
Length = 185
Score = 135 (52.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPN-CNKVDKASMLEEAIDYLKTLQFQVMM 126
+++R+ E E+KRR +I K+ LQ L+PN C K D AS LE I+Y+K+L++QV +
Sbjct: 64 KRQRSMEYRMMMEKKRRKEIKDKVDILQGLMPNHCTKPDLASKLENIIEYIKSLKYQVDV 123
Query: 127 MSM 129
MSM
Sbjct: 124 MSM 126
>TAIR|locus:2028804 [details] [associations]
symbol:CIB5 "AT1G26260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009911 "positive regulation of flower development"
evidence=IGI] [GO:0048513 "organ development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238007
EMBL:AK117355 EMBL:BT005334 EMBL:AJ630483 EMBL:AY568655
EMBL:AF488608 IPI:IPI00529982 IPI:IPI00547855 PIR:H86388
RefSeq:NP_001031093.1 RefSeq:NP_173950.1 RefSeq:NP_973913.1
UniGene:At.41276 ProteinModelPortal:Q9C670 SMR:Q9C670 IntAct:Q9C670
STRING:Q9C670 EnsemblPlants:AT1G26260.1 EnsemblPlants:AT1G26260.2
GeneID:839167 KEGG:ath:AT1G26260 TAIR:At1g26260 eggNOG:NOG284637
InParanoid:Q9C670 OMA:ETHGYES PhylomeDB:Q9C670
ProtClustDB:CLSN2682645 Genevestigator:Q9C670 Uniprot:Q9C670
Length = 390
Score = 152 (58.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 37/113 (32%), Positives = 62/113 (54%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ Q+
Sbjct: 226 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEF 285
Query: 127 MSMGTGVCMPSMMLPT-GIIGMQQMHAVAPQMSH-----FPPMG-IGMDGRMQ 172
+SM P + ++ + + AP H +PP+ + G MQ
Sbjct: 286 LSMKLSAVNPVLDFNLESLLAKDALQSSAPTFPHNMSMLYPPVSYLSQTGFMQ 338
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 148 (57.2 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 29/61 (47%), Positives = 45/61 (73%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KAS+L+E I+Y+++LQ QV
Sbjct: 131 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEF 190
Query: 127 M 127
M
Sbjct: 191 M 191
>UNIPROTKB|Q84QW1 [details] [associations]
symbol:OJ1191_A10.109 "BHLH transcription
factor(GBOF-1)-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP008214
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003888
RefSeq:NP_001062289.1 UniGene:Os.10830
EnsemblPlants:LOC_Os08g41320.1 GeneID:4346087 KEGG:osa:4346087
eggNOG:NOG320619 OMA:ERISQRM ProtClustDB:CLSN2697487 Uniprot:Q84QW1
Length = 405
Score = 152 (58.6 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 36/94 (38%), Positives = 55/94 (58%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 207 RRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEF 266
Query: 127 MSMGTGVCMPSMM--LPTGIIGMQQMHAVAPQMS 158
+SM P LPT ++ A P S
Sbjct: 267 LSMKLATVNPLDFSNLPT-LLQKDMFQACGPSAS 299
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 151 (58.2 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 38/109 (34%), Positives = 57/109 (52%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
RK + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 179 RKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQVEF 238
Query: 127 MSMGTGVCMPSMMLPT-GIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMG 174
+SM P + L ++ + P PMG M G
Sbjct: 239 LSMKLSAVNPRIDLDIESLVNNSKDVLRFPGQPSSAPMGFSFSTEMMPG 287
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 148 (57.2 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 30/63 (47%), Positives = 46/63 (73%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI++KM ALQ++IP CNK+ KA +L+E I+Y+++LQ QV
Sbjct: 156 RRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEF 215
Query: 127 MSM 129
+SM
Sbjct: 216 LSM 218
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 153 (58.9 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 38/109 (34%), Positives = 60/109 (55%)
Query: 21 ASNNNPACNTFNLKRRY--EDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKR 78
A+++NP+ NT K E S ++ K RG K + P H
Sbjct: 339 AASSNPSTNTQQEKSESCTEKRPVSLLAGAGIVSVVDEKRPRKRGRKPANGREEPLNHVE 398
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+K LQ +V +M
Sbjct: 399 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIM 447
>UNIPROTKB|Q6EPZ6 [details] [associations]
symbol:P0014G10.34 "BHLH transcription factor PTF1-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 HOGENOM:HOG000239571 EMBL:AP005784
RefSeq:NP_001175840.1 UniGene:Os.59658
EnsemblPlants:LOC_Os09g25040.1 GeneID:9272478 KEGG:osa:9272478
OMA:SMSVLTA Uniprot:Q6EPZ6
Length = 499
Score = 152 (58.6 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 32/60 (53%), Positives = 44/60 (73%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV---DKASMLEEAIDYLKTLQFQV 124
R+ + + H ER RR++I ++M+ALQEL+PN NK+ DKASML+E IDY+K LQ QV
Sbjct: 253 RRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQLQV 312
>TAIR|locus:2139484 [details] [associations]
symbol:CIB1 "AT4G34530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161585 EMBL:AL023094
HOGENOM:HOG000238007 EMBL:AF488596 EMBL:AK117846 EMBL:AY120741
EMBL:BT005313 IPI:IPI00519970 PIR:T05273 RefSeq:NP_195179.2
UniGene:At.48937 ProteinModelPortal:Q8GY61 SMR:Q8GY61
DIP:DIP-59356N IntAct:Q8GY61 PRIDE:Q8GY61 EnsemblPlants:AT4G34530.1
GeneID:829604 KEGG:ath:AT4G34530 TAIR:At4g34530 eggNOG:NOG251551
InParanoid:Q8GY61 OMA:SGYSHEM PhylomeDB:Q8GY61
ProtClustDB:CLSN2915063 Genevestigator:Q8GY61 Uniprot:Q8GY61
Length = 335
Score = 148 (57.2 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 37/117 (31%), Positives = 67/117 (57%)
Query: 23 NNNPACNTFNLKRRYEDTEGS-ACPCDQYEKKLERKA-VTVRGSKSNRKKRTPEVHKRYE 80
NN + +K + + E + + + K+LE+ + VR R+ + + H E
Sbjct: 132 NNGSTKSIKKMKHKAKKEENNFSNDSSKVTKELEKTDYIHVRA----RRGQATDSHSIAE 187
Query: 81 RKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVCMP 136
R RR+KI+++M+ LQ+L+P C+K+ KA ML+E I+Y+++LQ Q+ +SM + P
Sbjct: 188 RVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNP 244
>UNIPROTKB|Q6AV35 [details] [associations]
symbol:OSJNBa0063J18.7 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140
EMBL:AC107206 RefSeq:NP_001050667.1 UniGene:Os.79759
EnsemblPlants:LOC_Os03g42100.1 GeneID:4333457 KEGG:osa:4333457
eggNOG:NOG300710 OMA:CTSENDS ProtClustDB:CLSN2694086 Uniprot:Q6AV35
Length = 310
Score = 146 (56.5 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 28/71 (39%), Positives = 45/71 (63%)
Query: 58 AVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYL 117
A G + + + Y RKRR++IN++++ LQ L+PN KVD ++MLEEA+ Y+
Sbjct: 214 AAKSNGKAQSGHRSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAMHYV 273
Query: 118 KTLQFQVMMMS 128
K LQ Q+ ++S
Sbjct: 274 KFLQLQIKLLS 284
>TAIR|locus:2095198 [details] [associations]
symbol:AT3G23690 "AT3G23690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
EMBL:AP000377 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AY065441 EMBL:AY096536
EMBL:EU550216 EMBL:EU550217 EMBL:EU550218 EMBL:EU550219
EMBL:EU550220 EMBL:EU550221 EMBL:EU550222 EMBL:EU550223
EMBL:EU550224 EMBL:EU550225 EMBL:EU550226 EMBL:EU550227
EMBL:EU550228 EMBL:EU550229 EMBL:EU550230 EMBL:EU550231
EMBL:EU550232 EMBL:EU550233 EMBL:EU550234 EMBL:EU550235
EMBL:EU550236 EMBL:EU550237 EMBL:EU550238 EMBL:EU550239
EMBL:AF488609 IPI:IPI00545445 RefSeq:NP_189011.2 UniGene:At.6666
ProteinModelPortal:Q9LK48 SMR:Q9LK48 PaxDb:Q9LK48 PRIDE:Q9LK48
EnsemblPlants:AT3G23690.1 GeneID:821950 KEGG:ath:AT3G23690
TAIR:At3g23690 eggNOG:NOG292697 InParanoid:Q9LK48 OMA:MEFNANA
PhylomeDB:Q9LK48 ProtClustDB:CLSN2917952 Genevestigator:Q9LK48
Uniprot:Q9LK48
Length = 371
Score = 147 (56.8 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 30/72 (41%), Positives = 47/72 (65%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M LQ+L+P CN++ KA ML+E I+Y+++LQ QV
Sbjct: 194 RRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEF 253
Query: 127 MSMGTGVCMPSM 138
+SM P M
Sbjct: 254 LSMKLATVNPRM 265
>TAIR|locus:2202867 [details] [associations]
symbol:BPEp "AT1G59640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048446 "petal morphogenesis" evidence=IMP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AM269753 EMBL:AM269754
EMBL:AC009317 EMBL:BT003964 EMBL:BT005064 EMBL:AY086373
EMBL:AB028232 IPI:IPI00530097 IPI:IPI00531813 PIR:B96620 PIR:T52428
RefSeq:NP_564749.1 RefSeq:NP_849829.1 UniGene:At.455
ProteinModelPortal:Q0JXE7 SMR:Q0JXE7 IntAct:Q0JXE7 STRING:Q0JXE7
PRIDE:Q0JXE7 EnsemblPlants:AT1G59640.2 GeneID:842254
KEGG:ath:AT1G59640 TAIR:At1g59640 eggNOG:NOG296410
InParanoid:Q0JXE7 OMA:RGASPEW PhylomeDB:Q0JXE7
ProtClustDB:CLSN2688917 Genevestigator:Q0JXE7 GO:GO:0048446
Uniprot:Q0JXE7
Length = 343
Score = 146 (56.5 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 29/63 (46%), Positives = 46/63 (73%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 139 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 198
Query: 127 MSM 129
+SM
Sbjct: 199 LSM 201
>TAIR|locus:2027809 [details] [associations]
symbol:BEE3 "AT1G73830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000090950 ProtClustDB:CLSN2680013 EMBL:AF488585
EMBL:AC012679 EMBL:AK118781 EMBL:BT006055 IPI:IPI00541876
RefSeq:NP_177524.2 UniGene:At.34949 ProteinModelPortal:Q8GWK7
SMR:Q8GWK7 EnsemblPlants:AT1G73830.1 GeneID:843719
KEGG:ath:AT1G73830 TAIR:At1g73830 eggNOG:NOG264296
InParanoid:Q8GWK7 OMA:LENNFHQ PhylomeDB:Q8GWK7
Genevestigator:Q8GWK7 Uniprot:Q8GWK7
Length = 261
Score = 143 (55.4 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 32/80 (40%), Positives = 53/80 (66%)
Query: 51 EKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASM 109
E++ ER+ V VR R+ + + H ER RR KIN++++ LQ+++P C K + A+M
Sbjct: 137 EEEKEREVVHVRA----RRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATM 192
Query: 110 LEEAIDYLKTLQFQVMMMSM 129
L+E I+Y+++LQ QV +SM
Sbjct: 193 LDEIINYVQSLQNQVEFLSM 212
>TAIR|locus:2079676 [details] [associations]
symbol:AT3G07340 "AT3G07340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC009853 EMBL:AK175369 EMBL:AK175496
EMBL:AK176563 EMBL:AK176663 EMBL:BT026497 EMBL:AF488595
IPI:IPI00521004 RefSeq:NP_187390.1 UniGene:At.40357
ProteinModelPortal:Q9SRT2 SMR:Q9SRT2 EnsemblPlants:AT3G07340.1
GeneID:819922 KEGG:ath:AT3G07340 GeneFarm:2908 TAIR:At3g07340
eggNOG:NOG283912 InParanoid:Q9SRT2 OMA:MENELFM PhylomeDB:Q9SRT2
ProtClustDB:CLSN2684837 Genevestigator:Q9SRT2 Uniprot:Q9SRT2
Length = 456
Score = 148 (57.2 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 30/63 (47%), Positives = 46/63 (73%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 261 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 320
Query: 127 MSM 129
+SM
Sbjct: 321 LSM 323
>UNIPROTKB|Q8GZV6 [details] [associations]
symbol:OJ1017C11.10 "Putative uncharacterized protein
OJ1017C11.10" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001810
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50181 PROSITE:PS50888
SMART:SM00256 SMART:SM00353 GO:GO:0005634 SUPFAM:SSF81383
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR019955
PROSITE:PS50053 EMBL:AC135157 ProteinModelPortal:Q8GZV6
Gramene:Q8GZV6 Uniprot:Q8GZV6
Length = 776
Score = 151 (58.2 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVC 134
H ER RR+KIN++M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ QV +SM
Sbjct: 639 HSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTI 698
Query: 135 MPSM 138
P +
Sbjct: 699 SPEL 702
>TAIR|locus:2032990 [details] [associations]
symbol:CES "AT1G25330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:2000488 "positive regulation of brassinosteroid biosynthetic
process" evidence=IMP] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG264296 EMBL:AC079374 EMBL:DQ446289 EMBL:DQ652859
EMBL:AK175757 EMBL:AY088885 EMBL:AF488607 IPI:IPI00519962
PIR:B86383 PIR:D86381 RefSeq:NP_564229.1 UniGene:At.48236
UniGene:At.63980 ProteinModelPortal:A4D998 SMR:A4D998
EnsemblPlants:AT1G25330.1 GeneID:839117 KEGG:ath:AT1G25330
GeneFarm:2907 TAIR:At1g25330 InParanoid:A4D998 PhylomeDB:A4D998
Genevestigator:A4D998 GO:GO:2000488 Uniprot:A4D998
Length = 223
Score = 140 (54.3 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 41/128 (32%), Positives = 67/128 (52%)
Query: 34 KRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRA 93
+RR E A D+ +K + V VR + + + H ER RR+KIN++++
Sbjct: 79 RRRKRSEEEEAMNGDETQKP--KDVVHVRAKRG----QATDSHSLAERVRREKINERLKC 132
Query: 94 LQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMMMSM---GTGVC--MPSMML-PTGIIG 146
LQ+L+P C K + A ML+ IDY+++LQ Q+ +SM C + S+ + PT I
Sbjct: 133 LQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQ 192
Query: 147 MQQMHAVA 154
+H+ A
Sbjct: 193 GGNIHSAA 200
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 146 (56.5 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 44/126 (34%), Positives = 65/126 (51%)
Query: 25 NPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEV--HKRYERK 82
+PA KR D E A + ++L +K V G+ NR + + H ER+
Sbjct: 138 SPASCFVPWKRTELDKEAVAG--GEAAQRLLKKVVGGGGAWMNRAAGSCSIKNHVMSERR 195
Query: 83 RRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPT 142
RR+K+N+ L+ L+P+ +KVDKAS+L E I YLK L+ +V + G V P+ P
Sbjct: 196 RREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELESGKKVSRPAKRKPC 255
Query: 143 G--IIG 146
IIG
Sbjct: 256 SETIIG 261
>TAIR|locus:2053766 [details] [associations]
symbol:AT2G42300 "AT2G42300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005956 EMBL:AY065411 EMBL:AY096521 EMBL:AK175584
EMBL:AK176019 EMBL:AK176634 EMBL:AF488583 IPI:IPI00532521
PIR:C84852 RefSeq:NP_850368.1 UniGene:At.28495
ProteinModelPortal:Q8VZ02 SMR:Q8VZ02 EnsemblPlants:AT2G42300.1
GeneID:818831 KEGG:ath:AT2G42300 TAIR:At2g42300 eggNOG:NOG301522
HOGENOM:HOG000037005 InParanoid:Q8VZ02 OMA:PEWGREE PhylomeDB:Q8VZ02
ProtClustDB:CLSN2680198 Genevestigator:Q8VZ02 Uniprot:Q8VZ02
Length = 327
Score = 144 (55.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 30/70 (42%), Positives = 46/70 (65%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN +M+ LQEL+P C+K+ A +L+E I++++TLQ QV M
Sbjct: 188 RRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVEM 247
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 248 LSMRLAAVNP 257
>TAIR|locus:2152551 [details] [associations]
symbol:AT5G48560 "AT5G48560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB015468 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 eggNOG:NOG283912
ProtClustDB:CLSN2684837 EMBL:AF488610 EMBL:BT002945 EMBL:BT005637
IPI:IPI00543091 RefSeq:NP_199667.1 UniGene:At.43769
ProteinModelPortal:Q9FJL4 SMR:Q9FJL4 IntAct:Q9FJL4 PaxDb:Q9FJL4
PRIDE:Q9FJL4 EnsemblPlants:AT5G48560.1 GeneID:834912
KEGG:ath:AT5G48560 TAIR:At5g48560 InParanoid:Q9FJL4 OMA:SASCYAT
PhylomeDB:Q9FJL4 Genevestigator:Q9FJL4 Uniprot:Q9FJL4
Length = 498
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 30/63 (47%), Positives = 45/63 (71%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI ++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 304 RRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 363
Query: 127 MSM 129
+SM
Sbjct: 364 LSM 366
>UNIPROTKB|Q2QMN2 [details] [associations]
symbol:LOC_Os12g40590 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 EMBL:CM000149 eggNOG:NOG272270
KEGG:dosa:Os12t0597800-01 Uniprot:Q2QMN2
Length = 265
Score = 140 (54.3 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 34/105 (32%), Positives = 58/105 (55%)
Query: 48 DQYEKKLERKAVTVRGSKSNRKKRTP---EVHKRYERKRRDKINKKMRALQELIPNCNKV 104
++ +KKL + R K ++ +R P E H E++RR +IN+K + LQ L+P C+K
Sbjct: 127 EKMDKKLPTRTEERRRVK-HKARRNPGYAETHGLTEKRRRSRINEKFKMLQRLVPGCDKC 185
Query: 105 DKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQ 149
++S L+ I Y+K+LQ Q+ M P+M+ P + + Q
Sbjct: 186 SQSSTLDRTIHYMKSLQQQLQAM-------YPTMVRPAAVYPVVQ 223
>UNIPROTKB|Q8S490 [details] [associations]
symbol:rau1 "Transcription factor RAU1" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF465824
ProteinModelPortal:Q8S490 Gramene:Q8S490 Genevestigator:Q8S490
Uniprot:Q8S490
Length = 150
Score = 123 (48.4 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 68 RKKRTPEVHKRY--ERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQV 124
R KR H R ER RR +I++++R LQEL+PN +K + A ML+ A+DY+K LQ QV
Sbjct: 70 RAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQV 129
Query: 125 MMMSMGTGVC 134
++ C
Sbjct: 130 KGLNDSRANC 139
>UNIPROTKB|Q5VR96 [details] [associations]
symbol:P0038C05.31-1 "Os06g0275600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003044 RefSeq:NP_001057380.1 UniGene:Os.32526
EnsemblPlants:LOC_Os06g16400.1 EnsemblPlants:LOC_Os06g16400.2
GeneID:4340749 KEGG:osa:4340749 ProtClustDB:CLSN2697804
Uniprot:Q5VR96
Length = 437
Score = 142 (55.0 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 30/72 (41%), Positives = 48/72 (66%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 263 RRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 322
Query: 127 MSMGTGVCMPSM 138
+SM P++
Sbjct: 323 LSMKLASVNPTL 334
Score = 38 (18.4 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 131 TGVCMPSMMLPTGIIGMQQMHA 152
T V MPS++ PT G + +HA
Sbjct: 375 TQVGMPSIVNPTDAFG-RVIHA 395
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 140 (54.3 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 40/112 (35%), Positives = 60/112 (53%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVC 134
H ER RR KI+++M+ LQ+L+P C+K+ KA ML+E I+Y+++LQ QV +SM
Sbjct: 158 HSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLATV 217
Query: 135 MPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFLMPP 186
P + I +QM + Q H G+ G + A N Q +M P
Sbjct: 218 NPELSFDIEQILSKQM--MLSQDRHLAFYGVD-PGSSALVAHFN--QGIMQP 264
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 135 (52.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 38/112 (33%), Positives = 58/112 (51%)
Query: 60 TVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKT 119
TV+ K + + + R RR++I++++R LQ L+P K+D ASML+EAI Y+K
Sbjct: 114 TVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKF 173
Query: 120 LQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQ-MSHFPPMGIGMDGR 170
L+ Q+ +++ TG P P Q AV +S PP G GR
Sbjct: 174 LKRQIRLLNNNTGYTPPP---PQD----QASQAVTTSWVSPPPPPSFGRGGR 218
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 141 (54.7 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 26/76 (34%), Positives = 51/76 (67%)
Query: 51 EKKLERKAVTVRGSKSNRKKRTPEV--HKRYERKRRDKINKKMRALQELIPNCNKVDKAS 108
E+K RK T R + + ++K P V H E++RR+K+N + AL+ ++P +++DKAS
Sbjct: 223 ERKRRRKLETTRVAAATKEKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKAS 282
Query: 109 MLEEAIDYLKTLQFQV 124
+L +A+ Y+++L+ ++
Sbjct: 283 LLSDAVSYIESLKSKI 298
>TAIR|locus:2090679 [details] [associations]
symbol:AT3G19500 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB025624 EMBL:AY084520 EMBL:AF488631 IPI:IPI00518921
RefSeq:NP_566639.1 UniGene:At.38400 ProteinModelPortal:Q9LT67
SMR:Q9LT67 EnsemblPlants:AT3G19500.1 GeneID:821484
KEGG:ath:AT3G19500 TAIR:At3g19500 eggNOG:NOG294378
HOGENOM:HOG000240890 OMA:HVENSNG PhylomeDB:Q9LT67
ProtClustDB:CLSN2688564 Genevestigator:Q9LT67 Uniprot:Q9LT67
Length = 270
Score = 136 (52.9 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 54/213 (25%), Positives = 96/213 (45%)
Query: 2 DAGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAV-T 60
D +EP VP+S G S+ +P+C + + AC D+ K +K T
Sbjct: 76 DESLFLEPSVPTS-----GVSDLDPSCIKIDCRN-----SNDACTVDKSTKSSTKKRTGT 125
Query: 61 VRGSKSNRKKRTPEVHKRYERK--------RRDKINKKMRALQELIPNCNKVDKASMLEE 112
G +S++ ++ + KR + K R++++ +++ ALQ+L+ K D AS+L E
Sbjct: 126 GNGQESDQNRKPGKKGKRNQEKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHE 185
Query: 113 AIDYLKTLQFQVMMMSMGTGVCMPSMM---LPTGIIGMQQMHAV-APQMSHFPPMGIGMD 168
A+ Y+K LQ Q+ ++ C P ++ L G++ M A+ A + + +
Sbjct: 186 AMGYIKFLQDQIQVL------CSPYLINHSLDGGVVTGDVMAAMKAKDLRSRGLCLVPVS 239
Query: 169 GRMQMGAGCNPAQFLMPPIPGATAVPGIQMPGF 201
+ + N A F P G T P + GF
Sbjct: 240 STVHV-ENSNGADFWSPATMGHTTSPSLPQ-GF 270
>TAIR|locus:2156015 [details] [associations]
symbol:RSL1 "AT5G37800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006063 ProtClustDB:CLSN2681768 EMBL:AB016873
IPI:IPI00523734 RefSeq:NP_198596.1 UniGene:At.55195
ProteinModelPortal:Q9FJ00 SMR:Q9FJ00 EnsemblPlants:AT5G37800.1
GeneID:833758 KEGG:ath:AT5G37800 TAIR:At5g37800 eggNOG:NOG303056
InParanoid:Q9FJ00 OMA:MDFNASS PhylomeDB:Q9FJ00
Genevestigator:Q9FJ00 Uniprot:Q9FJ00
Length = 307
Score = 135 (52.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 36/103 (34%), Positives = 58/103 (56%)
Query: 32 NLKRRYEDTE----GSACPCDQYEKKLERKAVTVRGSKSNRKKRT-PEVHKRYERK-RRD 85
N+ R+E T G+ P +L +K + K K T P+ + K RR+
Sbjct: 162 NIGSRHESTSPKLAGNKRPFTGENTQLSKKPSSGTNGKIKPKATTSPKDPQSLAAKNRRE 221
Query: 86 KINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+I+++++ LQEL+PN KVD +MLE+AI Y+K LQ QV +++
Sbjct: 222 RISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVLA 264
>UNIPROTKB|E9PKF0 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000060 "protein import
into nucleus, translocation" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0001190
"RNA polymerase II transcription factor binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0016604 "nuclear
body" evidence=IEA] [GO:0032922 "circadian regulation of gene
expression" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0043425 "bHLH transcription
factor binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] InterPro:IPR001067
InterPro:IPR011598 Pfam:PF00010 PRINTS:PR00785 PROSITE:PS50888
SMART:SM00353 GO:GO:0005737 GO:GO:0003677 GO:GO:0007623
GO:GO:0005667 GO:GO:0000060 GO:GO:0000982 GO:GO:0001190
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0042176 EMBL:AC016884
EMBL:AC022878 IPI:IPI00413132 HGNC:HGNC:701
ProteinModelPortal:E9PKF0 SMR:E9PKF0 Ensembl:ENST00000529388
ArrayExpress:E9PKF0 Bgee:E9PKF0 Uniprot:E9PKF0
Length = 135
Score = 113 (44.8 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCN----KVDKASMLEEAIDYLKTLQ 121
R K E H + E++RRDK+N + L L+P CN K+DK ++L A+ ++KTL+
Sbjct: 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
>UNIPROTKB|E9PPV4 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR001067
InterPro:IPR011598 Pfam:PF00010 PRINTS:PR00785 PROSITE:PS50888
SMART:SM00353 GO:GO:0005737 GO:GO:0003700 GO:GO:0005667
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC016884 EMBL:AC022878
HGNC:HGNC:701 IPI:IPI00978797 ProteinModelPortal:E9PPV4 SMR:E9PPV4
Ensembl:ENST00000530357 ArrayExpress:E9PPV4 Bgee:E9PPV4
Uniprot:E9PPV4
Length = 141
Score = 113 (44.8 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCN----KVDKASMLEEAIDYLKTLQ 121
R K E H + E++RRDK+N + L L+P CN K+DK ++L A+ ++KTL+
Sbjct: 26 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 83
>UNIPROTKB|Q6ZFY4 [details] [associations]
symbol:OJ1311_H06.19 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003983
EMBL:AP004161 Uniprot:Q6ZFY4
Length = 298
Score = 131 (51.2 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 64 SKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQ 123
+KS T + + RR++I++++R LQEL+PN KVD +MLE+AI Y+K LQ Q
Sbjct: 196 AKSAPTTPTKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQ 255
Query: 124 VMMMS 128
V +++
Sbjct: 256 VKVLA 260
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 134 (52.2 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 38 EDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQEL 97
ED G D KK TV G +KK P + ER+RR K+N ++ L+ +
Sbjct: 302 EDARGGE---DSGAKKESNANSTVTGDGKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSV 358
Query: 98 IPNCNKVDKASMLEEAIDYLKTL 120
+P +K+D+AS+L +AI+YLK L
Sbjct: 359 VPKISKMDRASILGDAIEYLKEL 381
>TAIR|locus:2008693 [details] [associations]
symbol:FBH1 "AT1G35460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488612 EMBL:AC023064 EMBL:AF411791 EMBL:AY093794
IPI:IPI00538359 PIR:F86475 RefSeq:NP_174776.1 UniGene:At.18017
ProteinModelPortal:Q9C8P8 SMR:Q9C8P8 PRIDE:Q9C8P8
EnsemblPlants:AT1G35460.1 GeneID:840438 KEGG:ath:AT1G35460
TAIR:At1g35460 eggNOG:NOG263612 HOGENOM:HOG000095218
InParanoid:Q9C8P8 OMA:NLCLTEL PhylomeDB:Q9C8P8
ProtClustDB:CLSN2679906 Genevestigator:Q9C8P8 Uniprot:Q9C8P8
Length = 259
Score = 128 (50.1 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 68 RKKRTPEVHKRY--ERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQV 124
R KR H R ER RR +I+ ++R LQEL+PN +K + A MLEEA++Y+K LQ Q+
Sbjct: 182 RAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQI 241
Query: 125 MMMS 128
++
Sbjct: 242 QELT 245
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 134 (52.2 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 32/92 (34%), Positives = 53/92 (57%)
Query: 38 EDTEGSACPCDQYEKKLERKAVTVRGSKSNRK----KRTPEVHKRYERKRRDKINKKMRA 93
+ T G + D ++ AV R K RK + P H ER+RR+K+N++ A
Sbjct: 411 DKTAGESDHSDLEASVVKEVAVEKRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYA 470
Query: 94 LQELIPNCNKVDKASMLEEAIDYLKTLQFQVM 125
L+ ++PN +K+DKAS+L +AI Y+ L+ +V+
Sbjct: 471 LRAVVPNVSKMDKASLLGDAIAYINELKSKVV 502
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 123 (48.4 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 60 TVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKT 119
TVR K + + + R RR++I++++R LQ L+P K+D ASML+EAI Y+K
Sbjct: 146 TVRPPKRRNVRISTDPQSVAARMRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKF 205
Query: 120 LQFQVMMM 127
L+ QV +
Sbjct: 206 LKTQVQSL 213
Score = 38 (18.4 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 185 PPIPGAT--AVPGIQMPGFPGQ 204
PP P AT A + PG GQ
Sbjct: 224 PPPPTATSAAAATVAYPGLNGQ 245
>TAIR|locus:2028957 [details] [associations]
symbol:RHD6 "AT1G66470" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0048766 "root
hair initiation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048766 EMBL:AC074025
EMBL:AY128310 EMBL:BT006320 EMBL:AF488615 IPI:IPI00529158
PIR:C96690 RefSeq:NP_176820.1 UniGene:At.35765
ProteinModelPortal:Q9C707 SMR:Q9C707 IntAct:Q9C707
EnsemblPlants:AT1G66470.1 GeneID:842965 KEGG:ath:AT1G66470
TAIR:At1g66470 eggNOG:NOG301765 HOGENOM:HOG000006063
InParanoid:Q9C707 OMA:HESFPPP PhylomeDB:Q9C707
ProtClustDB:CLSN2681768 Genevestigator:Q9C707 Uniprot:Q9C707
Length = 298
Score = 129 (50.5 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 39/116 (33%), Positives = 65/116 (56%)
Query: 14 SSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTP 73
S++ + G+ N + + + KR + T S P KKL VT G + +P
Sbjct: 152 STVVTTGSRNESLSPKSAGNKRSH--TGESTQP----SKKLS-SGVT--GKTKPKPTTSP 202
Query: 74 EVHKRYERK-RRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+ + K RR++I+++++ LQEL+PN KVD +MLE+AI Y+K LQ QV +++
Sbjct: 203 KDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLA 258
>TAIR|locus:2141573 [details] [associations]
symbol:FBH2 "AT4G09180" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL161514 HOGENOM:HOG000095218 ProtClustDB:CLSN2679906
EMBL:AF488613 EMBL:BT010423 EMBL:AK230384 IPI:IPI00545642
PIR:B85093 RefSeq:NP_192657.1 UniGene:At.33710
ProteinModelPortal:Q9M0R0 SMR:Q9M0R0 PaxDb:Q9M0R0 PRIDE:Q9M0R0
EnsemblPlants:AT4G09180.1 GeneID:826499 KEGG:ath:AT4G09180
TAIR:At4g09180 eggNOG:NOG277140 InParanoid:Q9M0R0 OMA:MENLMED
PhylomeDB:Q9M0R0 Genevestigator:Q9M0R0 Uniprot:Q9M0R0
Length = 262
Score = 127 (49.8 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 68 RKKRTPEVHKRY--ERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQV 124
R KR H R ER RR +I+ ++R LQEL+PN +K + A MLEEA++Y+K LQ Q+
Sbjct: 185 RAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQI 244
Query: 125 MMMS 128
++
Sbjct: 245 QELT 248
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 132 (51.5 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 54 LERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEA 113
LE+K RG K + P H ER RR+K+N + AL+ ++PN +K+DK S+LE+A
Sbjct: 322 LEKKKGKKRGRKPAHGRDKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDA 381
Query: 114 IDYLKTLQ 121
+ Y+ L+
Sbjct: 382 VCYINELK 389
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 133 (51.9 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 33/92 (35%), Positives = 53/92 (57%)
Query: 32 NLKRRYEDTEGS--ACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINK 89
+L+ + E S P + EK+ RK RG K + P H ER+RR+K+N+
Sbjct: 484 DLEASVREVESSRVVAPPPEAEKR-PRK----RGRKPANGREEPLNHVEAERQRREKLNQ 538
Query: 90 KMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
+ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 539 RFYALRAVVPNVSKMDKASLLGDAISYINELR 570
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 128 (50.1 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 28/62 (45%), Positives = 42/62 (67%)
Query: 66 SNRKKRTPEVHKRY---ERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQF 122
+N +R P + K + ERKRR K+N+++ AL L+P K DKA++LE+AI +LK LQ
Sbjct: 120 NNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQE 179
Query: 123 QV 124
+V
Sbjct: 180 RV 181
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 57 KAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDY 116
++V + G +KK P + ER+RR K+N ++ L+ ++P +K+D+AS+L +AIDY
Sbjct: 289 ESVQIGGGGKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDY 348
Query: 117 LKTL 120
LK L
Sbjct: 349 LKEL 352
>UNIPROTKB|Q651K2 [details] [associations]
symbol:B1089G05.30 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CM000143 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005967 EnsemblPlants:LOC_Os06g30090.1 Uniprot:Q651K2
Length = 294
Score = 125 (49.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 64 SKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQ 123
SK R E + RR++I++++RALQEL+P+ KVD +ML+ AI Y+K +Q Q
Sbjct: 189 SKKQRANNK-ETQSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISYVKFMQMQ 247
Query: 124 VMMM 127
+ ++
Sbjct: 248 LRVL 251
>UNIPROTKB|Q6ZA99 [details] [associations]
symbol:P0431A03.9 "Os08g0432800 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:AP008214 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP004666 EMBL:AK109616 RefSeq:NP_001061870.1
UniGene:Os.56209 EnsemblPlants:LOC_Os08g33590.1 GeneID:4345648
KEGG:osa:4345648 eggNOG:NOG311977 OMA:TSAMMED
ProtClustDB:CLSN2697339 Uniprot:Q6ZA99
Length = 345
Score = 126 (49.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM-----SMG 130
H ER+RR +IN + L+ L+PN K DKAS+L E I+++K L+ Q M + G
Sbjct: 125 HSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTSAMMEDGAAGG 184
Query: 131 TGVCMPSMMLPT 142
P ++LPT
Sbjct: 185 EAAAAPVVLLPT 196
>TAIR|locus:2084339 [details] [associations]
symbol:AIF2 "ATBS1 Interacting Factor 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR011598 PROSITE:PS50888 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC020580 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000237706 EMBL:AY081288 EMBL:AY093390 EMBL:AY088744
IPI:IPI00538343 RefSeq:NP_566287.1 RefSeq:NP_974239.1
UniGene:At.25233 ProteinModelPortal:Q9C8Z9 SMR:Q9C8Z9 IntAct:Q9C8Z9
PaxDb:Q9C8Z9 PRIDE:Q9C8Z9 EnsemblPlants:AT3G06590.1
EnsemblPlants:AT3G06590.2 GeneID:819838 KEGG:ath:AT3G06590
GeneFarm:3391 TAIR:At3g06590 eggNOG:NOG272013 InParanoid:Q9C8Z9
OMA:HEIYSSK PhylomeDB:Q9C8Z9 ProtClustDB:CLSN2688117
Genevestigator:Q9C8Z9 Uniprot:Q9C8Z9
Length = 221
Score = 121 (47.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 29/70 (41%), Positives = 40/70 (57%)
Query: 60 TVRGSKSNR-KKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLK 118
TV S SNR +KR V R +K +N+K+R L L+P C K +LEEA DY++
Sbjct: 137 TVVSSSSNRSRKRRVSV-LRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEATDYIQ 195
Query: 119 TLQFQVMMMS 128
L+ QV M+
Sbjct: 196 ALEMQVRAMN 205
>UNIPROTKB|Q9ASJ3 [details] [associations]
symbol:P0439B06.24 "Putative uncharacterized protein
P0439B06.24" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP002882 UniGene:Os.30617
ProteinModelPortal:Q9ASJ3 Gramene:Q9ASJ3 OMA:KAITYVK
ProtClustDB:CLSN2918925 Uniprot:Q9ASJ3
Length = 294
Score = 124 (48.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 22/46 (47%), Positives = 38/46 (82%)
Query: 83 RRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
RR++I+++++ LQ+L+PN KVD +MLE+AI+Y+K LQ QV +++
Sbjct: 216 RRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLA 261
>UNIPROTKB|Q8S0N2 [details] [associations]
symbol:P0692C11.41-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 EMBL:AP003381 EMBL:AP003273 EMBL:AK106119
RefSeq:NP_001044022.1 UniGene:Os.25546 GeneID:4327679
KEGG:osa:4327679 eggNOG:NOG254276 OMA:EPDMEAM
ProtClustDB:CLSN2919059 Uniprot:Q8S0N2
Length = 393
Score = 126 (49.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM-SMGT 131
R RR++++ ++R LQ+L+P NK+D ASML+EA YLK L+ QV + ++GT
Sbjct: 291 RLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKLETLGT 342
>UNIPROTKB|Q69TX2 [details] [associations]
symbol:P0021C04.13 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP004687
ProteinModelPortal:Q69TX2 EnsemblPlants:LOC_Os06g10820.1
Gramene:Q69TX2 HOGENOM:HOG000241748 Uniprot:Q69TX2
Length = 211
Score = 119 (46.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 55 ERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAI 114
E +A R + N + + E R RR++++++MRALQ L+P ++D ASMLEEAI
Sbjct: 105 EEEAAAPRPRRRNARVSS-EPQSVAARLRRERVSQRMRALQRLVPGGARLDTASMLEEAI 163
Query: 115 DYLKTLQFQVMMM 127
Y+K L+ V +
Sbjct: 164 RYVKFLKGHVQSL 176
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 123 (48.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 22/48 (45%), Positives = 37/48 (77%)
Query: 80 ERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
ER RR K+N+K+ AL+ ++PN K+DKAS++++AI+Y++ LQ + M
Sbjct: 98 ERDRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYIQRLQAEEQQM 145
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 124 (48.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 35/122 (28%), Positives = 62/122 (50%)
Query: 13 SSSLCSLGASNNNP---ACNTFNLKRRYEDTEGSACPCDQ-------YEKKLERKAVTVR 62
+++ S G + + P + LK + E + +A P Q Y+ +
Sbjct: 110 AAAFASAGQAQSAPYYGGASAAALKPKQE-LDAAAAPFSQARPVKRSYDAMVAADVAKAP 168
Query: 63 GSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQF 122
+ ++R + H ERKRR+K++++ AL +++P K+DKAS+L +AI Y+K LQ
Sbjct: 169 AAAASRPASQNQEHILAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQD 228
Query: 123 QV 124
QV
Sbjct: 229 QV 230
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 127 (49.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ +L+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 403 RGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELK 462
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 127 (49.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ +L+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 402 RGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELK 461
>TAIR|locus:2152262 [details] [associations]
symbol:BIM3 "AT5G38860" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000070523 EMBL:AB009048 EMBL:AJ630499 EMBL:AY568671
EMBL:BT033131 IPI:IPI00534511 RefSeq:NP_198702.2 UniGene:At.50495
ProteinModelPortal:Q9FMB6 SMR:Q9FMB6 IntAct:Q9FMB6 PRIDE:Q9FMB6
EnsemblPlants:AT5G38860.1 GeneID:833877 KEGG:ath:AT5G38860
TAIR:At5g38860 eggNOG:NOG267159 InParanoid:Q9FMB6 OMA:TETRSFC
PhylomeDB:Q9FMB6 ProtClustDB:CLSN2918639 Genevestigator:Q9FMB6
Uniprot:Q9FMB6
Length = 298
Score = 122 (48.0 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 38/118 (32%), Positives = 58/118 (49%)
Query: 48 DQYEKKLERKAVTVRGSKSNRKKRTP--EVHKRYERKRRDKINKKMRALQELIP---NCN 102
DQ E + + S + R+ R H E++RR KIN++ ++L ++IP N
Sbjct: 8 DQLEADVYSNLPSRNDSSTGRRNRNSCRSKHSETEQRRRSKINERFQSLMDIIPQNQNDQ 67
Query: 103 KVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMH-AVAPQMSH 159
K DKAS L E I+Y+ LQ +V M + S PT +I + H +VA + H
Sbjct: 68 KRDKASFLLEVIEYIHFLQEKVHMYEDSHQMWYQS---PTKLIPWRNSHGSVAEENDH 122
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 126 (49.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 28/66 (42%), Positives = 45/66 (68%)
Query: 60 TVRGSKSNRKKRTP-EVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLK 118
T RGS++ + + + H ER+RR+K+N+ L+ ++P+ +KVDKAS+LEE I YLK
Sbjct: 376 TGRGSRAALTQESGIKNHVISERRRREKLNEMFLILKSIVPSIHKVDKASILEETIAYLK 435
Query: 119 TLQFQV 124
L+ +V
Sbjct: 436 VLEKRV 441
>TAIR|locus:2059979 [details] [associations]
symbol:FBH4 "AT2G42280" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0046685
"response to arsenic-containing substance" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC002561 GO:GO:0048573
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG312535
HOGENOM:HOG000242890 EMBL:BT015339 EMBL:BT015712 EMBL:AK228981
IPI:IPI00530686 IPI:IPI00538142 PIR:T00937 RefSeq:NP_181757.2
RefSeq:NP_973670.1 UniGene:At.12448 UniGene:At.43726
ProteinModelPortal:Q66GR3 SMR:Q66GR3 PRIDE:Q66GR3
EnsemblPlants:AT2G42280.1 GeneID:818829 KEGG:ath:AT2G42280
TAIR:At2g42280 InParanoid:Q66GR3 OMA:NDNRANC PhylomeDB:Q66GR3
ProtClustDB:CLSN2681218 Genevestigator:Q66GR3 Uniprot:Q66GR3
Length = 359
Score = 123 (48.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 68 RKKRTPEVHKRY--ERKRRDKINKKMRALQELIPNCNKVDKAS-MLEEAIDYLKTLQFQV 124
R KR H R ER RR +I+++MR LQEL+PN +K S ML+ A+DY+K LQ Q
Sbjct: 280 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQY 339
Query: 125 MMMSMGTGVC 134
+++ C
Sbjct: 340 KILNDNRANC 349
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 124 (48.7 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCM 135
H ER+RR+K+N+ L+ L+P+ KVDKAS+L E I YLK L+ +V + +
Sbjct: 379 HVMSERRRREKLNEMFLILKSLLPSVRKVDKASILAETITYLKVLEKRVKELESSSRE-- 436
Query: 136 PSMMLPTGI 144
PS PT I
Sbjct: 437 PSRWRPTEI 445
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 124 (48.7 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 24/63 (38%), Positives = 41/63 (65%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ +Q
Sbjct: 307 RGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQ 366
Query: 122 FQV 124
++
Sbjct: 367 KKI 369
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 124 (48.7 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 26/69 (37%), Positives = 43/69 (62%)
Query: 59 VTVRGSKSNRKKRTPEV---HKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAID 115
V + K TPE H E+KRR+K+N++ L+ +IP+ +K+DK S+L++ I+
Sbjct: 386 VPLMNKKEELLPDTPEETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIE 445
Query: 116 YLKTLQFQV 124
YL+ LQ +V
Sbjct: 446 YLQDLQKRV 454
>TAIR|locus:2089418 [details] [associations]
symbol:AT3G21330 "AT3G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP001305 EMBL:AF488617 EMBL:BT004279 EMBL:BT020364
IPI:IPI00541948 RefSeq:NP_188770.1 UniGene:At.38078
ProteinModelPortal:Q8S3D2 SMR:Q8S3D2 EnsemblPlants:AT3G21330.1
GeneID:821687 KEGG:ath:AT3G21330 TAIR:At3g21330 eggNOG:NOG330001
HOGENOM:HOG000095219 InParanoid:Q9LIG3 OMA:LMARELC PhylomeDB:Q8S3D2
ProtClustDB:CLSN2685101 Genevestigator:Q8S3D2 Uniprot:Q8S3D2
Length = 373
Score = 121 (47.7 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 24/44 (54%), Positives = 35/44 (79%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQV 124
R+RR++I++K+R LQ L+P K+D ASML+EA +YLK L+ QV
Sbjct: 285 RQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQV 328
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 120 (47.3 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 49 QYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKAS 108
Q + RK T R +R + + H ERKRR+K+ ++ AL L+P K+DKAS
Sbjct: 127 QKSDEFNRKG-TKRAQPFSRNQSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKAS 185
Query: 109 MLEEAIDYLKTLQFQV 124
+L +A+ ++K LQ +V
Sbjct: 186 VLGDALKHIKYLQERV 201
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 117 (46.2 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 61 VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
VR K + + + R RR++I++++R LQ L+P K+D ASML+EAI Y+K L
Sbjct: 137 VRPPKRRNVRISKDPQSVAARLRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFL 196
Query: 121 QFQVMMM 127
+ QV +
Sbjct: 197 KSQVQSL 203
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 124 (48.7 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 21/49 (42%), Positives = 38/49 (77%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQV 124
H E+KRR+K+N++ L+++IP+ NK+DK S+L++ I+YL+ L+ +V
Sbjct: 442 HAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRV 490
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 119 (46.9 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 60 TVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKT 119
T R R + + H ERKRR+K+ ++ AL LIP K+DKAS+L +AI ++K
Sbjct: 111 TKRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKY 170
Query: 120 LQFQV 124
LQ V
Sbjct: 171 LQESV 175
>TAIR|locus:2205455 [details] [associations]
symbol:BIM2 "AT1G69010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011665 EMBL:BT002352 EMBL:AY080650 EMBL:AY086798
EMBL:AF488627 IPI:IPI00519398 PIR:E96714 RefSeq:NP_177064.1
UniGene:At.35458 ProteinModelPortal:Q9CAA4 SMR:Q9CAA4 PaxDb:Q9CAA4
PRIDE:Q9CAA4 EnsemblPlants:AT1G69010.1 GeneID:843233
KEGG:ath:AT1G69010 TAIR:At1g69010 eggNOG:NOG246683
HOGENOM:HOG000070523 InParanoid:Q9CAA4 OMA:YVQYLQE PhylomeDB:Q9CAA4
ProtClustDB:CLSN2682349 Genevestigator:Q9CAA4 GermOnline:AT1G69010
Uniprot:Q9CAA4
Length = 311
Score = 119 (46.9 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 51/154 (33%), Positives = 69/154 (44%)
Query: 62 RGSKSNRKKRT-PEVHKRYERKRRDKINKKMRALQELIPNCN-KVDKASMLEEAIDYLKT 119
R SK N K H E++RR KIN++ + L+ELIPN K D AS L E IDY++
Sbjct: 35 RDSKENDKASAIRSKHSVTEQRRRSKINERFQILRELIPNSEQKRDTASFLLEVIDYVQY 94
Query: 120 LQFQVMMMSMG-TGVCM-PSMMLP--TGIIGMQQM--HAVAPQMSHFPPMGIGMDGRMQM 173
LQ +V G P+ + P +Q + H VA P GI G+ +
Sbjct: 95 LQEKVQKYEGSYPGWSQEPTKLTPWRNNHWRVQSLGNHPVAINNGSGP--GIPFPGKFED 152
Query: 174 GAGCN-PAQFLMPPIP----GATAVPGIQMPGFP 202
+ PA P IP A A+ GI + P
Sbjct: 153 NTVTSTPAIIAEPQIPIESDKARAITGISIESQP 186
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 116 (45.9 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R RR++I++++R LQ L+P K+D ASML+EAI Y+K L+ QV +
Sbjct: 135 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 181
>TAIR|locus:2065086 [details] [associations]
symbol:AT2G40200 "AT2G40200" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AF085279 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488586 EMBL:BT029997 EMBL:BT030051
IPI:IPI00547467 PIR:E84826 RefSeq:NP_181549.1 UniGene:At.37090
ProteinModelPortal:Q9XEF0 SMR:Q9XEF0 EnsemblPlants:AT2G40200.1
GeneID:818611 KEGG:ath:AT2G40200 TAIR:At2g40200 eggNOG:NOG318931
HOGENOM:HOG000095217 InParanoid:Q9XEF0 OMA:QPETISD PhylomeDB:Q9XEF0
ProtClustDB:CLSN2913057 ArrayExpress:Q9XEF0 Genevestigator:Q9XEF0
Uniprot:Q9XEF0
Length = 254
Score = 117 (46.2 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 37/120 (30%), Positives = 63/120 (52%)
Query: 2 DAGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTV 61
D+ K + P SL + +++ N FNL + G P D +E KA ++
Sbjct: 6 DSSKWSDSTTPYMVSWSLQSESSDSDWNRFNLGFS-SSSFGGNFPADDCVGGIE-KAESL 63
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
S+S H+ E++RRD+IN + AL++L+PN +K+DKA++L I+ +K L+
Sbjct: 64 --SRS---------HRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELK 112
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 116 (45.9 bits), Expect = 0.00010, P = 0.00010
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R RR++I++++R LQ L+P K+D ASML+EAI Y+K L+ QV +
Sbjct: 138 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 184
>ZFIN|ZDB-GENE-000509-1 [details] [associations]
symbol:arntl1a "aryl hydrocarbon receptor nuclear
translocator-like 1a" species:7955 "Danio rerio" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0009648 "photoperiodism" evidence=IEP]
[GO:0007623 "circadian rhythm" evidence=IGI] [GO:0009416 "response
to light stimulus" evidence=IGI] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-000509-1
GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0003677
GO:GO:0007623 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 HOVERGEN:HBG107503 KO:K02296 OMA:EKINTNC GO:GO:0009648
EMBL:CR759966 EMBL:AF144689 EMBL:AF144690 IPI:IPI00490446
RefSeq:NP_571652.1 UniGene:Dr.75458 DIP:DIP-46453N STRING:Q9I879
Ensembl:ENSDART00000023959 Ensembl:ENSDART00000148660 GeneID:58098
KEGG:dre:58098 CTD:58098 InParanoid:Q9I879 NextBio:20892352
Uniprot:Q9I879
Length = 626
Score = 121 (47.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 35/115 (30%), Positives = 58/115 (50%)
Query: 13 SSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLER-KAVTV-RGSKSNRKK 70
S S L +S+ +N KR+ TE ++ ++ K T+ R + R K
Sbjct: 17 SQSSADLISSSIGTTGMDYNRKRKGSTTEYQIDGFS-FDDSMDTDKDKTLGRDEQQGRIK 75
Query: 71 RTPEVHKRYERKRRDKINKKMRALQELIPNCN----KVDKASMLEEAIDYLKTLQ 121
E H + E++RRDK+N + L L+P CN K+DK ++L A+ ++KTL+
Sbjct: 76 NAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 130
Score = 42 (19.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 185 PPIPGATAVPGIQMPGFP 202
P +P A VPG G+P
Sbjct: 550 PDLPSAGIVPGPDSIGYP 567
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 21/52 (40%), Positives = 38/52 (73%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +A+ Y+ L ++ +M
Sbjct: 434 HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVM 485
>TAIR|locus:2126856 [details] [associations]
symbol:IND "AT4G00120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010197 "polar nucleus fusion" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161471
GO:GO:0010197 EMBL:AF069299 EMBL:BT029443 EMBL:AF488578
IPI:IPI00532644 PIR:T01340 RefSeq:NP_191923.1 UniGene:At.34598
ProteinModelPortal:O81313 SMR:O81313 IntAct:O81313 STRING:O81313
PRIDE:O81313 EnsemblPlants:AT4G00120.1 GeneID:827911
KEGG:ath:AT4G00120 TAIR:At4g00120 eggNOG:NOG274244
HOGENOM:HOG000113070 InParanoid:O81313 OMA:DWNKAND PhylomeDB:O81313
ProtClustDB:CLSN2916160 Genevestigator:O81313 Uniprot:O81313
Length = 198
Score = 113 (44.8 bits), Expect = 0.00012, P = 0.00012
Identities = 23/56 (41%), Positives = 39/56 (69%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMP 136
R+RR++I++K+R L+ ++P K+D ASML+EAI Y K L+ QV ++ + + P
Sbjct: 128 RRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQPHSQIGAP 183
>UNIPROTKB|Q6Z1F9 [details] [associations]
symbol:OSJNBa0033D24.39 "BHLH transcription factor-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 GO:GO:0005634
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005439
EMBL:AP004464 RefSeq:NP_001062365.1 UniGene:Os.89290 GeneID:4346166
KEGG:osa:4346166 Uniprot:Q6Z1F9
Length = 143
Score = 97 (39.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 91 MRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSM 129
MR LQ L+P C+KV KA +L+E I+Y+++LQ QV +SM
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSM 40
Score = 37 (18.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 20/81 (24%), Positives = 32/81 (39%)
Query: 178 NPAQFLMPPIPGATAVP---GIQMPGFPGQPLPMSMLRTPLGLMHKTNPVAGVSRAAASM 234
N +FL I + V G+ G Q + M + L + NPV S A S
Sbjct: 33 NQVEFLSMRIASMSPVLYGFGMDSDGLHDQKIG-GMFQEALAM---PNPVLNQSSPAPSQ 88
Query: 235 EVKDSAPLTNPGDSNQNVEIN 255
+ D+ T+ +Q+ I+
Sbjct: 89 AIMDTTSTTSYSLQSQHGAIS 109
>TAIR|locus:2026037 [details] [associations]
symbol:FBH3 "AT1G51140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048573 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC079828 EMBL:AY034941 EMBL:AY063120
IPI:IPI00519239 PIR:H96548 RefSeq:NP_564583.1 UniGene:At.19155
ProteinModelPortal:Q9C690 SMR:Q9C690 PaxDb:Q9C690 PRIDE:Q9C690
EnsemblPlants:AT1G51140.1 GeneID:841537 KEGG:ath:AT1G51140
TAIR:At1g51140 eggNOG:NOG312535 HOGENOM:HOG000242890
InParanoid:Q9C690 OMA:TKDEDSA PhylomeDB:Q9C690
ProtClustDB:CLSN2917227 Genevestigator:Q9C690 Uniprot:Q9C690
Length = 379
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 29/70 (41%), Positives = 41/70 (58%)
Query: 68 RKKRTPEVHKRY--ERKRRDKINKKMRALQELIPNCN-KVDKASMLEEAIDYLKTLQFQV 124
R KR H R ER RR KI+++MR LQ+L+PN + + + A ML+ A+ Y+K LQ QV
Sbjct: 305 RAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQV 364
Query: 125 MMMSMGTGVC 134
+ C
Sbjct: 365 KALEESRARC 374
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 116 (45.9 bits), Expect = 0.00013, P = 0.00013
Identities = 19/41 (46%), Positives = 35/41 (85%)
Query: 80 ERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
ER RR K+N+++ AL+ ++PN +K+DKAS+++++IDY++ L
Sbjct: 59 ERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQEL 99
>UNIPROTKB|Q7XT55 [details] [associations]
symbol:OSJNBa0084K20.3 "OSJNBa0076N16.1 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000141 EMBL:AL606613 EMBL:AL731617 Uniprot:Q7XT55
Length = 218
Score = 114 (45.2 bits), Expect = 0.00013, P = 0.00013
Identities = 28/70 (40%), Positives = 41/70 (58%)
Query: 68 RKKRTPEVHKRY--ERKRRDKINKKMRALQELIPNCNKVDKAS-MLEEAIDYLKTLQFQV 124
R KR H R ER+RR +I++K+R LQ L+PN +K S ML+ A+D++K LQ Q+
Sbjct: 135 RAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQL 194
Query: 125 MMMSMGTGVC 134
+ C
Sbjct: 195 QTLKEDKEKC 204
>UNIPROTKB|Q657D1 [details] [associations]
symbol:P0697C12.40 "BHLH transcription-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003141
EMBL:AP003296 Uniprot:Q657D1
Length = 484
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 40/132 (30%), Positives = 65/132 (49%)
Query: 3 AGKCIEPPVPSSSLCSLGASNNNPACNTFNL---KRRYE-DTEGSACPCDQYEKKLERKA 58
A K +P + SSS S+ P N YE DTE A + + +
Sbjct: 293 ASKRAKPSLSSSS-SSISFDGRGPGGNCGGGGGDDPLYEPDTEALAQVKEMIYRAAAMRP 351
Query: 59 VTVRGSKSNRKKRTPEVHKRYE------RKRRDKINKKMRALQELIPNCNKVDKASMLEE 112
VT+ + + R V + R+RR++I++++R LQ+L+P K+D ASML+E
Sbjct: 352 VTLGAEDAGERPRRRNVRISSDPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDE 411
Query: 113 AIDYLKTLQFQV 124
A +YL+ L+ Q+
Sbjct: 412 AANYLRFLKSQI 423
>TAIR|locus:2045263 [details] [associations]
symbol:AT2G31730 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009723 "response to
ethylene stimulus" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 EMBL:CP002685 GO:GO:0003700
GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240890 OMA:SKGLCLV EMBL:AJ576041 IPI:IPI00539360
RefSeq:NP_180732.3 UniGene:At.38180 ProteinModelPortal:Q7XJU1
SMR:Q7XJU1 DNASU:817730 EnsemblPlants:AT2G31730.1 GeneID:817730
KEGG:ath:AT2G31730 TAIR:At2g31730 InParanoid:Q7XJU1
PhylomeDB:Q7XJU1 ProtClustDB:CLSN2687695 Genevestigator:Q7XJU1
Uniprot:Q7XJU1
Length = 153
Score = 106 (42.4 bits), Expect = 0.00014, P = 0.00014
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 48 DQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERK-RRDKINKKMRALQELIPNCNKVDK 106
D E +E K V + N+ KR + K R+DK+ +++ ALQ+L+ K D
Sbjct: 6 DSAEMMMETKR-NVYSLEDNKIKRHKSSDLSFSSKERKDKLAERISALQQLVSPYGKTDT 64
Query: 107 ASMLEEAIDYLKTLQFQVMMMS 128
AS+L E + Y++ LQ QV ++S
Sbjct: 65 ASVLLEGMQYIQFLQEQVKVLS 86
>TAIR|locus:504956068 [details] [associations]
symbol:AT2G31215 "AT2G31215" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002685 GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00519006 RefSeq:NP_850161.1 UniGene:At.52991
ProteinModelPortal:F4IQQ9 SMR:F4IQQ9 EnsemblPlants:AT2G31215.1
GeneID:817678 KEGG:ath:AT2G31215 PhylomeDB:F4IQQ9 Uniprot:F4IQQ9
Length = 129
Score = 97 (39.2 bits), Expect = 0.00016, P = 0.00016
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 48 DQYEKKLER-KAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDK 106
++Y KK ER KA +GSK +R T ER+RR N + L+ LIPN K +
Sbjct: 2 ERYTKKNERFKAEEGKGSKKSRTFLT-------ERERRALFNDRFFDLKNLIPNPTKGGE 54
Query: 107 ASMLEEAIDYLKTLQ 121
AS++++ I Y+ LQ
Sbjct: 55 ASIVQDGIVYINELQ 69
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 65 KSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQV 124
+S KR + ERKRR K+N + L+ L+PN K+D+AS+L +AIDY+ LQ QV
Sbjct: 275 RSGGAKRQQCKNLEAERKRRKKLNGHLYKLRSLVPNITKMDRASILGDAIDYIVGLQKQV 334
>UNIPROTKB|Q6ZJC8 [details] [associations]
symbol:OJ1666_A04.16 "Os08g0477900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003917 RefSeq:NP_001062047.1 UniGene:Os.73988
EnsemblPlants:LOC_Os08g37290.1 GeneID:4345836 KEGG:osa:4345836
OMA:LLNRDEH ProtClustDB:CLSN2697408 Uniprot:Q6ZJC8
Length = 223
Score = 113 (44.8 bits), Expect = 0.00018, P = 0.00018
Identities = 24/71 (33%), Positives = 43/71 (60%)
Query: 68 RKKRTPEV--HKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVM 125
RK +P V H ERKRR +IN + L+ L+P+ +++DKA++L E + +++ L+ +
Sbjct: 13 RKGGSPAVRSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCRAD 72
Query: 126 MMSMGTGVCMP 136
+ G V +P
Sbjct: 73 DATEGADVVVP 83
>UNIPROTKB|Q69IU0 [details] [associations]
symbol:P0498F03.15 "Putative MYC-related DNA binding
protein RD22BP1" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP006525 EMBL:AP007254
RefSeq:NP_001063693.1 UniGene:Os.86289
EnsemblPlants:LOC_Os09g34330.1 GeneID:4347601 KEGG:osa:4347601
OMA:GPTVSHV ProtClustDB:CLSN2725166 Uniprot:Q69IU0
Length = 284
Score = 115 (45.5 bits), Expect = 0.00021, P = 0.00021
Identities = 28/87 (32%), Positives = 48/87 (55%)
Query: 39 DTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEV-HKRYERKRRDKINKKMRALQEL 97
D+E S P +E ++ RG K + P V H ER+RR+K+N++ L+
Sbjct: 75 DSELSELP-RSFEAAAAQRPAKRRGRKPGPRPDGPTVSHVEAERQRREKLNRRFCDLRAA 133
Query: 98 IPNCNKVDKASMLEEAIDYLKTLQFQV 124
+P +++DKAS+L +A Y+ L+ +V
Sbjct: 134 VPTVSRMDKASLLADAAAYIAELRARV 160
>UNIPROTKB|Q8S0C6 [details] [associations]
symbol:B1112D09.6 "Uncharacterized protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000138
HSSP:P01106 EMBL:AP003432 EMBL:AK106333
EnsemblPlants:LOC_Os01g39330.1 eggNOG:NOG273636 OMA:LNDSFHT
Uniprot:Q8S0C6
Length = 454
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 29/90 (32%), Positives = 45/90 (50%)
Query: 42 GSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNC 101
G A P DQ R + ++ + H ERKRR+K+N L+ L+P C
Sbjct: 233 GLAVPMDQKPGGGGRGRQQEEAAAASATNSSQLYHMMSERKRREKLNDSFHTLRSLLPPC 292
Query: 102 NKVDKASMLEEAIDYLKTLQFQVMMMSMGT 131
+K DK ++L A YLK+L+ ++ + GT
Sbjct: 293 SKKDKTTVLINAAKYLKSLETEITELE-GT 321
>TAIR|locus:2076581 [details] [associations]
symbol:AT3G57800 "AT3G57800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL049660 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000037005 ProtClustDB:CLSN2680198
EMBL:AF488593 EMBL:AL132977 EMBL:AY139773 EMBL:BT003037
EMBL:AY085849 IPI:IPI00532305 IPI:IPI00535946 PIR:T46002
RefSeq:NP_567057.2 RefSeq:NP_850745.1 UniGene:At.34797
ProteinModelPortal:Q3EAI1 EnsemblPlants:AT3G57800.1 GeneID:825530
KEGG:ath:AT3G57800 TAIR:At3g57800 eggNOG:NOG254513
InParanoid:Q3EAI1 OMA:MVASANL PhylomeDB:Q3EAI1
Genevestigator:Q3EAI1 Uniprot:Q3EAI1
Length = 426
Score = 104 (41.7 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 37/108 (34%), Positives = 51/108 (47%)
Query: 1 LDAGKCIEPPVPSSS--LCSLGASNNNPAC---NTFNLKRRYEDTEGSACPCDQYEKKLE 55
LD K EP SS L S A N C N N KR+ + +G + +
Sbjct: 138 LDRVKT-EPAETDSSQRLISDSAIENQIPCPNQNNRNGKRKDFEKKGKSSTKKNKSSEEN 196
Query: 56 RKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK 103
K V ++ R + T + H ER RR+KIN +M+ LQEL+P C+K
Sbjct: 197 EKLPYVH-VRARRGQAT-DSHSLAERARREKINARMKLLQELVPGCDK 242
Score = 53 (23.7 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 107 ASMLEEAIDYLKTLQFQVMMMSMGTGVCMP 136
A +L+E I+++++LQ QV M+SM P
Sbjct: 294 ALVLDEIINHVQSLQRQVEMLSMRLAAVNP 323
>UNIPROTKB|Q6ESL3 [details] [associations]
symbol:OJ1294_G06.8 "DNA binding protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005093 ProteinModelPortal:Q6ESL3
EnsemblPlants:LOC_Os09g24490.1 KEGG:dosa:Os09t0410700-00
Gramene:Q6ESL3 OMA:RRHECIA Uniprot:Q6ESL3
Length = 363
Score = 116 (45.9 bits), Expect = 0.00025, P = 0.00025
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 59 VTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLK 118
VT R + H ER+RR +IN + L+ L+PN K DKAS+L E I+++K
Sbjct: 93 VTAREIMDAKALAASRSHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVK 152
Query: 119 TLQFQ 123
L+ Q
Sbjct: 153 ELKRQ 157
>UNIPROTKB|Q9DG35 [details] [associations]
symbol:BMAL1 "BHLH-PAS transcription factor BMAL1"
species:9031 "Gallus gallus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000060 "protein import into nucleus, translocation"
evidence=IEA] [GO:0000982 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0017162
"aryl hydrocarbon receptor binding" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA] [GO:0043425
"bHLH transcription factor binding" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0051879
"Hsp90 protein binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 GO:GO:0005737
GO:GO:0003677 GO:GO:0007623 GO:GO:0005667 GO:GO:0000060
GO:GO:0004871 GO:GO:0000982 TIGRFAMs:TIGR00229 GO:GO:0001190
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0042176 HOVERGEN:HBG000164 UniGene:Gga.1329 EMBL:AADN02030623
EMBL:AF193070 IPI:IPI00679553 STRING:Q9DG35
Ensembl:ENSGALT00000008634 HOGENOM:HOG000199297 InParanoid:Q9DG35
Uniprot:Q9DG35
Length = 127
Score = 95 (38.5 bits), Expect = 0.00026, P = 0.00026
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 80 ERKRRDKINKKMRALQELIPNCN----KVDKASMLEEAIDYLKTLQ 121
E++RRDK+N + L L+P CN K+DK ++L A+ ++KTL+
Sbjct: 2 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 47
>UNIPROTKB|Q5R4T2 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9601 "Pongo abelii"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956 CTD:406
HOVERGEN:HBG107503 KO:K02296 EMBL:CR861161 RefSeq:NP_001126900.1
UniGene:Pab.3880 ProteinModelPortal:Q5R4T2 GeneID:100173916
KEGG:pon:100173916 Uniprot:Q5R4T2
Length = 625
Score = 113 (44.8 bits), Expect = 0.00027, Sum P(2) = 0.00026
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCN----KVDKASMLEEAIDYLKTLQ 121
R K E H + E++RRDK+N + L L+P CN K+DK ++L A+ ++KTL+
Sbjct: 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
Score = 47 (21.6 bits), Expect = 0.00027, Sum P(2) = 0.00026
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 139 MLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRM 171
MLP+G G ++ H P + G G GRM
Sbjct: 465 MLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRM 497
>UNIPROTKB|E1BLF5 [details] [associations]
symbol:ARNTL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IEA]
[GO:0017162 "aryl hydrocarbon receptor binding" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000060
"protein import into nucleus, translocation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0007623 GO:GO:0005667 GO:GO:0000060 GO:GO:0004871
GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001190
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0042176 CTD:406 KO:K02296 OMA:EKINTNC EMBL:DAAA02040648
IPI:IPI00712443 RefSeq:NP_001178099.1 UniGene:Bt.39079 PRIDE:E1BLF5
Ensembl:ENSBTAT00000017323 GeneID:530705 KEGG:bta:530705
NextBio:20875311 Uniprot:E1BLF5
Length = 626
Score = 113 (44.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCN----KVDKASMLEEAIDYLKTLQ 121
R K E H + E++RRDK+N + L L+P CN K+DK ++L A+ ++KTL+
Sbjct: 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
Score = 47 (21.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 139 MLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRM 171
MLP+G G ++ H P + G G GRM
Sbjct: 466 MLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRM 498
>UNIPROTKB|O00327 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] [GO:0001190 "RNA polymerase II
transcription factor binding transcription factor activity involved
in positive regulation of transcription" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0043425 "bHLH transcription
factor binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0032922 "circadian regulation of
gene expression" evidence=ISS] [GO:0003677 "DNA binding"
evidence=IGI] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IDA] [GO:0017162
"aryl hydrocarbon receptor binding" evidence=IPI] [GO:0051879
"Hsp90 protein binding" evidence=IDA] [GO:0000982 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
EMBL:CH471064 GO:GO:0003677 GO:GO:0045944 GO:GO:0005667
GO:GO:0000060 GO:GO:0004871 GO:GO:0000982 GO:GO:0032922
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001190 eggNOG:NOG293303
HOGENOM:HOG000234379 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0051879 GO:GO:0042176 Pathway_Interaction_DB:circadianpathway
Reactome:REACT_24941 CTD:406 HOVERGEN:HBG107503 KO:K02296
OMA:EKINTNC OrthoDB:EOG4NS3B2 EMBL:D89722 EMBL:AB000812
EMBL:AB000813 EMBL:AB000814 EMBL:AB000815 EMBL:AB000816 EMBL:U51627
EMBL:U60415 EMBL:AF044288 EMBL:AK095749 EMBL:AK291510 EMBL:EF015894
EMBL:AC016884 EMBL:AC022878 EMBL:BC016674 EMBL:BC031214
EMBL:BC041129 IPI:IPI00217732 IPI:IPI00217734 IPI:IPI00217735
IPI:IPI00217736 IPI:IPI00412162 IPI:IPI00413132 IPI:IPI00783543
IPI:IPI00879656 IPI:IPI00910251 PIR:JC5405 PIR:JC5407 PIR:PC4288
PIR:PC4289 RefSeq:NP_001025443.1 RefSeq:NP_001025444.1
RefSeq:NP_001169.3 UniGene:Hs.65734 PDB:4H10 PDBsum:4H10
ProteinModelPortal:O00327 SMR:O00327 IntAct:O00327 STRING:O00327
PhosphoSite:O00327 PaxDb:O00327 PRIDE:O00327 DNASU:406
Ensembl:ENST00000361003 Ensembl:ENST00000389707
Ensembl:ENST00000396441 Ensembl:ENST00000401424
Ensembl:ENST00000403290 Ensembl:ENST00000403482
Ensembl:ENST00000403510 GeneID:406 KEGG:hsa:406 UCSC:uc001mkp.3
UCSC:uc001mkr.3 UCSC:uc001mks.3 UCSC:uc001mkx.3 UCSC:uc009ygm.1
GeneCards:GC11P013299 HGNC:HGNC:701 MIM:602550 neXtProt:NX_O00327
PharmGKB:PA24996 InParanoid:O00327 GenomeRNAi:406 NextBio:1701
ArrayExpress:O00327 Bgee:O00327 Genevestigator:O00327
GermOnline:ENSG00000133794 Uniprot:O00327
Length = 626
Score = 113 (44.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCN----KVDKASMLEEAIDYLKTLQ 121
R K E H + E++RRDK+N + L L+P CN K+DK ++L A+ ++KTL+
Sbjct: 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
Score = 47 (21.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 139 MLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRM 171
MLP+G G ++ H P + G G GRM
Sbjct: 466 MLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRM 498
>UNIPROTKB|A0MLS5 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9796 "Equus caballus"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229
eggNOG:NOG293303 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 CTD:406 HOVERGEN:HBG107503 KO:K02296
OrthoDB:EOG4NS3B2 EMBL:DQ988038 RefSeq:NP_001075390.1
UniGene:Eca.2805 ProteinModelPortal:A0MLS5 STRING:A0MLS5
GeneID:100034115 KEGG:ecb:100034115 InParanoid:A0MLS5
Uniprot:A0MLS5
Length = 626
Score = 113 (44.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCN----KVDKASMLEEAIDYLKTLQ 121
R K E H + E++RRDK+N + L L+P CN K+DK ++L A+ ++KTL+
Sbjct: 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
Score = 47 (21.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 139 MLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRM 171
MLP+G G ++ H P + G G GRM
Sbjct: 466 MLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRM 498
>UNIPROTKB|O88529 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:10036 "Mesocricetus auratus"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOVERGEN:HBG107503 EMBL:AF070917
ProteinModelPortal:O88529 IntAct:O88529 Uniprot:O88529
Length = 626
Score = 113 (44.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCN----KVDKASMLEEAIDYLKTLQ 121
R K E H + E++RRDK+N + L L+P CN K+DK ++L A+ ++KTL+
Sbjct: 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
Score = 47 (21.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 139 MLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRM 171
MLP+G G ++ H P + G G GRM
Sbjct: 466 MLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRM 498
>UNIPROTKB|Q91YA9 [details] [associations]
symbol:Arntl "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:1026970 "Nannospalax galili"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 EMBL:AJ318060 GO:GO:0005737
GO:GO:0006355 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 GO:GO:0032922 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
HOVERGEN:HBG107503 ProteinModelPortal:Q91YA9 Uniprot:Q91YA9
Length = 626
Score = 113 (44.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCN----KVDKASMLEEAIDYLKTLQ 121
R K E H + E++RRDK+N + L L+P CN K+DK ++L A+ ++KTL+
Sbjct: 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
Score = 47 (21.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 139 MLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRM 171
MLP+G G ++ H P + G G GRM
Sbjct: 466 MLPSGEGGPKKTHPTVPGIPGGTRAGAGKIGRM 498
>RGD|62003 [details] [associations]
symbol:Arntl "aryl hydrocarbon receptor nuclear translocator-like"
species:10116 "Rattus norvegicus" [GO:0000060 "protein import into
nucleus, translocation" evidence=ISO] [GO:0000982 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IEA;ISO;ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO;ISS] [GO:0007623 "circadian rhythm"
evidence=IEP;ISO] [GO:0016604 "nuclear body" evidence=ISO]
[GO:0017162 "aryl hydrocarbon receptor binding" evidence=ISO]
[GO:0032922 "circadian regulation of gene expression"
evidence=ISO;ISS] [GO:0042176 "regulation of protein catabolic
process" evidence=ISO] [GO:0042752 "regulation of circadian rhythm"
evidence=NAS] [GO:0043425 "bHLH transcription factor binding"
evidence=ISO] [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=ISO] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:62003 GO:GO:0005737
GO:GO:0006355 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0042752 GO:GO:0005667 GO:GO:0004871 GO:GO:0032922
SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 CTD:406 HOVERGEN:HBG107503 KO:K02296 EMBL:AB012600
EMBL:AF015953 EMBL:AF317669 EMBL:BC099833 IPI:IPI00339130
IPI:IPI00339131 IPI:IPI00339132 RefSeq:NP_077338.2 UniGene:Rn.14532
ProteinModelPortal:Q9EPW1 STRING:Q9EPW1 PhosphoSite:Q9EPW1
Ensembl:ENSRNOT00000019645 GeneID:29657 KEGG:rno:29657
UCSC:RGD:62003 NextBio:609947 ArrayExpress:Q9EPW1
Genevestigator:Q9EPW1 GermOnline:ENSRNOG00000014448 Uniprot:Q9EPW1
Length = 626
Score = 113 (44.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCN----KVDKASMLEEAIDYLKTLQ 121
R K E H + E++RRDK+N + L L+P CN K+DK ++L A+ ++KTL+
Sbjct: 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
Score = 47 (21.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 139 MLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRM 171
MLP+G G ++ H P + G G GRM
Sbjct: 466 MLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRM 498
>UNIPROTKB|Q9EPW1 [details] [associations]
symbol:Arntl "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:10116 "Rattus norvegicus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:62003
GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0042752 GO:GO:0005667 GO:GO:0004871
GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 CTD:406 HOVERGEN:HBG107503
KO:K02296 EMBL:AB012600 EMBL:AF015953 EMBL:AF317669 EMBL:BC099833
IPI:IPI00339130 IPI:IPI00339131 IPI:IPI00339132 RefSeq:NP_077338.2
UniGene:Rn.14532 ProteinModelPortal:Q9EPW1 STRING:Q9EPW1
PhosphoSite:Q9EPW1 Ensembl:ENSRNOT00000019645 GeneID:29657
KEGG:rno:29657 UCSC:RGD:62003 NextBio:609947 ArrayExpress:Q9EPW1
Genevestigator:Q9EPW1 GermOnline:ENSRNOG00000014448 Uniprot:Q9EPW1
Length = 626
Score = 113 (44.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCN----KVDKASMLEEAIDYLKTLQ 121
R K E H + E++RRDK+N + L L+P CN K+DK ++L A+ ++KTL+
Sbjct: 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
Score = 47 (21.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 139 MLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRM 171
MLP+G G ++ H P + G G GRM
Sbjct: 466 MLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRM 498
>UNIPROTKB|E2R130 [details] [associations]
symbol:ARNTL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AAEX03012928
Ensembl:ENSCAFT00000012969 Uniprot:E2R130
Length = 627
Score = 113 (44.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCN----KVDKASMLEEAIDYLKTLQ 121
R K E H + E++RRDK+N + L L+P CN K+DK ++L A+ ++KTL+
Sbjct: 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
Score = 47 (21.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 139 MLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRM 171
MLP+G G ++ H P + G G GRM
Sbjct: 466 MLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRM 498
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 116 (45.9 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
H ER+RR++IN + L+ ++PN K DKAS+L E I ++K L+ + ++S
Sbjct: 178 HSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSVIS 230
Score = 37 (18.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 10 PVPSSSLCSL-GASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKL 54
P PSSS S G+ N + L+ YE G+ + ++L
Sbjct: 89 PPPSSSPASFYGSFFNRSRAHHQGLQFGYEGFGGATSAAHHHHEQL 134
>MGI|MGI:1096381 [details] [associations]
symbol:Arntl "aryl hydrocarbon receptor nuclear
translocator-like" species:10090 "Mus musculus" [GO:0000060
"protein import into nucleus, translocation" evidence=IDA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IC]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=ISO;IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISA;IDA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISA;IDA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IDA;IMP] [GO:0008134 "transcription factor binding"
evidence=ISA] [GO:0016604 "nuclear body" evidence=IDA] [GO:0017162
"aryl hydrocarbon receptor binding" evidence=ISO] [GO:0032922
"circadian regulation of gene expression" evidence=IDA] [GO:0042176
"regulation of protein catabolic process" evidence=IDA] [GO:0043425
"bHLH transcription factor binding" evidence=IPI] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;IC;ISO;IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=ISO]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
MGI:MGI:1096381 GO:GO:0005829 GO:GO:0003677 GO:GO:0005667
GO:GO:0001077 GO:GO:0000060 GO:GO:0004871 GO:GO:0032922
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001190 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0008134 GO:GO:0042176
GO:GO:0016604 Reactome:REACT_109335 Reactome:REACT_24972 CTD:406
HOVERGEN:HBG107503 KO:K02296 OMA:EKINTNC OrthoDB:EOG4NS3B2
EMBL:AB012601 EMBL:AB015203 EMBL:AB012602 EMBL:AB014494
EMBL:BC025973 EMBL:BC011080 IPI:IPI00403502 IPI:IPI00462286
IPI:IPI00474434 IPI:IPI00474567 IPI:IPI00875930 PIR:JE0270
RefSeq:NP_001229977.1 RefSeq:NP_031515.1 UniGene:Mm.440371 PDB:4F3L
PDBsum:4F3L ProteinModelPortal:Q9WTL8 SMR:Q9WTL8 DIP:DIP-43977N
IntAct:Q9WTL8 MINT:MINT-1657344 STRING:Q9WTL8 PhosphoSite:Q9WTL8
PaxDb:Q9WTL8 PRIDE:Q9WTL8 Ensembl:ENSMUST00000047321 GeneID:11865
KEGG:mmu:11865 UCSC:uc009jhf.1 UCSC:uc009jhi.1 UCSC:uc009jhj.1
InParanoid:Q9WTL8 NextBio:279875 Bgee:Q9WTL8 Genevestigator:Q9WTL8
GermOnline:ENSMUSG00000055116 Uniprot:Q9WTL8
Length = 632
Score = 113 (44.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCN----KVDKASMLEEAIDYLKTLQ 121
R K E H + E++RRDK+N + L L+P CN K+DK ++L A+ ++KTL+
Sbjct: 76 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 133
Score = 47 (21.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 139 MLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRM 171
MLP+G G ++ H P + G G GRM
Sbjct: 472 MLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRM 504
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 117 (46.2 bits), Expect = 0.00029, P = 0.00029
Identities = 41/130 (31%), Positives = 67/130 (51%)
Query: 11 VPSSSLCSLGASNNN--PACNTFNLKRRYEDT-EGSACPCDQYE--KKLERKAVTVRGSK 65
V + + +LGA + + P+ ++F +R D+ E A P E +KL +KAV G+
Sbjct: 164 VDDAVVAALGAIDGSCRPSPSSFVAWKRTPDSDEVQAVPLISGEPPQKLLKKAVAGAGAW 223
Query: 66 SNRKKRTPEV-----------HKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAI 114
N + H ER+RR+K+ + L+ ++P+ +KVDKAS+L E I
Sbjct: 224 MNNADGSAATMTTDQGSSIKNHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETI 283
Query: 115 DYLKTLQFQV 124
YLK L+ +V
Sbjct: 284 AYLKELEKRV 293
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 113 (44.8 bits), Expect = 0.00029, P = 0.00029
Identities = 22/62 (35%), Positives = 39/62 (62%)
Query: 63 GSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQF 122
G +S P H ER+RR+K+N++ L+ +P +++DKAS+L +A+DY+ L+
Sbjct: 82 GPRSGGGGAPPIGHVEAERQRREKLNRRFCELRAAVPTVSRMDKASLLADAVDYIAELRR 141
Query: 123 QV 124
+V
Sbjct: 142 RV 143
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 115 (45.5 bits), Expect = 0.00029, P = 0.00029
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 80 ERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMM 139
ER+RR+KIN++ L +IP K+DKA++L +A+ Y+K LQ +V + G P+ M
Sbjct: 172 ERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLEEEDGGGRPAAM 231
Query: 140 L 140
+
Sbjct: 232 V 232
>UNIPROTKB|J9NTT7 [details] [associations]
symbol:ARNTL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:EKINTNC EMBL:AAEX03012928
Ensembl:ENSCAFT00000044767 Uniprot:J9NTT7
Length = 659
Score = 113 (44.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCN----KVDKASMLEEAIDYLKTLQ 121
R K E H + E++RRDK+N + L L+P CN K+DK ++L A+ ++KTL+
Sbjct: 101 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 158
Score = 47 (21.6 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 139 MLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRM 171
MLP+G G ++ H P + G G GRM
Sbjct: 498 MLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRM 530
>TAIR|locus:2085964 [details] [associations]
symbol:BHLH32 "AT3G25710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0016036 "cellular response to phosphate
starvation" evidence=IMP] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0048364 "root development" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB028607
GO:GO:0003677 GO:GO:0009718 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0016036
HOGENOM:HOG000243133 ProtClustDB:CLSN2689090 EMBL:DQ205679
EMBL:AY058840 EMBL:AY079033 EMBL:AY086383 EMBL:AF488571
IPI:IPI00523379 RefSeq:NP_189199.1 UniGene:At.22148
ProteinModelPortal:Q9LS08 SMR:Q9LS08 IntAct:Q9LS08 STRING:Q9LS08
PRIDE:Q9LS08 EnsemblPlants:AT3G25710.1 GeneID:822159
KEGG:ath:AT3G25710 TAIR:At3g25710 eggNOG:NOG304577 OMA:RERINTH
PhylomeDB:Q9LS08 Genevestigator:Q9LS08 GO:GO:0080147 Uniprot:Q9LS08
Length = 344
Score = 115 (45.5 bits), Expect = 0.00030, P = 0.00030
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
H ER+RR++IN + L+ ++PN K DKAS+L E I ++K L+ Q ++
Sbjct: 136 HSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQIT 188
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 115 (45.5 bits), Expect = 0.00032, P = 0.00032
Identities = 30/86 (34%), Positives = 45/86 (52%)
Query: 36 RYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQ 95
RY S P Q ++ K GS S+ + H ERKRR+KIN++ L
Sbjct: 154 RYLPAAVSPSPSAQ-TRRASSKGNGGGGSGSSSAAPYAQEHIIAERKRREKINQRFIELS 212
Query: 96 ELIPNCNKVDKASMLEEAIDYLKTLQ 121
+IP K+DKA++L +A+ Y+K +Q
Sbjct: 213 TVIPGLKKMDKATILSDAVRYVKEMQ 238
>UNIPROTKB|F1S6X1 [details] [associations]
symbol:LOC100738978 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CU914667
Ensembl:ENSSSCT00000014635 OMA:KKXILNG Uniprot:F1S6X1
Length = 273
Score = 113 (44.8 bits), Expect = 0.00032, P = 0.00032
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCN----KVDKASMLEEAIDYLKTLQ 121
R K E H + E++RRDK+N + L L+P CN K+DK ++L A+ ++KTL+
Sbjct: 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
>UNIPROTKB|Q5TKP7 [details] [associations]
symbol:OJ1362_G11.11 "Putative uncharacterized protein
OJ1362_G11.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC104713 ProteinModelPortal:Q5TKP7
EnsemblPlants:LOC_Os05g46370.1 KEGG:dosa:Os05t0541400-00
Gramene:Q5TKP7 HOGENOM:HOG000238211 Uniprot:Q5TKP7
Length = 416
Score = 116 (45.9 bits), Expect = 0.00032, P = 0.00032
Identities = 29/91 (31%), Positives = 52/91 (57%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM-SMGTGVCMPSMM 139
R RR+++++++R LQ L+P +K+D A+ML+EA YLK L+ Q+ + ++G G +++
Sbjct: 313 RLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALETLGNGNGNGNLL 372
Query: 140 LPTGIIGMQQMHAVAPQ-MSHFPPMGIGMDG 169
G + A A S+ + G DG
Sbjct: 373 HHGYYTGSRNATATAATGSSNSTVLAFGRDG 403
>UNIPROTKB|Q2QMM8 [details] [associations]
symbol:LOC_Os12g40630 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 Gramene:Q2QMM8
eggNOG:NOG272270 Uniprot:Q2QMM8
Length = 249
Score = 112 (44.5 bits), Expect = 0.00034, P = 0.00034
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 82 KRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMG 130
KRR KIN+ ++ LQ+L+P C+K + +AS L++ I Y+K+LQ MS+G
Sbjct: 107 KRRCKINENLKTLQQLVPVCDKSNNQASTLDKTIRYMKSLQQHAQAMSVG 156
>TAIR|locus:2020003 [details] [associations]
symbol:AT1G10610 "AT1G10610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC009398 Gene3D:4.10.280.10
SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215 EMBL:AC007067
HOGENOM:HOG000033929 EMBL:AK229375 EMBL:AF488620 IPI:IPI00786098
PIR:F86239 RefSeq:NP_172531.2 UniGene:At.42172
ProteinModelPortal:Q0WNR2 SMR:Q0WNR2 EnsemblPlants:AT1G10610.1
GeneID:837604 KEGG:ath:AT1G10610 TAIR:At1g10610 eggNOG:NOG318339
OMA:GIHGEVV PhylomeDB:Q0WNR2 ProtClustDB:CLSN2920225
Genevestigator:Q0WNR2 Uniprot:Q0WNR2
Length = 441
Score = 116 (45.9 bits), Expect = 0.00035, P = 0.00035
Identities = 34/112 (30%), Positives = 54/112 (48%)
Query: 20 GASN-NNPACNTFNLKRRY------EDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRT 72
G+S+ +NP+ T NL Y E PC K+ + SK+N+K
Sbjct: 198 GSSSVSNPSSETQNLFGNYPNASCVEILREEQTPCLIMNKEKDVVVQNANDSKANKKLLP 257
Query: 73 PEVHK----RYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
E K ERKRR++IN+ M L+ ++P K++K + +A+DY+ L
Sbjct: 258 TENFKSKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINEL 309
>ZFIN|ZDB-GENE-030408-1 [details] [associations]
symbol:arntl1b "aryl hydrocarbon receptor nuclear
translocator-like 1b" species:7955 "Danio rerio" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA;IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0009648 "photoperiodism" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-030408-1
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0009648 EMBL:CR318647 IPI:IPI00859492
Ensembl:ENSDART00000098259 OMA:REKINTH Uniprot:E7F4H0
Length = 646
Score = 118 (46.6 bits), Expect = 0.00036, P = 0.00036
Identities = 24/64 (37%), Positives = 42/64 (65%)
Query: 63 GSKSNRK-KRTPEVHKRYERKRRDKINKKMRALQELIPNCN----KVDKASMLEEAIDYL 117
GS+++++ K E H + E++RRDK+N + L L+P CN K+DK ++L A+ ++
Sbjct: 89 GSRADQQMKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 148
Query: 118 KTLQ 121
KTL+
Sbjct: 149 KTLR 152
>UNIPROTKB|Q6Z339 [details] [associations]
symbol:B1121A12.20 "Os02g0726700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
EMBL:AP008208 EMBL:AP005284 RefSeq:NP_001047993.1 UniGene:Os.52592
GeneID:4330593 KEGG:osa:4330593 ProtClustDB:CLSN2919237
Uniprot:Q6Z339
Length = 344
Score = 114 (45.2 bits), Expect = 0.00039, P = 0.00039
Identities = 26/63 (41%), Positives = 41/63 (65%)
Query: 64 SKSNRKKRTPEV-HKRYERKRRDKINKKMRALQELIPNCN-KVDKASMLEEAIDYLKTLQ 121
S +++ TP H E++RR KIN ++ L+EL+P+ + K DKAS L E I+Y++ LQ
Sbjct: 137 SSADQGPSTPRSKHSATEQRRRTKINDRLEILRELLPHTDQKRDKASFLSEVIEYIRFLQ 196
Query: 122 FQV 124
+V
Sbjct: 197 EKV 199
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 117 (46.2 bits), Expect = 0.00040, P = 0.00040
Identities = 32/99 (32%), Positives = 49/99 (49%)
Query: 23 NNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERK 82
N N ++ GS C DQ + + + K G S K E R+
Sbjct: 269 NEQQVVNDKDMNENGRVDSGSDCS-DQIDDEDDPKYKKKSGKGSQAKNLMAE------RR 321
Query: 83 RRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RR K+N ++ AL+ L+P K+D+AS+L +AI+Y+K LQ
Sbjct: 322 RRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQ 360
>UNIPROTKB|Q7X7U7 [details] [associations]
symbol:OSJNBb0091E11.4 "OJ990528_30.9 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008210
EMBL:CM000141 EMBL:AL606629 EMBL:AK059273 EMBL:AK101636
EMBL:AL662938 RefSeq:NP_001053182.1 UniGene:Os.55009
EnsemblPlants:LOC_Os04g41570.1 EnsemblPlants:LOC_Os04g41570.2
EnsemblPlants:LOC_Os04g41570.3 GeneID:4336261 KEGG:osa:4336261
eggNOG:NOG241248 OMA:SKGLCLV Uniprot:Q7X7U7
Length = 156
Score = 104 (41.7 bits), Expect = 0.00040, P = 0.00040
Identities = 24/68 (35%), Positives = 43/68 (63%)
Query: 63 GSKSNRKKR--TPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
GS +++K R +P ++++DKI +++ ALQ+L+ K D AS+L+EA Y+K L
Sbjct: 33 GSMTSKKPRNTSPRDAPVSPKEKKDKIGERVAALQQLVSPFGKTDTASVLQEASGYIKFL 92
Query: 121 QFQVMMMS 128
Q+ ++S
Sbjct: 93 HQQLEVLS 100
>ZFIN|ZDB-GENE-040824-6 [details] [associations]
symbol:helt "hey-like transcription factor"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003650
InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
PROSITE:PS51054 SMART:SM00353 ZFIN:ZDB-GENE-040824-6 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P07270 GeneTree:ENSGT00700000104168
EMBL:AY549496 EMBL:BC092667 IPI:IPI00483820 RefSeq:NP_996948.1
UniGene:Dr.91513 ProteinModelPortal:Q6QB00
Ensembl:ENSDART00000078889 GeneID:404275 KEGG:dre:404275 CTD:391723
eggNOG:NOG330980 HOGENOM:HOG000082510 HOVERGEN:HBG054492
InParanoid:Q6QB00 OMA:PVSHKVI OrthoDB:EOG46144W NextBio:20817636
Bgee:Q6QB00 Uniprot:Q6QB00
Length = 270
Score = 112 (44.5 bits), Expect = 0.00041, P = 0.00041
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 64 SKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIP------NCNKVDKASMLEEAIDYL 117
SK +K+TP HK E++RRD+IN+ + L + +P N K++KA +LE + YL
Sbjct: 52 SKMKDRKKTPVSHKVIEKRRRDRINRCLNELGKTVPMALAKQNSGKLEKAEILEMTVQYL 111
Query: 118 KTL 120
+ L
Sbjct: 112 RAL 114
>UNIPROTKB|Q69JI7 [details] [associations]
symbol:OSJNBa0026C08.39-1 "BHLH protein family-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008215 EMBL:CM000146 EMBL:EU837261 EMBL:AP006169
EMBL:AP005759 RefSeq:NP_001063459.1 UniGene:Os.16741
EnsemblPlants:LOC_Os09g29930.1 GeneID:4347359 KEGG:osa:4347359
OMA:HNIVTSA ProtClustDB:CLSN2697427 Uniprot:Q69JI7
Length = 504
Score = 116 (45.9 bits), Expect = 0.00043, P = 0.00043
Identities = 26/74 (35%), Positives = 48/74 (64%)
Query: 53 KLERKAVTVRGSKSNRKKRTPEV-HKRYERKRRDKINKKMRALQELIPNCN-KVDKASML 110
+++ K + GS ++++ +P H E++RR KIN + + L+EL+P+ + K DKA+ L
Sbjct: 198 RVDGKGGSCSGSGTDQRPSSPRSKHSATEQRRRSKINDRFQILRELLPHSDQKRDKATFL 257
Query: 111 EEAIDYLKTLQFQV 124
E I+Y++ LQ +V
Sbjct: 258 LEVIEYIRFLQEKV 271
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 113 (44.8 bits), Expect = 0.00044, P = 0.00044
Identities = 35/109 (32%), Positives = 55/109 (50%)
Query: 58 AVTVRGSKSNRKKRTPEVHKRY-ERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDY 116
+ T + RK +T ER+RR ++ K+ AL+ L+PN K+DKAS++ +A+ Y
Sbjct: 113 SATTTNNDGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLY 172
Query: 117 LKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGI 165
++ LQ Q + S+ TG G Q+ HA Q + P GI
Sbjct: 173 VQELQSQAKKLKSDIAGLEASLN-STG--GYQE-HAPDAQKTQ-PFRGI 216
>UNIPROTKB|B1AKB5 [details] [associations]
symbol:TFEB "Transcription factor EB" species:9606 "Homo
sapiens" [GO:0001892 "embryonic placenta development" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 InterPro:IPR021802 InterPro:IPR024097
InterPro:IPR024098 Pfam:PF00010 Pfam:PF11851 PROSITE:PS50888
SMART:SM00353 GO:GO:0045893 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0006959 PANTHER:PTHR10014 GO:GO:0001892 EMBL:AL365205
EMBL:AL035588 HOGENOM:HOG000231368 HOVERGEN:HBG006768
IPI:IPI00385436 UniGene:Hs.485360 HGNC:HGNC:11753 ChiTaRS:TFEB
PANTHER:PTHR10014:SF9 ProteinModelPortal:B1AKB5 SMR:B1AKB5
STRING:B1AKB5 Ensembl:ENST00000406563 ArrayExpress:B1AKB5
Bgee:B1AKB5 Uniprot:B1AKB5
Length = 334
Score = 113 (44.8 bits), Expect = 0.00048, P = 0.00048
Identities = 32/119 (26%), Positives = 57/119 (47%)
Query: 7 IEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKS 66
I P + + L +S+ N + + S+CP D +K+ E R
Sbjct: 32 INPEMQMPNTLPLSSSHLNVYSSDPQVTASLVGVTSSSCPADLTQKR-ELTDAESRALAK 90
Query: 67 NRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD----KASMLEEAIDYLKTLQ 121
R+K+ + H ER+RR IN +++ L LIP N +D K ++L+ ++DY++ +Q
Sbjct: 91 ERQKK--DNHNLIERRRRFNINDRIKELGMLIPKANDLDVRWNKGTILKASVDYIRRMQ 147
>ASPGD|ASPL0000066711 [details] [associations]
symbol:anbH1 species:162425 "Emericella nidulans"
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:BN001304 Gene3D:4.10.280.10
SUPFAM:SSF47459 EnsemblFungi:CADANIAT00000869 HOGENOM:HOG000174469
OMA:SFMDNSQ Uniprot:C8VDK0
Length = 292
Score = 112 (44.5 bits), Expect = 0.00049, P = 0.00049
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
HK ER+RR+ IN+ + + L+PNC+K +K ++L+ AI+Y+ L + MS
Sbjct: 173 HKEVERRRREAINEGINQIARLVPNCDK-NKGAILQRAIEYINQLHEEKRQMS 224
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 112 (44.5 bits), Expect = 0.00050, P = 0.00050
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 62 RGSKS---NRKKRTPEVHKRY---ERKRRDKINKKMRALQELIPNCNKVDKASMLEEAID 115
RG+K + R+P + K + ERKRR+K+++K AL L+P K DK ++L++AI
Sbjct: 100 RGTKRKTCSHGTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAIS 159
Query: 116 YLKTLQFQV 124
+K LQ Q+
Sbjct: 160 RMKQLQEQL 168
>UNIPROTKB|Q6ZBQ2 [details] [associations]
symbol:P0605H02.26 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 ProtClustDB:CLSN2697427 EMBL:HQ858865 EMBL:AP004620
EMBL:AK100183 RefSeq:NP_001062109.1 UniGene:Os.5093 STRING:Q6ZBQ2
EnsemblPlants:LOC_Os08g38210.1 GeneID:4345899 KEGG:osa:4345899
OMA:KPTHDFL Uniprot:Q6ZBQ2
Length = 508
Score = 115 (45.5 bits), Expect = 0.00057, P = 0.00057
Identities = 29/75 (38%), Positives = 46/75 (61%)
Query: 53 KLERKAVTVRGSK-SNRKKRTPEV-HKRYERKRRDKINKKMRALQELIP-NCNKVDKASM 109
++E K + GS +++ TP H E++RR KIN + + L++L+P N K DKAS
Sbjct: 201 RVEGKGGSCSGSAGTDQMPNTPRSKHSATEQRRRSKINDRFQLLRDLLPHNDQKRDKASF 260
Query: 110 LEEAIDYLKTLQFQV 124
L E I+Y++ LQ +V
Sbjct: 261 LLEVIEYIRFLQEKV 275
>UNIPROTKB|Q8LSP3 [details] [associations]
symbol:OJ1203D03.3 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC099732
EnsemblPlants:LOC_Os03g12760.1 KEGG:dosa:Os03t0229100-00
HOGENOM:HOG000239880 OMA:DSCLNIT Uniprot:Q8LSP3
Length = 451
Score = 114 (45.2 bits), Expect = 0.00062, P = 0.00061
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 68 RKKRTP---EVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQV 124
R+ R P + H ERKRR+K+ ++ AL ++P K DK S+L IDY+K L+ +V
Sbjct: 277 RRSRPPANAQEHVIAERKRREKLQQQFVALATIVPGLKKTDKISLLGSTIDYVKQLEEKV 336
Query: 125 MMMSMGT 131
+ G+
Sbjct: 337 KALEEGS 343
>UNIPROTKB|Q7F7Z2 [details] [associations]
symbol:Os01g0159800 "ESTs C26093(C11622)" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 OMA:QPETISD ProtClustDB:CLSN2691085 EMBL:AP002539
RefSeq:NP_001042087.1 UniGene:Os.1443
EnsemblPlants:LOC_Os01g06640.1 EnsemblPlants:LOC_Os01g06640.2
GeneID:4324065 KEGG:osa:4324065 Uniprot:Q7F7Z2
Length = 258
Score = 110 (43.8 bits), Expect = 0.00062, P = 0.00062
Identities = 21/60 (35%), Positives = 39/60 (65%)
Query: 63 GS-KSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
GS +S + R ++H ER+RR++IN + L+ +IP+ ++DKA++L +D +K L+
Sbjct: 55 GSGRSATEARALKIHSEAERRRRERINAHLTTLRRMIPDTKQMDKATLLARVVDQVKDLK 114
>MGI|MGI:103270 [details] [associations]
symbol:Tfeb "transcription factor EB" species:10090 "Mus
musculus" [GO:0001892 "embryonic placenta development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IDA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IMP] [GO:0007040 "lysosome organization"
evidence=ISO] [GO:0010508 "positive regulation of autophagy"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 InterPro:IPR021802
InterPro:IPR024097 InterPro:IPR024098 Pfam:PF00010 Pfam:PF11851
PROSITE:PS50888 SMART:SM00353 MGI:MGI:103270 GO:GO:0005737
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0044212 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0006959
PANTHER:PTHR10014 GO:GO:0001892 eggNOG:NOG251286
HOGENOM:HOG000231368 HOVERGEN:HBG006768
GeneTree:ENSGT00390000004402 CTD:7942 KO:K15590 OrthoDB:EOG469QTV
ChiTaRS:TFEB PANTHER:PTHR10014:SF9 EMBL:AF079095 IPI:IPI00314502
RefSeq:NP_001155194.1 RefSeq:NP_001155195.1 RefSeq:NP_035679.3
UniGene:Mm.2305 ProteinModelPortal:Q9R210 SMR:Q9R210 IntAct:Q9R210
STRING:Q9R210 PhosphoSite:Q9R210 PaxDb:Q9R210 PRIDE:Q9R210
Ensembl:ENSMUST00000086932 Ensembl:ENSMUST00000113288 GeneID:21425
KEGG:mmu:21425 InParanoid:Q9R210 NextBio:300746 Bgee:Q9R210
CleanEx:MM_TCFEB Genevestigator:Q9R210
GermOnline:ENSMUSG00000023990 Uniprot:Q9R210
Length = 475
Score = 114 (45.2 bits), Expect = 0.00066, P = 0.00066
Identities = 53/218 (24%), Positives = 92/218 (42%)
Query: 7 IEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKS 66
I P + + L +S+ N + S+CP D +K+ E R
Sbjct: 173 INPEMQMPNTLPLSSSHLNVYSGDPQVTASMVGVTSSSCPADLTQKR-ELTDAESRALAK 231
Query: 67 NRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD----KASMLEEAIDYLKTLQF 122
R+K+ + H ER+RR IN +++ L LIP N +D K ++L+ ++DY++ +Q
Sbjct: 232 ERQKK--DNHNLIERRRRFNINDRIKELGMLIPKANDLDVRWNKGTILKASVDYIRRMQK 289
Query: 123 QVM----MMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDG------RMQ 172
+ + + + M + L I ++ M A + P G+ M + +
Sbjct: 290 DLQKSRELENHSRRLEMTNKQLWLRIQELE-MQARVHGLPTTSPSGVNMAELAQQVVKQE 348
Query: 173 MGAGCNPAQFLM--PPIPGATAVPGIQMPGFPGQ-PLP 207
+ + P + LM P +P QMP P Q PLP
Sbjct: 349 LPSEDGPGEALMLGPEVPEPE-----QMPALPPQAPLP 381
>UNIPROTKB|Q5MP56 [details] [associations]
symbol:BA1 "Uncharacterized protein" species:4577 "Zea
mays" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY683001 EMBL:AY683002
EMBL:BT062649 RefSeq:NP_001105271.1 UniGene:Zm.18382 IntAct:Q5MP56
GeneID:542186 KEGG:zma:542186 HOGENOM:HOG000238432 OMA:MLEQAIH
Uniprot:Q5MP56
Length = 219
Score = 108 (43.1 bits), Expect = 0.00069, P = 0.00069
Identities = 25/71 (35%), Positives = 42/71 (59%)
Query: 61 VRGSKSNRKKR-----TPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAID 115
VRG S ++R + + R+RR +I+ + R L+ L+P +K+D SMLE+AI
Sbjct: 37 VRGGGSGARRRPGAKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIH 96
Query: 116 YLKTLQFQVMM 126
Y+K L+ Q+ +
Sbjct: 97 YVKFLKTQISL 107
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 111 (44.1 bits), Expect = 0.00073, P = 0.00073
Identities = 21/57 (36%), Positives = 38/57 (66%)
Query: 65 KSNRK-KRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
+SN+K + P + ER+RR ++N ++ L+ ++P K+D+ S+L +AIDY+K L
Sbjct: 140 RSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKEL 196
>WB|WBGene00001950 [details] [associations]
symbol:hlh-3 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0043068 "positive
regulation of programmed cell death" evidence=IGI;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0046662 "regulation of oviposition" evidence=IMP] [GO:0048841
"regulation of axon extension involved in axon guidance"
evidence=IMP] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0000977 "RNA polymerase II regulatory
region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR011598 InterPro:IPR015660 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 PANTHER:PTHR13935 GO:GO:0005634 GO:GO:0030182
GO:GO:0043565 GO:GO:0006366 GO:GO:0046662 Gene3D:4.10.280.10
SUPFAM:SSF47459 KO:K09067 GeneTree:ENSGT00530000063321
GO:GO:0043068 GO:GO:0048841 EMBL:Z68338 RefSeq:NP_495938.4
ProteinModelPortal:Q22717 SMR:Q22717 STRING:Q22717
EnsemblMetazoa:T24B8.6 GeneID:174447 KEGG:cel:CELE_T24B8.6
UCSC:T24B8.6 CTD:174447 WormBase:T24B8.6 InParanoid:Q22717
OMA:EITSQYY NextBio:884074 ArrayExpress:Q22717 Uniprot:Q22717
Length = 170
Score = 104 (41.7 bits), Expect = 0.00078, P = 0.00078
Identities = 29/78 (37%), Positives = 41/78 (52%)
Query: 64 SKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIP----NCNKVDKASMLEEAIDYLKT 119
SKS+ K+T + ERKR D++N+ LQE +P N K+ K L EA Y++
Sbjct: 19 SKSSVTKQTKQKRNERERKRVDQVNQGFVLLQERVPKAAGNKAKLSKVETLREAARYIQE 78
Query: 120 LQFQVMMMSMGTGVCMPS 137
LQ Q+ M S MP+
Sbjct: 79 LQKQLGMSSTSFHNSMPA 96
>TAIR|locus:2042486 [details] [associations]
symbol:AT2G31220 "AT2G31220" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT005711 EMBL:BT008608 EMBL:AK228592
EMBL:AF251695 IPI:IPI00521500 PIR:A84718 RefSeq:NP_180680.2
UniGene:At.28314 ProteinModelPortal:Q84TK1 SMR:Q84TK1
EnsemblPlants:AT2G31220.1 GeneID:817679 KEGG:ath:AT2G31220
TAIR:At2g31220 eggNOG:NOG254981 HOGENOM:HOG000083787
InParanoid:Q84TK1 OMA:NTKICEG PhylomeDB:Q84TK1
ProtClustDB:CLSN2716481 Genevestigator:Q84TK1 Uniprot:Q84TK1
Length = 458
Score = 113 (44.8 bits), Expect = 0.00081, P = 0.00081
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 59 VTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLK 118
VT +G + +RK RT ER+RR N + L+ LIPN K+D+AS++ EAIDY+K
Sbjct: 236 VTRKG-RGSRKSRTSPT----ERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIK 290
Query: 119 TL 120
L
Sbjct: 291 EL 292
>UNIPROTKB|Q69MD0 [details] [associations]
symbol:OSJNBb0019B14.23 "BHLH-like protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005755
ProteinModelPortal:Q69MD0 EnsemblPlants:LOC_Os09g28900.1
Gramene:Q69MD0 OMA:EMLGAEC Uniprot:Q69MD0
Length = 215
Score = 107 (42.7 bits), Expect = 0.00085, P = 0.00085
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
R R H ERKRR++IN + L+ L+P+ +++DKA++L E + Y++ L+
Sbjct: 24 RWTRARRSHSEAERKRRERINAHLDTLRGLVPSASRMDKAALLGEVVRYVRKLR 77
>UNIPROTKB|F1PC33 [details] [associations]
symbol:TFEB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006959 "humoral immune response"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] InterPro:IPR011598 InterPro:IPR021802
InterPro:IPR024097 InterPro:IPR024098 Pfam:PF00010 Pfam:PF11851
PROSITE:PS50888 SMART:SM00353 GO:GO:0045893 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0006959 PANTHER:PTHR10014 GO:GO:0001892
GeneTree:ENSGT00390000004402 CTD:7942 KO:K15590
PANTHER:PTHR10014:SF9 OMA:HGSPFPS EMBL:AAEX03008323
RefSeq:XP_851327.2 Ensembl:ENSCAFT00000002508 GeneID:609046
KEGG:cfa:609046 Uniprot:F1PC33
Length = 475
Score = 113 (44.8 bits), Expect = 0.00086, P = 0.00086
Identities = 55/229 (24%), Positives = 90/229 (39%)
Query: 7 IEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKS 66
I P + L +S+ N + S+CP D +K+ E R
Sbjct: 170 INPETQMPNTLPLSSSHLNVYSGDPQVTASLVGVTSSSCPADLTQKR-ELTDAESRALAK 228
Query: 67 NRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD----KASMLEEAIDYLKTLQF 122
R+K+ + H ER+RR IN +++ L LIP N +D K ++L+ ++DY++ +Q
Sbjct: 229 ERQKK--DNHNLIERRRRFNINDRIKELGMLIPKANDLDVRWNKGTILKASVDYIRRMQK 286
Query: 123 QVM----MMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQM----- 173
+ + S + M + L I ++ M A + P G+ M Q
Sbjct: 287 DLQKSRELESHSRRLEMTNKQLLLRIQELE-MQARVHGLPTTSPSGVNMAELAQQVVKQE 345
Query: 174 ---GAGCNPAQFLMPPIPGATAVPGIQMPGFPGQPLPMSMLRTPLGLMH 219
G A L P +P +P + P P PLP + P H
Sbjct: 346 LPSDEGPGEALLLEPEVPDPEPLPVVP-PQAP-LPLPAQPPQPPSPFHH 392
>UNIPROTKB|P19484 [details] [associations]
symbol:TFEB "Transcription factor EB" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0001892 "embryonic
placenta development" evidence=ISS] [GO:0006959 "humoral immune
response" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS;IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007040 "lysosome organization" evidence=IMP] [GO:0010508
"positive regulation of autophagy" evidence=IMP] InterPro:IPR011598
InterPro:IPR021802 InterPro:IPR024097 InterPro:IPR024098
Pfam:PF00010 Pfam:PF11851 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0005737 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0044212 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0006959 PANTHER:PTHR10014 GO:GO:0001892
EMBL:AL035588 eggNOG:NOG251286 HOGENOM:HOG000231368
HOVERGEN:HBG006768 EMBL:M33782 EMBL:AJ608786 EMBL:BC006225
EMBL:BC032448 IPI:IPI00385436 IPI:IPI00465427 PIR:A35658
RefSeq:NP_001161299.2 RefSeq:NP_001258872.1 RefSeq:NP_001258873.1
RefSeq:NP_001258874.1 RefSeq:NP_009093.1 UniGene:Hs.485360
ProteinModelPortal:P19484 SMR:P19484 IntAct:P19484 STRING:P19484
PhosphoSite:P19484 DMDM:19856774 PRIDE:P19484 DNASU:7942
Ensembl:ENST00000230323 Ensembl:ENST00000373033
Ensembl:ENST00000403298 Ensembl:ENST00000420312 GeneID:7942
KEGG:hsa:7942 UCSC:uc003oqr.1 UCSC:uc003oqs.1 CTD:7942
GeneCards:GC06M041651 HGNC:HGNC:11753 MIM:600744 neXtProt:NX_P19484
PharmGKB:PA36468 InParanoid:P19484 KO:K15590 OrthoDB:EOG469QTV
PhylomeDB:P19484 ChiTaRS:TFEB GenomeRNAi:7942 NextBio:30462
ArrayExpress:P19484 Bgee:P19484 CleanEx:HS_TFEB
Genevestigator:P19484 GermOnline:ENSG00000112561
PANTHER:PTHR10014:SF9 Uniprot:P19484
Length = 476
Score = 113 (44.8 bits), Expect = 0.00086, P = 0.00086
Identities = 32/119 (26%), Positives = 57/119 (47%)
Query: 7 IEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKS 66
I P + + L +S+ N + + S+CP D +K+ E R
Sbjct: 174 INPEMQMPNTLPLSSSHLNVYSSDPQVTASLVGVTSSSCPADLTQKR-ELTDAESRALAK 232
Query: 67 NRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD----KASMLEEAIDYLKTLQ 121
R+K+ + H ER+RR IN +++ L LIP N +D K ++L+ ++DY++ +Q
Sbjct: 233 ERQKK--DNHNLIERRRRFNINDRIKELGMLIPKANDLDVRWNKGTILKASVDYIRRMQ 289
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 110 (43.8 bits), Expect = 0.00087, P = 0.00087
Identities = 27/84 (32%), Positives = 45/84 (53%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS--MGTGV 133
H ERKRR+KIN++ L +IP K+DKA++L +A Y++ LQ ++ + V
Sbjct: 131 HVVAERKRREKINQRFMELSAVIPKLKKMDKATILSDAASYIRELQEKLKALEEQAAARV 190
Query: 134 CMPSMMLPTGIIGMQQMHAVAPQM 157
+M P+ M + V P++
Sbjct: 191 TEAAMATPSPARAMNHL-PVPPEI 213
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 111 (44.1 bits), Expect = 0.00089, P = 0.00089
Identities = 20/56 (35%), Positives = 37/56 (66%)
Query: 65 KSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
KS + + P + ER+RR ++N ++ L+ ++P +K+D+ S+L +AIDY+K L
Sbjct: 168 KSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKEL 223
>UNIPROTKB|B0QYS6 [details] [associations]
symbol:TFEB "Transcription factor EB" species:9606 "Homo
sapiens" [GO:0001892 "embryonic placenta development" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 InterPro:IPR021802 InterPro:IPR024097
InterPro:IPR024098 Pfam:PF00010 Pfam:PF11851 PROSITE:PS50888
SMART:SM00353 GO:GO:0045893 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0006959 PANTHER:PTHR10014 GO:GO:0001892 EMBL:AL365205
EMBL:AL035588 HOGENOM:HOG000231368 HOVERGEN:HBG006768
RefSeq:NP_001161299.2 UniGene:Hs.485360 GeneID:7942 HGNC:HGNC:11753
ChiTaRS:TFEB PANTHER:PTHR10014:SF9 IPI:IPI00893531
ProteinModelPortal:B0QYS6 SMR:B0QYS6 STRING:B0QYS6
Ensembl:ENST00000358871 ArrayExpress:B0QYS6 Bgee:B0QYS6
Uniprot:B0QYS6
Length = 490
Score = 113 (44.8 bits), Expect = 0.00090, P = 0.00090
Identities = 32/119 (26%), Positives = 57/119 (47%)
Query: 7 IEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKS 66
I P + + L +S+ N + + S+CP D +K+ E R
Sbjct: 188 INPEMQMPNTLPLSSSHLNVYSSDPQVTASLVGVTSSSCPADLTQKR-ELTDAESRALAK 246
Query: 67 NRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD----KASMLEEAIDYLKTLQ 121
R+K+ + H ER+RR IN +++ L LIP N +D K ++L+ ++DY++ +Q
Sbjct: 247 ERQKK--DNHNLIERRRRFNINDRIKELGMLIPKANDLDVRWNKGTILKASVDYIRRMQ 303
>UNIPROTKB|C9JBW0 [details] [associations]
symbol:KIAA2018 "Basic helix-loop-helix domain-containing
protein KIAA2018" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC055740 HGNC:HGNC:30494 ChiTaRS:KIAA2018
EMBL:AC108693 IPI:IPI00829891 ProteinModelPortal:C9JBW0 SMR:C9JBW0
Ensembl:ENST00000491165 HOGENOM:HOG000185801 ArrayExpress:C9JBW0
Bgee:C9JBW0 Uniprot:C9JBW0
Length = 88
Score = 90 (36.7 bits), Expect = 0.00094, P = 0.00094
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 64 SKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCN---KVDKASMLEEAIDYLKTL 120
+K +K+ E H ER R+ KIN + + ELIP C+ K K +L++A Y+ L
Sbjct: 11 TKKQHRKKNRETHNAVERHRKKKINAGINRIGELIP-CSPALKQSKNMILDQAFKYITEL 69
Query: 121 QFQ 123
+ Q
Sbjct: 70 KRQ 72
>UNIPROTKB|Q9I8T7 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9031 "Gallus gallus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] [GO:0000982 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0016604 "nuclear
body" evidence=IEA] [GO:0017162 "aryl hydrocarbon receptor binding"
evidence=IEA] [GO:0032922 "circadian regulation of gene expression"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0043425 "bHLH transcription factor binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0003677 GO:GO:0007623 GO:GO:0005667
GO:GO:0000060 GO:GO:0004871 GO:GO:0000982 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0001190 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956 GO:GO:0042176
EMBL:AF205219 EMBL:AF246957 IPI:IPI00577807 RefSeq:NP_001001463.1
UniGene:Gga.1329 ProteinModelPortal:Q9I8T7 STRING:Q9I8T7
Ensembl:ENSGALT00000032732 GeneID:374115 KEGG:gga:374115 CTD:406
HOVERGEN:HBG107503 InParanoid:Q9I8T7 KO:K02296 OMA:EKINTNC
OrthoDB:EOG4NS3B2 NextBio:20813631 ArrayExpress:Q9I8T7
Uniprot:Q9I8T7
Length = 633
Score = 114 (45.2 bits), Expect = 0.00099, P = 0.00099
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 65 KSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCN----KVDKASMLEEAIDYLKTL 120
+ R K E H + E++RRDK+N + L L+P CN K+DK ++L A+ ++KTL
Sbjct: 73 QQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 132
Query: 121 Q 121
+
Sbjct: 133 R 133
>UNIPROTKB|F8W6J9 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC016884
EMBL:AC022878 IPI:IPI00217732 HGNC:HGNC:701
ProteinModelPortal:F8W6J9 SMR:F8W6J9 Ensembl:ENST00000389708
ArrayExpress:F8W6J9 Bgee:F8W6J9 Uniprot:F8W6J9
Length = 526
Score = 113 (44.8 bits), Expect = 0.0010, P = 0.00099
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCN----KVDKASMLEEAIDYLKTLQ 121
R K E H + E++RRDK+N + L L+P CN K+DK ++L A+ ++KTL+
Sbjct: 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.131 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 268 268 0.00096 114 3 11 22 0.36 34
32 0.39 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 179
No. of states in DFA: 578 (61 KB)
Total size of DFA: 183 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.23u 0.16s 27.39t Elapsed: 00:00:01
Total cpu time: 27.24u 0.16s 27.40t Elapsed: 00:00:01
Start: Fri May 10 14:15:12 2013 End: Fri May 10 14:15:13 2013
WARNINGS ISSUED: 1