BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038097
(268 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 144/216 (66%), Gaps = 25/216 (11%)
Query: 2 DAGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTV 61
D GK I+ +SS+CS GASN+ T +L+R+YEDTEG+A D E E + V
Sbjct: 313 DRGKSIDQLTATSSICSRGASNDP----TSSLERQYEDTEGTAYSSDDLE---EEEQVPA 365
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RGS ++++R E+H ERKRRD+INKKMRALQ+LIPN NKVDKASML EAIDYLK+LQ
Sbjct: 366 RGSAGSKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKVDKASMLGEAIDYLKSLQ 425
Query: 122 FQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGR-MQMGAGCNPA 180
QV MMSMGT +CMP MMLPT GMQ +H AP ++ F PMG+GMD R MQMG GC+PA
Sbjct: 426 LQVQMMSMGTRLCMPLMMLPT---GMQHIH--APLLAQFSPMGVGMDTRLMQMGVGCSPA 480
Query: 181 QFLMPPIPGATAVPGIQMPGFP-GQPLPMSMLRTPL 215
F P M G P GQ LPMS+ + P
Sbjct: 481 TF-----------PASGMFGLPAGQMLPMSVSQAPF 505
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 144/216 (66%), Gaps = 25/216 (11%)
Query: 2 DAGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTV 61
D GK I+ +SS+CS GASN+ T +L+R+YEDTEG+A D E E + V
Sbjct: 319 DRGKSIDQLTATSSICSRGASNDP----TSSLERQYEDTEGTAYSSDDLE---EEEQVPA 371
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RGS ++++R E+H ERKRRD+INKKMRALQ+LIPN NKVDKASML EAIDYLK+LQ
Sbjct: 372 RGSAGSKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKVDKASMLGEAIDYLKSLQ 431
Query: 122 FQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGR-MQMGAGCNPA 180
QV MMSMGT +CMP MMLPT GMQ +H AP ++ F PMG+GMD R MQMG GC+PA
Sbjct: 432 LQVQMMSMGTRLCMPLMMLPT---GMQHIH--APLLAQFSPMGVGMDTRLMQMGVGCSPA 486
Query: 181 QFLMPPIPGATAVPGIQMPGFP-GQPLPMSMLRTPL 215
F P M G P GQ LPMS+ + P
Sbjct: 487 TF-----------PASGMFGLPAGQMLPMSVSQAPF 511
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/286 (44%), Positives = 160/286 (55%), Gaps = 43/286 (15%)
Query: 2 DAGKCIEPPVPSSSLCS---LGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLE--R 56
D K IEP V SS+CS + ++N+P NLKR+ DTE S CP + E++ R
Sbjct: 391 DGEKTIEPAVACSSVCSGNSVERASNDP---KHNLKRKCRDTEESECPSEDVEEESVGVR 447
Query: 57 KAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDY 116
K+ +G +++ R EVH ER+RRD+IN+KMRALQELIPNCNKVDKASML+EAI+Y
Sbjct: 448 KSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEY 507
Query: 117 LKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPP---------MGIGM 167
LKTLQ QV +MSMGTG+CMP MMLPT GMQ +HA M HFPP
Sbjct: 508 LKTLQLQVQIMSMGTGLCMPPMMLPT---GMQHIHAA--HMGHFPPMGVGMGMGMGMGYG 562
Query: 168 DGRMQMGAGCNPAQFLMPPIPGATAVPG----------------IQMPGFPGQPLPMSML 211
G + M G F+ P T PG +Q+ G PGQ +P+SM
Sbjct: 563 MGMLDMNGGSPSCPFIQAPPMQGTHFPGRPISVPPNLHGMVGSNLQVFGLPGQGIPLSMP 622
Query: 212 RTPLGLMH-----KTNPVAGVSRAAASMEVKDSAPLTNPGDSNQNV 252
PL M K++ S AA SMEV DSAP ++ D QNV
Sbjct: 623 HAPLIPMSGSPLMKSSMALNDSGAAGSMEVPDSAPASSSKDLIQNV 668
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 128/286 (44%), Positives = 160/286 (55%), Gaps = 43/286 (15%)
Query: 2 DAGKCIEPPVPSSSLCS---LGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLE--R 56
D K IEP V SS+CS + ++N+P NLKR+ DTE S CP + E++ R
Sbjct: 255 DGEKTIEPAVACSSVCSGNSVERASNDP---KHNLKRKCRDTEESECPSEDVEEESVGVR 311
Query: 57 KAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDY 116
K+ +G +++ R EVH ER+RRD+IN+KMRALQELIPNCNKVDKASML+EAI+Y
Sbjct: 312 KSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEY 371
Query: 117 LKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPP---------MGIGM 167
LKTLQ QV +MSMGTG+CMP MMLPT GMQ +HA M HFPP
Sbjct: 372 LKTLQLQVQIMSMGTGLCMPPMMLPT---GMQHIHAA--HMGHFPPMGVGMGMGMGMGYG 426
Query: 168 DGRMQMGAGCNPAQFLMPPIPGATAVPG----------------IQMPGFPGQPLPMSML 211
G + M G F+ P T PG +Q+ G PGQ +P+SM
Sbjct: 427 MGMLDMNGGSPSCPFIQAPPMQGTHFPGRPISVPPNLHGMVGSNLQVFGLPGQGIPLSMP 486
Query: 212 RTPLGLMH-----KTNPVAGVSRAAASMEVKDSAPLTNPGDSNQNV 252
PL M K++ S AA SMEV DSAP ++ D QNV
Sbjct: 487 HAPLIPMSGSPLMKSSMALNDSGAAGSMEVPDSAPASSSKDLIQNV 532
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/166 (56%), Positives = 115/166 (69%), Gaps = 13/166 (7%)
Query: 2 DAGKCIEPPVPSSSLCS---LGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLE--R 56
D K IEP V SS+CS + ++N+P NLKR+ DTE S CP + E++ R
Sbjct: 376 DGEKSIEPAVACSSVCSGNSVERASNDP---KHNLKRKCRDTEESECPSEDVEEESVGVR 432
Query: 57 KAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDY 116
K+ +G +++ R EVH ER+RRD+IN+KMRALQELIPNCNKVDKASML+EAI+Y
Sbjct: 433 KSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEY 492
Query: 117 LKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPP 162
LKTLQ QV +MSMGTG+CMP MMLPT GMQ +HA M HFPP
Sbjct: 493 LKTLQLQVQIMSMGTGLCMPPMMLPT---GMQHIHAA--HMGHFPP 533
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 125/292 (42%), Positives = 161/292 (55%), Gaps = 43/292 (14%)
Query: 2 DAGKCIEPPVPSSSLCSLGASNNNPACN-TFNLKRRYEDTEGSACPCDQYEKKL--ERKA 58
D K EP V SSS+ S G S P+ + T NLKR++ DTE S P + E++ +K
Sbjct: 250 DVEKTTEPLVASSSVGS-GNSAERPSDDPTENLKRKHRDTEESEGPSEDAEEESVGAKKP 308
Query: 59 VTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLK 118
+ R +++ R EVH ER+RRD+IN+KMRALQELIPNCNKVDKASML+EAI+YLK
Sbjct: 309 ASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 368
Query: 119 TLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGI-----------GM 167
TLQ QV +MSMG G+ MPSMMLP GM MHA M F PMG+ M
Sbjct: 369 TLQLQVQIMSMGAGIYMPSMMLPP---GMPHMHAA--HMGQFLPMGVGMGMGFRMGMPDM 423
Query: 168 DGRMQMGAGC--------NPAQFLMPPIPGATAV-----PGIQMPGFPGQPLPMSMLRTP 214
+G +GC + A F P+ G +A+ P +QM G GQ LPMS R P
Sbjct: 424 NGGY---SGCPMYQVPPMHGAHFPGSPMSGPSALHGMGGPSLQMFGLSGQGLPMSFPRAP 480
Query: 215 LGLMH-----KTNPVAGVSRAAASMEVKDSAPLTNPGDSNQNV--EINKRNV 259
L M KTN M+ DSA ++ D+ QN+ ++ + NV
Sbjct: 481 LMPMSGGPPPKTNREPNACGVVGPMDNLDSATASSSKDAIQNINSQVMRNNV 532
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/280 (43%), Positives = 152/280 (54%), Gaps = 35/280 (12%)
Query: 2 DAGKCIEPPVPSSSLCSLGASNNNPACN-TFNLKRRYEDTEGSACPCDQYEKKL--ERKA 58
D K EP V SSS+ S G S P+ + T NLKR++ DTE S P + E++ +K
Sbjct: 250 DVEKTTEPLVASSSVGS-GNSAERPSDDPTENLKRKHRDTEESEGPSEDAEEESVGAKKP 308
Query: 59 VTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLK 118
+ R +++ R EVH ER+RRD+IN+KMRALQELIPNCNKVDKASML+EAI+YLK
Sbjct: 309 ASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 368
Query: 119 TLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHF---------------PPM 163
TLQ QV +MSMG G+ MPSMMLP GM MHA M F P M
Sbjct: 369 TLQLQVQIMSMGAGMYMPSMMLPP---GMPHMHAA--HMGQFLPMGVGMGMGFRMGMPDM 423
Query: 164 GIGMDG-RMQMGAGCNPAQFLMPPIPGATAV-----PGIQMPGFPGQPLPMSMLRTPLGL 217
G G M + + A F P+ G +A+ P +QM G GQ LPMS R PL
Sbjct: 424 NGGYSGCPMYQVSPMHGAHFPGSPMSGPSALHGMGGPSLQMFGLSGQGLPMSFPRAPLMP 483
Query: 218 MH-----KTNPVAGVSRAAASMEVKDSAPLTNPGDSNQNV 252
M KTN M+ DSA ++ D+ QN+
Sbjct: 484 MSGGPPPKTNREPNACGVVGPMDNLDSATASSSKDAIQNI 523
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 123/283 (43%), Positives = 156/283 (55%), Gaps = 41/283 (14%)
Query: 2 DAGKCIEPPVPSSSLCSLGASNNNPACN-TFNLKRRYEDTEGSACPCDQYEKKL--ERKA 58
D K EP V SSS+ S G S P+ + T NLKR++ DTE S P + E++ +K
Sbjct: 250 DVEKTTEPLVASSSVGS-GNSAERPSDDPTENLKRKHRDTEESEGPSEDAEEESVGAKKP 308
Query: 59 VTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLK 118
+ R +++ R EVH ER+RRD+IN+KMRALQELIPNCNKVDKASML+EAI+YLK
Sbjct: 309 ASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 368
Query: 119 TLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGI-----------GM 167
TLQ QV +MSMG G+ MPSMMLP GM MHA M F PMG+ M
Sbjct: 369 TLQLQVQIMSMGAGMYMPSMMLPP---GMPHMHAA--HMGQFLPMGVGMGMGFRMGMPDM 423
Query: 168 DGRMQMGAGC--------NPAQFLMPPIPGATAV-----PGIQMPGFPGQPLPMSMLRTP 214
+G +GC + A F P+ G +A+ P +QM G GQ LPMS R P
Sbjct: 424 NGGY---SGCPMYQVPPMHGAHFPGSPMSGPSALHGMGGPSLQMFGLSGQGLPMSFPRAP 480
Query: 215 LGLMH-----KTNPVAGVSRAAASMEVKDSAPLTNPGDSNQNV 252
L M KTN M+ DSA ++ D+ QN+
Sbjct: 481 LMPMSGGPPPKTNREPNACGVVGPMDNLDSATASSSKDAIQNI 523
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/262 (42%), Positives = 155/262 (59%), Gaps = 28/262 (10%)
Query: 3 AGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERK--AVT 60
A K +EP + SSS CS ASN +++LK + +++E S P +E++ R A++
Sbjct: 316 AEKSVEPLLASSSTCSREASN----YPSYSLKSKCQESEESEHPSQSFEEEPRRAEGAMS 371
Query: 61 VRG-SKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKT 119
RG S +++ R+ E H E++RRD+INKKMR+LQELIPNC KVDK S+L+EAIDYLKT
Sbjct: 372 TRGGSAGSKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVDKISILDEAIDYLKT 431
Query: 120 LQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPP--------MGIGMDGRM 171
LQ QV +MSMG G+CM +M+P + +Q H + HF P MG+G+ +
Sbjct: 432 LQLQVQVMSMGAGMCMAPVMIPAVLQQIQAAH-----LPHFSPMGMGMGMGMGMGLGLGL 486
Query: 172 QMGAGCNPAQFLMPPIPGATAVPGI-----QMPGFPGQPLPMSMLRTPLGLMHKTNPVAG 226
+G GC+P QF PPI GA A+ GI QM G PGQ LPMS+ P +H +
Sbjct: 487 GLGLGCSPEQFPSPPILGAAALSGIAGTAPQMLGHPGQVLPMSLSSAPFIPLHAGSLTQS 546
Query: 227 VSRAAASMEVKDSAPLTNPGDS 248
V + KD P+ +PG S
Sbjct: 547 VLVPSVP---KDIHPVEHPGSS 565
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/283 (43%), Positives = 156/283 (55%), Gaps = 41/283 (14%)
Query: 2 DAGKCIEPPVPSSSLCSLGASNNNPACN-TFNLKRRYEDTEGSACPCDQYEKKL--ERKA 58
D K EP V SSS+ S G S P+ + T NLKR++ DTE S P + E++ +K
Sbjct: 250 DVEKTTEPLVASSSVGS-GNSAERPSDDPTENLKRKHRDTEESEGPSEDAEEESVGAKKP 308
Query: 59 VTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLK 118
+ R +++ R EVH ER+RRD+IN+KMRALQELIPNCNKVDKASML+EAI+YLK
Sbjct: 309 ASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 368
Query: 119 TLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGI-----------GM 167
TLQ QV +MSMG G+ MPSMMLP GM MHA M F PMG+ M
Sbjct: 369 TLQLQVQIMSMGAGMYMPSMMLPP---GMPHMHAA--HMGQFLPMGVGMGMGFRMGMPDM 423
Query: 168 DGRMQMGAGC--------NPAQFLMPPIPGATAVPG-----IQMPGFPGQPLPMSMLRTP 214
+G +GC + A F P+ G +A+ G +QM G GQ LPMS R P
Sbjct: 424 NGGY---SGCPMYQVPPMHGAHFPGSPMSGPSALHGMGGSSLQMFGLSGQGLPMSFPRAP 480
Query: 215 LGLMH-----KTNPVAGVSRAAASMEVKDSAPLTNPGDSNQNV 252
L M KTN M+ DSA ++ D+ QN+
Sbjct: 481 LMPMSGGPPPKTNREPNACGVVGPMDNLDSATASSSKDAIQNI 523
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 162/297 (54%), Gaps = 43/297 (14%)
Query: 2 DAGKCIEPPVPSSSLCSLGASNNNPACN-TFNLKRRYEDTEGSACPCDQYEKKL--ERKA 58
D K EP V SSS+ S G S P+ + T NLKR++ DTE S P + E++ +K
Sbjct: 250 DVEKTTEPLVASSSVGS-GNSAERPSDDPTENLKRKHRDTEESEGPSEDAEEESVGAKKP 308
Query: 59 VTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLK 118
+ R +++ R EVH ER+RRD+IN+KMRALQELIPNCNKVDKASML+EAI+YLK
Sbjct: 309 ASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 368
Query: 119 TLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGI-----------GM 167
TLQ QV +MSMG G+ MPSMMLP GM MHA M F PMG+ M
Sbjct: 369 TLQLQVQIMSMGAGMYMPSMMLPP---GMPHMHAA--HMGQFLPMGVGMGMGFRMGMPDM 423
Query: 168 DGRMQMGAGC--------NPAQFLMPPIPGATAV-----PGIQMPGFPGQPLPMSMLRTP 214
+G +GC + A F P+ G +A+ P +QM G GQ LPM R P
Sbjct: 424 NGGY---SGCPMYQVPPMHGAHFPGSPMSGPSALHGMGGPSLQMFGLSGQGLPMPFPRAP 480
Query: 215 LGLMH-----KTNPVAGVSRAAASMEVKDSAPLTNPGDSNQNV--EINKRNVEHHKI 264
L M KTN M+ DSA ++ D+ QN+ ++ + NV + I
Sbjct: 481 LMPMSGGPPPKTNREPNACGVVGPMDNLDSATASSSKDAIQNINSQVMQNNVANRSI 537
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/298 (42%), Positives = 159/298 (53%), Gaps = 54/298 (18%)
Query: 2 DAGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKL--ERKAV 59
D K EP V SSS+CS + NLKR++ +TE S P + E++ +KA
Sbjct: 394 DGEKTAEPIVASSSVCSGNSMERVSDEPMQNLKRKHRETEESEGPSEDVEEESVGGKKAA 453
Query: 60 TVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKT 119
RG +++ R EVH ER+RRD+IN+KMRALQELIPNCNKVDKASML+EAI+YLKT
Sbjct: 454 PARGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKT 513
Query: 120 LQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQM------ 173
LQ QV +MSMG G+ MPSMMLP G+ M H MS F PMG+GM M M
Sbjct: 514 LQLQVQIMSMGAGLYMPSMMLPPGVPHMHVAH-----MSQFSPMGVGMGFGMGMPDMIGG 568
Query: 174 GAGC--------NPAQFLMPPIPGATAVPGIQMPGFP-------GQP--------LPMS- 209
+GC + A F PP+ G +A+ G+ P G P +PMS
Sbjct: 569 SSGCSMIQVPPMHGAHFPSPPMSGPSALHGMGGSNLPMFGLSSQGHPMPYLCPPVMPMSG 628
Query: 210 --MLRTPLGLMHKTNPVAGVSRAAASMEVKDSAPLTNPGDSNQNVEINKRNVEHHKIR 265
+LRT LGL GV A + DSAP ++ DS RNV H I+
Sbjct: 629 GPLLRTTLGLN-----AGGV---AGPTDNLDSAPGSSSKDS-------IRNVNSHSIQ 671
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 138/242 (57%), Gaps = 36/242 (14%)
Query: 3 AGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLE--RKAVT 60
A K EP V SSS+CS ++ NLKR+ +DT+ S C + E++ +K
Sbjct: 365 AEKSKEPAVASSSVCSGNGTDQGSEEPNQNLKRKRKDTDDSECHSEDVEEESAGAKKTAG 424
Query: 61 VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
RG +++ R EVH ERKRRD+IN+KMRALQELIPNCNKVDKASML+EAI+YLKTL
Sbjct: 425 GRGGAGSKRSRAAEVHNLSERKRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTL 484
Query: 121 QFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRM--------- 171
Q QV +MSMG G+ MP MMLP GMQ MH AP M+ F PMG+GM
Sbjct: 485 QLQVQIMSMGAGLYMPPMMLPA---GMQHMH--APHMAPFSPMGVGMHMGYGMGYGMGMP 539
Query: 172 QMGAGCNPAQFLMPPIP-------------GATAVPGIQM---PGF--PGQPLPMSMLRT 213
M G ++F M +P G+TA G+ PGF PGQ PM M R
Sbjct: 540 DMNGGS--SRFPMIQVPQMQGTHIPVAHMSGSTAFHGMARANPPGFGLPGQGHPMPMPRA 597
Query: 214 PL 215
P+
Sbjct: 598 PM 599
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 133/224 (59%), Gaps = 14/224 (6%)
Query: 3 AGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVR 62
A K +EP V SSS+CS ++ NLKR+ +DT+ S C ++ E +K +
Sbjct: 304 AEKSMEPAVASSSVCSGTGADQGSDEPNQNLKRKTKDTDDSECHSEE-ESAGAKKTAGGQ 362
Query: 63 GSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQF 122
G +++ R EVH ER+RRD+IN+KMRALQELIPNCNKVDKASML+EAI+YLKTLQ
Sbjct: 363 GGAGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQL 422
Query: 123 QVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQF 182
QV +MSMG G+ MP MMLP GMQ MH AP M+ F PM G
Sbjct: 423 QVQIMSMGAGLYMPPMMLPA---GMQHMH--APHMAPFSPM-----GVGMHMGYGMGYGM 472
Query: 183 LMPPIPGATA-VPGIQMPGFPGQPLPMSMLRTPLGL--MHKTNP 223
MP + G ++ P IQ+P G +P++ + P L M ++NP
Sbjct: 473 GMPDMNGGSSRFPMIQVPQMQGTHIPVAHMSGPTALHGMARSNP 516
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 104/160 (65%), Gaps = 7/160 (4%)
Query: 3 AGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLE--RKAVT 60
A K +E V SSS+CS ++ +LKR+ DTE S C + E + +K
Sbjct: 398 ADKGMEVAVASSSVCSGNGADRGSDDPNRDLKRKSRDTEDSECHSEDVEDESVGVKKGAA 457
Query: 61 VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
RG +++ R EVH ER+RRD+IN+KMRALQELIPNCNKVDKASML+EAI+YLKTL
Sbjct: 458 GRGVAGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTL 517
Query: 121 QFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHF 160
Q QV MMSMG G+ MP MMLP GMQ MH AP M+ F
Sbjct: 518 QLQVQMMSMGAGLYMPQMMLPA---GMQHMH--APHMAAF 552
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 160/306 (52%), Gaps = 50/306 (16%)
Query: 2 DAGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTV 61
+A K E V +SS+CS N + +++ + + C Q + L+ + +
Sbjct: 386 EARKAPEATVATSSVCS----GNGAGSDELWRQQKRKCQAQAECSASQ-DDDLDDEPGVL 440
Query: 62 R--GSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKT 119
R G++S ++ RT EVH ER+RRD+IN+KMRALQELIPNCNK+DKASML+EAI+YLKT
Sbjct: 441 RKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKT 500
Query: 120 LQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNP 179
LQ QV MMSMGTG+C+P M+LPT + H P M+HFP +G+G+ M + N
Sbjct: 501 LQLQVQMMSMGTGLCIPPMLLPTAM-----QHLQIPPMAHFPHLGMGLGYGMGVFDMSNT 555
Query: 180 AQFLMPPIPGA--------------TAVPGIQ---MPGFPGQPLPMSMLRTP-----LGL 217
MPP+PGA +PG M G PGQ +P S P GL
Sbjct: 556 GALQMPPMPGAHFPCPMIPGASPQGLGIPGTSTMPMFGVPGQTIPSSASSVPPFASLAGL 615
Query: 218 MHKTNPVAGVSRAAASMEV---------------KDSAPLTNPGDSNQNVEINKRNVEHH 262
+ + V VS A A+M K++ NPGDS + + N E+
Sbjct: 616 PVRPSGVPQVSGAMANMVQDQQQGIANQQQQCLNKEAIQGANPGDSQMQIIMQGDN-ENF 674
Query: 263 KIRPSA 268
+I SA
Sbjct: 675 RIPSSA 680
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/305 (37%), Positives = 158/305 (51%), Gaps = 48/305 (15%)
Query: 2 DAGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTV 61
+A K E V +SS+CS N + +++ + + C Q + + V
Sbjct: 374 EARKAPEATVATSSVCS----GNGAGSDELWRQQKRKCQAQAECSASQDDDLDDEPGVLR 429
Query: 62 R-GSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
+ G++S ++ RT EVH ER+RRD+IN+KMRALQELIPNCNK+DKASML+EAI+YLKTL
Sbjct: 430 KSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTL 489
Query: 121 QFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPA 180
Q QV MMSMGTG+C+P M+LPT + H P M+HFP +G+G+ M + N
Sbjct: 490 QLQVQMMSMGTGLCIPPMLLPTAM-----QHLQIPPMAHFPHLGMGLGYGMGVFDMSNTG 544
Query: 181 QFLMPPIPGA--------------TAVPGIQ---MPGFPGQPLPMSMLRTP-----LGLM 218
MPP+PGA +PG M G PGQ +P S P GL
Sbjct: 545 ALQMPPMPGAHFPCPMIPGASPQGLGIPGTSTMPMFGVPGQTIPSSASSVPPFASLAGLP 604
Query: 219 HKTNPVAGVSRAAASMEV---------------KDSAPLTNPGDSNQNVEINKRNVEHHK 263
+ + V VS A A+M K++ NPGDS + + N E+ +
Sbjct: 605 VRPSGVPQVSGAMANMVQDQQQGIANQQQQCLNKEAIQGANPGDSQMQIIMQGDN-ENFR 663
Query: 264 IRPSA 268
I SA
Sbjct: 664 IPSSA 668
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 158/306 (51%), Gaps = 50/306 (16%)
Query: 2 DAGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTV 61
+A K E V +SS+CS N + +++ + + C Q + + V
Sbjct: 246 EARKAPEATVATSSVCS----GNGAGSDELWRQQKRKCQAQAECSASQDDDLDDEPGVLR 301
Query: 62 R-GSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
+ G++S ++ RT EVH ER+RRD+IN+KMRALQELIPNCNK+DKASML+EAI+YLKTL
Sbjct: 302 KSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTL 361
Query: 121 QFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPA 180
Q QV MMSMGTG+C+P M+LPT + H P M+HFP +G+G+ M + N
Sbjct: 362 QLQVQMMSMGTGLCIPPMLLPTAM-----QHLQIPPMAHFPHLGMGLGYGMGVFDMSNTG 416
Query: 181 QFLMPPIPGA--------------TAVPGIQ---MPGFPGQPLPMSMLRTP-----LGLM 218
MPP+PGA +PG M G PGQ +P S P GL
Sbjct: 417 ALQMPPMPGAHFPCPMIPGASPQGLGIPGTSTMPMFGVPGQTIPSSASSVPPFASLAGLP 476
Query: 219 HKTNPVAGVSRAAASMEVKDSAPL----------------TNPGDSNQNVEINKRNVEHH 262
+ + V VS A A+M V+D NPGDS + + N E+
Sbjct: 477 VRPSGVPQVSGAMANM-VQDQQQGIANQQQQCLNKEAIQGANPGDSQMQIIMQGDN-ENF 534
Query: 263 KIRPSA 268
+I SA
Sbjct: 535 RIPSSA 540
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/305 (37%), Positives = 158/305 (51%), Gaps = 48/305 (15%)
Query: 2 DAGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTV 61
+A K E V +SS+CS N + +++ + + C Q + + V
Sbjct: 318 EARKAPEATVATSSVCS----GNGAGSDELWRQQKRKCQAQAECSASQDDDLDDEPGVLR 373
Query: 62 R-GSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
+ G++S ++ RT EVH ER+RRD+IN+KMRALQELIPNCNK+DKASML+EAI+YLKTL
Sbjct: 374 KSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTL 433
Query: 121 QFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPA 180
Q QV MMSMGTG+C+P M+LPT + H P M+HFP +G+G+ M + N
Sbjct: 434 QLQVQMMSMGTGLCIPPMLLPTAM-----QHLQIPPMAHFPHLGMGLGYGMGVFDMSNTG 488
Query: 181 QFLMPPIPGA--------------TAVPGIQ---MPGFPGQPLPMSMLRTP-----LGLM 218
MPP+PGA +PG M G PGQ +P S P GL
Sbjct: 489 ALQMPPMPGAHFPCPMIPGASPQGLGIPGTSTMPMFGVPGQTIPSSASSVPPFASLAGLP 548
Query: 219 HKTNPVAGVSRAAASMEV---------------KDSAPLTNPGDSNQNVEINKRNVEHHK 263
+ + V VS A A+M K++ NPGDS + + N E+ +
Sbjct: 549 VRPSGVPQVSGAMANMVQDQQQGIANQQQQCLNKEAIQGANPGDSQMQIIMQGDN-ENFR 607
Query: 264 IRPSA 268
I SA
Sbjct: 608 IPSSA 612
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/235 (43%), Positives = 128/235 (54%), Gaps = 31/235 (13%)
Query: 2 DAGKCIEPPVPSSSLCSL----GASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLE-- 55
D+ K +E V ++SLCS GAS++ P N KR+ DTE S D E+
Sbjct: 393 DSEKAVES-VFAASLCSRNSVEGASDDPP----HNRKRKCHDTEDSEWHSDDVEEDCNDV 447
Query: 56 RKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAID 115
++ + RG+ S R R EVH ER+RRD+IN+KMRALQELIPNCNKVDKASML+EAI+
Sbjct: 448 KRVTSARGAGSKRS-RAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIE 506
Query: 116 YLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAP------QMSHFPPMGIG--- 166
YLKTLQ QV +MSMG G+ MP MM P + M H P P M G
Sbjct: 507 YLKTLQLQVQIMSMGAGLFMPPMMFPGAMAPMNTPHIYPPMGIGMGYGIGMPDMNGGIPM 566
Query: 167 -----MDGRMQMGAGCNPAQFLMPPIPGATAVPGIQMPGFPGQPLPMSMLRTPLG 216
M G M PAQ +M +P + Q+ G PGQ LPM M R P+
Sbjct: 567 VQVPHMQG-MHFPGPSMPAQTVMHGLPSSN----FQVLGLPGQGLPMPMPRGPVA 616
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 143/256 (55%), Gaps = 36/256 (14%)
Query: 3 AGKCIEPPVPSSSLCS-LGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTV 61
A K + V +SS+CS G N+ P ++ ++R E C Q E + +
Sbjct: 342 ARKAPDATVTTSSVCSGNGIVNDEP----WHQQKRKIQAE---CSASQDEDLDDESGALL 394
Query: 62 RGS-KSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
R + +S ++ RT EVH ER+RRD+IN+KMRALQELIPNCNK+DKASML+EAI+YLKTL
Sbjct: 395 RSTNRSMKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTL 454
Query: 121 QFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQM----GAG 176
Q QV MMSMGTG+C+P M+LP + H QM+HFP +G+G+ M + G
Sbjct: 455 QLQVQMMSMGTGLCIPPMLLPPAM-----QHLQLSQMAHFPHLGMGLGYGMGVFDMNNTG 509
Query: 177 CNP------AQFLMPPIPGATA----VPG---IQMPGFPGQPLPMSMLRTP-----LGLM 218
P A F IPGA A +PG +QM G PGQ +P S P GL+
Sbjct: 510 TIPVSPMPGAHFPYQMIPGAAAQGLGIPGANAMQMFGIPGQAIPSSGSSIPPFTSLAGLL 569
Query: 219 HKTNPVAGVSRAAASM 234
+ N VS A SM
Sbjct: 570 VRQNLAPEVSGAMPSM 585
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/243 (44%), Positives = 133/243 (54%), Gaps = 34/243 (13%)
Query: 2 DAGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKL--ERKAV 59
D K EP V SSS+ S + T NLKR++ DTE S P + E++ +K
Sbjct: 386 DVEKTKEPVVASSSVGSDNSVERASDDPTENLKRKHRDTEESEGPSEDVEEESVGAKKQA 445
Query: 60 TVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKT 119
R +++ R EVH ER+RRD+IN+KMRALQELIPNCNKVDKASML+EAI+YLKT
Sbjct: 446 PARAGNGSKRNRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKT 505
Query: 120 LQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQM------ 173
LQ QV +MSMG G+ MPSMMLP GM MHA M F PMG+GM RM M
Sbjct: 506 LQLQVQIMSMGAGLYMPSMMLPP---GMPHMHAA--HMGQFLPMGVGMGMRMGMGMGFGM 560
Query: 174 --------GAGCNPAQ--------FLMPPIPGATAV-----PGIQMPGFPGQPLPMSMLR 212
+GC Q F P+ G +A+ +QM G GQ PMS
Sbjct: 561 SMPDVNGGSSGCPMYQVPPMHGPHFSGQPMSGLSALHRMGGSNLQMFGLSGQGFPMSFPC 620
Query: 213 TPL 215
PL
Sbjct: 621 APL 623
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 120/199 (60%), Gaps = 21/199 (10%)
Query: 63 GSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQF 122
GS +++ R+ E H E++RRD+INKKMR+LQELIPNC KVDK S+L+EAIDYLKTLQ
Sbjct: 6 GSAGSKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVDKISILDEAIDYLKTLQL 65
Query: 123 QVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPP--------MGIGMDGRMQMG 174
QV +MSMG G+CM +M+P + +Q H + HF P MG+G+ + +G
Sbjct: 66 QVQVMSMGAGMCMAPVMIPAVLQQIQAAH-----LPHFSPMGMGMGMGMGMGLGLGLGLG 120
Query: 175 AGCNPAQFLMPPIPGATAVPGI-----QMPGFPGQPLPMSMLRTPLGLMHKTNPVAGVSR 229
GC+P QF PPI GA A+ GI QM G PGQ LPMS+ P +H + V
Sbjct: 121 LGCSPEQFPSPPILGAAALSGIAGTAPQMLGHPGQVLPMSLSSAPFIPLHAGSLTQSVLV 180
Query: 230 AAASMEVKDSAPLTNPGDS 248
+ KD P+ +PG S
Sbjct: 181 PSVP---KDIHPVEHPGSS 196
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/282 (40%), Positives = 148/282 (52%), Gaps = 41/282 (14%)
Query: 5 KCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKL--ERKAVTVR 62
K +EP V +SS+CS + T LKR++ +T+ S C D E++ +K R
Sbjct: 389 KTVEPVV-ASSVCSGNSVERGSDDPTQALKRKFRETDESECHSDDVEEEYMGVKKGDHAR 447
Query: 63 GSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQF 122
G S R R EVH ER+RRD+IN+KMRALQELIPNCNKVDKASML+EAI+YLKTLQ
Sbjct: 448 GMGSKRS-RAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQL 506
Query: 123 QVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQM--------- 173
QV MMSMG M GMQ MH P M+HF PMG+GM M +
Sbjct: 507 QVQMMSMG---AGMYMPPMMLPPGMQHMH--GPCMAHFSPMGVGMGMGMGLGMGFGMGMP 561
Query: 174 ---GAGCNPAQFLMPPIPGA----------TAVPG-----IQMPGFPGQPLPMSMLRTPL 215
GA + +PP+ GA TA G +QM G P Q +P+ M R PL
Sbjct: 562 DMNGASSSYPMLQVPPMQGAHFPGSHMAGHTAFNGMMGSNLQMFGLPSQGVPVPMQRAPL 621
Query: 216 -----GLMHKTNPVAGVSRAAASMEVKDSAPLTNPGDSNQNV 252
G K++ + +E +SAP++ DS QN+
Sbjct: 622 APSSAGPFVKSSAGLNAGSSGGPVENVESAPVSGSKDSVQNM 663
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/262 (40%), Positives = 144/262 (54%), Gaps = 41/262 (15%)
Query: 2 DAGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTV 61
+A K I+ ++S+CS ASN+ +LKR + A P + +++ E +
Sbjct: 319 NAEKYIDQLAAATSICSRRASND---LTHSSLKRTNAHLKEMASPSENADEEEE-----I 370
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
S S +KKR P+VH ERKRRDKINKKMRALQ LIPN +KVDKASML++AI+YLKTLQ
Sbjct: 371 PKSTSTKKKRIPQVHSLSERKRRDKINKKMRALQALIPNSDKVDKASMLDKAIEYLKTLQ 430
Query: 122 FQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQ 181
Q+ MMSM MP MM+PT + +Q AP +SHF PM +GM RM M +P+
Sbjct: 431 LQLQMMSMRGSCYMPPMMIPTALQQIQ-----APYLSHFSPM-MGM--RMPM----SPSL 478
Query: 182 FLMPPIPGATAVPGIQMPGFPGQPLPMSML--RTPL------GLMHKTNPVAGVSRAAAS 233
F I G A GQ PM+ + +TP M T+ V AAA+
Sbjct: 479 FSNSAILGLAA----------GQMQPMAPMTSQTPFVPLVGGSSMQSTSTVTPFCGAAAA 528
Query: 234 MEVKD---SAPLTNPGDSNQNV 252
M VK + P +N ++ QN+
Sbjct: 529 MPVKPIGLADPFSNLKEAVQNI 550
>gi|42569994|ref|NP_182220.2| transcription factor PIL1 [Arabidopsis thaliana]
gi|75301051|sp|Q8L5W8.1|PIL1_ARATH RecName: Full=Transcription factor PIL1; AltName: Full=Basic
helix-loop-helix protein 124; Short=AtbHLH124;
Short=bHLH 124; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 1; AltName: Full=Transcription
factor EN 110; AltName: Full=bHLH transcription factor
bHLH124
gi|22535492|dbj|BAC10689.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|61742691|gb|AAX55166.1| hypothetical protein At2g46970 [Arabidopsis thaliana]
gi|330255685|gb|AEC10779.1| transcription factor PIL1 [Arabidopsis thaliana]
Length = 416
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 118/231 (51%), Gaps = 43/231 (18%)
Query: 3 AGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPC----DQYEKKLERKA 58
G+ E SSS S G S + C+ LKR+Y D E E +
Sbjct: 159 VGRSTELYFASSSKFSRGTSRDLSCCS---LKRKYGDIEEEESTYLSNNSDDESDDAKTQ 215
Query: 59 VTVRGSK-SNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYL 117
V R K ++KR+ EVHK YERKRRD+ NKKMRALQ+L+PNC K DKAS+L+EAI Y+
Sbjct: 216 VHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYM 275
Query: 118 KTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGC 177
+TLQ QV MMSMG G+ P MLP G H+ PMG+G M MGA
Sbjct: 276 RTLQLQVQMMSMGNGLIRPPTMLPMG---------------HYSPMGLG----MHMGAAA 316
Query: 178 NPA---QFLMPPIPGATAVPGIQMPGFPGQ----PLPMSMLRTPLGLMHKT 221
P QFL P+ +Q GFPG P +S L P GL+ T
Sbjct: 317 TPTSIPQFL--PM-------NVQATGFPGMNNAPPQMLSFLNHPSGLIPNT 358
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 114/204 (55%), Gaps = 23/204 (11%)
Query: 9 PPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNR 68
PP P+++ S S+N LKR T + D + E + ++S +
Sbjct: 265 PPPPATATTSSVCSDNG---ERSQLKRSSHQTLEWSVSQDDEDLDDEAGGLRRSAARSTK 321
Query: 69 KKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+ RT EVH ER+RRD+IN+KMRALQELIPNCNK+DKASMLEEAI+YLKTLQ QV MMS
Sbjct: 322 RGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMS 381
Query: 129 -MGT-GVCMPSMMLPTGIIGMQQMHAVAPQMSHFP-----PMGIGM---DGRMQMGAGCN 178
MGT G+CMP M + MQ M P M+HF MG GM D R+ AG
Sbjct: 382 TMGTAGMCMPPM------LAMQHMQ--MPPMAHFHHHHLGAMGFGMGPFDPRLVAAAGA- 432
Query: 179 PAQFLMPPIPGATAVPGIQMPGFP 202
AQF IPGA G MP P
Sbjct: 433 -AQFPYQMIPGAPMFGGHAMPAPP 455
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 114/204 (55%), Gaps = 23/204 (11%)
Query: 9 PPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNR 68
PP P+++ S S+N LKR T + D + E + ++S +
Sbjct: 269 PPPPATATTSSVCSDNG---ERSQLKRSSHQTLEWSVSQDDEDLDDEAGGLRRSAARSTK 325
Query: 69 KKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+ RT EVH ER+RRD+IN+KMRALQELIPNCNK+DKASMLEEAI+YLKTLQ QV MMS
Sbjct: 326 RGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMS 385
Query: 129 -MGT-GVCMPSMMLPTGIIGMQQMHAVAPQMSHFP-----PMGIGM---DGRMQMGAGCN 178
MGT G+CMP M + MQ M P M+HF MG GM D R+ AG
Sbjct: 386 TMGTAGMCMPPM------LAMQHMQ--MPPMAHFHHHHLGAMGFGMGPFDPRLVAAAGA- 436
Query: 179 PAQFLMPPIPGATAVPGIQMPGFP 202
AQF IPGA G MP P
Sbjct: 437 -AQFPYQMIPGAPMFGGHAMPAPP 459
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 114/204 (55%), Gaps = 23/204 (11%)
Query: 9 PPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNR 68
PP P+++ S S+N LKR T + D + E + ++S +
Sbjct: 265 PPPPATATTSSVCSDNG---ERSQLKRSSHQTLEWSVSQDDEDLDDEAGGLRRSAARSTK 321
Query: 69 KKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+ RT EVH ER+RRD+IN+KMRALQELIPNCNK+DKASMLEEAI+YLKTLQ QV MMS
Sbjct: 322 RGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMS 381
Query: 129 -MGT-GVCMPSMMLPTGIIGMQQMHAVAPQMSHFP-----PMGIGM---DGRMQMGAGCN 178
MGT G+CMP M + MQ M P M+HF MG GM D R+ AG
Sbjct: 382 TMGTAGMCMPPM------LAMQHMQ--MPPMAHFHHHHLGAMGFGMGPFDPRLVAAAGA- 432
Query: 179 PAQFLMPPIPGATAVPGIQMPGFP 202
AQF IPGA G MP P
Sbjct: 433 -AQFPYQMIPGAPMFGGHAMPAPP 455
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 114/205 (55%), Gaps = 32/205 (15%)
Query: 2 DAGKCIEPPVPSSSLCSLGASNNNPACNTFNLK-RRYEDTEGSACPCDQYEKKLERKAVT 60
+A C EP + SSS+CSLGASN+ NL R++EDTE D + + ++
Sbjct: 265 NANMCHEPLLASSSVCSLGASNDP------NLGLRKHEDTETYLSDNDGEPEDMVKQD-- 316
Query: 61 VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
R R+ R P VH E+KRR+KINKKMR L+ELIPNCNKVDKASML++AIDYLKTL
Sbjct: 317 -RDGNRVRRIRNPVVHNLSEKKRREKINKKMRTLKELIPNCNKVDKASMLDDAIDYLKTL 375
Query: 121 QFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPA 180
+ Q+ +MSMG G+ P MMLP H + P Q+G G P
Sbjct: 376 KLQLQIMSMGNGL-WPLMMLPAATTA----HHMNP----------------QLGMGFRPP 414
Query: 181 QFLMPPIPGATAVPGIQMPG-FPGQ 204
Q +PP A +QM G FP Q
Sbjct: 415 QLPIPPSLSAITDNRLQMFGCFPNQ 439
>gi|28207148|gb|AAO37214.1| hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 117/231 (50%), Gaps = 43/231 (18%)
Query: 3 AGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPC----DQYEKKLERKA 58
G+ E SSS S G S + C+ LKR+Y D E E +
Sbjct: 159 VGRSTELYFASSSKFSRGTSRDLSCCS---LKRKYGDIEEEESTYLSNNSDDESDDAKTQ 215
Query: 59 VTVRGSK-SNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYL 117
V R K ++KR+ EVHK YERKRRD+ NKKMRALQ+L+PNC K DKAS+L+EAI Y+
Sbjct: 216 VHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYM 275
Query: 118 KTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGC 177
+TLQ QV MMSMG G+ P MLP G + PMG+G M MGA
Sbjct: 276 RTLQLQVQMMSMGNGLIRPPTMLPMG---------------KYSPMGLG----MHMGAAA 316
Query: 178 NPA---QFLMPPIPGATAVPGIQMPGFPGQ----PLPMSMLRTPLGLMHKT 221
P QFL P+ +Q GFPG P +S L P GL+ T
Sbjct: 317 TPTSIPQFL--PM-------NVQATGFPGMNNAPPQMLSFLNHPSGLIPNT 358
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 118/204 (57%), Gaps = 24/204 (11%)
Query: 11 VPSSSLCSLGASNNNPACNTFNLKR-RYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRK 69
V +SS+CS + LKR R+ + S P + + E A ++S ++
Sbjct: 270 VTTSSVCSGNGGRSQ-------LKRSRHLAADCSVSPDEDLDD--EPGATRRSAARSAKR 320
Query: 70 KRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
RT EVH ER+RRD+IN+KMRALQELIPNCNKVDK+SMLEEAI+YLKTLQ QV MMSM
Sbjct: 321 CRTAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKSSMLEEAIEYLKTLQLQVQMMSM 380
Query: 130 GTGVCMP--SMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAG-------CNPA 180
GTG+CMP +M+LP MQQ M+HFP +G+G+ M AG C A
Sbjct: 381 GTGLCMPPAAMLLP----AMQQQLLHHHPMAHFPHLGMGLGFGMGAAAGFDMLPFPCVAA 436
Query: 181 QFLMPPIPGAT-AVPGIQMPGFPG 203
P PGA VPG MP P
Sbjct: 437 GAHFPCPPGAMFGVPGQAMPSLPA 460
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 96/150 (64%), Gaps = 7/150 (4%)
Query: 13 SSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRG-SKSNRKKR 71
+SS+CS + ++ ++R T + C Q + + R S+ ++ R
Sbjct: 327 TSSVCSGNGAGTGKDDESWRQQKRK--TLQAECSASQDDDPDDESGGMRRSCSRGAKRSR 384
Query: 72 TPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGT 131
T EVH ER+RRD+IN+KMRALQELIPNCNK+DKASML+EAI+YLKTLQ QV MMSMG+
Sbjct: 385 TAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMGS 444
Query: 132 GVCMPSMMLPTGIIGMQQMHAVAPQMSHFP 161
G+C+P M+LP + +Q + P +HFP
Sbjct: 445 GLCIPPMLLPPAMQHLQ----IPPAAAHFP 470
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 96/150 (64%), Gaps = 7/150 (4%)
Query: 13 SSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRG-SKSNRKKR 71
+SS+CS + ++ ++R T + C Q + + R S+ ++ R
Sbjct: 124 TSSVCSGNGAGTGKDDESWRQQKR--KTLQAECSASQDDDPDDESGGMRRSCSRGAKRSR 181
Query: 72 TPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGT 131
T EVH ER+RRD+IN+KMRALQELIPNCNK+DKASML+EAI+YLKTLQ QV MMSMG+
Sbjct: 182 TAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMGS 241
Query: 132 GVCMPSMMLPTGIIGMQQMHAVAPQMSHFP 161
G+C+P M+LP + +Q + P +HFP
Sbjct: 242 GLCIPPMLLPPAMQHLQ----IPPAAAHFP 267
>gi|357511681|ref|XP_003626129.1| Transcription factor PIF3 [Medicago truncatula]
gi|355501144|gb|AES82347.1| Transcription factor PIF3 [Medicago truncatula]
Length = 682
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/217 (43%), Positives = 121/217 (55%), Gaps = 20/217 (9%)
Query: 5 KCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKL--ERKAVTVR 62
KC E V SSS+CS + + NLKR+ D+E S + +E + ++ R
Sbjct: 361 KCTELTVASSSVCSDNGVHRSSDDANQNLKRKNLDSEDSEWHSEDFEDESIGVKRTDHGR 420
Query: 63 GSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQF 122
G ++K R+ EVH ER+RRD+IN++MRALQELIPNCNK DKASML+EAI+YLK+LQ
Sbjct: 421 GVTGSKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKADKASMLDEAIEYLKSLQL 480
Query: 123 QVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQF 182
Q+ +MSMG G M LP GMQ MHA M F PM + MQMG G Q
Sbjct: 481 QLQIMSMGGGGLYMPMTLPA---GMQHMHAA--HMFPFSPMSVA----MQMGLGVPQFQG 531
Query: 183 LMPPI---PGATAVPGI-----QMPGF-PGQPLPMSM 210
P+ G A+ G+ QM G GQ L M M
Sbjct: 532 THLPVAHTSGLAALHGMVRPNPQMFGLQAGQGLHMPM 568
>gi|297828431|ref|XP_002882098.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
gi|297327937|gb|EFH58357.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
Length = 413
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 112/200 (56%), Gaps = 38/200 (19%)
Query: 33 LKRRYEDTEG------SACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDK 86
LKR++ D E S P D+ + + +R + RK R+ EVHK YERKRRD+
Sbjct: 183 LKRKHGDIEEEESTYLSNNPDDESDDAKTQVHARIRKPVTKRK-RSTEVHKLYERKRRDE 241
Query: 87 INKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIG 146
NKKMRALQ+++PNC K DKAS+L+EA+ Y++TLQ QV MMSMG G+ P MMLP G
Sbjct: 242 FNKKMRALQDILPNCYKDDKASLLDEAVKYMRTLQHQVQMMSMGNGLIRPPMMLPMG--- 298
Query: 147 MQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPA---QFLMPPIPGATAVPGI-----QM 198
H+PPMG+G M +GA P QFL I G T+ PGI QM
Sbjct: 299 ------------HYPPMGLG----MHVGAAATPTSVPQFLPMNIQG-TSFPGINNASSQM 341
Query: 199 PGFPGQP---LPMSMLRTPL 215
F P +P + + +PL
Sbjct: 342 LRFLNHPTGLIPNTPIFSPL 361
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 97/160 (60%), Gaps = 15/160 (9%)
Query: 1 LDAGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVT 60
++ K E V + SLCS ++ ++R E SA D + E +
Sbjct: 291 METKKACEVAVATPSLCSGNG-------ESWREQKRKSQAECSASQDDDLDD--ESGGMR 341
Query: 61 VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
G + ++ RT EVH ER+RRD+IN+KMRALQELIPNCNK+DKASML+EAI+YLKTL
Sbjct: 342 GSGGRGTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTL 401
Query: 121 QFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHF 160
Q QV MM+MG+G+C+P M+LP + M P ++HF
Sbjct: 402 QLQVQMMAMGSGLCIPPMLLP------RAMQLQIPSIAHF 435
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 97/160 (60%), Gaps = 15/160 (9%)
Query: 1 LDAGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVT 60
++ K E V + SLCS ++ ++R E SA D + E +
Sbjct: 101 METKKACEVAVATPSLCSGNG-------ESWREQKRKSQAECSASQDDDLDD--ESGGMR 151
Query: 61 VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
G + ++ RT EVH ER+RRD+IN+KMRALQELIPNCNK+DKASML+EAI+YLKTL
Sbjct: 152 GSGGRGTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTL 211
Query: 121 QFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHF 160
Q QV MM+MG+G+C+P M+LP + M P ++HF
Sbjct: 212 QLQVQMMAMGSGLCIPPMLLP------RAMQLQIPSIAHF 245
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 116/204 (56%), Gaps = 29/204 (14%)
Query: 14 SSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLER--KAVTVR-GSKSNRKK 70
SS+CSL ASN+ F +++ +EDT+ S D E+ E K VR G++ R
Sbjct: 152 SSVCSLEASNDL----NFGVRKSHEDTDDSPYLSDNDEETQENIVKEKPVREGNRVKRSY 207
Query: 71 RTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMG 130
R +VH ERKRRDKIN+K+RAL+ELIPNCNK+DKASML++AIDYLKTL+ Q+ +MSMG
Sbjct: 208 RNAKVHNLSERKRRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKTLKLQLQIMSMG 267
Query: 131 TGVCMP---SMMLPT-------GIIGMQQMHAVAPQMSH-FPPMGIGM----DGRMQMGA 175
+CMP MMLP + M P + P MG G+ + R+QM
Sbjct: 268 RALCMPLNHFMMLPAHHMNMNMNMNAQHLMMGFRPHVQFPIPQMGDGVTNNNNDRVQMFG 327
Query: 176 GCNPAQFLMPP---IPGATAVPGI 196
N +PP IP A +P I
Sbjct: 328 FSNQ----LPPQMSIPNAPFIPPI 347
>gi|87241328|gb|ABD33186.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 689
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/224 (42%), Positives = 122/224 (54%), Gaps = 27/224 (12%)
Query: 5 KCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKL--ERKAVTVR 62
KC E V SSS+CS + + NLKR+ D+E S + +E + ++ R
Sbjct: 361 KCTELTVASSSVCSDNGVHRSSDDANQNLKRKNLDSEDSEWHSEDFEDESIGVKRTDHGR 420
Query: 63 GSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-------DKASMLEEAID 115
G ++K R+ EVH ER+RRD+IN++MRALQELIPNCNKV DKASML+EAI+
Sbjct: 421 GVTGSKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKVDLFFLQADKASMLDEAIE 480
Query: 116 YLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGA 175
YLK+LQ Q+ +MSMG G M LP GMQ MHA M F PM + MQMG
Sbjct: 481 YLKSLQLQLQIMSMGGGGLYMPMTLPA---GMQHMHAA--HMFPFSPMSVA----MQMGL 531
Query: 176 GCNPAQFLMPPI---PGATAVPGI-----QMPGF-PGQPLPMSM 210
G Q P+ G A+ G+ QM G GQ L M M
Sbjct: 532 GVPQFQGTHLPVAHTSGLAALHGMVRPNPQMFGLQAGQGLHMPM 575
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/81 (71%), Positives = 70/81 (86%), Gaps = 2/81 (2%)
Query: 63 GSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQF 122
++S ++ RT EVH ER+RRD+IN+KMRALQELIPNCNK+DKASMLEEAI+YLKTLQ
Sbjct: 253 AARSAKRSRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQL 312
Query: 123 QVMMMSMGTGVCMP--SMMLP 141
QV MMSMGTG+CMP +M+LP
Sbjct: 313 QVQMMSMGTGLCMPPAAMLLP 333
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 115/204 (56%), Gaps = 29/204 (14%)
Query: 14 SSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLER--KAVTVRG-SKSNRKK 70
SS+CSL ASN+ F +++ +EDT+ S D E+ E K VR ++ R
Sbjct: 152 SSVCSLEASNDL----NFGVRKSHEDTDDSPYLSDNDEETQENIVKEKPVRERNRVKRSY 207
Query: 71 RTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMG 130
R +VH ERKRRDKIN+K+RAL+ELIPNCNK+DKASML++AIDYLKTL+ Q+ +MSMG
Sbjct: 208 RNAKVHNLSERKRRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKTLKLQLQIMSMG 267
Query: 131 TGVCMP---SMMLPT-------GIIGMQQMHAVAPQMSH-FPPMGIGM----DGRMQMGA 175
+CMP MMLP + M P + P MG G+ + R+QM
Sbjct: 268 RALCMPLNHFMMLPAHHMNMNMNMNAQHLMMGFRPHVQFPIPQMGDGVTNNNNDRVQMFG 327
Query: 176 GCNPAQFLMPP---IPGATAVPGI 196
N +PP IP A VP I
Sbjct: 328 FSNQ----LPPQMSIPNAPFVPPI 347
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 113/217 (52%), Gaps = 53/217 (24%)
Query: 6 CIEPPVPSSSLCSLGASNNNPACNTFNLK-RRYEDTEGSACPCDQYEKKLERKAVTVRGS 64
C EP + SSS+CSLGASN+ NL R++EDT+ S D E + + +
Sbjct: 277 CHEPLLASSSVCSLGASNDP------NLGFRKHEDTDDSTYLSD---NDGEPEDMVKQDR 327
Query: 65 KSNRKKRT--PEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQF 122
+ NR KR+ PEVH E+KRR+KINKKMR L++LIPNCNKVDKASML++AIDYLKTL+
Sbjct: 328 EGNRVKRSRNPEVHNLSEKKRREKINKKMRTLKDLIPNCNKVDKASMLDDAIDYLKTLKL 387
Query: 123 QV----MMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCN 178
Q+ +MSMG+G+ P MM G
Sbjct: 388 QLQANFQIMSMGSGL-WPLMM------------------------------------GFR 410
Query: 179 PAQFLMPPIPGATAVPGIQMPGFPGQPLPMSMLRTPL 215
P Q +PP+ T IQM G P Q PM M P
Sbjct: 411 PPQLPIPPLSAITDNRLIQMFGSPNQIPPMPMPHAPF 447
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 111/203 (54%), Gaps = 29/203 (14%)
Query: 30 TFNLKRRYEDTEGSAC----PCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRD 85
+ +LKR++ D + C ++ ++A R +++ R+ EVH ER+RRD
Sbjct: 296 SLSLKRKHSDIQDIDCRHSEDVEEESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRD 355
Query: 86 KINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGII 145
+IN+KMRALQELIPNCNKVDKASML+EAI+YLK+LQ QV +MSM +G MP +M P
Sbjct: 356 RINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYMPPVMFP---- 411
Query: 146 GMQQMHAVAPQMSHFP---PMGIGMDGRMQM------GAGCNPA-QFLMPPI--PGATAV 193
P M H+P MG+GM M + G+ N QF + + P A A+
Sbjct: 412 ---------PGMGHYPAAMAMGMGMPYAMGLPDLSRGGSSVNHGPQFQVSGMQQPVAMAI 462
Query: 194 PGIQMPGFPGQPLPMSMLRTPLG 216
P + GF M M ++ G
Sbjct: 463 PRVSGGGFFAGSATMEMNKSENG 485
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 95/148 (64%), Gaps = 14/148 (9%)
Query: 34 KRRYEDTEGSACPCDQYEKK---LERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKK 90
KR+ + E + C + E + + K +T + ++ R EVH + ER+RRD+IN+K
Sbjct: 694 KRKCSEREETECQSEDGEDESVDTKHKPITTGRGSTTKRSRAAEVHNQSERRRRDRINEK 753
Query: 91 MRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQ-- 148
MRALQELIPN NK DKASML+EAIDYLK LQ Q+ MMS+ TG+ +P M++P G+ MQ
Sbjct: 754 MRALQELIPNSNKTDKASMLDEAIDYLKILQLQLQMMSIRTGMTLPPMVMPPGLQHMQMP 813
Query: 149 QMHAVAPQMSHFPPMGIGMDGRMQMGAG 176
QM PQ++ P MG+ +QMG G
Sbjct: 814 QM----PQVAAMPSMGM-----VQMGLG 832
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 75/105 (71%), Gaps = 3/105 (2%)
Query: 35 RRYEDTEGSACPCDQYEKKLERKAVTVR---GSKSNRKKRTPEVHKRYERKRRDKINKKM 91
R + + + Q E L+ + V ++S+++ RT EVH ER+RRD+IN+KM
Sbjct: 296 RDSHNNQSAEWSASQDELDLDDELAGVHRRSAARSSKRSRTAEVHNLSERRRRDRINEKM 355
Query: 92 RALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMP 136
RALQELIPNCNK+DKASMLEEAI+YLKTLQ QV MMSMGTG+ +P
Sbjct: 356 RALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSMGTGMFVP 400
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 73/102 (71%), Gaps = 3/102 (2%)
Query: 35 RRYEDTEGSACPCDQYEKKLERKAVTVR---GSKSNRKKRTPEVHKRYERKRRDKINKKM 91
R + + + Q E L+ + V ++S+++ RT EVH ER+RRD+IN+KM
Sbjct: 296 RDSHNNQSAEWSASQDELDLDDELAGVHRRSAARSSKRSRTAEVHNLSERRRRDRINEKM 355
Query: 92 RALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGV 133
RALQELIPNCNK+DKASMLEEAI+YLKTLQ QV MMSMGTG+
Sbjct: 356 RALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSMGTGM 397
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 73/102 (71%), Gaps = 3/102 (2%)
Query: 35 RRYEDTEGSACPCDQYEKKLERKAVTVR---GSKSNRKKRTPEVHKRYERKRRDKINKKM 91
R + + + Q E L+ + V ++S+++ RT EVH ER+RRD+IN+KM
Sbjct: 175 RDSHNNQSAEWSASQDELDLDDELAGVHRRSAARSSKRSRTAEVHNLSERRRRDRINEKM 234
Query: 92 RALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGV 133
RALQELIPNCNK+DKASMLEEAI+YLKTLQ QV MMSMGTG+
Sbjct: 235 RALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSMGTGM 276
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 91/158 (57%), Gaps = 8/158 (5%)
Query: 7 IEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKK---LERKAVTVRG 63
I+ P +SS S P KR+ + E C + E + ++K T
Sbjct: 528 IQEPTITSSSGRYATSAEPPKEPVTGTKRKSSEREEPECQSEDMEDESVDTKQKPATTGR 587
Query: 64 SKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQ 123
+ ++ R EVH + ER+RRD+IN+KMRALQELIPN NK DKASML+EAI+YLK LQ Q
Sbjct: 588 VSTTKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQ 647
Query: 124 VMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFP 161
+ MMS+ TG+ +P M++P G+ MQ PQM P
Sbjct: 648 LQMMSIRTGMTLPPMVMPPGLQHMQM-----PQMGAIP 680
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 107/191 (56%), Gaps = 18/191 (9%)
Query: 30 TFNLKRRYEDTEGSACPCDQYEKKL---ERKAVTVRGSKSNRKKRTPEVHKRYERKRRDK 86
+ +LKR++ + + C + E++ ++A R +++ R+ EVH ER+RRD+
Sbjct: 299 SLSLKRKHSNIQDIDCHSEDVEEESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDR 358
Query: 87 INKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCM-PSMMLPTGII 145
IN+KMRALQELIPNCNKVDKASML+EAI+YLK+LQ QV +MSM +G + P++M P G +
Sbjct: 359 INEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYLPPAVMFPPG-M 417
Query: 146 GMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFLMPPIPGATAVPGIQMPGFPGQP 205
G A A M P +G+ + G+ N P Q+ G QP
Sbjct: 418 GHYPAAAAAMAMGMGMPYAMGLPDLSRGGSSVNHG-------------PQFQVSGMQQQP 464
Query: 206 LPMSMLRTPLG 216
+ M + R G
Sbjct: 465 VAMGIPRVSGG 475
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 73/102 (71%), Gaps = 3/102 (2%)
Query: 35 RRYEDTEGSACPCDQYEKKLERKAVTVR---GSKSNRKKRTPEVHKRYERKRRDKINKKM 91
R + + + Q E L+ + V ++S+++ RT EVH ER+RRD+IN+KM
Sbjct: 80 RDSHNNQSAEWSASQDELDLDDELAGVHRRSAARSSKRSRTAEVHNLSERRRRDRINEKM 139
Query: 92 RALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGV 133
RALQELIPNCNK+DKASMLEEAI+YLKTLQ QV MMSMGTG+
Sbjct: 140 RALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSMGTGM 181
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 88/136 (64%), Gaps = 17/136 (12%)
Query: 14 SSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVR----GSKSNRK 69
SS+CS N + + LKR + Q ++ L+ +A +R G++S ++
Sbjct: 215 SSVCS---DNGD---RSHQLKRSSHQA-AAEWSLSQDDEDLDDEAGGLRRSAAGARSTKR 267
Query: 70 KRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM-S 128
RT EVH ER+RRD+IN+KMRALQELIPNCNK+DKASMLEEAI+YLKTLQ QV MM S
Sbjct: 268 GRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSS 327
Query: 129 MG-----TGVCMPSMM 139
MG G+C+P M+
Sbjct: 328 MGPAAAAAGLCVPPML 343
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 84/133 (63%), Gaps = 13/133 (9%)
Query: 29 NTFNLKRRYEDTEGSACPCDQYEKK---LERKAVTVRGSKSNRKKRTPEVHKRYERKRRD 85
N + ++R DTE S P + E + L+RK + + R+ R EVH ER+RRD
Sbjct: 272 NRSSKRKRGLDTEDSESPSEDAESESLALDRK--PPQKLTTARRSRAAEVHNLSERRRRD 329
Query: 86 KINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCM-PSMMLPTGI 144
+IN+KMRALQELIP+CNK DKASML+EAI+YLKTLQ QV MM MG G+ P++M P
Sbjct: 330 RINEKMRALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQMMWMGGGMAAPPAVMFPG-- 387
Query: 145 IGMQQMHAVAPQM 157
MH PQM
Sbjct: 388 -----MHQYLPQM 395
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 106/191 (55%), Gaps = 18/191 (9%)
Query: 30 TFNLKRRYEDTEGSACPCDQYEKKL---ERKAVTVRGSKSNRKKRTPEVHKRYERKRRDK 86
+ +LKR++ + + C + E++ ++A R +++ R EVH ER+RRD+
Sbjct: 299 SLSLKRKHSNIQDIDCHSEDVEEESGDGRKEAGPSRTGLGSKRSRLAEVHNLSERRRRDR 358
Query: 87 INKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCM-PSMMLPTGII 145
IN+KMRALQELIPNCNKVDKASML+EAI+YLK+LQ QV +MSM +G + P++M P G +
Sbjct: 359 INEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYLPPAVMFPPG-M 417
Query: 146 GMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFLMPPIPGATAVPGIQMPGFPGQP 205
G A A M P +G+ + G+ N P Q+ G QP
Sbjct: 418 GHYPAAAAAMAMGMGMPYAMGLPDLSRGGSSVNHG-------------PQFQVSGMQQQP 464
Query: 206 LPMSMLRTPLG 216
+ M + R G
Sbjct: 465 VAMGIPRVSGG 475
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 82/127 (64%), Gaps = 9/127 (7%)
Query: 26 PACNTF---NLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERK 82
PAC + KR+ + + C + E + +RGS S ++ R EVH ER+
Sbjct: 268 PACPKLAVDDRKRKGRALDDTECQSEDVEYESADPKKQLRGSTSTKRSRAAEVHNLSERR 327
Query: 83 RRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPT 142
RRD+IN+KM+ALQELIP CNK DKASML+EAI+YLKTLQ QV MMSMG G+ MP MM P
Sbjct: 328 RRDRINEKMKALQELIPRCNKTDKASMLDEAIEYLKTLQLQVQMMSMGCGM-MP-MMFP- 384
Query: 143 GIIGMQQ 149
G+QQ
Sbjct: 385 ---GVQQ 388
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 84/138 (60%), Gaps = 17/138 (12%)
Query: 16 LCSLGASNNNPACNTFNL---KRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRT 72
L + S P T +L KR+ ++T+ S C Y K VRGS S ++ R
Sbjct: 251 LMKMIVSETEPVQRTTSLEDRKRKGKETDDSDYLC--YSTK------QVRGSTSTKRSRA 302
Query: 73 PEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTG 132
EVH ER+RRD+IN+KM+ALQELIP CNK DKASML+EAI+YLKTLQ QV MMSMG G
Sbjct: 303 AEVHNLSERRRRDRINEKMKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQMMSMGCG 362
Query: 133 VCMPSMMLPTGIIGMQQM 150
M MM P G QQ
Sbjct: 363 --MVPMMFP----GAQQF 374
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 85/138 (61%), Gaps = 13/138 (9%)
Query: 16 LCSLGASNNNPACNTFNL---KRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRT 72
L + S P T +L KR+ ++T+ S C K ++ VRGS S ++ R
Sbjct: 251 LMKMIVSETEPVQRTTSLEDRKRKGKETDDSDYLCYSTLKGSKQ----VRGSTSTKRSRA 306
Query: 73 PEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTG 132
EVH ER+RRD+IN+KM+ALQELIP CNK DKASML+EAI+YLKTLQ QV MMSMG G
Sbjct: 307 AEVHNLSERRRRDRINEKMKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQMMSMGCG 366
Query: 133 VCMPSMMLPTGIIGMQQM 150
M MM P G QQ
Sbjct: 367 --MVPMMFP----GAQQF 378
>gi|226492870|ref|NP_001146411.1| uncharacterized protein LOC100279991 [Zea mays]
gi|219887061|gb|ACL53905.1| unknown [Zea mays]
Length = 254
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 67/81 (82%), Gaps = 4/81 (4%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMML 140
++RRD+IN+KMRALQELIPNCNK+DKASML+EAI+YLKTLQ QV MMSMG+G+C+P M+L
Sbjct: 10 QRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMGSGLCIPPMLL 69
Query: 141 PTGIIGMQQMHAVAPQMSHFP 161
P + +Q + P +HFP
Sbjct: 70 PPAMQHLQ----IPPAAAHFP 86
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 79/123 (64%), Gaps = 13/123 (10%)
Query: 39 DTEGSACPCDQYEKK---LERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQ 95
DTE S P + E + L+RK + + R+ R EVH ER+RRD+IN+KMRALQ
Sbjct: 3 DTEDSESPSEDAESESLALDRK--PPQKLTTARRSRAAEVHNLSERRRRDRINEKMRALQ 60
Query: 96 ELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCM-PSMMLPTGIIGMQQMHAVA 154
ELIP+CNK DKASML+EAI+YLKTLQ QV MM MG G+ P++M P MH
Sbjct: 61 ELIPHCNKTDKASMLDEAIEYLKTLQMQVQMMWMGGGMAAPPAVMFPG-------MHQYL 113
Query: 155 PQM 157
PQM
Sbjct: 114 PQM 116
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 78/115 (67%), Gaps = 9/115 (7%)
Query: 35 RRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRAL 94
R +E++E + D +E +K V GS S ++ R EVH ER+RRD+IN+KM+AL
Sbjct: 230 REHEESEFQSEDVD-FESPEAKK--QVHGSTSTKRSRAAEVHNLSERRRRDRINEKMKAL 286
Query: 95 QELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQ 149
QELIP CNK DKASML+EAI+YLK+LQ QV MMSMG G M MM P G+QQ
Sbjct: 287 QELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGYG--MVPMMFP----GIQQ 335
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 78/124 (62%), Gaps = 8/124 (6%)
Query: 26 PACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRD 85
P + K R E+TE ++E +K RGS S ++ R EVH ER+RRD
Sbjct: 317 PPADDRKRKGREEETEYYHSEDVEFESADAKK--QARGSTSTKRSRAAEVHNLSERRRRD 374
Query: 86 KINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGII 145
+IN+KMRALQELIP CNK DKASML+EAI+YLK+LQ QV MMSM G M MM P
Sbjct: 375 RINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM--GCSMVPMMFP---- 428
Query: 146 GMQQ 149
G+QQ
Sbjct: 429 GIQQ 432
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 86/140 (61%), Gaps = 21/140 (15%)
Query: 34 KRRYEDTEGSACPCDQYEKK----LERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINK 89
KR+ DTE S P + E L RK + + R+ R EVH ER+RRD+IN+
Sbjct: 294 KRKRLDTEDSESPSEDAESGSAAMLARK--PPQKMTTARRSRAAEVHNLSERRRRDRINE 351
Query: 90 KMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGT-GVCM-PSMMLPTGIIGM 147
KMRALQELIP+CNK DKASML+EAI+YLK+LQ QV MM MG+ G+ P++M P G+
Sbjct: 352 KMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMMWMGSAGIAAPPAVMFP----GV 407
Query: 148 QQMHAVAPQMSHFPPMGIGM 167
Q + P MG+GM
Sbjct: 408 HQ---------YLPRMGVGM 418
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 86/140 (61%), Gaps = 21/140 (15%)
Query: 34 KRRYEDTEGSACPCDQYEKK----LERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINK 89
KR+ DTE S P + E L RK + + R+ R EVH ER+RRD+IN+
Sbjct: 294 KRKRLDTEDSESPSEDAESGSAAMLARK--PPQKMTTARRSRAAEVHNLSERRRRDRINE 351
Query: 90 KMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGT-GVCM-PSMMLPTGIIGM 147
KMRALQELIP+CNK DKASML+EAI+YLK+LQ QV MM MG+ G+ P++M P G+
Sbjct: 352 KMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMMWMGSAGIAAPPAVMFP----GV 407
Query: 148 QQMHAVAPQMSHFPPMGIGM 167
Q + P MG+GM
Sbjct: 408 HQ---------YLPRMGVGM 418
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 75/116 (64%), Gaps = 7/116 (6%)
Query: 34 KRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRA 93
KR+ + E C + + + E K V GS S ++ R EVH ER+RRD+IN+KM+A
Sbjct: 272 KRKGREAEEWECQSEDVDFESEAKK-QVCGSTSTKRSRAAEVHNLSERRRRDRINEKMKA 330
Query: 94 LQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQ 149
LQELIP CNK DKASML+EAI YLK+LQ QV MMSMG G M+P G+QQ
Sbjct: 331 LQELIPRCNKSDKASMLDEAISYLKSLQLQVQMMSMGCG------MVPVMFPGIQQ 380
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ R EVH ER+RRD+IN+KM+ALQELIP+CNK DKASML+EAI+YLKTLQ QV MM
Sbjct: 263 RRSRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQMM 322
Query: 128 SMGTGVCMPSMMLPTGIIGMQQ 149
MG+G+ P++M P GM Q
Sbjct: 323 WMGSGMAPPAVMFP----GMHQ 340
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 81/135 (60%), Gaps = 17/135 (12%)
Query: 34 KRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRA 93
K R D S ++E E K+ GSK R+ R EVH + ER+RRD+IN+KMR+
Sbjct: 200 KGRGRDDSDSRSEDAEFEATEETKSSRRHGSK--RRSRAAEVHNQSERRRRDRINEKMRS 257
Query: 94 LQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAV 153
LQELIP+CNK DKAS+L+EAI+YLK+LQ Q+ +M M TG M MM P G Q
Sbjct: 258 LQELIPHCNKADKASILDEAIEYLKSLQMQLQIMWMTTG--MAPMMFP----GAHQF--- 308
Query: 154 APQMSHFPPMGIGMD 168
PPM +GM+
Sbjct: 309 ------MPPMAMGMN 317
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 66/89 (74%), Gaps = 6/89 (6%)
Query: 61 VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
+RGS S+++ R EVH ER+RRD+IN+KMRALQELIP CNK DKASML+EAI+YLK+L
Sbjct: 357 IRGSMSSKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSL 416
Query: 121 QFQVMMMSMGTGVCMPSMMLPTGIIGMQQ 149
Q QV MMSM G M MM P G QQ
Sbjct: 417 QLQVQMMSM--GCSMVPMMFP----GFQQ 439
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 78/116 (67%), Gaps = 7/116 (6%)
Query: 43 SACPCDQYEKKLERKAVT---VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIP 99
S P + E E A T + + + +++R EVH ER+RRD+IN+KM+ALQELIP
Sbjct: 240 SGSPSEDVE--FESAAATCSPAQKTTTAKRRRAAEVHNLSERRRRDRINEKMKALQELIP 297
Query: 100 NCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIG--MQQMHAV 153
+CNK DKASML+EAI+YLK+LQ Q+ MM MG G+ P++M P + MQ+M AV
Sbjct: 298 HCNKTDKASMLDEAIEYLKSLQLQLQMMWMGGGMAPPAVMFPAAGVHQYMQRMGAV 353
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 78/116 (67%), Gaps = 7/116 (6%)
Query: 43 SACPCDQYEKKLERKAVT---VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIP 99
S P + E E A T + + + +++R EVH ER+RRD+IN+KM+ALQELIP
Sbjct: 240 SGSPSEDVE--FESAAATCSPAQKTTTAKRRRAAEVHNLSERRRRDRINEKMKALQELIP 297
Query: 100 NCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIG--MQQMHAV 153
+CNK DKASML+EAI+YLK+LQ Q+ MM MG G+ P++M P + MQ+M AV
Sbjct: 298 HCNKTDKASMLDEAIEYLKSLQLQLQMMWMGGGMAPPAVMFPAAGVHQYMQRMGAV 353
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 85/147 (57%), Gaps = 27/147 (18%)
Query: 35 RRYEDTEGSACPCDQYEKKLERKAVTVR-GSKSNRKKRTPEVHKRYERKRRDKINKKMRA 93
R D+ C+ E E K+ + R GSK R+ R EVH ER+RRD+IN+KMRA
Sbjct: 199 REDSDSRSEDAECEATE---ETKSSSRRYGSK--RRTRAAEVHNLSERRRRDRINEKMRA 253
Query: 94 LQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAV 153
LQELIP+CNK DKAS+L+EAI+YLK+LQ QV +M M TG M MM P G Q
Sbjct: 254 LQELIPHCNKTDKASILDEAIEYLKSLQMQVQIMWMTTG--MAPMMFP----GAHQF--- 304
Query: 154 APQMSHFPPMGIGMDGRMQMGAGCNPA 180
PPM +GM+ + C PA
Sbjct: 305 ------MPPMAVGMN------SACMPA 319
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 75/114 (65%), Gaps = 5/114 (4%)
Query: 29 NTFNLKRRYEDTEGSACPCDQYEKK---LERKAVTVRGSKSNRKKRTPEVHKRYERKRRD 85
N + ++R + TE S P + E + L RK + R+ R EVH ER+RRD
Sbjct: 275 NRSSKRKRLDTTEDSESPSEDAESESAALARKPPAKM--TTARRSRAAEVHNLSERRRRD 332
Query: 86 KINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMM 139
+IN+KMRALQELIP+CNK DKASML+EAI+YLK+LQ Q+ MM MG+G+ P M
Sbjct: 333 RINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWMGSGMAPPVMF 386
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 83/145 (57%), Gaps = 30/145 (20%)
Query: 36 RYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQ 95
R ED E C + K R+ GSK R+ R EVH ER+RRD+IN+KMRALQ
Sbjct: 194 RSEDAE---CEATEETKSSSRR----YGSK--RRTRAAEVHNLSERRRRDRINEKMRALQ 244
Query: 96 ELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAP 155
ELIP+CNK DKAS+L+EAI+YLK+LQ QV +M M TG M MM P G Q
Sbjct: 245 ELIPHCNKTDKASILDEAIEYLKSLQMQVQIMWMTTG--MAPMMFP----GAHQF----- 293
Query: 156 QMSHFPPMGIGMDGRMQMGAGCNPA 180
PPM +GM+ + C PA
Sbjct: 294 ----MPPMAVGMN------SACMPA 308
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 65/89 (73%), Gaps = 6/89 (6%)
Query: 61 VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
VRGS S ++ EVH ER+RRD+IN+KM+ALQELIP CNK DKASML+EAI+YLK+L
Sbjct: 266 VRGSTSTKRSHAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSL 325
Query: 121 QFQVMMMSMGTGVCMPSMMLPTGIIGMQQ 149
Q QV MMSMG G M+P G+QQ
Sbjct: 326 QLQVQMMSMGCG------MVPMIFPGIQQ 348
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 75/114 (65%), Gaps = 5/114 (4%)
Query: 29 NTFNLKRRYEDTEGSACPCDQYEKK---LERKAVTVRGSKSNRKKRTPEVHKRYERKRRD 85
N + ++R + TE S P + E + L RK + R+ R EVH ER+RRD
Sbjct: 275 NRSSKRKRLDTTEDSESPSEDAESESAALARKPPAKM--TTARRSRAAEVHNLSERRRRD 332
Query: 86 KINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMM 139
+IN+KMRALQELIP+CNK DKASML+EAI+YLK+LQ Q+ MM MG+G+ P M
Sbjct: 333 RINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWMGSGMAPPVMF 386
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 85/147 (57%), Gaps = 27/147 (18%)
Query: 35 RRYEDTEGSACPCDQYEKKLERKAVTVR-GSKSNRKKRTPEVHKRYERKRRDKINKKMRA 93
R D+ C+ E E K+ + R GSK R+ R EVH ER+RRD+IN+KMRA
Sbjct: 304 REDSDSRSEDAECEATE---ETKSSSRRYGSK--RRTRAAEVHNLSERRRRDRINEKMRA 358
Query: 94 LQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAV 153
LQELIP+CNK DKAS+L+EAI+YLK+LQ QV +M M TG M MM P G Q
Sbjct: 359 LQELIPHCNKTDKASILDEAIEYLKSLQMQVQIMWMTTG--MAPMMFP----GAHQF--- 409
Query: 154 APQMSHFPPMGIGMDGRMQMGAGCNPA 180
PPM +GM+ + C PA
Sbjct: 410 ------MPPMAVGMN------SACMPA 424
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 85/147 (57%), Gaps = 27/147 (18%)
Query: 35 RRYEDTEGSACPCDQYEKKLERKAVTVR-GSKSNRKKRTPEVHKRYERKRRDKINKKMRA 93
R D+ C+ E E K+ + R GSK R+ R EVH ER+RRD+IN+KMRA
Sbjct: 288 REDSDSRSEDAECEATE---ETKSSSRRYGSK--RRTRAAEVHNLSERRRRDRINEKMRA 342
Query: 94 LQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAV 153
LQELIP+CNK DKAS+L+EAI+YLK+LQ QV +M M TG M MM P G Q
Sbjct: 343 LQELIPHCNKTDKASILDEAIEYLKSLQMQVQIMWMTTG--MAPMMFP----GAHQF--- 393
Query: 154 APQMSHFPPMGIGMDGRMQMGAGCNPA 180
PPM +GM+ + C PA
Sbjct: 394 ------MPPMAVGMN------SACMPA 408
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 85/136 (62%), Gaps = 18/136 (13%)
Query: 64 SKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQ 123
++S+R+ R EVH + ER+RRD+IN+KMR LQ+LIPN NK DKASMLEEAI+YLK+LQFQ
Sbjct: 353 TRSSRRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQ 412
Query: 124 VMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFL 183
+ +M MG G M P G+Q + MG+GM G + + NP Q
Sbjct: 413 LQVMWMGGG------MTPVMFPGIQH---------YMSQMGMGM-GAPSLPSIHNPMQ-- 454
Query: 184 MPPIPGATAVPGIQMP 199
+P +P A+ +Q+P
Sbjct: 455 LPKVPHDQAMSVLQIP 470
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 65/96 (67%)
Query: 39 DTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELI 98
D E S C + E + S S R+ R EVH ER+RRD+IN+KMRALQELI
Sbjct: 2 DAEESECQSEDAELDSAVANKPAKRSGSTRRSRAAEVHNLSERRRRDRINEKMRALQELI 61
Query: 99 PNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVC 134
P+CNK DKASML+EAI+YLK+LQ Q+ +M MG+G+
Sbjct: 62 PHCNKTDKASMLDEAIEYLKSLQLQLQVMWMGSGIV 97
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 73/109 (66%), Gaps = 5/109 (4%)
Query: 34 KRRYEDTEGSACPCDQYEKK---LERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKK 90
++R + TE S P + E + L RK + R+ R EVH ER+RRD+IN+K
Sbjct: 261 RKRLDTTEDSESPSEDAESESAALARKPPAKM--TTARRSRAAEVHNLSERRRRDRINEK 318
Query: 91 MRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMM 139
MRALQELIP+CNK DKASML+EAI+YLK+LQ Q+ MM MG+G+ P M
Sbjct: 319 MRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWMGSGMAPPVMF 367
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/133 (48%), Positives = 81/133 (60%), Gaps = 25/133 (18%)
Query: 36 RYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQ 95
R ED E C+ E E K+ GSK R+ R EVH + ER+RRD+IN+KMR+LQ
Sbjct: 181 RSEDVE-----CEATE---ETKSSRRHGSK--RRSRAAEVHNQSERRRRDRINEKMRSLQ 230
Query: 96 ELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAP 155
ELIP+CNK DKAS+L+EAI+YLK+LQ QV +M M +G M MM P G Q
Sbjct: 231 ELIPHCNKADKASILDEAIEYLKSLQMQVQVMWMTSG--MAPMMFP----GSHQF----- 279
Query: 156 QMSHFPPMGIGMD 168
PPM +GM+
Sbjct: 280 ----MPPMAVGMN 288
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 66/89 (74%), Gaps = 6/89 (6%)
Query: 61 VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
VRGS + ++ R EVH ER+RRD+IN+KM+ALQELIP CNK DKASML+EAI+YLK+L
Sbjct: 298 VRGSATAKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSL 357
Query: 121 QFQVMMMSMGTGVCMPSMMLPTGIIGMQQ 149
Q QV MMSM G M MM P G+QQ
Sbjct: 358 QLQVQMMSM--GCSMVPMMYP----GVQQ 380
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 88/145 (60%), Gaps = 12/145 (8%)
Query: 30 TFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINK 89
+ K ED+ +Q E + E K TVR S S+R+ R VH + ER+RRD+IN+
Sbjct: 208 SLKAKTTDEDSASHGGSENQDEDR-ETKTETVR-SHSSRRTRAAAVHNQSERRRRDRINQ 265
Query: 90 KMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQ 149
KM+ALQ+L+PN +K DKASML+E I+YLK LQ QV MS+ MP MM+P +GMQQ
Sbjct: 266 KMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQAMSVRN---MPQMMMP---LGMQQ 319
Query: 150 MHAVAPQMSHFPPMGIGMDGRMQMG 174
QMS MG+G+ M MG
Sbjct: 320 Q----LQMSLLARMGMGVSLGMGMG 340
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/133 (48%), Positives = 81/133 (60%), Gaps = 25/133 (18%)
Query: 36 RYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQ 95
R ED E C+ E E K+ GSK R+ R EVH + ER+RRD+IN+KMR+LQ
Sbjct: 172 RSEDVE-----CEATE---ETKSSRRHGSK--RRSRAAEVHNQSERRRRDRINEKMRSLQ 221
Query: 96 ELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAP 155
ELIP+CNK DKAS+L+EAI+YLK+LQ QV +M M +G M MM P G Q
Sbjct: 222 ELIPHCNKADKASILDEAIEYLKSLQMQVQVMWMTSG--MAPMMFP----GSHQF----- 270
Query: 156 QMSHFPPMGIGMD 168
PPM +GM+
Sbjct: 271 ----MPPMAVGMN 279
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 83/134 (61%), Gaps = 18/134 (13%)
Query: 66 SNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVM 125
S+++ R EVH + ER+RRD+IN+KMR LQ+LIPN NK DKASMLEEAI+YLK+LQFQ+
Sbjct: 355 SSKRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQLQ 414
Query: 126 MMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFLMP 185
+M MG+G M P G+Q + MG+GM G + + NP Q +P
Sbjct: 415 VMWMGSG------MTPVMFPGIQH---------YMSQMGMGM-GAPSLPSIYNPMQ--LP 456
Query: 186 PIPGATAVPGIQMP 199
+P A+ QMP
Sbjct: 457 KVPHDQAMSVPQMP 470
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 65/89 (73%), Gaps = 6/89 (6%)
Query: 61 VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
VRGS + ++ R EVH ER+RRD+IN+KM+ALQELIP CNK DKASML+EAI+YLK+L
Sbjct: 260 VRGSATAKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSL 319
Query: 121 QFQVMMMSMGTGVCMPSMMLPTGIIGMQQ 149
Q QV MMSMG M+P G+QQ
Sbjct: 320 QLQVQMMSMGCS------MVPMMYPGVQQ 342
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 87/146 (59%), Gaps = 12/146 (8%)
Query: 14 SSLCSLGASNNNPACNTFNLKRRYEDTEGSACP-CDQYEKKLERKAVTVRGSKSNRKKRT 72
SS C A+++ + LKR ++ + S C D E E + T R R+ R
Sbjct: 87 SSFCGSNAASSAAGGHALLLKRGRDELDDSRCEDADDCEAVDETR--TSRRPAGKRRARA 144
Query: 73 PEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTG 132
EVH + ER+RRD+IN+KM+ALQEL+P+CNK DKAS+L+EAI+YLK+LQ QV +M M TG
Sbjct: 145 AEVHNQSERRRRDRINEKMKALQELVPHCNKSDKASILDEAIEYLKSLQLQVQIMWMTTG 204
Query: 133 VCMPSMMLPTGIIGMQQMHAVAPQMS 158
M MM P H + PQM+
Sbjct: 205 --MAPMMFPGA-------HQLMPQMA 221
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 72/110 (65%), Gaps = 4/110 (3%)
Query: 34 KRRYEDTEGSACPCDQYEKKLERKAVT--VRGSKSNRKKRTPEVHKRYERKRRDKINKKM 91
KR+ DTE S + E L+ A + S S R+ R EVH ER+RRD+IN+KM
Sbjct: 147 KRKTIDTEDSEYQSEAAELDLDSMAGNNPTKRSGSTRRSRAAEVHNLSERRRRDRINEKM 206
Query: 92 RALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLP 141
RALQELIP+C K DKASML+EAI+YLK+LQ Q+ +M MG G M M+ P
Sbjct: 207 RALQELIPHCYKTDKASMLDEAIEYLKSLQLQLQVMWMGGG--MAPMLFP 254
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 77/116 (66%), Gaps = 7/116 (6%)
Query: 43 SACPCDQYEKKLERKAVT---VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIP 99
S P + E E A T + + + +++R EVH ER+RRD+IN+KM+ALQELIP
Sbjct: 249 SGSPSEDVE--FESAAATCSPAQKTTTAKRRRAAEVHNLSERRRRDRINEKMKALQELIP 306
Query: 100 NCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIG--MQQMHAV 153
+CNK DKASML+EAI+YLK+LQ Q+ MM MG G+ ++M P + MQ+M AV
Sbjct: 307 HCNKTDKASMLDEAIEYLKSLQLQLQMMWMGGGMAPRAVMFPAAGVHQYMQRMGAV 362
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 71/113 (62%), Gaps = 21/113 (18%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ R EVH ER+RRD+IN+KMRALQELIP+CNK DKAS+L+E I+YLK+LQ QV +M
Sbjct: 227 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDETIEYLKSLQMQVQIM 286
Query: 128 SMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPA 180
M +G M MM P G Q PPM +GM+ +GC PA
Sbjct: 287 WMTSG--MAPMMFP----GAHQF---------MPPMALGMN------SGCIPA 318
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 70/103 (67%), Gaps = 15/103 (14%)
Query: 66 SNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVM 125
+ R+ R EVH ER+RRD+IN+K+RALQEL+P+CNK DKAS+L+EAI+YLK+LQ QV
Sbjct: 323 AKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQ 382
Query: 126 MMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMD 168
+M M TG+ MM P G Q+ PPMG+G++
Sbjct: 383 IMWMTTGIV--PMMFP----GTHQL---------MPPMGMGLN 410
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 84/132 (63%), Gaps = 19/132 (14%)
Query: 5 KCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVR-- 62
K E P+ SSSLCS NN+P +RR E+ +G Q E+ E ++ R
Sbjct: 162 KIPESPIASSSLCS----NNDPK------RRRREEDDGVDY---QTEENGEGESTNRRHA 208
Query: 63 --GSKSNRKK-RTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLK 118
G N+K+ R+ EVH ER+RRD+IN+KMRALQEL+P CNK VDKASMLEE I+YLK
Sbjct: 209 GKGRLMNKKRSRSSEVHNLSERRRRDRINEKMRALQELVPCCNKQVDKASMLEEVIEYLK 268
Query: 119 TLQFQVMMMSMG 130
+LQ QV MSMG
Sbjct: 269 SLQMQVQAMSMG 280
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 70/103 (67%), Gaps = 15/103 (14%)
Query: 66 SNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVM 125
+ R+ R EVH ER+RRD+IN+K+RALQEL+P+CNK DKAS+L+EAI+YLK+LQ QV
Sbjct: 399 AKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQ 458
Query: 126 MMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMD 168
+M M TG+ MM P G Q+ PPMG+G++
Sbjct: 459 IMWMTTGIV--PMMFP----GTHQL---------MPPMGMGLN 486
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 72/107 (67%), Gaps = 15/107 (14%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
R + + R+ R EVH ER+RRD+IN+KMRALQEL+P+CNK DKAS+L+EAI+YLK+LQ
Sbjct: 239 RPASNKRRTRAAEVHNMSERRRRDRINEKMRALQELVPHCNKTDKASILDEAIEYLKSLQ 298
Query: 122 FQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMD 168
QV +M M TG M MM+P G Q+ PPM +G++
Sbjct: 299 MQVQIMWMSTG--MAPMMIP----GAHQL---------MPPMTMGLN 330
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 70/103 (67%), Gaps = 15/103 (14%)
Query: 66 SNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVM 125
+ R+ R EVH ER+RRD+IN+K+RALQEL+P+CNK DKAS+L+EAI+YLK+LQ QV
Sbjct: 223 AKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQ 282
Query: 126 MMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMD 168
+M M TG+ MM P G Q+ PPMG+G++
Sbjct: 283 IMWMTTGIV--PMMFP----GTHQL---------MPPMGMGLN 310
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 70/103 (67%), Gaps = 15/103 (14%)
Query: 66 SNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVM 125
+ R+ R EVH ER+RRD+IN+K+RALQEL+P+CNK DKAS+L+EAI+YLK+LQ QV
Sbjct: 220 AKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQ 279
Query: 126 MMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMD 168
+M M TG+ MM P G Q+ PPMG+G++
Sbjct: 280 IMWMTTGIV--PMMFP----GTHQL---------MPPMGMGLN 307
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 70/103 (67%), Gaps = 15/103 (14%)
Query: 66 SNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVM 125
+ R+ R EVH ER+RRD+IN+K+RALQEL+P+CNK DKAS+L+EAI+YLK+LQ QV
Sbjct: 224 AKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQ 283
Query: 126 MMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMD 168
+M M TG+ MM P G Q+ PPMG+G++
Sbjct: 284 IMWMTTGIV--PMMFP----GTHQL---------MPPMGMGLN 311
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 67/103 (65%), Gaps = 4/103 (3%)
Query: 28 CNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKI 87
N + KR+ E A D+ E + E + S ++ R EVH ERKRRD+I
Sbjct: 245 TNVDDRKRK----EREATTTDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRI 300
Query: 88 NKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMG 130
N++M+ALQELIP CNK DKASML+EAI+Y+K+LQ Q+ MMSMG
Sbjct: 301 NERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMG 343
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 67/103 (65%), Gaps = 4/103 (3%)
Query: 28 CNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKI 87
N + KR+ E A D+ E + E + S ++ R EVH ERKRRD+I
Sbjct: 174 TNVDDRKRK----EREATTTDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRI 229
Query: 88 NKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMG 130
N++M+ALQELIP CNK DKASML+EAI+Y+K+LQ Q+ MMSMG
Sbjct: 230 NERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMG 272
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 67/103 (65%), Gaps = 4/103 (3%)
Query: 28 CNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKI 87
N + KR+ E A D+ E + E + S ++ R EVH ERKRRD+I
Sbjct: 245 TNVDDRKRK----EREATTTDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRI 300
Query: 88 NKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMG 130
N++M+ALQELIP CNK DKASML+EAI+Y+K+LQ Q+ MMSMG
Sbjct: 301 NERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMG 343
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 67/103 (65%), Gaps = 4/103 (3%)
Query: 28 CNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKI 87
N + KR+ E A D+ E + E + S ++ R EVH ERKRRD+I
Sbjct: 174 TNVDDRKRK----EREATTTDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRI 229
Query: 88 NKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMG 130
N++M+ALQELIP CNK DKASML+EAI+Y+K+LQ Q+ MMSMG
Sbjct: 230 NERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMG 272
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 68/103 (66%), Gaps = 7/103 (6%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
R + R+ R+ E H ER+RRDKIN+K++ALQEL+PNCNK DK SML+EAIDYLK+LQ
Sbjct: 9 RSTPPTRRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYLKSLQ 68
Query: 122 FQVMMMSMGTGVCMPSMMLPTGIIGMQQ-MHAVAPQMSHFPPM 163
Q+ M+ MG G M P + +QQ MH + + PP+
Sbjct: 69 LQLQMLVMGKG------MSPVVPLELQQYMHYITADPAQLPPL 105
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 65/89 (73%), Gaps = 7/89 (7%)
Query: 61 VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
+ GS S ++ R EVH ER+RRD+IN+KM+ALQELIP NK DKASML+EAIDYLK+L
Sbjct: 249 ISGS-STKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSL 307
Query: 121 QFQVMMMSMGTGVCMPSMMLPTGIIGMQQ 149
Q QV MMSMG G M MM P G+QQ
Sbjct: 308 QLQVQMMSMGCG--MVPMMFP----GIQQ 330
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 68/103 (66%), Gaps = 7/103 (6%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
R + R+ R+ E H ER+RRDKIN+K++ALQEL+PNCNK DK SML+EAIDYLK+LQ
Sbjct: 9 RSTPPARRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYLKSLQ 68
Query: 122 FQVMMMSMGTGVCMPSMMLPTGIIGMQQ-MHAVAPQMSHFPPM 163
Q+ M+ MG G M P + +QQ MH + + PP+
Sbjct: 69 LQLQMLVMGKG------MSPVVPLELQQYMHYITADPAQLPPL 105
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 81/141 (57%), Gaps = 27/141 (19%)
Query: 40 TEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIP 99
+E + C E K R+ G+K R+ R EVH ER+RRD+IN+KMRALQELIP
Sbjct: 299 SEDAECEEASEETKPSRR----YGTK--RRTRAAEVHNLSERRRRDRINEKMRALQELIP 352
Query: 100 NCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSH 159
+CNK DKAS+L+E I+YLK+LQ QV +M M +G M MM P G+ Q
Sbjct: 353 HCNKTDKASILDETIEYLKSLQMQVQIMWMTSG--MAPMMFP----GVHQF--------- 397
Query: 160 FPPMGIGMDGRMQMGAGCNPA 180
P M +GM+ GC PA
Sbjct: 398 IPQMALGMN------PGCIPA 412
>gi|297817562|ref|XP_002876664.1| hypothetical protein ARALYDRAFT_907786 [Arabidopsis lyrata subsp.
lyrata]
gi|297322502|gb|EFH52923.1| hypothetical protein ARALYDRAFT_907786 [Arabidopsis lyrata subsp.
lyrata]
Length = 368
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 75/129 (58%), Gaps = 19/129 (14%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
++KR E + ERK+R +NKKMR LQ+L+PN ++ D SML+EAI+Y+K LQ QV MM
Sbjct: 173 KRKRNAEAYNSPERKQRRDVNKKMRTLQDLLPNSHEDDNESMLDEAINYMKNLQLQVQMM 232
Query: 128 SMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFLMPPI 187
+MG PSMMLP G+ H+ M + M MQMGA QFL +
Sbjct: 233 TMGNRFVTPSMMLPLGL--------------HYSQMDLAMGMGMQMGA----QQFLPAHV 274
Query: 188 PGATAVPGI 196
GA +PGI
Sbjct: 275 LGA-GLPGI 282
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 70/105 (66%)
Query: 44 ACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK 103
+C ++ + E + TVR S+++ R EVH E++RR +IN+KM+ALQ LIPN NK
Sbjct: 98 SCDSEKGAEVAEVPSETVRPRNSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK 157
Query: 104 VDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQ 148
DKASML+EAI+YLK LQ QV M++M G+ + M LP + MQ
Sbjct: 158 TDKASMLDEAIEYLKQLQLQVQMLTMRNGLSLHPMCLPGVLQPMQ 202
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 81/140 (57%), Gaps = 12/140 (8%)
Query: 12 PSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKR 71
P++S S+GAS++N N + E EG E +E S+++ R
Sbjct: 127 PNASSTSVGASDHNE-----NDEFDCESEEG-------LEALVEELPTKPNPRSSSKRSR 174
Query: 72 TPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGT 131
EVH E++RR +IN+KM+ALQ LIPN NK DKASML+EAI+YLK LQ QV M+SM
Sbjct: 175 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRN 234
Query: 132 GVCMPSMMLPTGIIGMQQMH 151
G+ + M LP + +Q H
Sbjct: 235 GLSLHPMNLPGSLQYLQLSH 254
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 89/165 (53%), Gaps = 17/165 (10%)
Query: 34 KRRYEDTEGSACPCDQYEKK--LERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKM 91
K+ + DT+ C+ E + E + S ++ R EVH E++RR +IN+KM
Sbjct: 145 KKAHNDTDLDDLDCESEEGQEPSEEMSKPAPSRSSTKRSRAAEVHNLSEKRRRSRINEKM 204
Query: 92 RALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGV-----CMP----SMMLPT 142
+ALQ LIPN NK DKASML+EAI+YLK LQ QV M+SM +G+ CMP SM LP
Sbjct: 205 KALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMKSGINLAPMCMPGQLQSMQLPQ 264
Query: 143 GIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFLMPPI 187
+G + P MG+G+ Q + P+ F +P I
Sbjct: 265 ICMGFTTENGTLPIT-----MGMGLLPVNQQDSSSQPS-FDLPNI 303
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 118/254 (46%), Gaps = 48/254 (18%)
Query: 34 KRRYEDTEGSACPCDQYEKKLERKAVTVRGS----KSNRKKRTPEVHKRYERKRRDKINK 89
KR+ DTE S P + E E A+ R + R+ R EVH ER+RRD+IN+
Sbjct: 289 KRKRLDTEDSESPSEDAES--ESAAMLARKPPQKMTTARRSRAAEVHNLSERRRRDRINE 346
Query: 90 KMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGI----- 144
KMRALQELIP+CNK DKASML+EAI+YLK+LQ QV MM MG+G+ P ++ G+
Sbjct: 347 KMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMMWMGSGIAAPPAVMFPGVHQYLS 406
Query: 145 ---IGMQQMHAVAPQMSHFPPMGI---------------GMDGRMQMGAGCNPAQ----- 181
+GM A+ P M P M G G M A A+
Sbjct: 407 RMGVGMGPAAAM-PSMPRLPFMAAPQPVVPPNAQVNPVPGYRGHHHMPAAVGMAEPYGHY 465
Query: 182 ----FLMPPIPGATAVPGIQMPGFPGQPLPMSMLRTPLGLMHKT-----NPVAGVSRAAA 232
L PP P G+ G+ PL ++ +H + AG AA
Sbjct: 466 LGVNHLQPP-PSQHYAQGV---GYYPPPLGAKAVQQQAPELHHVPGPGASMPAGAGAAAP 521
Query: 233 SMEVKDSAPLTNPG 246
+ + +SAP PG
Sbjct: 522 GVLLPESAPSRGPG 535
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 81/140 (57%), Gaps = 12/140 (8%)
Query: 12 PSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKR 71
P++S S+GAS++N N + E EG E +E S+++ R
Sbjct: 127 PNASSTSVGASDHNE-----NDEFDCESEEG-------LEALVEELPTKPNPRSSSKRSR 174
Query: 72 TPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGT 131
EVH E++RR +IN+KM+ALQ LIPN NK DKASML+EAI+YLK LQ QV M+SM
Sbjct: 175 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRN 234
Query: 132 GVCMPSMMLPTGIIGMQQMH 151
G+ + M LP + +Q H
Sbjct: 235 GLSLHPMNLPGSLQYLQLSH 254
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 81/129 (62%), Gaps = 8/129 (6%)
Query: 41 EGSACPCDQYEKKLERKAV-----TVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQ 95
+G+ P + ++ +E ++ T + + +++R +VH ER+RRD+IN+KMRALQ
Sbjct: 202 DGAESPGEVMQQDVESESADVTCETAQKPATAKRRRAAQVHNLSERRRRDRINEKMRALQ 261
Query: 96 ELIPNCNKVDKASMLEEAIDYLKTLQFQV-MMMSMGTGVCMPSMMLPTGIIGMQQMHAVA 154
EL+P+CNK DKASML+EAI+YLK+LQ Q+ +M +MG + +M P G Q M +A
Sbjct: 262 ELVPHCNKTDKASMLDEAIEYLKSLQLQLQVMWAMGGRMAPAPVMFPAG--AHQYMQRMA 319
Query: 155 PQMSHFPPM 163
S PP
Sbjct: 320 TISSKMPPF 328
>gi|31043851|emb|CAD32238.1| BP-5 protein [Oryza sativa]
Length = 335
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 60/76 (78%), Gaps = 3/76 (3%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQEL--IPNCNKVDKASMLEEAIDYLKTLQFQVM 125
R+ R EVH ER+RRD+IN+KMRALQEL IP+CNK DKASML+EAI+YLK+LQ Q+
Sbjct: 163 RRSRAAEVHNLSERRRRDRINEKMRALQELELIPHCNKTDKASMLDEAIEYLKSLQLQLR 222
Query: 126 MMSMGTGVCMPSMMLP 141
+M MG+G+ P +M P
Sbjct: 223 VMWMGSGMA-PPLMFP 237
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 66/103 (64%), Gaps = 5/103 (4%)
Query: 28 CNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKI 87
N + KR+ + C E K R + T S ++ R EVH ERKRRD+I
Sbjct: 255 TNFDDKKRKEREATTEEAECRSEETKQARGSTT-----STKRSRAAEVHNLSERKRRDRI 309
Query: 88 NKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMG 130
N++M+ALQELIP CNK DKASML+EAI+Y+K+LQ Q+ +MSMG
Sbjct: 310 NERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQVMSMG 352
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 55/74 (74%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG +++ R EVH E++RR KIN+KM+ALQ LIPN NK DKASML+EAI+YLK LQ
Sbjct: 17 RGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQ 76
Query: 122 FQVMMMSMGTGVCM 135
QV M+SM GV +
Sbjct: 77 LQVQMLSMRNGVYL 90
>gi|297821098|ref|XP_002878432.1| hypothetical protein ARALYDRAFT_907776 [Arabidopsis lyrata subsp.
lyrata]
gi|297324270|gb|EFH54691.1| hypothetical protein ARALYDRAFT_907776 [Arabidopsis lyrata subsp.
lyrata]
Length = 347
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 86/162 (53%), Gaps = 22/162 (13%)
Query: 38 EDTEGS--ACPCDQYEKKLERKAVTVRGSKS-NRKKRTPEVHKRYERKRRDKINKKMRAL 94
ED+EGS E R V R K+ ++KR E + ERK+R INKKMR L
Sbjct: 119 EDSEGSMYLSSSLDDESDDARPQVPARTRKALVKRKRNAEANNSPERKQRRDINKKMRTL 178
Query: 95 QELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVA 154
Q+L+PN +K D SML+EAI Y+K L+ QV MM+MG PSMMLP G+
Sbjct: 179 QDLLPNSHKDDNESMLDEAIIYMKNLKLQVQMMTMGNRFVTPSMMLPLGL---------- 228
Query: 155 PQMSHFPPMGIGMDGRMQMGAGCNPAQFLMPPIPGATAVPGI 196
H+ MG+ M MQM A QFL + GA +PGI
Sbjct: 229 ----HYSQMGLAMGMGMQMDA----QQFLPAHVLGA-GLPGI 261
>gi|225446765|ref|XP_002278399.1| PREDICTED: transcription factor PIF5-like [Vitis vinifera]
Length = 531
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 75/115 (65%), Gaps = 2/115 (1%)
Query: 27 ACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDK 86
+ +T + KR+ + E S C + E + + + S S R+ R EVH ER+RRD+
Sbjct: 294 STDTNSHKRKGREAEESECQSEAAEHESAARNKASQRSGSTRRSRAAEVHNLSERRRRDR 353
Query: 87 INKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLP 141
IN+KM+ALQELIP+ NK DKASML+EAI+YLK+LQ Q+ +M MG GV MM P
Sbjct: 354 INEKMKALQELIPHSNKSDKASMLDEAIEYLKSLQLQLQLMWMGGGVA--PMMFP 406
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 70/118 (59%), Gaps = 8/118 (6%)
Query: 66 SNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVM 125
+ R+ R+ E H ER+RRD+IN+K++ALQEL+PNC K DK SML+EAIDYLK+LQ Q+
Sbjct: 14 TTRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQ 73
Query: 126 MMSMGTGVCMPSMMLPTGIIGMQQ-MHAVAPQMSHFPPMG-IGMDGRMQMGAGCNPAQ 181
M+ MG G M P +QQ MH + + PP+ G R NP Q
Sbjct: 74 MLVMGKG------MAPVVPPELQQYMHYITADPAQMPPLRPSGQQPRQFQITQANPQQ 125
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 72/117 (61%), Gaps = 5/117 (4%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
R + R+ R+ + H ER+RRD+IN+K+RALQEL+PNC K DK SML+EAIDYLK+LQ
Sbjct: 10 RATPPTRRSRSADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYLKSLQ 69
Query: 122 FQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSH--FPPMGIGMDGRMQMGAG 176
Q+ M+ MG G M ++ P Q MH + +H PP G++Q AG
Sbjct: 70 LQLQMLVMGKGGGMAPVVPPE---LQQYMHYITADPAHQMMPPPLRPSAGQLQPAAG 123
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 67/105 (63%), Gaps = 7/105 (6%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG +++ R EVH E++RR +IN+KM+ALQ LIPN NK DKASML+EAI+YLK LQ
Sbjct: 97 RGGSGSKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQ 156
Query: 122 FQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIG 166
QV M+SM GV + L + MQ A QM F +G+G
Sbjct: 157 LQVQMLSMRNGVYLNPSYLSGALEPMQ-----ASQM--FAALGVG 194
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 70/111 (63%), Gaps = 5/111 (4%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ R+ + H ER+RRD+IN+K+RALQEL+PNC K DK SML+EAIDYLK+LQ Q+ M+
Sbjct: 17 RRSRSADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 76
Query: 128 SMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSH--FPPMGIGMDGRMQMGAG 176
MG G M ++ P Q MH + +H PP G++Q AG
Sbjct: 77 VMGKGGGMAPVVPPE---LQQYMHYITADPAHQMMPPPLRPSAGQLQPAAG 124
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 70/111 (63%), Gaps = 9/111 (8%)
Query: 56 RKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAID 115
R A + + + R+ R+ + H ER+RRD+IN+K++ALQEL+PNC K DK SML+EAID
Sbjct: 5 RAARRMSSAPTTRRSRSADFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAID 64
Query: 116 YLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQ-MHAVA--PQMSHFPPM 163
YLK+LQ Q+ M+ MG G M P +QQ MH + P H PP+
Sbjct: 65 YLKSLQLQLQMLVMGKG------MAPVVPPELQQYMHYITADPAQMHMPPL 109
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 58/71 (81%)
Query: 64 SKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQ 123
+ + +++R +VH ER+RRD+IN+KM+ALQELIP+CNK DKASML+EAI+YLK+LQ Q
Sbjct: 244 TTTAKRRRAAQVHNLSERRRRDRINEKMKALQELIPHCNKADKASMLDEAIEYLKSLQLQ 303
Query: 124 VMMMSMGTGVC 134
+ ++ MG G+
Sbjct: 304 LQVVWMGGGIA 314
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 59/82 (71%)
Query: 63 GSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQF 122
G S+++ R EVH E++RR +IN+KM+ALQ LIPN NK DKASML+EAI+YLK LQ
Sbjct: 150 GRSSSKRSRAAEVHNMSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQL 209
Query: 123 QVMMMSMGTGVCMPSMMLPTGI 144
QV M+SM G+ + M LP +
Sbjct: 210 QVQMLSMRNGMSLHPMCLPGAL 231
>gi|302143504|emb|CBI22065.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 75/115 (65%), Gaps = 2/115 (1%)
Query: 27 ACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDK 86
+ +T + KR+ + E S C + E + + + S S R+ R EVH ER+RRD+
Sbjct: 294 STDTNSHKRKGREAEESECQSEAAEHESAARNKASQRSGSTRRSRAAEVHNLSERRRRDR 353
Query: 87 INKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLP 141
IN+KM+ALQELIP+ NK DKASML+EAI+YLK+LQ Q+ +M MG GV MM P
Sbjct: 354 INEKMKALQELIPHSNKSDKASMLDEAIEYLKSLQLQLQLMWMGGGVA--PMMFP 406
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG +++ R EVH E++RR KIN+KM+ALQ LIPN NK DKASML+EAI+YLK LQ
Sbjct: 94 RGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQ 153
Query: 122 FQVMMMSMGTGVCM-PSMM 139
QV M+SM GV + PS +
Sbjct: 154 LQVQMLSMRNGVYLNPSYL 172
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG +++ R EVH E++RR KIN+KM+ALQ LIPN NK DKASML+EAI+YLK LQ
Sbjct: 94 RGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQ 153
Query: 122 FQVMMMSMGTGVCM-PSMM 139
QV M+SM GV + PS +
Sbjct: 154 LQVQMLSMRNGVYLNPSYL 172
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 59/76 (77%)
Query: 63 GSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQF 122
G+ S+++ R EVH E++RR++IN+KM+ALQ LIPN NK DKASML+EAI+YLK LQ
Sbjct: 148 GTSSSKRSRAAEVHNLSEKRRRNRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKKLQL 207
Query: 123 QVMMMSMGTGVCMPSM 138
QV M+S +G+ + SM
Sbjct: 208 QVQMLSARSGIDISSM 223
>gi|449463597|ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
gi|449505798|ref|XP_004162571.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
Length = 550
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 84/135 (62%), Gaps = 15/135 (11%)
Query: 34 KRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRA 93
KR+ D E S C + E + T S S+R+ R EVH ER+RR++IN+KM+A
Sbjct: 314 KRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEKMKA 373
Query: 94 LQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQ-MHA 152
LQELIP+CNK DKASML+EAI+YLK+LQ Q+ +M MG+G M MM P G+Q M
Sbjct: 374 LQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVMWMGSG--MAPMMFP----GVQHYMSR 427
Query: 153 VAPQMSHFPPMGIGM 167
VA MG+GM
Sbjct: 428 VA--------MGMGM 434
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 71/117 (60%), Gaps = 8/117 (6%)
Query: 66 SNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVM 125
S+++ R+ EVH E++RR +IN+KM+ALQ LIPN NK DKASML+EAI+YLK LQ QV
Sbjct: 191 SSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 250
Query: 126 MMSMGTGV-----CMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGC 177
M+SM G+ C+P M+ P I + QM + F G+D GC
Sbjct: 251 MLSMRNGLSLQPMCLPGMLQP---IQLPQMGLDYDVGNAFLTSRRGIDTSSTRNEGC 304
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 73/116 (62%), Gaps = 13/116 (11%)
Query: 38 EDTEGSACPCDQYE------KKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKM 91
E+ C C+ E ++++ KA R S+++ R EVH E++RR +IN+KM
Sbjct: 124 ENETDHECDCESEEGLEALIEEVQTKAAPPR--SSSKRSRAAEVHNLSEKRRRSRINEKM 181
Query: 92 RALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGV-----CMPSMMLPT 142
+ALQ LIPN NK DKASML+EAI+YLK LQ QV M+S+ G+ C+P ++ PT
Sbjct: 182 KALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSLRNGIGLHPMCLPGVLQPT 237
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 71/117 (60%), Gaps = 8/117 (6%)
Query: 66 SNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVM 125
S+++ R+ EVH E++RR +IN+KM+ALQ LIPN NK DKASML+EAI+YLK LQ QV
Sbjct: 191 SSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 250
Query: 126 MMSMGTGV-----CMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGC 177
M+SM G+ C+P M+ P I + QM + F G+D GC
Sbjct: 251 MLSMRNGLSLQPMCLPGMLQP---IQLPQMGLDYDVGNAFLTSRRGIDTSSTRNEGC 304
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 65/95 (68%), Gaps = 13/95 (13%)
Query: 61 VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
+ GS S ++ R EVH ER+RRD+IN+KM+ALQELIP NK DKASML+EAIDYLK+L
Sbjct: 249 ISGS-STKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSL 307
Query: 121 QFQV------MMMSMGTGVCMPSMMLPTGIIGMQQ 149
Q QV MMSMG G M MM P G+QQ
Sbjct: 308 QLQVQRVQLMQMMSMGCG--MVPMMFP----GIQQ 336
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 47 CDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDK 106
CD EK +E +A T R S+++ R EVH E++RR +IN+KM+ALQ LIPN NK DK
Sbjct: 100 CDS-EKGVEVQANTARPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDK 158
Query: 107 ASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQ 148
ASML+EAI+YLK LQ QV M++M G+ + M LP + MQ
Sbjct: 159 ASMLDEAIEYLKQLQLQVQMLTMRNGLSLHPMCLPGALQPMQ 200
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 74/111 (66%), Gaps = 9/111 (8%)
Query: 41 EGSAC--PCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELI 98
E SAC + E++ + K V R S S R+ R +H + ER+RRD+IN+KM+ALQ+L+
Sbjct: 230 EDSACHVESENQEEEQDTKRVANR-SHSARRSRAAAIHNQSERRRRDRINEKMKALQKLV 288
Query: 99 PNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQ 149
PN +K DKASML+E I+YLK LQ QV MS+ + M M++P IGMQQ
Sbjct: 289 PNASKTDKASMLDEVIEYLKQLQAQVQFMSVRS---MQQMIMP---IGMQQ 333
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 11/103 (10%)
Query: 66 SNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVM 125
S+++ R+ EVH E++RR +IN+KM+ALQ LIPN NK DKASML+EAI+YLK LQ QV
Sbjct: 191 SSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 250
Query: 126 MMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMD 168
M+SM G+ + M LP G++ Q P MG+ D
Sbjct: 251 MLSMRNGLSLQPMCLP-GVL----------QPIQLPQMGLDFD 282
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 52 KKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLE 111
+++ KA +R S +++ R EVH E++RR +IN+KM+ALQ LIPN NK DKASML+
Sbjct: 122 EEVATKAAPLRSS--SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLD 179
Query: 112 EAIDYLKTLQFQVMMMSMGTGVCMPSMMLP 141
EAI+YLK LQ QV M+SM G+ + M LP
Sbjct: 180 EAIEYLKQLQLQVQMLSMRNGLSLHPMCLP 209
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 76/129 (58%), Gaps = 14/129 (10%)
Query: 39 DTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELI 98
D S C D +K+ + S S ++ R +H + ERKRRDKIN++M+ LQ+L+
Sbjct: 255 DENDSVCHSDDDDKQ----KANGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLV 310
Query: 99 PNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMS 158
PN +K DKASML+E I+YLK LQ QV MMS + + +MLP + MQQ QMS
Sbjct: 311 PNSSKTDKASMLDEVIEYLKQLQAQVQMMSR---MNIQPVMLP---MTMQQQL----QMS 360
Query: 159 HFPPMGIGM 167
PM +GM
Sbjct: 361 MLAPMNMGM 369
>gi|225898737|dbj|BAH30499.1| hypothetical protein [Arabidopsis thaliana]
Length = 363
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 72/129 (55%), Gaps = 19/129 (14%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
++KR E + ER +R+ INKKMR LQ L+PN +K D SML+EAI+Y+ LQ QV MM
Sbjct: 185 KRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQLQVQMM 244
Query: 128 SMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFLMPPI 187
+MG PSMM+P G ++ MG+ M MQMG QFL +
Sbjct: 245 TMGNRFVTPSMMMPLG--------------PNYSQMGLAMGVGMQMGE----QQFLPAHV 286
Query: 188 PGATAVPGI 196
GA +PGI
Sbjct: 287 LGA-GLPGI 294
>gi|42566136|ref|NP_191768.2| transcription factor PIF6 [Arabidopsis thaliana]
gi|193211499|gb|ACF16169.1| At3g62090 [Arabidopsis thaliana]
gi|332646785|gb|AEE80306.1| transcription factor PIF6 [Arabidopsis thaliana]
Length = 346
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 72/129 (55%), Gaps = 19/129 (14%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
++KR E + ER +R+ INKKMR LQ L+PN +K D SML+EAI+Y+ LQ QV MM
Sbjct: 168 KRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQLQVQMM 227
Query: 128 SMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFLMPPI 187
+MG PSMM+P G ++ MG+ M MQMG QFL +
Sbjct: 228 TMGNRFVTPSMMMPLG--------------PNYSQMGLAMGVGMQMGE----QQFLPAHV 269
Query: 188 PGATAVPGI 196
GA +PGI
Sbjct: 270 LGA-GLPGI 277
>gi|168039475|ref|XP_001772223.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676554|gb|EDQ63036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 56 RKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAID 115
+K VT RGS + R R EVH + ER+RRD+IN+KMRALQELIPN NK DKASMLEEAI+
Sbjct: 9 KKPVTGRGSTAKRS-RAAEVHNQSERRRRDRINEKMRALQELIPNSNKTDKASMLEEAIE 67
Query: 116 YLKTLQFQVMM 126
YLK LQ Q+ +
Sbjct: 68 YLKMLQLQLQV 78
>gi|449475553|ref|XP_004154488.1| PREDICTED: transcription factor bHLH82-like [Cucumis sativus]
Length = 173
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 57/79 (72%), Gaps = 8/79 (10%)
Query: 61 VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV--------DKASMLEE 112
+RGS S ++ R EVH ER+RRD+IN+KM+ALQELIP CNK+ DKASML+E
Sbjct: 48 LRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKLSSFTDSQTDKASMLDE 107
Query: 113 AIDYLKTLQFQVMMMSMGT 131
AI+YLKTLQ QV + + +
Sbjct: 108 AIEYLKTLQLQVQIFVLNS 126
>gi|145332927|ref|NP_001078329.1| transcription factor PIF6 [Arabidopsis thaliana]
gi|75301050|sp|Q8L5W7.1|PIF6_ARATH RecName: Full=Transcription factor PIF6; AltName: Full=Basic
helix-loop-helix protein 132; Short=AtbHLH132;
Short=bHLH 132; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 2; AltName: Full=Protein
PHYTOCHROME-INTERACTING FACTOR 6; AltName:
Full=Transcription factor EN 111; AltName: Full=bHLH
transcription factor bHLH132
gi|22535494|dbj|BAC10690.1| PIF3 like basic Helix Loop Helix protein 2 [Arabidopsis thaliana]
gi|332646786|gb|AEE80307.1| transcription factor PIF6 [Arabidopsis thaliana]
Length = 363
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 72/129 (55%), Gaps = 19/129 (14%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
++KR E + ER +R+ INKKMR LQ L+PN +K D SML+EAI+Y+ LQ QV MM
Sbjct: 185 KRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQLQVQMM 244
Query: 128 SMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFLMPPI 187
+MG PSMM+P G ++ MG+ M MQMG QFL +
Sbjct: 245 TMGNRFVTPSMMMPLG--------------PNYSQMGLAMGVGMQMGE----QQFLPAHV 286
Query: 188 PGATAVPGI 196
GA +PGI
Sbjct: 287 LGA-GLPGI 294
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 64/100 (64%), Gaps = 5/100 (5%)
Query: 54 LERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEA 113
LE A +++ R EVH E++RR +IN+KM+ALQ LIPN NK DKASML+EA
Sbjct: 129 LEAPAKPTTSRNPSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEA 188
Query: 114 IDYLKTLQFQVMMMSMGTG-----VCMPSMMLPTGIIGMQ 148
I+YLK LQ QV M++M G VC+P ++ P I M+
Sbjct: 189 IEYLKQLQLQVQMLTMRNGVSLYPVCLPGVLQPNEISHMR 228
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
Query: 33 LKRRYEDTEGSACPCDQYEKKLERKAVTVRG-SKSNRKKRTPEVHKRYERKRRDKINKKM 91
LK + D E SAC + +R+ T G S S R+ R +H + ER+RRD+IN+KM
Sbjct: 185 LKAKTTD-EDSACHGGSENQDEDRETKTQTGRSHSTRRSRAAAIHNQSERRRRDRINQKM 243
Query: 92 RALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
+ LQ+L+PN +K DKASML+E I+YLK LQ QV MMS+
Sbjct: 244 KTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMSV 281
>gi|297824267|ref|XP_002880016.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
gi|297325855|gb|EFH56275.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 76/113 (67%), Gaps = 7/113 (6%)
Query: 30 TFNLKRRY-EDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKIN 88
T + KR++ DT+ S D K ++ S SNR+ R EVH ER+RRD+IN
Sbjct: 220 TTDRKRKHIMDTDDSVSLSDVIGNKSNQR------SGSNRRSRAAEVHNLSERRRRDRIN 273
Query: 89 KKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLP 141
++M+ALQELIP+C+K DKAS+L+EAIDYLK+LQ Q+ +M MG+G+ MM P
Sbjct: 274 ERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVMWMGSGMAAAPMMFP 326
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 32 NLKRRYEDTEGSACPCDQYEKKLERKAVTVRG-SKSNRKKRTPEVHKRYERKRRDKINKK 90
+LK + D E SAC + +R+ T G S S R+ R +H + ER+RRD+IN+K
Sbjct: 146 SLKAKTTD-EDSACHGGSENQDEDRETKTQTGRSHSTRRSRAAAIHNQSERRRRDRINQK 204
Query: 91 MRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
M+ LQ+L+PN +K DKASML+E I+YLK LQ QV MMS+
Sbjct: 205 MKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMSV 243
>gi|115460586|ref|NP_001053893.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|38344324|emb|CAE02150.2| OSJNBa0058K23.6 [Oryza sativa Japonica Group]
gi|113565464|dbj|BAF15807.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|218195592|gb|EEC78019.1| hypothetical protein OsI_17435 [Oryza sativa Indica Group]
gi|222629570|gb|EEE61702.1| hypothetical protein OsJ_16185 [Oryza sativa Japonica Group]
Length = 181
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 60/91 (65%), Gaps = 7/91 (7%)
Query: 74 EVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGV 133
E H ER+RRD+IN+K++ALQEL+PNC K DK SML+EAIDYLK+LQ Q+ M+ MG G
Sbjct: 16 EFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLVMGKG- 74
Query: 134 CMPSMMLPTGIIGMQQ-MHAVAPQMSHFPPM 163
M P +QQ MH + S PP+
Sbjct: 75 -----MAPVVPPELQQYMHYITADPSQIPPI 100
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 56 RKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAID 115
+K VT RGS + R R EVH + ER+RRD+IN+KMRALQELIPN NK DKASML+EAI+
Sbjct: 9 KKPVTGRGSTAKRS-RAAEVHNQSERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIE 67
Query: 116 YLKTLQFQVMM 126
YLK LQ Q+ +
Sbjct: 68 YLKMLQLQLQV 78
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 63/91 (69%)
Query: 51 EKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASML 110
E +E AV G S+++ R EVH E++RR +IN+KM+ALQ LIPN NK DKASML
Sbjct: 124 EALVEEAAVKSGGRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASML 183
Query: 111 EEAIDYLKTLQFQVMMMSMGTGVCMPSMMLP 141
+EAI+YLK LQ QV M+SM G+ + M LP
Sbjct: 184 DEAIEYLKQLQLQVQMLSMRNGMSLHPMCLP 214
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 52/68 (76%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
++ R EVH E++RR KIN+KM+ALQ LIPN NK DKASML+EAI+YLK LQ QV M+
Sbjct: 102 KRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 161
Query: 128 SMGTGVCM 135
SM GV +
Sbjct: 162 SMRNGVYL 169
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 55/75 (73%)
Query: 74 EVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGV 133
EVH E++RR +IN+KM+ALQ LIPN NK DKASML+EAI+YLK LQ QV M+SM G+
Sbjct: 143 EVHNLSEKRRRGRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGL 202
Query: 134 CMPSMMLPTGIIGMQ 148
+ M P G+ +Q
Sbjct: 203 SLHPMCFPEGLQPLQ 217
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 55/75 (73%)
Query: 74 EVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGV 133
EVH E++RR +IN+KM+ALQ LIPN NK DKASML+EAI+YLK LQ QV M+SM G+
Sbjct: 147 EVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGL 206
Query: 134 CMPSMMLPTGIIGMQ 148
+ M P G+ +Q
Sbjct: 207 SLHPMCFPDGLQPLQ 221
>gi|356526934|ref|XP_003532070.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 266
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 95/183 (51%), Gaps = 24/183 (13%)
Query: 17 CSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVH 76
CSL N KR+ D E S + E K + + + S R+ R EVH
Sbjct: 21 CSLSTRNQGQ-------KRKGIDVEESEEQSEDTELKSALGNKSSQRTGSARRNRAAEVH 73
Query: 77 KRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMP 136
ER+RRD+IN+KM+ALQ+LIP+ +K DKASMLEEAI+YLK+LQ Q+ +M MG+G M
Sbjct: 74 NLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQLMWMGSG--MA 131
Query: 137 SMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFLMPPIPGATAVPGI 196
+M P G+Q + MG+GM NP Q +P +P +V
Sbjct: 132 PIMFP----GIQH---------YMSQMGMGMARPPFPPPIHNPMQ--LPRVPLDKSVSAS 176
Query: 197 QMP 199
Q P
Sbjct: 177 QTP 179
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 57/79 (72%)
Query: 63 GSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQF 122
G ++ R EVH E++RR KIN+KM+ALQ L+PN +K DKASML++AI+YLK LQ
Sbjct: 42 GRPRGKRARAAEVHNLSEKRRRCKINEKMKALQSLVPNSSKTDKASMLDDAIEYLKHLQL 101
Query: 123 QVMMMSMGTGVCMPSMMLP 141
QV M+SM GV PS+ LP
Sbjct: 102 QVQMLSMRNGVYRPSVNLP 120
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 90.9 bits (224), Expect = 5e-16, Method: Composition-based stats.
Identities = 43/59 (72%), Positives = 51/59 (86%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMM 126
++ R EVH ER+RRD+IN+KMRALQELIPNCNKVDKASML+EAI+YLKTLQ QV +
Sbjct: 1 KRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQV 59
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 52/68 (76%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
++ R EVH E++RR +IN+KM+ALQ LIPN NK DKASML+EAI+YLK LQ QV M+
Sbjct: 159 KRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 218
Query: 128 SMGTGVCM 135
SM GV +
Sbjct: 219 SMRNGVYL 226
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 54/67 (80%)
Query: 66 SNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVM 125
S+++ R EVH ER+RRD+IN+KM+ALQELIPN NK DKASML+EAI+YLK LQ Q+
Sbjct: 15 SSKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQ 74
Query: 126 MMSMGTG 132
++S G+
Sbjct: 75 VLSPGSS 81
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RGS S ++ R E+H ER+RR+KIN+KM+ LQELIP CNK K S L+ AI+Y+K LQ
Sbjct: 129 RGSTSRKRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKSTKVSTLDAAIEYVKWLQ 188
Query: 122 FQVMMMSMGTGVCMPSMM 139
Q+ M+ MG G+ MPSMM
Sbjct: 189 SQIQMILMGQGM-MPSMM 205
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 89/178 (50%), Gaps = 23/178 (12%)
Query: 48 DQYEKKLERKAVTV------RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNC 101
D+ +K+ E V + RGS S ++ R E+H ER+RR+KIN+KM+ LQELIP C
Sbjct: 1113 DRKQKEREETIVEIQGTEEARGSTSRKRSRAAEMHNLAERRRREKINEKMKTLQELIPRC 1172
Query: 102 NKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMP-------SMMLPTGIIGMQQMHAVA 154
NK K S LE+ I+Y+K+LQ Q+ MMSMG G+ P +P +GM +
Sbjct: 1173 NKSTKVSTLEDVIEYMKSLQMQIQMMSMGHGMMPPMMNAENMQQFMPHMAMGMNR----P 1228
Query: 155 PQMSHFPPMGIGMDGRMQMGAGCNPAQFLMPPIPGATAVPGIQMPGF------PGQPL 206
P HFP G M PA P A+ P +Q+P P QPL
Sbjct: 1229 PPFIHFPGTAFPRPGHMAGVGPSYPASRYPFPNTQASDPPRVQLPSLETDNPVPNQPL 1286
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RGS S ++ RT E+H ER+RR+KIN+ ++ LQELIP CNK K S L++AI+Y+K LQ
Sbjct: 575 RGSMSRKRSRTAEMHNLAERRRREKINENIKTLQELIPRCNKSTKVSTLDDAIEYVKWLQ 634
Query: 122 FQVMMMSMGTGVCMPSMML 140
Q+ MMS G G+ MP MM
Sbjct: 635 SQIQMMSTGQGM-MPPMMY 652
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 66/116 (56%), Gaps = 10/116 (8%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RGS S ++ R E+H ER+RR+KIN+KM+ LQELIP CNK K S LE+ I+Y+K+L+
Sbjct: 1563 RGSTSRKRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKSTKVSTLEDVIEYVKSLE 1622
Query: 122 FQ----VMMMSMGTGVCMPSMML-----PTGIIGMQQMHAVAPQMSHFPPMGIGMD 168
Q VM + T V + ML TG M M+ Q P M +GM+
Sbjct: 1623 MQIQHYVMNFRIMTEVLISESMLLCKMMSTGCSTMPMMYTSNTQ-QFMPHMAMGMN 1677
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 58/85 (68%)
Query: 71 RTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMG 130
R EVH E++RR +IN+KM+ALQ LIPN NK DKASML+EAI+YLK LQ QV M++M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMR 256
Query: 131 TGVCMPSMMLPTGIIGMQQMHAVAP 155
G+ + + LP + Q+ + P
Sbjct: 257 NGINLHPLCLPGTTLHPLQLSQIRP 281
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 54/67 (80%)
Query: 66 SNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVM 125
S+++ R EVH ER+RRD+IN+KM+ALQELIPN NK DKASML+EAI+YLK LQ Q+
Sbjct: 15 SSKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQ 74
Query: 126 MMSMGTG 132
++S G+
Sbjct: 75 VLSPGSS 81
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 58/85 (68%)
Query: 71 RTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMG 130
R EVH E++RR +IN+KM+ALQ LIPN NK DKASML+EAI+YLK LQ QV M++M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMR 256
Query: 131 TGVCMPSMMLPTGIIGMQQMHAVAP 155
G+ + + LP + Q+ + P
Sbjct: 257 NGINLHPLCLPGTTLHPLQLSQIRP 281
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 76/145 (52%), Gaps = 22/145 (15%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
++ R EVH E++RR +IN+KM+ALQ LIPN +K DKASML++AI+YLK LQ QV M+
Sbjct: 29 KRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQML 88
Query: 128 SMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFLMP-- 185
SM G+ +P P + G AP+ P M +D +P+ L P
Sbjct: 89 SMRNGLYLP----PVNLSG-------APEHLPIPQMSAALD--QNSAKASDPSVVLQPVN 135
Query: 186 -------PIPGATAVPGIQMPGFPG 203
P A+ + +PG P
Sbjct: 136 QTSGALLPFELASQHKPLFLPGVPN 160
>gi|294462676|gb|ADE76883.1| unknown [Picea sitchensis]
Length = 244
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 104/195 (53%), Gaps = 25/195 (12%)
Query: 91 MRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQM 150
MRALQELIP+CNK DKASML+EAI+YLKTLQ QV +MSMG G+ MP ++ P G+
Sbjct: 1 MRALQELIPHCNKSDKASMLDEAIEYLKTLQLQVQIMSMGGGMGMPPLVFPGGM-----Q 55
Query: 151 HAVAPQMSHFPPMGIGMDGRMQMG----AGCNPAQFLMPPIPGATAVPG--------IQM 198
H PQM+H PMG+G+ MG A + + P +A+PG + +
Sbjct: 56 HFQVPQMAHLSPMGMGIGMGYSMGMLDMAATSGRPVMSLPSMHVSALPGSAIHCQAALPL 115
Query: 199 PGFPGQPLPMSMLRTP----LGLMHKTNPVAGVSRAAASMEVKDSAP-LTNPGDSNQNVE 253
G PG +PMS L P GL T PV+G+ V SA T+ D QN
Sbjct: 116 SGMPGPSIPMSRLPGPGLQVSGLPVSTIPVSGLPGTTQPGLVSTSASGSTDLQDHMQNAN 175
Query: 254 I---NKRNVEHHKIR 265
+ K + HH+++
Sbjct: 176 VMGHYKHYMNHHQMQ 190
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 76/145 (52%), Gaps = 22/145 (15%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
++ R EVH E++RR +IN+KM+ALQ LIPN +K DKASML++AI+YLK LQ QV M+
Sbjct: 51 KRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQML 110
Query: 128 SMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFLMP-- 185
SM G+ +P P + G AP+ P M +D +P+ L P
Sbjct: 111 SMRNGLYLP----PVNLSG-------APEHLPIPQMSAALD--QNSAKASDPSVVLQPVN 157
Query: 186 -------PIPGATAVPGIQMPGFPG 203
P A+ + +PG P
Sbjct: 158 QTSGALLPFELASQHKPLFLPGVPN 182
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 76/114 (66%), Gaps = 6/114 (5%)
Query: 48 DQYEKKLERKAVT---VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV 104
D + + E VT + + +++R EVH ER+RRD+IN+KM+ALQELIP+CNK
Sbjct: 288 DAEDVEFESADVTCEPAHKTATAKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKT 347
Query: 105 DKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPS--MMLPTGIIG-MQQMHAVAP 155
DKASML+EAI+YLK+LQ Q+ MM MG G+ + ++ P G+ MQ+M A P
Sbjct: 348 DKASMLDEAIEYLKSLQLQLQMMWMGGGMAAAAAPVVFPAGVHQYMQRMVAAGP 401
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 81/159 (50%), Gaps = 22/159 (13%)
Query: 74 EVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGV 133
EVH E++RR +IN+KM+ALQ LIPN NK DKASML+EAI+YLK LQ QV M++M G+
Sbjct: 190 EVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGL 249
Query: 134 CMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGM-DGRMQM---GAGCNPA--QFLMPPI 187
+ + LP + Q + P G G +G + + G G PA + M
Sbjct: 250 SLHPIYLPGAL-----------QPTQLPQTGAGFAEGNLLLSNSGTGTLPANQEISMQTT 298
Query: 188 PGATAVPGIQMPGFPGQPLPMSMLRTPLGLMHKTNPVAG 226
T+ P I +P M+ T G H P G
Sbjct: 299 FDLTSQP-IAIPTMTN----MNNSDTSFGFEHSDQPHYG 332
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 61/87 (70%), Gaps = 3/87 (3%)
Query: 55 ERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAI 114
++K + S S ++ R +H + ERKRRDKIN++M+ LQ+L+PN +K DKASML+E I
Sbjct: 254 KKKRANGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVI 313
Query: 115 DYLKTLQFQVMMMSMGTGVCMPSMMLP 141
+YLK LQ QV MM+ + M SMMLP
Sbjct: 314 EYLKQLQAQVQMMNR---INMSSMMLP 337
>gi|218184992|gb|EEC67419.1| hypothetical protein OsI_34609 [Oryza sativa Indica Group]
Length = 465
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Query: 27 ACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDK 86
A ++ RR + G C D+ E + R +R S S ++ R +H ERKRRD+
Sbjct: 233 ASDSRCFSRRSQSQRGGMC--DEDEHVVIRGEGAMRSSISTKRSRAAAIHNESERKRRDR 290
Query: 87 INKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMM 126
IN+KM+ LQ+L+PN +K DKASML+E IDYLK LQ QV +
Sbjct: 291 INQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQVQV 330
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 76/145 (52%), Gaps = 22/145 (15%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
++ R EVH E++RR +IN+KM+ALQ LIPN +K DKASML++AI+YLK LQ QV M+
Sbjct: 51 KRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQML 110
Query: 128 SMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFLMP-- 185
SM G+ +P P + G AP+ P M +D +P+ L P
Sbjct: 111 SMRNGLYVP----PVNLSG-------APEHLPIPQMSAALD--QNSAKASDPSVVLQPVN 157
Query: 186 -------PIPGATAVPGIQMPGFPG 203
P A+ + +PG P
Sbjct: 158 QTSGALLPFELASQHKPLFLPGVPN 182
>gi|3522944|gb|AAC34226.1| hypothetical protein [Arabidopsis thaliana]
Length = 394
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 98/231 (42%), Gaps = 65/231 (28%)
Query: 3 AGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPC----DQYEKKLERKA 58
G+ E SSS S G S + C+ LKR+Y D E E +
Sbjct: 159 VGRSTELYFASSSKFSRGTSRDLSCCS---LKRKYGDIEEEESTYLSNNSDDESDDAKTQ 215
Query: 59 VTVRGSK-SNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYL 117
V R K ++KR+ EVHK YER DKAS+L+EAI Y+
Sbjct: 216 VHARTRKPVTKRKRSTEVHKLYERD----------------------DKASLLDEAIKYM 253
Query: 118 KTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGC 177
+TLQ QV MMSMG G+ P MLP G H+ PMG+G M MGA
Sbjct: 254 RTLQLQVQMMSMGNGLIRPPTMLPMG---------------HYSPMGLG----MHMGAAA 294
Query: 178 NPA---QFLMPPIPGATAVPGIQMPGFPGQ----PLPMSMLRTPLGLMHKT 221
P QFL P+ +Q GFPG P +S L P GL+ T
Sbjct: 295 TPTSIPQFL--PM-------NVQATGFPGMNNAPPQMLSFLNHPSGLIPNT 336
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 52/71 (73%)
Query: 74 EVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGV 133
EVH E++RR +IN+KM+ALQ LIPN NK DKASML+EAI+YLK LQ QV M+S+ G+
Sbjct: 114 EVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSLRNGL 173
Query: 134 CMPSMMLPTGI 144
+ M G+
Sbjct: 174 SLHPMYFHEGL 184
>gi|42567227|ref|NP_194608.3| transcription factor bHLH23 [Arabidopsis thaliana]
gi|75313939|sp|Q9SVU6.1|BH023_ARATH RecName: Full=Transcription factor bHLH23; AltName: Full=Basic
helix-loop-helix protein 23; Short=AtbHLH23; Short=bHLH
23; AltName: Full=Transcription factor EN 107; AltName:
Full=bHLH transcription factor bHLH023
gi|4218119|emb|CAA22973.1| putative protein [Arabidopsis thaliana]
gi|7269734|emb|CAB81467.1| putative protein [Arabidopsis thaliana]
gi|225898825|dbj|BAH30543.1| hypothetical protein [Arabidopsis thaliana]
gi|332660145|gb|AEE85545.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 413
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 61 VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
R S S+++ R +HK ER+RR KIN+ M+ALQEL+P C K D++SML++ I+Y+K+L
Sbjct: 267 ARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSL 326
Query: 121 QFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPA 180
Q Q+ M SMG V +P MM G I Q M +A M+ PP I + M G P
Sbjct: 327 QSQIQMFSMG-HVMIPPMMY-AGNIQQQYMPHMAMGMNR-PPAFIPFPRQAHMAEGVGPV 383
Query: 181 QFL 183
Sbjct: 384 DLF 386
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 49/62 (79%)
Query: 74 EVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGV 133
EVH E++RR KIN+KM+ALQ LIPN NK DKASML+EAI+YLK LQ QV M+SM GV
Sbjct: 86 EVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGV 145
Query: 134 CM 135
+
Sbjct: 146 YL 147
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 48/61 (78%)
Query: 74 EVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGV 133
E H ER+RRD+IN+K++ALQEL+PNC K DK SML+EAIDYLK+LQ Q+ M+ MG G
Sbjct: 20 EFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQIQLQMLVMGKGT 79
Query: 134 C 134
Sbjct: 80 A 80
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 79/129 (61%), Gaps = 4/129 (3%)
Query: 13 SSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRT 72
S+S+ SL +++ C T D+ + P + + + ++K + S S ++ R
Sbjct: 213 STSINSLENTSSAKHC-TKTTTVDDHDSVSHSKPVGEDQDEGKKKRANGKSSVSTKRSRA 271
Query: 73 PEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTG 132
+H + ERKRRDKIN++M+ LQ+L+PN +K DKASML+E I+YLK LQ Q+ M++
Sbjct: 272 AAIHNQSERKRRDKINQRMKTLQKLVPNSSKSDKASMLDEVIEYLKQLQAQLQMINR--- 328
Query: 133 VCMPSMMLP 141
+ M SMMLP
Sbjct: 329 INMSSMMLP 337
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 53/69 (76%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
++ R EVH E++RR +IN+KM+ALQ LIPN +K DKASML++AI+YLK LQ QV M+
Sbjct: 43 KRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKQLQLQVQML 102
Query: 128 SMGTGVCMP 136
SM G+ +P
Sbjct: 103 SMRNGLYLP 111
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 53/76 (69%), Gaps = 6/76 (7%)
Query: 71 RTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMG 130
R EVH E++RR +IN+KM+ALQ LIPN NK DKASML+EAI+YLK LQ QV M++M
Sbjct: 176 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMR 235
Query: 131 TGV------CMPSMML 140
G+ C+P L
Sbjct: 236 NGINLHHPLCLPGTTL 251
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Query: 49 QYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKAS 108
Q E + E+KA + S S ++ R +H + ERKRRDKIN++M+ LQ+L+PN +K DKAS
Sbjct: 192 QMEDEEEKKAGG-KSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKAS 250
Query: 109 MLEEAIDYLKTLQFQVMMMS 128
ML+E I+YLK LQ QV MMS
Sbjct: 251 MLDEVIEYLKQLQAQVSMMS 270
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 57/90 (63%)
Query: 39 DTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELI 98
D S C + E K + S S ++ R +H + ERKRRDKIN++M+ LQ+L+
Sbjct: 181 DDHDSVCHSRPQMEDEEEKKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLV 240
Query: 99 PNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
PN +K DKASML+E I+YLK LQ QV MMS
Sbjct: 241 PNSSKTDKASMLDEVIEYLKQLQAQVSMMS 270
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 53/69 (76%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
++ R EVH E++RR +IN+KM+ALQ LIPN +K DKASML++AI+YLK LQ QV M+
Sbjct: 42 KRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQML 101
Query: 128 SMGTGVCMP 136
SM G+ +P
Sbjct: 102 SMRNGLYLP 110
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 53/69 (76%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
++ R EVH E++RR +IN+KM+ALQ LIPN +K DKASML++AI+YLK LQ QV M+
Sbjct: 44 KRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQML 103
Query: 128 SMGTGVCMP 136
SM G+ +P
Sbjct: 104 SMRNGLYLP 112
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 53/69 (76%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
++ R EVH E++RR +IN+KM+ALQ LIPN +K DKASML++AI+YLK LQ QV M+
Sbjct: 42 KRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQML 101
Query: 128 SMGTGVCMP 136
SM G+ +P
Sbjct: 102 SMRNGLYLP 110
>gi|357143431|ref|XP_003572919.1| PREDICTED: transcription factor SPATULA-like [Brachypodium
distachyon]
Length = 312
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 54/70 (77%)
Query: 74 EVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGV 133
EVH E++RR +IN+KM+ALQ L+PN +K DKASML++AI+YLK LQ QV M+SM G+
Sbjct: 68 EVHNLSEKRRRCRINEKMKALQSLVPNSSKTDKASMLDDAIEYLKQLQLQVQMLSMRNGL 127
Query: 134 CMPSMMLPTG 143
+P + LP G
Sbjct: 128 YLPQVNLPVG 137
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 57/90 (63%)
Query: 39 DTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELI 98
D S C + E K + S S ++ R +H + ERKRRDKIN++M+ LQ+L+
Sbjct: 183 DDHDSVCHSRPQMEDEEEKKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKILQKLV 242
Query: 99 PNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
PN +K DKASML+E I+YLK LQ QV MMS
Sbjct: 243 PNSSKTDKASMLDEVIEYLKQLQAQVSMMS 272
>gi|356567480|ref|XP_003551947.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 397
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 76/134 (56%), Gaps = 9/134 (6%)
Query: 17 CSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVH 76
CSL N +++ E +E + K +R + R+ R EVH
Sbjct: 154 CSLSTRNQGQKRKGIDVEESEEQSEDTELKSALGNKSSQRAGLA-------RRNRAAEVH 206
Query: 77 KRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMP 136
ER+RRD+IN+KM+ALQ+LIP+ +K DKASMLEEAI+YLK+LQ Q+ +M MG+G M
Sbjct: 207 NLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQLMWMGSG--MA 264
Query: 137 SMMLPTGIIGMQQM 150
+M P M QM
Sbjct: 265 PIMFPGIQHYMSQM 278
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 71/113 (62%), Gaps = 11/113 (9%)
Query: 43 SACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCN 102
S C D+ ++K E + S S ++ R +H + ERKRRDKIN++M+ LQ+L+PN N
Sbjct: 269 SVCHKDEGDRKKE----NAKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSN 324
Query: 103 KVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAP 155
K DKASML+E I+YLK LQ QV MMS MMLP I MQQ ++AP
Sbjct: 325 KTDKASMLDEVIEYLKQLQAQVQMMSR----MNMPMMLP---IAMQQQLSMAP 370
>gi|90399331|emb|CAJ86131.1| H0313F03.15 [Oryza sativa Indica Group]
Length = 307
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 61/96 (63%), Gaps = 7/96 (7%)
Query: 69 KKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
K R+ H ++RRD+IN+K++ALQEL+PNC K DK SML+EAIDYLK+LQ Q+ M+
Sbjct: 137 KLRSVIAHLVSRKRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLV 196
Query: 129 MGTGVCMPSMMLPTGIIGMQQ-MHAVAPQMSHFPPM 163
MG G M P +QQ MH + S PP+
Sbjct: 197 MGKG------MAPVVPPELQQYMHYITADPSQIPPI 226
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 54/78 (69%)
Query: 66 SNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVM 125
S+++ R E H E++RR KIN+K++ALQ LIPN NK DKASML+EAI+YLK LQ QV
Sbjct: 86 SSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 145
Query: 126 MMSMGTGVCMPSMMLPTG 143
M+ + G + M L G
Sbjct: 146 MLMVRNGYSLHPMSLSGG 163
>gi|312283297|dbj|BAJ34514.1| unnamed protein product [Thellungiella halophila]
Length = 448
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 90/154 (58%), Gaps = 23/154 (14%)
Query: 30 TFNLKRRY--EDTEGSACPCDQYEKKLERKAVTVRGSK---SNRKKRTPEVHKRYERKRR 84
T + KR++ + + S D +E +A+ + S+ S R+ R EVH ER+RR
Sbjct: 214 TIDRKRKHVMDTDQESVSQSDVRLMSMEDQAIGNKSSQRSGSTRRSRAAEVHNLSERRRR 273
Query: 85 DKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPS------- 137
D+IN++M+ALQELIP+C+K DKAS+L+EAIDYLK+LQ Q+ +M MG+G+ +
Sbjct: 274 DRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQMQLQVMWMGSGMAAAAAAAASTP 333
Query: 138 MMLPTGIIGMQQMHAVAP-------QMSHFPPMG 164
MM P G+QQ + Q+S FP M
Sbjct: 334 MMFP----GVQQSPYINQMAMQSQMQLSQFPVMN 363
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 56/82 (68%), Gaps = 4/82 (4%)
Query: 43 SACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCN 102
S C D+ ++K E + S S ++ R +H + ERKRRDKIN++M+ LQ+L+PN N
Sbjct: 269 SVCHKDEGDRKKE----NAKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSN 324
Query: 103 KVDKASMLEEAIDYLKTLQFQV 124
K DKASML+E I+YLK LQ QV
Sbjct: 325 KTDKASMLDEVIEYLKQLQAQV 346
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 80/155 (51%), Gaps = 15/155 (9%)
Query: 2 DAGKCIEPPVPSSSLCSL----------GASNNNPACNTFNLKRRYEDTEGSACPCDQYE 51
D G + PP S L S ++ P N + + + G A Y
Sbjct: 5 DVGDRLPPPSSSDELSSFLRQILSRTPTAQPSSPPKRNVSSAETFFPSVSGGAVSIAGYG 64
Query: 52 KKLERKAVTVR--GSKS-NRKKRT--PEVHKRYERKRRDKINKKMRALQELIPNCNKVDK 106
E+ A + G+K N KRT + H E++RR KIN+KM+ALQ+LIPN NK DK
Sbjct: 65 VAQEKYAFENKRNGAKQRNSLKRTIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDK 124
Query: 107 ASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLP 141
ASML+EAI+YLK LQ QV +++ G+ + M LP
Sbjct: 125 ASMLDEAIEYLKQLQLQVQTLAVMNGLGLNPMRLP 159
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 48 DQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKA 107
D+Y + +R R S ++ + H E+KRR KIN+KM+ALQ+LIPN NK DKA
Sbjct: 72 DKYAFEHKRSGAKQRNSL--KRSIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKA 129
Query: 108 SMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLP 141
SML+EAI+YLK LQ QV +++ G+ + M LP
Sbjct: 130 SMLDEAIEYLKQLQLQVQTLAVMNGLGLNPMRLP 163
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 48 DQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKA 107
D+Y + +R R S ++ + H E+KRR KIN+KM+ALQ+LIPN NK DKA
Sbjct: 72 DKYAFEHKRSGAKQRNSL--KRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKA 129
Query: 108 SMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLP 141
SML+EAI+YLK LQ QV +++ G+ + M LP
Sbjct: 130 SMLDEAIEYLKQLQLQVQTLAVMNGLGLNPMRLP 163
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 48 DQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKA 107
D+Y + +R R S ++ + H E+KRR KIN+KM+ALQ+LIPN NK DKA
Sbjct: 72 DKYAFEHKRSGAKQRNSL--KRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKA 129
Query: 108 SMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLP 141
SML+EAI+YLK LQ QV +++ G+ + M LP
Sbjct: 130 SMLDEAIEYLKQLQLQVQTLAVMNGLGLNPMRLP 163
>gi|297820750|ref|XP_002878258.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
gi|297324096|gb|EFH54517.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
Length = 439
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 58/70 (82%)
Query: 64 SKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQ 123
S S R+ R EVH ER+RRD+IN++M+ALQELIP+C+K DKAS+L+EAIDYLK+LQ Q
Sbjct: 247 SGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQMQ 306
Query: 124 VMMMSMGTGV 133
+ +M MG+G+
Sbjct: 307 LQVMWMGSGM 316
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 48/59 (81%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMM 126
++ R EVH ER+RRD+IN+KMRALQELIPN NK DKASML+EAI+YLK LQ Q+ +
Sbjct: 14 KRSRAAEVHNLSERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQV 72
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 51/63 (80%)
Query: 65 KSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQV 124
K +++ R EVH ERKRRD+IN++M+ALQELIPN NK DKASML+EAI+YLK LQ Q+
Sbjct: 2 KGSKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQHQL 61
Query: 125 MMM 127
++
Sbjct: 62 QVV 64
>gi|357441955|ref|XP_003591255.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480303|gb|AES61506.1| Transcription factor PIF3 [Medicago truncatula]
Length = 555
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 3 AGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLE--RKAVT 60
A K +E V SSS+CS ++ +LKR+ DTE S C + E + +K
Sbjct: 398 ADKGMEVAVASSSVCSGNGADRGSDDPNRDLKRKSRDTEDSECHSEDVEDESVGVKKGAA 457
Query: 61 VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV 104
RG +++ R EVH ER+RRD+IN+KMRALQELIPNCNKV
Sbjct: 458 GRGVAGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV 501
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 84.0 bits (206), Expect = 6e-14, Method: Composition-based stats.
Identities = 43/81 (53%), Positives = 57/81 (70%), Gaps = 6/81 (7%)
Query: 46 PCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD 105
P D ++K R+ V+ + R +VH ERKRRDKINK+MR L+ELIPNCNK D
Sbjct: 732 PEDVVKEKPAREGTGVK------RSRNAQVHNLCERKRRDKINKRMRILKELIPNCNKTD 785
Query: 106 KASMLEEAIDYLKTLQFQVMM 126
KASML++AI+YLKTL+ Q+ +
Sbjct: 786 KASMLDDAIEYLKTLKLQIQV 806
>gi|30694924|ref|NP_191465.3| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315658|ref|NP_001030889.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315685|ref|NP_001030890.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|75297820|sp|Q84LH8.1|PIF5_ARATH RecName: Full=Transcription factor PIF5; AltName: Full=Basic
helix-loop-helix protein 65; Short=AtbHLH65; Short=bHLH
65; AltName: Full=Phytochrome interacting factor-like 6;
AltName: Full=Phytochrome-interacting factor 5; AltName:
Full=Transcription factor EN 103; AltName: Full=bHLH
transcription factor bHLH065
gi|28372349|dbj|BAC56978.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|222424174|dbj|BAH20046.1| AT3G59060 [Arabidopsis thaliana]
gi|225898729|dbj|BAH30495.1| hypothetical protein [Arabidopsis thaliana]
gi|332646348|gb|AEE79869.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646349|gb|AEE79870.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646350|gb|AEE79871.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 444
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 58/70 (82%)
Query: 64 SKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQ 123
S S R+ R EVH ER+RRD+IN++M+ALQELIP+C++ DKAS+L+EAIDYLK+LQ Q
Sbjct: 249 SGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQ 308
Query: 124 VMMMSMGTGV 133
+ +M MG+G+
Sbjct: 309 LQVMWMGSGM 318
>gi|30694919|ref|NP_851021.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|7529749|emb|CAB86934.1| putative protein [Arabidopsis thaliana]
gi|332646347|gb|AEE79868.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 442
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 58/70 (82%)
Query: 64 SKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQ 123
S S R+ R EVH ER+RRD+IN++M+ALQELIP+C++ DKAS+L+EAIDYLK+LQ Q
Sbjct: 249 SGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQ 308
Query: 124 VMMMSMGTGV 133
+ +M MG+G+
Sbjct: 309 LQVMWMGSGM 318
>gi|20127070|gb|AAM10954.1|AF488598_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 442
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 58/70 (82%)
Query: 64 SKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQ 123
S S R+ R EVH ER+RRD+IN++M+ALQELIP+C++ DKAS+L+EAIDYLK+LQ Q
Sbjct: 249 SGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQ 308
Query: 124 VMMMSMGTGV 133
+ +M MG+G+
Sbjct: 309 LQVMWMGSGM 318
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 51/63 (80%)
Query: 65 KSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQV 124
K +++ R EVH ERKRRD+IN++M+ALQELIPN NK DKASML+EAI+YLK LQ Q+
Sbjct: 2 KGSKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQHQL 61
Query: 125 MMM 127
++
Sbjct: 62 QVV 64
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Query: 63 GSKSNRKKRT--PEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
G + N KR + H E++RR KIN+KM+ALQ+LIPN NK DKASML+EAI+YLK L
Sbjct: 82 GRQRNSLKRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQL 141
Query: 121 QFQVMMMSMGTGVCMPSMMLP 141
Q QV +++ G+ + M LP
Sbjct: 142 QLQVQTLAVMNGLGLNPMQLP 162
>gi|240256101|ref|NP_194609.5| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|378405153|sp|Q9SVU7.2|BH056_ARATH RecName: Full=Putative transcription factor bHLH056; AltName:
Full=Basic helix-loop-helix protein 56; Short=AtbHLH56;
Short=bHLH 56; AltName: Full=Transcription factor EN
106; AltName: Full=bHLH transcription factor bHLH056
gi|332660146|gb|AEE85546.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 445
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 63/101 (62%), Gaps = 11/101 (10%)
Query: 51 EKKLERKAVT-----VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD 105
E KL+ + T RGS S ++ RT E+H ER+RR+KIN+KM+ LQ+LIP CNK
Sbjct: 230 ESKLKAREETHGTEEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKST 289
Query: 106 KASMLEEAIDYLKTLQFQV------MMMSMGTGVCMPSMML 140
K S L++AI+Y+K+LQ Q+ MM + T MP M +
Sbjct: 290 KVSTLDDAIEYVKSLQSQIQGMMSPMMNAGNTQQFMPHMAM 330
>gi|326518931|dbj|BAJ92626.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 47 CDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDK 106
CD+ E + + +R + S ++ R +H ERKRRD+IN+KM+ LQ+L+PN +K DK
Sbjct: 238 CDEAENVVVKGEAPMRSAISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKTDK 297
Query: 107 ASMLEEAIDYLKTLQFQV 124
ASML+E ID+LK LQ V
Sbjct: 298 ASMLDEVIDHLKQLQATV 315
>gi|326502778|dbj|BAJ99017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 464
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 47 CDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDK 106
CD+ E + + +R + S ++ R +H ERKRRD+IN+KM+ LQ+L+PN +K DK
Sbjct: 238 CDEAENVVVKGEAPMRSAISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKTDK 297
Query: 107 ASMLEEAIDYLKTLQFQV 124
ASML+E ID+LK LQ V
Sbjct: 298 ASMLDEVIDHLKQLQATV 315
>gi|291506702|gb|ADE08783.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506704|gb|ADE08784.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506706|gb|ADE08785.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506708|gb|ADE08786.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506710|gb|ADE08787.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506712|gb|ADE08788.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 430
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 68/101 (67%), Gaps = 7/101 (6%)
Query: 28 CNTFNLKR-RYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDK 86
C T + KR R DT+ S D K ++ S SNR+ R EVH ER+RRD+
Sbjct: 219 CITTDRKRKRINDTDESVSLSDAIGNKSNQR------SGSNRRSRAAEVHNLSERRRRDR 272
Query: 87 INKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
IN++M+ALQELIP+C+K DKAS+L+EAIDYLK+LQ Q+ +M
Sbjct: 273 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 313
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 58/85 (68%), Gaps = 6/85 (7%)
Query: 63 GSKSNRKKRTPE------VHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDY 116
G++ N+ RT + H E++RR KIN+KM+ALQ+LIPN NK DKASML+EAI+Y
Sbjct: 90 GNQRNKAVRTRQRSIDAKFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEY 149
Query: 117 LKTLQFQVMMMSMGTGVCMPSMMLP 141
LK LQ QV +++ G+ + M LP
Sbjct: 150 LKQLQLQVQALAVMNGLGLNPMRLP 174
>gi|356506557|ref|XP_003522046.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 397
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 61/89 (68%), Gaps = 4/89 (4%)
Query: 55 ERKAVTV-RGSKSNRK-KRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEE 112
+ KA V R S SN++ K VHK+ ER+RRDKIN++M+ LQ+L+PN +K DKASML+E
Sbjct: 216 DYKATKVDRSSGSNKRIKANSVVHKQSERRRRDKINQRMKELQKLVPNSSKTDKASMLDE 275
Query: 113 AIDYLKTLQFQVMMMSMGTGVCMPSMMLP 141
I Y+K LQ QV MM+ SMMLP
Sbjct: 276 VIQYMKQLQAQVQMMNWMK--MYTSMMLP 302
>gi|357147364|ref|XP_003574318.1| PREDICTED: transcription factor UNE10-like isoform 2 [Brachypodium
distachyon]
Length = 453
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Query: 47 CDQYEKKL--ERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV 104
CD+ E + E + +R S S ++ R +H ERKRRD+IN+KM+ LQ+L+PN +K
Sbjct: 234 CDEAETVVIKEEPPMRMRSSISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKT 293
Query: 105 DKASMLEEAIDYLKTLQFQV 124
DKASML+E I++LK LQ QV
Sbjct: 294 DKASMLDEVIEHLKQLQAQV 313
>gi|357147361|ref|XP_003574317.1| PREDICTED: transcription factor UNE10-like isoform 1 [Brachypodium
distachyon]
Length = 460
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Query: 47 CDQYEKKL--ERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV 104
CD+ E + E + +R S S ++ R +H ERKRRD+IN+KM+ LQ+L+PN +K
Sbjct: 234 CDEAETVVIKEEPPMRMRSSISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKT 293
Query: 105 DKASMLEEAIDYLKTLQFQV 124
DKASML+E I++LK LQ QV
Sbjct: 294 DKASMLDEVIEHLKQLQAQV 313
>gi|145334165|ref|NP_001078463.1| transcription factor bHLH127 [Arabidopsis thaliana]
gi|75296238|sp|Q7XHI7.1|BH127_ARATH RecName: Full=Transcription factor bHLH127; AltName: Full=Basic
helix-loop-helix protein 127; Short=AtbHLH127;
Short=bHLH 127; AltName: Full=bHLH transcription factor
bHLH127
gi|33111973|emb|CAE12173.1| putative bHLH127 transcription factor [Arabidopsis thaliana]
gi|332660148|gb|AEE85548.1| transcription factor bHLH127 [Arabidopsis thaliana]
Length = 307
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Query: 61 VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
RGS S ++ R E+H ER+RR+KIN++M+ LQ+LIP CNK K SMLE+ I+Y+K+L
Sbjct: 140 ARGSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSL 199
Query: 121 QFQV--MMMSMGTGVCMPSMMLP 141
+ Q+ M M G+ P +P
Sbjct: 200 EMQINQFMPHMAMGMNQPPAYIP 222
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 47/62 (75%)
Query: 66 SNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVM 125
S+++ R E H E++RR +IN+KM+ALQ LIPN NK DKASML+EAI+YLK LQ QV
Sbjct: 120 SSKRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 179
Query: 126 MM 127
+
Sbjct: 180 YL 181
>gi|297816208|ref|XP_002875987.1| hypothetical protein ARALYDRAFT_348075 [Arabidopsis lyrata subsp.
lyrata]
gi|297321825|gb|EFH52246.1| hypothetical protein ARALYDRAFT_348075 [Arabidopsis lyrata subsp.
lyrata]
Length = 311
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 71 RTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMG 130
+ P ++ ++RRD INKKMR LQ+L+PN +K D S+L+EAI+Y+K LQ QV MM+MG
Sbjct: 132 QVPARTRKALKQRRD-INKKMRTLQDLLPNSHKDDNESVLDEAINYMKNLQLQVQMMTMG 190
Query: 131 TGVCMPSMMLPTGIIGMQ 148
PSMMLP +GMQ
Sbjct: 191 NTFVTPSMMLP--FMGMQ 206
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Query: 63 GSKSNRKKRT--PEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
G + N KR + H E++RR KIN+KM+ALQ+LIPN NK DKASML+EAI+Y+K L
Sbjct: 82 GRQRNSLKRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYMKQL 141
Query: 121 QFQVMMMSMGTGVCMPSMML 140
Q QV +++ G+ + M L
Sbjct: 142 QLQVQTLAVMNGLGLNPMQL 161
>gi|222424750|dbj|BAH20328.1| AT2G43010 [Arabidopsis thaliana]
Length = 409
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 67/101 (66%), Gaps = 7/101 (6%)
Query: 28 CNTFNLKR-RYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDK 86
C T + KR R T+ S D K ++ S SNR+ R EVH ER+RRD+
Sbjct: 198 CITTDRKRKRINHTDESVSLSDAIGNKSNQR------SGSNRRSRAAEVHNLSERRRRDR 251
Query: 87 INKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
IN++M+ALQELIP+C+K DKAS+L+EAIDYLK+LQ Q+ +M
Sbjct: 252 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 292
>gi|30689218|ref|NP_565991.2| transcription factor PIF4 [Arabidopsis thaliana]
gi|28201855|sp|Q8W2F3.1|PIF4_ARATH RecName: Full=Transcription factor PIF4; AltName: Full=Basic
helix-loop-helix protein 9; Short=AtbHLH9; Short=bHLH 9;
AltName: Full=Phytochrome-interacting factor 4; AltName:
Full=Short under red-light 2; AltName:
Full=Transcription factor EN 102; AltName: Full=bHLH
transcription factor bHLH009
gi|18026966|gb|AAL55716.1|AF251694_1 putative transcription factor BHLH9 [Arabidopsis thaliana]
gi|21068661|emb|CAD29449.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|222423257|dbj|BAH19605.1| AT2G43010 [Arabidopsis thaliana]
gi|225898591|dbj|BAH30426.1| hypothetical protein [Arabidopsis thaliana]
gi|291506714|gb|ADE08789.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506716|gb|ADE08790.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506718|gb|ADE08791.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506720|gb|ADE08792.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506722|gb|ADE08793.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506724|gb|ADE08794.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506726|gb|ADE08795.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506728|gb|ADE08796.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|330255103|gb|AEC10197.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 430
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 67/101 (66%), Gaps = 7/101 (6%)
Query: 28 CNTFNLKR-RYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDK 86
C T + KR R T+ S D K ++ S SNR+ R EVH ER+RRD+
Sbjct: 219 CITTDRKRKRINHTDESVSLSDAIGNKSNQR------SGSNRRSRAAEVHNLSERRRRDR 272
Query: 87 INKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
IN++M+ALQELIP+C+K DKAS+L+EAIDYLK+LQ Q+ +M
Sbjct: 273 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 313
>gi|30689224|ref|NP_850381.1| transcription factor PIF4 [Arabidopsis thaliana]
gi|330255104|gb|AEC10198.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 428
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 67/101 (66%), Gaps = 7/101 (6%)
Query: 28 CNTFNLKR-RYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDK 86
C T + KR R T+ S D K ++ S SNR+ R EVH ER+RRD+
Sbjct: 219 CITTDRKRKRINHTDESVSLSDAIGNKSNQR------SGSNRRSRAAEVHNLSERRRRDR 272
Query: 87 INKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
IN++M+ALQELIP+C+K DKAS+L+EAIDYLK+LQ Q+ +M
Sbjct: 273 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 313
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 35 RRGQATDPHSIAERLRRERIAERMKALQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 94
Query: 128 SM---GTGVCMPSMM 139
SM G +PS++
Sbjct: 95 SMSRLGGAGALPSLV 109
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR+KI ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 139 RRGQATDPHSIAERLRREKIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 198
Query: 128 SM----GTGVCM 135
SM G G M
Sbjct: 199 SMSRLGGAGATM 210
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 51/65 (78%)
Query: 65 KSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQV 124
+S+++ R EVH E++RR +IN+KM+ALQ LIPN +K DKASML+EAI+YLK LQ QV
Sbjct: 132 RSSKRTRAAEVHNLSEKRRRSRINEKMKALQNLIPNSSKTDKASMLDEAIEYLKLLQLQV 191
Query: 125 MMMSM 129
+S+
Sbjct: 192 QGLSV 196
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 63/99 (63%), Gaps = 8/99 (8%)
Query: 50 YEKKLERKAVTVRGSKSNRKKRT-------PEVHKRYERKRRDKINKKMRALQELIPNCN 102
+ +E +A + G+ +N K RT + H ER RR+KI+++M+ LQ+L+PN N
Sbjct: 293 HSSDVEPQANSAPGNSANAKPRTRARRGQATDPHSIAERLRREKISERMKNLQDLVPNSN 352
Query: 103 KVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLP 141
K DKASML+E IDY+K LQ QV ++SM + + P +LP
Sbjct: 353 KADKASMLDEIIDYVKFLQLQVKVLSM-SRLGAPGAVLP 390
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 52/76 (68%), Gaps = 4/76 (5%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 220 RRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 279
Query: 128 SM----GTGVCMPSMM 139
S+ G MPS +
Sbjct: 280 SVSRLGGATAAMPSRL 295
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 34 RRGQATDPHSIAERLRRERIAERMKALQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 93
Query: 128 SM 129
SM
Sbjct: 94 SM 95
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 199 RRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQVKVL 258
Query: 128 SM----GTGVCMP 136
SM G G P
Sbjct: 259 SMSRLGGAGAVAP 271
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 40 RRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 99
Query: 128 SM 129
SM
Sbjct: 100 SM 101
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 202 RRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQVKVL 261
Query: 128 SM----GTGVCMP 136
SM G G P
Sbjct: 262 SMSRLGGAGAVAP 274
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 107 RRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 166
Query: 128 SM 129
SM
Sbjct: 167 SM 168
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 47/60 (78%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
++ R EVH E++RR +IN+KM+ALQ LIPN +K DKASML++AI+YLK LQ QV M+
Sbjct: 29 KRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQMI 88
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 141 RRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 200
Query: 128 SM 129
SM
Sbjct: 201 SM 202
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 141 RRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 200
Query: 128 SM 129
SM
Sbjct: 201 SM 202
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 46/62 (74%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 263 RRGQATHPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 322
Query: 128 SM 129
SM
Sbjct: 323 SM 324
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 256 RRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 315
Query: 128 SM 129
SM
Sbjct: 316 SM 317
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 141 RRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 200
Query: 128 SM 129
SM
Sbjct: 201 SM 202
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 207 RRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 266
Query: 128 SM 129
SM
Sbjct: 267 SM 268
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 250 RRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 309
Query: 128 SM 129
SM
Sbjct: 310 SM 311
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E +DY+K LQ QV ++
Sbjct: 243 RRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVKVL 302
Query: 128 SM 129
SM
Sbjct: 303 SM 304
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E +DY+K LQ QV ++
Sbjct: 242 RRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVKVL 301
Query: 128 SM 129
SM
Sbjct: 302 SM 303
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 228 RRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 287
Query: 128 SM 129
SM
Sbjct: 288 SM 289
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 259 RRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 318
Query: 128 SM 129
SM
Sbjct: 319 SM 320
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M++LQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 186 RRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 245
Query: 128 SM 129
SM
Sbjct: 246 SM 247
>gi|413932893|gb|AFW67444.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 387
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 57/94 (60%), Gaps = 21/94 (22%)
Query: 87 INKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIG 146
I +KMRALQELIP+CNK DKAS+L+E I+YLK+LQ QV +M M +G M+P G
Sbjct: 205 IKEKMRALQELIPHCNKTDKASILDETIEYLKSLQMQVQIMWMTSG------MVPMVFPG 258
Query: 147 MQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPA 180
Q + PPM +GM+ +GC PA
Sbjct: 259 AHQ---------YMPPMALGMN------SGCIPA 277
>gi|223702404|gb|ACN21633.1| putative basic helix-loop-helix protein BHLH9 [Lotus japonicus]
Length = 165
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 46/65 (70%)
Query: 71 RTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMG 130
R EV ++RR +IN+ M+ALQ LIPN NK DKA ML+EAIDYLK LQ QV M+S+
Sbjct: 75 RAAEVLNLSGKRRRSRINENMKALQNLIPNSNKTDKAFMLDEAIDYLKQLQLQVQMLSLR 134
Query: 131 TGVCM 135
G+ +
Sbjct: 135 NGLSL 139
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQ+L+PN NK DKASML+E +DY+K LQ QV ++
Sbjct: 7 RRGQATDPHSIAERLRRERIAERMKALQDLVPNANKTDKASMLDEIVDYVKFLQLQVKVL 66
Query: 128 SM---GTGVCMPSMM 139
SM G+ +PS++
Sbjct: 67 SMSRLGSAAAVPSLV 81
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 8/99 (8%)
Query: 50 YEKKLERKAVTVRGSKSNRKKRT-------PEVHKRYERKRRDKINKKMRALQELIPNCN 102
+ +E +A + G+ +N K RT + H ER RR+KI+++M+ LQ L+PN N
Sbjct: 294 HSSDVEPQANSAPGNSANAKPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSN 353
Query: 103 KVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLP 141
K DKASML+E IDY+K LQ QV ++SM + + P +LP
Sbjct: 354 KADKASMLDEIIDYVKFLQLQVKVLSM-SRLGAPGAVLP 391
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 177 RRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 236
Query: 128 SM 129
SM
Sbjct: 237 SM 238
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 8/99 (8%)
Query: 50 YEKKLERKAVTVRGSKSNRKKRT-------PEVHKRYERKRRDKINKKMRALQELIPNCN 102
+ +E +A + G+ +N K RT + H ER RR+KI+++M+ LQ L+PN N
Sbjct: 294 HSSDVEPQANSAPGNSANAKPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSN 353
Query: 103 KVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLP 141
K DKASML+E IDY+K LQ QV ++SM + + P +LP
Sbjct: 354 KADKASMLDEIIDYVKFLQLQVKVLSM-SRLGAPGAVLP 391
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+P+ NK DKASML+E IDY+K LQ QV ++
Sbjct: 147 RRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQVQVKVL 206
Query: 128 SM----GTGVCMP 136
SM G G P
Sbjct: 207 SMSRLGGAGAVAP 219
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR+KI+ +M++LQ+L+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 323 RRGQATDPHSIAERLRREKISDRMKSLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKVL 382
Query: 128 SMGTGVCMPSMMLP 141
SM + + P +LP
Sbjct: 383 SM-SRLGAPGAVLP 395
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 8/99 (8%)
Query: 50 YEKKLERKAVTVRGSKSNRKKRT-------PEVHKRYERKRRDKINKKMRALQELIPNCN 102
+ +E +A + G+ +N K RT + H ER RR+KI+++M+ LQ L+PN N
Sbjct: 294 HSSDVEPQANSAPGNSANAKPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSN 353
Query: 103 KVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLP 141
K DKASML+E IDY+K LQ QV ++SM + + P +LP
Sbjct: 354 KADKASMLDEIIDYVKFLQLQVKVLSM-SRLGAPGAVLP 391
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
++ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 191 KRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 250
Query: 128 SM 129
SM
Sbjct: 251 SM 252
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR+KI+ +M+ LQ+L+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 320 RRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKVL 379
Query: 128 SMGTGVCMPSMMLP 141
SM + V P +LP
Sbjct: 380 SM-SRVGAPGAVLP 392
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY++ LQ QV ++
Sbjct: 141 RRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVEFLQLQVKVL 200
Query: 128 SM 129
SM
Sbjct: 201 SM 202
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 200 RRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 259
Query: 128 SM 129
SM
Sbjct: 260 SM 261
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M++LQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 207 RRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 266
Query: 128 SM 129
SM
Sbjct: 267 SM 268
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M++LQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 207 RRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 266
Query: 128 SM 129
SM
Sbjct: 267 SM 268
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR+KI+++M+ LQEL+PN NK DK+SML+E IDY+K LQ QV ++
Sbjct: 324 RRGQATDPHSIAERLRREKISERMKNLQELVPNSNKADKSSMLDEIIDYVKFLQLQVKVL 383
Query: 128 SMGTGVCMPSMMLP 141
SM + + P +LP
Sbjct: 384 SM-SRLGAPGAVLP 396
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
++ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 198 KRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 257
Query: 128 SM 129
SM
Sbjct: 258 SM 259
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 8/99 (8%)
Query: 50 YEKKLERKAVTVRGSKSNRKKRT-------PEVHKRYERKRRDKINKKMRALQELIPNCN 102
+ +E +A + G+ +N K RT + H ER RR+KI+++M+ LQ L+PN N
Sbjct: 217 HSSDVEPQANSAPGNSANAKPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSN 276
Query: 103 KVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLP 141
K DKASML+E IDY+K LQ QV ++SM + + P +LP
Sbjct: 277 KADKASMLDEIIDYVKFLQLQVKVLSM-SRLGAPGAVLP 314
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR+KI+ +M+ LQ+L+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 285 RRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKVL 344
Query: 128 SMGTGVCMPSMMLP 141
SM + V P +LP
Sbjct: 345 SM-SRVGAPGAVLP 357
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV+ M
Sbjct: 253 RRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVLSM 312
Query: 128 SMGTGVC 134
S G
Sbjct: 313 SRLGGAA 319
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 4/101 (3%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + H ER RR+KI ++M+ LQEL+PN NKVDKASML+E I+Y+K LQ QV ++
Sbjct: 243 RRGHATDPHSIAERLRREKIAERMKNLQELVPNSNKVDKASMLDEIIEYVKFLQLQVKVL 302
Query: 128 SMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMD 168
SM + + ++P G + H +S P G+G+D
Sbjct: 303 SM-SRLGAAGAVIPLLTDGQPEGH---NSLSLSPSAGLGID 339
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 42/53 (79%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV+ MS
Sbjct: 250 HSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVLSMS 302
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M++LQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 133 RRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 192
Query: 128 SM 129
SM
Sbjct: 193 SM 194
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M++LQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 133 RRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 192
Query: 128 SM 129
SM
Sbjct: 193 SM 194
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR+KI+ +M+ LQ+L+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 323 RRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKVL 382
Query: 128 SMGTGVCMPSMMLP 141
SM + + P +LP
Sbjct: 383 SM-SRLGAPGAVLP 395
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR+KI+ +M+ LQ+L+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 323 RRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKVL 382
Query: 128 SMGTGVCMPSMMLP 141
SM + + P +LP
Sbjct: 383 SM-SRLGAPGAVLP 395
>gi|359489230|ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 465
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 42/50 (84%)
Query: 75 VHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQV 124
+H + ERKRRDKIN++M+ LQ+L+PN +K DKASML+E I+YLK LQ QV
Sbjct: 286 IHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 335
>gi|449441077|ref|XP_004138310.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 321
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 74/117 (63%), Gaps = 8/117 (6%)
Query: 30 TFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEV-HKRYERKRRDKIN 88
TF K +D A D EK+ K T GS SNR+ RT + H +YER+RRD+IN
Sbjct: 133 TFKSKNSIQDL---ALEHDGSEKEYNMKGKT-DGSCSNRRTRTAAINHNQYERRRRDRIN 188
Query: 89 KKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM-SMGTGVCMPSMMLPTGI 144
++M+ LQ+L+PN +K D+AS+L++ I YLK LQ QV M S+ + V P M++P GI
Sbjct: 189 QRMKDLQKLVPNGSKTDRASLLDDTIQYLKQLQAQVQFMDSIRSAV--PQMVMPLGI 243
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M++LQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 131 RRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 190
Query: 128 SM 129
SM
Sbjct: 191 SM 192
>gi|145712853|gb|ABP96466.1| phytochrome interacting factor 4 [Arabidopsis lyrata subsp.
petraea]
Length = 250
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Query: 64 SKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
S SNR+ R EVH ER RRD+IN++M+ALQELIP+C+K DKAS+L+ AIDY+K+L
Sbjct: 195 SGSNRRSRAAEVHNLSER-RRDRINERMKALQELIPHCSKTDKASILDGAIDYMKSL 250
>gi|297734539|emb|CBI16590.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 42/50 (84%)
Query: 75 VHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQV 124
+H + ERKRRDKIN++M+ LQ+L+PN +K DKASML+E I+YLK LQ QV
Sbjct: 32 IHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 81
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 45/61 (73%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+ N NK DKASML+E IDY+K LQ QV+ M
Sbjct: 120 RRGQATDPHSIAERLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKFLQLQVLSM 179
Query: 128 S 128
S
Sbjct: 180 S 180
>gi|297848442|ref|XP_002892102.1| hypothetical protein ARALYDRAFT_333565 [Arabidopsis lyrata subsp.
lyrata]
gi|297337944|gb|EFH68361.1| hypothetical protein ARALYDRAFT_333565 [Arabidopsis lyrata subsp.
lyrata]
Length = 279
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Query: 48 DQYEKKLERKAVTVRGSKSNRKKR-TPEVHKRYERKRR-DKINKKMRALQELIPNCNKVD 105
+++EK R++ +S+ R P V ++ ++RR D++ KMR LQ+L+P+C+K D
Sbjct: 96 NKHEKPKRRRSQVFSDEESDGFTREVPSVIRKGSKRRRSDELCNKMRTLQQLVPDCHKTD 155
Query: 106 KASMLEEAIDYLKTLQFQVMMMS-MGTGVCMPSMMLPTGIIGMQQMHAVA 154
K S+L+ AI+Y+K+LQ Q +MS MG PS +L GI+ Q+ A+A
Sbjct: 156 KVSVLDNAIEYMKSLQLQFKVMSMMGMNPYFPSAILDYGIMNNHQLTAMA 205
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 45/61 (73%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+ N NK DKASML+E IDY+K LQ QV+ M
Sbjct: 148 RRGQATDPHSIAERLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKFLQLQVLSM 207
Query: 128 S 128
S
Sbjct: 208 S 208
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR+KI+++M+ LQ+L+PN NK DK+SML+E IDY+K LQ QV ++
Sbjct: 323 RRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKSSMLDEIIDYVKFLQLQVKVL 382
Query: 128 SMGTGVCMPSMMLP 141
SM + + P +LP
Sbjct: 383 SM-SRLGAPGAVLP 395
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M++LQEL+PN NK DKASML+E IDY+K LQ QV ++
Sbjct: 190 RRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 249
Query: 128 SM 129
SM
Sbjct: 250 SM 251
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 43/54 (79%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
H ER RR++I ++M++LQEL+PN NK DKASML+E IDY+K LQ QV ++SM
Sbjct: 224 HSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSM 277
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 43/54 (79%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
H ER RR++I ++M+ALQEL+P+ NK DKASML+E IDY+K LQ QV ++SM
Sbjct: 175 HSIAERLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQLQVKVLSM 228
>gi|42573075|ref|NP_974634.1| transcription factor bHLH23 [Arabidopsis thaliana]
gi|332660144|gb|AEE85544.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 340
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%)
Query: 61 VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
R S S+++ R +HK ER+RR KIN+ M+ALQEL+P C K D++SML++ I+Y+K+L
Sbjct: 267 ARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSL 326
Query: 121 QFQV 124
Q Q+
Sbjct: 327 QSQI 330
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 46/62 (74%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR+KI+ +M+ LQEL+PN NK +KASML+E IDY+K LQ QV ++
Sbjct: 317 RRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQLQVKVL 376
Query: 128 SM 129
SM
Sbjct: 377 SM 378
>gi|145712878|gb|ABP96468.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712880|gb|ABP96469.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712882|gb|ABP96470.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712886|gb|ABP96472.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712892|gb|ABP96475.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712898|gb|ABP96478.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 251
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 63/94 (67%), Gaps = 7/94 (7%)
Query: 28 CNTFNLKR-RYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDK 86
C T + KR R DT+ S D K ++ S SNR+ R EVH ER+RRD+
Sbjct: 164 CITTDRKRKRINDTDESVSLSDAIGNKSNQR------SGSNRRSRAAEVHNLSERRRRDR 217
Query: 87 INKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
IN++M+ALQELIP+C+K DKAS+L+EAIDYLK+L
Sbjct: 218 INERMKALQELIPHCSKTDKASILDEAIDYLKSL 251
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 46/62 (74%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR+KI+ +M+ LQEL+PN NK +KASML+E IDY+K LQ QV ++
Sbjct: 317 RRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQLQVKVL 376
Query: 128 SM 129
SM
Sbjct: 377 SM 378
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 43/54 (79%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
H ER RR++I ++M++LQEL+PN NK DKASML+E IDY+K LQ QV ++SM
Sbjct: 270 HSIAERLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 323
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 46/62 (74%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR+KI ++M+ LQEL+PN NK DKASML+E I+Y+K LQ QV ++
Sbjct: 299 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQLQVKVL 358
Query: 128 SM 129
SM
Sbjct: 359 SM 360
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 43/54 (79%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
H ER RR++I ++M++LQEL+PN NK DKASML+E IDY+K LQ QV ++SM
Sbjct: 270 HSIAERLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 323
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 50/69 (72%)
Query: 61 VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
+R + ++ + + H ER RR++I ++M++LQEL+PN NK DKASML+E IDY++ L
Sbjct: 190 LRQRQRAKRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVRFL 249
Query: 121 QFQVMMMSM 129
Q QV ++SM
Sbjct: 250 QLQVKVLSM 258
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 46/62 (74%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR+KI+ +M+ LQEL+PN N+ DKASML+E I+Y+K LQ QV ++
Sbjct: 301 RRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRTDKASMLDEIIEYVKFLQLQVKVL 360
Query: 128 SM 129
SM
Sbjct: 361 SM 362
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 43/52 (82%)
Query: 78 RYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
R +R RR++I ++M++LQEL+PN NK DKASML+E IDY+K LQ QV ++SM
Sbjct: 149 RQQRLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSM 200
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+KKM+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 190 RRGQATDRHSLAERARREKISKKMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEF 249
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHA 152
+SM V P + L + ++Q A
Sbjct: 250 LSMKLAVLNPELELAVEDLSVKQFQA 275
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 70/133 (52%), Gaps = 10/133 (7%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+KKM+ LQ+++P CNKV KA ML+E I+Y++ LQ QV
Sbjct: 188 RRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEF 247
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHA-----VAPQ---MSHFPPMGIGMDGRMQMGAGCN 178
+SM V P + L + ++Q A VA + M P + G + + A N
Sbjct: 248 LSMKLAVLNPELELAVEDVSVKQFQAYFTNVVASKQSIMVDVPLFPLDQQGSLDLSA-IN 306
Query: 179 PAQFLMPPIPGAT 191
P Q P A+
Sbjct: 307 PNQTTSIEAPSAS 319
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR+KI ++M+ LQEL+PN +KVDKASML+E I+Y+K LQ QV ++
Sbjct: 354 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSSKVDKASMLDEIIEYVKFLQLQVKVL 413
Query: 128 SM----GTGVCMP 136
SM TG +P
Sbjct: 414 SMSRLGATGAVIP 426
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M++LQEL+PN NK DKASML+E I+Y++ LQ QV ++
Sbjct: 102 RRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVL 161
Query: 128 SM----GTGVCMPSM 138
SM G G P +
Sbjct: 162 SMSRLGGAGAVGPRL 176
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 46/62 (74%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E I Y+K LQ QV ++
Sbjct: 33 RRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIGYVKFLQLQVKVL 92
Query: 128 SM 129
SM
Sbjct: 93 SM 94
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 4/76 (5%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR+KI+ +M+ LQEL+PN NK DKASMLEE I+Y+K LQ Q ++
Sbjct: 285 RRGQATDPHSIAERLRREKISDRMKNLQELVPNSNKTDKASMLEEIIEYIKFLQLQTKVL 344
Query: 128 SM----GTGVCMPSMM 139
SM T +P +M
Sbjct: 345 SMSRLGATDALVPLLM 360
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 46/62 (74%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR+KI ++M+ LQEL+PN NK DKASML+E I+Y+K LQ QV ++
Sbjct: 152 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQLQVKVL 211
Query: 128 SM 129
SM
Sbjct: 212 SM 213
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++MRALQEL+PN NK D+A+ML+E +DY+K L+ QV ++
Sbjct: 127 RRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 186
Query: 128 SM 129
SM
Sbjct: 187 SM 188
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR+KI+ +M+ LQ+L+PN NK DKASML+E ID++K LQ QV ++
Sbjct: 323 RRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDHVKFLQLQVKVL 382
Query: 128 SMGTGVCMPSMMLP 141
SM + + P +LP
Sbjct: 383 SM-SRLGAPGAVLP 395
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M++LQEL+PN NK DKASML+E I+Y++ LQ QV ++
Sbjct: 102 RRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVL 161
Query: 128 SM 129
SM
Sbjct: 162 SM 163
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++MRALQEL+PN NK D+A+ML+E +DY+K L+ QV ++
Sbjct: 119 RRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 178
Query: 128 SM 129
SM
Sbjct: 179 SM 180
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 59/95 (62%), Gaps = 5/95 (5%)
Query: 37 YEDTEGSACPCDQYEKKLERKA---VTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRA 93
Y DT+ S+ C E LE A G+++NR T + Y RKRR++IN+++R
Sbjct: 158 YIDTQSSSS-CTSEEGNLEGNAKPSSKKMGTRANRGAAT-DPQSLYARKRRERINERLRI 215
Query: 94 LQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S
Sbjct: 216 LQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 250
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 50/69 (72%)
Query: 61 VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
VR R+ + + H ER RR++I ++M+ALQEL+P+CNK D+A+ML+E +DY+K L
Sbjct: 153 VRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFL 212
Query: 121 QFQVMMMSM 129
+ QV ++SM
Sbjct: 213 RLQVKVLSM 221
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 59/95 (62%), Gaps = 5/95 (5%)
Query: 37 YEDTEGSACPCDQYEKKLERKA---VTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRA 93
Y DT+ S+ C E LE A G+++NR T + Y RKRR++IN+++R
Sbjct: 158 YIDTQSSSS-CTSEEGNLEGNAKPSSKKMGTRANRGAAT-DPQSLYARKRRERINERLRI 215
Query: 94 LQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S
Sbjct: 216 LQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 250
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++MRALQEL+PN NK D+A+ML+E +DY+K L+ QV ++
Sbjct: 136 RRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 195
Query: 128 SM 129
SM
Sbjct: 196 SM 197
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQV 124
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV
Sbjct: 162 RRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQV 218
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++MRALQEL+PN NK D+A+ML+E +DY+K L+ QV ++
Sbjct: 136 RRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 195
Query: 128 SM 129
SM
Sbjct: 196 SM 197
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR+KI+++M+ LQ+L+PN NK DK+SML+E IDY+K LQ QV ++
Sbjct: 322 RRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKSSMLDEIIDYVKFLQLQVKVL 381
Query: 128 SMGTGVCMPSMMLP 141
M + + P +LP
Sbjct: 382 CM-SRLGAPGAVLP 394
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++MRALQEL+PN NK D+A+ML+E +DY+K L+ QV ++
Sbjct: 118 RRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 177
Query: 128 SM 129
SM
Sbjct: 178 SM 179
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+KKM+ LQ+++P CNKV KA ML+E I+Y++ LQ QV
Sbjct: 188 RRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEF 247
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHA-----VAPQ---MSHFPPMGIGMDGRMQMGAGCN 178
+SM V P + L + ++Q A VA + M P + G + + A N
Sbjct: 248 LSMKLAVLNPELELAVEDVSVKQFQAYFTNVVASKQSIMVDVPLFPLDQQGSLDLSA-IN 306
Query: 179 PAQ 181
P Q
Sbjct: 307 PNQ 309
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 90/189 (47%), Gaps = 33/189 (17%)
Query: 35 RRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKR----TPEVHKRY----------- 79
+RY+ E + D + K E+ + G S ++ + TPE K Y
Sbjct: 353 KRYKGAEVGSNEKDDAKSKAEQSTILSTGESSPKQTKDIVKTPEPPKDYIHVRARRGQAT 412
Query: 80 ------ERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTG 132
ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV +SM
Sbjct: 413 DSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA 472
Query: 133 VCMPSMMLP-TGIIG--MQQMHAVAPQM-------SHFPPMGIGMDGRMQMGAGCNPAQF 182
P + G+I M Q H +P+M + FP + G +Q+G C
Sbjct: 473 TVNPRLDFNMDGLIAKDMLQSHGSSPRMLFSTDPTAAFPQLHQPQQGPVQVGVTCGTEGH 532
Query: 183 LM-PPIPGA 190
M P+ GA
Sbjct: 533 RMGHPVEGA 541
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
R + R+ + + H ER RR++I ++MRALQEL+PN NK D+A+ML+E +DY+K L+
Sbjct: 123 RPKQRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 182
Query: 122 FQVMMMSM 129
QV ++SM
Sbjct: 183 LQVKVLSM 190
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 50/69 (72%)
Query: 61 VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
VR R+ + + H ER RR++I ++M+ALQEL+P+CNK D+A+ML+E +DY+K L
Sbjct: 54 VRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFL 113
Query: 121 QFQVMMMSM 129
+ QV ++SM
Sbjct: 114 RLQVKVLSM 122
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 52/70 (74%)
Query: 60 TVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKT 119
++R R+ + + H ER RR++I+++++ALQEL+P+CNK D+A+ML+E +DY+K
Sbjct: 137 SIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKTDRAAMLDEILDYVKF 196
Query: 120 LQFQVMMMSM 129
L+ QV ++SM
Sbjct: 197 LRLQVKVLSM 206
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+KKM+ LQ+++P CNKV KA ML+E I+Y++ LQ QV
Sbjct: 188 RRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEF 247
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHA-----VAPQ---MSHFPPMGIGMDGRMQMGAGCN 178
+SM V P + L + ++Q A VA + M P + G + + A N
Sbjct: 248 LSMKLAVLNPELELAVEDVSVKQFQAYFTNVVASKQSIMVDVPLFPLDQQGSLDLSA-IN 306
Query: 179 PAQ 181
P Q
Sbjct: 307 PNQ 309
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 9/106 (8%)
Query: 54 LERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEA 113
+ RK+ RGS ++ P+ Y RKRR++IN+++R LQ+L+PN KVD ++MLEEA
Sbjct: 233 VNRKSRASRGSATD-----PQ--SLYARKRRERINERLRILQKLVPNGTKVDISTMLEEA 285
Query: 114 IDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSH 159
+ Y+K LQ Q+ ++S + IG+Q H ++P +SH
Sbjct: 286 VHYVKFLQLQIKLLSSDEMWMFAPLAYNGMDIGLQ--HNLSPFLSH 329
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+KKM+ LQ+++P CNKV KA ML+E I+Y++ LQ QV
Sbjct: 171 RRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEF 230
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHA 152
+SM V P + L + ++Q A
Sbjct: 231 LSMKLAVLNPELELAVEDVSVKQFQA 256
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 52/70 (74%)
Query: 60 TVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKT 119
++R R+ + + H ER RR++I+++++ALQEL+P+CNK D+A+ML+E +DY+K
Sbjct: 136 SIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKTDRAAMLDEILDYVKF 195
Query: 120 LQFQVMMMSM 129
L+ QV ++SM
Sbjct: 196 LRLQVKVLSM 205
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSM 138
Y RKRR++IN+++R LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S + M +
Sbjct: 301 YARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLS-SDDMWMYAP 359
Query: 139 MLPTGI-IGMQQMHAVAPQM 157
+ G+ IG+Q +H P +
Sbjct: 360 IAYNGMDIGLQNLHQKIPSL 379
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSM 138
Y RKRR++IN+++R LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S + M +
Sbjct: 301 YARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLS-SDDMWMYAP 359
Query: 139 MLPTGI-IGMQQMHAVAPQM 157
+ G+ IG+Q +H P +
Sbjct: 360 IAYNGMDIGLQNLHQKIPSL 379
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++MRALQEL+PN NK D+A+ML+E +DY+K L+ QV ++
Sbjct: 27 RRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 86
Query: 128 SM 129
SM
Sbjct: 87 SM 88
>gi|145712876|gb|ABP96467.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712884|gb|ABP96471.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712888|gb|ABP96473.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712890|gb|ABP96474.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712894|gb|ABP96476.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712896|gb|ABP96477.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712900|gb|ABP96479.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712902|gb|ABP96480.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 251
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 49/57 (85%)
Query: 64 SKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
S SNR+ R EVH ER+RRD+IN++M+ALQELIP+C+K DKAS+L+EAIDYLK+L
Sbjct: 195 SGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSL 251
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 46/62 (74%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++MRALQEL+PN NK D+A ML+E +DY+K L+ QV ++
Sbjct: 125 RRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAVMLDEILDYVKFLRLQVKVL 184
Query: 128 SM 129
SM
Sbjct: 185 SM 186
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++MRALQ+L+PN NK D+A+ML+E +DY+K L+ QV ++
Sbjct: 184 RRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 243
Query: 128 SM 129
SM
Sbjct: 244 SM 245
>gi|3193326|gb|AAC19308.1| contains similarity to transcriptional activators such as Ra-like
and myc-like regulatory R proteins [Arabidopsis
thaliana]
gi|7267092|emb|CAB80763.1| putative transcriptional regulator [Arabidopsis thaliana]
Length = 329
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 40/47 (85%)
Query: 82 KRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
KRRDKIN++M+ LQ+L+PN +K DKASML+E I+YLK LQ QV MMS
Sbjct: 154 KRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMS 200
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSM 138
Y RKRR++IN+++R LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S + M +
Sbjct: 107 YARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLS-SDDMWMYAP 165
Query: 139 MLPTGI-IGMQQMHAVAPQM 157
+ G+ IG+Q +H P +
Sbjct: 166 IAYNGMDIGLQNLHQKIPSL 185
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 49/62 (79%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I+++++ALQEL+PNCNK D+A++++E +DY+K L+ QV ++
Sbjct: 137 RRGQATDPHSIAERLRRERISERIKALQELVPNCNKTDRAALVDEILDYVKFLRLQVKVL 196
Query: 128 SM 129
SM
Sbjct: 197 SM 198
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 67/121 (55%), Gaps = 8/121 (6%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+KKM+ LQ+++P CNKV KA ML+E I+Y++ LQ QV
Sbjct: 188 RRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEF 247
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMH---AVAPQ---MSHFPPMGIGMDGRMQMGAGCNPA 180
+SM V P + L + ++Q + VA + M P + G + + A NP
Sbjct: 248 LSMKLAVLNPELELAVEDVSVKQAYFTNVVASKQSIMVDVPLFPLDQQGSLDLSA-INPN 306
Query: 181 Q 181
Q
Sbjct: 307 Q 307
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++MRALQ+L+PN NK D+A+ML+E +DY+K L+ QV ++
Sbjct: 135 RRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 194
Query: 128 SM 129
SM
Sbjct: 195 SM 196
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++MRALQEL+PN NK D+A+ML+E +DY+K L+ QV ++
Sbjct: 136 RRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 195
Query: 128 SM 129
S+
Sbjct: 196 SI 197
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+P+ NK D+A+ML+E +DY+K L+ QV ++
Sbjct: 154 RRGQATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYVKFLRLQVKVL 213
Query: 128 SM 129
SM
Sbjct: 214 SM 215
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 40/47 (85%)
Query: 83 RRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++SM
Sbjct: 251 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSM 297
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+P+ NK D+A+ML+E +DY+K L+ QV ++
Sbjct: 178 RRGQATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYVKFLRLQVKVL 237
Query: 128 SM 129
SM
Sbjct: 238 SM 239
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 40/47 (85%)
Query: 83 RRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++SM
Sbjct: 252 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSM 298
>gi|242084068|ref|XP_002442459.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
gi|241943152|gb|EES16297.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
Length = 342
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 48/68 (70%)
Query: 63 GSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQF 122
G S+ + E HK E++RR KIN++++ LQ+L+P C+K ++AS L++ I Y+K+LQ
Sbjct: 162 GGPSSWRSHHGEAHKLTEKRRRHKINERLKTLQQLVPGCSKSNQASTLDQTIHYMKSLQQ 221
Query: 123 QVMMMSMG 130
QV MS+G
Sbjct: 222 QVQAMSVG 229
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 46/62 (74%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR +I ++++ALQEL+P CNK D+A+ML+E +DY+K L+ QV ++
Sbjct: 23 RRGQATDPHSIAERLRRVRITERVKALQELVPTCNKTDRAAMLDEIVDYVKFLRLQVKVL 82
Query: 128 SM 129
SM
Sbjct: 83 SM 84
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+P+ NK D+A+ML+E +DY+K L+ QV ++
Sbjct: 172 RRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLRLQVKVL 231
Query: 128 SM 129
SM
Sbjct: 232 SM 233
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 40/47 (85%)
Query: 83 RRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++SM
Sbjct: 252 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSM 298
>gi|413924221|gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 230
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 42/51 (82%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
+ + RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++SM
Sbjct: 138 FGQLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSM 188
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++MRALQEL+P+ NK D+A+ML+E +DY+K L+ QV ++
Sbjct: 183 RRGQATDPHSIAERLRRERIAERMRALQELVPSINKSDRAAMLDEIVDYVKFLRLQVKVL 242
Query: 128 SM 129
SM
Sbjct: 243 SM 244
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+P+ NK D+A+ML+E +DY+K L+ QV ++
Sbjct: 172 RRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLRLQVKVL 231
Query: 128 SM 129
SM
Sbjct: 232 SM 233
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++MR LQEL+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 149 RRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEF 208
Query: 127 MSMGTGVCMP--SMMLPTGIIGMQQMHAVAPQMSHFPP 162
+SM P S + + G Q A P P
Sbjct: 209 LSMKIAASNPVVSFDIVEDLFGRQLKQACGPAAGQLEP 246
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR+KI+ +M+ LQEL+PN N+ DKASML+E I+Y+K LQ QV +
Sbjct: 301 RRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRTDKASMLDEIIEYVKFLQLQVKVR 360
Query: 128 S 128
S
Sbjct: 361 S 361
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+P+ NK D+A+ML+E +DY+K L+ QV ++
Sbjct: 102 RRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLRLQVKVL 161
Query: 128 SM 129
SM
Sbjct: 162 SM 163
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 64 SKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQ 123
+K++R+ T E Y RKRR++IN+++R LQ L+PN KVD ++MLEEA++Y+K LQ Q
Sbjct: 210 AKADRRSAT-ESQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVEYVKFLQLQ 268
Query: 124 VMMMS 128
+ ++S
Sbjct: 269 IKLLS 273
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++MR LQEL+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 149 RRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEF 208
Query: 127 MSMGTGVCMP--SMMLPTGIIGMQQMHAVAPQMSHFPP 162
+SM P S + + G Q A P P
Sbjct: 209 LSMKIAASNPVVSFDIVEDLFGRQLKQACGPAAGQLEP 246
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 46/62 (74%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR +I ++++ALQEL+P CNK D+A+ML+E +DY+K L+ Q+ ++
Sbjct: 19 RRGQATDPHSIAERLRRVRITERVKALQELVPTCNKTDRAAMLDEIVDYVKFLRLQIKVL 78
Query: 128 SM 129
SM
Sbjct: 79 SM 80
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 188 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEF 247
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGI 165
+SM P + L I + + ++FP +GI
Sbjct: 248 LSMKLAAVNPRLDL--SIDDLFDKDVFSTCATNFPNIGI 284
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSM 138
Y RKRR++IN+++R LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S + M +
Sbjct: 278 YARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS-SEDLWMYAP 336
Query: 139 MLPTGI-IGMQQMHAVAP 155
+ G+ IG+ + AP
Sbjct: 337 IAYNGMDIGLDHLKVTAP 354
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++MR LQEL+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 157 RRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 216
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGI----GMDGRM-QMGAGCNPAQ 181
+SM P + + I + + + + + P +G+ G G + + A NP
Sbjct: 217 LSMKLATVNPEINIDIDRILAKDL--LQSRDRNTPTLGLNPFAGFQGNIPNLSATTNPQY 274
Query: 182 FLMPPIPGATAVPGIQMPGFPGQPLPMSML 211
+P + + + GF P MS
Sbjct: 275 NPLPQTTLESELQNLYQMGFVSNPSTMSSF 304
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 47/62 (75%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+P+ NK D+A+ML+E +DY+K L+ QV ++
Sbjct: 169 RRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLRLQVKVL 228
Query: 128 SM 129
SM
Sbjct: 229 SM 230
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P CNK V KA ML+E I+Y+++LQ QV
Sbjct: 273 RRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEF 332
Query: 127 MSMGTGVCMPSM---MLPTGIIGMQQMHAVAPQMSHFP 161
+SM P + LP + Q Q SHFP
Sbjct: 333 LSMKLATVNPQLDFNNLPNLLAKDMQQSCGQLQSSHFP 370
>gi|18378953|ref|NP_563650.1| transcription factor HFR1 [Arabidopsis thaliana]
gi|20532238|sp|Q9FE22.1|HFR1_ARATH RecName: Full=Transcription factor HFR1; AltName: Full=Basic
helix-loop-helix protein 26; Short=AtbHLH26; Short=bHLH
26; AltName: Full=Protein LONG HYPOCOTYL IN FAR-RED 1;
AltName: Full=Protein REDUCED PHYTOCHROME SIGNALING;
AltName: Full=Reduced sensitivity to far-red light;
AltName: Full=Transcription factor EN 68; AltName:
Full=bHLH transcription factor bHLH026
gi|11870115|gb|AAG40617.1|AF324245_1 bHLH-like protein HFR1 [Arabidopsis thaliana]
gi|12025106|gb|AAG45733.1|AF288287_1 reduced phytochrome signaling 1 [Arabidopsis thaliana]
gi|13183644|gb|AAK15282.1|AF323182_1 basic helix-loop-helix FBI1 protein [Arabidopsis thaliana]
gi|332189297|gb|AEE27418.1| transcription factor HFR1 [Arabidopsis thaliana]
Length = 292
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 78/161 (48%), Gaps = 27/161 (16%)
Query: 55 ERKAVTVRGSKSNRKKRTPEV----HKRYERKRRD-KINKKMRALQELIPNCNKVDKASM 109
+++ + V S ++ T EV K +R+RRD K++ KMR LQ+L+PNC+K DK S+
Sbjct: 113 KKRRIQVLSSDDESEEFTREVPSVTRKGSKRRRRDEKMSNKMRKLQQLVPNCHKTDKVSV 172
Query: 110 LEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDG 169
L++ I+Y+K LQ Q+ MMS GV P + T GM A
Sbjct: 173 LDKTIEYMKNLQLQLQMMS-TVGVN-PYFLPATLGFGMHNHMLTA--------------- 215
Query: 170 RMQMGAGCNPAQFLMP-PIPGATAVPGIQMPGFPGQPLPMS 209
M G NPA +MP P+ A P +P F P S
Sbjct: 216 -MASAHGLNPANHMMPSPLIPALNWP---LPPFTNISFPHS 252
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 10/121 (8%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 237 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 296
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFLMPP 186
+SM P L I + P ++FP +G+ D NPA P
Sbjct: 297 LSMKLAAVNPR--LDFNIDNLIAKETFPPCPTNFPAIGLSSDMT-------NPAYLQFNP 347
Query: 187 I 187
+
Sbjct: 348 V 348
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 299 RRGQATDSHSLAERVRREKINQRMKFLQDLVPTCNKVTGKAVMLDEIINYVQSLQHQVEF 358
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 359 LSMKLATVNPKL 370
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 7/117 (5%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 252 RRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 311
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFL 183
+SM P + + +++ + ++FP +G GM M +P+ +L
Sbjct: 312 LSMKLAAVNPRLDFNVDDLFNKEVFPPSCTAANFPSVG-GMSSEM-----TDPSSYL 362
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+KKM+ LQ+++P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 144 RRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEF 203
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAP 155
+SM V P + + +Q + P
Sbjct: 204 LSMKLSVINPELECHIDDLSAKQAYFTGP 232
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 7/117 (5%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 252 RRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 311
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFL 183
+SM P + + +++ + ++FP +G GM M +P+ +L
Sbjct: 312 LSMKLAAVNPRLDFNVDDLFNKEVFPPSCTAANFPSVG-GMSSEM-----TDPSSYL 362
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P CNK V KA ML+E I+Y+++LQ QV
Sbjct: 280 RRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEF 339
Query: 127 MSMGTGVCMPSM---MLPTGIIGMQQMHAVAP-QMSHFP 161
+SM P + LP ++ + +P Q SHFP
Sbjct: 340 LSMKLATVNPQLDFNNLPN-LLAKDMHQSCSPLQSSHFP 377
>gi|115483366|ref|NP_001065353.1| Os10g0556200 [Oryza sativa Japonica Group]
gi|14165335|gb|AAK55467.1|AC069300_22 putative DNA-binding protein [Oryza sativa Japonica Group]
gi|31433458|gb|AAP54971.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113639885|dbj|BAF27190.1| Os10g0556200 [Oryza sativa Japonica Group]
Length = 191
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 77 KRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQV 124
++ KRRD+IN+KM+ LQ+L+PN +K DKASML+E IDYLK LQ QV
Sbjct: 7 RKNNHKRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQV 54
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++MR LQEL+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 209 RRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 268
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGI----GMDGRM-QMGAGCNPAQ 181
+SM P + + I + + + + + P +G+ G G + + A NP
Sbjct: 269 LSMKLATVNPEINIDIDRILAKDL--LQSRDRNTPTLGLNPFAGFQGNIPNLSATTNPQY 326
Query: 182 FLMPPIPGATAVPGIQMPGFPGQPLPMSML 211
+P + + + GF P MS
Sbjct: 327 NPLPQTTLESELQNLYQMGFVSNPSTMSSF 356
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 13/108 (12%)
Query: 34 KRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRA 93
K+ +DT+ P + Y VR R+ + H ER RR+KI+++MR
Sbjct: 144 KQAKDDTQSGEVPKENY--------FHVRA----RRGQATNSHSLAERVRREKISERMRM 191
Query: 94 LQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMML 140
LQEL+P CNK+ KA ML+E I+Y+++LQ QV +SM P + +
Sbjct: 192 LQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELQI 239
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 46/62 (74%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I ++M+ALQEL+P NK D+A+M++E +DY+K L+ QV ++
Sbjct: 166 RRGQATDPHSIAERLRRERIAERMKALQELVPTANKTDRAAMIDEIVDYVKFLRLQVKVL 225
Query: 128 SM 129
SM
Sbjct: 226 SM 227
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P CNK V KA ML+E I+Y+++LQ QV
Sbjct: 77 RRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEF 136
Query: 127 MSMGTGVCMPSM---MLPTGIIGMQQMHAVAP-QMSHFP 161
+SM P + LP ++ + +P Q SHFP
Sbjct: 137 LSMKLATVNPQLDFNNLPN-LLAKDMHQSCSPLQSSHFP 174
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 305 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 364
Query: 127 MSMGTGVCMPSMMLP-TGIIGMQ--QMHAVAPQMSHFPP 162
+SM P M G++ Q+ A + + FPP
Sbjct: 365 LSMKLATVNPQMDFNLEGLLAKDALQLRAGSSSTTPFPP 403
>gi|242084066|ref|XP_002442458.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
gi|241943151|gb|EES16296.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
Length = 340
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
Query: 56 RKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAID 115
RKA S+S+ E H E++RR KIN++++ LQ+L+P C+K ++AS L++ I
Sbjct: 153 RKAPAGGSSRSHHG----EAHNLTEKRRRHKINERLKTLQQLVPGCSKSNQASTLDQTIH 208
Query: 116 YLKTLQFQVMMMSMG 130
Y+K+LQ QV MS+G
Sbjct: 209 YMKSLQHQVQAMSVG 223
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+KKM+ LQ+++P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 128 RRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEF 187
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAV 153
+SM V P + + +Q A
Sbjct: 188 LSMKLSVINPELECHIDDLSAKQFQAY 214
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+KKM+ LQ+++P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 128 RRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEF 187
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAV 153
+SM V P + + +Q A
Sbjct: 188 LSMKLSVINPELECHIDDLSAKQFQAY 214
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 306 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 365
Query: 127 MSMGTGVCMPSMMLP-TGIIGMQ--QMHAVAPQMSHFPP 162
+SM P M G++ Q+ A + + FPP
Sbjct: 366 LSMKLATVNPQMDFNLEGLLAKDALQLRAGSSSTTPFPP 404
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P CNK V KA ML+E I+Y+++LQ QV
Sbjct: 282 RRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEF 341
Query: 127 MSMGTGVCMPSM---MLPTGIIGMQQMHAVAP-QMSHFP 161
+SM P + LP ++ + +P Q SHFP
Sbjct: 342 LSMKLATVNPQLDFNNLPN-LLAKDMHQSCSPLQSSHFP 379
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 306 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 365
Query: 127 MSMGTGVCMPSMMLP-TGIIGMQ--QMHAVAPQMSHFPP 162
+SM P M G++ Q+ A + + FPP
Sbjct: 366 LSMKLATVNPQMDFNLEGLLAKDALQLRAGSSSTTPFPP 404
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 43/60 (71%), Gaps = 3/60 (5%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK---VDKASMLEEAIDYLKTLQFQV 124
R+ + + H ER RR++I ++M+ALQEL+PN NK DKASML+E IDY+K LQ QV
Sbjct: 241 RRGQATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFLQLQV 300
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 214 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVAGKAGMLDEIINYVQSLQRQVEF 273
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRM 171
+SM P + + +++ Q FP +G+ +D M
Sbjct: 274 LSMKLAAVNPRLDFNLDELFTKEVFPSCAQ--SFPNIGMPLDMSM 316
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 55 ERKAVT-VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEA 113
E+ +VT V+G K + Y RKRR+KIN++++ LQ L+PN KVD ++MLEEA
Sbjct: 156 EKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEA 215
Query: 114 IDYLKTLQFQVMMMS 128
+ Y+K LQ Q+ ++S
Sbjct: 216 VHYVKFLQLQIKLLS 230
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+KKM+ LQ+++P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 140 RRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEF 199
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAV 153
+SM V P + + +Q A
Sbjct: 200 LSMKLSVINPELECHIDDLSAKQFQAY 226
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSM 138
Y RKRR++IN+++R LQ+L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S + M +
Sbjct: 251 YARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLS-SDDLWMYAP 309
Query: 139 MLPTGI-IGMQQ 149
+ G+ IG+QQ
Sbjct: 310 IAYNGMDIGLQQ 321
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSM 138
Y RKRR++IN+++R LQ+L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S + M +
Sbjct: 251 YARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLS-SDDLWMYAP 309
Query: 139 MLPTGI-IGMQQ 149
+ G+ IG+QQ
Sbjct: 310 IAYNGMDIGLQQ 321
>gi|414868828|tpg|DAA47385.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 327
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 46/66 (69%)
Query: 63 GSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQF 122
G S+R+ E H E++RR KIN++++ LQ+++P C+K ++AS L++ I Y+K+LQ
Sbjct: 168 GGGSSRRSHHGEAHNLTEKRRRHKINERLKTLQQIVPGCSKSNQASTLDQTIHYMKSLQH 227
Query: 123 QVMMMS 128
QV MS
Sbjct: 228 QVQAMS 233
>gi|414868827|tpg|DAA47384.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 339
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 45/66 (68%)
Query: 63 GSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQF 122
G S+R+ E H E++RR KIN++ + LQ+++P C+K ++AS L++ I Y+K+LQ
Sbjct: 171 GGGSSRRSHHGEAHNLTEKRRRHKINERFKTLQQIVPGCSKSNQASTLDQTIHYMKSLQH 230
Query: 123 QVMMMS 128
QV MS
Sbjct: 231 QVQAMS 236
>gi|242084064|ref|XP_002442457.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
gi|241943150|gb|EES16295.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
Length = 353
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%)
Query: 66 SNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVM 125
S+R+ E H E++RR KIN++++ LQ+L+P C+K ++AS L++ I Y+K+LQ QV
Sbjct: 187 SSRRSHHGEGHNLTEKRRRHKINERLKTLQKLVPGCSKSNQASTLDQTIHYMKSLQQQVQ 246
Query: 126 MMSMG 130
MS+G
Sbjct: 247 AMSVG 251
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 55 ERKAVT-VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEA 113
E+ +VT V+G K + Y RKRR+KIN++++ LQ L+PN KVD ++MLEEA
Sbjct: 156 EKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEA 215
Query: 114 IDYLKTLQFQVMMMS 128
+ Y+K LQ Q+ ++S
Sbjct: 216 VHYVKFLQLQIKLLS 230
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+KKM+ LQ+++P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 144 RRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEF 203
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHA 152
+SM V P + + +Q A
Sbjct: 204 LSMKLSVINPELECHIDDLSAKQFQA 229
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+KKM+ LQ+++P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 144 RRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEF 203
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAV 153
+SM V P + + +Q A
Sbjct: 204 LSMKLSVINPELECHIDDLSAKQFQAY 230
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+KKM+ LQ+++P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 144 RRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEF 203
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAV 153
+SM V P + + +Q A
Sbjct: 204 LSMKLSVINPELECHIDDLSAKQFQAY 230
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+LIP CNKV KA ML+E I+Y+++LQ QV
Sbjct: 195 RRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQVEF 254
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMD 168
+SM P + + +++ Q FP +GI D
Sbjct: 255 LSMKLAAVNPGLDFNIDELFAKEVFPSCAQ--SFPNIGIPSD 294
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++MR LQEL+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 272 RRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 331
Query: 127 MSMGTGVCMPSM------MLPTGIIGMQQMHAVAP-----QMSHFPPMGIGMDGRMQMGA 175
+SM P + +L I+ + H + SH P G G + A
Sbjct: 332 LSMKLATVNPELNFDVDRILSKDILQSRIGHGIGAYGPGINSSHTFPNG-SFHGTL---A 387
Query: 176 GCNPAQFLMPPIP 188
G + PP+P
Sbjct: 388 GMSSTSSQFPPLP 400
>gi|357159196|ref|XP_003578371.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 372
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 34 KRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRA 93
+R + +G + Q + + R V VR R+ + + H ER RR+KI KM+
Sbjct: 150 ERGRKQAKGKSSKSKQADDEPPRDYVHVRA----RRGQATDSHSLAERVRREKITIKMKM 205
Query: 94 LQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPT 142
LQ+L+P CNKV KA ML+E I+Y+++LQ QV +SM P + T
Sbjct: 206 LQDLVPGCNKVIGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFST 255
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+KKM+ LQ+++P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 144 RRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEF 203
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAV 153
+SM V P + + +Q A
Sbjct: 204 LSMKLSVINPELECHIDDLSAKQFQAY 230
>gi|414587589|tpg|DAA38160.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 49/71 (69%), Gaps = 7/71 (9%)
Query: 56 RKAVTVRGSKSNRKKRTPEVHKR----YERKRRDKINKKMRALQELIPNCNKVDKASMLE 111
+ +VT R +K K T ++ R Y++ RR KI +KM+ALQ LIPN NK+DKASML
Sbjct: 205 KNSVTKRQTK---KSLTASIYARSIQGYKQLRRSKIKEKMKALQSLIPNSNKIDKASMLH 261
Query: 112 EAIDYLKTLQF 122
EAI+Y KTLQ+
Sbjct: 262 EAIEYPKTLQY 272
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++MR LQEL+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 266 RRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 325
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 326 LSMKLATVNPEL 337
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 44/60 (73%), Gaps = 3/60 (5%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV---DKASMLEEAIDYLKTLQFQV 124
R+ + + H ER RR++I ++M+ALQEL+PN NK+ DKASML+E IDY+K LQ QV
Sbjct: 253 RRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQLQV 312
>gi|357151466|ref|XP_003575800.1| PREDICTED: putative transcription factor bHLH086-like [Brachypodium
distachyon]
Length = 256
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
Y +KRR++IN+K+R LQ+LIPN KVD ++MLEEA+ Y+K LQ Q+ ++S
Sbjct: 177 YAKKRRERINEKLRVLQQLIPNGTKVDISTMLEEAVQYVKFLQLQIKVLS 226
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 13/125 (10%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P+CNKV KA ML+E I+Y+++LQ QV
Sbjct: 35 RRGQATDSHSLAERVRREKISERMKLLQDLVPSCNKVTGKAVMLDEIINYVQSLQRQVEF 94
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGA-GCNPAQFLMP 185
+SM P M + P+ + P + A G NPA F P
Sbjct: 95 LSMKLSTVNPQMEF--------DVDNFLPKDDNEP---CSLPATAYTAAEGANPAAFCYP 143
Query: 186 PIPGA 190
P P A
Sbjct: 144 PSPEA 148
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+LIP CNKV KA ML+E I+Y+++LQ QV
Sbjct: 195 RRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQVEF 254
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMD 168
+SM P + + +++ Q FP +GI D
Sbjct: 255 LSMKLAAVNPRLDFNIDELFAKEVFPSCAQ--SFPNIGIPSD 294
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+K+M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 356 RRGQATDSHSLAERVRREKISKRMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 415
Query: 127 MSMGTGVCMPSM 138
+SM P M
Sbjct: 416 LSMKLATVNPRM 427
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%), Gaps = 6/62 (9%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV------DKASMLEEAIDYLKTLQ 121
R+ + + H ER RR++I ++M+ALQEL+PN NKV DKASML+E IDY+K LQ
Sbjct: 288 RRGQATDPHSIAERLRRERIAERMKALQELVPNANKVIHPTLTDKASMLDEIIDYVKFLQ 347
Query: 122 FQ 123
Q
Sbjct: 348 LQ 349
>gi|297788272|ref|XP_002862272.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297795123|ref|XP_002865446.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297307602|gb|EFH38530.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311281|gb|EFH41705.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 8/106 (7%)
Query: 39 DTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELI 98
D E + K L+RKA + +G S+ P+ Y RKRR++IN +++ LQ L+
Sbjct: 114 DDENALGLVSNTSKSLKRKAKSNKGIASD-----PQ--SLYARKRRERINDRLKTLQSLV 166
Query: 99 PNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGI 144
PN KVD ++MLE+A+ Y+K LQ Q+ ++S + M +++ G+
Sbjct: 167 PNGTKVDISTMLEDAVHYVKFLQLQIKLLS-SDDLWMYALLAHNGL 211
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++MR LQEL+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 268 RRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 327
Query: 127 MSMGTGVCMPSMML 140
+SM P + +
Sbjct: 328 LSMKLATVNPELNI 341
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 9/136 (6%)
Query: 18 SLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHK 77
S GA +NNP + E+ G + K +A R+ + H
Sbjct: 233 SSGAEDNNPTTKGKAAQSSSENGGGRKQQGKESATKPPAEAPKDYIHVRARRGEATDSHS 292
Query: 78 RYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMMMSMGTGVC-- 134
ER RR+KI+++M+ LQ+L+P CNK V KA ML+E I+Y+++LQ QV +SM
Sbjct: 293 LAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 352
Query: 135 ------MPSMMLPTGI 144
+P+++LP I
Sbjct: 353 QLDFNSLPNLLLPKDI 368
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 13/108 (12%)
Query: 34 KRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRA 93
K+ E++ P + Y + VR R+ + H ER RR+KI+++MR
Sbjct: 223 KQAKENSHSGEAPKENY--------IHVRA----RRGQATNSHSLAERVRREKISERMRL 270
Query: 94 LQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMML 140
LQEL+P CNK+ KA ML+E I+Y+++LQ QV +SM P + +
Sbjct: 271 LQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNI 318
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSM 138
Y RKRR++IN+++R LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S + M +
Sbjct: 238 YARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS-SEDLWMYAP 296
Query: 139 MLPTGI-IGMQQMHAVAPQ 156
+ G+ IG+ + P+
Sbjct: 297 IAYNGMDIGLDHLKLTTPR 315
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 41 EGSACPCDQYEKK-LERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIP 99
+G +C + E + A+ G + + Y RKRR++IN+++R LQ L+P
Sbjct: 239 DGQSCSSNMSEDDNTSKSALNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVP 298
Query: 100 NCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
N KVD ++MLEEA++Y+K LQ Q+ ++S
Sbjct: 299 NGTKVDISTMLEEAVNYVKFLQLQIKLLS 327
>gi|218186081|gb|EEC68508.1| hypothetical protein OsI_36777 [Oryza sativa Indica Group]
gi|222616287|gb|EEE52419.1| hypothetical protein OsJ_34535 [Oryza sativa Japonica Group]
Length = 258
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Query: 58 AVTVRGSKSNR--KKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAID 115
+V ++ S ++R K+ + + Y ++RR++IN+++R LQ+L+PN KVD ++MLEEA+
Sbjct: 158 SVVLKQSDNSRGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQ 217
Query: 116 YLKTLQFQVMMMS 128
Y+K LQ Q+ ++S
Sbjct: 218 YVKFLQLQIKLLS 230
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 14/103 (13%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P CNK V KA ML+E I+Y+++LQ QV
Sbjct: 283 RRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEF 342
Query: 127 MSMGTGVCMPSM-------MLPTGIIGMQQMHAVAP-QMSHFP 161
+SM P + +LP I + P Q SHFP
Sbjct: 343 LSMKLATVNPQLDFNNLPNLLPKDI-----HQSCGPLQNSHFP 380
>gi|77552099|gb|ABA94896.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 246
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Query: 58 AVTVRGSKSNR--KKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAID 115
+V ++ S ++R K+ + + Y ++RR++IN+++R LQ+L+PN KVD ++MLEEA+
Sbjct: 146 SVVLKQSDNSRGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQ 205
Query: 116 YLKTLQFQVMMMS 128
Y+K LQ Q+ ++S
Sbjct: 206 YVKFLQLQIKLLS 218
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 50/70 (71%), Gaps = 2/70 (2%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSM 138
Y RKRR++IN+++R LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S + M +
Sbjct: 278 YARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS-SEDLWMYAP 336
Query: 139 MLPTGI-IGM 147
++ GI IG+
Sbjct: 337 IVYNGINIGL 346
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 26/158 (16%)
Query: 33 LKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMR 92
LK++ +D+E E+ + + VR R+ + H ER RR+KI+++MR
Sbjct: 211 LKQKKDDSES--------EEGSKENFIHVRA----RRGQATNSHSLAERVRREKISERMR 258
Query: 93 ALQELIPNCN-KVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMH 151
LQEL+P C+ K KA ML+E I+Y+++LQ QV +SM P + ++Q+
Sbjct: 259 LLQELVPGCDKKTGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPQLNF-----NVEQIC 313
Query: 152 AVAPQMSHFPPMGIGMDGRMQMGAGCNPA-QFLMPPIP 188
+ + H P G G M NP+ QF PP+P
Sbjct: 314 SKDSHIGHGPIGGYGASISMP-----NPSTQF--PPMP 344
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%)
Query: 57 KAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDY 116
KA+ + G + + Y RKRR++IN+++R LQ L+PN KVD ++MLEEA+ Y
Sbjct: 257 KALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHY 316
Query: 117 LKTLQFQVMMMS 128
+K LQ Q+ ++S
Sbjct: 317 VKFLQLQIKLLS 328
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI ++M+ LQ L+P+CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 261 RRGQATDSHSLAERVRREKIGERMKLLQSLVPSCNKITGKALMLDEIINYVQSLQRQVEF 320
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVA 154
+SM P + L I ++M+ +A
Sbjct: 321 LSMKLSTMNPQLELDEQCIPSKEMNQMA 348
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 20/127 (15%)
Query: 3 AGKCIEPPV-PSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTV 61
AGK P+ P + CS SN +TF K ED+ KA+ +
Sbjct: 193 AGKRKTKPLKPQKTCCSDDESNGG---DTFLSKEDGEDS----------------KALNL 233
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
G + + Y RKRR++IN+++R LQ L+PN KVD ++MLEEA+ Y+K LQ
Sbjct: 234 NGKTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQ 293
Query: 122 FQVMMMS 128
Q+ ++S
Sbjct: 294 LQIKLLS 300
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 10/90 (11%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSM 138
Y RKRR++IN+++R LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S + M +
Sbjct: 278 YARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS-SDDLWMYAP 336
Query: 139 MLPTGI-IGMQQMHAVAPQMSHFPPMGIGM 167
+ GI IG+ +S P GI M
Sbjct: 337 IAYNGINIGL--------DLSISPTKGISM 358
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%)
Query: 57 KAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDY 116
KA+ + G + + Y RKRR++IN+++R LQ L+PN KVD ++MLEEA+ Y
Sbjct: 258 KALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHY 317
Query: 117 LKTLQFQVMMMS 128
+K LQ Q+ ++S
Sbjct: 318 VKFLQLQIKLLS 329
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+KKM+ LQ+++P C KV KA ML+E I+Y+++LQ QV
Sbjct: 144 RRGEATDRHSLAERARREKISKKMKCLQDIVPGCTKVTGKAGMLDEIINYVQSLQQQVEF 203
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHA 152
+SM V P + + +Q A
Sbjct: 204 LSMKLSVLNPELEFHINELSTKQFQA 229
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 20/127 (15%)
Query: 3 AGKCIEPPV-PSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTV 61
AGK P+ P + CS SN +TF K ED+ KA+ +
Sbjct: 193 AGKRKTKPLKPQKTCCSDDESNGG---DTFLSKEDGEDS----------------KALNL 233
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
G + + Y RKRR++IN+++R LQ L+PN KVD ++MLEEA+ Y+K LQ
Sbjct: 234 NGKTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQ 293
Query: 122 FQVMMMS 128
Q+ ++S
Sbjct: 294 LQIKLLS 300
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 16/104 (15%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P CNK V KA ML+E I+Y+++LQ QV
Sbjct: 255 RRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEF 314
Query: 127 MSMGTGVCMPSM-------MLPTGIIGMQQMH-AVAP-QMSHFP 161
+SM P + +LP + MH + P Q SHFP
Sbjct: 315 LSMKLATVNPQLDFNNLPNLLP------KDMHQSCGPLQNSHFP 352
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KAS+L+E I+Y+++LQ QV
Sbjct: 129 RRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVEF 188
Query: 127 MSM 129
+SM
Sbjct: 189 LSM 191
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSM 138
Y RKRR++IN+++R LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S + M +
Sbjct: 221 YARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLS-SDDLWMYAP 279
Query: 139 MLPTGI-IGMQQMHA 152
+ G+ IG+ ++ A
Sbjct: 280 LAYNGMDIGLDKLTA 294
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 10/120 (8%)
Query: 13 SSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLE--RKAVTVRGSKSNRKK 70
SS++ ++G A N N K E EG+ + K E + + VR R+
Sbjct: 90 SSAITTIGKKRGRKARNVSNSK---EGVEGTKSKKQKRGSKEEPPKDYIHVRA----RRG 142
Query: 71 RTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSM 129
+ + H ER RR+KI+++MR LQ L+P C+KV KA ML+E I+Y++TLQ QV +SM
Sbjct: 143 QATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQNQVEFLSM 202
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++MR LQEL+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 243 RRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 302
Query: 127 MSMGTGVCMPSMM 139
+SM P +
Sbjct: 303 LSMKLATVNPELY 315
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KAS+L+E I+Y+++LQ QV
Sbjct: 131 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEF 190
Query: 127 MSMGTGVCMPSMMLPTGIIGM 147
+SM M+ GI+
Sbjct: 191 LSMKLEAVNSHMI--NGIVAF 209
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 16/104 (15%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P CNK V KA ML+E I+Y+++LQ QV
Sbjct: 255 RRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEF 314
Query: 127 MSMGTGVCMPSM-------MLPTGIIGMQQMH-AVAP-QMSHFP 161
+SM P + +LP + MH + P Q SHFP
Sbjct: 315 LSMKLATVNPQLDFNNLPNLLP------KDMHQSCGPLQNSHFP 352
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 4/115 (3%)
Query: 55 ERKAVT-VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEA 113
E+ +VT V+G K + Y RKRR+KIN++++ LQ L+PN KVD ++MLEEA
Sbjct: 156 EKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEA 215
Query: 114 IDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMD 168
+ Y+K LQ Q+ + + G + S L II Q+ + + P G+D
Sbjct: 216 VHYVKFLQLQIKVCRLLKGFFVFSQNL---IITHVQLLSSDDLWMYAPLAYNGLD 267
>gi|334184231|ref|NP_001189527.1| transcription factor bHLH84 [Arabidopsis thaliana]
gi|330251239|gb|AEC06333.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 341
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 70/127 (55%), Gaps = 7/127 (5%)
Query: 3 AGKCIEPPV-PSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTV 61
AGK P+ P + CS SN +TF K ED E S + + R A T
Sbjct: 193 AGKRKTKPLKPQKTCCSDDESNGG---DTFLSK---EDGEDSKALNLNGKTRASRGAATD 246
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
S R K+ +VH +KRR++IN+++R LQ L+PN KVD ++MLEEA+ Y+K LQ
Sbjct: 247 PQSLYARLKQLNKVHCMMVQKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQ 306
Query: 122 FQVMMMS 128
Q+ ++S
Sbjct: 307 LQIKLLS 313
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 38 EDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRT---------PEVHKRYERKRRDKIN 88
+D G AC Q + G+ ++ K+T E Y RKRR++IN
Sbjct: 158 DDDGGYACVDTQSSSSCTSEDGNFEGNTNSSSKKTCARASRGAATEPQSLYARKRRERIN 217
Query: 89 KKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+++R LQ L+PN KVD ++MLEEA Y+K LQ Q+ ++S
Sbjct: 218 ERLRILQNLVPNGTKVDISTMLEEAAQYVKFLQLQIKLLS 257
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++MR LQEL+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 207 RRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 266
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGI----GMDGRM-QMGAGCNPAQ 181
+SM P + + I + + + + + P +G+ G G + + NP
Sbjct: 267 LSMKLATVNPEINIDIDRILAKDL--LQSRDRNTPTLGLNPFSGFQGTIPNLSTTTNPQY 324
Query: 182 FLMPPIPGATAVPGIQMPGFPGQPLPMSML 211
+P + + + GF P MS
Sbjct: 325 NPLPQTTLESELQNLYQMGFVSNPTTMSSF 354
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++MR LQEL P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 209 RRGQATNSHSLAERVRREKISERMRLLQELAPGCNKITGKAVMLDEIINYVQSLQQQVEF 268
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGI----GMDGRM-QMGAGCNPAQ 181
+SM P + + I + + + + + P +G+ G G + + A NP
Sbjct: 269 LSMKLATVNPEINIDIDRILAKDL--LQSRDRNTPTLGLNPFAGFQGNIPNLSATTNPQY 326
Query: 182 FLMPPIPGATAVPGIQMPGFPGQPLPMSML 211
+P + + + GF P MS
Sbjct: 327 NPLPQTTLESELQNLYQMGFVSNPSTMSSF 356
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++MR LQEL+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 167 RRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEF 226
Query: 127 MSM 129
+SM
Sbjct: 227 LSM 229
>gi|414877782|tpg|DAA54913.1| TPA: hypothetical protein ZEAMMB73_144255 [Zea mays]
Length = 304
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 40/50 (80%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
Y RKRR++IN++++ LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S
Sbjct: 227 YARKRRERINERLKVLQSLVPNGTKVDMSTMLEEAVHYVKFLQLQIRLLS 276
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 11/151 (7%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 148 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 207
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFLMPP 186
+SM P L I ++FP IGM M NP+ P
Sbjct: 208 LSMKLAAVNPR--LDFNIDNFLAKEVFPACAANFPT--IGMSSEM-----TNPSYLHYDP 258
Query: 187 IPGATAVPGIQMPGFPGQPLPMSMLRTPLGL 217
I A G++M P + + P+ +
Sbjct: 259 IQ-QVATCGVEMGINPAEIALRRTISAPVSI 288
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++MR LQEL+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 167 RRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEF 226
Query: 127 MSM 129
+SM
Sbjct: 227 LSM 229
>gi|357115803|ref|XP_003559675.1| PREDICTED: uncharacterized protein LOC100838948 [Brachypodium
distachyon]
Length = 307
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 44/60 (73%)
Query: 69 KKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
++ T + Y RKRR++IN++++ LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S
Sbjct: 222 RQSTTDPQSLYARKRRERINERLKVLQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 281
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 375 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 434
Query: 127 MSMGTGVCMPSM 138
+SM P M
Sbjct: 435 LSMKLATVNPRM 446
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%)
Query: 57 KAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDY 116
KA+ + G + + Y RKRR++IN+++R LQ L+PN KVD ++MLEEA+ Y
Sbjct: 255 KALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHY 314
Query: 117 LKTLQFQVMMMS 128
+K LQ Q+ ++S
Sbjct: 315 VKFLQLQIKLLS 326
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 24/164 (14%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 374 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 433
Query: 127 MSMGTGVCMPSMMLPT-GIIGMQQMH--AVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFL 183
+SM P + G++ +H AV F P +
Sbjct: 434 LSMKLATVNPRLDFNIEGLLAKDILHSRAVPSSTLAFSP------------------DMI 475
Query: 184 MPPIPGATAVPGIQMPGFPGQPLPMSMLRTPLGLMHKTNPVAGV 227
M P T+ PG+ FPG +LR + + P++GV
Sbjct: 476 MAYPPFNTSQPGLIQASFPGMESHSDVLRRTIS--SQLTPLSGV 517
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 349 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 408
Query: 127 MSMGTGVCMPSM 138
+SM P M
Sbjct: 409 LSMKLATVNPRM 420
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%)
Query: 57 KAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDY 116
KA+ + G + + Y RKRR++IN+++R LQ L+PN KVD ++MLEEA+ Y
Sbjct: 258 KALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHY 317
Query: 117 LKTLQFQVMMMS 128
+K LQ Q+ ++S
Sbjct: 318 VKFLQLQIKLLS 329
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 23/133 (17%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++MR LQEL+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 164 RRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEF 223
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFLMP- 185
+SM P + +F + GR ++G C+PA MP
Sbjct: 224 LSMKIAASNP--------------------VVNFDIVEDLFGGR-RLGQACSPAAATMPM 262
Query: 186 PIPGATAVPGIQM 198
PI G +QM
Sbjct: 263 PIHGQMDTSCLQM 275
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSM 138
Y RKRR+KIN+++R LQ L+PN KVD ++MLE+AI Y+K LQ Q+ ++S + M +
Sbjct: 212 YARKRREKINERLRTLQNLVPNGTKVDISTMLEDAIHYVKFLQLQIKLLS-SDDMWMYAP 270
Query: 139 MLPTGI-IGMQQMHAVAP 155
+ G+ IG+ ++P
Sbjct: 271 IAYNGLDIGVNLNQKISP 288
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++MR LQEL+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 235 RRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 294
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 295 LSMKLATVNPDV 306
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
Y RKRR+KIN+++R LQ L+PN KVD ++MLE+AI Y+K LQ Q+ ++S
Sbjct: 198 YARKRREKINERLRTLQNLVPNGTKVDISTMLEDAIHYVKFLQLQIKLLS 247
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 375 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 434
Query: 127 MSMGTGVCMPSM 138
+SM P M
Sbjct: 435 LSMKLATVNPRM 446
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%)
Query: 51 EKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASML 110
+ + + A+ G + + Y RKRR++IN+++R LQ L+PN KVD ++ML
Sbjct: 247 DDNISKSALNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTML 306
Query: 111 EEAIDYLKTLQFQVMMMS 128
EEA++Y+K LQ Q+ ++S
Sbjct: 307 EEAVNYVKFLQLQIKLLS 324
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 259 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 318
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFLMPP 186
+SM P L I ++FP IGM M NP+ P
Sbjct: 319 LSMKLAAVNPR--LDFNIDNFLAKEVFPACAANFPT--IGMSSEM-----TNPSYLHYDP 369
Query: 187 IPGATAVPGIQM 198
I A G++M
Sbjct: 370 IQ-QVATCGVEM 380
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 15/132 (11%)
Query: 34 KRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRA 93
K+ +D++ S P ++Y + VR R+ + H ER RR+KI+++MR
Sbjct: 322 KQGKQDSQPSDAPKEEY--------IHVRA----RRGQATNSHSLAERVRREKISERMRL 369
Query: 94 LQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQM-- 150
LQ+L+P C+KV KA ML+E I+Y+++LQ QV +SM P + + ++
Sbjct: 370 LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLTKEFIQ 429
Query: 151 HAVAPQMSHFPP 162
P + FPP
Sbjct: 430 SKAGPSLFGFPP 441
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++M+ LQEL+P C+K+ KAS L+E I+Y+++LQ QV
Sbjct: 135 RRGQATDSHSLAERVRRERISERMKYLQELVPGCSKIMGKASTLDEIINYVQSLQRQVEF 194
Query: 127 MSMGTGVCMPSMMLPTG-IIGMQQMH 151
+SM P M L + +++H
Sbjct: 195 LSMKLAAAEPRMHLSSSNFFDREEVH 220
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KAS+L+E I+Y+++LQ QV
Sbjct: 127 RRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVEF 186
Query: 127 MSM 129
+SM
Sbjct: 187 LSM 189
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 15/132 (11%)
Query: 34 KRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRA 93
K+ +D++ S P ++Y + VR R+ + H ER RR+KI+++MR
Sbjct: 322 KQGKQDSQPSDAPKEEY--------IHVRA----RRGQATNSHSLAERVRREKISERMRL 369
Query: 94 LQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQM-- 150
LQ+L+P C+KV KA ML+E I+Y+++LQ QV +SM P + + ++
Sbjct: 370 LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLTKEFIQ 429
Query: 151 HAVAPQMSHFPP 162
P + FPP
Sbjct: 430 SKAGPSLFGFPP 441
>gi|413920361|gb|AFW60293.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 241
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Query: 59 VTVRGSKSNR--KKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDY 116
+ ++ S S+R + + + Y ++RR++IN+K+R LQ+LIPN KVD ++MLEEA+ Y
Sbjct: 159 IVLKQSTSSRGPSRSSKDSQSLYAKRRRERINEKLRTLQQLIPNGTKVDMSTMLEEAVQY 218
Query: 117 LKTLQFQVMMM 127
+K LQ Q+ ++
Sbjct: 219 VKFLQLQIKLL 229
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 240 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 299
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQ 181
+SM P L + A +FP +G+ D NPAQ
Sbjct: 300 LSMKLAAVNPR--LDFNFDNLFAREAFPACSVNFPTIGMSSDMTNPAYLQFNPAQ 352
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 63/116 (54%), Gaps = 15/116 (12%)
Query: 24 NNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKR 83
N+P T + KR + + S P D Y + VR R+ + H ER R
Sbjct: 276 NSPGNKTNSGKR--QGKQSSDLPKDGY--------IHVRA----RRGQATNSHSLAERVR 321
Query: 84 RDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSM 138
R+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV +SM P M
Sbjct: 322 REKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQM 377
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 266 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 325
Query: 127 MSMGTGVCMPSM 138
+SM P M
Sbjct: 326 LSMKLATVNPRM 337
>gi|4218118|emb|CAA22972.1| putative protein [Arabidopsis thaliana]
gi|7269735|emb|CAB81468.1| putative protein [Arabidopsis thaliana]
Length = 478
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
Query: 51 EKKLERKAVT-----VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD 105
E KL+ + T RGS S ++ RT E+H ER+RR+KIN+KM+ LQ+LIP CNKV+
Sbjct: 230 ESKLKAREETHGTEEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKVE 289
Query: 106 KASMLEEAIDYLKTLQFQVMMMSMGT 131
S+ + L+FQ MM T
Sbjct: 290 SDSV----STLISLLKFQRWMMLSST 311
>gi|22327541|ref|NP_680385.1| transcription factor bHLH139 [Arabidopsis thaliana]
gi|122213858|sp|Q3E7L7.1|BH139_ARATH RecName: Full=Transcription factor bHLH139; AltName: Full=Basic
helix-loop-helix protein 139; Short=AtbHLH139;
Short=bHLH 139; AltName: Full=Transcription factor EN
116; AltName: Full=bHLH transcription factor bHLH139
gi|332007536|gb|AED94919.1| transcription factor bHLH139 [Arabidopsis thaliana]
Length = 223
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 7/90 (7%)
Query: 39 DTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELI 98
D E + K L+RKA RG S+ P+ Y RKRR++IN +++ LQ L+
Sbjct: 113 DDEKALGLVSNTSKSLKRKAKANRGIASD-----PQ--SLYARKRRERINDRLKTLQSLV 165
Query: 99 PNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
PN KVD ++MLE+A+ Y+K LQ Q+ ++S
Sbjct: 166 PNGTKVDISTMLEDAVHYVKFLQLQIKLLS 195
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNK V KA ML+E I+Y+++LQ QV
Sbjct: 177 RRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEF 236
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 237 LSMKLATVNPQL 248
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 40/50 (80%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
Y RKRR++IN+++R LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S
Sbjct: 261 YARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 310
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+KKM+ LQ+L+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 193 RRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 252
Query: 127 MSMGTGVCMP 136
+S+ P
Sbjct: 253 LSLKLATMNP 262
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNK V KA ML+E I+Y+++LQ QV
Sbjct: 177 RRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEF 236
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 237 LSMKLATVNPQL 248
>gi|102139852|gb|ABF70010.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 302
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 47 CDQYEKKLERKAVTVRGSKSNRKKRTPEV--HKRYERKRRDKINKKMRALQELIPNCNKV 104
C Y + + +A + R R P Y ++RR++IN ++R LQ L+PN KV
Sbjct: 184 CCSYSSEEDSQAFQADLNAKTRSNRWPATDPQSLYAKQRRERINARLRTLQNLVPNGTKV 243
Query: 105 DKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQ 148
D ++MLEEA+ Y+K LQ Q+ ++S + M + ++ +G+I Q
Sbjct: 244 DISTMLEEAVRYVKFLQLQIKLLS-SDELWMYAPVVHSGMIDGQ 286
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 40/50 (80%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
Y RKRR++IN+++R LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S
Sbjct: 198 YARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 247
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+KKM+ LQ+L+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 193 RRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 252
Query: 127 MSMGTGVCMP 136
+S+ P
Sbjct: 253 LSLKLATMNP 262
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%)
Query: 69 KKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+ T E Y RKRR++IN++++ LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S
Sbjct: 230 RSATTEPQSIYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIRLLS 289
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 45/59 (76%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPS 137
Y RKRR++IN+++R LQ L+PN KVD ++MLEEA++Y+K LQ Q+ + ++G + + S
Sbjct: 288 YARKRRERINERLRVLQNLVPNGTKVDISTMLEEAVNYVKFLQTQIKVCTIGDIIYLLS 346
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 58/90 (64%), Gaps = 10/90 (11%)
Query: 42 GSACPCDQYEK---KLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELI 98
G + DQ + KL+ K+ + RGS ++ P+ Y R+RR+KIN++++ LQ L+
Sbjct: 227 GGSSSLDQKDSTTIKLKGKSRSERGSATD-----PQ--SIYARRRREKINERLKILQNLV 279
Query: 99 PNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
PN KVD ++MLEEA+ Y+K LQ Q+ ++S
Sbjct: 280 PNGTKVDISTMLEEAVQYVKFLQLQIKLLS 309
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P CNK V KA ML+E I+Y+++LQ QV
Sbjct: 267 RRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEF 326
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 327 LSMKLATVNPQL 338
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 40/50 (80%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
Y RKRR++IN++++ LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S
Sbjct: 230 YARKRRERINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLS 279
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 14/145 (9%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 256 RRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 315
Query: 127 MSMGTGVCMPSMMLPT-GIIGMQQMH---------AVAPQMSHFPPMGIGMDGRMQMGAG 176
+SM P + L G++ + +P+M H P + + G +Q GA
Sbjct: 316 LSMKLATVNPRLDLNIEGLLSKDLLRFPGVPSSSLGFSPEMMH-PQLQLSQPGLIQGGAA 374
Query: 177 --CNPAQFLMPPIPGATAVPGIQMP 199
NP F +A G QMP
Sbjct: 375 GMANPDVFRRIMQAQLSAKDGSQMP 399
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P CNK V KA ML+E I+Y+++LQ QV
Sbjct: 267 RRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEF 326
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 327 LSMKLATVNPQL 338
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 40/50 (80%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
Y RKRR++IN+++R LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S
Sbjct: 210 YARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 259
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 15/151 (9%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 30 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 89
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQM--------HAVAPQMSHFPPMGIGMDGR----MQMG 174
+SM P M + + + H + P S P G + +Q G
Sbjct: 90 LSMKMATVNPKMEINMETFLSKDIFQSRGSMPHGLYPLDSSTPAFPYGYQSQQGLALQDG 149
Query: 175 AGCN-PAQFLMPPIPGAT-AVPGIQMPGFPG 203
N +QF M P+ A +Q+P G
Sbjct: 150 MSRNAESQFSMNPLNAALRRSSSMQLPALDG 180
>gi|26185713|emb|CAD58595.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 175
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 37/45 (82%)
Query: 84 RDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
R++IN++M+ LQEL+P C K DK SMLE+ I+Y+K+LQ Q+ MMS
Sbjct: 1 RERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQLQIQMMS 45
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 41/50 (82%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
Y RKRR++IN++++ LQ L+PN KVD ++MLEEA++Y+K LQ Q+ ++S
Sbjct: 273 YARKRRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLS 322
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++MR LQEL+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 167 RRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEF 226
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 227 LSMKIAASNP 236
>gi|326496517|dbj|BAJ94720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 261
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 56 RKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAI 114
R V VR R+ + + H ER RR+KI KM+ LQ+L+P CNKV KA ML+E I
Sbjct: 63 RDYVHVRA----RRGQATDSHSLAERVRREKITLKMKMLQDLVPGCNKVIGKALMLDEII 118
Query: 115 DYLKTLQFQVMMMSMGTGVCMPSMMLPT 142
+Y+++LQ QV +SM P + T
Sbjct: 119 NYVQSLQQQVEFLSMKLSTVNPQLDFDT 146
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 7/90 (7%)
Query: 56 RKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAI 114
R V VR R+ + + H ER RR++I+++M+ LQ+L+P CNKV KA ML+E I
Sbjct: 189 RDYVHVRA----RRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 244
Query: 115 DYLKTLQFQVMMMSMGTGVCMPSMM--LPT 142
+Y+++LQ QV +SM P + LPT
Sbjct: 245 NYVQSLQRQVEFLSMKLATVNPLDLSNLPT 274
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
Query: 127 MSMGTGVCMPSMMLPTGIIGM 147
+SM M + GI G
Sbjct: 210 LSMKLEAVNSRMNITPGIEGF 230
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 38 EDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQEL 97
++ GS+ P + KA RGS + + Y RKRR++IN++++ LQ L
Sbjct: 234 QELNGSSSPKGSAALNSKDKARASRGSAT-------DPQSLYARKRRERINERLKILQNL 286
Query: 98 IPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+PN KVD ++MLEEA++Y+K LQ Q+ ++S
Sbjct: 287 VPNGTKVDISTMLEEAVEYVKFLQLQIKLLS 317
>gi|242069235|ref|XP_002449894.1| hypothetical protein SORBIDRAFT_05g025230 [Sorghum bicolor]
gi|241935737|gb|EES08882.1| hypothetical protein SORBIDRAFT_05g025230 [Sorghum bicolor]
Length = 242
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 43/55 (78%)
Query: 74 EVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
++ Y ++RR++IN+++R LQ+LIPN KVD ++MLEEA+ Y+K LQ Q+ ++S
Sbjct: 160 DLQSLYAKRRRERINERLRTLQQLIPNGTKVDMSTMLEEAVQYVKFLQLQIKLLS 214
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 342 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 401
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQ 181
+SM M L + + + ++ P +D Q G P Q
Sbjct: 402 LSMKLASVNTRMDLSIENLISKDVFQSNNSLATLPNAVFPLDSSAQTFYGHQPQQ 456
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 40/50 (80%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
Y RKRR++IN++++ LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S
Sbjct: 238 YARKRRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 287
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 38 EDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQEL 97
++ GS+ P + KA RGS + + Y RKRR++IN++++ LQ L
Sbjct: 235 QELNGSSSPKGSAALNSKDKARASRGSAT-------DPQSLYARKRRERINERLKILQNL 287
Query: 98 IPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+PN KVD ++MLEEA++Y+K LQ Q+ ++S
Sbjct: 288 VPNGTKVDISTMLEEAVEYVKFLQLQIKLLS 318
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 64/133 (48%), Gaps = 32/133 (24%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++MR LQEL+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 146 RRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEF 205
Query: 127 MSMGTGVCMP--SMMLPTGIIGMQ--------------------QMHAVAPQMSHFPPM- 163
+SM P S + + G Q Q+ QMSH P M
Sbjct: 206 LSMKIAASNPVVSFDIVEDLFGRQLKQSRRSPAAALPAMALPAGQLEPSCLQMSHMPQMH 265
Query: 164 --------GIGMD 168
G G+D
Sbjct: 266 PSAAANSTGFGLD 278
>gi|224108413|ref|XP_002314839.1| predicted protein [Populus trichocarpa]
gi|222863879|gb|EEF01010.1| predicted protein [Populus trichocarpa]
Length = 103
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
R R KRT + RD+I K+RALQELIPNC+K D+ SMLE+A++YLK L+
Sbjct: 12 RKKHEQRPKRTRSAEMHNVSRPRDRIKGKLRALQELIPNCHKQDRPSMLEDAVEYLKALK 71
Query: 122 FQVMMMSMGTGVCMPSM 138
QV ++++ + ++
Sbjct: 72 LQVEVITLSVIAVLQAL 88
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 41 EGSACPCDQYEKKLERK-----AVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQ 95
+G + P ++ + KL A+ G ++ + Y R RR++IN++++ LQ
Sbjct: 182 QGWSSPTNESKHKLSSVNFAGPALNTNGKPRAKRGSATDPQSVYARHRRERINERLKTLQ 241
Query: 96 ELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
L+PN KVD +MLEEAI Y+K LQ QV M+S
Sbjct: 242 HLVPNGAKVDIVTMLEEAIHYVKFLQLQVNMLS 274
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 38 EDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQEL 97
E+ + SA P Y + VR R+ + + H ER RR+KI+KKM++LQ+L
Sbjct: 187 ENQQTSALPKTDY--------IHVRA----RRGQATDSHSLAERARREKISKKMKSLQDL 234
Query: 98 IPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVCMP 136
+P CNK+ +A ML+E I+Y+++LQ QV +SM P
Sbjct: 235 VPGCNKITGRAGMLDEIINYVQSLQRQVEFLSMKLAALNP 274
>gi|357120420|ref|XP_003561925.1| PREDICTED: uncharacterized protein LOC100831403 [Brachypodium
distachyon]
Length = 337
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 40/50 (80%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
Y RKRR+KIN++++ LQ L+PN KVD ++MLEEA+ Y+K +Q Q+ ++S
Sbjct: 260 YARKRREKINERLKVLQNLVPNGTKVDISTMLEEAVHYIKFMQLQIKLLS 309
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 40/50 (80%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
Y RKRR++IN+++R LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S
Sbjct: 251 YARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 300
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+++P CNKV KAS+L+E I+Y+++LQ QV
Sbjct: 126 RRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVEF 185
Query: 127 MSM-----GTGVCMPSMMLPTGIIGM 147
+SM V ++ PT G+
Sbjct: 186 LSMKLEAINAHVSNATVAFPTKDFGV 211
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 376 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 435
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 436 LSMKLAAVNPRL 447
>gi|293332391|ref|NP_001168665.1| uncharacterized protein LOC100382453 [Zea mays]
gi|223950025|gb|ACN29096.1| unknown [Zea mays]
gi|414877116|tpg|DAA54247.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 398
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 1 LDAGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVT 60
++ K E V + SLCS ++ ++R E SA D + E +
Sbjct: 296 METKKACEVAVATPSLCSGNG-------ESWREQKRKSQAECSASQDDDLDD--ESGGMR 346
Query: 61 VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKA 107
G + ++ RT EVH ER+RRD+IN+KMRALQELIPNCNKV ++
Sbjct: 347 GSGGRGTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKVRRS 393
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 7/90 (7%)
Query: 56 RKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAI 114
R V VR R+ + + H ER RR++I+++M+ LQ+L+P CNKV KA ML+E I
Sbjct: 189 RDYVHVRA----RRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 244
Query: 115 DYLKTLQFQVMMMSMGTGVCMPSMM--LPT 142
+Y+++LQ QV +SM P + LPT
Sbjct: 245 NYVQSLQRQVEFLSMKLATVNPLDLSNLPT 274
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 7/90 (7%)
Query: 56 RKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAI 114
R V VR R+ + + H ER RR++I+++M+ LQ+L+P CNKV KA ML+E I
Sbjct: 189 RDYVHVRA----RRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 244
Query: 115 DYLKTLQFQVMMMSMGTGVCMPSMM--LPT 142
+Y+++LQ QV +SM P + LPT
Sbjct: 245 NYVQSLQRQVEFLSMKLATVNPLDLSNLPT 274
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++MR LQEL+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 82 RRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 141
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 142 LSMKLATVNPDV 153
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 20/207 (9%)
Query: 12 PSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSN---- 67
PS + + ++N A ++ N +D + P K + K K +
Sbjct: 182 PSEVMGADQVQSSNVAADSANESVHSKDKGEESSPATTTTGKSKGKGAKESSEKEDYIHV 241
Query: 68 --RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQV 124
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 242 RARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 301
Query: 125 MMMSMGTGVCMPSMMLPT-GIIGMQQMH---------AVAPQMSHFPPMGIGMDGRMQMG 174
+SM P + L G++ + +P+M H P + + G MQ G
Sbjct: 302 EFLSMKLATVNPRLDLNIEGLLSKDLLRFPGVSSSSIGFSPEMMH-PQLQLSQPGLMQGG 360
Query: 175 AGCNPAQFLMPPIPGAT--AVPGIQMP 199
A Q + I A A G QMP
Sbjct: 361 AAGMANQDVFRRIMQAQLGAKDGSQMP 387
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 372 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 431
Query: 127 MSMGTGVCMPSMML 140
+SM P M +
Sbjct: 432 LSMKLSSVNPRMEI 445
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 194 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEF 253
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGI--GMDGR---MQ--------- 172
+SM P + + +++ + F MG+ G++ +Q
Sbjct: 254 LSMKLATVNPRLDFNIDDLFEKEVFPNCDANASFQAMGMSTGLNSNNPYLQFNSPQQFVP 313
Query: 173 ---MGAGCNPAQF-LMPPIPGATAVPG--IQMPGFPGQPLPMSMLRTPLGLMHKTN 222
+ AG NP+ L I ++P I F Q LP ++ ++ N
Sbjct: 314 YGGLDAGMNPSDMGLRRSISAPVSIPQTFIDSSCFSQQILPSTIWEGDFQNLYNFN 369
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++MR LQEL+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 51 RRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAFMLDEIINYIQSLQQQVEF 110
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAP 155
+SM P + + I + + A P
Sbjct: 111 LSMKLATVNPDINIDIDRILAKDVRAQNP 139
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNK V KA ML+E I+Y+++LQ QV
Sbjct: 159 RRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEF 218
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 219 LSMKLATVNPEL 230
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 64/133 (48%), Gaps = 32/133 (24%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++MR LQEL+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 146 RRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEF 205
Query: 127 MSMGTGVCMP--SMMLPTGIIGMQ--------------------QMHAVAPQMSHFPPM- 163
+SM P S + + G Q Q+ QMSH P M
Sbjct: 206 LSMKIAASNPVVSFDIVEDLFGRQLKQSRRSPAAALPAMALPAGQLEPSCLQMSHMPQMH 265
Query: 164 --------GIGMD 168
G G+D
Sbjct: 266 PSAAANSTGFGLD 278
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 19/158 (12%)
Query: 42 GSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNC 101
GS P ++Y + VR R+ + H ER RR+KI+++M+ LQ+L+P C
Sbjct: 139 GSDQPKEEY--------IHVRA----RRGQATNSHSLAERVRREKISERMKFLQDLVPGC 186
Query: 102 NKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPT-GIIGMQQMHAVAPQMSH 159
+KV KA ML+E I+Y+++LQ QV +SM P + L G++ Q+
Sbjct: 187 SKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLAKDVFDPKILQLHA 246
Query: 160 FPPMGIGMDGRMQMGA-GCNPAQFLMPPIPGATAVPGI 196
PP + M M +P+Q + P TA PG+
Sbjct: 247 VPPSSLAFSLEMPMAYPPSHPSQAGLIP----TAFPGM 280
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 9/115 (7%)
Query: 33 LKRRYEDTEGS--ACPCDQYEKKLERKAVTVRGSKSN----RKKR--TPEVHKRYERKRR 84
L + Y++ + S + Q K+ + + SK N R KR H ER RR
Sbjct: 194 LPKEYDEKKNSGPSSRSRQAVKEAKDNSSGAEASKENYIHVRAKRGQATNSHSLAERVRR 253
Query: 85 DKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSM 138
++I+++MR LQEL+P CNK+ KA ML+E I+Y+++LQ QV +SM P +
Sbjct: 254 ERISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEL 308
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNK V KA ML+E I+Y+++LQ QV
Sbjct: 159 RRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEF 218
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 219 LSMKLATVNPEL 230
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 170 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 229
Query: 127 MSMGTGVCMPSM 138
+SM P++
Sbjct: 230 LSMKLATVNPAL 241
>gi|168024075|ref|XP_001764562.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684140|gb|EDQ70544.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+ +M+ LQ L+P C++V KA MLEE I+Y+K+LQ Q+
Sbjct: 22 RRGQATNSHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEIINYVKSLQRQIEF 81
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGI 165
+SM P L T + G+ +M A ++ PMG+
Sbjct: 82 LSMKLAAVDPR--LDTNVEGLLKMEVCAVRLVSV-PMGV 117
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNK V KA ML+E I+Y+++LQ QV
Sbjct: 159 RRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEF 218
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 219 LSMKLATVNPEL 230
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 257 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEF 316
Query: 127 MSMGTGVCMPSMML--PTGIIGMQQMHAVAPQMSH 159
+SM + + +I +QM+ ++H
Sbjct: 317 LSMKLASVNTTRVDFNVDSLISSKQMYQSGTSLTH 351
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 194 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEF 253
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGI--GMDGRMQMGAGCNPAQFL 183
+SM P + + +++ + F MG+ G++ +P QF+
Sbjct: 254 LSMKLATVNPRLDFNIDDLFEKEVFPNCDANASFQAMGMSTGLNSNNPYLQFNSPQQFV 312
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNK V KA ML+E I+Y+++LQ QV
Sbjct: 161 RRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEF 220
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 221 LSMKLATVNPEL 232
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 39/50 (78%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
Y RKRR++IN+++R LQ L+PN KVD ++MLEEA Y+K LQ Q+ ++S
Sbjct: 210 YARKRRERINERLRILQNLVPNGTKVDISTMLEEAAQYVKFLQLQIKLLS 259
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 40/50 (80%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
Y RKRR++IN+++R LQ+L+PN KVD ++MLEEA Y+K LQ Q+ ++S
Sbjct: 204 YARKRRERINERLRILQKLVPNGTKVDISTMLEEAAQYVKFLQLQIKLLS 253
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNK V KA ML+E I+Y+++LQ QV
Sbjct: 160 RRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEF 219
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 220 LSMKLATVNPQL 231
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 64/133 (48%), Gaps = 32/133 (24%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++MR LQEL+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 146 RRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEF 205
Query: 127 MSMGTGVCMP--SMMLPTGIIGMQ--------------------QMHAVAPQMSHFPPM- 163
+SM P S + + G Q Q+ QMSH P M
Sbjct: 206 LSMKIAASNPVVSFDIVEDLFGRQLKQSRRSPAAALPAMALPAGQLEPSCLQMSHMPQMH 265
Query: 164 --------GIGMD 168
G G+D
Sbjct: 266 PSAAANSTGFGLD 278
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNK V KA ML+E I+Y+++LQ QV
Sbjct: 160 RRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEF 219
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 220 LSMKLATVNPQL 231
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNK V KA ML+E I+Y+++LQ QV
Sbjct: 160 RRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEF 219
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 220 LSMKLATVNPQL 231
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P C+K+ KA ML+E I+Y+++LQ Q+
Sbjct: 72 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLDEIINYVQSLQRQIEF 131
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAP 155
+SM P + ++G + + +P
Sbjct: 132 LSMKLAAVNPRLDYSYDLLGKDMLQSRSP 160
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 219 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEF 278
Query: 127 MSMGTGVCMPSMML--PTGIIGMQQMHAVAPQMSH 159
+SM + + +I +QM+ ++H
Sbjct: 279 LSMKLASVNTTRVDFNVDSLISSKQMYQSGTSLTH 313
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++MR LQ L+P C+KV KA ML+E I+Y++TLQ QV
Sbjct: 139 RRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEF 198
Query: 127 MSM 129
+SM
Sbjct: 199 LSM 201
>gi|357130181|ref|XP_003566729.1| PREDICTED: uncharacterized protein LOC100831834 [Brachypodium
distachyon]
Length = 298
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
++ + + H ER RR+KI++KM LQ L+P C+KV KA ML+E I Y+++LQ QV
Sbjct: 160 KRGQARDSHSLAERVRREKISEKMLLLQSLVPGCDKVTGKAMMLDEIISYVQSLQNQVEF 219
Query: 127 MSMGTGVCMPSMMLPTGI-IGM 147
+SM P MM G+ IGM
Sbjct: 220 LSMKLASLNPMMMYEFGVDIGM 241
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 281 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEF 340
Query: 127 MSMGTGVCMPSMMLPTGII 145
+SM P L G
Sbjct: 341 LSMKLSTVDPRRELDVGCF 359
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 6/94 (6%)
Query: 48 DQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DK 106
+ YE + E + + VR R+ + H ER RR+KI+++M+ LQ+L+P C+KV K
Sbjct: 236 ETYESQKE-EYIHVRA----RRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGK 290
Query: 107 ASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMML 140
A ML+E I+Y+++LQ QV +SM P + L
Sbjct: 291 AVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDL 324
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 261 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEF 320
Query: 127 MSMGTGVCMPSMMLPTGII 145
+SM P L G
Sbjct: 321 LSMKLSTVDPRRELDVGCF 339
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNK V KA ML+E I+Y+++LQ QV
Sbjct: 160 RRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEF 219
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 220 LSMKLATVNPQL 231
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 40/50 (80%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
Y RKRR++IN++++ LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S
Sbjct: 229 YARKRRERINERLKTLQTLVPNGTKVDMSTMLEEAVHYVKFLQLQIKVLS 278
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 172 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 231
Query: 127 MSM 129
+SM
Sbjct: 232 LSM 234
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 207 RRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEF 266
Query: 127 MSMGTGVCMPSMM--LPTGIIGMQQMHAVAPQMS 158
+SM P LPT ++ + A P S
Sbjct: 267 LSMKLATVNPLDFSNLPT-LLQKDMLQACGPSAS 299
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KAS+L+E I+Y++ LQ QV
Sbjct: 139 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEF 198
Query: 127 MSM 129
+SM
Sbjct: 199 LSM 201
>gi|218192293|gb|EEC74720.1| hypothetical protein OsI_10445 [Oryza sativa Indica Group]
Length = 324
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 40/50 (80%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
Y RKRR++IN++++ LQ LIPN KVD ++MLEEA+ Y+K LQ Q+ ++S
Sbjct: 246 YARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLS 295
>gi|222624408|gb|EEE58540.1| hypothetical protein OsJ_09836 [Oryza sativa Japonica Group]
Length = 324
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 40/50 (80%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
Y RKRR++IN++++ LQ LIPN KVD ++MLEEA+ Y+K LQ Q+ ++S
Sbjct: 246 YARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLS 295
>gi|108706746|gb|ABF94541.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 324
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 40/50 (80%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
Y RKRR++IN++++ LQ LIPN KVD ++MLEEA+ Y+K LQ Q+ ++S
Sbjct: 246 YARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLS 295
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 17/147 (11%)
Query: 9 PPVPSSSLCSLGASNNNPACNTFNLKRR--------YEDTEGSACPCDQYEKKLERKAVT 60
P + S CSLG++ + A + K + E+ + Q++ +++KA
Sbjct: 108 PGIQGSCPCSLGSTQDMDASWGKSRKHKRSNVGLKGLEEKKARRVVLHQHDDDVKKKAKE 167
Query: 61 VRGSK--------SNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLE 111
G + R+ + + H ER RR+KI+++M+ LQ L+P C+KV KA ML+
Sbjct: 168 AAGGEPPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLD 227
Query: 112 EAIDYLKTLQFQVMMMSMGTGVCMPSM 138
E I Y+++LQ QV +SM P M
Sbjct: 228 EIISYVQSLQNQVEFLSMKLASLSPLM 254
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 62/133 (46%), Gaps = 32/133 (24%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++MR LQEL+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 153 RRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEF 212
Query: 127 MSMGTGV----------------------CMPSMMLPTGIIGMQ---------QMHAVAP 155
+SM C P+ LP + M QM A
Sbjct: 213 LSMKIAAANPVVNFNIVDDLFGGRRMSQPCGPAAALPAMTLPMHHGQLDPSCLQMSNTAM 272
Query: 156 QMSHFPPMGIGMD 168
Q P G G+D
Sbjct: 273 QQMQQPAAGFGLD 285
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KAS+L+E I+Y++ LQ QV
Sbjct: 139 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEF 198
Query: 127 MSM 129
+SM
Sbjct: 199 LSM 201
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M LQ+L+P CNKV KAS+L+E I+Y++ LQ QV
Sbjct: 134 RRGQATDSHSLAERARREKISERMNILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEF 193
Query: 127 MSM 129
+SM
Sbjct: 194 LSM 196
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 10/96 (10%)
Query: 35 RRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRAL 94
++ ED D Y+ + +A R+ + + H ER RR+KI+++M+ L
Sbjct: 237 KKSEDNGDKTKSIDPYKDYIHVRA---------RRGQATDSHSLAERVRREKISERMKLL 287
Query: 95 QELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSM 129
Q+L+P CNKV KA ML+E I+Y+++LQ QV +SM
Sbjct: 288 QDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 323
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 197 RRGQATDSHSLAERVRREKISERMNYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEF 256
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 257 LSMKLAAVNPRL 268
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 7/88 (7%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 308 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQQQVEF 367
Query: 127 MSMGTGVCMPSM------MLPTGIIGMQ 148
+SM P + +LP I+ Q
Sbjct: 368 LSMKLATVNPHVDFNMERLLPKDILQHQ 395
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 207 RRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEF 266
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 267 LSMKLATVNP 276
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNK + KA +L+E I+Y+++LQ QV
Sbjct: 122 RRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEF 181
Query: 127 MSM 129
+SM
Sbjct: 182 LSM 184
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KAS+L+E I+Y++ LQ QV
Sbjct: 137 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEF 196
Query: 127 MSM 129
+SM
Sbjct: 197 LSM 199
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 207 RRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEF 266
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 267 LSMKLATVNP 276
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 196 RRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEF 255
Query: 127 MSM 129
+SM
Sbjct: 256 LSM 258
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 293 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVRSLQRQVEF 352
Query: 127 MSM 129
+SM
Sbjct: 353 LSM 355
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 389 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 448
Query: 127 MSM 129
+SM
Sbjct: 449 LSM 451
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 204
Query: 127 MSMGTGVCMPSMM-----LPTGIIGMQQMHAVA 154
+SM M P +G+Q A A
Sbjct: 205 LSMKLEAVNSRMNHTVEGFPLKDLGVQTFDAAA 237
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 22/166 (13%)
Query: 34 KRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRA 93
K+ + ++GS P ++Y + VR R+ + H ER RR+KI+++M+
Sbjct: 350 KQGKQGSQGSDQPKEEY--------IHVRA----RRGQATNSHSLAERVRREKISERMKF 397
Query: 94 LQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPT-GIIGMQQMH 151
LQ+L+P C+KV KA ML+E I+Y+++LQ QV +SM P + G++ +
Sbjct: 398 LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDILQ 457
Query: 152 AVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFLMPPIPGATAVPGIQ 197
+ A PP + M M PA P TA PG++
Sbjct: 458 SRA-----VPPSSLAFSSEMPM---AYPALHQSQPGLIPTAFPGME 495
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++MR LQEL+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 156 RRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEF 215
Query: 127 MSM 129
+SM
Sbjct: 216 LSM 218
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
++ + H ER RR+KIN++M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 128 KRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEF 187
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 188 LSMKLSTISPEL 199
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 17/147 (11%)
Query: 9 PPVPSSSLCSLGASNNNPACNTFNLKRR--------YEDTEGSACPCDQYEKKLERKAVT 60
P + S CSLG++ + A + K + E+ + Q++ +++KA
Sbjct: 108 PGIQGSCPCSLGSTQDMDASWGKSRKHKRSNVGLKGLEEKKARRVVLHQHDDDVKKKAKE 167
Query: 61 VRGSK--------SNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLE 111
G + R+ + + H ER RR+KI+++M+ LQ L+P C+KV KA ML+
Sbjct: 168 AAGGEPPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLD 227
Query: 112 EAIDYLKTLQFQVMMMSMGTGVCMPSM 138
E I Y+++LQ QV +SM P M
Sbjct: 228 EIISYVQSLQNQVEFLSMKLASLNPLM 254
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSM 138
Y RKRR++IN++++ LQ L+PN KVD ++MLEEA+ Y+ LQ Q+ ++S + M +
Sbjct: 286 YARKRRERINERLKILQNLVPNGTKVDISTMLEEAVHYVNFLQLQIKLLS-SDDLWMYAP 344
Query: 139 MLPTGI-IGMQQ 149
+ GI IG+ Q
Sbjct: 345 LAYNGIDIGLNQ 356
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 160 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 219
Query: 127 MSMGTGVCMPSMM-----LPTGIIGMQQMHAVA 154
+SM M P +G+Q A A
Sbjct: 220 LSMKLEAVNSRMNHTVEGFPLKDLGVQTFDAAA 252
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 388 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 447
Query: 127 MSM 129
+SM
Sbjct: 448 LSM 450
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 193 RRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEF 252
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 253 LSMKLATVNP 262
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI ++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 259 RRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 318
Query: 127 MSMGTGVCMPSMML 140
+SM P + L
Sbjct: 319 LSMKLSTVNPRLEL 332
>gi|147845457|emb|CAN83346.1| hypothetical protein VITISV_042277 [Vitis vinifera]
Length = 489
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 35/43 (81%)
Query: 87 INKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
IN+KM+ALQ LIPN NK DKASML+EAI+YLK LQ QV + +
Sbjct: 196 INEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQNLEL 238
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
++ + H ER RR+KIN++M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 631 KRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEF 690
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 691 LSMKLSTISPEL 702
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 12/114 (10%)
Query: 35 RRYEDTEGSACPCDQYEKKLERKA-------VTVRGSKSNRKKRTPEVHKRYERKRRDKI 87
+YE S P K+ + A + VR R+ + H ER RR+KI
Sbjct: 220 EKYEPKRSSVAPGKSSRKQAKDNAGSPKEEYIHVRA----RRGQATNSHSLAERVRREKI 275
Query: 88 NKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMML 140
+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV +SM P++ L
Sbjct: 276 SERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDL 329
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 154 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 213
Query: 127 MSM 129
+SM
Sbjct: 214 LSM 216
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
++ + H ER RR+KIN++M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 631 KRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEF 690
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 691 LSMKLSTISPEL 702
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 20/146 (13%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M LQ+L+P CN++ KA ML+E I+Y+++LQ QV
Sbjct: 194 RRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEF 253
Query: 127 MSMGTGVCMPSM-----------MLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGA 175
+SM P M M+ G Q ++A+A P +
Sbjct: 254 LSMKLATVNPRMEFNANASLSTEMIQPGESLTQSLYAMACSEQRLPSAYYSL-------- 305
Query: 176 GCNPAQFLMPPIPGATAVPGIQMPGF 201
G N +F P + PGF
Sbjct: 306 GKNMPRFSDTQFPSNDGFVHTETPGF 331
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 375 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 434
Query: 127 MSM 129
+SM
Sbjct: 435 LSM 437
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 39/47 (82%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVM 125
Y R+RR++IN+++RALQ L+PN KVD +MLEEAI+Y+K LQ Q++
Sbjct: 251 YARQRRERINERLRALQGLVPNGAKVDIVTMLEEAINYVKFLQLQLL 297
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 242 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 301
Query: 127 MSMGTGVCMPSMML 140
+SM P + L
Sbjct: 302 LSMKLSTVNPRLKL 315
>gi|223946943|gb|ACN27555.1| unknown [Zea mays]
Length = 386
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
Query: 1 LDAGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVT 60
++ K E V + SLCS ++ ++R E SA D + E +
Sbjct: 291 METKKACEVAVATPSLCSGNG-------ESWREQKRKSQAECSASQDDDLDD--ESGGMR 341
Query: 61 VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV 104
G + ++ RT EVH ER+RRD+IN+KMRALQELIPNCNK+
Sbjct: 342 GSGGRGTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKL 385
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 361 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 420
Query: 127 MSM 129
+SM
Sbjct: 421 LSM 423
>gi|414877869|tpg|DAA55000.1| TPA: putative clathrin heavy chain family protein [Zea mays]
Length = 898
Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 39/49 (79%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
Y RKRR++IN++++ LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++
Sbjct: 227 YARKRRERINERLKVLQSLVPNGTKVDMSTMLEEAVHYVKFLQLQIRLI 275
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
++ + H ER RR+KIN++M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 631 KRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEF 690
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 691 LSMKLSTISPEL 702
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVC 134
H ER RR+KIN++M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ QV +SM
Sbjct: 129 HSLAERFRREKINERMKHLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSAV 188
Query: 135 MPSM 138
P +
Sbjct: 189 SPEL 192
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 71/136 (52%), Gaps = 28/136 (20%)
Query: 14 SSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSN------ 67
SS + SNN+ N KR GS+ D + K E +A +V G+KS+
Sbjct: 52 SSTTTANLSNNDSGSN----KRM--KVGGSSFENDGF--KAEAEASSVGGNKSSEQSNKP 103
Query: 68 -------------RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEA 113
R+ + + H ER RR+KI+++M+ LQ+L P CNKV KA +L+E
Sbjct: 104 CEAPKPDYIHVRARRGQATDSHSLAERARREKISERMKILQDLAPGCNKVIGKALVLDEI 163
Query: 114 IDYLKTLQFQVMMMSM 129
I+Y+++LQ QV +SM
Sbjct: 164 INYIQSLQRQVEFLSM 179
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 251 RRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 310
Query: 127 MSMGTGVCMPSMML 140
+SM P + L
Sbjct: 311 LSMKLATVNPRLDL 324
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KAS+L+E I+Y++ LQ QV
Sbjct: 115 RRGQATDSHSIAERARREKISERMKMLQDLVPGCNKVIGKASVLDEIINYIQALQRQVEF 174
Query: 127 MSM 129
+SM
Sbjct: 175 LSM 177
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KAS+L+E I+Y++ LQ QV
Sbjct: 62 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEF 121
Query: 127 MSM 129
+SM
Sbjct: 122 LSM 124
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 58 AVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYL 117
A+ G R+ + Y R RR+KIN++++ LQ L+PN KVD +ML+EAI Y+
Sbjct: 435 ALNTNGKPRARRGSATDPQSVYARHRREKINERLKTLQHLVPNGAKVDIVTMLDEAIHYV 494
Query: 118 KTLQFQVMMM 127
+ LQ QV ++
Sbjct: 495 QFLQLQVTLL 504
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 20/146 (13%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M LQ+L+P CN++ KA ML+E I+Y+++LQ QV
Sbjct: 197 RRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEF 256
Query: 127 MSMGTGVCMPSM-----------MLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGA 175
+SM P M M+ G Q ++A+A P +
Sbjct: 257 LSMKLATVNPRMEFNANAALSTEMIQPGESLTQSLYAMACSEQRLPSAYYSL-------- 308
Query: 176 GCNPAQFLMPPIPGATAVPGIQMPGF 201
G N +F P + PGF
Sbjct: 309 GKNMPRFSDTQFPSNDGFVQAETPGF 334
>gi|115454133|ref|NP_001050667.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|50428697|gb|AAT77048.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108709850|gb|ABF97645.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|113549138|dbj|BAF12581.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|125587132|gb|EAZ27796.1| hypothetical protein OsJ_11741 [Oryza sativa Japonica Group]
Length = 310
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 40/50 (80%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
Y RKRR++IN++++ LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S
Sbjct: 235 YARKRRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKFLQLQIKLLS 284
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 255 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 314
Query: 127 MSM 129
+SM
Sbjct: 315 LSM 317
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 353 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 412
Query: 127 MSM 129
+SM
Sbjct: 413 LSM 415
>gi|194695980|gb|ACF82074.1| unknown [Zea mays]
gi|413939375|gb|AFW73926.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 216
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 37/46 (80%)
Query: 91 MRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMP 136
M+ALQ LIPN +K DKASML++AI+YLK LQ QV M+SM G+ +P
Sbjct: 1 MKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQMLSMRNGLYLP 46
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ Q+
Sbjct: 76 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQIEF 135
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAP 155
+SM P + ++G + +P
Sbjct: 136 LSMKLAAVNPRLDYGFDVLGKDLLQLRSP 164
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQEL+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 328 RRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 387
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 388 LSMKLATVNPRL 399
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KAS+L+E I+Y++ LQ QV
Sbjct: 98 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEF 157
Query: 127 MSM 129
+SM
Sbjct: 158 LSM 160
>gi|125544879|gb|EAY91018.1| hypothetical protein OsI_12623 [Oryza sativa Indica Group]
Length = 310
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 40/50 (80%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
Y RKRR++IN++++ LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S
Sbjct: 235 YARKRRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKFLQLQIKLLS 284
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 261 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 320
Query: 127 MSM 129
+SM
Sbjct: 321 LSM 323
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 259 RRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 318
Query: 127 MSMGTGVCMPSMML 140
+SM P + L
Sbjct: 319 LSMKLATVNPRLDL 332
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++MR LQEL+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 149 RRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEF 208
Query: 127 MSMGTGVCMPSMMLPT 142
+SM P + +
Sbjct: 209 LSMKIAASNPVVSFAS 224
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVC 134
H ER RR+KIN++M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ QV +SM
Sbjct: 134 HSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSAI 193
Query: 135 MPSMMLPTGIIGMQQMHAVAPQMSHFPPMGI 165
P + + +Q + S FP +
Sbjct: 194 SPELNCD---LDLQDILCTQDASSAFPGYNV 221
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 261 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 320
Query: 127 MSM 129
+SM
Sbjct: 321 LSM 323
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQEL+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 372 RRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 431
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 432 LSMKLATVNPRL 443
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+++P CNKV KAS+L+E I+Y+++LQ QV
Sbjct: 53 RRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVEF 112
Query: 127 MSM 129
+SM
Sbjct: 113 LSM 115
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 154 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 213
Query: 127 MSM 129
+SM
Sbjct: 214 LSM 216
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 154 RRGQATDSHGLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 213
Query: 127 MSM 129
+SM
Sbjct: 214 LSM 216
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y++ LQ QV
Sbjct: 125 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAVMLDEIINYVQALQCQVEF 184
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 185 LSMKLAAVNPQL 196
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%)
Query: 55 ERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAI 114
+ KA+ + G + + Y RKRR++IN+++R LQ L+PN KV ++MLEEA+
Sbjct: 227 DSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVHISTMLEEAV 286
Query: 115 DYLKTLQFQVMMMS 128
Y+K LQ Q+ ++S
Sbjct: 287 QYVKFLQLQIKLLS 300
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 244 RRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 303
Query: 127 MSMGTGVCMPSMMLPT-GIIGMQQMH---------AVAPQMSHFPPMGIGMDGRMQMGAG 176
+SM P + L G++ + +P+M H P + + G MQ GA
Sbjct: 304 LSMKLATVNPRLDLNIEGLLSKDLLRFPGVSSSSMGFSPEMMH-PQLQLSQPGLMQGGAA 362
Query: 177 C 177
Sbjct: 363 A 363
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 249 RRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 308
Query: 127 MSMGTGVCMPSMML 140
+SM P + L
Sbjct: 309 LSMKLATVNPRLDL 322
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 259 RRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 318
Query: 127 MSMGTGVCMPSMML 140
+SM P + L
Sbjct: 319 LSMKLATVNPRLDL 332
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 149 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 208
Query: 127 MSM 129
+SM
Sbjct: 209 LSM 211
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 17/104 (16%)
Query: 43 SACPCDQYEKKLE---RKAVTVRGSKSN-------------RKKRTPEVHKRYERKRRDK 86
+AC D +E K E R T + S+ R+ + + H ER RR+K
Sbjct: 133 AACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATDSHSLAERARREK 192
Query: 87 INKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMMMSM 129
I+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV +SM
Sbjct: 193 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 236
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+++P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 103 RRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEF 162
Query: 127 MSM 129
+SM
Sbjct: 163 LSM 165
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 142 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 201
Query: 127 MSM 129
+SM
Sbjct: 202 LSM 204
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 154 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 213
Query: 127 MSM 129
+SM
Sbjct: 214 LSM 216
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Query: 47 CDQYEKKLERKAVTVRGSKSN------RKKRTPEVHKRYERKRRDKINKKMRALQELIPN 100
CD K K ++ K + R+ + + H ER RR+KI+++M+ LQ+L+P
Sbjct: 119 CDDVGSKENSKGSEIQNHKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPG 178
Query: 101 CNKV-DKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSM 138
CNK+ KA ML+E I+Y+++LQ QV +SM P +
Sbjct: 179 CNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL 217
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 61/100 (61%), Gaps = 8/100 (8%)
Query: 41 EGSACPCD--QYEKKLER-KAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQEL 97
E + C D + K+LE+ + VR R+ + + H ER RR+KI+++M+ LQ+L
Sbjct: 146 EENNCSNDSSKVTKELEKTDYIHVRA----RRGQATDSHSIAERVRREKISERMKFLQDL 201
Query: 98 IPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVCMP 136
+P C+K+ KA ML+E I+Y+++LQ Q+ +SM V P
Sbjct: 202 VPGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAVVNP 241
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 632 RRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 691
Query: 127 MSMGTGVCMPSMML 140
+SM P + L
Sbjct: 692 LSMKLATVNPRLDL 705
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 94 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEF 153
Query: 127 MSM 129
+SM
Sbjct: 154 LSM 156
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 188 RRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEF 247
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 248 LSMKLATVNP 257
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 154 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 213
Query: 127 MSM 129
+SM
Sbjct: 214 LSM 216
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI ++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 304 RRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 363
Query: 127 MSM 129
+SM
Sbjct: 364 LSM 366
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR +I+++M+ LQ L+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 250 RRGQATDSHSLAERVRRKRISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEF 309
Query: 127 MSMGTGVCMPSMML 140
+SM P + L
Sbjct: 310 LSMKLSTMNPQLDL 323
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 8/113 (7%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ Q+
Sbjct: 175 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEF 234
Query: 127 MSMGTGVCMPSMMLP-TGIIGMQQMHAVAPQMSH-----FPPMG-IGMDGRMQ 172
+SM P + ++ + + AP H +PP+ + G MQ
Sbjct: 235 LSMKLSAVNPVLDFNLESLLAKDALQSSAPTFPHNMSMLYPPVSYLSQTGFMQ 287
>gi|297797231|ref|XP_002866500.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312335|gb|EFH42759.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 282
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI++KM ALQ++IP CNK + KA +L+E I+Y+++LQ QV
Sbjct: 157 RRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEF 216
Query: 127 MSM 129
+SM
Sbjct: 217 LSM 219
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
RK + H ER RR+KI+++M+ LQ+L+P C KV KA ML+E I+Y+++LQ QV
Sbjct: 177 RKGQATNRHSLAERLRREKISERMKLLQDLVPGCTKVTGKAVMLDEIINYVQSLQRQVEF 236
Query: 127 MSMGTGVCMPSMML 140
+SM P + L
Sbjct: 237 LSMKLAAVNPQLGL 250
>gi|218187187|gb|EEC69614.1| hypothetical protein OsI_38988 [Oryza sativa Indica Group]
Length = 271
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 51 EKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASM 109
E ER+ +T ++ R R + H ERKRR KIN+ ++ LQ+L+P C+K ++AS
Sbjct: 102 ESSKERRKIT----RARRSSRYSQTHSLTERKRRCKINENLKTLQQLVPGCDKSNNQAST 157
Query: 110 LEEAIDYLKTLQFQVMMMSMG 130
L++ I Y+K+LQ V MS+G
Sbjct: 158 LDKTIRYMKSLQQHVQAMSVG 178
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVC 134
H ER RR++I+++M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ QV +SM
Sbjct: 257 HSLAERVRRERISERMKFLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEFLSMKLATV 316
Query: 135 MPSMMLPTGIIGMQQMH----AVAPQMSHFPPM 163
P M + I +H AP + P M
Sbjct: 317 YPEMNVQIERILSSDIHHSKGGTAPILGFGPGM 349
>gi|15241896|ref|NP_201067.1| transcription factor bHLH79 [Arabidopsis thaliana]
gi|75311612|sp|Q9LV17.1|BH079_ARATH RecName: Full=Transcription factor bHLH79; AltName: Full=Basic
helix-loop-helix protein 79; Short=AtbHLH79; Short=bHLH
79; AltName: Full=Transcription factor EN 81; AltName:
Full=bHLH transcription factor bHLH079
gi|8809657|dbj|BAA97208.1| unnamed protein product [Arabidopsis thaliana]
gi|18175779|gb|AAL59926.1| unknown protein [Arabidopsis thaliana]
gi|21536811|gb|AAM61143.1| unknown [Arabidopsis thaliana]
gi|21689825|gb|AAM67556.1| unknown protein [Arabidopsis thaliana]
gi|332010247|gb|AED97630.1| transcription factor bHLH79 [Arabidopsis thaliana]
Length = 281
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 8/87 (9%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI++KM ALQ++IP CNK + KA +L+E I+Y+++LQ QV
Sbjct: 156 RRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEF 215
Query: 127 MSMGTGVCM------PSM-MLPTGIIG 146
+SM V P++ + P+G +G
Sbjct: 216 LSMKLEVVNSGASTGPTIGVFPSGDLG 242
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 8/113 (7%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ Q+
Sbjct: 226 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEF 285
Query: 127 MSMGTGVCMPSMMLP-TGIIGMQQMHAVAPQMSH-----FPPMG-IGMDGRMQ 172
+SM P + ++ + + AP H +PP+ + G MQ
Sbjct: 286 LSMKLSAVNPVLDFNLESLLAKDALQSSAPTFPHNMSMLYPPVSYLSQTGFMQ 338
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+ +M+ LQ L+P C++V KA MLEE I+Y+K+LQ Q+
Sbjct: 153 RRGQATDGHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEIINYVKSLQRQIEF 212
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHA 152
+SM P + T + G+ +M A
Sbjct: 213 LSMKLAAVDP--RVDTNVEGLLKMEA 236
>gi|145334163|ref|NP_001078462.1| transcription factor bHLH119 [Arabidopsis thaliana]
gi|218563522|sp|Q8GT73.2|BH119_ARATH RecName: Full=Transcription factor bHLH119; AltName: Full=Basic
helix-loop-helix protein 119; Short=AtbHLH119;
Short=bHLH 119; AltName: Full=Transcription factor EN
104; AltName: Full=bHLH transcription factor bHLH119
gi|332660147|gb|AEE85547.1| transcription factor bHLH119 [Arabidopsis thaliana]
Length = 544
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 50/66 (75%)
Query: 63 GSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQF 122
GS S ++ R ++H ER+RR++IN++M+ LQEL+P C K DK SMLE+ I+Y+K+LQ
Sbjct: 349 GSTSRKRSRAADMHNLSERRRRERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQL 408
Query: 123 QVMMMS 128
Q+ MMS
Sbjct: 409 QIQMMS 414
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 36 RRGQATDSHSLAERVRREKISERMKTLQDLVPGCSKVTGKAMMLDEIINYVQSLQRQVEF 95
Query: 127 MSMGTGVCMPSM 138
+SM P++
Sbjct: 96 LSMKLAAVKPAL 107
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI ++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 304 RRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 363
Query: 127 MSM 129
+SM
Sbjct: 364 LSM 366
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI ++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 302 RRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 361
Query: 127 MSM 129
+SM
Sbjct: 362 LSM 364
>gi|357444405|ref|XP_003592480.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481528|gb|AES62731.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 330
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 40/50 (80%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
Y +KRR++IN++++ LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++S
Sbjct: 252 YAKKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQVQIKLLS 301
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ L+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 9 RRGKATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVEF 68
Query: 127 MSM 129
+SM
Sbjct: 69 LSM 71
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 261 RRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 320
Query: 127 MSMGTGVCMPSM 138
+SM P++
Sbjct: 321 LSMKLASVNPTL 332
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 294 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 353
Query: 127 MSM 129
+SM
Sbjct: 354 LSM 356
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KAS+L+E I+Y+++LQ QV
Sbjct: 131 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEF 190
Query: 127 M 127
M
Sbjct: 191 M 191
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
RK + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 179 RKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQVEF 238
Query: 127 MSMGTGVCMPSMML 140
+SM P + L
Sbjct: 239 LSMKLSAVNPRIDL 252
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 260 RRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 319
Query: 127 MSMGTGVCMPSMMLPTGII 145
+SM P + G++
Sbjct: 320 LSMKLATVNPRLDNIEGLL 338
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 149 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 208
Query: 127 MSM 129
+SM
Sbjct: 209 LSM 211
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 263 RRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 322
Query: 127 MSMGTGVCMPSM 138
+SM P++
Sbjct: 323 LSMKLASVNPTL 334
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+KKM+ LQ+L+P CNK+ +A ML+E I+Y+++LQ QV
Sbjct: 40 RRGQATDSHSLAERARREKISKKMKCLQDLVPGCNKITGRAGMLDEIINYVQSLQRQVEF 99
Query: 127 MSM 129
+SM
Sbjct: 100 ISM 102
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 263 RRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 322
Query: 127 MSMGTGVCMPSM 138
+SM P++
Sbjct: 323 LSMKLASVNPTL 334
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Query: 52 KKLER-KAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASM 109
K+LE+ + VR R+ + + H ER RR+KI+++M+ LQ+L+P C+K+ KA M
Sbjct: 162 KELEKTDYIHVRA----RRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGM 217
Query: 110 LEEAIDYLKTLQFQVMMMSMGTGVCMP 136
L+E I+Y+++LQ Q+ +SM + P
Sbjct: 218 LDEIINYVQSLQRQIEFLSMKLAIVNP 244
>gi|357150524|ref|XP_003575488.1| PREDICTED: transcription factor bHLH84-like [Brachypodium
distachyon]
Length = 178
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
+ K +R + + H Y +KRR +IN+++R LQ+LIPN KVD ++MLEEA+ Y+K L
Sbjct: 94 KNGKKSRAAKDSQSH--YAKKRRQRINERLRILQKLIPNGTKVDISTMLEEAVQYVKFLH 151
Query: 122 FQVMMMS 128
Q+ ++S
Sbjct: 152 LQIKLLS 158
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Query: 52 KKLER-KAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASM 109
K+LE+ + VR R+ + + H ER RR+KI+++M+ LQ+L+P C+K+ KA M
Sbjct: 162 KELEKTDYIHVRA----RRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGM 217
Query: 110 LEEAIDYLKTLQFQVMMMSMGTGVCMP 136
L+E I+Y+++LQ Q+ +SM + P
Sbjct: 218 LDEIINYVQSLQRQIEFLSMKLAIVNP 244
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Query: 52 KKLER-KAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASM 109
K+LE+ + VR R+ + + H ER RR+KI+++M+ LQ+L+P C+K+ KA M
Sbjct: 162 KELEKTDYIHVRA----RRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGM 217
Query: 110 LEEAIDYLKTLQFQVMMMSMGTGVCMP 136
L+E I+Y+++LQ Q+ +SM + P
Sbjct: 218 LDEIINYVQSLQRQIEFLSMKLAIVNP 244
>gi|77556222|gb|ABA99018.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125579480|gb|EAZ20626.1| hypothetical protein OsJ_36241 [Oryza sativa Japonica Group]
Length = 198
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
Y + RR +IN+++R LQELIPN KVD ++MLEEAI Y+K L Q+ ++S
Sbjct: 122 YAKNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKLLS 171
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 59/94 (62%), Gaps = 7/94 (7%)
Query: 39 DTEGSACPCDQYEKKLE--RKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQE 96
+ E +Q ++++E + + VR R+ + + H ER RR+KI+++M+ LQ+
Sbjct: 112 EAESLGTETEQKKQQMEPTKDYIHVRA----RRGQATDSHSLAERARREKISERMKILQD 167
Query: 97 LIPNCNKV-DKASMLEEAIDYLKTLQFQVMMMSM 129
L+P CNKV KA +L+E I+Y+++LQ QV +SM
Sbjct: 168 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 201
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 59/94 (62%), Gaps = 7/94 (7%)
Query: 39 DTEGSACPCDQYEKKLE--RKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQE 96
+ E +Q ++++E + + VR R+ + + H ER RR+KI+++M+ LQ+
Sbjct: 112 EAESLGTETEQKKQQMEPTKDYIHVRA----RRGQATDSHSLAERARREKISERMKILQD 167
Query: 97 LIPNCNKV-DKASMLEEAIDYLKTLQFQVMMMSM 129
L+P CNKV KA +L+E I+Y+++LQ QV +SM
Sbjct: 168 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 201
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 9/94 (9%)
Query: 41 EGSACPCDQYEKKLE----RKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQE 96
E + + +KKL+ + + VR R+ + + H ER RR+KI+++M+ LQ+
Sbjct: 112 EAESLGTETEQKKLQIEPTKDYIHVRA----RRGQATDSHSLAERARREKISERMKILQD 167
Query: 97 LIPNCNKV-DKASMLEEAIDYLKTLQFQVMMMSM 129
L+P CNKV KA +L+E I+Y+++LQ QV +SM
Sbjct: 168 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 201
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 61/103 (59%), Gaps = 11/103 (10%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 167 RRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEF 226
Query: 127 MSMGTGVCMPSMM-----LPTGIIGMQQMHAVA-----PQMSH 159
+SM P L T ++ ++++++A P MSH
Sbjct: 227 LSMKLASVNPMFYDLATDLDTLLVRPEKLNSMASPSPLPSMSH 269
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 141 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 200
Query: 127 MSM 129
+SM
Sbjct: 201 LSM 203
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Query: 52 KKLER-KAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASM 109
K+LE+ + VR R+ + + H ER RR+KI+++M+ LQ+L+P C+K+ KA M
Sbjct: 162 KELEKTDYIHVRA----RRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGM 217
Query: 110 LEEAIDYLKTLQFQVMMMSMGTGVCMP 136
L+E I+Y+++LQ Q+ +SM + P
Sbjct: 218 LDEIINYVQSLQRQIEFLSMKLAIVNP 244
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 58 AVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYL 117
A+ +G K + Y RKRR++I+ ++R LQ L+PN KVD ++MLEEA+ Y+
Sbjct: 233 ALNFKGKTKASKGSATDPQSLYARKRRERIDDRLRILQNLVPNGTKVDISTMLEEAVQYV 292
Query: 118 KTLQFQVMMMS 128
K LQ Q ++S
Sbjct: 293 KFLQLQNKLLS 303
>gi|312281909|dbj|BAJ33820.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 11/92 (11%)
Query: 38 EDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQEL 97
+DTEG D+ E + E G + R+ R +H ER+RRD+IN++MR LQ+L
Sbjct: 143 QDTEG-----DEQETRGEA------GRSNGRRGRAAAIHNESERRRRDRINQRMRTLQKL 191
Query: 98 IPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
+P +K DK S+L++ I++LK LQ QV MS+
Sbjct: 192 LPTASKADKVSILDDVIEHLKQLQAQVQFMSL 223
>gi|125536776|gb|EAY83264.1| hypothetical protein OsI_38473 [Oryza sativa Indica Group]
Length = 198
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
Y + RR +IN+++R LQELIPN KVD ++MLEEAI Y+K L Q+ ++S
Sbjct: 122 YAKNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKLLS 171
>gi|30688981|ref|NP_850368.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|75304461|sp|Q8VZ02.1|BH048_ARATH RecName: Full=Transcription factor bHLH48; AltName: Full=Basic
helix-loop-helix protein 48; Short=AtbHLH48; Short=bHLH
48; AltName: Full=Transcription factor EN 97; AltName:
Full=bHLH transcription factor bHLH048
gi|17529250|gb|AAL38852.1| unknown protein [Arabidopsis thaliana]
gi|20465971|gb|AAM20171.1| unknown protein [Arabidopsis thaliana]
gi|51971465|dbj|BAD44397.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|330255008|gb|AEC10102.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 327
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN +M+ LQEL+P C+K+ A +L+E I++++TLQ QV M
Sbjct: 188 RRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVEM 247
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 248 LSMRLAAVNP 257
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 252 RRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 311
Query: 127 MSMGTGVCMPSM 138
+SM P++
Sbjct: 312 LSMKLASVNPTL 323
>gi|12957703|gb|AAK09221.1|AC084320_8 putative phytochrome interacting factor [Oryza sativa Japonica
Group]
Length = 263
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 43/69 (62%), Gaps = 9/69 (13%)
Query: 36 RYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQ 95
R ED E C + K R+ GSK R+ R EVH ER+RRD+IN+KMRALQ
Sbjct: 194 RSEDAE---CEATEETKSSSRRY----GSK--RRTRAAEVHNLSERRRRDRINEKMRALQ 244
Query: 96 ELIPNCNKV 104
ELIP+CNKV
Sbjct: 245 ELIPHCNKV 253
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 54/83 (65%), Gaps = 5/83 (6%)
Query: 48 DQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-K 106
DQ E++ + + VR R+ + + H ER RR++I+++MR LQ L+P C+KV K
Sbjct: 94 DQMEEEAPQGFIHVRA----RRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGK 149
Query: 107 ASMLEEAIDYLKTLQFQVMMMSM 129
A +L+E I+Y+++LQ QV +SM
Sbjct: 150 ALILDEIINYVQSLQNQVEFLSM 172
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 361 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 420
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 421 LSMKLATVNPRL 432
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 85 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 144
Query: 127 MSM 129
+SM
Sbjct: 145 LSM 147
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 410 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 469
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 470 LSMKLATVNPRL 481
>gi|357444409|ref|XP_003592482.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481530|gb|AES62733.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 157
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 39/49 (79%)
Query: 82 KRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMG 130
+RR++IN+++R LQ L+PN KVD ++MLEEA+ Y+K LQ Q+ ++SM
Sbjct: 86 RRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSMW 134
>gi|224088258|ref|XP_002308393.1| predicted protein [Populus trichocarpa]
gi|222854369|gb|EEE91916.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 33/39 (84%)
Query: 91 MRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
M+ALQEL+PN NK DKASML+E IDY+K LQ QV ++SM
Sbjct: 1 MKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSM 39
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 61 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 120
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 121 LSMKLAAVNPRL 132
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 320 RRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 379
Query: 127 MSMGTGVCMPSM 138
+SM P++
Sbjct: 380 LSMKLASVNPTL 391
>gi|42568685|ref|NP_200935.2| transcription factor PIF7 [Arabidopsis thaliana]
gi|182676517|sp|Q570R7.2|PIF7_ARATH RecName: Full=Transcription factor PIF7; AltName: Full=Basic
helix-loop-helix protein 72; Short=AtbHLH72; Short=bHLH
72; AltName: Full=Phytochrome-interacting factor 7;
AltName: Full=Transcription factor EN 109; AltName:
Full=bHLH transcription factor bHLH072
gi|225879146|dbj|BAH30643.1| hypothetical protein [Arabidopsis thaliana]
gi|332010062|gb|AED97445.1| transcription factor PIF7 [Arabidopsis thaliana]
Length = 366
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 12/104 (11%)
Query: 38 EDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQEL 97
+DTEG D+ E + E G + R+ R +H ER+RRD+IN++MR LQ+L
Sbjct: 144 QDTEG-----DEQETRGEA------GRSNGRRGRAAAIHNESERRRRDRINQRMRTLQKL 192
Query: 98 IPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLP 141
+P +K DK S+L++ I++LK LQ QV MS+ + MM+P
Sbjct: 193 LPTASKADKVSILDDVIEHLKQLQAQVQFMSLRANLPQ-QMMIP 235
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 371 RRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 430
Query: 127 MSMGTGVCMPSM 138
+SM P++
Sbjct: 431 LSMKLASVNPTL 442
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 444 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEN 503
Query: 127 MSM 129
+SM
Sbjct: 504 LSM 506
>gi|62318640|dbj|BAD95106.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 278
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 12/104 (11%)
Query: 38 EDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQEL 97
+DTEG D+ E + E G + R+ R +H ER+RRD+IN++MR LQ+L
Sbjct: 56 QDTEG-----DEQETRGEA------GRSNGRRGRAAAIHNESERRRRDRINQRMRTLQKL 104
Query: 98 IPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLP 141
+P +K DK S+L++ I++LK LQ QV MS+ + MM+P
Sbjct: 105 LPTASKADKVSILDDVIEHLKQLQAQVQFMSLRANLPQQ-MMIP 147
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 79 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 138
Query: 127 MSMGTGVCMPSM 138
+SM P++
Sbjct: 139 LSMKLAAVNPTL 150
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 147 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 206
Query: 127 MSM 129
+SM
Sbjct: 207 LSM 209
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI ++M+ LQ+L+P CNKV KAS+L+E I+Y++ L+ QV
Sbjct: 117 RRGQATDSHSLAERARREKITERMKILQDLVPGCNKVIGKASVLDEIINYVQALERQVEF 176
Query: 127 MSM 129
+SM
Sbjct: 177 LSM 179
>gi|79331774|ref|NP_001032117.1| transcription factor PIF7 [Arabidopsis thaliana]
gi|9757848|dbj|BAB08482.1| unnamed protein product [Arabidopsis thaliana]
gi|45935023|gb|AAS79546.1| At5g61270 [Arabidopsis thaliana]
gi|46367462|emb|CAG25857.1| hypothetical protein [Arabidopsis thaliana]
gi|332010063|gb|AED97446.1| transcription factor PIF7 [Arabidopsis thaliana]
Length = 278
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 12/104 (11%)
Query: 38 EDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQEL 97
+DTEG D+ E + E G + R+ R +H ER+RRD+IN++MR LQ+L
Sbjct: 56 QDTEG-----DEQETRGEA------GRSNGRRGRAAAIHNESERRRRDRINQRMRTLQKL 104
Query: 98 IPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLP 141
+P +K DK S+L++ I++LK LQ QV MS+ + MM+P
Sbjct: 105 LPTASKADKVSILDDVIEHLKQLQAQVQFMSLRANLPQQ-MMIP 147
>gi|32527639|gb|AAP86213.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 277
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 12/104 (11%)
Query: 38 EDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQEL 97
+DTEG D+ E + E G + R+ R +H ER+RRD+IN++MR LQ+L
Sbjct: 56 QDTEG-----DEQETRGEA------GRSNGRRGRAAAIHNESERRRRDRINQRMRTLQKL 104
Query: 98 IPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLP 141
+P +K DK S+L++ I++LK LQ QV MS+ + MM+P
Sbjct: 105 LPTASKADKVSILDDVIEHLKQLQAQVQFMSLRANLPQQ-MMIP 147
>gi|168002647|ref|XP_001754025.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695001|gb|EDQ81347.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 576
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H + ER+RR+K+N+K AL+ ++PN +K+DKAS+LE+AI Y+ LQ
Sbjct: 395 RGRKPANDREEPLNHVQAERQRREKLNQKFYALRSVVPNVSKMDKASLLEDAITYINELQ 454
Query: 122 FQVMMMSMGTGVCMPSMMLPTG 143
++ V ++ TG
Sbjct: 455 EKLQKAEAELKVFQRQVLASTG 476
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 224 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 283
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 284 LSMKLATVNPRL 295
>gi|297797077|ref|XP_002866423.1| hypothetical protein ARALYDRAFT_358332 [Arabidopsis lyrata subsp.
lyrata]
gi|297312258|gb|EFH42682.1| hypothetical protein ARALYDRAFT_358332 [Arabidopsis lyrata subsp.
lyrata]
Length = 406
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 62/104 (59%), Gaps = 12/104 (11%)
Query: 38 EDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQEL 97
+DTEG D+ E + E G S R+ R +H ER+RRD+IN++MR LQ+L
Sbjct: 187 QDTEG-----DEQETRGEA------GRSSGRRGRAAAIHNESERRRRDRINQRMRTLQKL 235
Query: 98 IPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLP 141
+P +K DK S+L++ I++LK LQ QV MS+ + MM+P
Sbjct: 236 LPTASKADKVSILDDVIEHLKQLQAQVQFMSLRANLPQ-QMMIP 278
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVC 134
H ER RR+KIN++M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ Q+ +SM
Sbjct: 109 HSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFLSMKLSAI 168
Query: 135 MPSMMLPTGIIGMQQMHAVAPQMSHFP 161
P + + +Q + S FP
Sbjct: 169 GPGLNCD---LDLQDILCTQDASSAFP 192
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 266 RSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEF 325
Query: 127 MSMGTGVCMPSM 138
+SM P++
Sbjct: 326 LSMKLSTVNPAL 337
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN++M+ LQEL+P CNK+ A +L+E I+++++LQ QV
Sbjct: 180 RRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQSLQCQVEF 239
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 240 LSMRLAAVNP 249
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 13 SSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRT 72
S L ++N+ PA + K ++ G + E++ ++ V VR R+ +
Sbjct: 108 SVDLPETSSANSTPAVSESGSKIKHSSGRGKRVKSNVTEEEKAKEVVHVRA----RRGQA 163
Query: 73 PEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMMMSM 129
+ H ER RR KIN+K+R LQ ++P C K + A ML+E I+Y+++LQ QV +S+
Sbjct: 164 TDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSL 221
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 63 GSKSN----RKKR--TPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAID 115
G+K N R KR H ER RR KI+++M+ LQ+L+P CNK+ KA ML+E I+
Sbjct: 130 GTKENYVHLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIIN 189
Query: 116 YLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQM 150
Y+++LQ QV +SM P + I +QM
Sbjct: 190 YVQSLQRQVEFLSMKLATVNPELGFDIEQILSKQM 224
>gi|356498448|ref|XP_003518064.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 354
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN +M+ LQEL+P CNK+ A +L++ I+++++LQ +V +
Sbjct: 191 RRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQNEVEI 250
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPP 162
+SM P ++ + + V P +FPP
Sbjct: 251 LSMKLAAVNP--VIDFNLDSLLATEGVTPMDCNFPP 284
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 266 RSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEF 325
Query: 127 MSMGTGVCMPSM 138
+SM P++
Sbjct: 326 LSMKLSTVNPAL 337
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 305 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 364
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 365 LSMKLATVNPRL 376
>gi|356500821|ref|XP_003519229.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 260
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ Q
Sbjct: 136 RRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLQRQAEF 195
Query: 127 MSM 129
+SM
Sbjct: 196 LSM 198
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVC 134
H ER RR+KIN++M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ Q+ +SM
Sbjct: 135 HSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFLSMKLSAI 194
Query: 135 MPSMMLPTGIIGMQQMHAVAPQMSHFP 161
P + + +Q + S FP
Sbjct: 195 GPGLNCD---LDLQDILCTQDASSAFP 218
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 131 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 190
Query: 127 MSM 129
+SM
Sbjct: 191 LSM 193
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 77 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 136
Query: 127 MSM 129
+SM
Sbjct: 137 LSM 139
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 133 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 192
Query: 127 MSM 129
+SM
Sbjct: 193 LSM 195
>gi|30695836|ref|NP_850745.1| transcription factor bHLH60 [Arabidopsis thaliana]
gi|6729523|emb|CAB67608.1| putative protein [Arabidopsis thaliana]
gi|22655000|gb|AAM98091.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|27764962|gb|AAO23602.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|332646182|gb|AEE79703.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 379
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN +M+ LQEL+P C+K+ A +L+E I+++++LQ QV M
Sbjct: 207 RRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQVEM 266
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 267 LSMRLAAVNPRI 278
>gi|20127060|gb|AAM10949.1|AF488593_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 379
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN +M+ LQEL+P C+K+ A +L+E I+++++LQ QV M
Sbjct: 207 RRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQVEM 266
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 267 LSMRLAAVNPRI 278
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 268 RSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEF 327
Query: 127 MSMGTGVCMPSM 138
+SM P++
Sbjct: 328 LSMKLSAVNPAL 339
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVC 134
H ER RR+KIN++M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ Q+ +SM
Sbjct: 135 HSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFLSMKLSAI 194
Query: 135 MPSM 138
P +
Sbjct: 195 GPGL 198
>gi|255572174|ref|XP_002527027.1| hypothetical protein RCOM_1311460 [Ricinus communis]
gi|223533662|gb|EEF35399.1| hypothetical protein RCOM_1311460 [Ricinus communis]
Length = 260
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 56/77 (72%), Gaps = 6/77 (7%)
Query: 65 KSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQV 124
+++R+ R+ YER+RR++I +K++AL ELIP+C+K D AS+LE AIDYLK L+ QV
Sbjct: 95 QNHRRTRS----ATYERRRRNRIREKLKALGELIPHCHKQDTASLLEAAIDYLKALKLQV 150
Query: 125 MMMS-MGTG-VCMPSMM 139
MMS MG G +C S M
Sbjct: 151 EMMSNMGGGALCQASSM 167
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVC 134
H ER RR+KIN++M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ Q+ +SM
Sbjct: 139 HSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFLSMKLSAI 198
Query: 135 MPSM 138
P +
Sbjct: 199 GPGL 202
>gi|356534621|ref|XP_003535851.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 357
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN +M+ LQEL+P CNK+ A +L++ I+++++LQ +V +
Sbjct: 195 RRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQNEVEI 254
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPP 162
+SM P ++ + + V P +FPP
Sbjct: 255 LSMKLAAVNP--VIDFNLDSLLATEGVTPMDCNFPP 288
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 13 SSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRT 72
S L ++N+ PA + K ++ G + E++ ++ V VR R+ +
Sbjct: 107 SMDLPETSSANSTPAVSESGSKIKHSSGRGKRVKSNVTEEEKAKEVVHVRA----RRGQA 162
Query: 73 PEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMMMSM 129
+ H ER RR KIN+K+R LQ ++P C K + A ML+E I+Y+++LQ QV +S+
Sbjct: 163 TDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSL 220
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++M+ LQ L+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 84 RRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEF 143
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 144 LSMKLATMNPQL 155
>gi|51969310|dbj|BAD43347.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|51970180|dbj|BAD43782.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
Length = 327
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASM-LEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN +M+ LQEL+P C+K+ + L+E I++++TLQ QV M
Sbjct: 188 RRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTGLVLDEIINHVQTLQRQVEM 247
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 248 LSMRLAAVNP 257
>gi|413938508|gb|AFW73059.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 39/48 (81%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+ RR++I++++RALQEL+PN KVD +MLE+AI Y+K LQ QV +++
Sbjct: 210 KNRRERISERLRALQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVLA 257
>gi|357486401|ref|XP_003613488.1| BHLH transcription factor [Medicago truncatula]
gi|355514823|gb|AES96446.1| BHLH transcription factor [Medicago truncatula]
Length = 239
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++L QV
Sbjct: 115 RRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLHHQVEF 174
Query: 127 MSM 129
+SM
Sbjct: 175 LSM 177
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P C+K+ KA MLEE I+Y+++LQ Q+
Sbjct: 9 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLEEIINYVQSLQRQIEF 68
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 69 LSMKLAAVDPRL 80
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 52/182 (28%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 138 RRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKAVMLDEIINYVQSLQNQVEF 197
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRM----QMGAGCNPAQF 182
+SM ++ V+P + F G+ ++G+M ++G+ +Q
Sbjct: 198 LSM-------------------KLATVSPMLYEF---GLDIEGQMNDLERVGSFPQDSQL 235
Query: 183 LMP-PIP---------------GATAVPGI---QMP-GFPGQPLPMSMLRTPLGLMHKTN 222
L+P IP G T+ P + Q P F G P + M G HK
Sbjct: 236 LVPKTIPFQHRVCEEDTRSYSIGETSAPFLLHDQGPLSFSGVPFSVEM-----GTKHKAF 290
Query: 223 PV 224
V
Sbjct: 291 SV 292
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
++ + H ER RR KI+++M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 141 KRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEF 200
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGI 165
+SM P + I +QM + Q H G+
Sbjct: 201 LSMKLATVNPELGFDIEQIISKQM--MLSQDRHLAFYGV 237
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+++P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 140 RRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQRQVEF 199
Query: 127 MSM 129
+SM
Sbjct: 200 LSM 202
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 139 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 198
Query: 127 MSM 129
+SM
Sbjct: 199 LSM 201
>gi|312281897|dbj|BAJ33814.1| unnamed protein product [Thellungiella halophila]
Length = 375
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN +M+ LQEL+P C+K+ A +L+E I+++++LQ QV M
Sbjct: 203 RRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQVEM 262
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 263 LSMRLAAVNPRI 274
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ L+P C KV KA ML+E I+Y+++LQ QV
Sbjct: 262 RRGQATNSHSLAERVRREKISERMKYLQNLVPGCTKVTGKAVMLDEIINYVQSLQRQVEF 321
Query: 127 MSMGTGVCMPSM 138
+SM P++
Sbjct: 322 LSMKLASVNPTL 333
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++MR LQ L+P C+KV KA +L+E I+Y+++LQ QV
Sbjct: 124 RRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEF 183
Query: 127 MSM 129
+SM
Sbjct: 184 LSM 186
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 50 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 109
Query: 127 MSM 129
+SM
Sbjct: 110 LSM 112
>gi|242084070|ref|XP_002442460.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
gi|241943153|gb|EES16298.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
Length = 373
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 40/50 (80%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMG 130
++RR KIN++++ LQ+L+P C+K ++AS L++ I Y+K+LQ QV MS+G
Sbjct: 223 QRRRHKINERLKTLQQLVPGCSKSNQASTLDQTIHYMKSLQHQVQAMSVG 272
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P C KV KA ML+E I+Y+++LQ QV
Sbjct: 391 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQVES 450
Query: 127 MSMGTGVCMPS 137
+SM P+
Sbjct: 451 LSMKVASVNPT 461
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++MR LQEL+P C+KV KA ML+E I+Y+++LQ QV +
Sbjct: 149 RRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEV 208
Query: 127 MSMGTGVCMPSMMLPTGI 144
+ S L +G
Sbjct: 209 NGTAAAWDIGSQNLFSGF 226
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++MR LQ L+P C+KV KA +L+E I+Y+++LQ QV
Sbjct: 114 RRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEF 173
Query: 127 MSM 129
+SM
Sbjct: 174 LSM 176
>gi|255570649|ref|XP_002526279.1| conserved hypothetical protein [Ricinus communis]
gi|223534360|gb|EEF36068.1| conserved hypothetical protein [Ricinus communis]
Length = 271
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 38/47 (80%)
Query: 80 ERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMM 126
E+KRR++I K++AL ELIPNC+K D AS+L AIDY+++LQ Q+ +
Sbjct: 121 EKKRRNRIRDKLKALGELIPNCHKQDTASILVHAIDYIRSLQLQIYV 167
>gi|168000495|ref|XP_001752951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695650|gb|EDQ81992.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P+C+KV KA ML+E I+Y+++LQ Q+
Sbjct: 28 RRGQATDSHSLAERVRREKISERMKFLQDLVPSCSKVTGKAVMLDEIINYVQSLQRQIEF 87
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMS 158
+SM P + + + +++H + +M+
Sbjct: 88 LSMKLAAVDPRLDINLLNLLNKEVHNLICEMA 119
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 36 RYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQ 95
R E E S+ D+ K + VR R+ + + H ER RR++I+++MR LQ
Sbjct: 110 RKETEEKSSTDEDEASKGY----IHVRA----RRGQATDSHSLAERVRRERISERMRMLQ 161
Query: 96 ELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMM-LPTGIIGMQQMHA 152
L+P C+KV KA +L+E I+Y+++LQ QV +SM P + T G+ HA
Sbjct: 162 ALVPGCDKVTGKAMVLDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGTNSEGLHDHHA 220
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 18/144 (12%)
Query: 23 NNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERK 82
+N +C+ K D +G+ + V VR ++ + H ER
Sbjct: 120 DNQKSCSKMQSKEDSSDGDGT-----------KEDYVHVRA----KRGQATNSHSLAERL 164
Query: 83 RRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLP 141
RR KI+++M+ LQ+L+P C+K+ KA ML+E I+Y+++LQ QV +SM P +
Sbjct: 165 RRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPELSFD 224
Query: 142 TGIIGMQQMHAVAPQMSHFPPMGI 165
I +QM + Q H G+
Sbjct: 225 IEQILSKQM--MLSQDRHLAFYGV 246
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++M+ LQ L+P CNK+ KA ML+E I+Y+++LQ QV
Sbjct: 114 RRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEF 173
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 174 LSMKLATMNPQL 185
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 38/49 (77%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
Y R RR+KIN++++ LQ L+PN +VD +MLEEAI ++K L+FQ+ ++
Sbjct: 484 YARHRREKINERLKTLQRLVPNGEQVDIVTMLEEAIHFVKFLEFQLELL 532
>gi|297819388|ref|XP_002877577.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
gi|297323415|gb|EFH53836.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 35 RRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRAL 94
RR +T + EK + + VR R+ + + H ER RR+KI+++M+ L
Sbjct: 114 RREGETSSGGGSKETEEKSPLKDYIHVRA----RRGQATDRHSLAERARREKISERMKFL 169
Query: 95 QELIPNCNK-VDKASMLEEAIDYLKTLQFQVMMMSM 129
Q+LIP CNK + KA +L+E I+Y+++LQ QV +SM
Sbjct: 170 QDLIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSM 205
>gi|20453066|gb|AAM19778.1| At2g46510/F13A10.4 [Arabidopsis thaliana]
Length = 566
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+K LQ
Sbjct: 382 RGRKPANGREEPLNHVEVERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQ 441
Query: 122 FQVMMM 127
+V +M
Sbjct: 442 EKVKIM 447
>gi|363808336|ref|NP_001242250.1| transcription factor bHLH48-like [Glycine max]
gi|256002927|gb|ACU52707.1| bHLH transcription factor PTF1 [Glycine max]
Length = 366
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASM-LEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN +M+ LQEL+P C+K+ +M L+E I+++++LQ QV +
Sbjct: 203 RRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQRQVEI 262
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 263 LSMKLAAVNPRI 274
>gi|357159056|ref|XP_003578325.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 409
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 68 RKKRTPEVHKRY--ERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQV 124
R KR H R ER RR KI++++R LQEL+PN K + + ML+ A+DY+K LQ QV
Sbjct: 328 RAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQV 387
Query: 125 MMMSMGTGVCMPSMMLPTGIIG 146
+M+ G C S P G
Sbjct: 388 KVMNDGRASCTCSASRPKQFAG 409
>gi|356527821|ref|XP_003532505.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 252
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 13 SSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRT 72
++ +C ++N+ PA + K + G + E K + V VR ++ +
Sbjct: 85 ATDICEPSSANSTPAVSESGSKTKNSSGRGKRVKRNSIEDKKPNEVVHVRA----KRGQA 140
Query: 73 PEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMMMSM 129
+ H ER RR KIN+K+R LQ ++P C K + A ML+E I+Y+++LQ QV +SM
Sbjct: 141 TDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSM 198
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 139 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 198
Query: 127 MSM 129
+SM
Sbjct: 199 LSM 201
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++MR LQ L+P C+KV KA +L+E I+Y+++LQ QV
Sbjct: 123 RRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEF 182
Query: 127 MSM 129
+SM
Sbjct: 183 LSM 185
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 51 EKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASM 109
EKK +A T R+ + + H ER RR+KI+++M+ LQ L+P C+KV KA M
Sbjct: 139 EKKANEEAPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQSLVPGCDKVTGKALM 198
Query: 110 LEEAIDYLKTLQFQVMMMSM 129
L+E I+Y+++LQ QV +SM
Sbjct: 199 LDEIINYVQSLQNQVEFLSM 218
>gi|297828381|ref|XP_002882073.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327912|gb|EFH58332.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 563
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 12/114 (10%)
Query: 21 ASNNNPACNTFNLKRRYEDTE-------GSACPCDQYEKKLERKAVTVRGSKSNRKKRTP 73
A+++NP+ NT L++ TE A ++K RK RG K + P
Sbjct: 339 AASSNPSTNT-QLEKSESCTEKRPVSLLAGAGTVSVVDEKRPRK----RGRKPANGREEP 393
Query: 74 EVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+K LQ +V +M
Sbjct: 394 LNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIM 447
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 96 RRGQATDSHSLAERARRERISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQQQVEF 155
Query: 127 MSM 129
+SM
Sbjct: 156 LSM 158
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+++P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 144 RRGQATDSHSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQSLQRQVEF 203
Query: 127 MSM 129
+SM
Sbjct: 204 LSM 206
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVC 134
H ER RR+KIN++M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ Q+ +SM
Sbjct: 135 HSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFLSMKLSAI 194
Query: 135 MPSM 138
P +
Sbjct: 195 GPGL 198
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 51 EKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASM 109
EKK +A T R+ + + H ER RR+KI+++M+ LQ L+P C+KV KA M
Sbjct: 150 EKKANEEAPTGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALM 209
Query: 110 LEEAIDYLKTLQFQVMMMSM 129
L+E I+Y+++LQ QV +SM
Sbjct: 210 LDEIINYVQSLQNQVEFLSM 229
>gi|18407096|ref|NP_566078.1| transcription factor ABA-INDUCIBLE bHLH-TYPE [Arabidopsis thaliana]
gi|75315651|sp|Q9ZPY8.2|AIB_ARATH RecName: Full=Transcription factor ABA-INDUCIBLE bHLH-TYPE;
Short=AtAIB; AltName: Full=Basic helix-loop-helix
protein 17; Short=AtbHLH17; Short=bHLH 17; AltName:
Full=Transcription factor EN 35; AltName: Full=bHLH
transcription factor bHLH017
gi|20197775|gb|AAD20162.2| putative bHLH transcription factor [Arabidopsis thaliana]
gi|20197823|gb|AAM15265.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255618|gb|AEC10712.1| transcription factor ABA-INDUCIBLE bHLH-TYPE [Arabidopsis thaliana]
Length = 566
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+K LQ
Sbjct: 382 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQ 441
Query: 122 FQVMMM 127
+V +M
Sbjct: 442 EKVKIM 447
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASM-LEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN +M+ LQEL+P C+K+ +M L+E I+++++LQ QV +
Sbjct: 209 RRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQRQVEI 268
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 269 LSMKLAAVNPRI 280
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 5/80 (6%)
Query: 51 EKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASM 109
E + R + VR R+ + + H ER RR++I+++MR LQ L+P C+KV KA +
Sbjct: 129 EDEATRGYIHVRA----RRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALI 184
Query: 110 LEEAIDYLKTLQFQVMMMSM 129
L+E I+Y+++LQ QV +SM
Sbjct: 185 LDEIINYVQSLQNQVEFLSM 204
>gi|413956455|gb|AFW89104.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 239
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVC 134
H ER RR+KIN +M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ QV +SM
Sbjct: 165 HSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSAI 224
Query: 135 MPSM 138
P
Sbjct: 225 RPGF 228
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+++P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 103 RRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEF 162
Query: 127 MSM 129
+ M
Sbjct: 163 LFM 165
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 49 QYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KA 107
Q E+KL V VR R+ + + H ER RR+KIN++M+ LQEL+P CNK+ A
Sbjct: 172 QEEEKL--PYVHVRA----RRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTA 225
Query: 108 SMLEEAIDYLKTLQFQVMMMSMGTGVCMPSM 138
+L+E I++++ LQ QV ++SM P +
Sbjct: 226 LVLDEIINHVQFLQRQVEILSMRLAAVNPRI 256
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN +M+ LQEL+P CNK+ A +L+E I+++++LQ QV
Sbjct: 204 RRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEF 263
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 264 LSMRLAAVNP 273
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVC 134
H ER RR+KIN++M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ Q+ +SM
Sbjct: 109 HSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFLSMKLSAI 168
Query: 135 MPSM 138
P +
Sbjct: 169 GPGL 172
>gi|223702428|gb|ACN21645.1| putative basic helix-loop-helix protein BHLH8 [Lotus japonicus]
Length = 309
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M LQ+L+P C+KV KA +LEE I+Y+++LQ QV
Sbjct: 122 RRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQVEF 181
Query: 127 MSMGTGVCMPSMM 139
+SM P +
Sbjct: 182 LSMKLASVNPMLF 194
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 40/51 (78%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
Y RKRR++IN++++ LQ ++PN KVD ++MLEEA+ Y+K LQ Q+ + ++
Sbjct: 284 YARKRRERINERLKILQHIVPNGTKVDISTMLEEAVHYVKFLQLQIKVKAL 334
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 5/80 (6%)
Query: 51 EKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASM 109
E + R + VR R+ + + H ER RR++I+++MR LQ L+P C+KV KA +
Sbjct: 129 EDEATRGYIHVRA----RRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALI 184
Query: 110 LEEAIDYLKTLQFQVMMMSM 129
L+E I+Y+++LQ QV +SM
Sbjct: 185 LDEIINYVQSLQNQVEFLSM 204
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 151 RRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEF 210
Query: 127 MSM 129
+SM
Sbjct: 211 LSM 213
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 150 RRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEF 209
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 210 LSMKLASVNP 219
>gi|302775426|ref|XP_002971130.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
gi|300161112|gb|EFJ27728.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
Length = 572
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R K T E R+RR KI++++R L++L+P NK+D ASML+EAI ++K LQ QV ++
Sbjct: 381 RFKETVEPQSIAARQRRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLL 440
Query: 128 -SMGTG 132
++G G
Sbjct: 441 EAVGNG 446
>gi|297824189|ref|XP_002879977.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
gi|297325816|gb|EFH56236.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN +M+ LQEL+P C+K+ A +L+E I+++++LQ QV M
Sbjct: 187 RRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQVEM 246
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 247 LSMRLAAVNP 256
>gi|413956454|gb|AFW89103.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 263
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVC 134
H ER RR+KIN +M+ LQ+L+P CNK+ KA ML+E I+Y+++LQ QV +SM
Sbjct: 165 HSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSAI 224
Query: 135 MP 136
P
Sbjct: 225 RP 226
>gi|255572178|ref|XP_002527029.1| hypothetical protein RCOM_1311480 [Ricinus communis]
gi|223533664|gb|EEF35401.1| hypothetical protein RCOM_1311480 [Ricinus communis]
Length = 243
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 50/62 (80%)
Query: 67 NRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMM 126
NRK+ + ++ YER+RRD+I KM++L+ELIP+C+K D+ASML++AI+YLK L+ V M
Sbjct: 78 NRKRISADMRNIYERRRRDRIRDKMKSLRELIPHCHKQDRASMLDDAINYLKALKLHVEM 137
Query: 127 MS 128
++
Sbjct: 138 LA 139
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++MR LQ L+P C+KV KA +L+E I+Y+++LQ QV
Sbjct: 128 RRGQATDSHSLAERVRRERISERMRLLQTLVPGCDKVTGKALILDEIINYVQSLQNQVEF 187
Query: 127 MSM 129
+SM
Sbjct: 188 LSM 190
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++MR LQ L+P C+KV KA +L+E I+Y+++LQ QV
Sbjct: 114 RRGQATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEF 173
Query: 127 MSM 129
+SM
Sbjct: 174 LSM 176
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 67 NRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVM 125
+R+ + + H ER RR++I ++M+ LQ+L+P CNKV KA L+E I+Y+++LQ QV
Sbjct: 145 SRRGQATDSHSLAERARRERIGERMKILQDLVPGCNKVIGKALALDEIINYIQSLQCQVE 204
Query: 126 MMSMGTGVCMPSMMLPTGIIGMQ 148
+SM M I G+
Sbjct: 205 FLSMKLEAVNSRMSTSPAIEGLH 227
>gi|302757065|ref|XP_002961956.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
gi|300170615|gb|EFJ37216.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
Length = 572
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R K T E R+RR KI++++R L++L+P NK+D ASML+EAI ++K LQ QV ++
Sbjct: 381 RFKETVEPQSIAARQRRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLL 440
Query: 128 -SMGTG 132
++G G
Sbjct: 441 EAVGNG 446
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 58 AVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYL 117
A+ G ++ + Y R RR+KIN++++ LQ L+PN KVD +ML+EAI Y+
Sbjct: 435 ALNTNGKPRAKRGSATDPQSVYARHRREKINERLKNLQNLVPNGAKVDIVTMLDEAIHYV 494
Query: 118 KTLQFQVMMM 127
K LQ QV ++
Sbjct: 495 KFLQTQVELL 504
>gi|242066232|ref|XP_002454405.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
gi|241934236|gb|EES07381.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
Length = 306
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 38/48 (79%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+ RR++I++++R LQEL+PN KVD +MLE+AI Y+K LQ QV +++
Sbjct: 223 KNRRERISERLRTLQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVLA 270
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 183 RRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEF 242
Query: 127 MSM 129
+SM
Sbjct: 243 LSM 245
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 72/129 (55%), Gaps = 11/129 (8%)
Query: 2 DAGKCIEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTV 61
D K +P S+S S + ++N +T K++ + S+ D+ E K + V
Sbjct: 56 DDKKPRKPREDSASFSSAHSKDSNSKEST---KKKGGKRDRSSKEVDEEEPK---GYIHV 109
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTL 120
R R+ + + H ER RR++I+++MR LQ L+P C+KV KA +L+E I+Y+++L
Sbjct: 110 RA----RRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSL 165
Query: 121 QFQVMMMSM 129
Q QV +SM
Sbjct: 166 QNQVEFLSM 174
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++MR LQ L+P C+KV KA +L+E I+Y+++LQ QV
Sbjct: 114 RRGQATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEF 173
Query: 127 MSM 129
+SM
Sbjct: 174 LSM 176
>gi|294462520|gb|ADE76806.1| unknown [Picea sitchensis]
Length = 392
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI ++M+ LQ+L+P CNK+ KA M++E I+Y+++LQ QV
Sbjct: 221 RRGQATDRHSLAERVRREKIGERMKLLQDLVPGCNKITGKAVMVDEIINYVQSLQCQVEF 280
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 281 LSMKLEAVNPKL 292
>gi|357509815|ref|XP_003625196.1| Transcription factor bHLH60 [Medicago truncatula]
gi|124360133|gb|ABN08149.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355500211|gb|AES81414.1| Transcription factor bHLH60 [Medicago truncatula]
Length = 340
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN +M+ LQEL+P C K+ A +L+E I++++TLQ QV +
Sbjct: 176 RRGQATDSHSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHVQTLQRQVEI 235
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 236 LSMKLAAVNPRI 247
>gi|18568238|gb|AAL75975.1|AF466203_4 regulatory protein [Zea mays]
gi|414585919|tpg|DAA36490.1| TPA: colored plant1 [Zea mays]
Length = 557
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 16/130 (12%)
Query: 11 VPSSSLCSLGASN--NNPACNTFNLKRRYEDT---EGSACPCDQYEKKLERKAVTVRGSK 65
VPSS+L G+S + +F R + E +A P + +KL +KAV G+
Sbjct: 300 VPSSALPVDGSSAPADGSRATSFVAWTRSSQSCSGEAAAVPVIEEPQKLLKKAVAGGGAW 359
Query: 66 SNR-----------KKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAI 114
+N ++ + H ERKRR+K+N+ L+ L+P+ +KVDKAS+L E I
Sbjct: 360 ANTNCGGGGTTVTAQENGAKNHVMLERKRREKLNEMFLVLKSLVPSIHKVDKASILAETI 419
Query: 115 DYLKTLQFQV 124
YLK LQ +V
Sbjct: 420 AYLKELQRRV 429
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 67 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 126
Query: 127 MSM 129
+SM
Sbjct: 127 LSM 129
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 57 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVES 116
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 117 LSMKLASVNP 126
>gi|225441702|ref|XP_002282897.1| PREDICTED: transcription factor bHLH60 [Vitis vinifera]
gi|297739713|emb|CBI29895.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN +M+ LQEL+P CNK+ A +L+E I ++++LQ QV
Sbjct: 200 RRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIISHVQSLQRQVEF 259
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 260 LSMRLAAVNP 269
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 19 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 78
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 79 LSMKLAAVNPRL 90
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 10/133 (7%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++MR LQ L+P C+KV KA +L+E I+Y+++LQ QV
Sbjct: 108 RRGQATDSHSLSERVRRERISERMRMLQSLVPGCDKVTGKALILDEIINYVRSLQNQVEF 167
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPM-----GIGMDGRMQMGAGCNPAQ 181
+SM P + GM+ A + Q M + D M + P+Q
Sbjct: 168 LSMRIASLSPVVY----GFGMESEAAFSDQSHKIEGMFHEAAALPTDPPMNRSSSPTPSQ 223
Query: 182 FLMPPIPGATAVP 194
+M + +++ P
Sbjct: 224 AMMDTVTSSSSPP 236
>gi|302398591|gb|ADL36590.1| BHLH domain class transcription factor [Malus x domestica]
Length = 502
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 19/168 (11%)
Query: 10 PVPSSSLCSLGASN---------------NNPACNTFNLKRRYEDTEGSACPCDQYEKKL 54
P S L S+G SN N + FN + R +E D+ ++
Sbjct: 279 PSESFELQSVGTSNGFRSEGGEVKLFPQMNQMMVDGFNTQTRVSSSE---LLKDESSTQV 335
Query: 55 ERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAI 114
+ + RG K + + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI
Sbjct: 336 DEQKPRKRGRKPSNGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAI 395
Query: 115 DYLKTLQFQVMMMSMGTG-VCMPSMMLPTGIIGMQQMHAVAPQMSHFP 161
++ LQ ++ ++ V LP I Q+ H A +FP
Sbjct: 396 THITDLQTKIRVIETEKQMVNNKGKQLPVPEIDFQERHGDAVVRMNFP 443
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 132 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEF 191
Query: 127 MS 128
+S
Sbjct: 192 LS 193
>gi|224133354|ref|XP_002321546.1| predicted protein [Populus trichocarpa]
gi|222868542|gb|EEF05673.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M LQ+L+P CNKV KA +L+E I+Y+++LQ QV
Sbjct: 87 RRGQATDSHSLAERARREKISERMNMLQDLVPGCNKVIGKALVLDEIINYIQSLQCQVEF 146
Query: 127 MSM 129
+SM
Sbjct: 147 LSM 149
>gi|167999578|ref|XP_001752494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696394|gb|EDQ82733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGT 131
R RR KI++++R L++LIP NK+D A+ML+EAI+Y+K LQ QV ++ T
Sbjct: 396 RHRRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYVKFLQLQVQILESDT 446
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ Q+
Sbjct: 171 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEF 230
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 231 LSMKLSAVNPVL 242
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
++ + H ER RR KI+++M+ LQ+L+P C+K+ KA ML+E I+Y+++LQ QV
Sbjct: 109 KRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEF 168
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGI 165
+SM P + I +QM + Q H G+
Sbjct: 169 LSMKLATVNPELGFDIEQIISKQM--LLSQDRHLAFYGV 205
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 174 RRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIINYVQSLQNQVEF 233
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 234 LSMKLASVNP 243
>gi|140084346|gb|ABO84932.1| Rhd6-like 3 [Physcomitrella patens]
Length = 67
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
Y R RR+KIN++++ LQ L+PN KVD +ML+EAI Y++ LQ QV ++
Sbjct: 10 YARHRREKINERLKTLQHLVPNGAKVDIVTMLDEAIHYVQFLQLQVTLL 58
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R ++ H E+ RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 151 RSEQATNSHSIAEKLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 210
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 211 LSMKLSTVNPRL 222
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 51 EKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASM 109
E++ +R+ V VR R+ + + H ER RR KIN++++ LQ+++P C K A+M
Sbjct: 139 EEEKDREVVHVRA----RRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATM 194
Query: 110 LEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDG 169
L+E I+Y+++LQ QV +SM + ++ M + + MG G DG
Sbjct: 195 LDEIINYVQSLQNQVEFLSMKLTAASSYYDFNSETDAVESMQRAKAREA--VEMGQGRDG 252
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ Q+
Sbjct: 79 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQIEF 138
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 139 LSMKLAAVNP 148
>gi|356571248|ref|XP_003553791.1| PREDICTED: transcription factor bHLH13-like [Glycine max]
Length = 619
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 44/66 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ LQ
Sbjct: 424 RGRKPANGREAPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAIAYINELQ 483
Query: 122 FQVMMM 127
+V +M
Sbjct: 484 AKVRIM 489
>gi|357440189|ref|XP_003590372.1| Transcription factor BEE [Medicago truncatula]
gi|355479420|gb|AES60623.1| Transcription factor BEE [Medicago truncatula]
Length = 326
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN +M+ LQEL+P CNK+ A +L++ I+++++LQ +V +
Sbjct: 163 RRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQHEVEI 222
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 223 LSMKLAAVNP 232
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
Y R RR+KIN+++++LQ L+PN KVD +ML+EAI Y+K LQ QV ++
Sbjct: 10 YARHRREKINERLKSLQNLVPNGAKVDIVTMLDEAIHYVKFLQNQVELL 58
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
++ + H ER RR KI+++M+ LQ+L+P C+K+ KA ML+E I+Y+++LQ QV
Sbjct: 149 KRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEF 208
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQM 150
+SM P + I +QM
Sbjct: 209 LSMKLATVNPELGFDIEQILSKQM 232
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
++ + H ER RR KI+++M+ LQ+L+P C+K+ KA ML+E I+Y+++LQ QV
Sbjct: 141 KRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEF 200
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGI 165
+SM P + I +QM + Q H G+
Sbjct: 201 LSMKLSTVNPELGFDIEQIISKQM--MLSQDRHLAFYGV 237
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
++ + H ER RR KI+++M+ LQ+L+P C+K+ KA ML+E I+Y+++LQ QV
Sbjct: 143 KRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEF 202
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQM 150
+SM P + I +QM
Sbjct: 203 LSMKLATVNPELGFDIEQILSKQM 226
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 175 RRGQATDSHSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEF 234
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 235 LSMKLASVNP 244
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P C+KV KA ML+E I+Y++ LQ QV
Sbjct: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
Query: 127 MSMGTGVCMPSMMLPTGI 144
+SM P M G+
Sbjct: 246 LSMKLASVNP-MFYDFGM 262
>gi|140084384|gb|ABO84936.1| Rhd6-like 7 [Physcomitrella patens]
Length = 67
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 38/49 (77%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
Y R RR+KIN++++ LQ L+PN +VD +MLEEAI ++K L+FQ+ ++
Sbjct: 10 YARHRREKINERLKTLQRLVPNGEQVDIVTMLEEAIHFVKFLEFQLELL 58
>gi|218194642|gb|EEC77069.1| hypothetical protein OsI_15464 [Oryza sativa Indica Group]
Length = 403
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 73 PEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGT 131
PE K Y RR++I+++M+ LQ L+P CNK+ KA ML+E I+Y+++LQ QV +SM
Sbjct: 195 PEPAKDYIHVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKL 254
Query: 132 GVCMPSM 138
P +
Sbjct: 255 ATMNPQL 261
>gi|125540854|gb|EAY87249.1| hypothetical protein OsI_08651 [Oryza sativa Indica Group]
Length = 299
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 63 GSKSNRKKRTPEV-----HKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYL 117
G K+ + K P + RR++I++++R LQEL+PN KVD +MLE+AI Y+
Sbjct: 190 GRKAGKAKSVPTTPTKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYV 249
Query: 118 KTLQFQVMMMS 128
K LQ QV +++
Sbjct: 250 KFLQLQVKVLA 260
>gi|41052641|dbj|BAD07489.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|41052857|dbj|BAD07771.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 298
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 63 GSKSNRKKRTPEV-----HKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYL 117
G K+ + K P + RR++I++++R LQEL+PN KVD +MLE+AI Y+
Sbjct: 190 GRKAGKAKSAPTTPTKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYV 249
Query: 118 KTLQFQVMMMS 128
K LQ QV +++
Sbjct: 250 KFLQLQVKVLA 260
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 38/48 (79%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
R RR++I+ +++ LQEL+PN KVD +MLE+AI+Y+K LQ QV +++
Sbjct: 374 RHRRERISDRLKILQELVPNSTKVDLVTMLEKAINYVKFLQLQVKVLT 421
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 68 RKKRTPEVHKR--YERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQV 124
R KR H R ER RR KI++++R LQEL+PN K + + ML+ A+DY+K LQ QV
Sbjct: 325 RAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQV 384
Query: 125 MMMSMGTGVC 134
+M+ G C
Sbjct: 385 KVMNDGRAGC 394
>gi|125578091|gb|EAZ19313.1| hypothetical protein OsJ_34859 [Oryza sativa Japonica Group]
Length = 311
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 15/86 (17%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV---------------DKASMLEE 112
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA ML+E
Sbjct: 148 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDE 207
Query: 113 AIDYLKTLQFQVMMMSMGTGVCMPSM 138
I+Y+++LQ QV +SM P +
Sbjct: 208 IINYVQSLQRQVEFLSMKLSTVNPQL 233
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGVC 134
H ER RR KI+++M+ LQ+L+P C+K+ KA ML+E I+Y+++LQ QV +SM
Sbjct: 42 HSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLSTV 101
Query: 135 MPSMMLPTGIIGMQQMHAVAPQMSHFPPMGI 165
P + I +QM + Q H G+
Sbjct: 102 NPELGFDIEQIISKQM--MLSQDRHLAFYGV 130
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++MR LQ L+P C+KV KA +L+E I+Y+++LQ QV
Sbjct: 125 RRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEF 184
Query: 127 MSM 129
+SM
Sbjct: 185 LSM 187
>gi|125583427|gb|EAZ24358.1| hypothetical protein OsJ_08110 [Oryza sativa Japonica Group]
Length = 282
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 63 GSKSNRKKRTPEV-----HKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYL 117
G K+ + K P + RR++I++++R LQEL+PN KVD +MLE+AI Y+
Sbjct: 174 GRKAGKAKSAPTTPTKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYV 233
Query: 118 KTLQFQVMMMS 128
K LQ QV +++
Sbjct: 234 KFLQLQVKVLA 244
>gi|115448229|ref|NP_001047894.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|113537425|dbj|BAF09808.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|215766533|dbj|BAG98841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 300
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 63 GSKSNRKKRTPEV-----HKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYL 117
G K+ + K P + RR++I++++R LQEL+PN KVD +MLE+AI Y+
Sbjct: 192 GRKAGKAKSAPTTPTKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYV 251
Query: 118 KTLQFQVMMMS 128
K LQ QV +++
Sbjct: 252 KFLQLQVKVLA 262
>gi|449439537|ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449532109|ref|XP_004173026.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 265
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 5/83 (6%)
Query: 48 DQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDK 106
++ E+K R+ V VR R+ + + H ER RR KIN+++R L++++P C K +
Sbjct: 135 EKEEEKSTREVVHVRA----RRGQATDSHSLAERVRRGKINERLRCLKDIVPGCYKTMGM 190
Query: 107 ASMLEEAIDYLKTLQFQVMMMSM 129
A ML+E I+Y+++LQ QV +SM
Sbjct: 191 AVMLDEIINYVQSLQNQVEFLSM 213
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 175 RRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEF 234
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 235 LSMKLASVNP 244
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 51 EKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASM 109
E + R + VR R+ + + H ER RR++I+++MR LQ L+P C+KV KA +
Sbjct: 129 EDEATRGYIHVRA----RRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALI 184
Query: 110 LEEAIDYLKTLQFQVMMMSMGTGVCMPSM 138
L+E I+Y+++LQ QV +SM P +
Sbjct: 185 LDEIINYVQSLQNQVEFLSMRIASMSPVL 213
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 39/47 (82%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+RR++I+ +++ LQELIPN +KVD +MLE+AI+Y+K LQ QV ++
Sbjct: 424 RQRRERISDRLKILQELIPNGSKVDLVTMLEKAINYVKFLQLQVKVL 470
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
++ + + H ER RR+KIN K+R LQ+L+P C+K + A MLEE I+Y+ +LQ QV
Sbjct: 152 KRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHKSMGMAVMLEEIINYVHSLQNQVEF 211
Query: 127 MSM--GTGVCMPSMMLPT 142
+SM C + L T
Sbjct: 212 LSMELAAASCSYDLNLET 229
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR KIN++++ LQ+++P C K A+ML+E I+Y+++LQ QV
Sbjct: 150 RRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEF 209
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDG 169
+SM + ++ M A A + MG G DG
Sbjct: 210 LSMKLTAASSYYDFNSETDAVESMQAKAREA---VEMGQGRDG 249
>gi|140084376|gb|ABO84935.1| Rhd6-like 6 [Physcomitrella patens]
Length = 67
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
Y R RR+KIN++++ LQ L+PN KVD +ML+EAI Y+K LQ QV ++
Sbjct: 10 YARHRREKINERLKNLQNLVPNGAKVDIVTMLDEAIHYVKFLQTQVELL 58
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++MR LQ L+P C+KV KA +L+E I+Y+++LQ QV
Sbjct: 126 RRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEF 185
Query: 127 MSM 129
+SM
Sbjct: 186 LSM 188
>gi|449462019|ref|XP_004148739.1| PREDICTED: transcription factor MYC2-like [Cucumis sativus]
gi|449514569|ref|XP_004164415.1| PREDICTED: transcription factor MYC2-like [Cucumis sativus]
Length = 661
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 37 YEDTEGSAC-PCDQYEKKLE-RKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRAL 94
+ D E SA D K LE K RG K + P H ER+RR+K+N+K AL
Sbjct: 437 HSDLEASAIREVDSCTKSLEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQKFYAL 496
Query: 95 QELIPNCNKVDKASMLEEAIDYLKTLQFQVMM 126
+ ++PN +K+DKAS+L +A+ Y+ L+ ++ M
Sbjct: 497 RAVVPNVSKMDKASLLGDAVSYINELKSKLQM 528
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 39/47 (82%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+RR++I+ +++ LQELIPN +KVD +MLE+AI+Y+K LQ QV ++
Sbjct: 424 RQRRERISDRLKILQELIPNGSKVDLVTMLEKAINYVKFLQLQVKVL 470
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 68 RKKRTPEVHKRY--ERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQV 124
R KR H R ER RR KI++++R LQEL+PN K + A ML+ A+DY+K LQ QV
Sbjct: 326 RAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQV 385
Query: 125 MMMSMGTGVC 134
+++ G C
Sbjct: 386 KVLNDGRASC 395
>gi|363808192|ref|NP_001242485.1| uncharacterized protein LOC100809878 [Glycine max]
gi|255644791|gb|ACU22897.1| unknown [Glycine max]
Length = 224
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P CNKV KA +L+ I+Y+++LQ QV
Sbjct: 102 RRGQATDNHSLAERARREKISERMKILQDLVPGCNKVIGKAFVLDGIINYVQSLQRQVEF 161
Query: 127 MSM 129
+SM
Sbjct: 162 LSM 164
>gi|449468542|ref|XP_004151980.1| PREDICTED: transcription factor bHLH3-like [Cucumis sativus]
gi|449505155|ref|XP_004162392.1| PREDICTED: transcription factor bHLH3-like [Cucumis sativus]
Length = 501
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ LQ
Sbjct: 344 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQ 403
Query: 122 FQVMMM 127
++ +M
Sbjct: 404 MKIKVM 409
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+++M+ LQ+L+P C++V KA +L+E I+Y+++LQ QV
Sbjct: 148 RRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIINYVQSLQNQVEF 207
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 208 LSMKLASVNP 217
>gi|359480522|ref|XP_002262815.2| PREDICTED: transcription factor bHLH25-like [Vitis vinifera]
gi|297735853|emb|CBI18607.3| unnamed protein product [Vitis vinifera]
Length = 338
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 13/126 (10%)
Query: 10 PVPSSSLCSLGASNNNPACNTF-NLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNR 68
P+P +L G + A N + NL+ S D Y+K+ + +G+KS
Sbjct: 103 PIPDDTLIWNGKPKDRAAANGYMNLE--------SLISQDSYQKQ-DHSPTYGQGTKSLS 153
Query: 69 KKRTPEVHKRY---ERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVM 125
R P ++ + ERKRR+K+N + AL +IP K DKAS+L +A+ Y+K LQ +V
Sbjct: 154 STRNPSQNQEHVIAERKRREKLNLQFIALSAIIPGLKKTDKASVLGDAVKYVKQLQERVK 213
Query: 126 MMSMGT 131
M+ T
Sbjct: 214 MLEEQT 219
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 68 RKKRTPEVHKRY--ERKRRDKINKKMRALQELIPNCNK--VDKASMLEEAIDYLKTLQFQ 123
R KR H R ER RR +I+++MR LQEL+PN +K V+ A ML+EA++Y+K+LQ Q
Sbjct: 469 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNSDKQTVNIADMLDEAVEYVKSLQKQ 528
Query: 124 VMMMSMGTGVC 134
V ++ C
Sbjct: 529 VQELAENRAKC 539
>gi|218188514|gb|EEC70941.1| hypothetical protein OsI_02533 [Oryza sativa Indica Group]
Length = 448
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 52 KKLERKAVTVRGSKSNRKK-RTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASML 110
++L +KAV G+ NR + + H ER+RR+K+N+ L+ L+P+ +KVDKAS+L
Sbjct: 264 QRLLKKAVGGGGAWMNRAAGSSIKNHVMSERRRREKLNEMFLTLKSLVPSIDKVDKASIL 323
Query: 111 EEAIDYLKTLQFQVMMMSMGTGVCMP 136
E I YLK L+ +V + G V P
Sbjct: 324 AETIAYLKELERRVQELESGKKVSRP 349
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 38/47 (80%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R RR++I+++++ LQ LIPN +KVD +MLE+AI Y++ L+FQ+ M+
Sbjct: 655 RVRRERISERLKVLQALIPNGDKVDMVTMLEKAISYVQCLEFQIKML 701
>gi|356511528|ref|XP_003524477.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 324
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KI+K+M LQ L+P C+KV KA +L+E I+Y+++LQ QV
Sbjct: 141 RRGQATDSHSLAERVRREKISKRMTTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEF 200
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 201 LSMKLASVNP 210
>gi|328687877|gb|AEB35550.1| MYC2 [Lactuca virosa]
Length = 317
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 47 CDQYEKKLERKAVTV---------RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQEL 97
D+ + ER+A+T RG K + P H ER+RR+K+N++ AL+ +
Sbjct: 169 SDEAPARDEREAITTILDEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAV 228
Query: 98 IPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
+PN +K+DKAS+L +AI Y+ LQ +V M
Sbjct: 229 VPNISKMDKASLLGDAITYITDLQKKVKEM 258
>gi|328687889|gb|AEB35556.1| MYC2 [Lactuca virosa]
gi|328687891|gb|AEB35557.1| MYC2 [Lactuca virosa]
Length = 317
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 47 CDQYEKKLERKAVTV---------RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQEL 97
D+ + ER+A+T RG K + P H ER+RR+K+N++ AL+ +
Sbjct: 169 SDEAPARDEREAITTILDEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAV 228
Query: 98 IPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
+PN +K+DKAS+L +AI Y+ LQ +V M
Sbjct: 229 VPNISKMDKASLLGDAITYITDLQKKVKEM 258
>gi|328687875|gb|AEB35549.1| MYC2 [Lactuca virosa]
gi|328687881|gb|AEB35552.1| MYC2 [Lactuca virosa]
gi|328687883|gb|AEB35553.1| MYC2 [Lactuca virosa]
gi|328687885|gb|AEB35554.1| MYC2 [Lactuca virosa]
gi|328687887|gb|AEB35555.1| MYC2 [Lactuca virosa]
gi|328687893|gb|AEB35558.1| MYC2 [Lactuca virosa]
gi|328687895|gb|AEB35559.1| MYC2 [Lactuca virosa]
gi|328687897|gb|AEB35560.1| MYC2 [Lactuca virosa]
gi|328687899|gb|AEB35561.1| MYC2 [Lactuca virosa]
Length = 317
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 47 CDQYEKKLERKAVTV---------RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQEL 97
D+ + ER+A+T RG K + P H ER+RR+K+N++ AL+ +
Sbjct: 169 SDEAPARDEREAITTILDEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAV 228
Query: 98 IPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
+PN +K+DKAS+L +AI Y+ LQ +V M
Sbjct: 229 VPNISKMDKASLLGDAITYITDLQKKVKEM 258
>gi|328687711|gb|AEB35467.1| MYC2 [Lactuca sativa]
gi|328687713|gb|AEB35468.1| MYC2 [Lactuca sativa]
gi|328687715|gb|AEB35469.1| MYC2 [Lactuca sativa]
gi|328687717|gb|AEB35470.1| MYC2 [Lactuca sativa]
gi|328687719|gb|AEB35471.1| MYC2 [Lactuca sativa]
gi|328687721|gb|AEB35472.1| MYC2 [Lactuca sativa]
gi|328687723|gb|AEB35473.1| MYC2 [Lactuca sativa]
gi|328687725|gb|AEB35474.1| MYC2 [Lactuca sativa]
gi|328687727|gb|AEB35475.1| MYC2 [Lactuca sativa]
gi|328687729|gb|AEB35476.1| MYC2 [Lactuca sativa]
gi|328687731|gb|AEB35477.1| MYC2 [Lactuca sativa]
gi|328687733|gb|AEB35478.1| MYC2 [Lactuca sativa]
gi|328687735|gb|AEB35479.1| MYC2 [Lactuca sativa]
gi|328687737|gb|AEB35480.1| MYC2 [Lactuca sativa]
gi|328687739|gb|AEB35481.1| MYC2 [Lactuca sativa]
gi|328687741|gb|AEB35482.1| MYC2 [Lactuca sativa]
gi|328687743|gb|AEB35483.1| MYC2 [Lactuca sativa]
gi|328687745|gb|AEB35484.1| MYC2 [Lactuca sativa]
gi|328687747|gb|AEB35485.1| MYC2 [Lactuca sativa]
gi|328687749|gb|AEB35486.1| MYC2 [Lactuca sativa]
gi|328687751|gb|AEB35487.1| MYC2 [Lactuca sativa]
gi|328687753|gb|AEB35488.1| MYC2 [Lactuca sativa]
gi|328687755|gb|AEB35489.1| MYC2 [Lactuca sativa]
gi|328687757|gb|AEB35490.1| MYC2 [Lactuca sativa]
gi|328687759|gb|AEB35491.1| MYC2 [Lactuca sativa]
gi|328687761|gb|AEB35492.1| MYC2 [Lactuca sativa]
gi|328687763|gb|AEB35493.1| MYC2 [Lactuca sativa]
gi|328687765|gb|AEB35494.1| MYC2 [Lactuca sativa]
gi|328687767|gb|AEB35495.1| MYC2 [Lactuca sativa]
gi|328687769|gb|AEB35496.1| MYC2 [Lactuca sativa]
gi|328687771|gb|AEB35497.1| MYC2 [Lactuca sativa]
gi|328687773|gb|AEB35498.1| MYC2 [Lactuca sativa]
gi|328687775|gb|AEB35499.1| MYC2 [Lactuca sativa]
gi|328687777|gb|AEB35500.1| MYC2 [Lactuca serriola]
gi|328687779|gb|AEB35501.1| MYC2 [Lactuca serriola]
gi|328687781|gb|AEB35502.1| MYC2 [Lactuca serriola]
gi|328687783|gb|AEB35503.1| MYC2 [Lactuca serriola]
gi|328687785|gb|AEB35504.1| MYC2 [Lactuca serriola]
gi|328687787|gb|AEB35505.1| MYC2 [Lactuca serriola]
gi|328687789|gb|AEB35506.1| MYC2 [Lactuca serriola]
gi|328687791|gb|AEB35507.1| MYC2 [Lactuca serriola]
gi|328687793|gb|AEB35508.1| MYC2 [Lactuca serriola]
gi|328687795|gb|AEB35509.1| MYC2 [Lactuca serriola]
gi|328687797|gb|AEB35510.1| MYC2 [Lactuca serriola]
gi|328687799|gb|AEB35511.1| MYC2 [Lactuca serriola]
gi|328687801|gb|AEB35512.1| MYC2 [Lactuca serriola]
gi|328687803|gb|AEB35513.1| MYC2 [Lactuca serriola]
gi|328687805|gb|AEB35514.1| MYC2 [Lactuca serriola]
gi|328687807|gb|AEB35515.1| MYC2 [Lactuca serriola]
gi|328687809|gb|AEB35516.1| MYC2 [Lactuca serriola]
gi|328687811|gb|AEB35517.1| MYC2 [Lactuca serriola]
gi|328687813|gb|AEB35518.1| MYC2 [Lactuca serriola]
gi|328687815|gb|AEB35519.1| MYC2 [Lactuca serriola]
gi|328687817|gb|AEB35520.1| MYC2 [Lactuca serriola]
gi|328687819|gb|AEB35521.1| MYC2 [Lactuca serriola]
gi|328687879|gb|AEB35551.1| MYC2 [Lactuca virosa]
gi|328687901|gb|AEB35562.1| MYC2 [Lactuca sativa]
Length = 317
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 47 CDQYEKKLERKAVTV---------RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQEL 97
D+ + ER+A+T RG K + P H ER+RR+K+N++ AL+ +
Sbjct: 169 SDETPARDEREAITTILDEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAV 228
Query: 98 IPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
+PN +K+DKAS+L +AI Y+ LQ +V M
Sbjct: 229 VPNISKMDKASLLGDAITYITDLQKKVKEM 258
>gi|168020611|ref|XP_001762836.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685945|gb|EDQ72337.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 72
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 38/47 (80%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R RR KI++++R L++LIP NK+D A+ML+EAI+Y+K LQ QV ++
Sbjct: 24 RHRRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYVKFLQLQVQIL 70
>gi|162463519|ref|NP_001105706.1| colored plant1 [Zea mays]
gi|22195|emb|CAA40544.1| regulatory protein [Zea mays]
Length = 562
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 15/129 (11%)
Query: 11 VPSSSLCSLGAS---NNNPACNTFNLKRRYEDTEG-SACPCDQYEKKLERKAVTVRGSKS 66
VPSS+L G+S + + A + R G +A P + +KL +KA+ G+ +
Sbjct: 306 VPSSALPVDGSSAPADGSRATSFVVWTRSSHSCSGEAAVPVIEEPQKLLKKALAGGGAWA 365
Query: 67 NR-----------KKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAID 115
N ++ + H ERKRR+K+N+ L+ L+P+ +KVDKAS+L E I
Sbjct: 366 NTNCGGGGTTVTAQENGAKNHVMSERKRREKLNEMFLVLKSLVPSIHKVDKASILAETIA 425
Query: 116 YLKTLQFQV 124
YLK LQ +V
Sbjct: 426 YLKELQRRV 434
>gi|125526531|gb|EAY74645.1| hypothetical protein OsI_02537 [Oryza sativa Indica Group]
Length = 420
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 25 NPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEV--HKRYERK 82
+PA KR D E A + ++L +K V G+ NR + + H ER+
Sbjct: 188 SPASCFVPWKRTELDKE--AVAGGEAAQRLLKKVVGGGGAWMNRAAGSCSIKNHVMSERR 245
Query: 83 RRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPS 137
RR+K+N+ L+ L+P+ +KVDKAS+L E I YLK L+ +V + G V P+
Sbjct: 246 RREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELESGKKVSRPA 300
>gi|328687821|gb|AEB35522.1| MYC2 [Lactuca saligna]
gi|328687823|gb|AEB35523.1| MYC2 [Lactuca saligna]
gi|328687825|gb|AEB35524.1| MYC2 [Lactuca saligna]
gi|328687827|gb|AEB35525.1| MYC2 [Lactuca saligna]
gi|328687829|gb|AEB35526.1| MYC2 [Lactuca saligna]
gi|328687831|gb|AEB35527.1| MYC2 [Lactuca saligna]
gi|328687833|gb|AEB35528.1| MYC2 [Lactuca saligna]
gi|328687835|gb|AEB35529.1| MYC2 [Lactuca saligna]
gi|328687837|gb|AEB35530.1| MYC2 [Lactuca saligna]
gi|328687839|gb|AEB35531.1| MYC2 [Lactuca saligna]
gi|328687841|gb|AEB35532.1| MYC2 [Lactuca saligna]
gi|328687843|gb|AEB35533.1| MYC2 [Lactuca saligna]
gi|328687845|gb|AEB35534.1| MYC2 [Lactuca saligna]
gi|328687847|gb|AEB35535.1| MYC2 [Lactuca saligna]
gi|328687849|gb|AEB35536.1| MYC2 [Lactuca saligna]
gi|328687851|gb|AEB35537.1| MYC2 [Lactuca saligna]
gi|328687853|gb|AEB35538.1| MYC2 [Lactuca saligna]
gi|328687855|gb|AEB35539.1| MYC2 [Lactuca saligna]
gi|328687857|gb|AEB35540.1| MYC2 [Lactuca saligna]
gi|328687859|gb|AEB35541.1| MYC2 [Lactuca saligna]
gi|328687861|gb|AEB35542.1| MYC2 [Lactuca saligna]
gi|328687863|gb|AEB35543.1| MYC2 [Lactuca saligna]
gi|328687865|gb|AEB35544.1| MYC2 [Lactuca saligna]
gi|328687867|gb|AEB35545.1| MYC2 [Lactuca saligna]
gi|328687869|gb|AEB35546.1| MYC2 [Lactuca saligna]
gi|328687871|gb|AEB35547.1| MYC2 [Lactuca saligna]
gi|328687873|gb|AEB35548.1| MYC2 [Lactuca saligna]
Length = 317
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 47 CDQYEKKLERKAVTV---------RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQEL 97
D+ + ER+A+T RG K + P H ER+RR+K+N++ AL+ +
Sbjct: 169 SDEAPARDEREAITTILDEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAV 228
Query: 98 IPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
+PN +K+DKAS+L +AI Y+ LQ +V M
Sbjct: 229 VPNISKMDKASLLGDAITYITDLQKKVKEM 258
>gi|125564328|gb|EAZ09708.1| hypothetical protein OsI_31996 [Oryza sativa Indica Group]
Length = 236
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 55/85 (64%), Gaps = 6/85 (7%)
Query: 51 EKKLERKAVTVRGSKSNRKKR-----TPEVHKRYERKRRDKINKKMRALQELIPNCNKVD 105
+ +E +V + S ++K++ T ++ + + RR++I+++MR LQ L+P C+KV
Sbjct: 42 DASMETSSVVLDTSPQDKKRKPREEDTASLNSAHSKVRRERISERMRMLQALVPGCDKVT 101
Query: 106 -KASMLEEAIDYLKTLQFQVMMMSM 129
KA +L+E I+Y+++LQ QV +SM
Sbjct: 102 GKALILDEIINYVQSLQNQVEFLSM 126
>gi|168042679|ref|XP_001773815.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674930|gb|EDQ61432.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 418
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 70 KRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQV 124
+ T H ER+RR+K+N + AL+ELIPN +K+DKAS+L AI+Y+K LQ Q+
Sbjct: 207 EETSASHVLAERRRREKLNDRFVALRELIPNVSKMDKASILGVAIEYVKELQSQL 261
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 38/47 (80%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R RR++I+++++ LQ LIPN +KVD +MLE+AI Y++ L+FQ+ M+
Sbjct: 838 RVRRERISERLKVLQALIPNGDKVDMVTMLEKAISYVQCLEFQIKML 884
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
Query: 23 NNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERK 82
N+ P + K+R G ++ E++ R+ V VR R+ + + H ER
Sbjct: 119 NSYPRVSESGSKKRKSSRRGKRVKSNEEEEEKTREVVHVRA----RRGQATDSHSLAERV 174
Query: 83 RRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMMMSM 129
RR KIN+++R LQ+++P C K + A ML+E I+Y+++LQ QV +SM
Sbjct: 175 RRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSM 222
>gi|224066289|ref|XP_002302066.1| predicted protein [Populus trichocarpa]
gi|222843792|gb|EEE81339.1| predicted protein [Populus trichocarpa]
Length = 473
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ LQ
Sbjct: 315 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQ 374
Query: 122 FQVMMMSMGTGVC 134
++ + GV
Sbjct: 375 KKIGALETERGVV 387
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 56 RKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAI 114
R+ V VR R+ + + H ER RR KIN+++R LQ+++P C K A ML+E I
Sbjct: 148 REVVHVRA----RRGQATDSHSVAERIRRGKINERLRCLQDIVPGCYKTMGMAVMLDEII 203
Query: 115 DYLKTLQFQVMMMSM 129
+Y+++LQ QV +SM
Sbjct: 204 NYVQSLQNQVEFLSM 218
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 68 RKKRTPEVHKRY--ERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQV 124
R KR H R ER RR KI++++R LQEL+PN K + A ML+ A+DY+K LQ QV
Sbjct: 161 RAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQV 220
Query: 125 MMMSMGTGVC 134
+++ G C
Sbjct: 221 KVLNDGRANC 230
>gi|328687903|gb|AEB35563.1| MYC2 [Lactuca perennis]
gi|328687905|gb|AEB35564.1| MYC2 [Lactuca perennis]
Length = 318
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 9/82 (10%)
Query: 55 ERKAVTV---------RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD 105
ER+A+T RG K + P H ER+RR+K+N++ AL+ ++PN +K+D
Sbjct: 178 EREAITTILDEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMD 237
Query: 106 KASMLEEAIDYLKTLQFQVMMM 127
KAS+L +AI Y+ LQ +V M
Sbjct: 238 KASLLGDAITYITDLQKKVKEM 259
>gi|26449595|dbj|BAC41923.1| putative bHLH transcription factor bHLH026 [Arabidopsis thaliana]
Length = 143
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 30/117 (25%)
Query: 87 INKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIG 146
++ KMR LQ+L+PNC+K DK S+L++ I+Y+K LQ Q+ MMS V + LP +
Sbjct: 1 MSNKMRKLQQLVPNCHKTDKVSVLDKTIEYMKNLQLQLQMMS---TVGVNPYFLPATL-- 55
Query: 147 MQQMHAVAPQMSHFPPMGIGMDGRMQMGA----GCNPAQFLMPPIPGATAVPGIQMP 199
G GM M G NPA +MP + +P + P
Sbjct: 56 -----------------GFGMHNHMLTAMASAHGLNPANHMMP----SPLIPALNWP 91
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR KIN+++R LQ+++P C K + A+ML+E I+Y+++LQ QV
Sbjct: 1042 RRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEF 1101
Query: 127 MSM 129
+SM
Sbjct: 1102 LSM 1104
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMM 126
R RR++I+ +++ LQEL+PN KVD +MLE+AI+Y+K LQ QV +
Sbjct: 374 RHRRERISDRLKILQELVPNSTKVDLVTMLEKAINYVKFLQLQVKV 419
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR++I+++M+ LQ L+P C+K+ KA ML+E I+Y+++LQ QV
Sbjct: 177 RRGQATDSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIINYVQSLQNQVEF 236
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 237 LSMKLASVNP 246
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 8/107 (7%)
Query: 26 PACNTFNLKRRYEDTEGSACPCDQYEKKLE--RKAVTVRGSKSNRKKRTPEVHKRYERKR 83
PAC + LKR + EK+ E R+ V VR R+ + + H ER R
Sbjct: 111 PACES-GLKRGKNSSGRGKRAMKSIEKEDEKPREVVHVRA----RRGQATDSHSLAERVR 165
Query: 84 RDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMMMSM 129
R KIN+++R LQ+++P C K A ML+E I+Y+++LQ QV +SM
Sbjct: 166 RGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSM 212
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQV 124
RK + + H ER RR+KI+++M+ LQ L+P CNKV KA ML+E I+Y+++LQ QV
Sbjct: 135 RKGQATDSHSLVERVRREKISERMKLLQNLVPGCNKVTGKAFMLDEIINYVQSLQRQV 192
>gi|295913612|gb|ADG58051.1| transcription factor [Lycoris longituba]
Length = 95
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 80 ERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSM 129
ER RR++I ++M+ LQ L+P CNK+ KA MLEE I+Y+++LQ QV +SM
Sbjct: 3 ERVRRERIGERMKYLQGLVPGCNKITGKAGMLEEIINYVQSLQRQVEFLSM 53
>gi|224082760|ref|XP_002306828.1| predicted protein [Populus trichocarpa]
gi|222856277|gb|EEE93824.1| predicted protein [Populus trichocarpa]
Length = 466
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 46/73 (63%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI ++ LQ
Sbjct: 308 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITFITDLQ 367
Query: 122 FQVMMMSMGTGVC 134
++ ++ GV
Sbjct: 368 KKIRVLETERGVV 380
>gi|4567302|gb|AAD23713.1| unknown protein [Arabidopsis thaliana]
Length = 226
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 75 VHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSMGTGV 133
+H + RR+KIN +M+ LQEL+P C+K+ A +L+E I++++TLQ QV M+SM
Sbjct: 147 IHNLTDMARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVEMLSMRLAA 206
Query: 134 CMPSM 138
P +
Sbjct: 207 VNPRI 211
>gi|359479613|ref|XP_002282584.2| PREDICTED: transcription factor bHLH3-like [Vitis vinifera]
Length = 491
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ LQ
Sbjct: 332 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAISYITDLQ 391
Query: 122 FQVMMM 127
++ ++
Sbjct: 392 MKIRIL 397
>gi|326519825|dbj|BAK00285.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 7/85 (8%)
Query: 53 KLERKAVTVRGSKSNRKKRTPEVHKRY--ERKRRDKINKKMRALQELIPNCNK-VDKASM 109
+L++ +V R R KR H R ER+RR +I+K++R LQ+L+PN +K + + M
Sbjct: 290 QLQQDSVACR----VRAKRGCATHPRSIAERERRTRISKRLRRLQDLVPNMDKQTNTSDM 345
Query: 110 LEEAIDYLKTLQFQVMMMSMGTGVC 134
L+ A+DY+K LQ Q+ + G C
Sbjct: 346 LDIAVDYIKVLQDQIEKLKQDQGNC 370
>gi|195638946|gb|ACG38941.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 410
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 80 ERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM-----GTGVC 134
ERKRR K+N+++ L+ L+PN +K+D+A++L +AIDY+ LQ QV + G
Sbjct: 152 ERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKALQDELEDPADGAG 211
Query: 135 MPSMML----PTGIIGMQQMHAVAPQMSHFPPM 163
P ++L P ++G++ +P SH P+
Sbjct: 212 APDVLLDHPPPASLVGLENDE--SPPTSHQHPL 242
>gi|334186200|ref|NP_001190160.1| transcription factor PIF6 [Arabidopsis thaliana]
gi|332646787|gb|AEE80308.1| transcription factor PIF6 [Arabidopsis thaliana]
Length = 324
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 57/116 (49%), Gaps = 21/116 (18%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMML 140
R R+ + +K A E + + D SML+EAI+Y+ LQ QV MM+MG PSMM+
Sbjct: 161 RTRKALVKRKRNA--EAYNSPERDDNESMLDEAINYMTNLQLQVQMMTMGNRFVTPSMMM 218
Query: 141 PTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFLMPPIPGATAVPGI 196
P G ++ MG+ M MQMG QFL + GA +PGI
Sbjct: 219 PLG--------------PNYSQMGLAMGVGMQMGE----QQFLPAHVLGA-GLPGI 255
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR KIN+++R LQ+++P C K + A+ML+E I+Y+++LQ QV
Sbjct: 1031 RRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEF 1090
Query: 127 MSM 129
+SM
Sbjct: 1091 LSM 1093
>gi|225453582|ref|XP_002266775.1| PREDICTED: transcription factor MYC2-like [Vitis vinifera]
Length = 497
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 27 ACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDK 86
C + L+ + D++ CP +E++ RG K + P H ER+RR+K
Sbjct: 272 GCQSLCLESEHSDSD---CPL--VAVTVEKRVPKKRGRKPRLGRDAPLNHVEAERQRREK 326
Query: 87 INKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQV 124
+N + AL+ ++PN +++DKAS+L +A+ Y+ L+ +V
Sbjct: 327 LNHRFYALRAVVPNVSRMDKASLLADAVSYINELKAKV 364
>gi|52075730|dbj|BAD44950.1| regulatory protein B-Peru-like [Oryza sativa Japonica Group]
gi|52077560|dbj|BAD45121.1| regulatory protein B-Peru-like [Oryza sativa Japonica Group]
Length = 370
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 4/127 (3%)
Query: 13 SSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRT 72
SS + L + +PA KR D E A + ++L +K V G+ NR +
Sbjct: 126 SSWIELLDHAIVSPASCFVPWKRTELDKE--AVAGGEAAQRLLKKVVGGGGAWMNRAAGS 183
Query: 73 PEV--HKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMG 130
+ H ER+RR+K+N+ L+ L+P+ +KVDKAS+L E I YLK L+ +V + G
Sbjct: 184 CSIKNHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELESG 243
Query: 131 TGVCMPS 137
V P+
Sbjct: 244 KKVSRPA 250
>gi|224079313|ref|XP_002305819.1| predicted protein [Populus trichocarpa]
gi|222848783|gb|EEE86330.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 56 RKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAI 114
++ + VR ++ + + H ER RR+KIN K+R LQ+++P C+K + A MLEE I
Sbjct: 153 KEVIHVRA----KRGQATDSHSIAERIRREKINNKLRCLQDIVPGCHKSMGMAVMLEEII 208
Query: 115 DYLKTLQFQVMMMSM 129
+Y+ +LQ QV +SM
Sbjct: 209 NYVHSLQNQVEFLSM 223
>gi|255559983|ref|XP_002521010.1| DNA binding protein, putative [Ricinus communis]
gi|223539847|gb|EEF41427.1| DNA binding protein, putative [Ricinus communis]
Length = 503
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ LQ
Sbjct: 344 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQ 403
Query: 122 FQVMMM 127
++ ++
Sbjct: 404 TKIRVL 409
>gi|449520908|ref|XP_004167474.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ R H ER RR+KI+++M+ LQ+L+P C+++ K +L+E I+Y+++LQ QV +
Sbjct: 208 RRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQITGKTVVLDEIINYVQSLQQQVEL 267
Query: 127 MSM 129
+SM
Sbjct: 268 LSM 270
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR KIN+++R LQ+++P C K + A+ML+E I+Y+++LQ QV
Sbjct: 148 RRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEF 207
Query: 127 MSM 129
+SM
Sbjct: 208 LSM 210
>gi|413954820|gb|AFW87469.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 359
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN +M L+EL+P C+KV A +L+E I+++++LQ QV
Sbjct: 183 RRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEY 242
Query: 127 MSM 129
+SM
Sbjct: 243 LSM 245
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQV 124
R+ + + H ER RR+KI ++M+ LQ+L+P C+KV KA ML+E I+Y+++LQ QV
Sbjct: 259 RRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 316
>gi|357126351|ref|XP_003564851.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 373
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 7/85 (8%)
Query: 53 KLERKAVTVRGSKSNRKKRTPEVHKRY--ERKRRDKINKKMRALQELIPNCNK-VDKASM 109
+L++ +V R R KR H R ER+RR +I+K++R LQ+L+PN +K + + M
Sbjct: 285 QLQQDSVACR----VRAKRGCATHPRSIAERERRTRISKRLRKLQDLVPNMDKQTNTSDM 340
Query: 110 LEEAIDYLKTLQFQVMMMSMGTGVC 134
L+ A+DY+K LQ Q+ + G C
Sbjct: 341 LDIAVDYIKVLQDQIEKLKQDQGNC 365
>gi|302759943|ref|XP_002963394.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
gi|300168662|gb|EFJ35265.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
Length = 459
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
R RR++I+ K+R LQ L+P K+D ASML+EAI Y+K L+ QV M M
Sbjct: 299 RHRRERISTKIRILQRLVPGGTKMDTASMLDEAIHYVKYLKSQVQAMEM 347
>gi|297735523|emb|CBI17963.3| unnamed protein product [Vitis vinifera]
Length = 485
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ LQ
Sbjct: 296 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAISYITDLQ 355
Query: 122 FQVMMM 127
++ ++
Sbjct: 356 MKIRIL 361
>gi|223974811|gb|ACN31593.1| unknown [Zea mays]
Length = 403
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 80 ERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM-----GTGVC 134
ERKRR K+N+++ L+ L+PN +K+D+A++L +AIDY+ LQ QV + G
Sbjct: 146 ERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKALQDELEDPADGAG 205
Query: 135 MPSMML----PTGIIGMQQMHAVAPQMSHFPPM 163
P ++L P ++G++ +P SH P+
Sbjct: 206 APDVLLDHPPPASLVGLENDE--SPPTSHQHPL 236
>gi|10177170|dbj|BAB10359.1| unnamed protein product [Arabidopsis thaliana]
Length = 239
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 38/48 (79%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+ RR++I+++++ LQEL+PN KVD +MLE+AI Y+K LQ QV +++
Sbjct: 149 KNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVLA 196
>gi|326518866|dbj|BAJ92594.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 561
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 18/106 (16%)
Query: 33 LKRRYEDTEGSACPCDQYEKKLERKAV--------------TVRGSKSNRKKRTPEVHKR 78
KR ++ E A P +KL +KA+ T R +S+ K H
Sbjct: 333 WKRSWDSAEDMAAPVAGQSQKLLKKALAGGVWAINGGGGGGTARAQESSNTKN----HVI 388
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQV 124
ER+RR+K+N+ L+ L+P+ +KVDKAS+L E I YL+ L+ +V
Sbjct: 389 SERRRREKLNEMFLILKSLVPSIHKVDKASILAETIAYLRELEQRV 434
>gi|449445714|ref|XP_004140617.1| PREDICTED: transcription factor ATR2-like [Cucumis sativus]
Length = 431
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K N K H ER+RR+K+N + AL+ ++PN +++DKAS+L +A+ Y+ L+
Sbjct: 238 RGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAVSYINALK 297
Query: 122 FQVMMMSM 129
+V M +
Sbjct: 298 AKVEEMEL 305
>gi|449519754|ref|XP_004166899.1| PREDICTED: transcription factor ATR2-like [Cucumis sativus]
Length = 431
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K N K H ER+RR+K+N + AL+ ++PN +++DKAS+L +A+ Y+ L+
Sbjct: 238 RGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAVSYINALK 297
Query: 122 FQVMMMSM 129
+V M +
Sbjct: 298 AKVEEMEL 305
>gi|339716196|gb|AEJ88337.1| putative MYC protein, partial [Tamarix hispida]
Length = 521
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 37 YEDTEGSACPCDQYEKKLE--RKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRAL 94
+ D E S D + ++ K RG K + P H ER+RR+K+N++ AL
Sbjct: 413 HSDLEASVKEADSASRVVDPAEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYAL 472
Query: 95 QELIPNCNKVDKASMLEEAIDYLKTLQ 121
+ ++PN +K+DKAS+L +AI Y+K L+
Sbjct: 473 RAVVPNVSKMDKASLLGDAISYIKELK 499
>gi|312985092|gb|ADR30705.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985094|gb|ADR30706.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985096|gb|ADR30707.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985098|gb|ADR30708.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985100|gb|ADR30709.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985102|gb|ADR30710.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
gi|312985104|gb|ADR30711.1| putative bHLH domain protein [Hordeum vulgare subsp. vulgare]
Length = 559
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 18/106 (16%)
Query: 33 LKRRYEDTEGSACPCDQYEKKLERKAV--------------TVRGSKSNRKKRTPEVHKR 78
KR ++ E A P +KL +KA+ T R +S+ K H
Sbjct: 331 WKRSWDSAEDMAAPVAGQSQKLLKKALAGGVWAINGGGGGGTARAQESSNTKN----HVI 386
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQV 124
ER+RR+K+N+ L+ L+P+ +KVDKAS+L E I YL+ L+ +V
Sbjct: 387 SERRRREKLNEMFLILKSLVPSIHKVDKASILAETIAYLRELEQRV 432
>gi|356528881|ref|XP_003533026.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 443
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM-SMGTGV 133
R RR++IN+K+R LQ+L+P +K+D ASML+EA +YLK L+ QV + S+G V
Sbjct: 350 RHRRERINEKIRVLQKLVPGGSKMDTASMLDEAANYLKFLRSQVKALESLGNKV 403
>gi|295913280|gb|ADG57897.1| transcription factor [Lycoris longituba]
Length = 176
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN +M+ LQEL+P C+K+ A +L+E I+++++LQ +V
Sbjct: 10 RRGQATDSHSLAERARREKINARMKLLQELVPGCSKISGTALVLDEIINHVQSLQREVEF 69
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 70 LSMRLAAVNPRI 81
>gi|294462391|gb|ADE76744.1| unknown [Picea sitchensis]
Length = 222
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 10/119 (8%)
Query: 13 SSSLCSLGASNNNPACNTFNLKRRYEDTEG-SACPCDQYEKKLERKAVTVRGSKSNRKKR 71
SSS+ + N+NP + R E +E + D+ + K ++ + +R R+ +
Sbjct: 67 SSSIYNDHEQNSNPKSDVI----RGESSELLTNSVKDEPKNKSQKDYIHLRS----RRGQ 118
Query: 72 TPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMMMSM 129
H ER RR+KI+++M+ LQ+L+P CNKV KA +LE I+Y+++LQ QV ++S+
Sbjct: 119 ATNSHSLAERVRREKISERMKVLQDLVPGCNKVTGKALVLENIINYVQSLQSQVEILSV 177
>gi|413954819|gb|AFW87468.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 372
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASM-LEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN +M L+EL+P C+KV ++ L+E I+++++LQ QV
Sbjct: 196 RRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEY 255
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 256 LSMRLAAVNP 265
>gi|297606176|ref|NP_001058071.2| Os06g0613500 [Oryza sativa Japonica Group]
gi|255677227|dbj|BAF19985.2| Os06g0613500, partial [Oryza sativa Japonica Group]
Length = 178
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 12/118 (10%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN +M L+EL+P C+KV A +L+E I+++++LQ QV
Sbjct: 2 RRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEY 61
Query: 127 MSMGTGVCMPSM-------MLPTG---IIGMQQMHAVAPQMSHFPPMGI-GMDGRMQM 173
+SM P + L T I G+ + + + +P MG+ G MQ+
Sbjct: 62 LSMRLAAVNPRVDFGGLDNFLTTECGRITGLNYKNGMDLEQVTWPDMGVHGARNLMQL 119
>gi|295881158|gb|ADG56511.1| basic helix-loop-helix protein [Hordeum vulgare subsp. vulgare]
Length = 559
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 18/106 (16%)
Query: 33 LKRRYEDTEGSACPCDQYEKKLERKAV--------------TVRGSKSNRKKRTPEVHKR 78
KR ++ E A P +KL +KA+ T R +S+ K H
Sbjct: 331 WKRSWDSAEDMAAPVAGQSQKLLKKALAGGVWAINGGGGGGTARAQESSNTKN----HVI 386
Query: 79 YERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQV 124
ER+RR+K+N+ L+ L+P+ +KVDKAS+L E I YL+ L+ +V
Sbjct: 387 SERRRREKLNEMFLILKSLVPSIHKVDKASILAETIAYLRELEQRV 432
>gi|194690494|gb|ACF79331.1| unknown [Zea mays]
gi|223947463|gb|ACN27815.1| unknown [Zea mays]
gi|413926617|gb|AFW66549.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 409
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 80 ERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM-----GTGVC 134
ERKRR K+N+++ L+ L+PN +K+D+A++L +AIDY+ LQ QV + G
Sbjct: 152 ERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKALQDELEDPADGAG 211
Query: 135 MPSMML----PTGIIGMQQMHAVAPQMSHFPPM 163
P ++L P ++G++ +P SH P+
Sbjct: 212 APDVLLDHPPPASLVGLENDE--SPPTSHQHPL 242
>gi|357130817|ref|XP_003567042.1| PREDICTED: uncharacterized protein LOC100822019 [Brachypodium
distachyon]
Length = 397
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTG 132
R RR++++ ++R LQ+L+P +K+D ASML+EA YLK L+ QV + G G
Sbjct: 294 RLRRERVSDRLRVLQKLVPGGSKMDTASMLDEAASYLKFLRSQVQALETGNG 345
>gi|413926618|gb|AFW66550.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 440
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 80 ERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM-----GTGVC 134
ERKRR K+N+++ L+ L+PN +K+D+A++L +AIDY+ LQ QV + G
Sbjct: 183 ERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKALQDELEDPADGAG 242
Query: 135 MPSMML----PTGIIGMQQMHAVAPQMSHFPPM 163
P ++L P ++G++ +P SH P+
Sbjct: 243 APDVLLDHPPPASLVGLENDE--SPPTSHQHPL 273
>gi|195629918|gb|ACG36600.1| hypothetical protein [Zea mays]
Length = 409
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 80 ERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM-----GTGVC 134
ERKRR K+N+++ L+ L+PN +K+D+A++L +AIDY+ LQ QV + G
Sbjct: 152 ERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKALQDELEDPADGAG 211
Query: 135 MPSMML----PTGIIGMQQMHAVAPQMSHFPPM 163
P ++L P ++G++ +P SH P+
Sbjct: 212 APDVLLDHPPPASLVGLENDE--SPPTSHQHPL 242
>gi|356504177|ref|XP_003520875.1| PREDICTED: transcription factor bHLH13-like [Glycine max]
Length = 550
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 39 DTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELI 98
D E S C +Q ERK RG K + P H ER+RR+K+N++ AL+ ++
Sbjct: 355 DVEAS-CKEEQPSVADERKPRK-RGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVV 412
Query: 99 PNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
PN +K+DKAS+L + I Y+ LQ +V +M
Sbjct: 413 PNISKMDKASLLGDTIAYINELQAKVKIM 441
>gi|242075762|ref|XP_002447817.1| hypothetical protein SORBIDRAFT_06g016380 [Sorghum bicolor]
gi|241939000|gb|EES12145.1| hypothetical protein SORBIDRAFT_06g016380 [Sorghum bicolor]
Length = 572
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 10/99 (10%)
Query: 35 RRYEDTEGSACPCDQYEKKLERKAVT---------VRGSKSNRKKRTPEVHKRYERKRRD 85
R Y D E +A P + +KL +K V+ V G+ ++ + H ERKRR+
Sbjct: 348 RSYSD-EAAAVPAVEEPQKLLKKVVSGGRAWANCGVGGTVRTAQESGIKNHVMSERKRRE 406
Query: 86 KINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQV 124
K+N+ L+ L+P+ KVDK S+L E I YLK LQ +V
Sbjct: 407 KLNEMFLILKLLVPSIQKVDKVSILAETIAYLKELQRKV 445
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR KIN+++R LQ+++P C K + A+ML+E I+Y+++LQ QV +
Sbjct: 151 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKSMGMATMLDEIINYVQSLQNQVEL 210
Query: 127 MSM 129
+SM
Sbjct: 211 LSM 213
>gi|302785816|ref|XP_002974679.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
gi|300157574|gb|EFJ24199.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
Length = 520
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
R RR++I+ K+R LQ L+P K+D ASML+EAI Y+K L+ QV M M
Sbjct: 300 RHRRERISTKIRILQRLVPGGTKMDTASMLDEAIHYVKYLKSQVQAMEM 348
>gi|297851702|ref|XP_002893732.1| ATMYC2 [Arabidopsis lyrata subsp. lyrata]
gi|297339574|gb|EFH69991.1| ATMYC2 [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 43/64 (67%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 441 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELK 500
Query: 122 FQVM 125
+V+
Sbjct: 501 SKVV 504
>gi|255557569|ref|XP_002519814.1| Transcription factor AtMYC2, putative [Ricinus communis]
gi|223540860|gb|EEF42418.1| Transcription factor AtMYC2, putative [Ricinus communis]
Length = 663
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 41/60 (68%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+K L+
Sbjct: 472 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 531
>gi|15240346|ref|NP_198596.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
gi|218563533|sp|Q9FJ00.2|BH086_ARATH RecName: Full=Putative transcription factor bHLH086; AltName:
Full=Basic helix-loop-helix protein 86; Short=AtbHLH86;
Short=bHLH 86; AltName: Full=Transcription factor EN
113; AltName: Full=bHLH transcription factor bHLH086
gi|332006851|gb|AED94234.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
Length = 307
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 38/48 (79%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+ RR++I+++++ LQEL+PN KVD +MLE+AI Y+K LQ QV +++
Sbjct: 217 KNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVLA 264
>gi|356499097|ref|XP_003518380.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 295
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 39/48 (81%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+ RR++I+++++ LQEL+PN +KVD +MLE+AI Y+K LQ QV +++
Sbjct: 218 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 265
>gi|218198545|gb|EEC80972.1| hypothetical protein OsI_23697 [Oryza sativa Indica Group]
Length = 286
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 12/118 (10%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN +M L+EL+P C+KV A +L+E I+++++LQ QV
Sbjct: 110 RRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEY 169
Query: 127 MSMGTGVCMPSM-------MLPTG---IIGMQQMHAVAPQMSHFPPMGI-GMDGRMQM 173
+SM P + L T I G+ + + + +P MG+ G MQ+
Sbjct: 170 LSMRLAAVNPRVDFGGLDNFLTTECGRITGLNYKNGMDLEQVTWPDMGVHGARNLMQL 227
>gi|242084062|ref|XP_002442456.1| hypothetical protein SORBIDRAFT_08g020280 [Sorghum bicolor]
gi|241943149|gb|EES16294.1| hypothetical protein SORBIDRAFT_08g020280 [Sorghum bicolor]
Length = 219
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 51 EKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNC-NKVDKASM 109
+ KL+ K T + R E H E++RR KI +K++ LQ+L+P C N ++AS
Sbjct: 142 DHKLQEKRKTSSTGRGKRSHHHAEAHSLTEKRRRLKIKEKLKTLQQLVPGCPNNSNQAST 201
Query: 110 LEEAIDYLKTLQFQVMMM 127
L++ I Y+K+LQ ++ +
Sbjct: 202 LDQTIRYIKSLQQHILQV 219
>gi|449450566|ref|XP_004143033.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ R H ER RR+KI+++M+ LQ+L+P C+++ K +L+E I+Y+++LQ QV
Sbjct: 208 RRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQITGKTVVLDEIINYVQSLQQQVEF 267
Query: 127 MSM 129
+SM
Sbjct: 268 LSM 270
>gi|168019991|ref|XP_001762527.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686260|gb|EDQ72650.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 594
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS-MGTGVCMPSMM 139
R RR++I+ ++R LQ L+P K+D ASML+EAI Y+K L+ Q+ + +G C P
Sbjct: 448 RHRRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKLQLQTLEQIGNNGCDPRSF 507
Query: 140 LPTG 143
L G
Sbjct: 508 LEQG 511
>gi|356536812|ref|XP_003536928.1| PREDICTED: transcription factor bHLH3-like [Glycine max]
Length = 504
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 44/66 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI ++ LQ
Sbjct: 343 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITFITDLQ 402
Query: 122 FQVMMM 127
++ ++
Sbjct: 403 MKIKVL 408
>gi|224033315|gb|ACN35733.1| unknown [Zea mays]
gi|238015234|gb|ACR38652.1| unknown [Zea mays]
gi|413926622|gb|AFW66554.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413926623|gb|AFW66555.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 594
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 80 ERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM-----GTGVC 134
ERKRR K+N+++ L+ L+PN +K+D+A++L +AIDY+ LQ QV + G
Sbjct: 337 ERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKALQDELEDPADGAG 396
Query: 135 MPSMML----PTGIIGMQQMHAVAPQMSHFPPM 163
P ++L P ++G++ +P SH P+
Sbjct: 397 APDVLLDHPPPASLVGLENDE--SPPTSHQHPL 427
>gi|297597059|ref|NP_001043392.2| Os01g0577300 [Oryza sativa Japonica Group]
gi|125570917|gb|EAZ12432.1| hypothetical protein OsJ_02326 [Oryza sativa Japonica Group]
gi|255673385|dbj|BAF05306.2| Os01g0577300 [Oryza sativa Japonica Group]
Length = 265
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 4/127 (3%)
Query: 13 SSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRT 72
SS + L + +PA KR D E A + ++L +K V G+ NR +
Sbjct: 21 SSWIELLDHAIVSPASCFVPWKRTELDKE--AVAGGEAAQRLLKKVVGGGGAWMNRAAGS 78
Query: 73 PEV--HKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMG 130
+ H ER+RR+K+N+ L+ L+P+ +KVDKAS+L E I YLK L+ +V + G
Sbjct: 79 CSIKNHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELESG 138
Query: 131 TGVCMPS 137
V P+
Sbjct: 139 KKVSRPA 145
>gi|222635879|gb|EEE66011.1| hypothetical protein OsJ_21966 [Oryza sativa Japonica Group]
Length = 325
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 12/118 (10%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN +M L+EL+P C+KV A +L+E I+++++LQ QV
Sbjct: 149 RRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEY 208
Query: 127 MSMGTGVCMPSM-------MLPTG---IIGMQQMHAVAPQMSHFPPMGI-GMDGRMQM 173
+SM P + L T I G+ + + + +P MG+ G MQ+
Sbjct: 209 LSMRLAAVNPRVDFGGLDNFLTTECGRITGLNYKNGMDLEQVTWPDMGVHGARNLMQL 266
>gi|225458639|ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|302142304|emb|CBI19507.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMG-----TGVCM 135
R RR++I++K+R LQ L+P K+D ASML+EAI Y+K L+ QV + G+
Sbjct: 161 RHRRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPAGIGF 220
Query: 136 PSMMLPTGIIGMQQMHAVAPQMSHFP 161
P M + + + + + + H+P
Sbjct: 221 PVTMSNGSYLPITKQYQPSQNLHHYP 246
>gi|356548045|ref|XP_003542414.1| PREDICTED: transcription factor bHLH3-like [Glycine max]
Length = 478
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 44/66 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI ++ LQ
Sbjct: 316 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITFITDLQ 375
Query: 122 FQVMMM 127
++ ++
Sbjct: 376 MKIKVL 381
>gi|6899919|emb|CAB71869.1| putative protein [Arabidopsis thaliana]
Length = 359
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 27/131 (20%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV--DKASMLEEAIDYLKTLQFQVM 125
++KR E + ER + +Q ++ + D SML+EAI+Y+ LQ QV
Sbjct: 185 KRKRNAEAYNSPERV------SNLFKIQSIVNTESDTTDDNESMLDEAINYMTNLQLQVQ 238
Query: 126 MMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPAQFLMP 185
MM+MG PSMM+P G ++ MG+ M MQMG QFL
Sbjct: 239 MMTMGNRFVTPSMMMPLG--------------PNYSQMGLAMGVGMQMGE----QQFLPA 280
Query: 186 PIPGATAVPGI 196
+ GA +PGI
Sbjct: 281 HVLGA-GLPGI 290
>gi|242052339|ref|XP_002455315.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
gi|241927290|gb|EES00435.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
Length = 290
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 83 RRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
RR+KI +K++ LQ+L+PN KVD +MLE+AI Y+K LQ QV +++
Sbjct: 212 RREKIAEKLKVLQDLVPNGTKVDLVTMLEKAITYVKFLQLQVKVLA 257
>gi|18402256|ref|NP_566639.1| transcription factor bHLH113 [Arabidopsis thaliana]
gi|75311549|sp|Q9LT67.1|BH113_ARATH RecName: Full=Transcription factor bHLH113; AltName: Full=Basic
helix-loop-helix protein 113; Short=AtbHLH113;
Short=bHLH 113; AltName: Full=Transcription factor EN
61; AltName: Full=bHLH transcription factor bHLH113
gi|11994473|dbj|BAB02475.1| unnamed protein product [Arabidopsis thaliana]
gi|332642727|gb|AEE76248.1| transcription factor bHLH113 [Arabidopsis thaliana]
Length = 270
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 28/159 (17%)
Query: 7 IEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAV-TVRGSK 65
+EP VP+S G S+ +P+C + + + AC D+ K +K T G +
Sbjct: 81 LEPSVPTS-----GVSDLDPSCIKIDCRNSND-----ACTVDKSTKSSTKKRTGTGNGQE 130
Query: 66 SNRKKRTPEVHKRYERK--------RRDKINKKMRALQELIPNCNKVDKASMLEEAIDYL 117
S++ ++ + KR + K R++++ +++ ALQ+L+ K D AS+L EA+ Y+
Sbjct: 131 SDQNRKPGKKGKRNQEKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYI 190
Query: 118 KTLQFQVMMMSMGTGVCMPSMM---LPTGIIGMQQMHAV 153
K LQ Q+ ++ C P ++ L G++ M A+
Sbjct: 191 KFLQDQIQVL------CSPYLINHSLDGGVVTGDVMAAM 223
>gi|147821091|emb|CAN75381.1| hypothetical protein VITISV_027596 [Vitis vinifera]
Length = 328
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Query: 79 YERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPS 137
Y RR+KI+++M+ LQ+L+P CNKV KA +L+E I+Y+++LQ QV +SM
Sbjct: 215 YINARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR 274
Query: 138 MM-----LPTGIIGMQQMHAVA 154
M P +G+Q A A
Sbjct: 275 MNHTVEGFPLKDLGVQTFDAAA 296
>gi|413943655|gb|AFW76304.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 370
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN +M L+EL+P C+KV A +L+E I+++++LQ QV
Sbjct: 160 RRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEY 219
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 220 LSMRLATVNP 229
>gi|194707424|gb|ACF87796.1| unknown [Zea mays]
gi|238014816|gb|ACR38443.1| unknown [Zea mays]
gi|413926620|gb|AFW66552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 557
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 80 ERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM-----GTGVC 134
ERKRR K+N+++ L+ L+PN +K+D+A++L +AIDY+ LQ QV + G
Sbjct: 300 ERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKALQDELEDPADGAG 359
Query: 135 MPSMML----PTGIIGMQQMHAVAPQMSHFPPM 163
P ++L P ++G++ +P SH P+
Sbjct: 360 APDVLLDHPPPASLVGLENDE--SPPTSHQHPL 390
>gi|413926619|gb|AFW66551.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 526
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 80 ERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM-----GTGVC 134
ERKRR K+N+++ L+ L+PN +K+D+A++L +AIDY+ LQ QV + G
Sbjct: 269 ERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKALQDELEDPADGAG 328
Query: 135 MPSMML----PTGIIGMQQMHAVAPQMSHFPPM 163
P ++L P ++G++ +P SH P+
Sbjct: 329 APDVLLDHPPPASLVGLENDE--SPPTSHQHPL 359
>gi|297801316|ref|XP_002868542.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314378|gb|EFH44801.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 300
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 38/48 (79%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+ RR++I+++++ LQEL+PN KVD +MLE+AI Y+K LQ QV +++
Sbjct: 217 KNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVLA 264
>gi|357147532|ref|XP_003574381.1| PREDICTED: transcription factor MYC4-like [Brachypodium distachyon]
Length = 706
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 51 EKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASML 110
E+K RK RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L
Sbjct: 509 EEKRPRK----RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLL 564
Query: 111 EEAIDYLKTLQ 121
+AI Y+ L+
Sbjct: 565 GDAISYINELR 575
>gi|226497322|ref|NP_001142164.1| uncharacterized protein LOC100274330 [Zea mays]
gi|224031213|gb|ACN34682.1| unknown [Zea mays]
gi|413926621|gb|AFW66553.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 625
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 80 ERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM-----GTGVC 134
ERKRR K+N+++ L+ L+PN +K+D+A++L +AIDY+ LQ QV + G
Sbjct: 368 ERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKALQDELEDPADGAG 427
Query: 135 MPSMML----PTGIIGMQQMHAVAPQMSHFPPM 163
P ++L P ++G++ +P SH P+
Sbjct: 428 APDVLLDHPPPASLVGLENDE--SPPTSHQHPL 458
>gi|449445206|ref|XP_004140364.1| PREDICTED: putative transcription factor bHLH086-like [Cucumis
sativus]
Length = 284
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 39/48 (81%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+ RR++I+++++ LQEL+PN +KVD +MLE+AI Y+K LQ QV +++
Sbjct: 197 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILA 244
>gi|297838323|ref|XP_002887043.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332884|gb|EFH63302.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 38/48 (79%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+ RR++I+++++ LQEL+PN KVD +MLE+AI Y+K LQ QV +++
Sbjct: 209 KNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLA 256
>gi|413947161|gb|AFW79810.1| hypothetical protein ZEAMMB73_605816 [Zea mays]
Length = 325
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 83 RRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
RR+KI +K++ LQ+L+PN KVD +MLE+AI Y+K LQ QV +++
Sbjct: 246 RREKIAEKLKVLQDLVPNGTKVDLVTMLEKAITYVKFLQLQVKVLA 291
>gi|119655907|gb|ABL86246.1| BHLHogu [Brassica rapa subsp. chinensis]
Length = 122
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN +M+ L+EL+P C+K+ A +L+E I+++++LQ QV M
Sbjct: 36 RRGQATDSHSLAERARREKINARMKLLRELVPGCDKIQGTALVLDEIINHVQSLQRQVEM 95
Query: 127 MSMGTGVCMPSM 138
+SM P +
Sbjct: 96 LSMRLAAVNPRI 107
>gi|18026960|gb|AAL55713.1|AF251691_1 putative transcription factor BHLH6 [Arabidopsis thaliana]
Length = 623
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 43/64 (67%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 439 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELK 498
Query: 122 FQVM 125
+V+
Sbjct: 499 SKVV 502
>gi|356569373|ref|XP_003552876.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 39/48 (81%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+ RR++I+++++ LQEL+PN +KVD +MLE+AI Y+K LQ QV +++
Sbjct: 255 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 302
>gi|356537912|ref|XP_003537450.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 39/48 (81%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+ RR++I+++++ LQEL+PN +KVD +MLE+AI Y+K LQ QV +++
Sbjct: 255 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 302
>gi|296278595|gb|ADH04262.1| bHLH1 transcription factor [Nicotiana benthamiana]
Length = 680
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 487 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELK 546
Query: 122 FQV 124
++
Sbjct: 547 LKL 549
>gi|77556450|gb|ABA99246.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|218187186|gb|EEC69613.1| hypothetical protein OsI_38987 [Oryza sativa Indica Group]
gi|222617411|gb|EEE53543.1| hypothetical protein OsJ_36752 [Oryza sativa Japonica Group]
Length = 265
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 48 DQYEKKLERKAVTVRGSKSNRKKRTP---EVHKRYERKRRDKINKKMRALQELIPNCNKV 104
++ +KKL + R K ++ +R P E H E++RR +IN+K + LQ L+P C+K
Sbjct: 127 EKMDKKLPTRTEERRRVK-HKARRNPGYAETHGLTEKRRRSRINEKFKMLQRLVPGCDKC 185
Query: 105 DKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGI 144
++S L+ I Y+K+LQ Q+ M P+M+ P +
Sbjct: 186 SQSSTLDRTIHYMKSLQQQLQAM-------YPTMVRPAAV 218
>gi|334182257|ref|NP_001184895.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|4587574|gb|AAD25805.1|AC006550_13 Contains PF|00010 helix-loop-helix DNA-binding domain. ESTs
gb|T45640 and gb|T22783 come from this gene [Arabidopsis
thaliana]
gi|332189398|gb|AEE27519.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 297
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 9/112 (8%)
Query: 34 KRRYEDTEGSAC-----PCDQYEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKIN 88
KR +D + C P Q + + T+R R+ + + H ER RR++I
Sbjct: 103 KRFQDDVLDNRCSSMKPPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERIA 162
Query: 89 KKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM----GTGVCMP 136
+++R+LQEL+P NK D+A+M++E +DY+K L+ QV ++SM G G P
Sbjct: 163 ERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAP 214
>gi|414867852|tpg|DAA46409.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 705
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 514 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELR 573
>gi|224028647|gb|ACN33399.1| unknown [Zea mays]
Length = 178
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%), Gaps = 6/52 (11%)
Query: 109 MLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHF 160
ML+EAI+YLKTLQ QV MM+MG+G+C+P M+LP + M P ++HF
Sbjct: 1 MLDEAIEYLKTLQLQVQMMAMGSGLCIPPMLLP------RAMQLQIPSIAHF 46
>gi|255583421|ref|XP_002532470.1| DNA binding protein, putative [Ricinus communis]
gi|223527828|gb|EEF29926.1| DNA binding protein, putative [Ricinus communis]
Length = 327
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 39/48 (81%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+ RR++I+++++ LQEL+PN +KVD +MLE+AI Y+K LQ QV +++
Sbjct: 241 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 288
>gi|15223256|ref|NP_174541.1| transcription factor MYC2 [Arabidopsis thaliana]
gi|34222779|sp|Q39204.2|RAP1_ARATH RecName: Full=Transcription factor MYC2; Short=AtMYC2; AltName:
Full=Basic helix-loop-helix protein 6; Short=AtbHLH6;
Short=bHLH 6; AltName: Full=Protein JASMONATE
INSENSITIVE 1; AltName: Full=R-homologous Arabidopsis
protein 1; Short=RAP-1; AltName: Full=Transcription
factor EN 38; AltName: Full=Z-box binding factor 1
protein; AltName: Full=bHLH transcription factor
bHLH006; AltName: Full=rd22BP1
gi|6714284|gb|AAF25980.1|AC017118_17 F6N18.4 [Arabidopsis thaliana]
gi|14335048|gb|AAK59788.1| At1g32640/F6N18_4 [Arabidopsis thaliana]
gi|27764972|gb|AAO23607.1| At1g32640/F6N18_4 [Arabidopsis thaliana]
gi|57336395|emb|CAH58735.1| Z-box binding factor 1 protein [Arabidopsis thaliana]
gi|197116074|emb|CAA67885.2| bHLH protein [Arabidopsis thaliana]
gi|332193392|gb|AEE31513.1| transcription factor MYC2 [Arabidopsis thaliana]
Length = 623
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 43/64 (67%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 439 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELK 498
Query: 122 FQVM 125
+V+
Sbjct: 499 SKVV 502
>gi|356551793|ref|XP_003544258.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 110
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 39/48 (81%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+ RR++I+++++ LQEL+PN +KVD +MLE+AI Y+K LQ QV +++
Sbjct: 33 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 80
>gi|4321762|gb|AAD15818.1| transcription factor MYC7E [Zea mays]
Length = 702
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 511 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELR 570
>gi|168025464|ref|XP_001765254.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683573|gb|EDQ69982.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 800
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTL 120
RG K + P H + ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L
Sbjct: 573 RGRKPANDREEPLSHVQAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINEL 631
>gi|222618722|gb|EEE54854.1| hypothetical protein OsJ_02320 [Oryza sativa Japonica Group]
Length = 485
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 52 KKLERKAVTVRGSKSNRKKRTP-EVHKRYERKRRDKINKKMRALQELIPNCNKVDKASML 110
++L +KAV G+ NR + + H ER+R +K+N+ L+ L+P+ +KVDKAS L
Sbjct: 301 QRLLKKAVGGGGAWMNRAAGSSIKNHVMSERRRWEKLNEMFLTLKSLVPSIDKVDKASSL 360
Query: 111 EEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTG--IIGMQQMHAV 153
E I YLK L+ +V + G V P+ P IIG AV
Sbjct: 361 AETIAYLKELERRVQELESGKKVSRPAKRKPCSERIIGGGDAGAV 405
>gi|21536756|gb|AAM61088.1| unknown [Arabidopsis thaliana]
Length = 270
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 28/159 (17%)
Query: 7 IEPPVPSSSLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAV-TVRGSK 65
+EP VP+S G S+ +P+C + + + AC D+ K +K T G +
Sbjct: 81 LEPSVPTS-----GVSDLDPSCIKIDCRNSND-----ACTVDKSTKSSTKKRTGTGNGQE 130
Query: 66 SNRKKRTPEVHKRYERK--------RRDKINKKMRALQELIPNCNKVDKASMLEEAIDYL 117
S++ ++ + KR + K R++++ +++ ALQ+L+ K D AS+L EA+ Y+
Sbjct: 131 SDQNRKPGKKGKRNQDKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYI 190
Query: 118 KTLQFQVMMMSMGTGVCMPSMM---LPTGIIGMQQMHAV 153
K LQ Q+ ++ C P ++ L G++ M A+
Sbjct: 191 KFLQDQIQVL------CSPYLINHSLDGGVVTGDVMAAM 223
>gi|77556977|gb|ABA99773.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 266
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNC-NKVDKASMLEEAIDYLKTLQFQVMM 126
R + H E++RR KI ++ R LQ L+P C NK ++AS L++ I Y+K+LQ Q+
Sbjct: 79 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLEA 138
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMH 151
S G +++ P + MH
Sbjct: 139 TS-AVGSPAAAVLYPAAVHPQSYMH 162
>gi|326509515|dbj|BAJ91674.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527957|dbj|BAJ89030.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 684
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 51 EKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASML 110
E+K RK RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L
Sbjct: 486 EEKRPRK----RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLL 541
Query: 111 EEAIDYLKTLQ 121
+AI Y+ L+
Sbjct: 542 GDAISYINELR 552
>gi|2943789|dbj|BAA25078.1| RD22BP1 [Arabidopsis thaliana]
Length = 623
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 43/64 (67%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 439 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELK 498
Query: 122 FQVM 125
+V+
Sbjct: 499 SKVV 502
>gi|15219658|ref|NP_176820.1| transcription factor bHLH83 [Arabidopsis thaliana]
gi|75308842|sp|Q9C707.1|BH083_ARATH RecName: Full=Transcription factor bHLH83; AltName: Full=Basic
helix-loop-helix protein 83; Short=AtbHLH83; Short=bHLH
83; AltName: Full=Transcription factor EN 112; AltName:
Full=bHLH transcription factor bHLH083
gi|12322259|gb|AAG51154.1|AC074025_4 unknown protein [Arabidopsis thaliana]
gi|22135862|gb|AAM91513.1| unknown protein [Arabidopsis thaliana]
gi|30023790|gb|AAP13428.1| At1g66470 [Arabidopsis thaliana]
gi|332196391|gb|AEE34512.1| transcription factor bHLH83 [Arabidopsis thaliana]
Length = 298
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 38/48 (79%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+ RR++I+++++ LQEL+PN KVD +MLE+AI Y+K LQ QV +++
Sbjct: 211 KNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLA 258
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 68 RKKRTPEVHKRY--ERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQV 124
R KR H R ER RR +I+++MR LQEL+PN +K + + ML+ A+DY+K LQ QV
Sbjct: 220 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQV 279
Query: 125 MMMSMGTGVC 134
+S C
Sbjct: 280 KTLSDNRAKC 289
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 68 RKKRTPEVHKRY--ERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQV 124
R KR H R ER RR +I+ ++R LQEL+PN +K + A MLEEA+DY+K LQ Q+
Sbjct: 189 RAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVDYVKFLQRQI 248
Query: 125 MMMSMGTGVC 134
++ C
Sbjct: 249 QELTEQQRKC 258
>gi|242040107|ref|XP_002467448.1| hypothetical protein SORBIDRAFT_01g028230 [Sorghum bicolor]
gi|241921302|gb|EER94446.1| hypothetical protein SORBIDRAFT_01g028230 [Sorghum bicolor]
Length = 709
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 518 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELR 577
>gi|12643064|gb|AAK00453.1|AC060755_23 putative MYC transcription factor [Oryza sativa Japonica Group]
Length = 688
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 500 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELR 559
Query: 122 FQVMMM 127
++ +
Sbjct: 560 GKLTAL 565
>gi|224127674|ref|XP_002329336.1| predicted protein [Populus trichocarpa]
gi|222870790|gb|EEF07921.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 68 RKKR--TPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQV 124
R KR + H ER RR+KIN K+R LQ+L+P C++ + A MLEE I+Y+ +LQ QV
Sbjct: 149 RAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHRSMGMAVMLEEIINYVHSLQNQV 208
Query: 125 MMMSMGTGVCMPS 137
+SM S
Sbjct: 209 EFLSMELAAASSS 221
>gi|168025278|ref|XP_001765161.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683480|gb|EDQ69889.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 829
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 41/60 (68%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H + ER+RR+K+NK+ AL+ ++PN +K+DKAS+L +AI ++ LQ
Sbjct: 608 RGRKPANDREEPLNHVQAERQRREKLNKRFYALRAVVPNVSKMDKASLLGDAIAHINHLQ 667
>gi|326504380|dbj|BAJ91022.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 684
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 51 EKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASML 110
E+K RK RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L
Sbjct: 486 EEKRPRK----RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLL 541
Query: 111 EEAIDYLKTLQ 121
+AI Y+ L+
Sbjct: 542 GDAISYINELR 552
>gi|115483616|ref|NP_001065478.1| Os10g0575000 [Oryza sativa Japonica Group]
gi|45477841|gb|AAS66204.1| MYC protein [Oryza sativa]
gi|78709042|gb|ABB48017.1| transcription factor MYC7E, putative, expressed [Oryza sativa
Japonica Group]
gi|113640010|dbj|BAF27315.1| Os10g0575000 [Oryza sativa Japonica Group]
Length = 699
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 511 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELR 570
Query: 122 FQVMMM 127
++ +
Sbjct: 571 GKLTAL 576
>gi|356564005|ref|XP_003550247.1| PREDICTED: transcription factor BEE 1-like [Glycine max]
Length = 268
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR KIN+K+R LQ ++P C K + A ML+E I+Y+++LQ QV
Sbjct: 154 RRGQATDSHNLAERVRRGKINEKLRYLQNIVPGCYKTMSMAVMLDEIINYVQSLQHQVEF 213
Query: 127 MSM 129
+S+
Sbjct: 214 LSL 216
>gi|242049242|ref|XP_002462365.1| hypothetical protein SORBIDRAFT_02g024460 [Sorghum bicolor]
gi|241925742|gb|EER98886.1| hypothetical protein SORBIDRAFT_02g024460 [Sorghum bicolor]
Length = 353
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 76 HKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGT 131
H ER+RR +IN + L+ L+PN K DKAS+L E +D++K L+ Q M M T
Sbjct: 119 HSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVLDHVKELKRQTSAMMMAT 174
>gi|77556979|gb|ABA99775.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 387
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 8/93 (8%)
Query: 57 KAVTVRGSKSNRKKR-----TPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLE 111
K + RG +S++ R E+ ++ R RR KI ++ R LQ L+P C+K ++AS L+
Sbjct: 196 KQASPRGCRSSQPYRKSGDSIDELFTKFHR-RRFKITERFRTLQRLVPGCDKSNQASTLD 254
Query: 112 EAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGI 144
+ I Y+K+LQ Q+ MS+ P+++ P +
Sbjct: 255 QTIQYMKSLQHQLKAMSVVGSP--PALLYPAAV 285
>gi|223702430|gb|ACN21646.1| putative basic helix-loop-helix protein BHLH5 [Lotus japonicus]
gi|388495576|gb|AFK35854.1| unknown [Lotus japonicus]
Length = 268
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 51 EKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASM 109
E K + V VR R+ + + H ER RR KIN+K++ LQ ++P C K + A M
Sbjct: 142 EDKKSTQVVHVRA----RRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAIM 197
Query: 110 LEEAIDYLKTLQFQVMMMSM 129
L+E I+Y+++LQ QV +SM
Sbjct: 198 LDEIINYVQSLQHQVEFLSM 217
>gi|218193803|gb|EEC76230.1| hypothetical protein OsI_13645 [Oryza sativa Indica Group]
Length = 291
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Query: 34 KRRYEDTEGSACP-----CDQY-EKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKI 87
KR E + +C C Q +K++R A G R++ Y R+RR++I
Sbjct: 154 KRNQESMQSGSCSDNESNCSQVNRRKVDRVAGGGNGKVPARRRSATIAQSLYARRRRERI 213
Query: 88 NKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQV 124
N ++R LQ+L+PN KVD ++MLEEA+ Y+K LQ Q+
Sbjct: 214 NGRLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQI 250
>gi|195649667|gb|ACG44301.1| BHLH transcription factor [Zea mays]
Length = 136
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 32/39 (82%)
Query: 91 MRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
MRALQEL+PN NK D+A ML+E +DY+K L+ QV ++SM
Sbjct: 1 MRALQELVPNTNKTDRAVMLDEILDYVKFLRLQVKVLSM 39
>gi|18411462|ref|NP_567195.1| transcription factor bHLH14 [Arabidopsis thaliana]
gi|75277357|sp|O23090.1|BH014_ARATH RecName: Full=Transcription factor bHLH14; AltName: Full=Basic
helix-loop-helix protein 14; Short=AtbHLH14; Short=bHLH
14; AltName: Full=Transcription factor EN 33; AltName:
Full=bHLH transcription factor bHLH014
gi|2252855|gb|AAB62853.1| similar to the myc family of helix-loop-helix transcription factors
[Arabidopsis thaliana]
gi|7267426|emb|CAB80896.1| AT4g00870 [Arabidopsis thaliana]
gi|26185715|emb|CAD58596.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332656547|gb|AEE81947.1| transcription factor bHLH14 [Arabidopsis thaliana]
Length = 423
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 51 EKKLERKAVTVRGSKSNRKKRTPEV--HKRYERKRRDKINKKMRALQELIPNCNKVDKAS 108
E+K RK T R + + ++K P V H E++RR+K+N + AL+ ++P +++DKAS
Sbjct: 223 ERKRRRKLETTRVAAATKEKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKAS 282
Query: 109 MLEEAIDYLKTLQFQV 124
+L +A+ Y+++L+ ++
Sbjct: 283 LLSDAVSYIESLKSKI 298
>gi|17027282|gb|AAL34136.1|AC090713_23 putative transcription factor [Oryza sativa Japonica Group]
gi|108711234|gb|ABF99029.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|125588017|gb|EAZ28681.1| hypothetical protein OsJ_12693 [Oryza sativa Japonica Group]
Length = 310
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Query: 34 KRRYEDTEGSACP-----CDQY-EKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKI 87
KR E + +C C Q +K++R A G R++ Y R+RR++I
Sbjct: 173 KRNQESMQSGSCSDNESNCSQVNRRKVDRVAGGGNGKVPARRRSATIAQSLYARRRRERI 232
Query: 88 NKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQV 124
N ++R LQ+L+PN KVD ++MLEEA+ Y+K LQ Q+
Sbjct: 233 NGRLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQI 269
>gi|89027224|gb|ABD59338.1| G-box element binding protein [Pisum sativum]
Length = 646
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 456 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELK 515
Query: 122 FQV 124
++
Sbjct: 516 LKL 518
>gi|226425257|gb|ACO53628.1| bHLH domain protein [Gossypium hirsutum]
Length = 674
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N+K AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 486 RGRKPANGREEPLNHVEAERQRREKLNQKFYALRAVVPNVSKMDKASLLGDAISYINELK 545
>gi|225424017|ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Vitis vinifera]
Length = 258
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 56 RKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAI 114
R+ + VR ++ + + H ER RR+KIN+K+R LQ+L+P C K + A ML+ I
Sbjct: 135 REVIHVRA----KRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVII 190
Query: 115 DYLKTLQFQVMMMSM 129
+Y+++LQ Q+ +SM
Sbjct: 191 NYVQSLQNQIEFLSM 205
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQV 124
R+ + + H ER RR+KI+++M+ LQ+L+P C KV KA ML+E I+Y++ LQ QV
Sbjct: 9 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQFLQRQV 66
>gi|357117653|ref|XP_003560578.1| PREDICTED: transcription factor bHLH48-like [Brachypodium
distachyon]
Length = 259
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR+KIN +M L+EL+P C+KV A +L+E I+++++LQ QV
Sbjct: 83 RRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEY 142
Query: 127 MSMGTGVCMP 136
+SM P
Sbjct: 143 LSMRLAAVNP 152
>gi|222355764|gb|ACM48567.1| JAMYC [Taxus cuspidata]
Length = 660
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 44/64 (68%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N+++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 453 RGRKPANGREEPLNHVEAERQRREKLNQRVYALRAVVPNVSKMDKASLLGDAIAYINELR 512
Query: 122 FQVM 125
+V+
Sbjct: 513 SKVV 516
>gi|297737801|emb|CBI27002.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 56 RKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAI 114
R+ + VR ++ + + H ER RR+KIN+K+R LQ+L+P C K + A ML+ I
Sbjct: 118 REVIHVRA----KRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVII 173
Query: 115 DYLKTLQFQVMMMSM 129
+Y+++LQ Q+ +SM
Sbjct: 174 NYVQSLQNQIEFLSM 188
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR KIN++++ LQ+++P C K A+ML+E I+Y+++LQ QV
Sbjct: 150 RRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEF 209
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDG 169
+SM + ++ M + + MG G DG
Sbjct: 210 LSMKLTAASSYYDFNSETDAVESMQKAKAREA--VEMGQGRDG 250
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 68 RKKRTPEVHKRY--ERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQV 124
R KR H R ER RR KI+++MR LQ+L+PN +K + A ML+ A++Y+K LQ QV
Sbjct: 341 RAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQV 400
Query: 125 MMMSMGTGVC 134
+S C
Sbjct: 401 QTLSDNRAKC 410
>gi|356497663|ref|XP_003517679.1| PREDICTED: transcription factor MYC2-like [Glycine max]
Length = 648
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 452 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELK 511
Query: 122 FQVMMM 127
++ +
Sbjct: 512 SKLQTL 517
>gi|218187189|gb|EEC69616.1| hypothetical protein OsI_38990 [Oryza sativa Indica Group]
Length = 379
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNC-NKVDKASMLEEAIDYLKTLQFQVMM 126
R + H E++RR KI ++ R LQ L+P C NK ++AS L++ I Y+K+LQ Q+
Sbjct: 192 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLEA 251
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMH 151
S G +++ P + MH
Sbjct: 252 TS-AVGSPAAAVLYPAAVHPQSYMH 275
>gi|151383081|gb|ABS11038.1| MYC [Brassica oleracea var. gemmifera]
Length = 610
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 42/63 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 425 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELK 484
Query: 122 FQV 124
+V
Sbjct: 485 SKV 487
>gi|115470903|ref|NP_001059050.1| Os07g0182200 [Oryza sativa Japonica Group]
gi|113610586|dbj|BAF20964.1| Os07g0182200 [Oryza sativa Japonica Group]
gi|215694864|dbj|BAG90055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 136
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 33/39 (84%)
Query: 91 MRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
MRALQ+L+PN NK D+A+ML+E +DY+K L+ QV ++SM
Sbjct: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSM 39
>gi|414864593|tpg|DAA43150.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 290
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 61 VRGSKSNRKKRTPE-VHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKT 119
VRG+ N+ + V R+RR +I++K L LIP NK++ A MLEEA ++K
Sbjct: 143 VRGADGNKAGGACQSVQNSAARQRRKRISEKTAELARLIPGANKLNTAEMLEEASRHVKL 202
Query: 120 LQFQVMMMSM--GTGVCMPSMMLPTGIIGMQQMHAV 153
LQ QV M+++ G M P+ I ++MHA+
Sbjct: 203 LQAQVGMLALMRAAGSSEDDKM-PSAITAQERMHAL 237
>gi|296278608|gb|ADH04268.1| MYC1b transcription factor [Nicotiana tabacum]
gi|316930967|gb|ADU60100.1| MYC2a transcription factor [Nicotiana tabacum]
Length = 679
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 486 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELK 545
Query: 122 FQV 124
++
Sbjct: 546 LKL 548
>gi|296278606|gb|ADH04267.1| MYC1a transcription factor [Nicotiana tabacum]
gi|316930969|gb|ADU60101.1| MYC2b transcription factor [Nicotiana tabacum]
gi|316930971|gb|ADU60102.1| MYC2c transcription factor [Nicotiana tabacum]
Length = 681
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 488 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELK 547
Query: 122 FQV 124
++
Sbjct: 548 LKL 550
>gi|218185066|gb|EEC67493.1| hypothetical protein OsI_34761 [Oryza sativa Indica Group]
Length = 664
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 476 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELR 535
Query: 122 FQVMMM 127
++ +
Sbjct: 536 GKLTAL 541
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 68 RKKRTPEVHKRY--ERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQV 124
R KR H R ER RR KI+++MR LQ+L+PN +K + A ML+ A+DY+K LQ QV
Sbjct: 334 RAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQV 393
Query: 125 MMMSMGTGVC 134
+S C
Sbjct: 394 QTLSDCHAKC 403
>gi|52077404|dbj|BAD46515.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|125597317|gb|EAZ37097.1| hypothetical protein OsJ_21438 [Oryza sativa Japonica Group]
Length = 294
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 67 NRKKRT--PEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQV 124
++K+R E + RR++I++++RALQEL+P+ KVD +ML+ AI Y+K +Q Q+
Sbjct: 189 SKKQRANNKETQSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISYVKFMQMQL 248
Query: 125 MMM 127
++
Sbjct: 249 RVL 251
>gi|413955100|gb|AFW87749.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 703
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 510 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELR 569
>gi|147773703|emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]
Length = 237
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 56 RKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAI 114
R+ + VR ++ + + H ER RR+KIN+K+R LQ+L+P C K + A ML+ I
Sbjct: 114 REVIHVRA----KRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVII 169
Query: 115 DYLKTLQFQVMMMSM 129
+Y+++LQ Q+ +SM
Sbjct: 170 NYVQSLQNQIEFLSM 184
>gi|223702424|gb|ACN21643.1| putative basic helix-loop-helix protein BHLH6 [Lotus japonicus]
Length = 364
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 83 RRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMMMSM 129
RR+KI+++M+ LQ+L+P CNK + KA +L+E I+Y+++LQ QV +SM
Sbjct: 158 RREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSM 205
>gi|356495871|ref|XP_003516794.1| PREDICTED: transcription factor MYC2-like [Glycine max]
Length = 637
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 438 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELK 497
Query: 122 FQV 124
++
Sbjct: 498 LKL 500
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR KIN+++R LQ+++P C K + A ML+E I+Y+++LQ QV
Sbjct: 159 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEF 218
Query: 127 MSM 129
+SM
Sbjct: 219 LSM 221
>gi|116830915|gb|ABK28414.1| unknown [Arabidopsis thaliana]
Length = 224
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 11/106 (10%)
Query: 56 RKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAI 114
+ V VR ++ + + H ER RR+KIN++++ LQ+L+P C K + A ML+ I
Sbjct: 99 KDVVHVRA----KRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVII 154
Query: 115 DYLKTLQFQVMMMSM---GTGVCMPSMML---PTGIIGMQQMHAVA 154
DY+++LQ Q+ +SM C L PT I +H+ A
Sbjct: 155 DYVRSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQGGNIHSAA 200
>gi|449531709|ref|XP_004172828.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH13-like
[Cucumis sativus]
Length = 621
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 41/60 (68%)
Query: 70 KRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
+ P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ LQ +V +M
Sbjct: 445 REEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQEKVKVMEF 504
>gi|449432042|ref|XP_004133809.1| PREDICTED: transcription factor bHLH13-like [Cucumis sativus]
Length = 621
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 41/60 (68%)
Query: 70 KRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
+ P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ LQ +V +M
Sbjct: 445 REEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQEKVKVMEF 504
>gi|148906568|gb|ABR16436.1| unknown [Picea sitchensis]
Length = 590
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%)
Query: 70 KRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
+ P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y++ LQ +V M
Sbjct: 422 REEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAISYIQELQNKVKDM 479
>gi|125555439|gb|EAZ01045.1| hypothetical protein OsI_23077 [Oryza sativa Indica Group]
Length = 294
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 67 NRKKRT--PEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQV 124
++K+R E + RR++I++++RALQEL+P+ KVD +ML+ AI Y+K +Q Q+
Sbjct: 189 SKKQRANNKETQSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISYVKFMQMQL 248
Query: 125 MMM 127
++
Sbjct: 249 RVL 251
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKV-DKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR KIN++++ LQ+++P C K A+ML+E I+Y+++LQ QV
Sbjct: 139 RRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEF 198
Query: 127 MSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDG 169
+SM + ++ M + + MG G DG
Sbjct: 199 LSMKLTAASSYYDFNSETDAVESMQKAKAREA--VEMGQGRDG 239
>gi|13486646|dbj|BAB39884.1| unknown protein [Oryza sativa Japonica Group]
Length = 294
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 38/46 (82%)
Query: 83 RRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
RR++I+++++ LQ+L+PN KVD +MLE+AI+Y+K LQ QV +++
Sbjct: 216 RRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLA 261
>gi|115434094|ref|NP_001041805.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|113531336|dbj|BAF03719.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|215766224|dbj|BAG98452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388931|gb|ADX60270.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 295
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 38/46 (82%)
Query: 83 RRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
RR++I+++++ LQ+L+PN KVD +MLE+AI+Y+K LQ QV +++
Sbjct: 217 RRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLA 262
>gi|297810917|ref|XP_002873342.1| hypothetical protein ARALYDRAFT_908762 [Arabidopsis lyrata subsp.
lyrata]
gi|297319179|gb|EFH49601.1| hypothetical protein ARALYDRAFT_908762 [Arabidopsis lyrata subsp.
lyrata]
Length = 540
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 56 RKAVTVRGSKSNRKKRTPEV-HKRYERKRRDKINKKMRALQELIPNCN-KVDKASMLEEA 113
R VRGS +++K TP H E++RR KIN + + L++LIPN + K DKAS L E
Sbjct: 266 RVKADVRGSANDQKLNTPRSKHSATEQRRRSKINDRFQMLRQLIPNSDQKRDKASFLLEV 325
Query: 114 IDYLKTLQ 121
I+Y++ LQ
Sbjct: 326 IEYIQFLQ 333
>gi|18395643|ref|NP_564229.1| transcription factor bHLH75 [Arabidopsis thaliana]
gi|218563498|sp|A4D998.1|BH075_ARATH RecName: Full=Transcription factor bHLH75; AltName: Full=Basic
helix-loop-helix protein 75; Short=AtbHLH75; Short=bHLH
75; AltName: Full=Transcription factor EN 78; AltName:
Full=bHLH transcription factor bHLH075
gi|21618141|gb|AAM67191.1| helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
gi|51969656|dbj|BAD43520.1| putative bHLH transcription factor (bHLH075) [Arabidopsis thaliana]
gi|91805851|gb|ABE65654.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332192486|gb|AEE30607.1| transcription factor bHLH75 [Arabidopsis thaliana]
Length = 223
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 11/106 (10%)
Query: 56 RKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAI 114
+ V VR ++ + + H ER RR+KIN++++ LQ+L+P C K + A ML+ I
Sbjct: 99 KDVVHVRA----KRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVII 154
Query: 115 DYLKTLQFQVMMMSM---GTGVCMPSMML---PTGIIGMQQMHAVA 154
DY+++LQ Q+ +SM C L PT I +H+ A
Sbjct: 155 DYVRSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQGGNIHSAA 200
>gi|302398601|gb|ADL36595.1| BHLH domain class transcription factor [Malus x domestica]
Length = 691
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 499 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELK 558
Query: 122 FQV 124
++
Sbjct: 559 LKL 561
>gi|224077304|ref|XP_002305203.1| predicted protein [Populus trichocarpa]
gi|222848167|gb|EEE85714.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 39/48 (81%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+ RR++I+++++ LQ+L+PN +KVD +MLE+AI Y+K LQ QV +++
Sbjct: 247 KNRRERISERLKVLQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 294
>gi|222617607|gb|EEE53739.1| hypothetical protein OsJ_00092 [Oryza sativa Japonica Group]
Length = 310
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 38/46 (82%)
Query: 83 RRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
RR++I+++++ LQ+L+PN KVD +MLE+AI+Y+K LQ QV +++
Sbjct: 232 RRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLA 277
>gi|326500360|dbj|BAK06269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 558
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 60 TVRGS-KSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLK 118
T RGS K KR + ER+RR K+N ++ L+ L+PN K+D+AS+L +AIDY+
Sbjct: 276 TQRGSGKDGSGKRQQCKNLVAERRRRKKLNDRLYKLRSLVPNITKMDRASILGDAIDYIV 335
Query: 119 TLQFQV 124
LQ QV
Sbjct: 336 GLQKQV 341
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 65 KSNRKKRTPEVHKRY--ERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQ 121
K+ R R H R ER RR KI+++M+ LQEL+PN ++ + A ML++A++Y+K LQ
Sbjct: 377 KTLRANRGHATHPRSIAERVRRGKISERMKKLQELVPNSDRQTNTADMLDDAVEYVKQLQ 436
Query: 122 FQVMMMS 128
QV ++
Sbjct: 437 LQVQELT 443
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 68 RKKRTPEVHKRY--ERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQV 124
R KR H R ER RR +I++++R LQEL+PN +K + A ML+ A+DY+K LQ QV
Sbjct: 308 RAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQV 367
Query: 125 MMMSMGTGVC 134
+++ C
Sbjct: 368 KVINESRASC 377
>gi|168024073|ref|XP_001764561.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684139|gb|EDQ70543.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 62
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVD-KASMLEEAIDYLKTLQFQV 124
R+ + + H ER RR+KI+++M+ LQ+L+P C KV KA ML+E I+Y+++LQ QV
Sbjct: 4 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQV 61
>gi|222617455|gb|EEE53587.1| hypothetical protein OsJ_36829 [Oryza sativa Japonica Group]
Length = 271
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 94 LQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIG--MQQMH 151
L EL+ DKASML+EAI+YLK+LQ Q+ MM MG G+ P++M P + MQ+M
Sbjct: 146 LVELLWCNGHTDKASMLDEAIEYLKSLQLQLQMMWMGGGMAPPAVMFPAAGVHQYMQRMG 205
Query: 152 AV 153
AV
Sbjct: 206 AV 207
>gi|357517063|ref|XP_003628820.1| Transcription factor MYC2 [Medicago truncatula]
gi|355522842|gb|AET03296.1| Transcription factor MYC2 [Medicago truncatula]
Length = 648
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N+K AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 449 RGRKPANGREEPLNHVEAERQRREKLNQKFYALRAVVPNGSKMDKASLLGDAISYINELK 508
>gi|33339705|gb|AAQ14332.1|AF283507_1 MYC2 [Catharanthus roseus]
Length = 699
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 503 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELK 562
>gi|218187376|gb|EEC69803.1| hypothetical protein OsI_00101 [Oryza sativa Indica Group]
Length = 288
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 38/46 (82%)
Query: 83 RRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
RR++I+++++ LQ+L+PN KVD +MLE+AI+Y+K LQ QV +++
Sbjct: 210 RRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLA 255
>gi|388519201|gb|AFK47662.1| unknown [Lotus japonicus]
Length = 274
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQVMM 126
R+ + + H ER RR KIN+K+R LQ ++P C K + A ML+E I+Y+++LQ QV
Sbjct: 160 RRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEF 219
Query: 127 MSM 129
+S+
Sbjct: 220 LSL 222
>gi|356498752|ref|XP_003518213.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 78
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 91 MRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSMGTGVCMPSMMLPTGIIGMQQM 150
M+ALQEL+ N NK DKASML+E IDY++ LQ QV GT PS L + + +
Sbjct: 1 MKALQELVTNANKTDKASMLDEIIDYVRFLQLQV----KGT----PSSNLANHVDFAKVL 52
Query: 151 HAVAPQMSHFP 161
+ Q+S FP
Sbjct: 53 QPIQSQISEFP 63
>gi|449470312|ref|XP_004152861.1| PREDICTED: transcription factor bHLH14-like [Cucumis sativus]
gi|449477853|ref|XP_004155143.1| PREDICTED: transcription factor bHLH14-like [Cucumis sativus]
Length = 308
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 48/78 (61%)
Query: 50 YEKKLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASM 109
++ +L ++ T G + + P H ER+RR+K+N + +L+ ++PN +++DKAS+
Sbjct: 122 HDFELLKRIGTEFGFSLKKPENNPSTHVEAERQRREKLNDRFNSLRSVVPNVSRMDKASL 181
Query: 110 LEEAIDYLKTLQFQVMMM 127
L +A+ Y+ L+ ++ M
Sbjct: 182 LSDAVSYINELEMKISEM 199
>gi|224135857|ref|XP_002327321.1| predicted protein [Populus trichocarpa]
gi|222835691|gb|EEE74126.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 53 KLERKAVTVRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEE 112
++ERK V+ S + + H ERKRR +IN + L+ L+P +K+DKAS+L E
Sbjct: 58 RMERKGVSAEKSIAALRN-----HSEAERKRRARINAHLDTLRSLVPGTSKMDKASLLAE 112
Query: 113 AIDYLKTLQFQVMMMSMGTGVCMP 136
I +LK L+ Q G G+ MP
Sbjct: 113 VISHLKELKIQA--AGAGEGLLMP 134
>gi|224126263|ref|XP_002329512.1| predicted protein [Populus trichocarpa]
gi|222870221|gb|EEF07352.1| predicted protein [Populus trichocarpa]
Length = 630
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 441 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELK 500
Query: 122 FQV 124
++
Sbjct: 501 TKL 503
>gi|45421752|emb|CAF74711.1| MYC transcription factor [Solanum tuberosum]
Length = 646
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 42/63 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 460 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELK 519
Query: 122 FQV 124
+V
Sbjct: 520 SKV 522
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 37/47 (78%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R RR++I+++++ LQ LIPN +KVD +MLE+AI Y++ L+ Q+ M+
Sbjct: 770 RVRRERISERLKVLQALIPNGDKVDMVTMLEKAITYVQCLELQIKML 816
>gi|356531417|ref|XP_003534274.1| PREDICTED: transcription factor ATR2-like [Glycine max]
Length = 658
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 463 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELK 522
Query: 122 FQVMMM 127
++ +
Sbjct: 523 SKLQTL 528
>gi|255555757|ref|XP_002518914.1| DNA binding protein, putative [Ricinus communis]
gi|223541901|gb|EEF43447.1| DNA binding protein, putative [Ricinus communis]
Length = 479
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 43/63 (68%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + K P H ER+RR+++N + AL+ ++PN +K+DKAS+L +A+ Y++ L+
Sbjct: 292 RGRKPVKGKELPLNHVEAERQRRERLNNRFYALRSVVPNVSKMDKASLLADAVTYIQELK 351
Query: 122 FQV 124
+V
Sbjct: 352 AKV 354
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Query: 68 RKKRTPEVHKRY--ERKRRDKINKKMRALQELIPNCNK-VDKASMLEEAIDYLKTLQFQV 124
R KR H R ER RR KI+++MR LQ+L+PN +K + A ML+ A+DY+K LQ QV
Sbjct: 331 RAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQV 390
Query: 125 MMMS 128
+S
Sbjct: 391 QTLS 394
>gi|225427201|ref|XP_002280253.1| PREDICTED: transcription factor MYC2-like [Vitis vinifera]
Length = 663
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 468 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELR 527
>gi|125527433|gb|EAY75547.1| hypothetical protein OsI_03453 [Oryza sativa Indica Group]
Length = 394
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R RR++++ ++R LQ+L+P NK+D ASML+EA YLK L+ QV +
Sbjct: 292 RLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKL 338
>gi|115439485|ref|NP_001044022.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|19571105|dbj|BAB86530.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|20804650|dbj|BAB92339.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113533553|dbj|BAF05936.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|125571756|gb|EAZ13271.1| hypothetical protein OsJ_03197 [Oryza sativa Japonica Group]
gi|215741088|dbj|BAG97583.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 393
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R RR++++ ++R LQ+L+P NK+D ASML+EA YLK L+ QV +
Sbjct: 291 RLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKL 337
>gi|413950402|gb|AFW83051.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 430
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 35/44 (79%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQV 124
R+RR++I++++R LQ+L+P K+D ASML+EA YL+ LQ QV
Sbjct: 330 RQRRERISERLRVLQKLVPGGAKMDTASMLDEAASYLRFLQSQV 373
>gi|1142619|gb|AAB00686.1| phaseolin G-box binding protein PG1 [Phaseolus vulgaris]
Length = 642
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 449 RGRKPGNGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELK 508
>gi|79375674|ref|NP_176991.2| transcription factor bHLH109 [Arabidopsis thaliana]
gi|75287899|sp|Q5XVH0.1|BH109_ARATH RecName: Full=Transcription factor bHLH109; AltName: Full=Basic
helix-loop-helix protein 109; Short=AtbHLH109;
Short=bHLH 109; AltName: Full=bHLH transcription factor
bHLH109
gi|52354203|gb|AAU44422.1| hypothetical protein AT1G68240 [Arabidopsis thaliana]
gi|60547661|gb|AAX23794.1| hypothetical protein At1g68240 [Arabidopsis thaliana]
gi|332196649|gb|AEE34770.1| transcription factor bHLH109 [Arabidopsis thaliana]
Length = 185
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 14/117 (11%)
Query: 15 SLCSLGASNNNPACNTFNLKRRYEDTEGSACPCDQYEKKLERKAVTVRGSKSNRKKRTPE 74
S CS S NP F + + + + P ++ + +++R+ E
Sbjct: 24 SFCSENHSELNPLQEIFGVTKNNDHEKHDEEPDEE-------------SYRMAKRQRSME 70
Query: 75 VHKRYERKRRDKINKKMRALQELIPN-CNKVDKASMLEEAIDYLKTLQFQVMMMSMG 130
E+KRR +I K+ LQ L+PN C K D AS LE I+Y+K+L++QV +MSM
Sbjct: 71 YRMMMEKKRRKEIKDKVDILQGLMPNHCTKPDLASKLENIIEYIKSLKYQVDVMSMA 127
>gi|45421750|emb|CAF74710.1| MYC transcription factor [Solanum tuberosum]
Length = 692
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%)
Query: 62 RGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQ 121
RG K + P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ L+
Sbjct: 504 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELK 563
>gi|242058469|ref|XP_002458380.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
gi|241930355|gb|EES03500.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
Length = 406
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM-SMGT 131
R RR+++++++R LQ+L+P +K+D ASML+EA YLK L+ QV + ++GT
Sbjct: 302 RLRRERVSERLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQALETLGT 353
>gi|56783853|dbj|BAD81265.1| bHLH protein -like [Oryza sativa Japonica Group]
gi|125569662|gb|EAZ11177.1| hypothetical protein OsJ_01027 [Oryza sativa Japonica Group]
Length = 613
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 41/60 (68%)
Query: 70 KRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
+ P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ LQ ++ M +
Sbjct: 454 REEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQKKLKEMEV 513
>gi|449458442|ref|XP_004146956.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
gi|449503810|ref|XP_004162188.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 316
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
Query: 68 RKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMM 127
R+ + + H ER RR++I +++RALQEL+P+ NK D+A+ML+E +DY+K L+ QV ++
Sbjct: 157 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 216
Query: 128 SM----GTGVCMP 136
SM G G P
Sbjct: 217 SMSRLGGAGAVAP 229
>gi|225453146|ref|XP_002272414.1| PREDICTED: putative transcription factor bHLH086 [Vitis vinifera]
gi|296087164|emb|CBI33538.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 39/48 (81%)
Query: 81 RKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMS 128
+ RR++I+++++ LQ+L+PN +KVD +MLE+AI Y+K LQ QV +++
Sbjct: 263 KNRRERISERLKILQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 310
>gi|312283067|dbj|BAJ34399.1| unnamed protein product [Thellungiella halophila]
Length = 428
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 56 RKAVTVRGSKSNRKKRTPEV-HKRYERKRRDKINKKMRALQELIPNCN-KVDKASMLEEA 113
R VRGS +++K TP H E++RR KIN + + L++LIPN + K DKAS L E
Sbjct: 147 RVKADVRGSGNDQKLNTPRSKHSATEQRRRSKINDRFQMLRQLIPNSDQKRDKASFLLEV 206
Query: 114 IDYLKTLQ 121
I+Y++ LQ
Sbjct: 207 IEYIQFLQ 214
>gi|115435532|ref|NP_001042524.1| Os01g0235700 [Oryza sativa Japonica Group]
gi|113532055|dbj|BAF04438.1| Os01g0235700 [Oryza sativa Japonica Group]
gi|215694296|dbj|BAG89289.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768046|dbj|BAH00275.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 617
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 41/60 (68%)
Query: 70 KRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASMLEEAIDYLKTLQFQVMMMSM 129
+ P H ER+RR+K+N++ AL+ ++PN +K+DKAS+L +AI Y+ LQ ++ M +
Sbjct: 458 REEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQKKLKEMEV 517
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.131 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,394,998,005
Number of Sequences: 23463169
Number of extensions: 191514077
Number of successful extensions: 606463
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3017
Number of HSP's successfully gapped in prelim test: 2372
Number of HSP's that attempted gapping in prelim test: 601433
Number of HSP's gapped (non-prelim): 6046
length of query: 268
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 128
effective length of database: 9,074,351,707
effective search space: 1161517018496
effective search space used: 1161517018496
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)