BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038098
(580 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 144/297 (48%), Gaps = 17/297 (5%)
Query: 280 RRFTYLEIFQATNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFK-SFDIE 338
+RF+ E+ A++ FS N++GRGGFG VYK R+ DG VAVK + + + F E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLY---SSNYILDIFQRLNIM 395
+M + LV YM +GS+ CL S LD +R I
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 396 IDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTL 455
+ A L YLH IIH D+K +N+LLD+ A + DFG+AK + +D +
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VR 204
Query: 456 ATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFG---DMTLKHWVNDLL 512
TIG++APEY G+ S DV+ +G+ML+E T ++ D D+ L WV LL
Sbjct: 205 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 264
Query: 513 PISVME-IVDANLLSQ-KDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
+E +VD +L KDE V + +A+ CT SP +R E+V L
Sbjct: 265 KEKKLEALVDVDLQGNYKDEE-------VEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 142/297 (47%), Gaps = 17/297 (5%)
Query: 280 RRFTYLEIFQATNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFK-SFDIE 338
+RF+ E+ A++ F N++GRGGFG VYK R+ DG VAVK + + + F E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLY---SSNYILDIFQRLNIM 395
+M + LV YM +GS+ CL S LD +R I
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 396 IDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTL 455
+ A L YLH IIH D+K +N+LLD+ A + DFG+AK + +D +
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VR 196
Query: 456 ATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFG---DMTLKHWVNDLL 512
IG++APEY G+ S DV+ +G+ML+E T ++ D D+ L WV LL
Sbjct: 197 GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256
Query: 513 PISVME-IVDANLLSQ-KDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
+E +VD +L KDE V + +A+ CT SP +R E+V L
Sbjct: 257 KEKKLEALVDVDLQGNYKDEE-------VEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 151/303 (49%), Gaps = 17/303 (5%)
Query: 281 RFTYLEIFQATNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECD 340
R +++ +ATN F LIG G FG VYK ++DG +VA+K + + + F+ E +
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 341 MXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSN---YILDIFQRLNIMID 397
+ L+ +YM +G+L++ LY S+ + QRL I I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
A L YLH + IIH D+K N+LLD+N V ++DFG++K + DQ+ T
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 458 IGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMT-LKHWVNDLLPISV 516
+GY+ PEY +G+++ DVYSFG++L E + + +M L W +
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 517 ME-IVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL---LKIRD 572
+E IVD NL + + + + + A+KC S E R + +++ +L L++++
Sbjct: 265 LEQIVDPNLADK------IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318
Query: 573 SLL 575
S++
Sbjct: 319 SVI 321
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 150/303 (49%), Gaps = 17/303 (5%)
Query: 281 RFTYLEIFQATNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECD 340
R +++ +ATN F LIG G FG VYK ++DG +VA+K + + + F+ E +
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 341 MXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSN---YILDIFQRLNIMID 397
+ L+ +YM +G+L++ LY S+ + QRL I I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
A L YLH + IIH D+K N+LLD+N V ++DFG++K + Q+ T
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 458 IGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMT-LKHWVNDLLPISV 516
+GY+ PEY +G+++ DVYSFG++L E + + +M L W +
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 517 ME-IVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL---LKIRD 572
+E IVD NL + + + + + A+KC S E R + +++ +L L++++
Sbjct: 265 LEQIVDPNLADK------IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318
Query: 573 SLL 575
S++
Sbjct: 319 SVI 321
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 112/237 (47%), Gaps = 21/237 (8%)
Query: 275 RISNQR--RFTYLEIFQATNGFSEN------NLIGRGGFGSVYKARIQDGMEVAVK---- 322
+S+ R F++ E+ TN F E N +G GGFG VYK + + VAVK
Sbjct: 6 EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAA 64
Query: 323 VFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLE---KCL 379
+ D+ + FD E + D LV YMP+GSL CL
Sbjct: 65 MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 124
Query: 380 YSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMA 439
L R I A+ + +LH + IH D+K +N+LLD+ A +SDFG+A
Sbjct: 125 -DGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180
Query: 440 KPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDE 496
+ K Q++ ++ + T YMAPE R G+++ D+YSFG++L+E T DE
Sbjct: 181 RASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 236
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 107/228 (46%), Gaps = 19/228 (8%)
Query: 282 FTYLEIFQATNGFSEN------NLIGRGGFGSVYKARIQDGMEVAVK----VFDLQYGRA 331
F++ E+ TN F E N +G GGFG VYK + + VAVK + D+
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 73
Query: 332 FKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLE---KCLYSSNYILDI 388
+ FD E + D LV YMP+GSL CL L
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPPLSW 132
Query: 389 FQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS 448
R I A+ + +LH + IH D+K +N+LLD+ A +SDFG+A+ K Q+
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 449 LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDE 496
+ + + T YMAPE R G+++ D+YSFG++L+E T DE
Sbjct: 190 VMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 236
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 106/228 (46%), Gaps = 19/228 (8%)
Query: 282 FTYLEIFQATNGFSEN------NLIGRGGFGSVYKARIQDGMEVAVK----VFDLQYGRA 331
F++ E+ TN F E N +G GGFG VYK + + VAVK + D+
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 67
Query: 332 FKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLE---KCLYSSNYILDI 388
+ FD E + D LV YMP+GSL CL L
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPPLSW 126
Query: 389 FQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS 448
R I A+ + +LH + IH D+K +N+LLD+ A +SDFG+A+ K Q
Sbjct: 127 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 449 LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDE 496
+ + + T YMAPE R G+++ D+YSFG++L+E T DE
Sbjct: 184 VMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 230
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 105/228 (46%), Gaps = 19/228 (8%)
Query: 282 FTYLEIFQATNGFSEN------NLIGRGGFGSVYKARIQDGMEVAVK----VFDLQYGRA 331
F++ E+ TN F E N G GGFG VYK + + VAVK + D+
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 332 FKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLE---KCLYSSNYILDI 388
+ FD E + D LV Y P+GSL CL L
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCL-DGTPPLSW 123
Query: 389 FQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS 448
R I A+ + +LH + IH D+K +N+LLD+ A +SDFG+A+ K Q
Sbjct: 124 HXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 449 LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDE 496
+ ++ + T Y APE R G+++ D+YSFG++L+E T DE
Sbjct: 181 VXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 227
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 95/198 (47%), Gaps = 8/198 (4%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQ--YGRAFKSFDIECDMXXXXXXXXXXXXXXXX 357
IG G FG+V++A G +VAVK+ Q + F E +
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSSNY--ILDIFQRLNIMIDVASALEYLHFGYSVPIIH 415
++V EY+ GSL + L+ S LD +RL++ DVA + YLH + PI+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 416 CDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG 475
DLK N+L+D + DFG+++ LK L T +MAPE R+ +
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSR--LKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKS 220
Query: 476 DVYSFGIMLMETFTRKKP 493
DVYSFG++L E T ++P
Sbjct: 221 DVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 96/198 (48%), Gaps = 8/198 (4%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQ--YGRAFKSFDIECDMXXXXXXXXXXXXXXXX 357
IG G FG+V++A G +VAVK+ Q + F E +
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSSNYI--LDIFQRLNIMIDVASALEYLHFGYSVPIIH 415
++V EY+ GSL + L+ S LD +RL++ DVA + YLH + PI+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 416 CDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG 475
+LK N+L+D + DFG+++ LK L+ T +MAPE R+ +
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSR--LKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKS 220
Query: 476 DVYSFGIMLMETFTRKKP 493
DVYSFG++L E T ++P
Sbjct: 221 DVYSFGVILWELATLQQP 238
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 103/231 (44%), Gaps = 13/231 (5%)
Query: 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFG 61
NNL G IP A+ KL +L L + + G+IPD L ++ L LD N L G +P
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 62 NLTNLRNLYLGSNKLT-SIPSTLWNLKDILY-LDLSSNFL------LIGNLKVLVQVDLS 113
+L NL + N+++ +IP + + + + +S N L NL L VDLS
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLS 205
Query: 114 MNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDXXXXXXXXXXXXXXXGTIPISL 173
N G K+ Q + L N L + +G GT+P L
Sbjct: 206 RNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGL 264
Query: 174 EKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNELLCGMPNLQVPPC 224
+L L +NVSFN L GEIP G + F ++ N+ LCG P +P C
Sbjct: 265 TQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP---LPAC 312
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 61/141 (43%), Gaps = 19/141 (13%)
Query: 79 IPSTLWNLKDILYLDLSSNFLLIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEY 138
IPS+L NL YL NFL IG +NN IP I L L YL++ +
Sbjct: 68 IPSSLANLP---YL----NFLYIG----------GINNLVGPIPPAIAKLTQLHYLYITH 110
Query: 139 NRLQGSIPDSIGDXXXXXXXXXXXXXXXGTIPISLEKLLDLKDINVSFNKLEGEIPNK-G 197
+ G+IPD + GT+P S+ L +L I N++ G IP+ G
Sbjct: 111 TNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYG 170
Query: 198 PFRN-FSTESFEGNELLCGMP 217
F F++ + N L +P
Sbjct: 171 SFSKLFTSMTISRNRLTGKIP 191
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 63/147 (42%), Gaps = 20/147 (13%)
Query: 1 GNNLNGSIPIAVGKLQKL-QLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPAC 59
GN ++G+IP + G KL +++ N+L G IP L F +D N L+G
Sbjct: 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAF-VDLSRNMLEGDASVL 216
Query: 60 FGNLTNLRNLYLGSNKLTSIPSTLWNLKDILYLDLSSNFLLIGNLKVLVQVDLSMNNFSD 119
FG+ N + ++L N L DL +G K L +DL N
Sbjct: 217 FGSDKNTQKIHLAKNSLA--------------FDLGK----VGLSKNLNGLDLRNNRIYG 258
Query: 120 VIPTTIGGLKDLQYLFLEYNRLQGSIP 146
+P + LK L L + +N L G IP
Sbjct: 259 TLPQGLTQLKFLHSLNVSFNNLCGEIP 285
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 115/285 (40%), Gaps = 43/285 (15%)
Query: 300 IGRGGFGSVYKARI------QDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXX 353
+G G FG V+ A +D M VAVK A K F E ++
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 354 XXXXXXDDFKALVLEYMPHGSLEKCLYS---------------SNYILDIFQRLNIMIDV 398
D +V EYM HG L K L + + L + Q L+I +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
AS + YL S +H DL N L+ N++ + DFGM++ + D T+ I
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVME 518
+M PE + +T DV+SFG++L E FT K + W L V+E
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK------------QPWFQ-LSNTEVIE 246
Query: 519 IVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEI 563
+ + ++ C ++++ + C P+QR+N KEI
Sbjct: 247 CITQGRVLERPR------VCPKEVYDVMLGCWQREPQQRLNIKEI 285
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 299 LIGRGGFGSVYKARIQDGMEVAVKVF----DLQYGRAFKSFDIECDMXXXXXXXXXXXXX 354
+IG GGFG VY+A G EVAVK D + ++ E +
Sbjct: 14 IIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 355 XXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 414
+ LV+E+ G L + L DI +N + +A + YLH VPII
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQIARGMNYLHDEAIVPII 130
Query: 415 HCDLKPSNVLL--------DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYG 466
H DLK SN+L+ N + ++DFG+A +E T+ +MAPE
Sbjct: 131 HRDLKSSNILILQKVENGDLSNKILKITDFGLA----REWHRTTKMSAAGAYAWMAPEVI 186
Query: 467 REGQVSTNGDVYSFGIMLMETFTRKKP 493
R S DV+S+G++L E T + P
Sbjct: 187 RASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 104/254 (40%), Gaps = 36/254 (14%)
Query: 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPA--- 58
N L G IP +G+L+ L +L L +N G+IP +L +L LD N +G +PA
Sbjct: 497 NRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 556
Query: 59 ---------------------------CFGNLTNLRNLYLGSNKLTSIPS-TLWNLKDIL 90
C G L + S +L + + N+ +
Sbjct: 557 KQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRV 616
Query: 91 YLDLSSNFLLIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIG 150
Y +S N ++ +D+S N S IP IG + L L L +N + GSIPD +G
Sbjct: 617 YGGHTSP--TFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVG 674
Query: 151 DXXXXXXXXXXXXXXXGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGN 210
D G IP ++ L L +I++S N L G IP G F F F N
Sbjct: 675 DLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNN 734
Query: 211 ELLCGMPNLQVPPC 224
LCG P +P C
Sbjct: 735 PGLCGYP---LPRC 745
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 99/200 (49%), Gaps = 12/200 (6%)
Query: 9 PIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLA-ALFELDSGGNKLDGFVPACFGNLTNLR 67
PI L+ LQ LSL +N+ G IPD L L LD GN G VP FG+ + L
Sbjct: 259 PIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLE 318
Query: 68 NLYLGSNKLTS-IP-STLWNLKDILYLDLSSNFLL------IGNLKV-LVQVDLSMNNFS 118
+L L SN + +P TL ++ + LDLS N + NL L+ +DLS NNFS
Sbjct: 319 SLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFS 378
Query: 119 D-VIPTTIGGLKD-LQYLFLEYNRLQGSIPDSIGDXXXXXXXXXXXXXXXGTIPISLEKL 176
++P K+ LQ L+L+ N G IP ++ + GTIP SL L
Sbjct: 379 GPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL 438
Query: 177 LDLKDINVSFNKLEGEIPNK 196
L+D+ + N LEGEIP +
Sbjct: 439 SKLRDLKLWLNMLEGEIPQE 458
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 2 NNLNGSIPI-AVGKLQKLQLLSLEDNQLEGSIPDDLCRLAA-LFELDSGGNKLDG-FVPA 58
NN +G +P+ + K++ L++L L N+ G +P+ L L+A L LD N G +P
Sbjct: 325 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 384
Query: 59 CFGNLTN-LRNLYLGSNKLTS-IPSTLWNLKDILYLDLSSNFLL------IGNLKVLVQV 110
N N L+ LYL +N T IP TL N +++ L LS N+L +G+L L +
Sbjct: 385 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 444
Query: 111 DLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDXXXXXXXXXXXXXXXGTIP 170
L +N IP + +K L+ L L++N L G IP + + G IP
Sbjct: 445 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 504
Query: 171 ISLEKLLDLKDINVSFNKLEGEIP 194
+ +L +L + +S N G IP
Sbjct: 505 KWIGRLENLAILKLSNNSFSGNIP 528
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 75/149 (50%), Gaps = 19/149 (12%)
Query: 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFG 61
N L+G+IP ++G L KL+ L L N LEG IP +L + L L N L G +P+
Sbjct: 425 NYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLS 484
Query: 62 NLTNLRNLYLGSNKLTS-IPSTLWNLKDILYLDLSSNFLLIGNLKVLVQVDLSMNNFSDV 120
N TNL + L +N+LT IP W IG L+ L + LS N+FS
Sbjct: 485 NCTNLNWISLSNNRLTGEIPK--W----------------IGRLENLAILKLSNNSFSGN 526
Query: 121 IPTTIGGLKDLQYLFLEYNRLQGSIPDSI 149
IP +G + L +L L N G+IP ++
Sbjct: 527 IPAELGDCRSLIWLDLNTNLFNGTIPAAM 555
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 74/165 (44%), Gaps = 7/165 (4%)
Query: 18 LQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLT 77
LQ L L++N G IP L + L L N L G +P+ G+L+ LR+L L N L
Sbjct: 393 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 452
Query: 78 S-IPSTLWNLKDILYLDLSSNFLL------IGNLKVLVQVDLSMNNFSDVIPTTIGGLKD 130
IP L +K + L L N L + N L + LS N + IP IG L++
Sbjct: 453 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 512
Query: 131 LQYLFLEYNRLQGSIPDSIGDXXXXXXXXXXXXXXXGTIPISLEK 175
L L L N G+IP +GD GTIP ++ K
Sbjct: 513 LAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 557
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 81/196 (41%), Gaps = 24/196 (12%)
Query: 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACF 60
GN ++G + ++ + L+ L + N IP L +AL LD GNKL G
Sbjct: 184 GNKISGDVDVS--RCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAI 240
Query: 61 GNLTNLRNLYLGSNKLTSIPSTLWNLKDILYLDLSSNFLLIGNLKVLVQVDLSMNNFSDV 120
T L+ L + SN+ P LK + YL L+ N F+
Sbjct: 241 STCTELKLLNISSNQFVG-PIPPLPLKSLQYLSLAE------------------NKFTGE 281
Query: 121 IPTTIGGLKD-LQYLFLEYNRLQGSIPDSIGDXXXXXXXXXXXXXXXGTIPI-SLEKLLD 178
IP + G D L L L N G++P G G +P+ +L K+
Sbjct: 282 IPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRG 341
Query: 179 LKDINVSFNKLEGEIP 194
LK +++SFN+ GE+P
Sbjct: 342 LKVLDLSFNEFSGELP 357
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 104/254 (40%), Gaps = 36/254 (14%)
Query: 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPA--- 58
N L G IP +G+L+ L +L L +N G+IP +L +L LD N +G +PA
Sbjct: 500 NRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 559
Query: 59 ---------------------------CFGNLTNLRNLYLGSNKLTSIPS-TLWNLKDIL 90
C G L + S +L + + N+ +
Sbjct: 560 KQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRV 619
Query: 91 YLDLSSNFLLIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIG 150
Y +S N ++ +D+S N S IP IG + L L L +N + GSIPD +G
Sbjct: 620 YGGHTSP--TFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVG 677
Query: 151 DXXXXXXXXXXXXXXXGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGN 210
D G IP ++ L L +I++S N L G IP G F F F N
Sbjct: 678 DLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNN 737
Query: 211 ELLCGMPNLQVPPC 224
LCG P +P C
Sbjct: 738 PGLCGYP---LPRC 748
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 99/200 (49%), Gaps = 12/200 (6%)
Query: 9 PIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLA-ALFELDSGGNKLDGFVPACFGNLTNLR 67
PI L+ LQ LSL +N+ G IPD L L LD GN G VP FG+ + L
Sbjct: 262 PIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLE 321
Query: 68 NLYLGSNKLTS-IP-STLWNLKDILYLDLSSNFLL------IGNLKV-LVQVDLSMNNFS 118
+L L SN + +P TL ++ + LDLS N + NL L+ +DLS NNFS
Sbjct: 322 SLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFS 381
Query: 119 D-VIPTTIGGLKD-LQYLFLEYNRLQGSIPDSIGDXXXXXXXXXXXXXXXGTIPISLEKL 176
++P K+ LQ L+L+ N G IP ++ + GTIP SL L
Sbjct: 382 GPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL 441
Query: 177 LDLKDINVSFNKLEGEIPNK 196
L+D+ + N LEGEIP +
Sbjct: 442 SKLRDLKLWLNMLEGEIPQE 461
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 2 NNLNGSIPI-AVGKLQKLQLLSLEDNQLEGSIPDDLCRLAA-LFELDSGGNKLDG-FVPA 58
NN +G +P+ + K++ L++L L N+ G +P+ L L+A L LD N G +P
Sbjct: 328 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 387
Query: 59 CFGNLTN-LRNLYLGSNKLTS-IPSTLWNLKDILYLDLSSNFLL------IGNLKVLVQV 110
N N L+ LYL +N T IP TL N +++ L LS N+L +G+L L +
Sbjct: 388 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 447
Query: 111 DLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDXXXXXXXXXXXXXXXGTIP 170
L +N IP + +K L+ L L++N L G IP + + G IP
Sbjct: 448 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507
Query: 171 ISLEKLLDLKDINVSFNKLEGEIP 194
+ +L +L + +S N G IP
Sbjct: 508 KWIGRLENLAILKLSNNSFSGNIP 531
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 75/149 (50%), Gaps = 19/149 (12%)
Query: 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFG 61
N L+G+IP ++G L KL+ L L N LEG IP +L + L L N L G +P+
Sbjct: 428 NYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLS 487
Query: 62 NLTNLRNLYLGSNKLTS-IPSTLWNLKDILYLDLSSNFLLIGNLKVLVQVDLSMNNFSDV 120
N TNL + L +N+LT IP W IG L+ L + LS N+FS
Sbjct: 488 NCTNLNWISLSNNRLTGEIPK--W----------------IGRLENLAILKLSNNSFSGN 529
Query: 121 IPTTIGGLKDLQYLFLEYNRLQGSIPDSI 149
IP +G + L +L L N G+IP ++
Sbjct: 530 IPAELGDCRSLIWLDLNTNLFNGTIPAAM 558
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 74/165 (44%), Gaps = 7/165 (4%)
Query: 18 LQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLT 77
LQ L L++N G IP L + L L N L G +P+ G+L+ LR+L L N L
Sbjct: 396 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 455
Query: 78 S-IPSTLWNLKDILYLDLSSNFLL------IGNLKVLVQVDLSMNNFSDVIPTTIGGLKD 130
IP L +K + L L N L + N L + LS N + IP IG L++
Sbjct: 456 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 515
Query: 131 LQYLFLEYNRLQGSIPDSIGDXXXXXXXXXXXXXXXGTIPISLEK 175
L L L N G+IP +GD GTIP ++ K
Sbjct: 516 LAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 560
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 81/196 (41%), Gaps = 24/196 (12%)
Query: 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACF 60
GN ++G + ++ + L+ L + N IP L +AL LD GNKL G
Sbjct: 187 GNKISGDVDVS--RCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAI 243
Query: 61 GNLTNLRNLYLGSNKLTSIPSTLWNLKDILYLDLSSNFLLIGNLKVLVQVDLSMNNFSDV 120
T L+ L + SN+ P LK + YL L+ N F+
Sbjct: 244 STCTELKLLNISSNQFVG-PIPPLPLKSLQYLSLAE------------------NKFTGE 284
Query: 121 IPTTIGGLKD-LQYLFLEYNRLQGSIPDSIGDXXXXXXXXXXXXXXXGTIPI-SLEKLLD 178
IP + G D L L L N G++P G G +P+ +L K+
Sbjct: 285 IPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRG 344
Query: 179 LKDINVSFNKLEGEIP 194
LK +++SFN+ GE+P
Sbjct: 345 LKVLDLSFNEFSGELP 360
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 12/234 (5%)
Query: 269 NDANMPRISNQRRFTYLEIFQATNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDL-- 326
+ N R QR +Y +A+ IG G FG+VYK + +VAVK+ +
Sbjct: 14 QEKNKIRPRGQRDSSYYWEIEASEVMLSTR-IGSGSFGTVYKGKWHG--DVAVKILKVVD 70
Query: 327 QYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYIL 386
F++F E + D+ A+V ++ SL K L+
Sbjct: 71 PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNL-AIVTQWCEGSSLYKHLHVQETKF 129
Query: 387 DIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED 446
+FQ ++I A ++YLH + IIH D+K +N+ L + + + DFG+A +
Sbjct: 130 QMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186
Query: 447 QSLTQTQTLATIGYMAPEYGR---EGQVSTNGDVYSFGIMLMETFTRKKPTDEI 497
S Q ++ +MAPE R S DVYS+GI+L E T + P I
Sbjct: 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI 240
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 134/291 (46%), Gaps = 34/291 (11%)
Query: 295 SENNLIGRGGFGSVYKARIQDG---MEVAVKVFDLQYGRAFKS-FDIECDMXXXXXXXXX 350
+ +IG G FG VYK ++ EV V + L+ G K D +
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 351 XXXXXXXXXDDFKALVL--EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFG 408
+K +++ EYM +G+L+K L + + Q + ++ +A+ ++YL
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA-- 164
Query: 409 YSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG--YMAPEYG 466
++ +H DL N+L++ N+V +SDFG+++ +L++D T T + I + APE
Sbjct: 165 -NMNYVHRDLAARNILVNSNLVCKVSDFGLSR-VLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 467 REGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLS 526
+ ++ DV+SFGI++ E T +G+ +W +L VM+ ++
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMT---------YGER--PYW--ELSNHEVMKAINDGF-- 267
Query: 527 QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVT---RLLKIRDSL 574
T C S I+ L M+C + +R +IV+ +L++ DSL
Sbjct: 268 ----RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSL 314
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 110/286 (38%), Gaps = 40/286 (13%)
Query: 300 IGRGGFGSVYKARI------QDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXX 353
+G G FG V+ A QD + VAVK A K F E ++
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 354 XXXXXXDDFKALVLEYMPHGSLEKCLYSSN------------YILDIFQRLNIMIDVASA 401
D +V EYM HG L K L + L Q L+I +A+
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
+ YL S +H DL N L+ +N++ + DFGM++ + D T+ I +M
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 462 APEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVD 521
PE + +T DV+S G++L E FT +G N+ V+E +
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFT---------YGKQPWYQLSNN----EVIECIT 244
Query: 522 ANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
+ Q+ C ++ L + C P R N K I T L
Sbjct: 245 QGRVLQRPR------TCPQEVYELMLGCWQREPHMRKNIKGIHTLL 284
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 114/291 (39%), Gaps = 48/291 (16%)
Query: 300 IGRGGFGSVYKARI------QDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXX 353
+G G FG V+ A QD M VAVK A + F E ++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 354 XXXXXXDDFKALVLEYMPHGSLEKCLYS--------------SNYILDIFQRLNIMIDVA 399
+V EYM HG L + L S + L + Q L + VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 400 SALEYL---HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
+ + YL HF +H DL N L+ +V + DFGM++ + D +T+
Sbjct: 169 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISV 516
I +M PE + +T DV+SFG++L E FT K + W +S
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK------------QPWYQ----LSN 266
Query: 517 MEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
E +D ++Q E C ++ + C P+QR + K++ RL
Sbjct: 267 TEAIDC--ITQGRE-LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 314
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 114/291 (39%), Gaps = 48/291 (16%)
Query: 300 IGRGGFGSVYKARI------QDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXX 353
+G G FG V+ A QD M VAVK A + F E ++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 354 XXXXXXDDFKALVLEYMPHGSLEKCLYS--------------SNYILDIFQRLNIMIDVA 399
+V EYM HG L + L S + L + Q L + VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 400 SALEYL---HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
+ + YL HF +H DL N L+ +V + DFGM++ + D +T+
Sbjct: 140 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISV 516
I +M PE + +T DV+SFG++L E FT K + W +S
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK------------QPWYQ----LSN 237
Query: 517 MEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
E +D ++Q E C ++ + C P+QR + K++ RL
Sbjct: 238 TEAIDC--ITQGRE-LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 285
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 114/291 (39%), Gaps = 48/291 (16%)
Query: 300 IGRGGFGSVYKARI------QDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXX 353
+G G FG V+ A QD M VAVK A + F E ++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 354 XXXXXXDDFKALVLEYMPHGSLEKCLYS--------------SNYILDIFQRLNIMIDVA 399
+V EYM HG L + L S + L + Q L + VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 400 SALEYL---HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
+ + YL HF +H DL N L+ +V + DFGM++ + D +T+
Sbjct: 146 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISV 516
I +M PE + +T DV+SFG++L E FT K + W +S
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK------------QPWYQ----LSN 243
Query: 517 MEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
E +D ++Q E C ++ + C P+QR + K++ RL
Sbjct: 244 TEAIDC--ITQGRE-LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 291
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 139/314 (44%), Gaps = 39/314 (12%)
Query: 273 MPRISNQRRFTYLEIFQATNGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFDLQY 328
+PR S Q + + ATN S + ++G G FG V R++ + VA+K + Y
Sbjct: 15 VPRGSTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY 73
Query: 329 G-RAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILD 387
+ + F E + +V EYM +GSL+ L +
Sbjct: 74 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 133
Query: 388 IFQRLNIMIDVASALEYLH-FGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED 446
+ Q + ++ +AS ++YL GY +H DL N+L++ N+V +SDFG+++ L +
Sbjct: 134 VIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 189
Query: 447 QSLTQTQ-TLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
++ T+ I + +PE + ++ DV+S+GI+L E + +G+
Sbjct: 190 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS---------YGER--P 238
Query: 506 HWVNDLLPISVMEIVDANLLSQKDEHFTTKG--QCVSFIFNLAMKCTVESPEQRINAKEI 563
+W E+ + +++ DE + C + ++ L + C + R ++I
Sbjct: 239 YW----------EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQI 288
Query: 564 VTRLLKIRDSLLKN 577
V+ I D L++N
Sbjct: 289 VS----ILDKLIRN 298
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 91/204 (44%), Gaps = 13/204 (6%)
Query: 297 NNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXX 356
++GRG FG V KA+ + +VA+K + + R K+F +E +
Sbjct: 14 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVE--LRQLSRVNHPNIVKLY 68
Query: 357 XXXDDFKALVLEYMPHGSLEKCLYSSNYI--LDIFQRLNIMIDVASALEYLHFGYSVPII 414
+ LV+EY GSL L+ + + ++ + + + YLH +I
Sbjct: 69 GACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 415 HCDLKPSNVLL-DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVST 473
H DLKP N+LL V + DFG A D T + +MAPE S
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGSNYSE 183
Query: 474 NGDVYSFGIMLMETFTRKKPTDEI 497
DV+S+GI+L E TR+KP DEI
Sbjct: 184 KCDVFSWGIILWEVITRRKPFDEI 207
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 91/204 (44%), Gaps = 13/204 (6%)
Query: 297 NNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXX 356
++GRG FG V KA+ + +VA+K + + R K+F +E +
Sbjct: 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVE--LRQLSRVNHPNIVKLY 67
Query: 357 XXXDDFKALVLEYMPHGSLEKCLYSSNYI--LDIFQRLNIMIDVASALEYLHFGYSVPII 414
+ LV+EY GSL L+ + + ++ + + + YLH +I
Sbjct: 68 GACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 415 HCDLKPSNVLL-DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVST 473
H DLKP N+LL V + DFG A D T + +MAPE S
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGSNYSE 182
Query: 474 NGDVYSFGIMLMETFTRKKPTDEI 497
DV+S+GI+L E TR+KP DEI
Sbjct: 183 KCDVFSWGIILWEVITRRKPFDEI 206
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 133/306 (43%), Gaps = 32/306 (10%)
Query: 294 FSENNL-----IGRGGFGSVYKAR---IQD--GMEVAVKVFDLQYGRAFKSFDIECDMXX 343
F E +L +G+G FGSV R +QD G VAVK + F+ E ++
Sbjct: 11 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 70
Query: 344 XXXXXXXXXXXXXXXXDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 401
+ L++EY+P+GSL L +D + L +
Sbjct: 71 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 130
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 459
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 131 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 186
Query: 460 YMAPEYGREGQVSTNGDVYSFGIMLMETFT----RKKPTDEIFFGDMTLKHWVNDLLPIS 515
+ APE E + S DV+SFG++L E FT K P E F M ++
Sbjct: 187 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE--FMRMIGNDKQGQMIVFH 244
Query: 516 VMEIVDAN-LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574
++E++ N L + D C I+ + +C + QR + +++ R+ +IRD++
Sbjct: 245 LIELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 297
Query: 575 LKNVKR 580
V R
Sbjct: 298 AGLVPR 303
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 131/300 (43%), Gaps = 32/300 (10%)
Query: 294 FSENNL-----IGRGGFGSVYKAR---IQD--GMEVAVKVFDLQYGRAFKSFDIECDMXX 343
F E +L +G+G FGSV R +QD G VAVK + F+ E ++
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 344 XXXXXXXXXXXXXXXXDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 401
+ L++EY+P+GSL L +D + L +
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 459
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 145 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 200
Query: 460 YMAPEYGREGQVSTNGDVYSFGIMLMETFT----RKKPTDEIFFGDMTLKHWVNDLLPIS 515
+ APE E + S DV+SFG++L E FT K P E F M ++
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE--FMRMIGNDKQGQMIVFH 258
Query: 516 VMEIVDAN-LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574
++E++ N L + D C I+ + +C + QR + +++ R+ +IRD++
Sbjct: 259 LIELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 131/300 (43%), Gaps = 32/300 (10%)
Query: 294 FSENNL-----IGRGGFGSVYKAR---IQD--GMEVAVKVFDLQYGRAFKSFDIECDMXX 343
F E +L +G+G FGSV R +QD G VAVK + F+ E ++
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 344 XXXXXXXXXXXXXXXXDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 401
+ L++EY+P+GSL L +D + L +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 459
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 127 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 182
Query: 460 YMAPEYGREGQVSTNGDVYSFGIMLMETFT----RKKPTDEIFFGDMTLKHWVNDLLPIS 515
+ APE E + S DV+SFG++L E FT K P E F M ++
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE--FMRMIGNDKQGQMIVFH 240
Query: 516 VMEIVDAN-LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574
++E++ N L + D C I+ + +C + QR + +++ R+ +IRD++
Sbjct: 241 LIELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 131/300 (43%), Gaps = 32/300 (10%)
Query: 294 FSENNL-----IGRGGFGSVYKAR---IQD--GMEVAVKVFDLQYGRAFKSFDIECDMXX 343
F E +L +G+G FGSV R +QD G VAVK + F+ E ++
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 344 XXXXXXXXXXXXXXXXDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 401
+ L++EY+P+GSL L +D + L +
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 459
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 145 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 200
Query: 460 YMAPEYGREGQVSTNGDVYSFGIMLMETFT----RKKPTDEIFFGDMTLKHWVNDLLPIS 515
+ APE E + S DV+SFG++L E FT K P E F M ++
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE--FMRMIGNDKQGQMIVFH 258
Query: 516 VMEIVDAN-LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574
++E++ N L + D C I+ + +C + QR + +++ R+ +IRD++
Sbjct: 259 LIELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 131/300 (43%), Gaps = 32/300 (10%)
Query: 294 FSENNL-----IGRGGFGSVYKAR---IQD--GMEVAVKVFDLQYGRAFKSFDIECDMXX 343
F E +L +G+G FGSV R +QD G VAVK + F+ E ++
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 344 XXXXXXXXXXXXXXXXDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 401
+ L++EY+P+GSL L +D + L +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 459
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 127 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEFFKVKEPGESPIF 182
Query: 460 YMAPEYGREGQVSTNGDVYSFGIMLMETFT----RKKPTDEIFFGDMTLKHWVNDLLPIS 515
+ APE E + S DV+SFG++L E FT K P E F M ++
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE--FMRMIGNDKQGQMIVFH 240
Query: 516 VMEIVDAN-LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574
++E++ N L + D C I+ + +C + QR + +++ R+ +IRD++
Sbjct: 241 LIELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
LV E+M HG L L + + L + +DV + YL +IH DL N
Sbjct: 78 CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLAARNC 134
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N V +SDFGM + +L +DQ + T T + + +PE + S+ DV+SFG++
Sbjct: 135 LVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 193
Query: 484 LMETFTRKK 492
+ E F+ K
Sbjct: 194 MWEVFSEGK 202
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 131/300 (43%), Gaps = 32/300 (10%)
Query: 294 FSENNL-----IGRGGFGSVYKAR---IQD--GMEVAVKVFDLQYGRAFKSFDIECDMXX 343
F E +L +G+G FGSV R +QD G VAVK + F+ E ++
Sbjct: 12 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 71
Query: 344 XXXXXXXXXXXXXXXXDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 401
+ L++EY+P+GSL L +D + L +
Sbjct: 72 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 131
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 459
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 132 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 187
Query: 460 YMAPEYGREGQVSTNGDVYSFGIMLMETFT----RKKPTDEIFFGDMTLKHWVNDLLPIS 515
+ APE E + S DV+SFG++L E FT K P E F M ++
Sbjct: 188 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE--FMRMIGNDKQGQMIVFH 245
Query: 516 VMEIVDAN-LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574
++E++ N L + D C I+ + +C + QR + +++ R+ +IRD++
Sbjct: 246 LIELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 298
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 131/300 (43%), Gaps = 32/300 (10%)
Query: 294 FSENNL-----IGRGGFGSVYKAR---IQD--GMEVAVKVFDLQYGRAFKSFDIECDMXX 343
F E +L +G+G FGSV R +QD G VAVK + F+ E ++
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 344 XXXXXXXXXXXXXXXXDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 401
+ L++EY+P+GSL L +D + L +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 459
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 127 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 182
Query: 460 YMAPEYGREGQVSTNGDVYSFGIMLMETFT----RKKPTDEIFFGDMTLKHWVNDLLPIS 515
+ APE E + S DV+SFG++L E FT K P E F M ++
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE--FMRMIGNDKQGQMIVFH 240
Query: 516 VMEIVDAN-LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574
++E++ N L + D C I+ + +C + QR + +++ R+ +IRD++
Sbjct: 241 LIELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 131/300 (43%), Gaps = 32/300 (10%)
Query: 294 FSENNL-----IGRGGFGSVYKAR---IQD--GMEVAVKVFDLQYGRAFKSFDIECDMXX 343
F E +L +G+G FGSV R +QD G VAVK + F+ E ++
Sbjct: 10 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 344 XXXXXXXXXXXXXXXXDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 401
+ L++EY+P+GSL L +D + L +
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 129
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 459
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 130 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 185
Query: 460 YMAPEYGREGQVSTNGDVYSFGIMLMETFT----RKKPTDEIFFGDMTLKHWVNDLLPIS 515
+ APE E + S DV+SFG++L E FT K P E F M ++
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE--FMRMIGNDKQGQMIVFH 243
Query: 516 VMEIVDAN-LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574
++E++ N L + D C I+ + +C + QR + +++ R+ +IRD++
Sbjct: 244 LIELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 131/300 (43%), Gaps = 32/300 (10%)
Query: 294 FSENNL-----IGRGGFGSVYKAR---IQD--GMEVAVKVFDLQYGRAFKSFDIECDMXX 343
F E +L +G+G FGSV R +QD G VAVK + F+ E ++
Sbjct: 14 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 73
Query: 344 XXXXXXXXXXXXXXXXDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 401
+ L++EY+P+GSL L +D + L +
Sbjct: 74 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 133
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 459
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 134 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 189
Query: 460 YMAPEYGREGQVSTNGDVYSFGIMLMETFT----RKKPTDEIFFGDMTLKHWVNDLLPIS 515
+ APE E + S DV+SFG++L E FT K P E F M ++
Sbjct: 190 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE--FMRMIGNDKQGQMIVFH 247
Query: 516 VMEIVDAN-LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574
++E++ N L + D C I+ + +C + QR + +++ R+ +IRD++
Sbjct: 248 LIELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 300
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 131/300 (43%), Gaps = 32/300 (10%)
Query: 294 FSENNL-----IGRGGFGSVYKAR---IQD--GMEVAVKVFDLQYGRAFKSFDIECDMXX 343
F E +L +G+G FGSV R +QD G VAVK + F+ E ++
Sbjct: 6 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 65
Query: 344 XXXXXXXXXXXXXXXXDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 401
+ L++EY+P+GSL L +D + L +
Sbjct: 66 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 125
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 459
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 126 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 181
Query: 460 YMAPEYGREGQVSTNGDVYSFGIMLMETFT----RKKPTDEIFFGDMTLKHWVNDLLPIS 515
+ APE E + S DV+SFG++L E FT K P E F M ++
Sbjct: 182 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE--FMRMIGNDKQGQMIVFH 239
Query: 516 VMEIVDAN-LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574
++E++ N L + D C I+ + +C + QR + +++ R+ +IRD++
Sbjct: 240 LIELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 292
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 131/300 (43%), Gaps = 32/300 (10%)
Query: 294 FSENNL-----IGRGGFGSVYKAR---IQD--GMEVAVKVFDLQYGRAFKSFDIECDMXX 343
F E +L +G+G FGSV R +QD G VAVK + F+ E ++
Sbjct: 13 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 72
Query: 344 XXXXXXXXXXXXXXXXDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 401
+ L++EY+P+GSL L +D + L +
Sbjct: 73 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 132
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 459
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 133 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 188
Query: 460 YMAPEYGREGQVSTNGDVYSFGIMLMETFT----RKKPTDEIFFGDMTLKHWVNDLLPIS 515
+ APE E + S DV+SFG++L E FT K P E F M ++
Sbjct: 189 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE--FMRMIGNDKQGQMIVFH 246
Query: 516 VMEIVDAN-LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574
++E++ N L + D C I+ + +C + QR + +++ R+ +IRD++
Sbjct: 247 LIELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 299
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 132/300 (44%), Gaps = 32/300 (10%)
Query: 294 FSENNL-----IGRGGFGSVYKAR---IQD--GMEVAVKVFDLQYGRAFKSFDIECDMXX 343
F E +L +G+G FGSV R +QD G VAVK + F+ E ++
Sbjct: 10 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 344 XXXXXXXXXXXXXXXXDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 401
+ L++EY+P+GSL L + +D + L +
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKG 129
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 459
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 130 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 185
Query: 460 YMAPEYGREGQVSTNGDVYSFGIMLMETFT----RKKPTDEIFFGDMTLKHWVNDLLPIS 515
+ APE E + S DV+SFG++L E FT K P E F M ++
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE--FMRMIGNDKQGQMIVFH 243
Query: 516 VMEIVDAN-LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574
++E++ N L + D C I+ + +C + QR + +++ R+ +IRD++
Sbjct: 244 LIELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 130/300 (43%), Gaps = 32/300 (10%)
Query: 294 FSENNL-----IGRGGFGSVYKAR---IQD--GMEVAVKVFDLQYGRAFKSFDIECDMXX 343
F E +L +G+G FGSV R +QD G VAVK + F+ E ++
Sbjct: 5 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 64
Query: 344 XXXXXXXXXXXXXXXXDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 401
+ L++EY+P+GSL L +D + L +
Sbjct: 65 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 124
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 459
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 125 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 180
Query: 460 YMAPEYGREGQVSTNGDVYSFGIMLMETFT----RKKPTDEIFFGDMTLKHWVNDLLPIS 515
+ APE E + S DV+SFG++L E FT K P E F M ++
Sbjct: 181 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE--FMRMIGNDKQGQMIVFH 238
Query: 516 VMEIVDAN-LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574
++E++ N L + D C I+ + +C + QR + +++ R+ +IRD +
Sbjct: 239 LIELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 291
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
LV E+M HG L L + + L + +DV + YL +IH DL N
Sbjct: 81 CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNC 137
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N V +SDFGM + +L +DQ + T T + + +PE + S+ DV+SFG++
Sbjct: 138 LVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 196
Query: 484 LMETFTRKK 492
+ E F+ K
Sbjct: 197 MWEVFSEGK 205
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
LV E+M HG L L + + L + +DV + YL +IH DL N
Sbjct: 78 CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNC 134
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N V +SDFGM + +L +DQ + T T + + +PE + S+ DV+SFG++
Sbjct: 135 LVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 193
Query: 484 LMETFTRKK 492
+ E F+ K
Sbjct: 194 MWEVFSEGK 202
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
LV E+M HG L L + + L + +DV + YL +IH DL N
Sbjct: 76 CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNC 132
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N V +SDFGM + +L +DQ + T T + + +PE + S+ DV+SFG++
Sbjct: 133 LVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 191
Query: 484 LMETFTRKK 492
+ E F+ K
Sbjct: 192 MWEVFSEGK 200
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 130/300 (43%), Gaps = 32/300 (10%)
Query: 294 FSENNL-----IGRGGFGSVYKAR---IQD--GMEVAVKVFDLQYGRAFKSFDIECDMXX 343
F E +L +G+G FGSV R +QD G VAVK + F+ E ++
Sbjct: 38 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 97
Query: 344 XXXXXXXXXXXXXXXXDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 401
+ L++EY+P+GSL L +D + L +
Sbjct: 98 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 157
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 459
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 158 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 213
Query: 460 YMAPEYGREGQVSTNGDVYSFGIMLMETFT----RKKPTDEIFFGDMTLKHWVNDLLPIS 515
+ APE E + S DV+SFG++L E FT K P E F M ++
Sbjct: 214 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE--FMRMIGNDKQGQMIVFH 271
Query: 516 VMEIVDAN-LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574
++E++ N L + D C I+ + +C + QR + +++ R+ +IRD +
Sbjct: 272 LIELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
LV E+M HG L L + + L + +DV + YL +IH DL N
Sbjct: 98 CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNC 154
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N V +SDFGM + +L +DQ + T T + + +PE + S+ DV+SFG++
Sbjct: 155 LVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 213
Query: 484 LMETFTRKK 492
+ E F+ K
Sbjct: 214 MWEVFSEGK 222
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 132/300 (44%), Gaps = 32/300 (10%)
Query: 294 FSENNL-----IGRGGFGSVYKAR---IQD--GMEVAVKVFDLQYGRAFKSFDIECDMXX 343
F E +L +G+G FGSV R +QD G VAVK + F+ E ++
Sbjct: 10 FEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 344 XXXXXXXXXXXXXXXXDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 401
+ L++E++P+GSL + L +D + L +
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKG 129
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 459
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 130 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 185
Query: 460 YMAPEYGREGQVSTNGDVYSFGIMLMETFT----RKKPTDEIFFGDMTLKHWVNDLLPIS 515
+ APE E + S DV+SFG++L E FT K P E F M ++
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE--FMRMIGNDKQGQMIVFH 243
Query: 516 VMEIVDAN-LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574
++E++ N L + D C I+ + +C + QR + +++ R+ +IRD++
Sbjct: 244 LIELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
LV E+M HG L L + + L + +DV + YL +IH DL N
Sbjct: 79 CLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNC 135
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N V +SDFGM + +L +DQ + T T + + +PE + S+ DV+SFG++
Sbjct: 136 LVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 194
Query: 484 LMETFTRKK 492
+ E F+ K
Sbjct: 195 MWEVFSEGK 203
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 111/287 (38%), Gaps = 30/287 (10%)
Query: 297 NNLIGRGGFGSVYKARI--QDGMEVAVKVFDLQ----YGRAFKSFDIECDMXXXXXXXXX 350
N +IGRG FG VY + DG ++ V L G + M
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
+ +VL YM HG L + + + + + + VA ++YL S
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 150
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMAPEYGRE 468
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQT 210
Query: 469 GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQK 528
+ +T DV+SFG++L E TR P P + D + +
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 251
Query: 529 DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575
C ++ + +KC E R + E+V+R+ I + +
Sbjct: 252 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 298
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 102/231 (44%), Gaps = 21/231 (9%)
Query: 299 LIGRGGFGSVYKAR-IQDGMEVAVKVF--DLQ-----YGRAFKSFDIECDMXXXXXXXXX 350
++G GG V+ AR ++D +VAVKV DL Y R + +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
+V+EY+ +L +++ + + I + +A A + L+F +
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADACQALNFSHQ 134
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT-LATIGYMAPEYGREG 469
IIH D+KP+N+++ + DFG+A+ + S+TQT + T Y++PE R
Sbjct: 135 NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 470 QVSTNGDVYSFGIMLMETFTRKKPTDEIFFGD----MTLKHWVNDLLPISV 516
V DVYS G +L E T + P F GD + +H D +P S
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPIPPSA 241
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 102/231 (44%), Gaps = 21/231 (9%)
Query: 299 LIGRGGFGSVYKAR-IQDGMEVAVKVF--DLQ-----YGRAFKSFDIECDMXXXXXXXXX 350
++G GG V+ AR ++D +VAVKV DL Y R + +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
+V+EY+ +L +++ + + I + +A A + L+F +
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADACQALNFSHQ 134
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT-LATIGYMAPEYGREG 469
IIH D+KP+N+++ + DFG+A+ + S+TQT + T Y++PE R
Sbjct: 135 NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 470 QVSTNGDVYSFGIMLMETFTRKKPTDEIFFGD----MTLKHWVNDLLPISV 516
V DVYS G +L E T + P F GD + +H D +P S
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPP----FTGDSPDSVAYQHVREDPIPPSA 241
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 111/287 (38%), Gaps = 30/287 (10%)
Query: 297 NNLIGRGGFGSVYKARI--QDGMEVAVKVFDLQ----YGRAFKSFDIECDMXXXXXXXXX 350
N +IGRG FG VY + DG ++ V L G + M
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
+ +VL YM HG L + + + + + + VA ++YL S
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 169
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMAPEYGRE 468
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 229
Query: 469 GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQK 528
+ +T DV+SFG++L E TR P P + D + +
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 270
Query: 529 DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575
C ++ + +KC E R + E+V+R+ I + +
Sbjct: 271 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 317
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 111/287 (38%), Gaps = 30/287 (10%)
Query: 297 NNLIGRGGFGSVYKARI--QDGMEVAVKVFDLQ----YGRAFKSFDIECDMXXXXXXXXX 350
N +IGRG FG VY + DG ++ V L G + M
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
+ +VL YM HG L + + + + + + VA ++YL S
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 170
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMAPEYGRE 468
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 171 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 230
Query: 469 GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQK 528
+ +T DV+SFG++L E TR P P + D + +
Sbjct: 231 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 271
Query: 529 DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575
C ++ + +KC E R + E+V+R+ I + +
Sbjct: 272 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 318
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 111/287 (38%), Gaps = 30/287 (10%)
Query: 297 NNLIGRGGFGSVYKARI--QDGMEVAVKVFDLQ----YGRAFKSFDIECDMXXXXXXXXX 350
N +IGRG FG VY + DG ++ V L G + M
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
+ +VL YM HG L + + + + + + VA ++YL S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 151
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMAPEYGRE 468
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 469 GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQK 528
+ +T DV+SFG++L E TR P P + D + +
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 252
Query: 529 DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575
C ++ + +KC E R + E+V+R+ I + +
Sbjct: 253 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 131/300 (43%), Gaps = 32/300 (10%)
Query: 294 FSENNL-----IGRGGFGSVYKAR---IQD--GMEVAVKVFDLQYGRAFKSFDIECDMXX 343
F E +L +G+G FGSV R +QD G VAVK + F+ E ++
Sbjct: 8 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 67
Query: 344 XXXXXXXXXXXXXXXXDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 401
+ L++EY+P+GSL L +D + L +
Sbjct: 68 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 127
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 459
+EYL + IH +L N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 128 MEYLG---TKRYIHRNLATRNILVENENRVKIGDFGLTK-VLPQDKEYYKVKEPGESPIF 183
Query: 460 YMAPEYGREGQVSTNGDVYSFGIMLMETFT----RKKPTDEIFFGDMTLKHWVNDLLPIS 515
+ APE E + S DV+SFG++L E FT K P E F M ++
Sbjct: 184 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE--FMRMIGNDKQGQMIVFH 241
Query: 516 VMEIVDAN-LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574
++E++ N L + D C I+ + +C + QR + +++ R+ +IRD++
Sbjct: 242 LIELLKNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 294
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 111/287 (38%), Gaps = 30/287 (10%)
Query: 297 NNLIGRGGFGSVYKARI--QDGMEVAVKVFDLQ----YGRAFKSFDIECDMXXXXXXXXX 350
N +IGRG FG VY + DG ++ V L G + M
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
+ +VL YM HG L + + + + + + VA ++YL S
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 149
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMAPEYGRE 468
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 209
Query: 469 GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQK 528
+ +T DV+SFG++L E TR P P + D + +
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 250
Query: 529 DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575
C ++ + +KC E R + E+V+R+ I + +
Sbjct: 251 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 297
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 111/287 (38%), Gaps = 30/287 (10%)
Query: 297 NNLIGRGGFGSVYKARI--QDGMEVAVKVFDLQ----YGRAFKSFDIECDMXXXXXXXXX 350
N +IGRG FG VY + DG ++ V L G + M
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
+ +VL YM HG L + + + + + + VA ++YL S
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 143
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMAPEYGRE 468
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 203
Query: 469 GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQK 528
+ +T DV+SFG++L E TR P P + D + +
Sbjct: 204 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 244
Query: 529 DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575
C ++ + +KC E R + E+V+R+ I + +
Sbjct: 245 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 291
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 112/287 (39%), Gaps = 30/287 (10%)
Query: 297 NNLIGRGGFGSVYKARI--QDGMEVAVKVFDLQ----YGRAFKSFDIECDMXXXXXXXXX 350
N +IGRG FG VY + DG ++ V L G + M
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
+ +VL YM HG L + + + + + + VA +++L S
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 152
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMAPEYGRE 468
+H DL N +LD+ ++DFG+A+ +L ++ +T A + +MA E +
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 469 GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQK 528
+ +T DV+SFG++L E TR P P + D + +
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 253
Query: 529 DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575
C ++ + +KC E R + E+V+R+ I + +
Sbjct: 254 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 300
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 111/287 (38%), Gaps = 30/287 (10%)
Query: 297 NNLIGRGGFGSVYKARI--QDGMEVAVKVFDLQ----YGRAFKSFDIECDMXXXXXXXXX 350
N +IGRG FG VY + DG ++ V L G + M
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
+ +VL YM HG L + + + + + + VA ++YL S
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 146
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMAPEYGRE 468
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 206
Query: 469 GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQK 528
+ +T DV+SFG++L E TR P P + D + +
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 247
Query: 529 DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575
C ++ + +KC E R + E+V+R+ I + +
Sbjct: 248 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 111/287 (38%), Gaps = 30/287 (10%)
Query: 297 NNLIGRGGFGSVYKARI--QDGMEVAVKVFDLQ----YGRAFKSFDIECDMXXXXXXXXX 350
N +IGRG FG VY + DG ++ V L G + M
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
+ +VL YM HG L + + + + + + VA ++YL S
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 148
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMAPEYGRE 468
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 208
Query: 469 GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQK 528
+ +T DV+SFG++L E TR P P + D + +
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 249
Query: 529 DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575
C ++ + +KC E R + E+V+R+ I + +
Sbjct: 250 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 296
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 111/287 (38%), Gaps = 30/287 (10%)
Query: 297 NNLIGRGGFGSVYKARI--QDGMEVAVKVFDLQ----YGRAFKSFDIECDMXXXXXXXXX 350
N +IGRG FG VY + DG ++ V L G + M
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
+ +VL YM HG L + + + + + + VA ++YL S
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 150
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMAPEYGRE 468
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 210
Query: 469 GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQK 528
+ +T DV+SFG++L E TR P P + D + +
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 251
Query: 529 DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575
C ++ + +KC E R + E+V+R+ I + +
Sbjct: 252 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 298
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 16/221 (7%)
Query: 300 IGRGGFGSVYKARIQD---GMEVAVKVFDL---QYGRAFKSFDIECDMXXXXXXXXXXXX 353
+G GG +VY A +D ++VA+K + + K F+ E
Sbjct: 19 LGGGGMSTVYLA--EDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76
Query: 354 XXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPI 413
DD LV+EY+ +L + + S+ L + +N + +++ H + I
Sbjct: 77 IDVDEEDDCYYLVMEYIEGPTLSEYI-ESHGPLSVDTAINFTNQILDGIKHAH---DMRI 132
Query: 414 IHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQT-QTLATIGYMAPEYGREGQVS 472
+H D+KP N+L+D N + DFG+AK L + SLTQT L T+ Y +PE +
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAKAL--SETSLTQTNHVLGTVQYFSPEQAKGEATD 190
Query: 473 TNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLP 513
D+YS GI+L E + P + + +KH + D +P
Sbjct: 191 ECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH-IQDSVP 230
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 120/293 (40%), Gaps = 40/293 (13%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVF-------DLQYGRAFKSFDIECDM 341
A N IG+GGFG V+K R ++D VA+K + + F+ F E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQRE--V 74
Query: 342 XXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 401
+ +V+E++P G L L + + +L +M+D+A
Sbjct: 75 FIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 402 LEYLHFGYSVPIIHCDLKPSNVL---LDDN--MVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
+EY+ + PI+H DL+ N+ LD+N + A ++DFG+++ + L L
Sbjct: 135 IEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGL-----LG 188
Query: 457 TIGYMAPEY--GREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPI 514
+MAPE E + D YSF ++L T + P DE +G +
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF---------- 238
Query: 515 SVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
N++ ++ T C + N+ C P++R + IV L
Sbjct: 239 -------INMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 111/287 (38%), Gaps = 30/287 (10%)
Query: 297 NNLIGRGGFGSVYKARI--QDGMEVAVKVFDLQ----YGRAFKSFDIECDMXXXXXXXXX 350
N +IGRG FG VY + DG ++ V L G + M
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
+ +VL YM HG L + + + + + + VA ++YL S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 151
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMAPEYGRE 468
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 469 GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQK 528
+ +T DV+SFG++L E TR P P + D + +
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 252
Query: 529 DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575
C ++ + +KC E R + E+V+R+ I + +
Sbjct: 253 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 9/124 (7%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT-LA 456
+A A + L+F + IIH D+KP+N+++ + DFG+A+ + S+TQT +
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGD----MTLKHWVNDLL 512
T Y++PE R V DVYS G +L E T + P F GD + +H D +
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPI 237
Query: 513 PISV 516
P S
Sbjct: 238 PPSA 241
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 9/124 (7%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT-LA 456
+A A + L+F + IIH D+KP+N+++ + DFG+A+ + S+TQT +
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGD----MTLKHWVNDLL 512
T Y++PE R V DVYS G +L E T + P F GD + +H D +
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPI 237
Query: 513 PISV 516
P S
Sbjct: 238 PPSA 241
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 21/231 (9%)
Query: 299 LIGRGGFGSVYKAR-IQDGMEVAVKVF--DLQ-----YGRAFKSFDIECDMXXXXXXXXX 350
++G GG V+ AR ++D +VAVKV DL Y R + +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
+V+EY+ +L +++ + + I + +A A + L+F +
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADACQALNFSHQ 134
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT-LATIGYMAPEYGREG 469
IIH D+KP+N+L+ + DFG+A+ + S+ QT + T Y++PE R
Sbjct: 135 NGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGD 194
Query: 470 QVSTNGDVYSFGIMLMETFTRKKPTDEIFFGD----MTLKHWVNDLLPISV 516
V DVYS G +L E T + P F GD + +H D +P S
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPIPPSA 241
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 9/124 (7%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT-LA 456
+A A + L+F + IIH D+KP+N+++ + DFG+A+ + S+TQT +
Sbjct: 139 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 198
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGD----MTLKHWVNDLL 512
T Y++PE R V DVYS G +L E T + P F GD + +H D +
Sbjct: 199 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPI 254
Query: 513 PISV 516
P S
Sbjct: 255 PPSA 258
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 132/297 (44%), Gaps = 39/297 (13%)
Query: 290 ATNGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFDLQYG-RAFKSFDIECDMXXX 344
ATN S + ++G G FG V R++ + VA+K + Y + + F E +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 345 XXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEY 404
+V EYM +GSL+ L + + Q + ++ +AS ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 405 LH-FGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ-TLATIGYMA 462
L GY +H DL N+L++ N+V +SDFG+A+ L + ++ T+ I + +
Sbjct: 163 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 463 PEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDA 522
PE + ++ DV+S+GI+L E + +G+ +W E+ +
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS---------YGER--PYW----------EMSNQ 257
Query: 523 NLLSQKDEHFTTKG--QCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLKN 577
+++ DE + C + ++ L + C + R ++IV+ I D L++N
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 310
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 95/223 (42%), Gaps = 20/223 (8%)
Query: 283 TYLEIFQATNGFSEN---------NLIGRGGFGSVYKARI----QDGMEVAVKVFDLQYG 329
TY E +A F+ +IG G G V R+ Q + VA+K Y
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 330 -RAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDI 388
R + F E + +V EYM +GSL+ L + + I
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI 150
Query: 389 FQRLNIMIDVASALEYLH-FGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE-D 446
Q + ++ V + + YL GY +H DL NVL+D N+V +SDFG+++ L + D
Sbjct: 151 MQLVGMLRGVGAGMRYLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206
Query: 447 QSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT 489
+ T T I + APE S+ DV+SFG+++ E
Sbjct: 207 AAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 66/126 (52%), Gaps = 9/126 (7%)
Query: 365 LVLEYMPHGSLEKCLYS-SNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
+V EYM GSL L S +L L +DV A+EYL +H DL NV
Sbjct: 77 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNV 133
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ ++ VA +SDFG+ K + S TQ + + APE RE + ST DV+SFGI+
Sbjct: 134 LVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGIL 188
Query: 484 LMETFT 489
L E ++
Sbjct: 189 LWEIYS 194
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 136/310 (43%), Gaps = 39/310 (12%)
Query: 277 SNQRRFTYLEIFQATNGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFDLQYG-RA 331
S Q + + ATN S + ++G G FG V R++ + VA+K + Y +
Sbjct: 2 STQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 60
Query: 332 FKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQR 391
+ F E + +V EYM +GSL+ L + + Q
Sbjct: 61 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 120
Query: 392 LNIMIDVASALEYLH-FGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLT 450
+ ++ +AS ++YL GY +H DL N+L++ N+V +SDFG+++ L + ++
Sbjct: 121 VGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 176
Query: 451 QTQTLAT-IGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVN 509
T+ I + +PE + ++ DV+S+GI+L E + +G+ +W
Sbjct: 177 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS---------YGER--PYW-- 223
Query: 510 DLLPISVMEIVDANLLSQKDEHFTTKG--QCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
E+ + +++ DE + C + ++ L + C + R ++IV+
Sbjct: 224 --------EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS-- 273
Query: 568 LKIRDSLLKN 577
I D L++N
Sbjct: 274 --ILDKLIRN 281
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 66/126 (52%), Gaps = 9/126 (7%)
Query: 365 LVLEYMPHGSLEKCLYS-SNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
+V EYM GSL L S +L L +DV A+EYL +H DL NV
Sbjct: 92 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNV 148
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ ++ VA +SDFG+ K + S TQ + + APE RE + ST DV+SFGI+
Sbjct: 149 LVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGIL 203
Query: 484 LMETFT 489
L E ++
Sbjct: 204 LWEIYS 209
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 95/223 (42%), Gaps = 20/223 (8%)
Query: 283 TYLEIFQATNGFSEN---------NLIGRGGFGSVYKARI----QDGMEVAVKVFDLQYG 329
TY E +A F+ +IG G G V R+ Q + VA+K Y
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 330 -RAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDI 388
R + F E + +V EYM +GSL+ L + + I
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI 150
Query: 389 FQRLNIMIDVASALEYLH-FGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE-D 446
Q + ++ V + + YL GY +H DL NVL+D N+V +SDFG+++ L + D
Sbjct: 151 MQLVGMLRGVGAGMRYLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206
Query: 447 QSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT 489
+ T T I + APE S+ DV+SFG+++ E
Sbjct: 207 AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 365 LVLEYMPHGSLEKCLYS-SNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
+V EYM GSL L S +L L +DV A+EYL +H DL NV
Sbjct: 83 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNV 139
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ ++ VA +SDFG+ K + S TQ + + APE RE ST DV+SFGI+
Sbjct: 140 LVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGIL 194
Query: 484 LMETFT 489
L E ++
Sbjct: 195 LWEIYS 200
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 119/293 (40%), Gaps = 40/293 (13%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVF-------DLQYGRAFKSFDIECDM 341
A N IG+GGFG V+K R ++D VA+K + + F+ F E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQRE--V 74
Query: 342 XXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 401
+ +V+E++P G L L + + +L +M+D+A
Sbjct: 75 FIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 402 LEYLHFGYSVPIIHCDLKPSNVL---LDDN--MVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
+EY+ + PI+H DL+ N+ LD+N + A ++DFG ++ + L L
Sbjct: 135 IEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGL-----LG 188
Query: 457 TIGYMAPEY--GREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPI 514
+MAPE E + D YSF ++L T + P DE +G +
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF---------- 238
Query: 515 SVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
N++ ++ T C + N+ C P++R + IV L
Sbjct: 239 -------INMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 111/287 (38%), Gaps = 30/287 (10%)
Query: 297 NNLIGRGGFGSVYKARI--QDGMEVAVKVFDLQ----YGRAFKSFDIECDMXXXXXXXXX 350
N +IGRG FG VY + DG ++ V L G + M
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
+ +VL YM HG L + + + + + + VA +++L S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 151
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMAPEYGRE 468
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 469 GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQK 528
+ +T DV+SFG++L E TR P P + D + +
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 252
Query: 529 DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575
C ++ + +KC E R + E+V+R+ I + +
Sbjct: 253 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 66/126 (52%), Gaps = 9/126 (7%)
Query: 365 LVLEYMPHGSLEKCLYS-SNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
+V EYM GSL L S +L L +DV A+EYL +H DL NV
Sbjct: 264 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNV 320
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ ++ VA +SDFG+ K + S TQ + + APE RE + ST DV+SFGI+
Sbjct: 321 LVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGIL 375
Query: 484 LMETFT 489
L E ++
Sbjct: 376 LWEIYS 381
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 111/287 (38%), Gaps = 30/287 (10%)
Query: 297 NNLIGRGGFGSVYKARI--QDGMEVAVKVFDLQ----YGRAFKSFDIECDMXXXXXXXXX 350
N +IGRG FG VY + DG ++ V L G + M
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
+ +VL YM HG L + + + + + + VA +++L S
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 152
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMAPEYGRE 468
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 469 GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQK 528
+ +T DV+SFG++L E TR P P + D + +
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 253
Query: 529 DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575
C ++ + +KC E R + E+V+R+ I + +
Sbjct: 254 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 300
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 111/287 (38%), Gaps = 30/287 (10%)
Query: 297 NNLIGRGGFGSVYKARI--QDGMEVAVKVFDLQ----YGRAFKSFDIECDMXXXXXXXXX 350
N +IGRG FG VY + DG ++ V L G + M
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
+ +VL YM HG L + + + + + + VA +++L S
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 156
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMAPEYGRE 468
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 216
Query: 469 GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQK 528
+ +T DV+SFG++L E TR P P + D + +
Sbjct: 217 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 257
Query: 529 DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575
C ++ + +KC E R + E+V+R+ I + +
Sbjct: 258 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 304
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 111/287 (38%), Gaps = 30/287 (10%)
Query: 297 NNLIGRGGFGSVYKARI--QDGMEVAVKVFDLQ----YGRAFKSFDIECDMXXXXXXXXX 350
N +IGRG FG VY + DG ++ V L G + M
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
+ +VL YM HG L + + + + + + VA +++L S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 151
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMAPEYGRE 468
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 469 GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQK 528
+ +T DV+SFG++L E TR P P + D + +
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 252
Query: 529 DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575
C ++ + +KC E R + E+V+R+ I + +
Sbjct: 253 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 111/287 (38%), Gaps = 30/287 (10%)
Query: 297 NNLIGRGGFGSVYKARI--QDGMEVAVKVFDLQ----YGRAFKSFDIECDMXXXXXXXXX 350
N +IGRG FG VY + DG ++ V L G + M
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
+ +VL YM HG L + + + + + + VA +++L S
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 210
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMAPEYGRE 468
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 270
Query: 469 GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQK 528
+ +T DV+SFG++L E TR P P + D + +
Sbjct: 271 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 311
Query: 529 DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575
C ++ + +KC E R + E+V+R+ I + +
Sbjct: 312 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 111/287 (38%), Gaps = 30/287 (10%)
Query: 297 NNLIGRGGFGSVYKARI--QDGMEVAVKVFDLQ----YGRAFKSFDIECDMXXXXXXXXX 350
N +IGRG FG VY + DG ++ V L G + M
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
+ +VL YM HG L + + + + + + VA +++L S
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 149
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMAPEYGRE 468
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 209
Query: 469 GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQK 528
+ +T DV+SFG++L E TR P P + D + +
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 250
Query: 529 DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575
C ++ + +KC E R + E+V+R+ I + +
Sbjct: 251 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 297
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYG--RAFKSFDIECDMXXXXXXXXXXXXXXXX 357
IG G FG+VYK + +VAVK+ ++ + ++F E +
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 417
A+V ++ SL L++S ++ + ++I A ++YLH + IIH D
Sbjct: 90 TKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 145
Query: 418 LKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR---EGQVSTN 474
LK +N+ L ++ + DFG+A + S Q +I +MAPE R S
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 475 GDVYSFGIMLMETFTRKKPTDEI 497
DVY+FGI+L E T + P I
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNI 228
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYG--RAFKSFDIECDMXXXXXXXXXXXXXXXX 357
IG G FG+VYK + +VAVK+ ++ + ++F E +
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 417
A+V ++ SL L++S ++ + ++I A ++YLH + IIH D
Sbjct: 90 TAPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 145
Query: 418 LKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR---EGQVSTN 474
LK +N+ L ++ + DFG+A + S Q +I +MAPE R S
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 475 GDVYSFGIMLMETFTRKKPTDEI 497
DVY+FGI+L E T + P I
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNI 228
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 132/297 (44%), Gaps = 39/297 (13%)
Query: 290 ATNGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFDLQYG-RAFKSFDIECDMXXX 344
ATN S + ++G G FG V R++ + VA+K + Y + + F E +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 345 XXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEY 404
+V EYM +GSL+ L + + Q + ++ +AS ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 405 LH-FGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ-TLATIGYMA 462
L GY +H DL N+L++ N+V +SDFG+++ L + ++ T+ I + +
Sbjct: 163 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 463 PEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDA 522
PE + ++ DV+S+GI+L E + +G+ +W E+ +
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS---------YGER--PYW----------EMSNQ 257
Query: 523 NLLSQKDEHFTTKG--QCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLKN 577
+++ DE + C + ++ L + C + R ++IV+ I D L++N
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 310
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 125/318 (39%), Gaps = 46/318 (14%)
Query: 272 NMPRISNQRRFTYLEIFQATNGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVF- 324
MP I+ ++ EI + F E +G FG VYK + + VA+K
Sbjct: 8 EMPLINQHKQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK 65
Query: 325 DLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNY 384
D G + F E + D +++ Y HG L + L +
Sbjct: 66 DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSP 125
Query: 385 ILDIFQR---------------LNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM 429
D+ ++++ +A+ +EYL S ++H DL NVL+ D +
Sbjct: 126 HSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKL 182
Query: 430 VAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT 489
+SD G+ + + D +L I +MAPE G+ S + D++S+G++L E F+
Sbjct: 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
Query: 490 RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKC 549
+G L P D + + + C ++++ L ++C
Sbjct: 243 ---------YG----------LQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIEC 283
Query: 550 TVESPEQRINAKEIVTRL 567
E P +R K+I +RL
Sbjct: 284 WNEFPSRRPRFKDIHSRL 301
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 132/297 (44%), Gaps = 39/297 (13%)
Query: 290 ATNGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFDLQYG-RAFKSFDIECDMXXX 344
ATN S + ++G G FG V R++ + VA+K + Y + + F E +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 345 XXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEY 404
+V EYM +GSL+ L + + Q + ++ +AS ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 405 LH-FGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ-TLATIGYMA 462
L GY +H DL N+L++ N+V +SDFG+++ L + ++ T+ I + +
Sbjct: 163 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 463 PEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDA 522
PE + ++ DV+S+GI+L E + +G+ +W E+ +
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS---------YGER--PYW----------EMSNQ 257
Query: 523 NLLSQKDEHFTTKG--QCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLKN 577
+++ DE + C + ++ L + C + R ++IV+ I D L++N
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 310
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 132/297 (44%), Gaps = 39/297 (13%)
Query: 290 ATNGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFDLQYG-RAFKSFDIECDMXXX 344
ATN S + ++G G FG V R++ + VA+K + Y + + F E +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 345 XXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEY 404
+V EYM +GSL+ L + + Q + ++ +AS ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 405 LH-FGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ-TLATIGYMA 462
L GY +H DL N+L++ N+V +SDFG+++ L + ++ T+ I + +
Sbjct: 163 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 463 PEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDA 522
PE + ++ DV+S+GI+L E + +G+ +W E+ +
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS---------YGER--PYW----------EMSNQ 257
Query: 523 NLLSQKDEHFTTKG--QCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLKN 577
+++ DE + C + ++ L + C + R ++IV+ I D L++N
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 310
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 132/297 (44%), Gaps = 39/297 (13%)
Query: 290 ATNGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFDLQYG-RAFKSFDIECDMXXX 344
ATN S + ++G G FG V R++ + VA+K + Y + + F E +
Sbjct: 42 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 100
Query: 345 XXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEY 404
+V EYM +GSL+ L + + Q + ++ +AS ++Y
Sbjct: 101 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 160
Query: 405 LH-FGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ-TLATIGYMA 462
L GY +H DL N+L++ N+V +SDFG+++ L + ++ T+ I + +
Sbjct: 161 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 216
Query: 463 PEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDA 522
PE + ++ DV+S+GI+L E + +G+ +W E+ +
Sbjct: 217 PEAIAYRKFTSASDVWSYGIVLWEVMS---------YGER--PYW----------EMSNQ 255
Query: 523 NLLSQKDEHFTTKG--QCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLKN 577
+++ DE + C + ++ L + C + R ++IV+ I D L++N
Sbjct: 256 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 308
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 132/297 (44%), Gaps = 39/297 (13%)
Query: 290 ATNGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFDLQYG-RAFKSFDIECDMXXX 344
ATN S + ++G G FG V R++ + VA+K + Y + + F E +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 345 XXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEY 404
+V EYM +GSL+ L + + Q + ++ +AS ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 405 LH-FGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ-TLATIGYMA 462
L GY +H DL N+L++ N+V +SDFG+++ L + ++ T+ I + +
Sbjct: 163 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 463 PEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDA 522
PE + ++ DV+S+GI+L E + +G+ +W E+ +
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS---------YGER--PYW----------EMSNQ 257
Query: 523 NLLSQKDEHFTTKG--QCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLKN 577
+++ DE + C + ++ L + C + R ++IV+ I D L++N
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 310
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYG--RAFKSFDIECDMXXXXXXXXXXXXXXXX 357
IG G FG+VYK + +VAVK+ ++ + ++F E +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 417
A+V ++ SL L+ ++ + ++I A ++YLH + IIH D
Sbjct: 74 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 418 LKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR---EGQVSTN 474
LK +N+ L +++ + DFG+A + S Q +I +MAPE R + S
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 475 GDVYSFGIMLMETFTRKKPTDEI 497
DVY+FGI+L E T + P I
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNI 212
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYG--RAFKSFDIECDMXXXXXXXXXXXXXXXX 357
IG G FG+VYK + +VAVK+ ++ + ++F E +
Sbjct: 36 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 417
A+V ++ SL L+ ++ + ++I A ++YLH + IIH D
Sbjct: 94 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 149
Query: 418 LKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR---EGQVSTN 474
LK +N+ L +++ + DFG+A + S Q +I +MAPE R + S
Sbjct: 150 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 209
Query: 475 GDVYSFGIMLMETFTRKKPTDEI 497
DVY+FGI+L E T + P I
Sbjct: 210 SDVYAFGIVLYELMTGQLPYSNI 232
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 131/297 (44%), Gaps = 39/297 (13%)
Query: 290 ATNGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFDLQYG-RAFKSFDIECDMXXX 344
ATN S + ++G G FG V R++ + VA+K + Y + + F E +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 345 XXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEY 404
+V EYM +GSL+ L + + Q + ++ +AS ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 405 LH-FGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ-TLATIGYMA 462
L GY +H DL N+L++ N+V +SDFG+ + L + ++ T+ I + +
Sbjct: 163 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 463 PEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDA 522
PE + ++ DV+S+GI+L E + +G+ +W E+ +
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS---------YGER--PYW----------EMSNQ 257
Query: 523 NLLSQKDEHFTTKG--QCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLKN 577
+++ DE + C + ++ L + C + R ++IV+ I D L++N
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 310
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYG--RAFKSFDIECDMXXXXXXXXXXXXXXXX 357
IG G FG+VYK + +VAVK+ ++ + ++F E +
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 417
A+V ++ SL L+ ++ + ++I A ++YLH + IIH D
Sbjct: 102 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 157
Query: 418 LKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR---EGQVSTN 474
LK +N+ L +++ + DFG+A + S Q +I +MAPE R + S
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 475 GDVYSFGIMLMETFTRKKPTDEI 497
DVY+FGI+L E T + P I
Sbjct: 218 SDVYAFGIVLYELMTGQLPYSNI 240
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 119/293 (40%), Gaps = 40/293 (13%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVF-------DLQYGRAFKSFDIECDM 341
A N IG+GGFG V+K R ++D VA+K + + F+ F E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQRE--V 74
Query: 342 XXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 401
+ +V+E++P G L L + + +L +M+D+A
Sbjct: 75 FIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 402 LEYLHFGYSVPIIHCDLKPSNVL---LDDN--MVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
+EY+ + PI+H DL+ N+ LD+N + A ++DF +++ + L L
Sbjct: 135 IEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGL-----LG 188
Query: 457 TIGYMAPEY--GREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPI 514
+MAPE E + D YSF ++L T + P DE +G +
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF---------- 238
Query: 515 SVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
N++ ++ T C + N+ C P++R + IV L
Sbjct: 239 -------INMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYG--RAFKSFDIECDMXXXXXXXXXXXXXXXX 357
IG G FG+VYK + +VAVK+ ++ + ++F E +
Sbjct: 20 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 417
A+V ++ SL L++S ++ + ++I A ++YLH + IIH D
Sbjct: 78 TKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 133
Query: 418 LKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR---EGQVSTN 474
LK +N+ L ++ + DFG+A + S Q +I +MAPE R S
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 193
Query: 475 GDVYSFGIMLMETFTRKKPTDEI 497
DVY+FGI+L E T + P I
Sbjct: 194 SDVYAFGIVLYELMTGQLPYSNI 216
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 106/281 (37%), Gaps = 38/281 (13%)
Query: 300 IGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKS-FDIECDMXXXXXXXXXXXXXXXX 357
IGRG FG V+ R++ D VAVK K+ F E +
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 417
+V+E + G L + L + L ++ D A+ +EYL S IH D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 418 LKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDV 477
L N L+ + V +SDFGM++ + + + + APE G+ S+ DV
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDV 298
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQ 537
+SFGI+L ETF S+ NL +Q+ F KG
Sbjct: 299 WSFGILLWETF--------------------------SLGASPYPNLSNQQTREFVEKGG 332
Query: 538 -------CVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIR 571
C +F L +C P QR + I L IR
Sbjct: 333 RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 32/262 (12%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G+G FG V+ VA+K L+ G ++
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 360 DDFKALVLEYMPHGSLEKCLY-SSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
++ +V EYM GSL L + L + Q +++ +AS + Y+ + +H DL
Sbjct: 74 EEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 130
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAPEYGREGQVSTNGDV 477
+ +N+L+ +N+V ++DFG+A+ L ED T Q I + APE G+ + DV
Sbjct: 131 RAANILVGENLVCKVADFGLAR--LIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 188
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHF--TTK 535
+SFGI+L E T+ + +P M V+ +L Q + +
Sbjct: 189 WSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRMPCP 227
Query: 536 GQCVSFIFNLAMKCTVESPEQR 557
+C + +L +C + PE+R
Sbjct: 228 PECPESLHDLMCQCWRKEPEER 249
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYG--RAFKSFDIECDMXXXXXXXXXXXXXXXX 357
IG G FG+VYK + +VAVK+ ++ + ++F E +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 417
A+V ++ SL L+ ++ + ++I A ++YLH + IIH D
Sbjct: 74 TAPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 418 LKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR---EGQVSTN 474
LK +N+ L +++ + DFG+A + S Q +I +MAPE R + S
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 475 GDVYSFGIMLMETFTRKKPTDEI 497
DVY+FGI+L E T + P I
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNI 212
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYG--RAFKSFDIECDMXXXXXXXXXXXXXXXX 357
IG G FG+VYK + +VAVK+ ++ + ++F E +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 417
A+V ++ SL L+ ++ + ++I A ++YLH + IIH D
Sbjct: 74 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 418 LKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR---EGQVSTN 474
LK +N+ L +++ + DFG+A + S Q +I +MAPE R + S
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 475 GDVYSFGIMLMETFTRKKPTDEI 497
DVY+FGI+L E T + P I
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNI 212
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYG--RAFKSFDIECDMXXXXXXXXXXXXXXXX 357
IG G FG+VYK + +VAVK+ ++ + ++F E +
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 417
A+V ++ SL L+ ++ + ++I A ++YLH + IIH D
Sbjct: 79 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 134
Query: 418 LKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR---EGQVSTN 474
LK +N+ L +++ + DFG+A + S Q +I +MAPE R + S
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 475 GDVYSFGIMLMETFTRKKPTDEI 497
DVY+FGI+L E T + P I
Sbjct: 195 SDVYAFGIVLYELMTGQLPYSNI 217
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYG--RAFKSFDIECDMXXXXXXXXXXXXXXXX 357
IG G FG+VYK + +VAVK+ ++ + ++F E +
Sbjct: 18 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 417
A+V ++ SL L+ ++ + ++I A ++YLH + IIH D
Sbjct: 76 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 131
Query: 418 LKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR---EGQVSTN 474
LK +N+ L +++ + DFG+A + S Q +I +MAPE R + S
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 191
Query: 475 GDVYSFGIMLMETFTRKKPTDEI 497
DVY+FGI+L E T + P I
Sbjct: 192 SDVYAFGIVLYELMTGQLPYSNI 214
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYG--RAFKSFDIECDMXXXXXXXXXXXXXXXX 357
IG G FG+VYK + +VAVK+ ++ + ++F E +
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 417
A+V ++ SL L+ ++ + ++I A ++YLH + IIH D
Sbjct: 79 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 134
Query: 418 LKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR---EGQVSTN 474
LK +N+ L +++ + DFG+A + S Q +I +MAPE R + S
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 475 GDVYSFGIMLMETFTRKKPTDEI 497
DVY+FGI+L E T + P I
Sbjct: 195 SDVYAFGIVLYELMTGQLPYSNI 217
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYG--RAFKSFDIECDMXXXXXXXXXXXXXXXX 357
IG G FG+VYK + +VAVK+ ++ + ++F E +
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 417
A+V ++ SL L+ ++ + ++I A ++YLH + IIH D
Sbjct: 102 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 157
Query: 418 LKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR---EGQVSTN 474
LK +N+ L +++ + DFG+A + S Q +I +MAPE R + S
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 475 GDVYSFGIMLMETFTRKKPTDEI 497
DVY+FGI+L E T + P I
Sbjct: 218 SDVYAFGIVLYELMTGQLPYSNI 240
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 106/281 (37%), Gaps = 38/281 (13%)
Query: 300 IGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKS-FDIECDMXXXXXXXXXXXXXXXX 357
IGRG FG V+ R++ D VAVK K+ F E +
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 417
+V+E + G L + L + L ++ D A+ +EYL S IH D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 418 LKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDV 477
L N L+ + V +SDFGM++ + + + + APE G+ S+ DV
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDV 298
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQ 537
+SFGI+L ETF S+ NL +Q+ F KG
Sbjct: 299 WSFGILLWETF--------------------------SLGASPYPNLSNQQTREFVEKGG 332
Query: 538 -------CVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIR 571
C +F L +C P QR + I L IR
Sbjct: 333 RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYG--RAFKSFDIECDMXXXXXXXXXXXXXXXX 357
IG G FG+VYK + +VAVK+ ++ + ++F E +
Sbjct: 43 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 417
A+V ++ SL L+ ++ + ++I A ++YLH + IIH D
Sbjct: 101 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 156
Query: 418 LKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR---EGQVSTN 474
LK +N+ L +++ + DFG+A + S Q +I +MAPE R + S
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 216
Query: 475 GDVYSFGIMLMETFTRKKPTDEI 497
DVY+FGI+L E T + P I
Sbjct: 217 SDVYAFGIVLYELMTGQLPYSNI 239
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 131/296 (44%), Gaps = 37/296 (12%)
Query: 290 ATNGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFDLQYG-RAFKSFDIECDMXXX 344
ATN S + ++G G FG V R++ + VA+K + Y + + F E +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 345 XXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEY 404
+V EYM +GSL+ L + + Q + ++ +AS ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 405 LHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ-TLATIGYMAP 463
L + +H DL N+L++ N+V +SDFG+++ L + ++ T+ I + +P
Sbjct: 163 LS---DMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 464 EYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDAN 523
E + ++ DV+S+GI+L E + +G+ +W E+ + +
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMS---------YGER--PYW----------EMSNQD 258
Query: 524 LLSQKDEHFTTKG--QCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLKN 577
++ DE + C + ++ L + C + R ++IV+ I D L++N
Sbjct: 259 VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 310
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 32/262 (12%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G+G FG V+ VA+K L+ G ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 360 DDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
++ +V+EYM GSL L L + Q +++ +AS + Y+ + +H DL
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAPEYGREGQVSTNGDV 477
+ +N+L+ +N+V ++DFG+A+ L ED T Q I + APE G+ + DV
Sbjct: 141 RAANILVGENLVCKVADFGLAR--LIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHF--TTK 535
+SFGI+L E T+ + +P M V+ +L Q + +
Sbjct: 199 WSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRMPCP 237
Query: 536 GQCVSFIFNLAMKCTVESPEQR 557
+C + +L +C + PE+R
Sbjct: 238 PECPESLHDLMCQCWRKDPEER 259
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 32/262 (12%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G+G FG V+ VA+K L+ G ++
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 360 DDFKALVLEYMPHGSLEKCLY-SSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
++ +V EYM GSL L + L + Q +++ +AS + Y+ + +H DL
Sbjct: 77 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 133
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAPEYGREGQVSTNGDV 477
+ +N+L+ +N+V ++DFG+A+ L ED T Q I + APE G+ + DV
Sbjct: 134 RAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 191
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHF--TTK 535
+SFGI+L E T+ + +P M V+ +L Q + +
Sbjct: 192 WSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRMPCP 230
Query: 536 GQCVSFIFNLAMKCTVESPEQR 557
+C + +L +C + PE+R
Sbjct: 231 PECPESLHDLMCQCWRKEPEER 252
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 32/262 (12%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G+G FG V+ VA+K L+ G ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 360 DDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
++ +V+EYM GSL L L + Q +++ +AS + Y+ + +H DL
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAPEYGREGQVSTNGDV 477
+ +N+L+ +N+V ++DFG+A+ L ED T Q I + APE G+ + DV
Sbjct: 141 RAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHF--TTK 535
+SFGI+L E T+ + +P M V+ +L Q + +
Sbjct: 199 WSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRMPCP 237
Query: 536 GQCVSFIFNLAMKCTVESPEQR 557
+C + +L +C + PE+R
Sbjct: 238 PECPESLHDLMCQCWRKDPEER 259
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
+V EY+ +G L L S L+ Q L + DV + +L S IH DL N L
Sbjct: 80 IVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCL 136
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+D ++ +SDFGM + +L +DQ ++ T + + APE + S+ DV++FGI++
Sbjct: 137 VDRDLCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILM 195
Query: 485 METFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFN 544
E F+ G M + N + V+++ + L + H + I+
Sbjct: 196 WEVFS---------LGKMPYDLYTNSEV---VLKVSQGHRLYRP--HLASDT-----IYQ 236
Query: 545 LAMKCTVESPEQRINAKEIVTRLLKIRD 572
+ C E PE+R +++++ + +R+
Sbjct: 237 IMYSCWHELPEKRPTFQQLLSSIEPLRE 264
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 30/197 (15%)
Query: 365 LVLEYMPHGSLEKCLY-SSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
+V EYM GSL L + L + Q +++ +AS + Y+ + +H DL+ +N+
Sbjct: 338 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANI 394
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAPEYGREGQVSTNGDVYSFGI 482
L+ +N+V ++DFG+A+ L ED T Q I + APE G+ + DV+SFGI
Sbjct: 395 LVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 452
Query: 483 MLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHF--TTKGQCVS 540
+L E T+ + +P M V+ +L Q + + +C
Sbjct: 453 LLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRMPCPPECPE 491
Query: 541 FIFNLAMKCTVESPEQR 557
+ +L +C + PE+R
Sbjct: 492 SLHDLMCQCWRKEPEER 508
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 107/270 (39%), Gaps = 34/270 (12%)
Query: 300 IGRGGFGSVYKA-RIQDGMEVAVKVF----DLQYGRAFKSFDIECDMXXXXXXXXXXXXX 354
+G G +GSVYKA + G VA+K DLQ S +CD
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKN 96
Query: 355 XXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 414
+V+EY GS+ + N L + I+ LEYLHF I
Sbjct: 97 TDLW------IVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---I 147
Query: 415 HCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTN 474
H D+K N+LL+ A L+DFG+A L D + + T +MAPE +E +
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGVAGQLT--DXMAKRNXVIGTPFWMAPEVIQEIGYNCV 205
Query: 475 GDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTT 534
D++S GI +E K P D+ P+ + ++ N F
Sbjct: 206 ADIWSLGITAIEMAEGKPP--------------YADIHPMRAIFMIPTN----PPPTFRK 247
Query: 535 KGQCVSFIFNLAMKCTVESPEQRINAKEIV 564
+ +C V+SPEQR A +++
Sbjct: 248 PELWSDNFTDFVKQCLVKSPEQRATATQLL 277
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
++ EYM +G L L + Q L + DV A+EYL S +H DL N L
Sbjct: 96 IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCL 152
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
++D V +SDFG+++ +L +D+ + + + + PE + S+ D+++FG+++
Sbjct: 153 VNDQGVVKVSDFGLSRYVL-DDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 211
Query: 485 METFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFN 544
E ++ K E F T +H L + +L S+K ++
Sbjct: 212 WEIYSLGKMPYERFTNSETAEHIAQGL------RLYRPHLASEK-------------VYT 252
Query: 545 LAMKCTVESPEQRINAKEIVTRLLKIRD 572
+ C E ++R K +++ +L + D
Sbjct: 253 IMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 32/262 (12%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G+G FG V+ VA+K L+ G ++
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 360 DDFKALVLEYMPHGSLEKCLY-SSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
++ +V EYM GSL L + L + Q +++ +AS + Y+ + +H DL
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 306
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAPEYGREGQVSTNGDV 477
+ +N+L+ +N+V ++DFG+A+ L ED T Q I + APE G+ + DV
Sbjct: 307 RAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFT--TK 535
+SFGI+L E T+ + +P M V+ +L Q + +
Sbjct: 365 WSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRMPCP 403
Query: 536 GQCVSFIFNLAMKCTVESPEQR 557
+C + +L +C + PE+R
Sbjct: 404 PECPESLHDLMCQCWRKEPEER 425
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 135/310 (43%), Gaps = 39/310 (12%)
Query: 277 SNQRRFTYLEIFQATNGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFDLQYG-RA 331
S Q + + ATN S + ++G G FG V R++ + VA+K + Y +
Sbjct: 2 STQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 60
Query: 332 FKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQR 391
+ F E + +V E M +GSL+ L + + Q
Sbjct: 61 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL 120
Query: 392 LNIMIDVASALEYLH-FGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLT 450
+ ++ +AS ++YL GY +H DL N+L++ N+V +SDFG+++ L + ++
Sbjct: 121 VGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 176
Query: 451 QTQTLAT-IGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVN 509
T+ I + +PE + ++ DV+S+GI+L E + +G+ +W
Sbjct: 177 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS---------YGER--PYW-- 223
Query: 510 DLLPISVMEIVDANLLSQKDEHFTTKG--QCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
E+ + +++ DE + C + ++ L + C + R ++IV+
Sbjct: 224 --------EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS-- 273
Query: 568 LKIRDSLLKN 577
I D L++N
Sbjct: 274 --ILDKLIRN 281
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 32/262 (12%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G+G FG V+ VA+K L+ G ++
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 360 DDFKALVLEYMPHGSLEKCLY-SSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
++ +V EYM GSL L + L + Q +++ +AS + Y+ + +H DL
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDL 137
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAPEYGREGQVSTNGDV 477
+ +N+L+ +N+V ++DFG+A+ L ED T Q I + APE G+ + DV
Sbjct: 138 RAANILVGENLVCKVADFGLAR--LIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHF--TTK 535
+SFGI+L E T+ + +P M V+ +L Q + +
Sbjct: 196 WSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRMPCP 234
Query: 536 GQCVSFIFNLAMKCTVESPEQR 557
+C + +L +C + PE+R
Sbjct: 235 PECPESLHDLMCQCWRKEPEER 256
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 32/262 (12%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G+G FG V+ VA+K L+ G ++
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 360 DDFKALVLEYMPHGSLEKCLY-SSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
++ +V EYM GSL L + L + Q +++ +AS + Y+ + +H DL
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 306
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAPEYGREGQVSTNGDV 477
+ +N+L+ +N+V ++DFG+A+ L ED T Q I + APE G+ + DV
Sbjct: 307 RAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFT--TK 535
+SFGI+L E T+ + +P M V+ +L Q + +
Sbjct: 365 WSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRMPCP 403
Query: 536 GQCVSFIFNLAMKCTVESPEQR 557
+C + +L +C + PE+R
Sbjct: 404 PECPESLHDLMCQCWRKEPEER 425
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 32/262 (12%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G+G FG V+ VA+K L+ G ++
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 360 DDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
++ +V EYM GSL L L + Q +++ +AS + Y+ + +H DL
Sbjct: 75 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 131
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAPEYGREGQVSTNGDV 477
+ +N+L+ +N+V ++DFG+A+ L ED T Q I + APE G+ + DV
Sbjct: 132 RAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHF--TTK 535
+SFGI+L E T+ + +P M V+ +L Q + +
Sbjct: 190 WSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRMPCP 228
Query: 536 GQCVSFIFNLAMKCTVESPEQR 557
+C + +L +C + PE+R
Sbjct: 229 PECPESLHDLMCQCWRKDPEER 250
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 32/262 (12%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G+G FG V+ VA+K L+ G ++
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 360 DDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
++ +V EYM GSL L L + Q +++ +AS + Y+ + +H DL
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 129
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAPEYGREGQVSTNGDV 477
+ +N+L+ +N+V ++DFG+A+ L ED T Q I + APE G+ + DV
Sbjct: 130 RAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 187
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHF--TTK 535
+SFGI+L E T+ + +P M V+ +L Q + +
Sbjct: 188 WSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRMPCP 226
Query: 536 GQCVSFIFNLAMKCTVESPEQR 557
+C + +L +C + PE+R
Sbjct: 227 PECPESLHDLMCQCWRKDPEER 248
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 32/262 (12%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G+G FG V+ VA+K L+ G ++
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 360 DDFKALVLEYMPHGSLEKCLY-SSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
++ +V EYM GSL L + L + Q +++ +AS + Y+ + +H DL
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDL 137
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAPEYGREGQVSTNGDV 477
+ +N+L+ +N+V ++DFG+A+ L ED T Q I + APE G+ + DV
Sbjct: 138 RAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHF--TTK 535
+SFGI+L E T+ + +P M V+ +L Q + +
Sbjct: 196 WSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRMPCP 234
Query: 536 GQCVSFIFNLAMKCTVESPEQR 557
+C + +L +C + PE+R
Sbjct: 235 PECPESLHDLMCQCWRKEPEER 256
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 32/262 (12%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G+G FG V+ VA+K L+ G ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 360 DDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
++ +V EYM GSL L L + Q +++ +AS + Y+ + +H DL
Sbjct: 84 EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAPEYGREGQVSTNGDV 477
+ +N+L+ +N+V ++DFG+A+ L ED T Q I + APE G+ + DV
Sbjct: 141 RAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHF--TTK 535
+SFGI+L E T+ + +P M V+ +L Q + +
Sbjct: 199 WSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRMPCP 237
Query: 536 GQCVSFIFNLAMKCTVESPEQR 557
+C + +L +C + PE+R
Sbjct: 238 PECPESLHDLMCQCWRKDPEER 259
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 32/262 (12%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G+G FG V+ VA+K L+ G ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 360 DDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
++ +V EYM GSL L L + Q +++ +AS + Y+ + +H DL
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAPEYGREGQVSTNGDV 477
+ +N+L+ +N+V ++DFG+A+ L ED T Q I + APE G+ + DV
Sbjct: 141 RAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHF--TTK 535
+SFGI+L E T+ + +P M V+ +L Q + +
Sbjct: 199 WSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRMPCP 237
Query: 536 GQCVSFIFNLAMKCTVESPEQR 557
+C + +L +C + PE+R
Sbjct: 238 PECPESLHDLMCQCWRKDPEER 259
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 32/262 (12%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G+G FG V+ VA+K L+ G ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 360 DDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
++ +V EYM GSL L L + Q +++ +AS + Y+ + +H DL
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAPEYGREGQVSTNGDV 477
+ +N+L+ +N+V ++DFG+A+ L ED T Q I + APE G+ + DV
Sbjct: 141 RAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHF--TTK 535
+SFGI+L E T+ + +P M V+ +L Q + +
Sbjct: 199 WSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRMPCP 237
Query: 536 GQCVSFIFNLAMKCTVESPEQR 557
+C + +L +C + PE+R
Sbjct: 238 PECPESLHDLMCQCWRKDPEER 259
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
++ EYM +G L L + Q L + DV A+EYL S +H DL N L
Sbjct: 96 IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCL 152
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
++D V +SDFG+++ +L +D+ + + + + PE + S+ D+++FG+++
Sbjct: 153 VNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 211
Query: 485 METFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFN 544
E ++ K E F T +H L + +L S+K ++
Sbjct: 212 WEIYSLGKMPYERFTNSETAEHIAQGL------RLYRPHLASEK-------------VYT 252
Query: 545 LAMKCTVESPEQRINAKEIVTRLLKIRD 572
+ C E ++R K +++ +L + D
Sbjct: 253 IMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 32/262 (12%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G+G FG V+ VA+K L+ G ++
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 360 DDFKALVLEYMPHGSLEKCLY-SSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
++ +V EYM GSL L + L + Q +++ +AS + Y+ + +H DL
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 306
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAPEYGREGQVSTNGDV 477
+ +N+L+ +N+V ++DFG+A+ L ED T Q I + APE G+ + DV
Sbjct: 307 RAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFT--TK 535
+SFGI+L E T+ + +P M V+ +L Q + +
Sbjct: 365 WSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRMPCP 403
Query: 536 GQCVSFIFNLAMKCTVESPEQR 557
+C + +L +C + PE+R
Sbjct: 404 PECPESLHDLMCQCWRKEPEER 425
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
++ EYM +G L L + Q L + DV A+EYL S +H DL N L
Sbjct: 81 IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCL 137
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
++D V +SDFG+++ +L +D+ + + + + PE + S+ D+++FG+++
Sbjct: 138 VNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 196
Query: 485 METFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFN 544
E ++ K E F T +H L + +L S+K ++
Sbjct: 197 WEIYSLGKMPYERFTNSETAEHIAQGL------RLYRPHLASEK-------------VYT 237
Query: 545 LAMKCTVESPEQRINAKEIVTRLLKIRD 572
+ C E ++R K +++ +L + D
Sbjct: 238 IMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
++ EYM +G L L + Q L + DV A+EYL S +H DL N L
Sbjct: 80 IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCL 136
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
++D V +SDFG+++ +L +D+ + + + + PE + S+ D+++FG+++
Sbjct: 137 VNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 195
Query: 485 METFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFN 544
E ++ K E F T +H L + +L S+K ++
Sbjct: 196 WEIYSLGKMPYERFTNSETAEHIAQGL------RLYRPHLASEK-------------VYT 236
Query: 545 LAMKCTVESPEQRINAKEIVTRLLKIRD 572
+ C E ++R K +++ +L + D
Sbjct: 237 IMYSCWHEKADERPTFKILLSNILDVMD 264
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
++ EYM +G L L + Q L + DV A+EYL S +H DL N L
Sbjct: 87 IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCL 143
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
++D V +SDFG+++ +L +D+ + + + + PE + S+ D+++FG+++
Sbjct: 144 VNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 202
Query: 485 METFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFN 544
E ++ K E F T +H L + +L S+K ++
Sbjct: 203 WEIYSLGKMPYERFTNSETAEHIAQGL------RLYRPHLASEK-------------VYT 243
Query: 545 LAMKCTVESPEQRINAKEIVTRLLKIRD 572
+ C E ++R K +++ +L + D
Sbjct: 244 IMYSCWHEKADERPTFKILLSNILDVMD 271
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 131/297 (44%), Gaps = 39/297 (13%)
Query: 290 ATNGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFDLQYG-RAFKSFDIECDMXXX 344
ATN S + ++G G FG V R++ + VA+K + Y + + F E +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 345 XXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEY 404
+V E M +GSL+ L + + Q + ++ +AS ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 405 LH-FGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ-TLATIGYMA 462
L GY +H DL N+L++ N+V +SDFG+++ L + ++ T+ I + +
Sbjct: 163 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 463 PEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDA 522
PE + ++ DV+S+GI+L E + +G+ +W E+ +
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS---------YGER--PYW----------EMSNQ 257
Query: 523 NLLSQKDEHFTTKG--QCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLKN 577
+++ DE + C + ++ L + C + R ++IV+ I D L++N
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 310
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 111/262 (42%), Gaps = 32/262 (12%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G+G FG V+ VA+K L+ G ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 360 DDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
++ +V+EYM G L L L + Q +++ +AS + Y+ + +H DL
Sbjct: 84 EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAPEYGREGQVSTNGDV 477
+ +N+L+ +N+V ++DFG+A+ L ED T Q I + APE G+ + DV
Sbjct: 141 RAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHF--TTK 535
+SFGI+L E T+ + +P M V+ +L Q + +
Sbjct: 199 WSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRMPCP 237
Query: 536 GQCVSFIFNLAMKCTVESPEQR 557
+C + +L +C + PE+R
Sbjct: 238 PECPESLHDLMCQCWRKDPEER 259
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
++ EYM +G L L + Q L + DV A+EYL S +H DL N L
Sbjct: 81 IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCL 137
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
++D V +SDFG+++ +L +D+ + + + + PE + S+ D+++FG+++
Sbjct: 138 VNDQGVVKVSDFGLSRYVL-DDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 196
Query: 485 METFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFN 544
E ++ K E F T +H L + +L S+K ++
Sbjct: 197 WEIYSLGKMPYERFTNSETAEHIAQGL------RLYRPHLASEK-------------VYT 237
Query: 545 LAMKCTVESPEQRINAKEIVTRLLKIRD 572
+ C E ++R K +++ +L + D
Sbjct: 238 IMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
++ EYM +G L L + Q L + DV A+EYL S +H DL N L
Sbjct: 76 IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCL 132
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
++D V +SDFG+++ +L +D+ + + + + PE + S+ D+++FG+++
Sbjct: 133 VNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 191
Query: 485 METFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFN 544
E ++ K E F T +H L + +L S+K ++
Sbjct: 192 WEIYSLGKMPYERFTNSETAEHIAQGL------RLYRPHLASEK-------------VYT 232
Query: 545 LAMKCTVESPEQRINAKEIVTRLLKIRD 572
+ C E ++R K +++ +L + D
Sbjct: 233 IMYSCWHEKADERPTFKILLSNILDVMD 260
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 118/294 (40%), Gaps = 33/294 (11%)
Query: 284 YLEIFQATNGFSENNLIGRGGFGSVYKA---RIQDGMEVAVKVFDLQYGRAFKSF-DIEC 339
Y + F++ IG+G FG V+K R Q VA+K+ DL+ E
Sbjct: 19 YFQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQK--VVAIKIIDLEEAEDEIEDIQQEI 76
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVA 399
+ D +++EY+ GS L LD Q I+ ++
Sbjct: 77 TVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREIL 134
Query: 400 SALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG 459
L+YLH S IH D+K +NVLL ++ L+DFG+A L D + + + T
Sbjct: 135 KGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPF 189
Query: 460 YMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEI 519
+MAPE ++ + D++S GI +E + P E L P+ V+
Sbjct: 190 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE--------------LHPMKVL-- 233
Query: 520 VDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDS 573
L K+ T +G + C + P R AKE++ +R++
Sbjct: 234 ----FLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNA 283
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 136/313 (43%), Gaps = 47/313 (15%)
Query: 283 TYLEIFQATNGFSEN---------NLIGRGGFGSVYKARIQ----DGMEVAVKVFDLQYG 329
TY + QA + F++ +IG G FG V R++ + VA+K + Y
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 330 -RAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDI 388
+ + F E + +V EYM +GSL+ L ++ +
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV 123
Query: 389 FQRLNIMIDVASALEYLH-FGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447
Q + ++ +++ ++YL GY +H DL N+L++ N+V +SDFG+++ L + +
Sbjct: 124 IQLVGMLRGISAGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 179
Query: 448 SLTQTQ-TLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKH 506
+ T+ I + APE + ++ DV+S+GI++ E + +G+ +
Sbjct: 180 AAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS---------YGERP--Y 228
Query: 507 WVNDLLPISVMEIVDANLLSQKDEHFT--TKGQCVSFIFNLAMKCTVESPEQRINAKEIV 564
W E+ + +++ +E + + C + ++ L + C + R EIV
Sbjct: 229 W----------EMTNQDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIV 278
Query: 565 TRLLKIRDSLLKN 577
L D L++N
Sbjct: 279 NML----DKLIRN 287
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 116/284 (40%), Gaps = 33/284 (11%)
Query: 294 FSENNLIGRGGFGSVYKA---RIQDGMEVAVKVFDLQYGRAFKSF-DIECDMXXXXXXXX 349
F++ IG+G FG V+K R Q VA+K+ DL+ E +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQK--VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 350 XXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 409
D +++EY+ GS L LD Q I+ ++ L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH--- 121
Query: 410 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG 469
S IH D+K +NVLL ++ L+DFG+A L D + + + T +MAPE ++
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQS 179
Query: 470 QVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKD 529
+ D++S GI +E + P E L P+ V+ L K+
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHSE--------------LHPMKVL------FLIPKN 219
Query: 530 EHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDS 573
T +G + C + P R AKE++ +R++
Sbjct: 220 NPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNA 263
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 125/299 (41%), Gaps = 39/299 (13%)
Query: 276 ISNQRRFTYLEIFQATNGFSENNLIGRGGFGSVYKARI--QDG--MEVAVKVF--DLQYG 329
IS++ + ++ F+ ++G+G FGSV +A++ +DG ++VAVK+ D+
Sbjct: 7 ISDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS 66
Query: 330 RAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKA------LVLEYMPHGSLEKCLYSSN 383
+ F E K ++L +M HG L L +S
Sbjct: 67 SDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASR 126
Query: 384 -----YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGM 438
+ L + + M+D+A +EYL S IH DL N +L ++M ++DFG+
Sbjct: 127 IGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGL 183
Query: 439 AKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIF 498
++ + D + + ++A E + + + DV++FG+ + E TR +
Sbjct: 184 SRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP---- 239
Query: 499 FGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQR 557
+ + N L + N L Q E C+ +++L +C P+QR
Sbjct: 240 YAGIENAEIYNYL--------IGGNRLKQPPE-------CMEEVYDLMYQCWSADPKQR 283
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 110/262 (41%), Gaps = 32/262 (12%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G+G FG V+ VA+K L+ G ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 360 DDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
++ +V EYM GSL L L + Q +++ +AS + Y+ + +H DL
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAPEYGREGQVSTNGDV 477
+N+L+ +N+V ++DFG+A+ L ED T Q I + APE G+ + DV
Sbjct: 141 AAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHF--TTK 535
+SFGI+L E T+ + +P M V+ +L Q + +
Sbjct: 199 WSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRMPCP 237
Query: 536 GQCVSFIFNLAMKCTVESPEQR 557
+C + +L +C + PE+R
Sbjct: 238 PECPESLHDLMCQCWRKDPEER 259
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 116/284 (40%), Gaps = 33/284 (11%)
Query: 294 FSENNLIGRGGFGSVYKA---RIQDGMEVAVKVFDLQYGRAFKSF-DIECDMXXXXXXXX 349
F++ IG+G FG V+K R Q VA+K+ DL+ E +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQK--VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 350 XXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 409
D +++EY+ GS L LD Q I+ ++ L+YLH
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH--- 136
Query: 410 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG 469
S IH D+K +NVLL ++ L+DFG+A L D + + + T +MAPE ++
Sbjct: 137 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQS 194
Query: 470 QVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKD 529
+ D++S GI +E + P E L P+ V+ L K+
Sbjct: 195 AYDSKADIWSLGITAIELARGEPPHSE--------------LHPMKVL------FLIPKN 234
Query: 530 EHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDS 573
T +G + C + P R AKE++ +R++
Sbjct: 235 NPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNA 278
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 116/284 (40%), Gaps = 33/284 (11%)
Query: 294 FSENNLIGRGGFGSVYKA---RIQDGMEVAVKVFDLQYGRAFKSF-DIECDMXXXXXXXX 349
F++ IG+G FG V+K R Q VA+K+ DL+ E +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQK--VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 350 XXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 409
D +++EY+ GS L LD Q I+ ++ L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH--- 121
Query: 410 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG 469
S IH D+K +NVLL ++ L+DFG+A L D + + + T +MAPE ++
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVIKQS 179
Query: 470 QVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKD 529
+ D++S GI +E + P E L P+ V+ L K+
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHSE--------------LHPMKVL------FLIPKN 219
Query: 530 EHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDS 573
T +G + C + P R AKE++ +R++
Sbjct: 220 NPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNA 263
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 32/262 (12%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G+G FG V+ VA+K L+ G ++
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 360 DDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
++ +V EYM GSL L L + Q +++ +AS + Y+ + +H DL
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 307
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAPEYGREGQVSTNGDV 477
+ +N+L+ +N+V ++DFG+ + L ED T Q I + APE G+ + DV
Sbjct: 308 RAANILVGENLVCKVADFGLGR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 365
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFT--TK 535
+SFGI+L E T+ + +P M V+ +L Q + +
Sbjct: 366 WSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRMPCP 404
Query: 536 GQCVSFIFNLAMKCTVESPEQR 557
+C + +L +C + PE+R
Sbjct: 405 PECPESLHDLMCQCWRKDPEER 426
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 300 IGRGGFGSVYKAR-IQDGMEVA---VKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXX 355
IGRG F VY+A + DG+ VA V++FDL +A E D+
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 356 XXXXDDFKALVLEYMPHGSLE---KCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 412
D+ +VLE G L K ++ + + SALE++H S
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRR 156
Query: 413 IIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVS 472
++H D+KP+NV + V L D G+ + ++ + T YM+PE E +
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGR--FFSSKTTAAHSLVGTPYYMSPERIHENGYN 214
Query: 473 TNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
D++S G +L E + P F+GD
Sbjct: 215 FKSDIWSLGCLLYEMAALQSP----FYGD 239
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 114/290 (39%), Gaps = 44/290 (15%)
Query: 300 IGRGGFGSVYKARI------QDGMEVAVKVF-DLQYGRAFKSFDIECDMXXXXXXXXXXX 352
+G FG VYK + + VA+K D G + F E +
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 353 XXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQR---------------LNIMID 397
D +++ Y HG L + L + D+ ++++
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
+A+ +EYL S ++H DL NVL+ D + +SD G+ + + D +L
Sbjct: 137 IAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 458 IGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVM 517
I +MAPE G+ S + D++S+G++L E F+ +G L P
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS---------YG----------LQPYCGY 234
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
D + + + C ++++ L ++C E P +R K+I +RL
Sbjct: 235 SNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 284
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 102/217 (47%), Gaps = 31/217 (14%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
++ E+M +GSL+ L ++ + Q + ++ +A+ ++YL + +H DL N+L
Sbjct: 111 IITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNIL 167
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA---TIGYMAPEYGREGQVSTNGDVYSFG 481
++ N+V +SDFG+++ L + T T L I + APE + + ++ DV+S+G
Sbjct: 168 VNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYG 227
Query: 482 IMLMETFTR-KKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVS 540
I++ E + ++P + DMT + +N + ++D C S
Sbjct: 228 IVMWEVMSYGERP-----YWDMTNQDVINAI---------------EQDYRLPPPMDCPS 267
Query: 541 FIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLKN 577
+ L + C + R +IV L D +++N
Sbjct: 268 ALHQLMLDCWQKDRNHRPKFGQIVNTL----DKMIRN 300
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 32/262 (12%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G+G FG V+ VA+K L+ G ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 360 DDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
++ +V EYM G L L L + Q +++ +AS + Y+ + +H DL
Sbjct: 84 EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAPEYGREGQVSTNGDV 477
+ +N+L+ +N+V ++DFG+A+ L ED T Q I + APE G+ + DV
Sbjct: 141 RAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHF--TTK 535
+SFGI+L E T+ + +P M V+ +L Q + +
Sbjct: 199 WSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRMPCP 237
Query: 536 GQCVSFIFNLAMKCTVESPEQR 557
+C + +L +C + PE+R
Sbjct: 238 PECPESLHDLMCQCWRKDPEER 259
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 130/296 (43%), Gaps = 37/296 (12%)
Query: 290 ATNGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFDLQYG-RAFKSFDIECDMXXX 344
ATN S + ++G G FG V R++ + VA+K + Y + + F E +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 345 XXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEY 404
+V E M +GSL+ L + + Q + ++ +AS ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 405 LHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ-TLATIGYMAP 463
L + +H DL N+L++ N+V +SDFG+++ L + ++ T+ I + +P
Sbjct: 163 LS---DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 464 EYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDAN 523
E + ++ DV+S+GI+L E + +G+ +W E+ + +
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMS---------YGER--PYW----------EMSNQD 258
Query: 524 LLSQKDEHFTTKG--QCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLKN 577
++ DE + C + ++ L + C + R ++IV+ I D L++N
Sbjct: 259 VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 310
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 90/218 (41%), Gaps = 19/218 (8%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQ-------YGRAFKSFDIE 338
I + F NL+G+G F VY+A I G+EVA+K+ D + R I
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
C + ++ LVLE +G + + L + + + M +
Sbjct: 66 CQLKHPSILELYNYFED----SNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQI 121
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQTLAT 457
+ + YLH S I+H DL SN+LL NM ++DFG+A L + ++ T T
Sbjct: 122 ITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT---LCGT 175
Query: 458 IGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTD 495
Y++PE DV+S G M + P D
Sbjct: 176 PNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 108/259 (41%), Gaps = 26/259 (10%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G G FG V+ +VAVK Q + +F E ++
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 360 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 89 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 144
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
+ +N+L+ D + ++DFG+A+ L+++++ + I + APE G + DV+
Sbjct: 145 RAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 203
Query: 479 SFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQC 538
SFGI+L E T + I + MT + +L ++ C
Sbjct: 204 SFGILLTEIVTHGR----IPYPGMTNPEVIQNL---------------ERGYRMVRPDNC 244
Query: 539 VSFIFNLAMKCTVESPEQR 557
++ L C E PE R
Sbjct: 245 PEELYQLMRLCWKERPEDR 263
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 108/259 (41%), Gaps = 26/259 (10%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G G FG V+ +VAVK Q + +F E ++
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 360 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
+ +N+L+ D + ++DFG+A+ L+++++ + I + APE G + DV+
Sbjct: 136 RAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 479 SFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQC 538
SFGI+L E T + I + MT + +L ++ C
Sbjct: 195 SFGILLTEIVTHGR----IPYPGMTNPEVIQNL---------------ERGYRMVRPDNC 235
Query: 539 VSFIFNLAMKCTVESPEQR 557
++ L C E PE R
Sbjct: 236 PEELYQLMRLCWKERPEDR 254
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 108/259 (41%), Gaps = 26/259 (10%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G G FG V+ +VAVK Q + +F E ++
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 360 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 82 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 137
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
+ +N+L+ D + ++DFG+A+ L+++++ + I + APE G + DV+
Sbjct: 138 RAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 196
Query: 479 SFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQC 538
SFGI+L E T + I + MT + +L ++ C
Sbjct: 197 SFGILLTEIVTHGR----IPYPGMTNPEVIQNL---------------ERGYRMVRPDNC 237
Query: 539 VSFIFNLAMKCTVESPEQR 557
++ L C E PE R
Sbjct: 238 PEELYQLMRLCWKERPEDR 256
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 15/207 (7%)
Query: 297 NNLIGRGGFGSVYKA--------RIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXX 348
+ +IG+G FG VY RIQ ++ ++ ++Q AF + M
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLL--MRGLNHPN 83
Query: 349 XXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFG 408
+ ++L YM HG L + + S + ++ + VA +EYL
Sbjct: 84 VLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL--- 140
Query: 409 YSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA--TIGYMAPEYG 466
+H DL N +LD++ ++DFG+A+ +L + Q A + + A E
Sbjct: 141 AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL 200
Query: 467 REGQVSTNGDVYSFGIMLMETFTRKKP 493
+ + +T DV+SFG++L E TR P
Sbjct: 201 QTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 108/259 (41%), Gaps = 26/259 (10%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G G FG V+ +VAVK Q + +F E ++
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 360 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
+ +N+L+ D + ++DFG+A+ L+++++ + I + APE G + DV+
Sbjct: 136 RAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 479 SFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQC 538
SFGI+L E T + I + MT + +L ++ C
Sbjct: 195 SFGILLTEIVTHGR----IPYPGMTNPEVIQNL---------------ERGYRMVRPDNC 235
Query: 539 VSFIFNLAMKCTVESPEQR 557
++ L C E PE R
Sbjct: 236 PEELYQLMRLCWKERPEDR 254
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 96/201 (47%), Gaps = 13/201 (6%)
Query: 297 NNLIGRGGFGSVYKARIQ--DGMEVAVKVFDLQYG---RAFKSFDIECDMXXXXXXXXXX 351
+IG G FG V R++ +VAV + L+ G + + F E +
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 352 XXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLH-FGYS 410
+V+E+M +G+L+ L + + Q + ++ +A+ + YL GY
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGY- 166
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI--GYMAPEYGRE 468
+H DL N+L++ N+V +SDFG+++ ++++D T T I + APE +
Sbjct: 167 ---VHRDLAARNILVNSNLVCKVSDFGLSR-VIEDDPEAVYTTTGGKIPVRWTAPEAIQY 222
Query: 469 GQVSTNGDVYSFGIMLMETFT 489
+ ++ DV+S+GI++ E +
Sbjct: 223 RKFTSASDVWSYGIVMWEVMS 243
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 108/259 (41%), Gaps = 26/259 (10%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G G FG V+ +VAVK Q + +F E ++
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 360 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 81 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 136
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
+ +N+L+ D + ++DFG+A+ L+++++ + I + APE G + DV+
Sbjct: 137 RAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 195
Query: 479 SFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQC 538
SFGI+L E T + I + MT + +L ++ C
Sbjct: 196 SFGILLTEIVTHGR----IPYPGMTNPEVIQNL---------------ERGYRMVRPDNC 236
Query: 539 VSFIFNLAMKCTVESPEQR 557
++ L C E PE R
Sbjct: 237 PEELYQLMRLCWKERPEDR 255
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 108/259 (41%), Gaps = 26/259 (10%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G G FG V+ +VAVK Q + +F E ++
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 360 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 141
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
+ +N+L+ D + ++DFG+A+ L+++++ + I + APE G + DV+
Sbjct: 142 RAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 200
Query: 479 SFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQC 538
SFGI+L E T + I + MT + +L ++ C
Sbjct: 201 SFGILLTEIVTHGR----IPYPGMTNPEVIQNL---------------ERGYRMVRPDNC 241
Query: 539 VSFIFNLAMKCTVESPEQR 557
++ L C E PE R
Sbjct: 242 PEELYQLMRLCWKERPEDR 260
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 108/259 (41%), Gaps = 26/259 (10%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G G FG V+ +VAVK Q + +F E ++
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 360 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 88 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 143
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
+ +N+L+ D + ++DFG+A+ L+++++ + I + APE G + DV+
Sbjct: 144 RAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 202
Query: 479 SFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQC 538
SFGI+L E T + I + MT + +L ++ C
Sbjct: 203 SFGILLTEIVTHGR----IPYPGMTNPEVIQNL---------------ERGYRMVRPDNC 243
Query: 539 VSFIFNLAMKCTVESPEQR 557
++ L C E PE R
Sbjct: 244 PEELYQLMRLCWKERPEDR 262
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 101/223 (45%), Gaps = 18/223 (8%)
Query: 282 FTYLEIFQATNGFSEN---------NLIGRGGFGSVYKARIQ--DGMEVAVKVFDLQYG- 329
FT+ + QA F++ +IG G FG V R++ E+ V + L+ G
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 330 --RAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILD 387
+ + F E + ++ EYM +GSL+ L ++
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 129
Query: 388 IFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447
+ Q + ++ + S ++YL + +H DL N+L++ N+V +SDFGM++ L + +
Sbjct: 130 VIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE 186
Query: 448 SLTQTQ-TLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT 489
+ T+ I + APE + ++ DV+S+GI++ E +
Sbjct: 187 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
++ SALEYLH IIH DLKP N+LL+++M ++DFG AK L E + +
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 196
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLME 486
T Y++PE E S + D+++ G ++ +
Sbjct: 197 TAQYVSPELLTEKSASKSSDLWALGCIIYQ 226
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 108/259 (41%), Gaps = 26/259 (10%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G G FG V+ +VAVK Q + +F E ++
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 360 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 75 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 130
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
+ +N+L+ D + ++DFG+A+ L+++++ + I + APE G + DV+
Sbjct: 131 RAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 189
Query: 479 SFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQC 538
SFGI+L E T + I + MT + +L ++ C
Sbjct: 190 SFGILLTEIVTHGR----IPYPGMTNPEVIQNL---------------ERGYRMVRPDNC 230
Query: 539 VSFIFNLAMKCTVESPEQR 557
++ L C E PE R
Sbjct: 231 PEELYQLMRLCWKERPEDR 249
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 108/259 (41%), Gaps = 26/259 (10%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G G FG V+ +VAVK Q + +F E ++
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 360 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 141
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
+ +N+L+ D + ++DFG+A+ L+++++ + I + APE G + DV+
Sbjct: 142 RAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 200
Query: 479 SFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQC 538
SFGI+L E T + I + MT + +L ++ C
Sbjct: 201 SFGILLTEIVTHGR----IPYPGMTNPEVIQNL---------------ERGYRMVRPDNC 241
Query: 539 VSFIFNLAMKCTVESPEQR 557
++ L C E PE R
Sbjct: 242 PEELYQLMRLCWKERPEDR 260
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 28/214 (13%)
Query: 297 NNLIGRGGFGSVYKARIQ-DG--MEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXX 353
++IG G FG V KARI+ DG M+ A+K +Y D ++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 354 XXXXXXDDFKA---LVLEYMPHGSLEKCLYSSNYI---------------LDIFQRLNIM 395
+ + L +EY PHG+L L S + L Q L+
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 396 IDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTL 455
DVA ++YL IH DL N+L+ +N VA ++DFG+++ ++ + +T
Sbjct: 149 ADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 202
Query: 456 ATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT 489
+ +MA E +TN DV+S+G++L E +
Sbjct: 203 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 108/259 (41%), Gaps = 26/259 (10%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G G FG V+ +VAVK Q + +F E ++
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 360 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
+ +N+L+ D + ++DFG+A+ L+++++ + I + APE G + DV+
Sbjct: 136 RAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 479 SFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQC 538
SFGI+L E T + I + MT + +L ++ C
Sbjct: 195 SFGILLTEIVTHGR----IPYPGMTNPEVIQNL---------------ERGYRMVRPDNC 235
Query: 539 VSFIFNLAMKCTVESPEQR 557
++ L C E PE R
Sbjct: 236 PEELYQLMRLCWKERPEDR 254
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 108/259 (41%), Gaps = 26/259 (10%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G G FG V+ +VAVK Q + +F E ++
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 360 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 85 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 140
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
+ +N+L+ D + ++DFG+A+ L+++++ + I + APE G + DV+
Sbjct: 141 RAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 199
Query: 479 SFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQC 538
SFGI+L E T + I + MT + +L ++ C
Sbjct: 200 SFGILLTEIVTHGR----IPYPGMTNPEVIQNL---------------ERGYRMVRPDNC 240
Query: 539 VSFIFNLAMKCTVESPEQR 557
++ L C E PE R
Sbjct: 241 PEELYQLMRLCWKERPEDR 259
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 108/259 (41%), Gaps = 26/259 (10%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G G FG V+ A +VAVK + ++F E ++
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 360 DDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASAL-EYLHFGYSVPIIHCDL 418
+ ++ E+M GSL L S Q L +ID ++ + E + F IH DL
Sbjct: 82 EPI-YIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 137
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
+ +N+L+ ++V ++DFG+A+ ++++++ + I + APE G + DV+
Sbjct: 138 RAANILVSASLVCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 196
Query: 479 SFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQC 538
SFGI+LME T + +P M + ++ C
Sbjct: 197 SFGILLMEIVTYGR-------------------IPYPGMSNPEVIRALERGYRMPRPENC 237
Query: 539 VSFIFNLAMKCTVESPEQR 557
++N+ M+C PE+R
Sbjct: 238 PEELYNIMMRCWKNRPEER 256
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 28/214 (13%)
Query: 297 NNLIGRGGFGSVYKARIQ-DG--MEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXX 353
++IG G FG V KARI+ DG M+ A+K +Y D ++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 354 XXXXXXDDFKA---LVLEYMPHGSLEKCLYSSNYI---------------LDIFQRLNIM 395
+ + L +EY PHG+L L S + L Q L+
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 396 IDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTL 455
DVA ++YL IH DL N+L+ +N VA ++DFG+++ ++ + +T
Sbjct: 139 ADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 192
Query: 456 ATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT 489
+ +MA E +TN DV+S+G++L E +
Sbjct: 193 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 108/259 (41%), Gaps = 26/259 (10%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G G FG V+ +VAVK Q + +F E ++
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 360 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 90 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 145
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
+ +N+L+ D + ++DFG+A+ L+++++ + I + APE G + DV+
Sbjct: 146 RAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 204
Query: 479 SFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQC 538
SFGI+L E T + I + MT + +L ++ C
Sbjct: 205 SFGILLTEIVTHGR----IPYPGMTNPEVIQNL---------------ERGYRMVRPDNC 245
Query: 539 VSFIFNLAMKCTVESPEQR 557
++ L C E PE R
Sbjct: 246 PEELYQLMRLCWKERPEDR 264
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
LV+EY+P G L L LD + L + +EYL S +H DL N+L
Sbjct: 87 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNIL 143
Query: 425 LDDNMVAHLSDFGMAKPL-LKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
++ ++DFG+AK L L +D + + + I + APE + S DV+SFG++
Sbjct: 144 VESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 203
Query: 484 LMETFT 489
L E FT
Sbjct: 204 LYELFT 209
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 91/218 (41%), Gaps = 19/218 (8%)
Query: 289 QATNGFSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYG---RAFKSFDIEC----D 340
Q + +G GGFG V + QD G +VA+K + R +I+ +
Sbjct: 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN 70
Query: 341 MXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQR--LNIMIDV 398
+D L +EY G L K L + + ++ D+
Sbjct: 71 HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 130
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLD---DNMVAHLSDFGMAKPLLKEDQSLTQTQTL 455
+SAL YLH IIH DLKP N++L ++ + D G AK L DQ T+ +
Sbjct: 131 SSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFV 184
Query: 456 ATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
T+ Y+APE + + + D +SFG + E T +P
Sbjct: 185 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 91/218 (41%), Gaps = 19/218 (8%)
Query: 289 QATNGFSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYG---RAFKSFDIEC----D 340
Q + +G GGFG V + QD G +VA+K + R +I+ +
Sbjct: 12 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN 71
Query: 341 MXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQR--LNIMIDV 398
+D L +EY G L K L + + ++ D+
Sbjct: 72 HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 131
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLD---DNMVAHLSDFGMAKPLLKEDQSLTQTQTL 455
+SAL YLH IIH DLKP N++L ++ + D G AK L DQ T+ +
Sbjct: 132 SSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFV 185
Query: 456 ATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
T+ Y+APE + + + D +SFG + E T +P
Sbjct: 186 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 115/284 (40%), Gaps = 33/284 (11%)
Query: 294 FSENNLIGRGGFGSVYKA---RIQDGMEVAVKVFDLQYGRAFKSF-DIECDMXXXXXXXX 349
F++ IG+G FG V+K R Q VA+K+ DL+ E +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQ--QVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 350 XXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 409
+++EY+ GS L + + D FQ ++ ++ L+YLH
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPF--DEFQIATMLKEILKGLDYLH--- 137
Query: 410 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG 469
S IH D+K +NVLL + L+DFG+A L D + + + T +MAPE ++
Sbjct: 138 SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVIQQS 195
Query: 470 QVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKD 529
+ D++S GI +E + P +D+ P+ V+ L K+
Sbjct: 196 AYDSKADIWSLGITAIELAKGEPPN--------------SDMHPMRVL------FLIPKN 235
Query: 530 EHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDS 573
T G C + P R AKE++ +++S
Sbjct: 236 NPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNS 279
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
++ EYM +GSL+ L ++ + Q + ++ + S ++YL + +H DL N+L
Sbjct: 92 IITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNIL 148
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQ-TLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
++ N+V +SDFGM++ L + ++ T+ I + APE + ++ DV+S+GI+
Sbjct: 149 VNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 208
Query: 484 LMETFT 489
+ E +
Sbjct: 209 MWEVMS 214
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
++ EYM +GSL+ L ++ + Q + ++ + S ++YL + +H DL N+L
Sbjct: 86 IITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNIL 142
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQ-TLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
++ N+V +SDFGM++ L + ++ T+ I + APE + ++ DV+S+GI+
Sbjct: 143 VNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 202
Query: 484 LMETFT 489
+ E +
Sbjct: 203 MWEVMS 208
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 7/194 (3%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G G FG V+ +VA+K L+ G +E
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKT--LKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 360 DDFKALVLEYMPHGSLEKCLY-SSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
++ +V EYM GSL L L + +++ VA+ + Y+ + IH DL
Sbjct: 75 EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDL 131
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
+ +N+L+ + ++ ++DFG+A+ L+++++ + I + APE G+ + DV+
Sbjct: 132 RSANILVGNGLICKIADFGLAR-LIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 479 SFGIMLMETFTRKK 492
SFGI+L E T+ +
Sbjct: 191 SFGILLTELVTKGR 204
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 8/197 (4%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQY---GRAFKSFDIECDMXXXXXXXX 349
F ++G G F +V AR + E A+K+ + ++ E D+
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 350 XXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 409
D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 127
Query: 410 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG 469
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++PE E
Sbjct: 128 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 187
Query: 470 QVSTNGDVYSFGIMLME 486
+ D+++ G ++ +
Sbjct: 188 SACKSSDLWALGCIIYQ 204
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 8/197 (4%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQY---GRAFKSFDIECDMXXXXXXXX 349
F ++G G F +V AR + E A+K+ + ++ E D+
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 350 XXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 409
D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 124
Query: 410 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG 469
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++PE E
Sbjct: 125 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 184
Query: 470 QVSTNGDVYSFGIMLME 486
+ D+++ G ++ +
Sbjct: 185 SACKSSDLWALGCIIYQ 201
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 100/234 (42%), Gaps = 22/234 (9%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKARIQD-GMEVAVKVFD-----LQYGRAFK-SFDI 337
L I N FS + +IGRGGFG VY R D G A+K D ++ G + I
Sbjct: 182 LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERI 241
Query: 338 ECDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMID 397
+ D + +L+ M G L L + R +
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAE 300
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
+ LE++H + +++ DLKP+N+LLD++ +SD G+A K+ ++ T
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH----ASVGT 353
Query: 458 IGYMAPEYGREG-QVSTNGDVYSFGIMLME------TFTRKKPTDEIFFGDMTL 504
GYMAPE ++G ++ D +S G ML + F + K D+ MTL
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 100/234 (42%), Gaps = 22/234 (9%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKARIQD-GMEVAVKVFD-----LQYGRAFK-SFDI 337
L I N FS + +IGRGGFG VY R D G A+K D ++ G + I
Sbjct: 182 LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERI 241
Query: 338 ECDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMID 397
+ D + +L+ M G L L + R +
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAE 300
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
+ LE++H + +++ DLKP+N+LLD++ +SD G+A K+ ++ T
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH----ASVGT 353
Query: 458 IGYMAPEYGREG-QVSTNGDVYSFGIMLME------TFTRKKPTDEIFFGDMTL 504
GYMAPE ++G ++ D +S G ML + F + K D+ MTL
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 8/197 (4%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQY---GRAFKSFDIECDMXXXXXXXX 349
F ++G G F +V AR + E A+K+ + ++ E D+
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 350 XXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 409
D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 126
Query: 410 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG 469
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++PE E
Sbjct: 127 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 186
Query: 470 QVSTNGDVYSFGIMLME 486
+ D+++ G ++ +
Sbjct: 187 SACKSSDLWALGCIIYQ 203
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 8/197 (4%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQY---GRAFKSFDIECDMXXXXXXXX 349
F ++G G F +V AR + E A+K+ + ++ E D+
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 350 XXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 409
D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 125
Query: 410 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG 469
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++PE E
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 185
Query: 470 QVSTNGDVYSFGIMLME 486
+ D+++ G ++ +
Sbjct: 186 SACKSSDLWALGCIIYQ 202
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 108/259 (41%), Gaps = 26/259 (10%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G G FG V+ +VAVK Q + +F E ++
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 360 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH +L
Sbjct: 76 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRNL 131
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
+ +N+L+ D + ++DFG+A+ L+++++ + I + APE G + DV+
Sbjct: 132 RAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 190
Query: 479 SFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQC 538
SFGI+L E T + I + MT + +L ++ C
Sbjct: 191 SFGILLTEIVTHGR----IPYPGMTNPEVIQNL---------------ERGYRMVRPDNC 231
Query: 539 VSFIFNLAMKCTVESPEQR 557
++ L C E PE R
Sbjct: 232 PEELYQLMRLCWKERPEDR 250
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 108/259 (41%), Gaps = 26/259 (10%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXX 359
+G G FG V+ A +VAVK + ++F E ++
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 254
Query: 360 DDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASAL-EYLHFGYSVPIIHCDL 418
+ ++ E+M GSL L S Q L +ID ++ + E + F IH DL
Sbjct: 255 EPI-YIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 310
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
+ +N+L+ ++V ++DFG+A+ ++++++ + I + APE G + DV+
Sbjct: 311 RAANILVSASLVCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 369
Query: 479 SFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQC 538
SFGI+LME T + +P M + ++ C
Sbjct: 370 SFGILLMEIVTYGR-------------------IPYPGMSNPEVIRALERGYRMPRPENC 410
Query: 539 VSFIFNLAMKCTVESPEQR 557
++N+ M+C PE+R
Sbjct: 411 PEELYNIMMRCWKNRPEER 429
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 100/234 (42%), Gaps = 22/234 (9%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKARIQD-GMEVAVKVFD-----LQYGRAFK-SFDI 337
L I N FS + +IGRGGFG VY R D G A+K D ++ G + I
Sbjct: 181 LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERI 240
Query: 338 ECDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMID 397
+ D + +L+ M G L L + R +
Sbjct: 241 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAE 299
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
+ LE++H + +++ DLKP+N+LLD++ +SD G+A K+ ++ T
Sbjct: 300 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGT 352
Query: 458 IGYMAPEYGREG-QVSTNGDVYSFGIMLME------TFTRKKPTDEIFFGDMTL 504
GYMAPE ++G ++ D +S G ML + F + K D+ MTL
Sbjct: 353 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 406
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 100/234 (42%), Gaps = 22/234 (9%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKARIQD-GMEVAVKVFD-----LQYGRAFK-SFDI 337
L I N FS + +IGRGGFG VY R D G A+K D ++ G + I
Sbjct: 182 LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERI 241
Query: 338 ECDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMID 397
+ D + +L+ M G L L + R +
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAE 300
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
+ LE++H + +++ DLKP+N+LLD++ +SD G+A K+ ++ T
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH----ASVGT 353
Query: 458 IGYMAPEYGREG-QVSTNGDVYSFGIMLME------TFTRKKPTDEIFFGDMTL 504
GYMAPE ++G ++ D +S G ML + F + K D+ MTL
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 97/222 (43%), Gaps = 40/222 (18%)
Query: 299 LIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXX 358
LIGRG +G+VYK + D VAVKVF + F + E ++
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFIN---EKNIYRVPLMEHDNIARFIVG 75
Query: 359 XDDFKA-------LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF---- 407
+ A LV+EY P+GSL K Y S + D + V L YLH
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXK--YLSLHTSDWVSSCRLAHSVTRGLAYLHTELPR 133
Query: 408 --GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMA---------KPLLKEDQSLTQTQTLA 456
Y I H DL NVL+ ++ +SDFG++ +P +++ ++++ +
Sbjct: 134 GDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE---VG 190
Query: 457 TIGYMAPEYGREGQVSTNG--------DVYSFGIMLMETFTR 490
TI YMAPE EG V+ D+Y+ G++ E F R
Sbjct: 191 TIRYMAPEV-LEGAVNLRDXESALKQVDMYALGLIYWEIFMR 231
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 125/287 (43%), Gaps = 34/287 (11%)
Query: 299 LIGRGGFGSVYKARIQDGME----VAVKVFDLQYG-RAFKSFDIECDMXXXXXXXXXXXX 353
+IG G FG V + R++ + VA+K Y R + F E +
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 354 XXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPI 413
++ E+M +G+L+ L ++ + Q + ++ +AS + YL +
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA---EMSY 139
Query: 414 IHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA---TIGYMAPEYGREGQ 470
+H DL N+L++ N+V +SDFG+++ L + T+T +L I + APE +
Sbjct: 140 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRK 199
Query: 471 VSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDE 530
++ D +S+GI++ E + FG+ +W +S ++++A ++D
Sbjct: 200 FTSASDAWSYGIVMWEVMS---------FGERP--YW-----DMSNQDVINA---IEQDY 240
Query: 531 HFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLKN 577
C + + L + C + R ++V+ L D +++N
Sbjct: 241 RLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSAL----DKMIRN 283
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
++ SALEYLH IIH DLKP N+LL+++M ++DFG AK L E + +
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 193
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLME 486
T Y++PE E + D+++ G ++ +
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQ 223
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 8/195 (4%)
Query: 300 IGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXX 358
IG+G G+VY A + G EVA++ +LQ + E +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 359 XDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
D +V+EY+ GSL + + +D Q + + ALE+LH S +IH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
K N+LL + L+DFG + E +++ + T +MAPE D++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSEMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 479 SFGIMLMETFTRKKP 493
S GIM +E + P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
++ SALEYLH IIH DLKP N+LL+++M ++DFG AK L E + +
Sbjct: 122 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 178
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLME 486
T Y++PE E + D+++ G ++ +
Sbjct: 179 TAQYVSPELLTEKSACKSSDLWALGCIIYQ 208
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 8/197 (4%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQY---GRAFKSFDIECDMXXXXXXXX 349
F ++G G F +V AR + E A+K+ + ++ E D+
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 350 XXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 409
D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 150
Query: 410 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG 469
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++PE E
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 210
Query: 470 QVSTNGDVYSFGIMLME 486
+ D+++ G ++ +
Sbjct: 211 SACKSSDLWALGCIIYQ 227
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
++ SALEYLH IIH DLKP N+LL+++M ++DFG AK L E + +
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 193
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLME 486
T Y++PE E + D+++ G ++ +
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQ 223
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 293 GFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIEC----DMXXXXXXX 348
+++ +IG G FG VY+A++ D E+ V + + G+AFK+ +++ D
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQGKAFKNRELQIMRKLDHCNIVRLR 79
Query: 349 XXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSS--NYILDIFQRLNIMIDVASALEYLH 406
+ + LVL+Y+P + S L + M + +L Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 407 -FGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE 464
FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y APE
Sbjct: 140 SFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 192
Query: 465 --YGREGQVSTNGDVYSFGIMLME 486
+G S+ DV+S G +L E
Sbjct: 193 LIFGATDYTSSI-DVWSAGCVLAE 215
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 28/214 (13%)
Query: 297 NNLIGRGGFGSVYKARIQ-DG--MEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXX 353
++IG G FG V KARI+ DG M+ A+K +Y D ++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 354 XXXXXXDDFKA---LVLEYMPHGSLEKCLYSSNYI---------------LDIFQRLNIM 395
+ + L +EY PHG+L L S + L Q L+
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 396 IDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTL 455
DVA ++YL IH +L N+L+ +N VA ++DFG+++ ++ + +T
Sbjct: 146 ADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 199
Query: 456 ATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT 489
+ +MA E +TN DV+S+G++L E +
Sbjct: 200 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 8/197 (4%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQY---GRAFKSFDIECDMXXXXXXXX 349
F ++G G F +V AR + E A+K+ + ++ E D+
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 350 XXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 409
D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 410 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG 469
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++PE E
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 470 QVSTNGDVYSFGIMLME 486
+ D+++ G ++ +
Sbjct: 210 SACKSSDLWALGCIIYQ 226
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 8/197 (4%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQY---GRAFKSFDIECDMXXXXXXXX 349
F ++G G F +V AR + E A+K+ + ++ E D+
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 350 XXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 409
D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 147
Query: 410 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG 469
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++PE E
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 470 QVSTNGDVYSFGIMLME 486
+ D+++ G ++ +
Sbjct: 208 SACKSSDLWALGCIIYQ 224
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 8/197 (4%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQY---GRAFKSFDIECDMXXXXXXXX 349
F ++G G F +V AR + E A+K+ + ++ E D+
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 350 XXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 409
D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 147
Query: 410 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG 469
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++PE E
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 470 QVSTNGDVYSFGIMLME 486
+ D+++ G ++ +
Sbjct: 208 SACKSSDLWALGCIIYQ 224
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 8/197 (4%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQY---GRAFKSFDIECDMXXXXXXXX 349
F ++G G F +V AR + E A+K+ + ++ E D+
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 350 XXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 409
D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 150
Query: 410 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG 469
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++PE E
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 210
Query: 470 QVSTNGDVYSFGIMLME 486
+ D+++ G ++ +
Sbjct: 211 SACKSSDLWALGCIIYQ 227
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
++ SALEYLH IIH DLKP N+LL+++M ++DFG AK L E + +
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVG 194
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLME 486
T Y++PE E + D+++ G ++ +
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQ 224
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
++ SALEYLH IIH DLKP N+LL+++M ++DFG AK L E + +
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLME 486
T Y++PE E + D+++ G ++ +
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQ 224
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 293 GFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIEC----DMXXXXXXX 348
+++ +IG G FG VY+A++ D E+ V + + G+AFK+ +++ D
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQGKAFKNRELQIMRKLDHCNIVRLR 79
Query: 349 XXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSS--NYILDIFQRLNIMIDVASALEYLH 406
+ + LVL+Y+P + S L + M + +L Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 407 -FGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE 464
FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y APE
Sbjct: 140 SFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRAPE 192
Query: 465 --YGREGQVSTNGDVYSFGIMLME 486
+G S+ DV+S G +L E
Sbjct: 193 LIFGATDYTSSI-DVWSAGCVLAE 215
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
++ SALEYLH IIH DLKP N+LL+++M ++DFG AK L E + +
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLME 486
T Y++PE E + D+++ G ++ +
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQ 226
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 8/197 (4%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQY---GRAFKSFDIECDMXXXXXXXX 349
F ++G G F +V AR + E A+K+ + ++ E D+
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 350 XXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 409
D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 152
Query: 410 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG 469
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++PE E
Sbjct: 153 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 212
Query: 470 QVSTNGDVYSFGIMLME 486
+ D+++ G ++ +
Sbjct: 213 SACKSSDLWALGCIIYQ 229
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
++ SALEYLH IIH DLKP N+LL+++M ++DFG AK L E + +
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLME 486
T Y++PE E + D+++ G ++ +
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQ 226
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
++ SALEYLH IIH DLKP N+LL+++M ++DFG AK L E + +
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLME 486
T Y++PE E + D+++ G ++ +
Sbjct: 197 TAQYVSPELLTEKSAXKSSDLWALGCIIYQ 226
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 8/197 (4%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQY---GRAFKSFDIECDMXXXXXXXX 349
F ++G G F +V AR + E A+K+ + ++ E D+
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 350 XXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 409
D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 410 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG 469
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++PE E
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 470 QVSTNGDVYSFGIMLME 486
+ D+++ G ++ +
Sbjct: 210 SACKSSDLWALGCIIYQ 226
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
++ SALEYLH IIH DLKP N+LL+++M ++DFG AK L E + +
Sbjct: 145 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 201
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLME 486
T Y++PE E + D+++ G ++ +
Sbjct: 202 TAQYVSPELLTEKSACKSSDLWALGCIIYQ 231
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 293 GFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIEC----DMXXXXXXX 348
+++ +IG G FG VY+A++ D E+ V + + G+AFK+ +++ D
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQGKAFKNRELQIMRKLDHCNIVRLR 79
Query: 349 XXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSS--NYILDIFQRLNIMIDVASALEYLH 406
+ + LVL+Y+P + S L + M + +L Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 407 -FGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE 464
FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y APE
Sbjct: 140 SFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 192
Query: 465 --YGREGQVSTNGDVYSFGIMLME 486
+G S+ DV+S G +L E
Sbjct: 193 LIFGATDYTSSI-DVWSAGCVLAE 215
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
++ E+M +GSL+ L ++ + Q + ++ +A+ ++YL + +H L N+L
Sbjct: 85 IITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRALAARNIL 141
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA---TIGYMAPEYGREGQVSTNGDVYSFG 481
++ N+V +SDFG+++ L + T T L I + APE + + ++ DV+S+G
Sbjct: 142 VNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYG 201
Query: 482 IMLMETFTR-KKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVS 540
I++ E + ++P + DMT + +N + ++D C S
Sbjct: 202 IVMWEVMSYGERP-----YWDMTNQDVINAI---------------EQDYRLPPPMDCPS 241
Query: 541 FIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLKN 577
+ L + C + R +IV L D +++N
Sbjct: 242 ALHQLMLDCWQKDRNHRPKFGQIVNTL----DKMIRN 274
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
LV+EY+P G L L LD + L + +EYL S +H DL N+L
Sbjct: 90 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNIL 146
Query: 425 LDDNMVAHLSDFGMAKPL-LKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
++ ++DFG+AK L L +D + + + I + APE + S DV+SFG++
Sbjct: 147 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 206
Query: 484 LMETFT 489
L E FT
Sbjct: 207 LYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
LV+EY+P G L L LD + L + +EYL S +H DL N+L
Sbjct: 91 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNIL 147
Query: 425 LDDNMVAHLSDFGMAKPL-LKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
++ ++DFG+AK L L +D + + + I + APE + S DV+SFG++
Sbjct: 148 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 207
Query: 484 LMETFT 489
L E FT
Sbjct: 208 LYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
LV+EY+P G L L LD + L + +EYL S +H DL N+L
Sbjct: 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNIL 159
Query: 425 LDDNMVAHLSDFGMAKPL-LKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
++ ++DFG+AK L L +D + + + I + APE + S DV+SFG++
Sbjct: 160 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 219
Query: 484 LMETFT 489
L E FT
Sbjct: 220 LYELFT 225
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 10/135 (7%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP----------II 414
++ EY +G L L + +L+ I AS + LHF V I
Sbjct: 127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCI 186
Query: 415 HCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTN 474
H D+ NVLL + VA + DFG+A+ ++ + + + + +MAPE + +
Sbjct: 187 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 246
Query: 475 GDVYSFGIMLMETFT 489
DV+S+GI+L E F+
Sbjct: 247 SDVWSYGILLWEIFS 261
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 8/195 (4%)
Query: 300 IGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXX 358
IG+G G+VY A + G EVA++ +LQ + E +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 359 XDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
D +V+EY+ GSL + + +D Q + + ALE+LH S +IH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
K N+LL + L+DFG + E ++ + T +MAPE D++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 479 SFGIMLMETFTRKKP 493
S GIM +E + P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 8/195 (4%)
Query: 300 IGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXX 358
IG+G G+VY A + G EVA++ +LQ + E +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 359 XDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
D +V+EY+ GSL + + +D Q + + ALE+LH S +IH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
K N+LL + L+DFG + E ++ + T +MAPE D++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 479 SFGIMLMETFTRKKP 493
S GIM +E + P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 33/220 (15%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DG--------------MEVAVKVFD-------LQYGRA 331
F E LIG GGFG V+KA+ + DG E VK + Y
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGC 73
Query: 332 FKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKA----LVLEYMPHGSLEKCLYSSN-YIL 386
+ FD + + K + +E+ G+LE+ + L
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 133
Query: 387 DIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED 446
D L + + ++Y+H S +IH DLKPSN+ L D + DFG+ L +
Sbjct: 134 DKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG 190
Query: 447 QSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLME 486
+ +T++ T+ YM+PE D+Y+ G++L E
Sbjct: 191 K---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 227
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 111/283 (39%), Gaps = 49/283 (17%)
Query: 294 FSENNLIGRGGFGSVYKARIQDGMEV-AVKVFDLQYGRAFKSFD-------IECDMXXXX 345
F++ + IG+G FG VYK EV A+K+ DL+ +CD
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 346 XXXXXXXXXXXXXXDDFKALVLEYMPHGS----LEKCLYSSNYILDIFQRLNIMIDVASA 401
+++EY+ GS L+ YI I + ++
Sbjct: 81 RYFGSYLKSTKLW------IIMEYLGGGSALDLLKPGPLEETYIATILR------EILKG 128
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
L+YLH S IH D+K +NVLL + L+DFG+A L D + + + T +M
Sbjct: 129 LDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNXFVGTPFWM 183
Query: 462 APEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVD 521
APE ++ D++S GI +E + P +DL P+ V+
Sbjct: 184 APEVIKQSAYDFKADIWSLGITAIELAKGEPPN--------------SDLHPMRVL---- 225
Query: 522 ANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIV 564
L K+ T +GQ C + P R AKE++
Sbjct: 226 --FLIPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELL 266
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 8/195 (4%)
Query: 300 IGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXX 358
IG+G G+VY A + G EVA++ +LQ + E +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 359 XDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
D +V+EY+ GSL + + +D Q + + ALE+LH S +IH D+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 143
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
K N+LL + L+DFG + E ++ + T +MAPE D++
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPKVDIW 201
Query: 479 SFGIMLMETFTRKKP 493
S GIM +E + P
Sbjct: 202 SLGIMAIEMIEGEPP 216
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 24/194 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
++ EYM +GSL L + + I L I + L++ +A + ++ IH DL+ +N+
Sbjct: 84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANI 140
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ D + ++DFG+A+ L+++ + + I + APE G + DV+SFGI+
Sbjct: 141 LVSDTLSCKIADFGLAR-LIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
L E T + I + MT + +L ++ C ++
Sbjct: 200 LTEIVTHGR----IPYPGMTNPEVIQNL---------------ERGYRMVRPDNCPEELY 240
Query: 544 NLAMKCTVESPEQR 557
L C E PE R
Sbjct: 241 QLMRLCWKERPEDR 254
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 124/289 (42%), Gaps = 34/289 (11%)
Query: 297 NNLIGRGGFGSVYKARIQDGME----VAVKVFDLQYG-RAFKSFDIECDMXXXXXXXXXX 351
+IG G FG V + R++ + VA+K Y R + F E +
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 352 XXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 411
++ E+M +G+L+ L ++ + Q + ++ +AS + YL +
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA---EM 135
Query: 412 PIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA---TIGYMAPEYGRE 468
+H DL N+L++ N+V +SDFG+++ L + T T +L I + APE
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAF 195
Query: 469 GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQK 528
+ ++ D +S+GI++ E + FG+ +W +S ++++A ++
Sbjct: 196 RKFTSASDAWSYGIVMWEVMS---------FGERP--YW-----DMSNQDVINA---IEQ 236
Query: 529 DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLKN 577
D C + + L + C + R ++V+ L D +++N
Sbjct: 237 DYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSAL----DKMIRN 281
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 300 IGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXX 358
+G G FG VYKA+ ++ G A KV + + + + +E ++
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 359 XDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
D +++E+ P G+++ + + L Q I + LE L+F +S IIH DL
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDL 135
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY-----GREGQVST 473
K NVL+ L+DFG++ LK Q + + T +MAPE ++
Sbjct: 136 KAGNVLMTLEGDIRLADFGVSAKNLKTLQK--RDSFIGTPYWMAPEVVMCETMKDTPYDY 193
Query: 474 NGDVYSFGIMLMETFTRKKPTDEI 497
D++S GI L+E + P E+
Sbjct: 194 KADIWSLGITLIEMAQIEPPHHEL 217
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 93/212 (43%), Gaps = 20/212 (9%)
Query: 299 LIGRGGFGSVYKARIQDGMEV-AVKV---FDLQYGRAFKSFDIECDMXXXXXXXXXXXXX 354
+IGRG FG V R + +V A+K+ F++ F E D+
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 355 XXXXXDDFKALVLEYMPHGSLEKCLYSSNY-ILDIFQRLNIMIDVASALEYLHFGYSVPI 413
D + +V+EYMP G L + SNY + + + R +V AL+ +H S+
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARF-YTAEVVLALDAIH---SMGF 194
Query: 414 IHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY----GREG 469
IH D+KP N+LLD + L+DFG + KE T + T Y++PE G +G
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDG 253
Query: 470 QVSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
D +S G+ L E P F+ D
Sbjct: 254 YYGRECDWWSVGVFLYEMLVGDTP----FYAD 281
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT 454
+ ++A AL++LH S+ II+ DLKP N+LLD+ L+DFG++K + D
Sbjct: 132 LAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSF 186
Query: 455 LATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
T+ YMAPE + + D +SFG+++ E T P
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT 454
+ ++A AL++LH S+ II+ DLKP N+LLD+ L+DFG++K + D
Sbjct: 133 LAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSF 187
Query: 455 LATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
T+ YMAPE + + D +SFG+++ E T P
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 93/212 (43%), Gaps = 20/212 (9%)
Query: 299 LIGRGGFGSVYKARIQDGMEV-AVKV---FDLQYGRAFKSFDIECDMXXXXXXXXXXXXX 354
+IGRG FG V R + +V A+K+ F++ F E D+
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 135
Query: 355 XXXXXDDFKALVLEYMPHGSLEKCLYSSNY-ILDIFQRLNIMIDVASALEYLHFGYSVPI 413
D + +V+EYMP G L + SNY + + + R +V AL+ +H S+
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARF-YTAEVVLALDAIH---SMGF 189
Query: 414 IHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY----GREG 469
IH D+KP N+LLD + L+DFG + KE T + T Y++PE G +G
Sbjct: 190 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDG 248
Query: 470 QVSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
D +S G+ L E P F+ D
Sbjct: 249 YYGRECDWWSVGVFLYEMLVGDTP----FYAD 276
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 13/213 (6%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKARIQDGME-VAVKVFDLQYGRAFKSFDIECDMXX 343
L++ + + + +G G F +VYKAR ++ + VA+K L + K +
Sbjct: 3 LDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALRE 62
Query: 344 XXXXXXXXXXXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
D F +LV ++M LE + ++ +L M+
Sbjct: 63 IKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMT 121
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
LEYLH + I+H DLKP+N+LLD+N V L+DFG+AK +++ + T
Sbjct: 122 LQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY--XHQVVTR 176
Query: 459 GYMAPEYGREGQVSTNG-DVYSFGIMLMETFTR 490
Y APE ++ G D+++ G +L E R
Sbjct: 177 WYRAPELLFGARMYGVGVDMWAVGCILAELLLR 209
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 300 IGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXX 358
+G G FG VYKA+ ++ G A KV + + + + +E ++
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 359 XDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
D +++E+ P G+++ + + L Q I + LE L+F +S IIH DL
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDL 143
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY-----GREGQVST 473
K NVL+ L+DFG++ LK Q + + T +MAPE ++
Sbjct: 144 KAGNVLMTLEGDIRLADFGVSAKNLKTLQK--RDSFIGTPYWMAPEVVMCETMKDTPYDY 201
Query: 474 NGDVYSFGIMLMETFTRKKPTDEI 497
D++S GI L+E + P E+
Sbjct: 202 KADIWSLGITLIEMAQIEPPHHEL 225
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
VA +E+L S IH DL N+LL +N V + DFG+A+ + K + + T
Sbjct: 208 VARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 458 IGYMAPEYGREGQVSTNGDVYSFGIMLMETFT 489
+ +MAPE + ST DV+S+G++L E F+
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT 454
+ ++A AL++LH S+ II+ DLKP N+LLD+ L+DFG++K + D
Sbjct: 132 LAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSF 186
Query: 455 LATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT 489
T+ YMAPE + + D +SFG+++ E T
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 221
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 29/224 (12%)
Query: 286 EIFQATNGFSENNLIGRGGFGSVYKARIQDGMEVAVKV----FDLQYGRAFKSFDIECDM 341
IF+ ++ ++G+G FG K ++ EV V FD + R F E +
Sbjct: 5 RIFRPSD-LIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLK---EVKV 60
Query: 342 XXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 401
D + EY+ G+L + S + QR++ D+AS
Sbjct: 61 MRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASG 120
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG-- 459
+ YLH S+ IIH DL N L+ +N ++DFG+A+ ++ E TQ + L ++
Sbjct: 121 MAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK---TQPEGLRSLKKP 174
Query: 460 -------------YMAPEYGREGQVSTNGDVYSFGIMLMETFTR 490
+MAPE DV+SFGI+L E R
Sbjct: 175 DRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGR 218
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 93/212 (43%), Gaps = 20/212 (9%)
Query: 299 LIGRGGFGSVYKARIQDGMEV-AVKV---FDLQYGRAFKSFDIECDMXXXXXXXXXXXXX 354
+IGRG FG V R + +V A+K+ F++ F E D+
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 355 XXXXXDDFKALVLEYMPHGSLEKCLYSSNY-ILDIFQRLNIMIDVASALEYLHFGYSVPI 413
D + +V+EYMP G L + SNY + + + R +V AL+ +H S+
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARF-YTAEVVLALDAIH---SMGF 194
Query: 414 IHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY----GREG 469
IH D+KP N+LLD + L+DFG + KE T + T Y++PE G +G
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDG 253
Query: 470 QVSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
D +S G+ L E P F+ D
Sbjct: 254 YYGRECDWWSVGVFLYEMLVGDTP----FYAD 281
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 84/195 (43%), Gaps = 8/195 (4%)
Query: 300 IGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXX 358
IG+G G+VY A + G EVA++ +LQ + E +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 359 XDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
D +V+EY+ GSL + + +D Q + + ALE+LH S +IH ++
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRNI 143
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
K N+LL + L+DFG + E ++ + T +MAPE D++
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIW 201
Query: 479 SFGIMLMETFTRKKP 493
S GIM +E + P
Sbjct: 202 SLGIMAIEMIEGEPP 216
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDL---QYGRAFKSFDIECDMXXXXXXXX 349
FS+ IG G FG+VY AR +++ VA+K Q ++ E
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 350 XXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVAS----ALEYL 405
+ LV+EY CL S++ +L++ ++ +++A+ AL+ L
Sbjct: 116 TIQYRGCYLREHTAWLVMEY--------CLGSASDLLEVHKKPLQEVEIAAVTHGALQGL 167
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
+ +S +IH D+K N+LL + + L DFG A + + + T +MAPE
Sbjct: 168 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWMAPEV 221
Query: 466 ---GREGQVSTNGDVYSFGIMLMETFTRKKP 493
EGQ DV+S GI +E RK P
Sbjct: 222 ILAMDEGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDL---QYGRAFKSFDIECDMXXXXXXXX 349
FS+ IG G FG+VY AR +++ VA+K Q ++ E
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 350 XXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVAS----ALEYL 405
+ LV+EY CL S++ +L++ ++ +++A+ AL+ L
Sbjct: 77 TIQYRGCYLREHTAWLVMEY--------CLGSASDLLEVHKKPLQEVEIAAVTHGALQGL 128
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
+ +S +IH D+K N+LL + + L DFG A + + + T +MAPE
Sbjct: 129 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWMAPEV 182
Query: 466 ---GREGQVSTNGDVYSFGIMLMETFTRKKP 493
EGQ DV+S GI +E RK P
Sbjct: 183 ILAMDEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 392 LNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ 451
L VA +E+L F +H DL NVL+ V + DFG+A+ ++ + + +
Sbjct: 175 LCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVR 231
Query: 452 TQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT 489
+ +MAPE EG + DV+S+GI+L E F+
Sbjct: 232 GNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 92/195 (47%), Gaps = 8/195 (4%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGR-AFKSFDIECDMXXXXXXXXXXXXXXXXX 358
+G G FG V+ + +VAVK L+ G + ++F E ++
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKT--LKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 359 XDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL-NIMIDVASALEYLHFGYSVPIIHCD 417
++ ++ EYM GSL L S + +L + +A + Y+ IH D
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRD 135
Query: 418 LKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDV 477
L+ +NVL+ ++++ ++DFG+A+ ++++++ + I + APE G + DV
Sbjct: 136 LRAANVLVSESLMCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDV 194
Query: 478 YSFGIMLMETFTRKK 492
+SFGI+L E T K
Sbjct: 195 WSFGILLYEIVTYGK 209
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP----------II 414
++ EY +G L L + +L+ I S + LHF V I
Sbjct: 127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCI 186
Query: 415 HCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTN 474
H D+ NVLL + VA + DFG+A+ ++ + + + + +MAPE + +
Sbjct: 187 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 246
Query: 475 GDVYSFGIMLMETFT 489
DV+S+GI+L E F+
Sbjct: 247 SDVWSYGILLWEIFS 261
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 112/284 (39%), Gaps = 38/284 (13%)
Query: 300 IGRGGFGSVYKARIQDGME------VAVKVFDLQYG-RAFKSFDIECDMXXXXXXXXXXX 352
+G+G FG VY+ +D ++ VAVK + R F E +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 353 XXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILD---------IFQRLNIMIDVASALE 403
+V+E M HG L+ L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 404 YLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
YL+ + +H DL N ++ + + DFGM + + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 464 EYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDAN 523
E ++G +T+ D++SFG++L E + + + + LK ++D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 249
Query: 524 LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
L Q D C + +L C +P+ R EIV L
Sbjct: 250 YLDQPD-------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 7/100 (7%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT 454
+ ++A L++LH S+ II+ DLKP N+LLD+ L+DFG++K + D
Sbjct: 136 LAELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAI--DHEKKAYSF 190
Query: 455 LATIGYMAPE-YGREGQVSTNGDVYSFGIMLMETFTRKKP 493
T+ YMAPE R+G S + D +S+G+++ E T P
Sbjct: 191 CGTVEYMAPEVVNRQGH-SHSADWWSYGVLMFEMLTGSLP 229
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 119/294 (40%), Gaps = 33/294 (11%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDG----MEVAVKVFDLQYGRAFKSFDIECD- 340
IF+ T + ++G G FG+V+K I +G + V +KV + + GR +SF D
Sbjct: 27 IFKETE-LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR--QSFQAVTDH 83
Query: 341 -MXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVA 399
+ LV +Y+P GSL + L LN + +A
Sbjct: 84 MLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIA 143
Query: 400 SALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG 459
+ YL ++H +L NVLL ++DFG+A L +D+ L ++ I
Sbjct: 144 KGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 200
Query: 460 YMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEI 519
+MA E G+ + DV+S+G+ + E T FG P + + +
Sbjct: 201 WMALESIHFGKYTHQSDVWSYGVTVWELMT---------FGAE----------PYAGLRL 241
Query: 520 VDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI-RD 572
+ L +K E C ++ + +KC + R KE+ ++ RD
Sbjct: 242 AEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 295
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 119/294 (40%), Gaps = 33/294 (11%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDG----MEVAVKVFDLQYGRAFKSFDIECD- 340
IF+ T + ++G G FG+V+K I +G + V +KV + + GR +SF D
Sbjct: 9 IFKETE-LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR--QSFQAVTDH 65
Query: 341 -MXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVA 399
+ LV +Y+P GSL + L LN + +A
Sbjct: 66 MLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIA 125
Query: 400 SALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG 459
+ YL ++H +L NVLL ++DFG+A L +D+ L ++ I
Sbjct: 126 KGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 182
Query: 460 YMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEI 519
+MA E G+ + DV+S+G+ + E T FG P + + +
Sbjct: 183 WMALESIHFGKYTHQSDVWSYGVTVWELMT---------FGAE----------PYAGLRL 223
Query: 520 VDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI-RD 572
+ L +K E C ++ + +KC + R KE+ ++ RD
Sbjct: 224 AEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 112/284 (39%), Gaps = 38/284 (13%)
Query: 300 IGRGGFGSVYKARIQDGME------VAVKVFDLQYG-RAFKSFDIECDMXXXXXXXXXXX 352
+G+G FG VY+ +D ++ VAVK + R F E +
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 353 XXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILD---------IFQRLNIMIDVASALE 403
+V+E M HG L+ L S + + + + + ++A +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 404 YLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
YL+ + +H DL N ++ + + DFGM + + + D + L + +MAP
Sbjct: 142 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 464 EYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDAN 523
E ++G +T+ D++SFG++L E + + + + LK ++D
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 246
Query: 524 LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
L Q D C + +L C +P+ R EIV L
Sbjct: 247 YLDQPD-------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 283
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 6/127 (4%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
LV+EY+P GSL Y + + + Q L + + YLH + IH DL NVL
Sbjct: 112 LVMEYVPLGSLRD--YLPRHSIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVL 166
Query: 425 LDDNMVAHLSDFGMAKPLLK-EDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
LD++ + + DFG+AK + + + + + + + APE +E + DV+SFG+
Sbjct: 167 LDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVT 226
Query: 484 LMETFTR 490
L E T
Sbjct: 227 LYELLTH 233
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
L++E++P GSL++ L + +++ Q+L + + ++YL S +H DL NVL
Sbjct: 102 LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVL 158
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLT-QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
++ + DFG+ K + + + T + + + + APE + + DV+SFG+
Sbjct: 159 VESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVT 218
Query: 484 LMETFT 489
L E T
Sbjct: 219 LHELLT 224
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 106/284 (37%), Gaps = 38/284 (13%)
Query: 300 IGRGGFGSVYKARIQ------DGMEVAVKVFDLQYGRAFK-SFDIECDMXXXXXXXXXXX 352
+G G FG VY+ ++ ++VAVK Y + F +E +
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 353 XXXXXXXDDFKALVLEYMPHGSLEKCLY------SSNYILDIFQRLNIMIDVASALEYLH 406
+ ++LE M G L+ L S L + L++ D+A +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 407 FGYSVPIIHCDLKPSNVLLD---DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
+ IH D+ N LL VA + DFGMA+ + + + + +M P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 464 EYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDAN 523
E EG ++ D +SFG++L E F+ G M N V+E V +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFVTSG 276
Query: 524 LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C ++ + +C PE R N I+ R+
Sbjct: 277 ------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
L++E++P GSL++ L + +++ Q+L + + ++YL S +H DL NVL
Sbjct: 90 LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVL 146
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLT-QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
++ + DFG+ K + + + T + + + + APE + + DV+SFG+
Sbjct: 147 VESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVT 206
Query: 484 LMETFT 489
L E T
Sbjct: 207 LHELLT 212
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 111/284 (39%), Gaps = 38/284 (13%)
Query: 300 IGRGGFGSVYKARIQDGME------VAVKVFDLQYG-RAFKSFDIECDMXXXXXXXXXXX 352
+G+G FG VY+ +D ++ VAVK + R F E +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 353 XXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILD---------IFQRLNIMIDVASALE 403
+V+E M HG L+ L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 404 YLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
YL+ + +H DL N ++ + + DFGM + + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 464 EYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDAN 523
E ++G +T+ D++SFG++L E + + + + LK ++D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 249
Query: 524 LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
L Q D C + +L C +P R EIV L
Sbjct: 250 YLDQPD-------NCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 112/284 (39%), Gaps = 38/284 (13%)
Query: 300 IGRGGFGSVYKARIQDGME------VAVKVFDLQYG-RAFKSFDIECDMXXXXXXXXXXX 352
+G+G FG VY+ +D ++ VAVK + R F E +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 353 XXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILD---------IFQRLNIMIDVASALE 403
+V+E M HG L+ L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 404 YLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
YL+ + +H DL N ++ + + DFGM + + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 464 EYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDAN 523
E ++G +T+ D++SFG++L E + + + + LK ++D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 249
Query: 524 LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
L Q D C + +L C +P+ R EIV L
Sbjct: 250 YLDQPD-------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 95/212 (44%), Gaps = 31/212 (14%)
Query: 365 LVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVASALEYLHFGYSVPIIH 415
+++E M G L+ L S +N +L + + + + ++A + YL+ + +H
Sbjct: 99 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 155
Query: 416 CDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG 475
DL N ++ ++ + DFGM + + + D + L + +M+PE ++G +T
Sbjct: 156 RDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYS 215
Query: 476 DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTK 535
DV+SFG++L E T + + + L+ +++ LL + D
Sbjct: 216 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD------ 257
Query: 536 GQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C +F L C +P+ R + EI++ +
Sbjct: 258 -NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/337 (19%), Positives = 135/337 (40%), Gaps = 44/337 (13%)
Query: 253 VILFILRYRKRGKPLPNDANMPRISNQRRFTYLEIFQ------ATNGFSENNLIGRGGFG 306
VI+ + +RKR + + N F+ +++ A + + +G+G FG
Sbjct: 2 VIMLYVFHRKRNNSRLGNGVLYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFG 61
Query: 307 SVY----KARIQDGMEVAVKVFDLQYGRAFKS---FDIECDMXXXXXXXXXXXXXXXXXX 359
VY K ++D E V + + + + F E +
Sbjct: 62 MVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 121
Query: 360 DDFKALVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVASALEYLHFGYS 410
+++E M G L+ L S +N +L + + + + ++A + YL+ +
Sbjct: 122 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---A 178
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ 470
+H DL N ++ ++ + DFGM + + + D + L + +M+PE ++G
Sbjct: 179 NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV 238
Query: 471 VSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDE 530
+T DV+SFG++L E T + + + L+ +++ LL + D
Sbjct: 239 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD- 285
Query: 531 HFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C +F L C +P+ R + EI++ +
Sbjct: 286 ------NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 316
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 112/284 (39%), Gaps = 38/284 (13%)
Query: 300 IGRGGFGSVYKARIQDGME------VAVKVFDLQYG-RAFKSFDIECDMXXXXXXXXXXX 352
+G+G FG VY+ +D ++ VAVK + R F E +
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 353 XXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILD---------IFQRLNIMIDVASALE 403
+V+E M HG L+ L S + + + + + ++A +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 404 YLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
YL+ + +H DL N ++ + + DFGM + + + D + L + +MAP
Sbjct: 144 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 464 EYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDAN 523
E ++G +T+ D++SFG++L E + + + + LK ++D
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 248
Query: 524 LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
L Q D C + +L C +P+ R EIV L
Sbjct: 249 YLDQPD-------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 285
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 26/211 (12%)
Query: 289 QATNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXX 348
Q ++ +IG G FG V++A++ + EVA+K LQ R FK+ +++
Sbjct: 37 QREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKV-LQDKR-FKNRELQIMRIVKHPNV 94
Query: 349 XXXXXXXXXXXDD----FKALVLEYMPHGSLEKCLYSSNYILDIFQRLNI------MIDV 398
D F LVLEY+P E +S + + Q + + M +
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVP----ETVYRASRHYAKLKQTMPMLLIKLYMYQL 150
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
+L Y+H S+ I H D+KP N+LLD + V L DFG AK L+ + +++ + +
Sbjct: 151 LRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS---XICS 204
Query: 458 IGYMAPE--YGREGQVSTNGDVYSFGIMLME 486
Y APE +G +TN D++S G ++ E
Sbjct: 205 RYYRAPELIFG-ATNYTTNIDIWSTGCVMAE 234
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 84/210 (40%), Gaps = 32/210 (15%)
Query: 361 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKP 420
D K+ + E P S SS +LD+ L++ D+A +YL + IH D+
Sbjct: 111 DLKSFLRETRPRPSQP----SSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAA 160
Query: 421 SNVLLD---DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDV 477
N LL VA + DFGMA+ + + + + +M PE EG ++ D
Sbjct: 161 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 220
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQ 537
+SFG++L E F+ G M N V+E V +
Sbjct: 221 WSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFVTSG------GRMDPPKN 261
Query: 538 CVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C ++ + +C PE R N I+ R+
Sbjct: 262 CPGPVYRIMTQCWQHQPEDRPNFAIILERI 291
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 299 LIGRGGFGSVYKARIQDGMEV-AVKV---FDLQYGRAFKSFDIECDMXXXXXXXXXXXXX 354
+IGRG FG V R + +V A+K+ F++ F E D+
Sbjct: 82 VIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 141
Query: 355 XXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 414
D + +V+EYMP G L + SNY + +V AL+ +H S+ +I
Sbjct: 142 CAFQDDKYLYMVMEYMPGGDLVNLM--SNYDVPEKWAKFYTAEVVLALDAIH---SMGLI 196
Query: 415 HCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT-LATIGYMAPEY----GREG 469
H D+KP N+LLD + L+DFG + ++ + T + T Y++PE G +G
Sbjct: 197 HRDVKPDNMLLDKHGHLKLADFGTCMKM--DETGMVHCDTAVGTPDYISPEVLKSQGGDG 254
Query: 470 QVSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
D +S G+ L E P F+ D
Sbjct: 255 YYGRECDWWSVGVFLFEMLVGDTP----FYAD 282
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 293 GFSENNLIGRGGFGSVYKARIQDGME-VAVKVFDLQYGRAFKSFDIEC----DMXXXXXX 347
+++ +IG G FG VY+A++ D E VA+K LQ R FK+ +++ D
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKNRELQIMRKLDHCNIVRL 86
Query: 348 XXXXXXXXXXXXDDFKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
+ + LVL+Y+P + + + L + M + +L Y+
Sbjct: 87 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 146
Query: 406 H-FGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y AP
Sbjct: 147 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRAP 199
Query: 464 E--YGREGQVSTNGDVYSFGIMLME 486
E +G S+ DV+S G +L E
Sbjct: 200 ELIFGATDYTSSI-DVWSAGCVLAE 223
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 293 GFSENNLIGRGGFGSVYKARIQDGME-VAVKVFDLQYGRAFKSFDIEC----DMXXXXXX 347
+++ +IG G FG VY+A++ D E VA+K LQ R FK+ +++ D
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKNRELQIMRKLDHCNIVRL 97
Query: 348 XXXXXXXXXXXXDDFKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
+ + LVL+Y+P + + + L + M + +L Y+
Sbjct: 98 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 157
Query: 406 H-FGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y AP
Sbjct: 158 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRAP 210
Query: 464 E--YGREGQVSTNGDVYSFGIMLME 486
E +G S+ DV+S G +L E
Sbjct: 211 ELIFGATDYTSSI-DVWSAGCVLAE 234
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 6/127 (4%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
LV+EY+P GSL Y + + + Q L + + YLH S IH +L NVL
Sbjct: 95 LVMEYVPLGSLRD--YLPRHSIGLAQLLLFAQQICEGMAYLH---SQHYIHRNLAARNVL 149
Query: 425 LDDNMVAHLSDFGMAKPLLK-EDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
LD++ + + DFG+AK + + + + + + + APE +E + DV+SFG+
Sbjct: 150 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVT 209
Query: 484 LMETFTR 490
L E T
Sbjct: 210 LYELLTH 216
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 293 GFSENNLIGRGGFGSVYKARIQDGME-VAVKVFDLQYGRAFKSFDIEC----DMXXXXXX 347
+++ +IG G FG VY+A++ D E VA+K LQ R FK+ +++ D
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKNRELQIMRKLDHCNIVRL 79
Query: 348 XXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSS--NYILDIFQRLNIMIDVASALEYL 405
+ + LVL+Y+P + S L + M + +L Y+
Sbjct: 80 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 139
Query: 406 H-FGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y AP
Sbjct: 140 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRAP 192
Query: 464 E--YGREGQVSTNGDVYSFGIMLME 486
E +G S+ DV+S G +L E
Sbjct: 193 ELIFGATDYTSSI-DVWSAGCVLAE 216
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 293 GFSENNLIGRGGFGSVYKARIQDGME-VAVKVFDLQYGRAFKSFDIEC----DMXXXXXX 347
+++ +IG G FG VY+A++ D E VA+K LQ R FK+ +++ D
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKNRELQIMRKLDHCNIVRL 78
Query: 348 XXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSS--NYILDIFQRLNIMIDVASALEYL 405
+ + LVL+Y+P + S L + M + +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 406 H-FGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y AP
Sbjct: 139 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRAP 191
Query: 464 E--YGREGQVSTNGDVYSFGIMLME 486
E +G S+ DV+S G +L E
Sbjct: 192 ELIFGATDYTSSI-DVWSAGCVLAE 215
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 293 GFSENNLIGRGGFGSVYKARIQDGME-VAVKVFDLQYGRAFKSFDIEC----DMXXXXXX 347
+++ +IG G FG VY+A++ D E VA+K LQ R FK+ +++ D
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKNRELQIMRKLDHCNIVRL 90
Query: 348 XXXXXXXXXXXXDDFKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
+ + LVL+Y+P + + + L + M + +L Y+
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 406 H-FGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y AP
Sbjct: 151 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRAP 203
Query: 464 E--YGREGQVSTNGDVYSFGIMLME 486
E +G S+ DV+S G +L E
Sbjct: 204 ELIFGATDYTSSI-DVWSAGCVLAE 227
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 87/216 (40%), Gaps = 38/216 (17%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVK---------------------VFDLQYGRA 331
F E LIG GGFG V+KA+ + DG +K V + Y
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGC 72
Query: 332 FKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQ 390
+ FD + + + +E+ G+LE+ + LD
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLF---------IQMEFCDKGTLEQWIEKRRGEKLDKVL 123
Query: 391 RLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLT 450
L + + ++Y+H S +I+ DLKPSN+ L D + DFG+ L + +
Sbjct: 124 ALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK--- 177
Query: 451 QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLME 486
+ ++ T+ YM+PE D+Y+ G++L E
Sbjct: 178 RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 213
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 95/212 (44%), Gaps = 31/212 (14%)
Query: 365 LVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVASALEYLHFGYSVPIIH 415
+++E M G L+ L S +N +L + + + + ++A + YL+ + +H
Sbjct: 92 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 148
Query: 416 CDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG 475
DL N ++ ++ + DFGM + + + D + L + +M+PE ++G +T
Sbjct: 149 RDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 208
Query: 476 DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTK 535
DV+SFG++L E T + + + L+ +++ LL + D
Sbjct: 209 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD------ 250
Query: 536 GQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C +F L C +P+ R + EI++ +
Sbjct: 251 -NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 293 GFSENNLIGRGGFGSVYKARIQDGME-VAVKVFDLQYGRAFKSFDIEC----DMXXXXXX 347
+++ +IG G FG VY+A++ D E VA+K LQ R FK+ +++ D
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKNRELQIMRKLDHCNIVRL 78
Query: 348 XXXXXXXXXXXXDDFKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
+ + LVL+Y+P + + + L + M + +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 406 H-FGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y AP
Sbjct: 139 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRAP 191
Query: 464 E--YGREGQVSTNGDVYSFGIMLME 486
E +G S+ DV+S G +L E
Sbjct: 192 ELIFGATDYTSSI-DVWSAGCVLAE 215
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 84/210 (40%), Gaps = 32/210 (15%)
Query: 361 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKP 420
D K+ + E P S SS +LD+ L++ D+A +YL + IH D+
Sbjct: 126 DLKSFLRETRPRPSQP----SSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAA 175
Query: 421 SNVLLD---DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDV 477
N LL VA + DFGMA+ + + + + +M PE EG ++ D
Sbjct: 176 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 235
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQ 537
+SFG++L E F+ G M N V+E V +
Sbjct: 236 WSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFVTSG------GRMDPPKN 276
Query: 538 CVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C ++ + +C PE R N I+ R+
Sbjct: 277 CPGPVYRIMTQCWQHQPEDRPNFAIILERI 306
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 84/210 (40%), Gaps = 32/210 (15%)
Query: 361 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKP 420
D K+ + E P S SS +LD+ L++ D+A +YL + IH D+
Sbjct: 119 DLKSFLRETRPRPSQP----SSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAA 168
Query: 421 SNVLLD---DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDV 477
N LL VA + DFGMA+ + + + + +M PE EG ++ D
Sbjct: 169 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 228
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQ 537
+SFG++L E F+ G M N V+E V +
Sbjct: 229 WSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFVTSG------GRMDPPKN 269
Query: 538 CVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C ++ + +C PE R N I+ R+
Sbjct: 270 CPGPVYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 84/210 (40%), Gaps = 32/210 (15%)
Query: 361 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKP 420
D K+ + E P S SS +LD+ L++ D+A +YL + IH D+
Sbjct: 120 DLKSFLRETRPRPSQP----SSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAA 169
Query: 421 SNVLLD---DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDV 477
N LL VA + DFGMA+ + + + + +M PE EG ++ D
Sbjct: 170 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 229
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQ 537
+SFG++L E F+ G M N V+E V +
Sbjct: 230 WSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFVTSG------GRMDPPKN 270
Query: 538 CVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C ++ + +C PE R N I+ R+
Sbjct: 271 CPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 293 GFSENNLIGRGGFGSVYKARIQDGME-VAVKVFDLQYGRAFKSFDIEC----DMXXXXXX 347
+++ +IG G FG VY+A++ D E VA+K LQ R FK+ +++ D
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKNRELQIMRKLDHCNIVRL 90
Query: 348 XXXXXXXXXXXXDDFKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
+ + LVL+Y+P + + + L + M + +L Y+
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 406 H-FGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y AP
Sbjct: 151 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRAP 203
Query: 464 E--YGREGQVSTNGDVYSFGIMLME 486
E +G S+ DV+S G +L E
Sbjct: 204 ELIFGATDYTSSI-DVWSAGCVLAE 227
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 84/210 (40%), Gaps = 32/210 (15%)
Query: 361 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKP 420
D K+ + E P S SS +LD+ L++ D+A +YL + IH D+
Sbjct: 119 DLKSFLRETRPRPSQP----SSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAA 168
Query: 421 SNVLLD---DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDV 477
N LL VA + DFGMA+ + + + + +M PE EG ++ D
Sbjct: 169 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 228
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQ 537
+SFG++L E F+ G M N V+E V +
Sbjct: 229 WSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFVTSG------GRMDPPKN 269
Query: 538 CVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C ++ + +C PE R N I+ R+
Sbjct: 270 CPGPVYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 293 GFSENNLIGRGGFGSVYKARIQDGME-VAVKVFDLQYGRAFKSFDIEC----DMXXXXXX 347
+++ +IG G FG VY+A++ D E VA+K LQ R FK+ +++ D
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKNRELQIMRKLDHCNIVRL 112
Query: 348 XXXXXXXXXXXXDDFKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
+ + LVL+Y+P + + + L + M + +L Y+
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 406 H-FGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y AP
Sbjct: 173 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRAP 225
Query: 464 E--YGREGQVSTNGDVYSFGIMLME 486
E +G S+ DV+S G +L E
Sbjct: 226 ELIFGATDYTSSI-DVWSAGCVLAE 249
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 84/210 (40%), Gaps = 32/210 (15%)
Query: 361 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKP 420
D K+ + E P S SS +LD+ L++ D+A +YL + IH D+
Sbjct: 120 DLKSFLRETRPRPSQP----SSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAA 169
Query: 421 SNVLLD---DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDV 477
N LL VA + DFGMA+ + + + + +M PE EG ++ D
Sbjct: 170 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 229
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQ 537
+SFG++L E F+ G M N V+E V +
Sbjct: 230 WSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFVTSG------GRMDPPKN 270
Query: 538 CVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C ++ + +C PE R N I+ R+
Sbjct: 271 CPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 84/210 (40%), Gaps = 32/210 (15%)
Query: 361 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKP 420
D K+ + E P S SS +LD+ L++ D+A +YL + IH D+
Sbjct: 136 DLKSFLRETRPRPSQP----SSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAA 185
Query: 421 SNVLLD---DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDV 477
N LL VA + DFGMA+ + + + + +M PE EG ++ D
Sbjct: 186 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 245
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQ 537
+SFG++L E F+ G M N V+E V +
Sbjct: 246 WSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFVTSG------GRMDPPKN 286
Query: 538 CVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C ++ + +C PE R N I+ R+
Sbjct: 287 CPGPVYRIMTQCWQHQPEDRPNFAIILERI 316
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 84/210 (40%), Gaps = 32/210 (15%)
Query: 361 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKP 420
D K+ + E P S SS +LD+ L++ D+A +YL + IH D+
Sbjct: 134 DLKSFLRETRPRPSQP----SSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAA 183
Query: 421 SNVLLD---DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDV 477
N LL VA + DFGMA+ + + + + +M PE EG ++ D
Sbjct: 184 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 243
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQ 537
+SFG++L E F+ G M N V+E V +
Sbjct: 244 WSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFVTSG------GRMDPPKN 284
Query: 538 CVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C ++ + +C PE R N I+ R+
Sbjct: 285 CPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 95/212 (44%), Gaps = 31/212 (14%)
Query: 365 LVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVASALEYLHFGYSVPIIH 415
+++E M G L+ L S +N +L + + + + ++A + YL+ + +H
Sbjct: 99 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 155
Query: 416 CDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG 475
DL N ++ ++ + DFGM + + + D + L + +M+PE ++G +T
Sbjct: 156 RDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 215
Query: 476 DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTK 535
DV+SFG++L E T + + + L+ +++ LL + D
Sbjct: 216 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD------ 257
Query: 536 GQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C +F L C +P+ R + EI++ +
Sbjct: 258 -NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 84/210 (40%), Gaps = 32/210 (15%)
Query: 361 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKP 420
D K+ + E P S SS +LD+ L++ D+A +YL + IH D+
Sbjct: 134 DLKSFLRETRPRPSQP----SSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAA 183
Query: 421 SNVLLD---DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDV 477
N LL VA + DFGMA+ + + + + +M PE EG ++ D
Sbjct: 184 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 243
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQ 537
+SFG++L E F+ G M N V+E V +
Sbjct: 244 WSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFVTSG------GRMDPPKN 284
Query: 538 CVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C ++ + +C PE R N I+ R+
Sbjct: 285 CPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 293 GFSENNLIGRGGFGSVYKARIQDGME-VAVKVFDLQYGRAFKSFDIEC----DMXXXXXX 347
+++ +IG G FG VY+A++ D E VA+K LQ R FK+ +++ D
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKNRELQIMRKLDHCNIVRL 82
Query: 348 XXXXXXXXXXXXDDFKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
+ + LVL+Y+P + + + L + M + +L Y+
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 142
Query: 406 H-FGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y AP
Sbjct: 143 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRAP 195
Query: 464 E--YGREGQVSTNGDVYSFGIMLME 486
E +G S+ DV+S G +L E
Sbjct: 196 ELIFGATDYTSSI-DVWSAGCVLAE 219
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 95/212 (44%), Gaps = 31/212 (14%)
Query: 365 LVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVASALEYLHFGYSVPIIH 415
+++E M G L+ L S +N +L + + + + ++A + YL+ + +H
Sbjct: 95 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 151
Query: 416 CDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG 475
DL N ++ ++ + DFGM + + + D + L + +M+PE ++G +T
Sbjct: 152 RDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 211
Query: 476 DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTK 535
DV+SFG++L E T + + + L+ +++ LL + D
Sbjct: 212 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD------ 253
Query: 536 GQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C +F L C +P+ R + EI++ +
Sbjct: 254 -NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 284
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 97/204 (47%), Gaps = 28/204 (13%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSN 422
++ +E+M GSL++ L + I + I +++I V L YL + I+H D+KPSN
Sbjct: 83 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 138
Query: 423 VLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGI 482
+L++ L DFG++ L+ E + + T YM+PE + S D++S G+
Sbjct: 139 ILVNSRGEIKLCDFGVSGQLIDE----MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGL 194
Query: 483 MLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFI 542
L+E + P P+++ E++D ++++ + + F
Sbjct: 195 SLVEMAVGRYPRP-----------------PMAIFELLDY-IVNEPPPKLPSAVFSLEFQ 236
Query: 543 FNLAMKCTVESPEQRINAKEIVTR 566
+ KC +++P +R + K+++
Sbjct: 237 -DFVNKCLIKNPAERADLKQLMVH 259
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 293 GFSENNLIGRGGFGSVYKARIQDGME-VAVKVFDLQYGRAFKSFDIEC----DMXXXXXX 347
+++ +IG G FG VY+A++ D E VA+K LQ R FK+ +++ D
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKNRELQIMRKLDHCNIVRL 78
Query: 348 XXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSS--NYILDIFQRLNIMIDVASALEYL 405
+ + LVL+Y+P + S L + M + +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 406 H-FGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y AP
Sbjct: 139 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAP 191
Query: 464 E--YGREGQVSTNGDVYSFGIMLME 486
E +G S+ DV+S G +L E
Sbjct: 192 ELIFGATDYTSSI-DVWSAGCVLAE 215
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 95/212 (44%), Gaps = 31/212 (14%)
Query: 365 LVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVASALEYLHFGYSVPIIH 415
+++E M G L+ L S +N +L + + + + ++A + YL+ + +H
Sbjct: 98 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 154
Query: 416 CDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG 475
DL N ++ ++ + DFGM + + + D + L + +M+PE ++G +T
Sbjct: 155 RDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 214
Query: 476 DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTK 535
DV+SFG++L E T + + + L+ +++ LL + D
Sbjct: 215 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD------ 256
Query: 536 GQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C +F L C +P+ R + EI++ +
Sbjct: 257 -NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 293 GFSENNLIGRGGFGSVYKARIQDGME-VAVKVFDLQYGRAFKSFDIEC----DMXXXXXX 347
+++ +IG G FG VY+A++ D E VA+K LQ R FK+ +++ D
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKNRELQIMRKLDHCNIVRL 91
Query: 348 XXXXXXXXXXXXDDFKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
+ + LVL+Y+P + + + L + M + +L Y+
Sbjct: 92 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 151
Query: 406 H-FGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y AP
Sbjct: 152 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAP 204
Query: 464 E--YGREGQVSTNGDVYSFGIMLME 486
E +G S+ DV+S G +L E
Sbjct: 205 ELIFGATDYTSSI-DVWSAGCVLAE 228
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 105/260 (40%), Gaps = 38/260 (14%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGR-AFKSFDIECDMXXXXXXXXXXXXXXXXX 358
+G G FG V+ A +VAVK ++ G + ++F E ++
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKT--MKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 359 XDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASAL-EYLHFGYSVPIIHCD 417
+ ++ E+M GSL L S Q L +ID ++ + E + F IH D
Sbjct: 248 KEPI-YIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD 303
Query: 418 LKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDV 477
L+ +N+L+ ++V ++DFG+A+ K I + APE G + DV
Sbjct: 304 LRAANILVSASLVCKIADFGLARVGAK-----------FPIKWTAPEAINFGSFTIKSDV 352
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQ 537
+SFGI+LME T + +P M + ++
Sbjct: 353 WSFGILLMEIVTYGR-------------------IPYPGMSNPEVIRALERGYRMPRPEN 393
Query: 538 CVSFIFNLAMKCTVESPEQR 557
C ++N+ M+C PE+R
Sbjct: 394 CPEELYNIMMRCWKNRPEER 413
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 84/210 (40%), Gaps = 32/210 (15%)
Query: 361 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKP 420
D K+ + E P S SS +LD+ L++ D+A +YL + IH D+
Sbjct: 137 DLKSFLRETRPRPSQP----SSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAA 186
Query: 421 SNVLLD---DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDV 477
N LL VA + DFGMA+ + + + + +M PE EG ++ D
Sbjct: 187 RNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 246
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQ 537
+SFG++L E F+ G M N V+E V +
Sbjct: 247 WSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFVTSG------GRMDPPKN 287
Query: 538 CVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C ++ + +C PE R N I+ R+
Sbjct: 288 CPGPVYRIMTQCWQHQPEDRPNFAIILERI 317
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 95/212 (44%), Gaps = 31/212 (14%)
Query: 365 LVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVASALEYLHFGYSVPIIH 415
+++E M G L+ L S +N +L + + + + ++A + YL+ + +H
Sbjct: 96 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 152
Query: 416 CDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG 475
DL N ++ ++ + DFGM + + + D + L + +M+PE ++G +T
Sbjct: 153 RDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 212
Query: 476 DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTK 535
DV+SFG++L E T + + + L+ +++ LL + D
Sbjct: 213 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD------ 254
Query: 536 GQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C +F L C +P+ R + EI++ +
Sbjct: 255 -NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 285
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 293 GFSENNLIGRGGFGSVYKARIQDGME-VAVKVFDLQYGRAFKSFDIEC----DMXXXXXX 347
+++ +IG G FG VY+A++ D E VA+K LQ R FK+ +++ D
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKNRELQIMRKLDHCNIVRL 83
Query: 348 XXXXXXXXXXXXDDFKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
+ + LVL+Y+P + + + L + M + +L Y+
Sbjct: 84 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 143
Query: 406 H-FGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y AP
Sbjct: 144 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAP 196
Query: 464 E--YGREGQVSTNGDVYSFGIMLME 486
E +G S+ DV+S G +L E
Sbjct: 197 ELIFGATDYTSSI-DVWSAGCVLAE 220
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 84/210 (40%), Gaps = 32/210 (15%)
Query: 361 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKP 420
D K+ + E P S SS +LD+ L++ D+A +YL + IH D+
Sbjct: 146 DLKSFLRETRPRPSQP----SSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAA 195
Query: 421 SNVLLD---DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDV 477
N LL VA + DFGMA+ + + + + +M PE EG ++ D
Sbjct: 196 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 255
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQ 537
+SFG++L E F+ G M N V+E V +
Sbjct: 256 WSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFVTSG------GRMDPPKN 296
Query: 538 CVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C ++ + +C PE R N I+ R+
Sbjct: 297 CPGPVYRIMTQCWQHQPEDRPNFAIILERI 326
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 95/212 (44%), Gaps = 31/212 (14%)
Query: 365 LVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVASALEYLHFGYSVPIIH 415
+++E M G L+ L S +N +L + + + + ++A + YL+ + +H
Sbjct: 98 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 154
Query: 416 CDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG 475
DL N ++ ++ + DFGM + + + D + L + +M+PE ++G +T
Sbjct: 155 RDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 214
Query: 476 DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTK 535
DV+SFG++L E T + + + L+ +++ LL + D
Sbjct: 215 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD------ 256
Query: 536 GQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C +F L C +P+ R + EI++ +
Sbjct: 257 -NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 88/196 (44%), Gaps = 12/196 (6%)
Query: 294 FSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFDLQ-YGRAFKSFDIECDMXXXXXXXXXX 351
+ + IG GGF V A I G VA+K+ D G E +
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 352 XXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF-GYS 410
+ +VLEY P G L + S + + + R+ + + SA+ Y+H GY+
Sbjct: 72 QLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAVAYVHSQGYA 130
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGM-AKPLLKEDQSLTQTQTLATIGYMAPEYGR-E 468
H DLKP N+L D+ L DFG+ AKP +D L QT ++ Y APE + +
Sbjct: 131 ----HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHL-QT-CCGSLAYAAPELIQGK 184
Query: 469 GQVSTNGDVYSFGIML 484
+ + DV+S GI+L
Sbjct: 185 SYLGSEADVWSMGILL 200
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 84/210 (40%), Gaps = 32/210 (15%)
Query: 361 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKP 420
D K+ + E P S SS +LD+ L++ D+A +YL + IH D+
Sbjct: 160 DLKSFLRETRPRPSQP----SSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAA 209
Query: 421 SNVLLD---DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDV 477
N LL VA + DFGMA+ + + + + +M PE EG ++ D
Sbjct: 210 RNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 269
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQ 537
+SFG++L E F+ G M N V+E V +
Sbjct: 270 WSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFVTSG------GRMDPPKN 310
Query: 538 CVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C ++ + +C PE R N I+ R+
Sbjct: 311 CPGPVYRIMTQCWQHQPEDRPNFAIILERI 340
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 95/212 (44%), Gaps = 31/212 (14%)
Query: 365 LVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVASALEYLHFGYSVPIIH 415
+++E M G L+ L S +N +L + + + + ++A + YL+ + +H
Sbjct: 105 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 161
Query: 416 CDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG 475
DL N ++ ++ + DFGM + + + D + L + +M+PE ++G +T
Sbjct: 162 RDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 221
Query: 476 DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTK 535
DV+SFG++L E T + + + L+ +++ LL + D
Sbjct: 222 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD------ 263
Query: 536 GQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C +F L C +P+ R + EI++ +
Sbjct: 264 -NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 293 GFSENNLIGRGGFGSVYKARIQDGME-VAVKVFDLQYGRAFKSFDIEC----DMXXXXXX 347
+++ +IG G FG VY+A++ D E VA+K LQ R FK+ +++ D
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKNRELQIMRKLDHCNIVRL 106
Query: 348 XXXXXXXXXXXXDDFKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
+ + LVL+Y+P + + + L + M + +L Y+
Sbjct: 107 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 166
Query: 406 H-FGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y AP
Sbjct: 167 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAP 219
Query: 464 E--YGREGQVSTNGDVYSFGIMLME 486
E +G S+ DV+S G +L E
Sbjct: 220 ELIFGATDYTSSI-DVWSAGCVLAE 243
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
LV+EY+P GSL Y + + + Q L + + YLH + IH L NVL
Sbjct: 89 LVMEYVPLGSLRD--YLPRHCVGLAQLLLFAQQICEGMAYLHAQH---YIHRALAARNVL 143
Query: 425 LDDNMVAHLSDFGMAKPLLK-EDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
LD++ + + DFG+AK + + + + + + + APE +E + DV+SFG+
Sbjct: 144 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVT 203
Query: 484 LMETFT 489
L E T
Sbjct: 204 LYELLT 209
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 95/212 (44%), Gaps = 31/212 (14%)
Query: 365 LVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVASALEYLHFGYSVPIIH 415
+++E M G L+ L S +N +L + + + + ++A + YL+ + +H
Sbjct: 105 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 161
Query: 416 CDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG 475
DL N ++ ++ + DFGM + + + D + L + +M+PE ++G +T
Sbjct: 162 RDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 221
Query: 476 DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTK 535
DV+SFG++L E T + + + L+ +++ LL + D
Sbjct: 222 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD------ 263
Query: 536 GQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C +F L C +P+ R + EI++ +
Sbjct: 264 -NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 293 GFSENNLIGRGGFGSVYKARIQDGME-VAVKVFDLQYGRAFKSFDIEC----DMXXXXXX 347
+++ +IG G FG VY+A++ D E VA+K LQ R FK+ +++ D
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKNRELQIMRKLDHCNIVRL 112
Query: 348 XXXXXXXXXXXXDDFKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
+ + LVL+Y+P + + + L + M + +L Y+
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 406 H-FGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y AP
Sbjct: 173 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAP 225
Query: 464 E--YGREGQVSTNGDVYSFGIMLME 486
E +G S+ DV+S G +L E
Sbjct: 226 ELIFGATDYTSSI-DVWSAGCVLAE 249
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 85/213 (39%), Gaps = 41/213 (19%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
L Y P + E+ L S + + +Q VA +EYL S IH DL NV
Sbjct: 173 GLEYSYNPSHNPEEQLSSKDLVSCAYQ-------VARGMEYLA---SKKCIHRDLAARNV 222
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ ++ V ++DFG+A+ + D T + +MAPE + + DV+SFG++
Sbjct: 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 282
Query: 484 LMETFTRKK------PTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQ 537
L E FT P +E+F L ++
Sbjct: 283 LWEIFTLGGSPYPGVPVEELF-------------------------KLLKEGHRMDKPSN 317
Query: 538 CVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
C + ++ + C P QR K++V L +I
Sbjct: 318 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 21/204 (10%)
Query: 294 FSENNLIGRGGFGSVYKARIQDGME-VAVKVFDLQYGRAFKSFDIEC----DMXXXXXXX 348
+++ +IG G FG VY+A++ D E VA+K LQ R FK+ +++ D
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKNRELQIMRKLDHCNIVRLR 117
Query: 349 XXXXXXXXXXXDDFKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYLH 406
+ + LVL+Y+P + + + L + M + +L Y+H
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 177
Query: 407 -FGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE 464
FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y APE
Sbjct: 178 SFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 230
Query: 465 --YGREGQVSTNGDVYSFGIMLME 486
+G S+ DV+S G +L E
Sbjct: 231 LIFGATDYTSSI-DVWSAGCVLAE 253
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 84/210 (40%), Gaps = 32/210 (15%)
Query: 361 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKP 420
D K+ + E P S SS +LD+ L++ D+A +YL + IH D+
Sbjct: 120 DLKSFLRETRPRPSQP----SSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAA 169
Query: 421 SNVLLD---DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDV 477
N LL VA + DFGMA+ + + + + +M PE EG ++ D
Sbjct: 170 RNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 229
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQ 537
+SFG++L E F+ G M N V+E V +
Sbjct: 230 WSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFVTSG------GRMDPPKN 270
Query: 538 CVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C ++ + +C PE R N I+ R+
Sbjct: 271 CPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
LV+EY+P GSL Y + + + Q L + + YLH + IH L NVL
Sbjct: 90 LVMEYVPLGSLRD--YLPRHCVGLAQLLLFAQQICEGMAYLHAQH---YIHRALAARNVL 144
Query: 425 LDDNMVAHLSDFGMAKPLLK-EDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
LD++ + + DFG+AK + + + + + + + APE +E + DV+SFG+
Sbjct: 145 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVT 204
Query: 484 LMETFT 489
L E T
Sbjct: 205 LYELLT 210
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 293 GFSENNLIGRGGFGSVYKARIQDGME-VAVKVFDLQYGRAFKSFDIEC----DMXXXXXX 347
+++ +IG G FG VY+A++ D E VA+K LQ R FK+ +++ D
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKNRELQIMRKLDHCNIVRL 114
Query: 348 XXXXXXXXXXXXDDFKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
+ + LVL+Y+P + + + L + M + +L Y+
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 174
Query: 406 H-FGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y AP
Sbjct: 175 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAP 227
Query: 464 E--YGREGQVSTNGDVYSFGIMLME 486
E +G S+ DV+S G +L E
Sbjct: 228 ELIFGATDYTSSI-DVWSAGCVLAE 251
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 26/214 (12%)
Query: 301 GRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKS-FDIEC--DMXXXXXXXXXXXXXXXX 357
RG FG V+KA++ + VAVK+F +Q +++++ +++ M
Sbjct: 33 ARGRFGCVWKAQLLNEY-VAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGT 91
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF-------GYS 410
D L+ + GSL L ++ ++ + +I +A L YLH G+
Sbjct: 92 SVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHK 149
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG---YMAPEYGR 467
I H D+K NVLL +N+ A ++DFG+A LK + + T +G YMAPE
Sbjct: 150 PAISHRDIKSKNVLLKNNLTACIADFGLA---LKFEAGKSAGDTHGQVGTRRYMAPEV-L 205
Query: 468 EGQVSTNG------DVYSFGIMLMETFTRKKPTD 495
EG ++ D+Y+ G++L E +R D
Sbjct: 206 EGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 6/127 (4%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
LV+EY+P GSL Y + + + Q L + + YLH + IH +L NVL
Sbjct: 95 LVMEYVPLGSLRD--YLPRHSIGLAQLLLFAQQICEGMAYLHAQH---YIHRNLAARNVL 149
Query: 425 LDDNMVAHLSDFGMAKPLLK-EDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
LD++ + + DFG+AK + + + + + + + APE +E + DV+SFG+
Sbjct: 150 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVT 209
Query: 484 LMETFTR 490
L E T
Sbjct: 210 LYELLTH 216
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 85/213 (39%), Gaps = 41/213 (19%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
L Y P + E+ L S + + +Q VA +EYL S IH DL NV
Sbjct: 124 GLEYSYNPSHNPEEQLSSKDLVSCAYQ-------VARGMEYLA---SKKCIHRDLAARNV 173
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ ++ V ++DFG+A+ + D T + +MAPE + + DV+SFG++
Sbjct: 174 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 233
Query: 484 LMETFTRKK------PTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQ 537
L E FT P +E+F L ++
Sbjct: 234 LWEIFTLGGSPYPGVPVEELF-------------------------KLLKEGHRMDKPSN 268
Query: 538 CVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
C + ++ + C P QR K++V L +I
Sbjct: 269 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 85/213 (39%), Gaps = 41/213 (19%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
L Y P + E+ L S + + +Q VA +EYL S IH DL NV
Sbjct: 132 GLEYSYNPSHNPEEQLSSKDLVSCAYQ-------VARGMEYLA---SKKCIHRDLAARNV 181
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ ++ V ++DFG+A+ + D T + +MAPE + + DV+SFG++
Sbjct: 182 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 241
Query: 484 LMETFTRKK------PTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQ 537
L E FT P +E+F L ++
Sbjct: 242 LWEIFTLGGSPYPGVPVEELF-------------------------KLLKEGHRMDKPSN 276
Query: 538 CVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
C + ++ + C P QR K++V L +I
Sbjct: 277 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 85/213 (39%), Gaps = 41/213 (19%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
L Y P + E+ L S + + +Q VA +EYL S IH DL NV
Sbjct: 125 GLEYSYNPSHNPEEQLSSKDLVSCAYQ-------VARGMEYLA---SKKCIHRDLAARNV 174
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ ++ V ++DFG+A+ + D T + +MAPE + + DV+SFG++
Sbjct: 175 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 234
Query: 484 LMETFTRKK------PTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQ 537
L E FT P +E+F L ++
Sbjct: 235 LWEIFTLGGSPYPGVPVEELF-------------------------KLLKEGHRMDKPSN 269
Query: 538 CVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
C + ++ + C P QR K++V L +I
Sbjct: 270 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 21/204 (10%)
Query: 294 FSENNLIGRGGFGSVYKARIQDGME-VAVKVFDLQYGRAFKSFDIEC----DMXXXXXXX 348
+++ +IG G FG VY+A++ D E VA+K LQ R FK+ +++ D
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKNRELQIMRKLDHCNIVRLR 158
Query: 349 XXXXXXXXXXXDDFKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYLH 406
+ + LVL+Y+P + + + L + M + +L Y+H
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 407 -FGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE 464
FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y APE
Sbjct: 219 SFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 271
Query: 465 --YGREGQVSTNGDVYSFGIMLME 486
+G S+ DV+S G +L E
Sbjct: 272 LIFGATDYTSSI-DVWSAGCVLAE 294
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 41/208 (19%)
Query: 369 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN 428
Y P + E+ L S + + +Q VA +EYL S IH DL NVL+ ++
Sbjct: 137 YNPSHNPEEQLSSKDLVSCAYQ-------VARGMEYLA---SKKCIHRDLAARNVLVTED 186
Query: 429 MVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETF 488
V ++DFG+A+ + D T + +MAPE + + DV+SFG++L E F
Sbjct: 187 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246
Query: 489 TRKK------PTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFI 542
T P +E+F L ++ C + +
Sbjct: 247 TLGGSPYPGVPVEELF-------------------------KLLKEGHRMDKPSNCTNEL 281
Query: 543 FNLAMKCTVESPEQRINAKEIVTRLLKI 570
+ + C P QR K++V L +I
Sbjct: 282 YMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 85/213 (39%), Gaps = 41/213 (19%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
L + P + E+ L S + + +Q VA +EYL S IH DL NV
Sbjct: 132 GLEFSFNPSHNPEEQLSSKDLVSCAYQ-------VARGMEYL---ASKKCIHRDLAARNV 181
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ ++ V ++DFG+A+ + D T + +MAPE + + DV+SFG++
Sbjct: 182 LVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 241
Query: 484 LMETFTRKK------PTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQ 537
L E FT P +E+F L ++
Sbjct: 242 LWEIFTLGGSPYPGVPVEELF-------------------------KLLKEGHRMDKPSN 276
Query: 538 CVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
C + ++ + C P QR K++V L +I
Sbjct: 277 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 85/213 (39%), Gaps = 41/213 (19%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
L Y P + E+ L S + + +Q VA +EYL S IH DL NV
Sbjct: 132 GLEYSYNPSHNPEEQLSSKDLVSCAYQ-------VARGMEYLA---SKKCIHRDLAARNV 181
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ ++ V ++DFG+A+ + D T + +MAPE + + DV+SFG++
Sbjct: 182 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 241
Query: 484 LMETFTRKK------PTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQ 537
L E FT P +E+F L ++
Sbjct: 242 LWEIFTLGGSPYPGVPVEELF-------------------------KLLKEGHRMDKPSN 276
Query: 538 CVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
C + ++ + C P QR K++V L +I
Sbjct: 277 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 85/213 (39%), Gaps = 41/213 (19%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
L Y P + E+ L S + + +Q VA +EYL S IH DL NV
Sbjct: 121 GLEYSYNPSHNPEEQLSSKDLVSCAYQ-------VARGMEYLA---SKKCIHRDLAARNV 170
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ ++ V ++DFG+A+ + D T + +MAPE + + DV+SFG++
Sbjct: 171 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 230
Query: 484 LMETFTRKK------PTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQ 537
L E FT P +E+F L ++
Sbjct: 231 LWEIFTLGGSPYPGVPVEELF-------------------------KLLKEGHRMDKPSN 265
Query: 538 CVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
C + ++ + C P QR K++V L +I
Sbjct: 266 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 298
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 25/210 (11%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRA-FKSFDIECDMXXXXXXXXXXXXXXXXX 358
IG+G FG V++ + + G EVAVK+F + R+ F+ +I +
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 108
Query: 359 XDDFKALVL--EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY-----SV 411
+ L L +Y HGSL Y + Y + + + + + AS L +LH
Sbjct: 109 NGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 166
Query: 412 PIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS-----LTQTQTLATIGYMAPEY- 465
I H DLK N+L+ N ++D G+A ++ D + + + T YMAPE
Sbjct: 167 AIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYMAPEVL 223
Query: 466 -----GREGQVSTNGDVYSFGIMLMETFTR 490
+ + D+Y+ G++ E R
Sbjct: 224 DDSINMKHFESFKRADIYAMGLVFWEIARR 253
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
LV+E G L K L + ++ D + ++ V+ ++YL +H DL NVL
Sbjct: 88 LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVL 143
Query: 425 LDDNMVAHLSDFGMAKPL-LKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L A +SDFG++K L E+ QT + + APE + S+ DV+SFG++
Sbjct: 144 LVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVL 203
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
+ E F+ +G P M+ + + +K E C ++
Sbjct: 204 MWEAFS---------YGQK----------PYRGMKGSEVTAMLEKGERMGCPAGCPREMY 244
Query: 544 NLAMKCTVESPEQRINAKEIVTRL 567
+L C E R + RL
Sbjct: 245 DLMNLCWTYDVENRPGFAAVELRL 268
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 41/208 (19%)
Query: 369 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN 428
Y P + E+ L S + + +Q VA +EYL S IH DL NVL+ ++
Sbjct: 122 YNPSHNPEEQLSSKDLVSCAYQ-------VARGMEYLA---SKKCIHRDLAARNVLVTED 171
Query: 429 MVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETF 488
V ++DFG+A+ + D T + +MAPE + + DV+SFG++L E F
Sbjct: 172 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 231
Query: 489 TRKK------PTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFI 542
T P +E+F L ++ C + +
Sbjct: 232 TLGGSPYPGVPVEELF-------------------------KLLKEGHRMDKPSNCTNEL 266
Query: 543 FNLAMKCTVESPEQRINAKEIVTRLLKI 570
+ + C P QR K++V L +I
Sbjct: 267 YMMMRDCWHAVPSQRPTFKQLVEDLDRI 294
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 25/210 (11%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRA-FKSFDIECDMXXXXXXXXXXXXXXXXX 358
IG+G FG V++ + + G EVAVK+F + R+ F+ +I +
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 95
Query: 359 XDDFKALVL--EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY-----SV 411
+ L L +Y HGSL Y + Y + + + + + AS L +LH
Sbjct: 96 NGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 153
Query: 412 PIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS-----LTQTQTLATIGYMAPEY- 465
I H DLK N+L+ N ++D G+A ++ D + + + T YMAPE
Sbjct: 154 AIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYMAPEVL 210
Query: 466 -----GREGQVSTNGDVYSFGIMLMETFTR 490
+ + D+Y+ G++ E R
Sbjct: 211 DDSINMKHFESFKRADIYAMGLVFWEIARR 240
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD 427
E++P+ + LY L + + VA +E+L S IH DL N+LL +
Sbjct: 120 EFVPYKVAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 174
Query: 428 NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMET 487
V + DFG+A+ + K+ + + + +MAPE + + DV+SFG++L E
Sbjct: 175 KNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
Query: 488 FT 489
F+
Sbjct: 235 FS 236
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 25/210 (11%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRA-FKSFDIECDMXXXXXXXXXXXXXXXXX 358
IG+G FG V++ + + G EVAVK+F + R+ F+ +I +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 69
Query: 359 XDDFKALVL--EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY-----SV 411
+ L L +Y HGSL Y + Y + + + + + AS L +LH
Sbjct: 70 NGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 127
Query: 412 PIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS-----LTQTQTLATIGYMAPEY- 465
I H DLK N+L+ N ++D G+A ++ D + + + T YMAPE
Sbjct: 128 AIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYMAPEVL 184
Query: 466 -----GREGQVSTNGDVYSFGIMLMETFTR 490
+ + D+Y+ G++ E R
Sbjct: 185 DDSINMKHFESFKRADIYAMGLVFWEIARR 214
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 26/205 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
LV+E G L K L + ++ D + ++ V+ ++YL +H DL NVL
Sbjct: 82 LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVL 137
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMAPEYGREGQVSTNGDVYSFGI 482
L A +SDFG++K L+ D++ + QT + + APE + S+ DV+SFG+
Sbjct: 138 LVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGV 196
Query: 483 MLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFI 542
++ E F+ +G P M+ + + +K E C +
Sbjct: 197 LMWEAFS---------YGQK----------PYRGMKGSEVTAMLEKGERMGCPAGCPREM 237
Query: 543 FNLAMKCTVESPEQRINAKEIVTRL 567
++L C E R + RL
Sbjct: 238 YDLMNLCWTYDVENRPGFAAVELRL 262
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 8/132 (6%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
LV+E G L K L + ++ D + ++ V+ ++YL +H DL NVL
Sbjct: 84 LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVL 139
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMAPEYGREGQVSTNGDVYSFGI 482
L A +SDFG++K L+ D++ + QT + + APE + S+ DV+SFG+
Sbjct: 140 LVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGV 198
Query: 483 MLMETFTR-KKP 493
++ E F+ +KP
Sbjct: 199 LMWEAFSYGQKP 210
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD 427
E++P+ + LY L + + VA +E+L S IH DL N+LL +
Sbjct: 120 EFVPYKVAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 174
Query: 428 NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMET 487
V + DFG+A+ + K+ + + + +MAPE + + DV+SFG++L E
Sbjct: 175 KNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
Query: 488 FT 489
F+
Sbjct: 235 FS 236
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
LV+E G L K L + ++ D + ++ V+ ++YL +H DL NVL
Sbjct: 446 LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVL 501
Query: 425 LDDNMVAHLSDFGMAKPL-LKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L A +SDFG++K L E+ QT + + APE + S+ DV+SFG++
Sbjct: 502 LVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVL 561
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
+ E F+ +G P M+ + + +K E C ++
Sbjct: 562 MWEAFS---------YGQK----------PYRGMKGSEVTAMLEKGERMGCPAGCPREMY 602
Query: 544 NLAMKCTVESPEQRINAKEIVTRL 567
+L C E R + RL
Sbjct: 603 DLMNLCWTYDVENRPGFAAVELRL 626
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 25/210 (11%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRA-FKSFDIECDMXXXXXXXXXXXXXXXXX 358
IG+G FG V++ + + G EVAVK+F + R+ F+ +I +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 70
Query: 359 XDDFKALVL--EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY-----SV 411
+ L L +Y HGSL Y + Y + + + + + AS L +LH
Sbjct: 71 NGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 128
Query: 412 PIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS-----LTQTQTLATIGYMAPEY- 465
I H DLK N+L+ N ++D G+A ++ D + + + T YMAPE
Sbjct: 129 AIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYMAPEVL 185
Query: 466 -----GREGQVSTNGDVYSFGIMLMETFTR 490
+ + D+Y+ G++ E R
Sbjct: 186 DDSINMKHFESFKRADIYAMGLVFWEIARR 215
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 25/210 (11%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRA-FKSFDIECDMXXXXXXXXXXXXXXXXX 358
IG+G FG V++ + + G EVAVK+F + R+ F+ +I +
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 75
Query: 359 XDDFKALVL--EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY-----SV 411
+ L L +Y HGSL Y + Y + + + + + AS L +LH
Sbjct: 76 NGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 133
Query: 412 PIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS-----LTQTQTLATIGYMAPEY- 465
I H DLK N+L+ N ++D G+A ++ D + + + T YMAPE
Sbjct: 134 AIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYMAPEVL 190
Query: 466 -----GREGQVSTNGDVYSFGIMLMETFTR 490
+ + D+Y+ G++ E R
Sbjct: 191 DDSINMKHFESFKRADIYAMGLVFWEIARR 220
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 26/205 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
LV+E G L K L + ++ D + ++ V+ ++YL +H DL NVL
Sbjct: 447 LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVL 502
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMAPEYGREGQVSTNGDVYSFGI 482
L A +SDFG++K L+ D++ + QT + + APE + S+ DV+SFG+
Sbjct: 503 LVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGV 561
Query: 483 MLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFI 542
++ E F+ +G P M+ + + +K E C +
Sbjct: 562 LMWEAFS---------YGQK----------PYRGMKGSEVTAMLEKGERMGCPAGCPREM 602
Query: 543 FNLAMKCTVESPEQRINAKEIVTRL 567
++L C E R + RL
Sbjct: 603 YDLMNLCWTYDVENRPGFAAVELRL 627
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
LV+E G L K L + ++ D + ++ V+ ++YL +H DL NVL
Sbjct: 88 LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVL 143
Query: 425 LDDNMVAHLSDFGMAKPL-LKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L A +SDFG++K L E+ QT + + APE + S+ DV+SFG++
Sbjct: 144 LVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVL 203
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
+ E F+ +G P M+ + + +K E C ++
Sbjct: 204 MWEAFS---------YGQK----------PYRGMKGSEVTAMLEKGERMGCPAGCPREMY 244
Query: 544 NLAMKCTVESPEQRINAKEIVTRL 567
+L C E R + RL
Sbjct: 245 DLMNLCWTYDVENRPGFAAVELRL 268
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
+V EYMP+G+L L N + L + ++SA+EYL IH DL N
Sbjct: 105 IVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 161
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N V ++DFG+++ L+ D I + APE S DV++FG++
Sbjct: 162 LVGENHVVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVL 220
Query: 484 LMETFT 489
L E T
Sbjct: 221 LWEIAT 226
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD 427
E++P+ + LY L + + VA +E+L S IH DL N+LL +
Sbjct: 131 EFVPYKEAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 185
Query: 428 NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMET 487
V + DFG+A+ + K+ + + + +MAPE + + DV+SFG++L E
Sbjct: 186 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 245
Query: 488 FT 489
F+
Sbjct: 246 FS 247
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 25/210 (11%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRA-FKSFDIECDMXXXXXXXXXXXXXXXXX 358
IG+G FG V++ + + G EVAVK+F + R+ F+ +I +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 72
Query: 359 XDDFKALVL--EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY-----SV 411
+ L L +Y HGSL Y + Y + + + + + AS L +LH
Sbjct: 73 NGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 130
Query: 412 PIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS-----LTQTQTLATIGYMAPEY- 465
I H DLK N+L+ N ++D G+A ++ D + + + T YMAPE
Sbjct: 131 AIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYMAPEVL 187
Query: 466 -----GREGQVSTNGDVYSFGIMLMETFTR 490
+ + D+Y+ G++ E R
Sbjct: 188 DDSINMKHFESFKRADIYAMGLVFWEIARR 217
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD 427
E++P+ + LY L + + VA +E+L S IH DL N+LL +
Sbjct: 129 EFVPYKVAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 183
Query: 428 NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMET 487
V + DFG+A+ + K+ + + + +MAPE + + DV+SFG++L E
Sbjct: 184 KNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
Query: 488 FT 489
F+
Sbjct: 244 FS 245
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD 427
E++P+ + LY L + + VA +E+L S IH DL N+LL +
Sbjct: 129 EFVPYKVAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 183
Query: 428 NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMET 487
V + DFG+A+ + K+ + + + +MAPE + + DV+SFG++L E
Sbjct: 184 KNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
Query: 488 FT 489
F+
Sbjct: 244 FS 245
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 7/127 (5%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
LV+E G L K L + ++ D + ++ V+ ++YL +H DL NVL
Sbjct: 94 LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVL 149
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMAPEYGREGQVSTNGDVYSFGI 482
L A +SDFG++K L+ D++ + QT + + APE + S+ DV+SFG+
Sbjct: 150 LVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGV 208
Query: 483 MLMETFT 489
++ E F+
Sbjct: 209 LMWEAFS 215
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 306 GSVYKARIQDGMEVAVKVFDLQ--YGRAFKSFDIECDMXXXXXXXXXXXX--XXXXXXDD 361
G ++K R Q G ++ VKV ++ R + F+ EC
Sbjct: 24 GELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 362 FKALVLEYMPHGSLEKCLYS-SNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKP 420
L+ +MP+GSL L+ +N+++D Q + +D+A + +LH + H L
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHA-LNS 141
Query: 421 SNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTN---GDV 477
+V++D++M A +S + S + ++APE ++ TN D+
Sbjct: 142 RSVMIDEDMTARIS-------MADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADM 194
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMT 503
+SF ++L E TR E+ F D++
Sbjct: 195 WSFAVLLWELVTR-----EVPFADLS 215
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
LV+E G L K L + ++ D + ++ V+ ++YL +H DL NVL
Sbjct: 102 LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVL 157
Query: 425 LDDNMVAHLSDFGMAKPL-LKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L A +SDFG++K L E+ QT + + APE + S+ DV+SFG++
Sbjct: 158 LVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVL 217
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
+ E F+ +G P M+ + + +K E C ++
Sbjct: 218 MWEAFS---------YGQK----------PYRGMKGSEVTAMLEKGERMGCPAGCPREMY 258
Query: 544 NLAMKCTVESPEQRINAKEIVTRL 567
+L C E R + RL
Sbjct: 259 DLMNLCWTYDVENRPGFAAVELRL 282
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 111/284 (39%), Gaps = 38/284 (13%)
Query: 300 IGRGGFGSVYKARIQDGME------VAVKVFDLQYG-RAFKSFDIECDMXXXXXXXXXXX 352
+G+G FG VY+ +D ++ VAVK + R F E +
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 353 XXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILD---------IFQRLNIMIDVASALE 403
+V+E M HG L+ L S + + + + + ++A +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 404 YLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
YL+ + +H +L N ++ + + DFGM + + + D + L + +MAP
Sbjct: 146 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 464 EYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDAN 523
E ++G +T+ D++SFG++L E + + + + LK ++D
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 250
Query: 524 LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
L Q D C + +L C +P R EIV L
Sbjct: 251 YLDQPD-------NCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 287
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 92/195 (47%), Gaps = 8/195 (4%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGR-AFKSFDIECDMXXXXXXXXXXXXXXXXX 358
+G G FG V+ + +VAVK L+ G + ++F E ++
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKT--LKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 359 XDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL-NIMIDVASALEYLHFGYSVPIIHCD 417
++ ++ E+M GSL L S + +L + +A + Y+ IH D
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRD 134
Query: 418 LKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDV 477
L+ +NVL+ ++++ ++DFG+A+ ++++++ + I + APE G + +V
Sbjct: 135 LRAANVLVSESLMCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNV 193
Query: 478 YSFGIMLMETFTRKK 492
+SFGI+L E T K
Sbjct: 194 WSFGILLYEIVTYGK 208
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 94/212 (44%), Gaps = 31/212 (14%)
Query: 365 LVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVASALEYLHFGYSVPIIH 415
+++E M G L+ L S +N +L + + + + ++A + YL+ + +H
Sbjct: 90 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 146
Query: 416 CDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG 475
DL N ++ ++ + DFGM + + + D + L + +M+PE ++G +T
Sbjct: 147 RDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYS 206
Query: 476 DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTK 535
DV+SFG++L E T + + + L+ +++ LL + D
Sbjct: 207 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD------ 248
Query: 536 GQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C + L C +P+ R + EI++ +
Sbjct: 249 -NCPDMLLELMRMCWQYNPKMRPSFLEIISSI 279
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD 427
E++P+ + LY L + + VA +E+L S IH DL N+LL +
Sbjct: 120 EFVPYKVAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 174
Query: 428 NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMET 487
V + DFG+A+ + K+ + + + +MAPE + + DV+SFG++L E
Sbjct: 175 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
Query: 488 FT 489
F+
Sbjct: 235 FS 236
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD 427
E++P+ + LY L + + VA +E+L S IH DL N+LL +
Sbjct: 120 EFVPYKVAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 174
Query: 428 NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMET 487
V + DFG+A+ + K+ + + + +MAPE + + DV+SFG++L E
Sbjct: 175 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
Query: 488 FT 489
F+
Sbjct: 235 FS 236
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
LV+E G L K L + ++ D + ++ V+ ++YL +H DL NVL
Sbjct: 104 LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVL 159
Query: 425 LDDNMVAHLSDFGMAKPL-LKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L A +SDFG++K L E+ QT + + APE + S+ DV+SFG++
Sbjct: 160 LVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVL 219
Query: 484 LMETFT 489
+ E F+
Sbjct: 220 MWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
LV+E G L K L + ++ D + ++ V+ ++YL +H DL NVL
Sbjct: 104 LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVL 159
Query: 425 LDDNMVAHLSDFGMAKPL-LKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L A +SDFG++K L E+ QT + + APE + S+ DV+SFG++
Sbjct: 160 LVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVL 219
Query: 484 LMETFT 489
+ E F+
Sbjct: 220 MWEAFS 225
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD 427
E++P+ + LY L + + VA +E+L S IH DL N+LL +
Sbjct: 129 EFVPYKVAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 183
Query: 428 NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMET 487
V + DFG+A+ + K+ + + + +MAPE + + DV+SFG++L E
Sbjct: 184 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
Query: 488 FT 489
F+
Sbjct: 244 FS 245
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 111/284 (39%), Gaps = 38/284 (13%)
Query: 300 IGRGGFGSVYKARIQDGME------VAVKVFDLQYG-RAFKSFDIECDMXXXXXXXXXXX 352
+G+G FG VY+ +D ++ VAVK + R F E +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 353 XXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILD---------IFQRLNIMIDVASALE 403
+V+E M HG L+ L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 404 YLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
YL+ + +H +L N ++ + + DFGM + + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 464 EYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDAN 523
E ++G +T+ D++SFG++L E + + + + LK ++D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 249
Query: 524 LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
L Q D C + +L C +P R EIV L
Sbjct: 250 YLDQPD-------NCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 293 GFSENNLIGRGGFGSVYKARIQDGME-VAVKVFDLQYGRAFKSFDIEC----DMXXXXXX 347
+++ +IG G FG VY+A++ D E VA+K LQ R FK+ +++ D
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FKNRELQIMRKLDHCNIVRL 78
Query: 348 XXXXXXXXXXXXDDFKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
+ LVL+Y+P + + + L + M + +L Y+
Sbjct: 79 RYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 406 H-FGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y AP
Sbjct: 139 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRAP 191
Query: 464 E--YGREGQVSTNGDVYSFGIMLME 486
E +G S+ DV+S G +L E
Sbjct: 192 ELIFGATDYTSSI-DVWSAGCVLAE 215
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD 427
E++P+ + LY L + + VA +E+L S IH DL N+LL +
Sbjct: 166 EFVPYKVAPEDLYKD--FLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSE 220
Query: 428 NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMET 487
V + DFG+A+ + K+ + + + +MAPE + + DV+SFG++L E
Sbjct: 221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 280
Query: 488 FT 489
F+
Sbjct: 281 FS 282
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
++++Y+ G L L S + + +V ALEYLH S II+ DLKP N+L
Sbjct: 83 MIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLH---SKDIIYRDLKPENIL 138
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
LD N ++DFG AK + L T Y+APE + + D +SFGI++
Sbjct: 139 LDKNGHIKITDFGFAKYVPDVTYXLC-----GTPDYIAPEVVSTKPYNKSIDWWSFGILI 193
Query: 485 METFTRKKPTDEIFFGDMTLK 505
E P F+ T+K
Sbjct: 194 YEMLAGYTP----FYDSNTMK 210
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Query: 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD 427
E++P+ + E LY L + + VA +E+L S IH DL N+LL +
Sbjct: 130 EFVPYKTPED-LYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 183
Query: 428 NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMET 487
V + DFG+A+ + K+ + + + +MAPE + + DV+SFG++L E
Sbjct: 184 KNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
Query: 488 FT 489
F+
Sbjct: 244 FS 245
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 121/297 (40%), Gaps = 32/297 (10%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVF-DLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXX 358
IG+G +G V+ + + G +VAVKVF + F+ +I +
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKG 103
Query: 359 XDDFKALVL--EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFG-YSV---- 411
+ L L +Y +GSL L S+ LD L + S L +LH +S
Sbjct: 104 TGSWTQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKP 161
Query: 412 PIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE--DQSLTQTQTLATIGYMAPEYGREG 469
I H DLK N+L+ N ++D G+A + + + + + T YM PE E
Sbjct: 162 AIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDES 221
Query: 470 ------QVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWV--NDLLPI-----SV 516
Q D+YSFG++L E R G + ++ + +DL+P +
Sbjct: 222 LNRNHFQSYIMADMYSFGLILWEVARR------CVSGGIVEEYQLPYHDLVPSDPSYEDM 275
Query: 517 MEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDS 573
EIV L + + +C+ + L +C +P R+ A + L K+ +S
Sbjct: 276 REIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 34/179 (18%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
+A +EYL S IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 166 LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLP 222
Query: 458 IGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKK------PTDEIFFGDMTLKHWVNDL 511
+ +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------------- 269
Query: 512 LPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
L ++ C + ++ + C P QR K++V L +I
Sbjct: 270 ------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 34/179 (18%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
+A +EYL S IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 166 LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLP 222
Query: 458 IGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKK------PTDEIFFGDMTLKHWVNDL 511
+ +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------------- 269
Query: 512 LPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
L ++ C + ++ + C P QR K++V L +I
Sbjct: 270 ------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 111/284 (39%), Gaps = 38/284 (13%)
Query: 300 IGRGGFGSVYKARIQDGME------VAVKVFDLQYG-RAFKSFDIECDMXXXXXXXXXXX 352
+G+G FG VY+ +D ++ VAVK + R F E +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 353 XXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILD---------IFQRLNIMIDVASALE 403
+V+E M HG L+ L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 404 YLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
YL+ + +H DL N ++ + + DFGM + + + + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 464 EYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDAN 523
E ++G +T+ D++SFG++L E + + + + LK ++D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 249
Query: 524 LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
L Q D C + +L C +P+ R EIV L
Sbjct: 250 YLDQPD-------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 11/123 (8%)
Query: 368 EYMPHGSLEKCLYSSNYILDI-FQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD 426
E++P+ L K + +++ FQ VA +E+L S IH DL N+LL
Sbjct: 129 EFVPYKDLYKDFLTLEHLIXYSFQ-------VAKGMEFL---ASRKXIHRDLAARNILLS 178
Query: 427 DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLME 486
+ V + DFG+A+ + K+ + + + +MAPE + + DV+SFG++L E
Sbjct: 179 EKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 238
Query: 487 TFT 489
F+
Sbjct: 239 IFS 241
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 17/205 (8%)
Query: 300 IGRGGFGSVYKARIQ-DGMEVAVK----VFDL--QYGRAFKSFDIECDMXXXXXXXXXXX 352
IG G +G V AR + G +VA+K FD+ R + I
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 353 XXXXXXXDDFKAL--VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
+FK++ VL+ M L + ++SS L + + + L+Y+H S
Sbjct: 122 LRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH---S 176
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE--DQSLTQTQTLATIGYMAPEYGRE 468
+IH DLKPSN+L+++N + DFGMA+ L + T+ +AT Y APE
Sbjct: 177 AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLS 236
Query: 469 GQVSTNG-DVYSFGIMLMETFTRKK 492
T D++S G + E R++
Sbjct: 237 LHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 91/227 (40%), Gaps = 49/227 (21%)
Query: 365 LVLEYMPHGSLEKCLYSS-----NYILDI---------FQRL-NIMIDVASALEYLHFGY 409
+++EY G+L + L + Y DI F+ L + +A +EYL
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA--- 174
Query: 410 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG 469
S IH DL NVL+ +N V ++DFG+A+ + D T + +MAPE +
Sbjct: 175 SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 470 QVSTNGDVYSFGIMLMETFTRKK------PTDEIFFGDMTLKHWVNDLLPISVMEIVDAN 523
+ DV+SFG+++ E FT P +E+F
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------------------------- 269
Query: 524 LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
L ++ C + ++ + C P QR K++V L +I
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
VA +E+L S IH DL N+LL + V + DFG+A+ + K+ + +
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 458 IGYMAPEYGREGQVSTNGDVYSFGIMLMETFT 489
+ +MAPE + + DV+SFG++L E F+
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
VA +E+L S IH DL N+LL + V + DFG+A+ + K+ + +
Sbjct: 202 VAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 458 IGYMAPEYGREGQVSTNGDVYSFGIMLMETFT 489
+ +MAPE + + DV+SFG++L E F+
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 26/196 (13%)
Query: 365 LVLEYMPHGSLEKCL--YSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSN 422
+V E P GSL L + +++L R + VA + YL S IH DL N
Sbjct: 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARN 151
Query: 423 VLLDDNMVAHLSDFGMAKPLLK-EDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFG 481
+LL + + DFG+ + L + +D + Q + APE + S D + FG
Sbjct: 152 LLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 211
Query: 482 IMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSF 541
+ L E FT +G + W+ L ++ +D ++ E C
Sbjct: 212 VTLWEMFT---------YGQ---EPWIG-LNGSQILHKID-----KEGERLPRPEDCPQD 253
Query: 542 IFNLAMKCTVESPEQR 557
I+N+ ++C PE R
Sbjct: 254 IYNVMVQCWAHKPEDR 269
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
VA +E+L S IH DL N+LL + V + DFG+A+ + K+ + +
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 458 IGYMAPEYGREGQVSTNGDVYSFGIMLMETFT 489
+ +MAPE + + DV+SFG++L E F+
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 34/179 (18%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
+A +EYL S IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 166 LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLP 222
Query: 458 IGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKK------PTDEIFFGDMTLKHWVNDL 511
+ +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------------- 269
Query: 512 LPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
L ++ C + ++ + C P QR K++V L +I
Sbjct: 270 ------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
VA +E+L S IH DL N+LL + V + DFG+A+ + K+ + +
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 458 IGYMAPEYGREGQVSTNGDVYSFGIMLMETFT 489
+ +MAPE + + DV+SFG++L E F+
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 26/196 (13%)
Query: 365 LVLEYMPHGSLEKCL--YSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSN 422
+V E P GSL L + +++L R + VA + YL S IH DL N
Sbjct: 87 MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARN 141
Query: 423 VLLDDNMVAHLSDFGMAKPLLK-EDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFG 481
+LL + + DFG+ + L + +D + Q + APE + S D + FG
Sbjct: 142 LLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 201
Query: 482 IMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSF 541
+ L E FT +G + W+ L ++ +D ++ E C
Sbjct: 202 VTLWEMFT---------YGQ---EPWIG-LNGSQILHKID-----KEGERLPRPEDCPQD 243
Query: 542 IFNLAMKCTVESPEQR 557
I+N+ ++C PE R
Sbjct: 244 IYNVMVQCWAHKPEDR 259
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 34/179 (18%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
+A +EYL S IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 166 LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 458 IGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKK------PTDEIFFGDMTLKHWVNDL 511
+ +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------------- 269
Query: 512 LPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
L ++ C + ++ + C P QR K++V L +I
Sbjct: 270 ------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
VA +E+L S IH DL N+LL + V + DFG+A+ + K+ + +
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 458 IGYMAPEYGREGQVSTNGDVYSFGIMLMETFT 489
+ +MAPE + + DV+SFG++L E F+
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 86/220 (39%), Gaps = 33/220 (15%)
Query: 300 IGRGGFGSVYKARIQDGME------VAVKVFDLQYGRAFKS-FDIECDMXXXXXXXXXXX 352
IG G FG V++AR + VAVK+ + ++ F E +
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 353 XXXXXXXDDFKALVLEYMPHGSLEKCLYSSNY-----------------------ILDIF 389
L+ EYM +G L + L S + L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 390 QRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSL 449
++L I VA+ + YL +H DL N L+ +NMV ++DFG+++ + D
Sbjct: 175 EQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT 489
I +M PE + +T DV+++G++L E F+
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 34/179 (18%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
+A +EYL S IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 166 LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 458 IGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKK------PTDEIFFGDMTLKHWVNDL 511
+ +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------------- 269
Query: 512 LPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
L ++ C + ++ + C P QR K++V L +I
Sbjct: 270 ------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 34/179 (18%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
+A +EYL S IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 155 LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 211
Query: 458 IGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKK------PTDEIFFGDMTLKHWVNDL 511
+ +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 212 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------------- 258
Query: 512 LPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
L ++ C + ++ + C P QR K++V L +I
Sbjct: 259 ------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
VA +E+L S IH DL N+LL + V + DFG+A+ + K+ + +
Sbjct: 153 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 458 IGYMAPEYGREGQVSTNGDVYSFGIMLMETFT 489
+ +MAPE + + DV+SFG++L E F+
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 34/179 (18%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
+A +EYL S IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 166 LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 458 IGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKK------PTDEIFFGDMTLKHWVNDL 511
+ +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------------- 269
Query: 512 LPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
L ++ C + ++ + C P QR K++V L +I
Sbjct: 270 ------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 386 LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE 445
L++ L+ VA + +L S IH D+ NVLL + VA + DFG+A+ ++ +
Sbjct: 149 LELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 205
Query: 446 DQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT 489
+ + + +MAPE + + DV+S+GI+L E F+
Sbjct: 206 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 34/179 (18%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
+A +EYL S IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 158 LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 214
Query: 458 IGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKK------PTDEIFFGDMTLKHWVNDL 511
+ +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 215 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------------- 261
Query: 512 LPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
L ++ C + ++ + C P QR K++V L +I
Sbjct: 262 ------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 34/179 (18%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
+A +EYL S IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 166 LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 458 IGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKK------PTDEIFFGDMTLKHWVNDL 511
+ +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------------- 269
Query: 512 LPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
L ++ C + ++ + C P QR K++V L +I
Sbjct: 270 ------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 386 LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE 445
L++ L+ VA + +L S IH D+ NVLL + VA + DFG+A+ ++ +
Sbjct: 157 LELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 213
Query: 446 DQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT 489
+ + + +MAPE + + DV+S+GI+L E F+
Sbjct: 214 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 26/196 (13%)
Query: 365 LVLEYMPHGSLEKCL--YSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSN 422
+V E P GSL L + +++L R + VA + YL S IH DL N
Sbjct: 91 MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---SKRFIHRDLAARN 145
Query: 423 VLLDDNMVAHLSDFGMAKPLLK-EDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFG 481
+LL + + DFG+ + L + +D + Q + APE + S D + FG
Sbjct: 146 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 205
Query: 482 IMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSF 541
+ L E FT +G + W+ L ++ +D ++ E C
Sbjct: 206 VTLWEMFT---------YGQ---EPWIG-LNGSQILHKID-----KEGERLPRPEDCPQD 247
Query: 542 IFNLAMKCTVESPEQR 557
I+N+ ++C PE R
Sbjct: 248 IYNVMVQCWAHKPEDR 263
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 24/200 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
+++E+M +G+L L N ++ L + ++SA+EYL IH DL N
Sbjct: 87 IIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 143
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N + ++DFG+++ L+ D I + APE + S DV++FG++
Sbjct: 144 LVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 202
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
L E T +G + P +++ L +KD C ++
Sbjct: 203 LWEIAT---------YG----------MSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 243
Query: 544 NLAMKCTVESPEQRINAKEI 563
L C +P R + EI
Sbjct: 244 ELMRACWQWNPSDRPSFAEI 263
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 17/205 (8%)
Query: 300 IGRGGFGSVYKARIQ-DGMEVAVK----VFDL--QYGRAFKSFDIECDMXXXXXXXXXXX 352
IG G +G V AR + G +VA+K FD+ R + I
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 353 XXXXXXXDDFKAL--VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
+FK++ VL+ M L + ++SS L + + + L+Y+H S
Sbjct: 123 LRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH---S 177
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE--DQSLTQTQTLATIGYMAPEYGRE 468
+IH DLKPSN+L+++N + DFGMA+ L + T+ +AT Y APE
Sbjct: 178 AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLS 237
Query: 469 GQVSTNG-DVYSFGIMLMETFTRKK 492
T D++S G + E R++
Sbjct: 238 LHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 86/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G + K L + D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-FDEQRTATYITELANALSYC 129
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEM 182
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 34/179 (18%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
+A +EYL S IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 166 LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 458 IGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKK------PTDEIFFGDMTLKHWVNDL 511
+ +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------------- 269
Query: 512 LPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
L ++ C + ++ + C P QR K++V L +I
Sbjct: 270 ------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 34/179 (18%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
+A +EYL S IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 153 LARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 209
Query: 458 IGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKK------PTDEIFFGDMTLKHWVNDL 511
+ +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 210 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------------- 256
Query: 512 LPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
L ++ C + ++ + C P QR K++V L +I
Sbjct: 257 ------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 303
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 89/213 (41%), Gaps = 23/213 (10%)
Query: 301 GRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKS----FDIECDMXXXXXXXXXXXXXXX 356
RG FG V+KA++ + VAVK+F LQ ++++S F M
Sbjct: 24 ARGRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQSEREIFSTP-GMKHENLLQFIAAEKRG 81
Query: 357 XXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF--------G 408
+ L+ + GSL Y I+ + ++ ++ L YLH G
Sbjct: 82 SNLEVELWLITAFHDKGSLTD--YLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 409 YSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGRE 468
+ I H D K NVLL ++ A L+DFG+A + T YMAPE E
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEV-LE 198
Query: 469 GQVSTNG------DVYSFGIMLMETFTRKKPTD 495
G ++ D+Y+ G++L E +R K D
Sbjct: 199 GAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 26/196 (13%)
Query: 365 LVLEYMPHGSLEKCL--YSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSN 422
+V E P GSL L + +++L R + VA + YL S IH DL N
Sbjct: 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARN 151
Query: 423 VLLDDNMVAHLSDFGMAKPLLK-EDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFG 481
+LL + + DFG+ + L + +D + Q + APE + S D + FG
Sbjct: 152 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 211
Query: 482 IMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSF 541
+ L E FT +G + W+ L ++ +D ++ E C
Sbjct: 212 VTLWEMFT---------YGQ---EPWIG-LNGSQILHKID-----KEGERLPRPEDCPQD 253
Query: 542 IFNLAMKCTVESPEQR 557
I+N+ ++C PE R
Sbjct: 254 IYNVMVQCWAHKPEDR 269
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 386 LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE 445
L++ L+ VA + +L S IH D+ NVLL + VA + DFG+A+ ++ +
Sbjct: 155 LELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
Query: 446 DQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT 489
+ + + +MAPE + + DV+S+GI+L E F+
Sbjct: 212 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 26/196 (13%)
Query: 365 LVLEYMPHGSLEKCL--YSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSN 422
+V E P GSL L + +++L R + VA + YL S IH DL N
Sbjct: 91 MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARN 145
Query: 423 VLLDDNMVAHLSDFGMAKPLLK-EDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFG 481
+LL + + DFG+ + L + +D + Q + APE + S D + FG
Sbjct: 146 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 205
Query: 482 IMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSF 541
+ L E FT +G + W+ L ++ +D ++ E C
Sbjct: 206 VTLWEMFT---------YGQ---EPWIG-LNGSQILHKID-----KEGERLPRPEDCPQD 247
Query: 542 IFNLAMKCTVESPEQR 557
I+N+ ++C PE R
Sbjct: 248 IYNVMVQCWAHKPEDR 263
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 26/196 (13%)
Query: 365 LVLEYMPHGSLEKCL--YSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSN 422
+V E P GSL L + +++L R + VA + YL S IH DL N
Sbjct: 87 MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARN 141
Query: 423 VLLDDNMVAHLSDFGMAKPLLK-EDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFG 481
+LL + + DFG+ + L + +D + Q + APE + S D + FG
Sbjct: 142 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 201
Query: 482 IMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSF 541
+ L E FT +G + W+ L ++ +D ++ E C
Sbjct: 202 VTLWEMFT---------YGQ---EPWIG-LNGSQILHKID-----KEGERLPRPEDCPQD 243
Query: 542 IFNLAMKCTVESPEQR 557
I+N+ ++C PE R
Sbjct: 244 IYNVMVQCWAHKPEDR 259
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 26/196 (13%)
Query: 365 LVLEYMPHGSLEKCL--YSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSN 422
+V E P GSL L + +++L R + VA + YL S IH DL N
Sbjct: 87 MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARN 141
Query: 423 VLLDDNMVAHLSDFGMAKPLLK-EDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFG 481
+LL + + DFG+ + L + +D + Q + APE + S D + FG
Sbjct: 142 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 201
Query: 482 IMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSF 541
+ L E FT +G + W+ L ++ +D ++ E C
Sbjct: 202 VTLWEMFT---------YGQ---EPWIG-LNGSQILHKID-----KEGERLPRPEDCPQD 243
Query: 542 IFNLAMKCTVESPEQR 557
I+N+ ++C PE R
Sbjct: 244 IYNVMVQCWAHKPEDR 259
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 115/293 (39%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDG----MEVAVKVFDLQYG-RAFKSFDIE 338
L I + T ++G G FG+VYK + +G + VA+K+ + G +A F E
Sbjct: 32 LRILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDE 90
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + LV + MPHG L + ++ + LN + +
Sbjct: 91 ALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI 149
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG+A+ L +++ I
Sbjct: 150 AKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPI 206
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + + DV+S+G+ + E T KP D I
Sbjct: 207 KWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG-----------------IPTR 249
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
EI D L +K E C ++ + +KC + + R KE+ ++
Sbjct: 250 EIPD---LLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 299
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S +T+ T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTELCGTLDYLPPEM 177
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 24/200 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
+++E+M +G+L L N ++ L + ++SA+EYL IH DL N
Sbjct: 91 IIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 147
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N + ++DFG+++ L+ D I + APE + S DV++FG++
Sbjct: 148 LVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 206
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
L E T +G + P +++ L +KD C ++
Sbjct: 207 LWEIAT---------YG----------MSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 247
Query: 544 NLAMKCTVESPEQRINAKEI 563
L C +P R + EI
Sbjct: 248 ELMRACWQWNPSDRPSFAEI 267
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 115/293 (39%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDG----MEVAVKVFDLQYG-RAFKSFDIE 338
L I + T + ++G G FG+VYK I DG + VA+KV +A K E
Sbjct: 11 LRILKETE-LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDE 69
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + LV + MP+G L + + L LN + +
Sbjct: 70 AYVMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI 128
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL V ++H DL NVL+ ++DFG+A+ L ++ I
Sbjct: 129 AKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPI 185
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + + DV+S+G+ + E T KP D I
Sbjct: 186 KWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDG-----------------IPAR 228
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
EI D L +K E C ++ + +KC + E R +E+V+ ++
Sbjct: 229 EIPD---LLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRM 278
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
+A +EYL S IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 212 LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 268
Query: 458 IGYMAPEYGREGQVSTNGDVYSFGIMLMETFT 489
+ +MAPE + + DV+SFG+++ E FT
Sbjct: 269 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 392 LNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ 451
L+ VA + +L S IH D+ NVLL + VA + DFG+A+ ++ + + +
Sbjct: 169 LHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 225
Query: 452 TQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT 489
+ +MAPE + + DV+S+GI+L E F+
Sbjct: 226 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSN 422
++ +E+M GSL++ L + I + I +++I V L YL + I+H D+KPSN
Sbjct: 90 SICMEHMDGGSLDQVLKEAKRIPEEILGKVSIA--VLRGLAYLREKHQ--IMHRDVKPSN 145
Query: 423 VLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGI 482
+L++ L DFG++ L+ + T YMAPE + S D++S G+
Sbjct: 146 ILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMAPERLQGTHYSVQSDIWSMGL 201
Query: 483 MLMETFTRKKP 493
L+E + P
Sbjct: 202 SLVELAVGRYP 212
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 26/148 (17%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-----------------------LDIFQRLNIMIDVASA 401
L++EY +GSL L S + L + ++ ++
Sbjct: 103 LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQG 162
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
++YL + ++H DL N+L+ + +SDFG+++ + +ED + ++Q + +M
Sbjct: 163 MQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWM 219
Query: 462 APEYGREGQVSTNGDVYSFGIMLMETFT 489
A E + +T DV+SFG++L E T
Sbjct: 220 AIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
+++E+M +G+L L N + L + ++SA+EYL IH DL N
Sbjct: 86 IIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 142
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N + ++DFG+++ L+ D I + APE + S DV++FG++
Sbjct: 143 LVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
L E T +G + P +++ L +KD C ++
Sbjct: 202 LWEIAT---------YG----------MSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 242
Query: 544 NLAMKCTVESPEQRINAKEI 563
L C +P R + EI
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 26/148 (17%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-----------------------LDIFQRLNIMIDVASA 401
L++EY +GSL L S + L + ++ ++
Sbjct: 103 LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQG 162
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
++YL + ++H DL N+L+ + +SDFG+++ + +ED + ++Q + +M
Sbjct: 163 MQYLA---EMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWM 219
Query: 462 APEYGREGQVSTNGDVYSFGIMLMETFT 489
A E + +T DV+SFG++L E T
Sbjct: 220 AIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 111/280 (39%), Gaps = 31/280 (11%)
Query: 298 NLIGRGGFGSVYKA-RIQDG----MEVAVKVFDLQYG-RAFKSFDIECDMXXXXXXXXXX 351
++G G FG+VYK + +G + VA+K+ + G +A F E +
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 352 XXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 411
+ LV + MPHG L + ++ + LN + +A + YL
Sbjct: 81 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ER 136
Query: 412 PIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQV 471
++H DL NVL+ ++DFG+A+ L +++ I +MA E +
Sbjct: 137 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 196
Query: 472 STNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDE 530
+ DV+S+G+ + E T KP D I EI D L +K E
Sbjct: 197 THQSDVWSYGVTIWELMTFGGKPYDG-----------------IPTREIPD---LLEKGE 236
Query: 531 HFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
C ++ + +KC + + R KE+ ++
Sbjct: 237 RLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 276
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 93/212 (43%), Gaps = 31/212 (14%)
Query: 365 LVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVASALEYLHFGYSVPIIH 415
+++E M G L+ L S +N +L + + + + ++A + YL+ + +H
Sbjct: 92 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 148
Query: 416 CDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG 475
DL N + ++ + DFGM + + + D + L + +M+PE ++G +T
Sbjct: 149 RDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 208
Query: 476 DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTK 535
DV+SFG++L E T + + + L+ +++ LL + D
Sbjct: 209 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD------ 250
Query: 536 GQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567
C + L C +P+ R + EI++ +
Sbjct: 251 -NCPDMLLELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
++ E+M +G+L L N ++ L + ++SA+EYL IH DL N
Sbjct: 91 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 147
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N + ++DFG+++ L+ D I + APE + S DV++FG++
Sbjct: 148 LVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 206
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
L E T +G + P +++ L +KD C ++
Sbjct: 207 LWEIAT---------YG----------MSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 247
Query: 544 NLAMKCTVESPEQRINAKEI 563
L C +P R + EI
Sbjct: 248 ELMRACWQWNPSDRPSFAEI 267
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 13/130 (10%)
Query: 365 LVLEYMPHGSLE----KCLYSSNYILDIFQRLNIMIDVASALEYLHF----GYSVPIIHC 416
+V+EY G L K Y+ + F L +M + AL+ H G++V +H
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFV-LRVMTQLTLALKECHRRSDGGHTV--LHR 140
Query: 417 DLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGD 476
DLKP+NV LD L DFG+A+ +L D S +T + T YM+PE + D
Sbjct: 141 DLKPANVFLDGKQNVKLGDFGLAR-ILNHDTSFAKT-FVGTPYYMSPEQMNRMSYNEKSD 198
Query: 477 VYSFGIMLME 486
++S G +L E
Sbjct: 199 IWSLGCLLYE 208
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 12/191 (6%)
Query: 300 IGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXX 357
+G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 358 XXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIH 415
D L+LEY P G++ + L + D + + ++A+AL Y H S +IH
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCH---SKRVIH 135
Query: 416 CDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG 475
D+KP N+LL N ++DFG + S +T T+ Y+ PE
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 191
Query: 476 DVYSFGIMLME 486
D++S G++ E
Sbjct: 192 DLWSLGVLCYE 202
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
+++E+M +G+L L N + L + ++SA+EYL IH DL N
Sbjct: 86 IIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 142
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N + ++DFG+++ L+ D I + APE + S DV++FG++
Sbjct: 143 LVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
L E T +G + P +++ L +KD C ++
Sbjct: 202 LWEIAT---------YG----------MSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 242
Query: 544 NLAMKCTVESPEQRINAKEI 563
L C +P R + EI
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 11/104 (10%)
Query: 394 IMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 453
+ ++ AL+YL + IIH D+KP N+LLD++ H++DF +A L +E TQ
Sbjct: 120 FICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE----TQIT 172
Query: 454 TLA-TIGYMAPEY--GREGQ-VSTNGDVYSFGIMLMETFTRKKP 493
T+A T YMAPE R+G S D +S G+ E ++P
Sbjct: 173 TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQT 452
++M + L++LH S ++H DLKP N+L+ + L+DFG+A+ + T
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALT 177
Query: 453 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
+ T+ Y APE + +T D++S G + E F RK
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTXLCGTLDYLPPEM 177
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 88/213 (41%), Gaps = 31/213 (14%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXX------XXX 353
+G+G +G V++ Q G VAVK+F R KS+ E ++
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 354 XXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLH---FGYS 410
L+ Y GSL L + LD L I++ +AS L +LH FG
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 411 --VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT-----LATIGYMAP 463
I H DLK N+L+ N ++D G+A + QS Q + T YMAP
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLA---VMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 464 EYGREG-QVST-----NGDVYSFGIMLMETFTR 490
E E QV D+++FG++L E R
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSN 422
++ +E+M GSL++ L + I + I +++I V L YL + I+H D+KPSN
Sbjct: 99 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 154
Query: 423 VLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGI 482
+L++ L DFG++ L+ + T YM+PE + S D++S G+
Sbjct: 155 ILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 210
Query: 483 MLMETFTRKKP 493
L+E + P
Sbjct: 211 SLVEMAVGRYP 221
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 26/148 (17%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-----------------------LDIFQRLNIMIDVASA 401
L++EY +GSL L S + L + ++ ++
Sbjct: 103 LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQG 162
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
++YL + ++H DL N+L+ + +SDFG+++ + +ED + ++Q + +M
Sbjct: 163 MQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWM 219
Query: 462 APEYGREGQVSTNGDVYSFGIMLMETFT 489
A E + +T DV+SFG++L E T
Sbjct: 220 AIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQT 452
++M + L++LH S ++H DLKP N+L+ + L+DFG+A+ + T
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALT 177
Query: 453 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
+ T+ Y APE + +T D++S G + E F RK
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPPEM 177
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 123
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 124 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEM 176
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 125
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 126 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPPEM 178
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 88/213 (41%), Gaps = 31/213 (14%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXX------XXX 353
+G+G +G V++ Q G VAVK+F R KS+ E ++
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 354 XXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLH---FGYS 410
L+ Y GSL L + LD L I++ +AS L +LH FG
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 411 --VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT-----LATIGYMAP 463
I H DLK N+L+ N ++D G+A + QS Q + T YMAP
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLA---VMHSQSTNQLDVGNNPRVGTKRYMAP 215
Query: 464 EYGREG-QVST-----NGDVYSFGIMLMETFTR 490
E E QV D+++FG++L E R
Sbjct: 216 EVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 248
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEM 177
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 88/213 (41%), Gaps = 31/213 (14%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXX------XXX 353
+G+G +G V++ Q G VAVK+F R KS+ E ++
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 354 XXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLH---FGYS 410
L+ Y GSL L + LD L I++ +AS L +LH FG
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 411 --VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT-----LATIGYMAP 463
I H DLK N+L+ N ++D G+A + QS Q + T YMAP
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLA---VMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 464 EYGREG-QVST-----NGDVYSFGIMLMETFTR 490
E E QV D+++FG++L E R
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
++ E+M +G+L L N ++ L + ++SA+EYL IH DL N
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 142
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N + ++DFG+++ L+ D I + APE + S DV++FG++
Sbjct: 143 LVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
L E T +G + P +++ L +KD C ++
Sbjct: 202 LWEIAT---------YG----------MSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 242
Query: 544 NLAMKCTVESPEQRINAKEI 563
L C +P R + EI
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSN 422
++ +E+M GSL++ L + I + I +++I V L YL + I+H D+KPSN
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 135
Query: 423 VLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGI 482
+L++ L DFG++ L+ + T YM+PE + S D++S G+
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
Query: 483 MLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFI 542
L+E + P + + P+++ E++D ++++ + + F
Sbjct: 192 SLVEMAVGRYPIPPPDAKE-------DSRPPMAIFELLDY-IVNEPPPKLPSGVFSLEFQ 243
Query: 543 FNLAMKCTVESPEQRINAKEIVTR 566
+ KC +++P +R + K+++
Sbjct: 244 -DFVNKCLIKNPAERADLKQLMVH 266
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
++ E+M +G+L L N ++ L + ++SA+EYL IH DL N
Sbjct: 90 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 146
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N + ++DFG+++ L+ D I + APE + S DV++FG++
Sbjct: 147 LVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 205
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
L E T +G + P +++ L +KD C ++
Sbjct: 206 LWEIAT---------YG----------MSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 246
Query: 544 NLAMKCTVESPEQRINAKEI 563
L C +P R + EI
Sbjct: 247 ELMRACWQWNPSDRPSFAEI 266
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 129
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEX 182
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 183 IEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 128
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 129 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEM 181
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPPEM 177
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 84/202 (41%), Gaps = 15/202 (7%)
Query: 299 LIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXX 357
++G+G FG V AR+++ G AVKV L+ + D+EC M
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKV--LKKDVILQDDDVECTMTEKRILSLARNHPFLT 87
Query: 358 X------XDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 411
D V+E++ G L + S + R ++ SAL +LH
Sbjct: 88 QLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEIISALMFLH---DK 143
Query: 412 PIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQV 471
II+ DLK NVLLD L+DFGM K + +T T Y+APE +E
Sbjct: 144 GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC--NGVTTATFCGTPDYIAPEILQEMLY 201
Query: 472 STNGDVYSFGIMLMETFTRKKP 493
D ++ G++L E P
Sbjct: 202 GPAVDWWAMGVLLYEMLCGHAP 223
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 396 IDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTL 455
I +A+ H ++ IIH D+KPSN+LLD + L DFG++ L+ S+ +T+
Sbjct: 130 ITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV---DSIAKTRDA 186
Query: 456 ATIGYMAPE-----YGREGQVSTNGDVYSFGIMLMETFTRKKP 493
YMAPE R+G DV+S GI L E T + P
Sbjct: 187 GCRPYMAPERIDPSASRQG-YDVRSDVWSLGITLYELATGRFP 228
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEM 180
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQT 452
++M + L++LH S ++H DLKP N+L+ + L+DFG+A+ + T
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALT 177
Query: 453 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
+ T+ Y APE + +T D++S G + E F RK
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 129
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPPEM 182
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
++ E+M +G+L L N ++ L + ++SA+EYL IH DL N
Sbjct: 91 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 147
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N + ++DFG+++ L+ D I + APE + S DV++FG++
Sbjct: 148 LVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 206
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
L E T +G + P +++ L +KD C ++
Sbjct: 207 LWEIAT---------YG----------MSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 247
Query: 544 NLAMKCTVESPEQRINAKEI 563
L C +P R + EI
Sbjct: 248 ELMRACWQWNPSDRPSFAEI 267
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSN 422
++ +E+M GSL++ L + I + I +++I V L YL + I+H D+KPSN
Sbjct: 107 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 162
Query: 423 VLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGI 482
+L++ L DFG++ L+ + T YM+PE + S D++S G+
Sbjct: 163 ILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 218
Query: 483 MLMETFTRKKP 493
L+E + P
Sbjct: 219 SLVEMAVGRYP 229
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
++ E+M +G+L L N ++ L + ++SA+EYL IH DL N
Sbjct: 91 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 147
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N + ++DFG+++ L+ D I + APE + S DV++FG++
Sbjct: 148 LVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 206
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
L E T +G + P +++ L +KD C ++
Sbjct: 207 LWEIAT---------YG----------MSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 247
Query: 544 NLAMKCTVESPEQRINAKEI 563
L C +P R + EI
Sbjct: 248 ELMRACWQWNPSDRPSFAEI 267
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 13/205 (6%)
Query: 300 IGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXX 358
+G G FG VYKA+ ++ + A KV D + + + +E D+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 359 XDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
++ +++E+ G+++ + L Q + AL YLH IIH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDL 161
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT-LATIGYMAPEY-----GREGQVS 472
K N+L + L+DFG++ K +++ + + + T +MAPE ++
Sbjct: 162 KAGNILFTLDGDIKLADFGVSA---KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 473 TNGDVYSFGIMLMETFTRKKPTDEI 497
DV+S GI L+E + P E+
Sbjct: 219 YKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
++ E+M +G+L L N ++ L + ++SA+EYL IH DL N
Sbjct: 99 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 155
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N + ++DFG+++ L+ D I + APE + S DV++FG++
Sbjct: 156 LVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 214
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
L E T +G + P +++ L +KD C ++
Sbjct: 215 LWEIAT---------YG----------MSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 255
Query: 544 NLAMKCTVESPEQRINAKEI 563
L C +P R + EI
Sbjct: 256 ELMRACWQWNPSDRPSFAEI 275
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
++ LE LH I++ DLKP N+LLDD+ +SD G+A + + T +
Sbjct: 294 EICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA---VHVPEGQTIKGRVG 347
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
T+GYMAPE + + + + D ++ G +L E + P
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
++ E+M +G+L L N ++ L + ++SA+EYL IH DL N
Sbjct: 88 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 144
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N + ++DFG+++ L+ D I + APE + S DV++FG++
Sbjct: 145 LVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 203
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
L E T +G + P +++ L +KD C ++
Sbjct: 204 LWEIAT---------YG----------MSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 244
Query: 544 NLAMKCTVESPEQRINAKEI 563
L C +P R + EI
Sbjct: 245 ELMRACWQWNPSDRPSFAEI 264
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 9/132 (6%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI-DVASALEYLHFGYSVPIIHCDLKPSNV 423
L+L+Y+ G L L + + I + ++ ALE+LH + II+ D+K N+
Sbjct: 136 LILDYINGGELFTHLSQRERFTE--HEVQIYVGEIVLALEHLH---KLGIIYRDIKLENI 190
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG--DVYSFG 481
LLD N L+DFG++K + D++ TI YMAP+ R G + D +S G
Sbjct: 191 LLDSNGHVVLTDFGLSKEFVA-DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLG 249
Query: 482 IMLMETFTRKKP 493
+++ E T P
Sbjct: 250 VLMYELLTGASP 261
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 13/105 (12%)
Query: 392 LNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLT- 450
L+I + +A A+E+LH S ++H DLKPSN+ + V + DFG+ + ++++ T
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 451 ---------QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLME 486
T + T YM+PE S D++S G++L E
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE 222
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI---DVASALEYLHFGYSVPIIHCDLKPS 421
LV+ M G + +Y+ + FQ + + S LE+LH II+ DLKP
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPE 318
Query: 422 NVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE--YGREGQVSTNGDVYS 479
NVLLDD+ +SD G+A LK Q+ T+ T G+MAPE G E S D ++
Sbjct: 319 NVLLDDDGNVRISDLGLAVE-LKAGQTKTKGYA-GTPGFMAPELLLGEEYDFSV--DYFA 374
Query: 480 FGIMLMETFTRKKP 493
G+ L E + P
Sbjct: 375 LGVTLYEMIAARGP 388
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
++ LE LH I++ DLKP N+LLDD+ +SD G+A + + T +
Sbjct: 294 EICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA---VHVPEGQTIKGRVG 347
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
T+GYMAPE + + + + D ++ G +L E + P
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEM 180
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI---DVASALEYLHFGYSVPIIHCDLKPS 421
LV+ M G + +Y+ + FQ + + S LE+LH II+ DLKP
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPE 318
Query: 422 NVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE--YGREGQVSTNGDVYS 479
NVLLDD+ +SD G+A LK Q+ T+ T G+MAPE G E S D ++
Sbjct: 319 NVLLDDDGNVRISDLGLAVE-LKAGQTKTKGYA-GTPGFMAPELLLGEEYDFSV--DYFA 374
Query: 480 FGIMLMETFTRKKP 493
G+ L E + P
Sbjct: 375 LGVTLYEMIAARGP 388
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
++ E+M +G+L L N ++ L + ++SA+EYL IH DL N
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 142
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N + ++DFG+++ L+ D I + APE + S DV++FG++
Sbjct: 143 LVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
L E T +G + P +++ L +KD C ++
Sbjct: 202 LWEIAT---------YG----------MSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 242
Query: 544 NLAMKCTVESPEQRINAKEI 563
L C +P R + EI
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 121
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 122 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEM 174
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI---DVASALEYLHFGYSVPIIHCDLKPS 421
LV+ M G + +Y+ + FQ + + S LE+LH II+ DLKP
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPE 318
Query: 422 NVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE--YGREGQVSTNGDVYS 479
NVLLDD+ +SD G+A LK Q+ T+ T G+MAPE G E S D ++
Sbjct: 319 NVLLDDDGNVRISDLGLAVE-LKAGQTKTKGYA-GTPGFMAPELLLGEEYDFSV--DYFA 374
Query: 480 FGIMLMETFTRKKP 493
G+ L E + P
Sbjct: 375 LGVTLYEMIAARGP 388
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 150
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 151 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEM 203
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
++ E+M +G+L L N ++ L + ++SA+EYL IH DL N
Sbjct: 88 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 144
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N + ++DFG+++ L+ D I + APE + S DV++FG++
Sbjct: 145 LVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 203
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
L E T +G + P +++ L +KD C ++
Sbjct: 204 LWEIAT---------YG----------MSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 244
Query: 544 NLAMKCTVESPEQRINAKEI 563
L C +P R + EI
Sbjct: 245 ELMRACWQWNPSDRPSFAEI 264
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSN 422
++ +E+M GSL++ L + I + I +++I V L YL + I+H D+KPSN
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 135
Query: 423 VLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGI 482
+L++ L DFG++ L+ + T YM+PE + S D++S G+
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
Query: 483 MLMETFTRKKP 493
L+E + P
Sbjct: 192 SLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSN 422
++ +E+M GSL++ L + I + I +++I V L YL + I+H D+KPSN
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 135
Query: 423 VLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGI 482
+L++ L DFG++ L+ + T YM+PE + S D++S G+
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
Query: 483 MLMETFTRKKP 493
L+E + P
Sbjct: 192 SLVEMAVGRYP 202
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 129
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEM 182
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI---DVASALEYLHFGYSVPIIHCDLKPS 421
LV+ M G + +Y+ + FQ + + S LE+LH II+ DLKP
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPE 318
Query: 422 NVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE--YGREGQVSTNGDVYS 479
NVLLDD+ +SD G+A LK Q+ T+ T G+MAPE G E S D ++
Sbjct: 319 NVLLDDDGNVRISDLGLAVE-LKAGQTKTKGYA-GTPGFMAPELLLGEEYDFSV--DYFA 374
Query: 480 FGIMLMETFTRKKP 493
G+ L E + P
Sbjct: 375 LGVTLYEMIAARGP 388
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSN 422
++ +E+M GSL++ L + I + I +++I V L YL + I+H D+KPSN
Sbjct: 142 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 197
Query: 423 VLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGI 482
+L++ L DFG++ L+ + T YM+PE + S D++S G+
Sbjct: 198 ILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 253
Query: 483 MLMETFTRKKP 493
L+E + P
Sbjct: 254 SLVEMAVGRYP 264
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 11/204 (5%)
Query: 300 IGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXX 358
+G G FG VYKA+ ++ + A KV D + + + +E D+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 359 XDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
++ +++E+ G+++ + L Q + AL YLH IIH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDL 161
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY-----GREGQVST 473
K N+L + L+DFG++ + Q + + T +MAPE ++
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRXIQR--RDSFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 474 NGDVYSFGIMLMETFTRKKPTDEI 497
DV+S GI L+E + P E+
Sbjct: 220 KADVWSLGITLIEMAEIEPPHHEL 243
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 24/200 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
++ E+M +G+L L N + L + ++SA+EYL IH DL N
Sbjct: 91 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 147
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N + ++DFG+++ L+ D I + APE + S DV++FG++
Sbjct: 148 LVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 206
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
L E T +G + P +++ L +KD C ++
Sbjct: 207 LWEIAT---------YG----------MSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 247
Query: 544 NLAMKCTVESPEQRINAKEI 563
L C +P R + EI
Sbjct: 248 ELMRACWQWNPSDRPSFAEI 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 24/200 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
++ E+M +G+L L N + L + ++SA+EYL IH DL N
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 142
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N + ++DFG+++ L+ D I + APE + S DV++FG++
Sbjct: 143 LVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
L E T +G + P +++ L +KD C ++
Sbjct: 202 LWEIAT---------YG----------MSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 242
Query: 544 NLAMKCTVESPEQRINAKEI 563
L C +P R + EI
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 11/204 (5%)
Query: 300 IGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXX 358
+G G FG VYKA+ ++ + A KV D + + + +E D+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 359 XDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
++ +++E+ G+++ + L Q + AL YLH IIH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDL 161
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY-----GREGQVST 473
K N+L + L+DFG++ + Q + + T +MAPE ++
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRXIQR--RDXFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 474 NGDVYSFGIMLMETFTRKKPTDEI 497
DV+S GI L+E + P E+
Sbjct: 220 KADVWSLGITLIEMAEIEPPHHEL 243
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 141
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 142 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEM 194
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 195 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSN 422
++ +E+M GSL++ L + I + I +++I V L YL + I+H D+KPSN
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 135
Query: 423 VLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGI 482
+L++ L DFG++ L+ + T YM+PE + S D++S G+
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
Query: 483 MLMETFTRKKP 493
L+E + P
Sbjct: 192 SLVEMAVGRYP 202
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 85/208 (40%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G + K L + D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS-KFDEQRTATYITELANALSYC 129
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S + T+ Y+ PE
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRXXLXGTLDYLPPEM 182
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSN 422
++ +E+M GSL++ L + I + I +++I V L YL + I+H D+KPSN
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 135
Query: 423 VLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGI 482
+L++ L DFG++ L+ + T YM+PE + S D++S G+
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
Query: 483 MLMETFTRKKP 493
L+E + P
Sbjct: 192 SLVEMAVGRYP 202
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 24/200 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
+++E+M +G+L L N + L + ++SA+EYL IH DL N
Sbjct: 84 IIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 140
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N + ++DFG+++ L+ D I + APE + S DV++FG++
Sbjct: 141 LVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 199
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
L E T +G + P ++ L +KD C ++
Sbjct: 200 LWEIAT---------YG----------MSPYPGIDPSQVYELLEKDYRMERPEGCPEKVY 240
Query: 544 NLAMKCTVESPEQRINAKEI 563
L C +P R + EI
Sbjct: 241 ELMRACWQWNPSDRPSFAEI 260
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 24/200 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
++ E+M +G+L L N + L + ++SA+EYL IH DL N
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 142
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N + ++DFG+++ L+ D I + APE + S DV++FG++
Sbjct: 143 LVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
L E T +G + P +++ L +KD C ++
Sbjct: 202 LWEIAT---------YG----------MSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 242
Query: 544 NLAMKCTVESPEQRINAKEI 563
L C +P R + EI
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 85/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F IG G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EYMP G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 85/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F IG G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EYMP G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 299 LIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXX 357
++G+G +G VY R + + + +A+K + R + E +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMI-DVASALEYLHFGYSVPIIH 415
+ F + +E +P GSL L S + D Q + + L+YLH I+H
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVH 131
Query: 416 CDLKPSNVLLDD-NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ--VS 472
D+K NVL++ + V +SDFG +K L + T+T T T+ YMAPE +G
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTETFT-GTLQYMAPEIIDKGPRGYG 189
Query: 473 TNGDVYSFGIMLMETFTRKKPTDEI 497
D++S G ++E T K P E+
Sbjct: 190 KAADIWSLGCTIIEMATGKPPFYEL 214
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
++ E+M +G+L L N ++ L + ++SA+EYL IH DL N
Sbjct: 88 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 144
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N + ++DFG+++ L+ D I + APE + S DV++FG++
Sbjct: 145 LVGENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 203
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
L E T +G + P +++ L +KD C ++
Sbjct: 204 LWEIAT---------YG----------MSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 244
Query: 544 NLAMKCTVESPEQRINAKEI 563
L C +P R + EI
Sbjct: 245 ELMRACWQWNPSDRPSFAEI 264
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
++ E+M +G+L L N ++ L + ++SA+EYL IH DL N
Sbjct: 87 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 143
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N + ++DFG+++ L+ D I + APE + S DV++FG++
Sbjct: 144 LVGENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 202
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
L E T +G + P +++ L +KD C ++
Sbjct: 203 LWEIAT---------YG----------MSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 243
Query: 544 NLAMKCTVESPEQRINAKEI 563
L C +P R + EI
Sbjct: 244 ELMRACWQWNPSDRPSFAEI 263
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 299 LIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXX 357
++G+G +G VY R + + + +A+K + R + E +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMI-DVASALEYLHFGYSVPIIH 415
+ F + +E +P GSL L S + D Q + + L+YLH I+H
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVH 145
Query: 416 CDLKPSNVLLDD-NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ--VS 472
D+K NVL++ + V +SDFG +K L + T+T T T+ YMAPE +G
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTETFT-GTLQYMAPEIIDKGPRGYG 203
Query: 473 TNGDVYSFGIMLMETFTRKKPTDEI 497
D++S G ++E T K P E+
Sbjct: 204 KAADIWSLGCTIIEMATGKPPFYEL 228
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 125
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 126 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----CHAPSSRRTTLSGTLDYLPPEM 178
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQT 452
++M L++LH I+H DLKP N+L+ L+DFG+A+ + T
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALT 177
Query: 453 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
+ T+ Y APE + +T D++S G + E F RK
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 104/249 (41%), Gaps = 32/249 (12%)
Query: 257 ILRYRKRGKPLPNDANMPRISNQRRFTYLEIFQATNGFSENNLIGRGGFGSVYKARIQDG 316
IL Y + KP + R+ + EI + +IGRG FG V ++++
Sbjct: 52 ILEYLEWAKPFTSKVKQMRLHRED----FEILK---------VIGRGAFGEVAVVKLKNA 98
Query: 317 MEV-AVKV---FDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPH 372
+V A+K+ +++ F E D+ D+ LV++Y
Sbjct: 99 DKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVG 158
Query: 373 GSLEKCLYS-SNYILDIFQRLNI--MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM 429
G L L + + + R + M+ ++ LH+ +H D+KP N+L+D N
Sbjct: 159 GDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY------VHRDIKPDNILMDMNG 212
Query: 430 VAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY-----GREGQVSTNGDVYSFGIML 484
L+DFG L+ ED ++ + + T Y++PE G +G+ D +S G+ +
Sbjct: 213 HIRLADFGSCLKLM-EDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCM 271
Query: 485 METFTRKKP 493
E + P
Sbjct: 272 YEMLYGETP 280
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQT 452
I + + ALE+LH SV IH D+KPSNVL++ + DFG++ L+ S+ +T
Sbjct: 157 KIAVSIVKALEHLHSKLSV--IHRDVKPSNVLINALGQVKMCDFGISGYLV---DSVAKT 211
Query: 453 QTLATIGYMAPEY-----GREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHW 507
YMAPE ++G S D++S GI ++E + P D LK
Sbjct: 212 IDAGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 270
Query: 508 VNDLLP 513
V + P
Sbjct: 271 VEEPSP 276
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 13/105 (12%)
Query: 392 LNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS--- 448
L+I I +A A+E+LH S ++H DLKPSN+ + V + DFG+ + ++++
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 449 LTQTQTLAT----IG---YMAPEYGREGQVSTNGDVYSFGIMLME 486
LT AT +G YM+PE S D++S G++L E
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFE 268
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
++ E+M +G+L L N ++ L + ++SA+EYL IH +L N
Sbjct: 290 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNC 346
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N + ++DFG+++ L+ D I + APE + S DV++FG++
Sbjct: 347 LVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 405
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
L E T +G + P +++ L +KD C ++
Sbjct: 406 LWEIAT---------YG----------MSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 446
Query: 544 NLAMKCTVESPEQRINAKEI 563
L C +P R + EI
Sbjct: 447 ELMRACWQWNPSDRPSFAEI 466
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
++ E+M +G+L L N ++ L + ++SA+EYL IH +L N
Sbjct: 332 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNC 388
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N + ++DFG+++ L+ D I + APE + S DV++FG++
Sbjct: 389 LVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 447
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
L E T +G + P +++ L +KD C ++
Sbjct: 448 LWEIAT---------YG----------MSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 488
Query: 544 NLAMKCTVESPEQRINAKEI 563
L C +P R + EI
Sbjct: 489 ELMRACWQWNPSDRPSFAEI 508
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 91/229 (39%), Gaps = 23/229 (10%)
Query: 271 ANMPRISNQRRFTYLEIFQATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQY 328
A MP+ R+FT + F +G+G FG+VY AR Q+ +A+KV F Q
Sbjct: 5 AEMPK----RKFT-------IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL 53
Query: 329 GRAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYIL 386
+ + ++ D K L+LE+ P G L K L
Sbjct: 54 EKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-F 112
Query: 387 DIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED 446
D + M ++A AL Y H +IH D+KP N+L+ ++DFG +
Sbjct: 113 DEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS----VHA 165
Query: 447 QSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTD 495
SL + T+ Y+ PE D++ G++ E P D
Sbjct: 166 PSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 127/321 (39%), Gaps = 38/321 (11%)
Query: 257 ILRYRKRGKPLPNDANMPRISNQRRFTYLEIFQATNGFSENNLIGRGGFGSVYKA-RIQD 315
+L+ R+ +PL P NQ L I + T F + ++G G FG+VYK I +
Sbjct: 21 LLQERELVEPLTPSGEAP---NQ---ALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPE 73
Query: 316 G--MEVAVKVFDLQYG---RAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVLEYM 370
G +++ V + +L+ +A K E + + L+ + M
Sbjct: 74 GEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLM 132
Query: 371 PHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMV 430
P G L + + LN + +A + YL ++H DL NVL+
Sbjct: 133 PFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 189
Query: 431 AHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT- 489
++DFG+AK L E++ I +MA E + DV+S+G+ + E T
Sbjct: 190 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 249
Query: 490 RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKC 549
KP D I +++ S++E K E C ++ + +KC
Sbjct: 250 GSKPYDGIPASEIS-----------SILE---------KGERLPQPPICTIDVYMIMVKC 289
Query: 550 TVESPEQRINAKEIVTRLLKI 570
+ + R +E++ K+
Sbjct: 290 WMIDADSRPKFRELIIEFSKM 310
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 13/130 (10%)
Query: 365 LVLEYMPHGSLE----KCLYSSNYILDIFQRLNIMIDVASALEYLHF----GYSVPIIHC 416
+V+EY G L K Y+ + F L +M + AL+ H G++V +H
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFV-LRVMTQLTLALKECHRRSDGGHTV--LHR 140
Query: 417 DLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGD 476
DLKP+NV LD L DFG+A+ +L D+ + + + T YM+PE + D
Sbjct: 141 DLKPANVFLDGKQNVKLGDFGLAR-ILNHDEDFAK-EFVGTPYYMSPEQMNRMSYNEKSD 198
Query: 477 VYSFGIMLME 486
++S G +L E
Sbjct: 199 IWSLGCLLYE 208
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 13/130 (10%)
Query: 365 LVLEYMPHGSLE----KCLYSSNYILDIFQRLNIMIDVASALEYLHF----GYSVPIIHC 416
+V+EY G L K Y+ + F L +M + AL+ H G++V +H
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFV-LRVMTQLTLALKECHRRSDGGHTV--LHR 140
Query: 417 DLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGD 476
DLKP+NV LD L DFG+A+ +L D S + + T YM+PE + D
Sbjct: 141 DLKPANVFLDGKQNVKLGDFGLAR-ILNHDTSFAKA-FVGTPYYMSPEQMNRMSYNEKSD 198
Query: 477 VYSFGIMLME 486
++S G +L E
Sbjct: 199 IWSLGCLLYE 208
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 91/229 (39%), Gaps = 23/229 (10%)
Query: 271 ANMPRISNQRRFTYLEIFQATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQY 328
A MP+ R+FT + F +G+G FG+VY AR Q+ +A+KV F Q
Sbjct: 4 AEMPK----RKFT-------IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL 52
Query: 329 GRAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYIL 386
+ + ++ D K L+LE+ P G L K L
Sbjct: 53 EKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-F 111
Query: 387 DIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED 446
D + M ++A AL Y H +IH D+KP N+L+ ++DFG +
Sbjct: 112 DEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS----VHA 164
Query: 447 QSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTD 495
SL + T+ Y+ PE D++ G++ E P D
Sbjct: 165 PSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 79/194 (40%), Gaps = 13/194 (6%)
Query: 299 LIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXX----- 353
+IG+G FG V AR EV V LQ K + + M
Sbjct: 45 VIGKGSFGKVLLAR-HKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 354 -XXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 412
D VL+Y+ G L L L+ R ++ASAL YLH S+
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH---SLN 159
Query: 413 IIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVS 472
I++ DLKP N+LLD L+DFG+ K ++ + T + T Y+APE +
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS--TTSTFCGTPEYLAPEVLHKQPYD 217
Query: 473 TNGDVYSFGIMLME 486
D + G +L E
Sbjct: 218 RTVDWWCLGAVLYE 231
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 12/216 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKARIQDGMEV-AVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR ++ + A+KV F Q +A + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S + T+ Y+ PE
Sbjct: 125 H---SKKVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRAALCGTLDYLPPEM 177
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
D++S G++ E K P + + D
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQD 213
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 108/268 (40%), Gaps = 30/268 (11%)
Query: 300 IGRGGFGSVYKA-RIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXX 358
IG G G V A G +VAVK DL+ + + E +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 359 XDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
D +V+E++ G+L + + ++ Q + + V AL YLH + +IH D+
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIATVCLSVLRALSYLH---NQGVIHRDI 167
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
K ++LL + LSDFG + KE + + T +MAPE T D++
Sbjct: 168 KSDSILLTSDGRIKLSDFGFCAQVSKEVPK--RKXLVGTPYWMAPEVISRLPYGTEVDIW 225
Query: 479 SFGIMLMETFTRKKPTDEIFFGDMTLK--HWVNDLLPISVMEIVDANLLSQKDEHFTTKG 536
S GIM++E + P +F + L+ + D LP V KD H
Sbjct: 226 SLGIMVIEMIDGEPP----YFNEPPLQAMRRIRDSLPPRV-----------KDLH----- 265
Query: 537 QCVSFIFNLAMKCTVESPEQRINAKEIV 564
+ S + V P QR A+E++
Sbjct: 266 KVSSVLRGFLDLMLVREPSQRATAQELL 293
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 17/227 (7%)
Query: 274 PRISNQRRFTYLEIFQATNGFSENNLIGRGGFGSVYKARIQDGMEV-AVKVFDLQYGRAF 332
P ++ +R L+I F + ++G+G FG V+ A + + A+K L+
Sbjct: 2 PELNKER--PSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVL 57
Query: 333 KSFDIECDMXXXXXXXXX------XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYIL 386
D+EC M + V+EY+ G L + S +
Sbjct: 58 MDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-HKF 116
Query: 387 DIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED 446
D+ + ++ L++LH S I++ DLK N+LLD + ++DFGM K + D
Sbjct: 117 DLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD 173
Query: 447 QSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
+ T Y+APE + + + D +SFG++L E + P
Sbjct: 174 AK--TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 367 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD 426
+EY +G+L ++S N + + + AL Y+H S IIH DLKP N+ +D
Sbjct: 94 MEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFID 150
Query: 427 DNMVAHLSDFGMAK------PLLKED------QSLTQTQTLATIGYMAPEY-GREGQVST 473
++ + DFG+AK +LK D S T + T Y+A E G +
Sbjct: 151 ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNE 210
Query: 474 NGDVYSFGIMLME 486
D+YS GI+ E
Sbjct: 211 KIDMYSLGIIFFE 223
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL +++FG + S +T T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIANFGWS----VHAPSSRRTTLCGTLDYLPPEM 180
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 82/203 (40%), Gaps = 23/203 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
+++E P+G L L + L + + + + A+ YL S+ +H D+ N+L
Sbjct: 101 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNIL 157
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ L DFG+++ + ED L I +M+PE + +T DV+ F + +
Sbjct: 158 VASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRFTTASDVWMFAVCM 216
Query: 485 METFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFN 544
E + K + FF W+ + I V+E K + C ++
Sbjct: 217 WEILSFGK---QPFF-------WLENKDVIGVLE---------KGDRLPKPDLCPPVLYT 257
Query: 545 LAMKCTVESPEQRINAKEIVTRL 567
L +C P R E+V L
Sbjct: 258 LMTRCWDYDPSDRPRFTELVCSL 280
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
++ E+M +G+L L N + L + ++SA+EYL IH DL N
Sbjct: 84 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 140
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N + ++DFG+++ L+ D I + APE + S DV++FG++
Sbjct: 141 LVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 199
Query: 484 LMETFT 489
L E T
Sbjct: 200 LWEIAT 205
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 82/203 (40%), Gaps = 23/203 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
+++E P+G L L + L + + + + A+ YL S+ +H D+ N+L
Sbjct: 89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNIL 145
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ L DFG+++ + ED L I +M+PE + +T DV+ F + +
Sbjct: 146 VASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRFTTASDVWMFAVCM 204
Query: 485 METFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFN 544
E + K + FF W+ + I V+E K + C ++
Sbjct: 205 WEILSFGK---QPFF-------WLENKDVIGVLE---------KGDRLPKPDLCPPVLYT 245
Query: 545 LAMKCTVESPEQRINAKEIVTRL 567
L +C P R E+V L
Sbjct: 246 LMTRCWDYDPSDRPRFTELVCSL 268
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 114/293 (38%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+++ MP G L + + LN + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 235
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
E K E C ++ + +KC + + R +E++ K+
Sbjct: 236 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 279
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S + T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRXXLCGTLDYLPPEM 177
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 26/214 (12%)
Query: 297 NNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGR--AFKSFDIECDMXXXXXXXXXXXXX 354
LIG+G FG VY R EVA+++ D++ K+F E
Sbjct: 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95
Query: 355 XXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 414
A++ +L + + +LD+ + I ++ + YLH + I+
Sbjct: 96 GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGIL 152
Query: 415 HCDLKPSNVLLDDNMVAHLSDFGM------AKPLLKEDQSLTQTQTLATIGYMAPEYGRE 468
H DLK NV D+ V ++DFG+ + +ED+ Q L ++APE R+
Sbjct: 153 HKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQNGWLC---HLAPEIIRQ 208
Query: 469 GQ---------VSTNGDVYSFGIMLMETFTRKKP 493
S + DV++ G + E R+ P
Sbjct: 209 LSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S + T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRAALCGTLDYLPPEM 177
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 86/218 (39%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 86
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+P G + L + R + EYLH
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 144
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + +L T Y+APE
Sbjct: 145 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC-----GTPEYLAPEIIL 197
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 198 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 231
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 114/293 (38%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 13 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 71
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+++ MP G L + + LN + +
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 130
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 131 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 187
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 236
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
E K E C ++ + +KC + + R +E++ K+
Sbjct: 237 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 280
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 24/200 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
++ E+M +G+L L N + L + ++SA+EYL IH +L N
Sbjct: 293 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNC 349
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N + ++DFG+++ L+ D I + APE + S DV++FG++
Sbjct: 350 LVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 408
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
L E T +G + P +++ L +KD C ++
Sbjct: 409 LWEIAT---------YG----------MSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 449
Query: 544 NLAMKCTVESPEQRINAKEI 563
L C +P R + EI
Sbjct: 450 ELMRACWQWNPSDRPSFAEI 469
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 114/293 (38%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+++ MP G L + + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 232
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
E K E C ++ + +KC + + R +E++ K+
Sbjct: 233 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S + T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRXXLCGTLDYLPPEM 180
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 114/293 (38%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 10 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 68
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+++ MP G L + + LN + +
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 127
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 128 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 184
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 233
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
E K E C ++ + +KC + + R +E++ K+
Sbjct: 234 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 277
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S + T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRAALCGTLDYLPPEM 180
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 16/193 (8%)
Query: 300 IGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXX 357
+G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 358 XXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIH 415
D L+LEY P G++ + L + D + + ++A+AL Y H S +IH
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCH---SKRVIH 135
Query: 416 CDLKPSNVLLDDNMVAHLSDFGMA--KPLLKEDQSLTQTQTLATIGYMAPEYGREGQVST 473
D+KP N+LL N ++DFG + P + D T+ Y+ PE
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWSVHAPSSRRD------TLCGTLDYLPPEMIEGRMHDE 189
Query: 474 NGDVYSFGIMLME 486
D++S G++ E
Sbjct: 190 KVDLWSLGVLCYE 202
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S + T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRDDLCGTLDYLPPEM 180
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 126
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL +++FG + S +T T+ Y+ PE
Sbjct: 127 H---SKRVIHRDIKPENLLLGSAGELKIANFGWS----VHAPSSRRTTLCGTLDYLPPEM 179
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 114/293 (38%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+++ MP G L + + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 234
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
E K E C ++ + +KC + + R +E++ K+
Sbjct: 235 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 114/293 (38%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 10 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 68
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+++ MP G L + + LN + +
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI 127
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 128 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 184
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 233
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
E K E C ++ + +KC + + R +E++ K+
Sbjct: 234 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 277
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 12/208 (5%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 126
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY 465
H S +IH D+KP N+LL ++DFG + S + T+ Y+ PE
Sbjct: 127 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRXXLCGTLDYLPPEM 179
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKP 493
D++S G++ E K P
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 82/203 (40%), Gaps = 23/203 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
+++E P+G L L + L + + + + A+ YL S+ +H D+ N+L
Sbjct: 85 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNIL 141
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ L DFG+++ + ED L I +M+PE + +T DV+ F + +
Sbjct: 142 VASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRFTTASDVWMFAVCM 200
Query: 485 METFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFN 544
E + K + FF W+ + I V+E K + C ++
Sbjct: 201 WEILSFGK---QPFF-------WLENKDVIGVLE---------KGDRLPKPDLCPPVLYT 241
Query: 545 LAMKCTVESPEQRINAKEIVTRL 567
L +C P R E+V L
Sbjct: 242 LMTRCWDYDPSDRPRFTELVCSL 264
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 113/267 (42%), Gaps = 28/267 (10%)
Query: 300 IGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXX 358
IG G G V AR + G +VAVK+ DL+ + + E +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 359 XDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
+ +++E++ G+L + S L+ Q + V AL YLH + +IH D+
Sbjct: 113 VGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDI 167
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
K ++LL + LSDFG + K+ + + T +MAPE +T D++
Sbjct: 168 KSDSILLTLDGRVKLSDFGFCAQISKDVPK--RKXLVGTPYWMAPEVISRSLYATEVDIW 225
Query: 479 SFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVME-IVDANLLSQKDEHFTTKGQ 537
S GIM++E + P +F D P+ M+ + D+ K+ H +
Sbjct: 226 SLGIMVIEMVDGEPP----YFSDS----------PVQAMKRLRDSPPPKLKNSHKVS--- 268
Query: 538 CVSFIFNLAMKCTVESPEQRINAKEIV 564
+ + + V P++R A+E++
Sbjct: 269 --PVLRDFLERMLVRDPQERATAQELL 293
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 86/218 (39%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 101
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+P G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + +L T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC-----GTPEYLAPEIIL 212
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 246
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 87/210 (41%), Gaps = 16/210 (7%)
Query: 290 ATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQYGRAFKSFDIECDMXXXXXX 347
A F +G+G FG+VY AR Q +A+KV F Q +A + ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 348 XXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
D L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 125
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMA--KPLLKEDQSLTQTQTLATIGYMAP 463
H S +IH D+KP N+LL ++DFG + P + D T+ Y+ P
Sbjct: 126 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD------TLCGTLDYLPP 176
Query: 464 EYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
E D++S G++ E K P
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 85/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F IG G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 91/229 (39%), Gaps = 23/229 (10%)
Query: 271 ANMPRISNQRRFTYLEIFQATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKV-FDLQY 328
A MP+ R+FT + F +G+G FG+VY AR Q+ +A+KV F Q
Sbjct: 4 AEMPK----RKFT-------IDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL 52
Query: 329 GRAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKA--LVLEYMPHGSLEKCLYSSNYIL 386
+ + ++ D K L+LE+ P G L K L
Sbjct: 53 EKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-F 111
Query: 387 DIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED 446
D + M ++A AL Y H +IH D+KP N+L+ ++DFG +
Sbjct: 112 DEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS----VHA 164
Query: 447 QSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTD 495
SL + T+ Y+ PE D++ G++ E P D
Sbjct: 165 PSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 25/135 (18%)
Query: 362 FKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPS 421
F LV + M G L L + L + +IM + A+ +LH I+H DLKP
Sbjct: 174 FMFLVFDLMRKGELFDYL-TEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPE 229
Query: 422 NVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE------------YGREG 469
N+LLDDNM LSDFG + L + + T GY+APE YG+E
Sbjct: 230 NILLDDNMQIRLSDFGFSCHL---EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKE- 285
Query: 470 QVSTNGDVYSFGIML 484
D+++ G++L
Sbjct: 286 -----VDLWACGVIL 295
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 101
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+P G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 159
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 246
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 95/229 (41%), Gaps = 52/229 (22%)
Query: 289 QATNGFSEN----NLIGRGGFGSVYKARIQDGM--EVAVKVFDLQYGRAFKSFDI----- 337
+T+GF EN ++GRG SV + I E AVK+ D+ G +F + ++
Sbjct: 10 HSTHGFYENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELRE 68
Query: 338 ----ECD-MXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSL-----EKCLYSSNYILD 387
E D + + F LV + M G L EK S
Sbjct: 69 ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 388 IFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447
I + L ++V AL L+ I+H DLKP N+LLDD+M L+DFG + L D
Sbjct: 129 IMRAL---LEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL---DP 176
Query: 448 SLTQTQTLATIGYMAPE------------YGREGQVSTNGDVYSFGIML 484
+ T Y+APE YG+E D++S G+++
Sbjct: 177 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIM 219
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 415 HCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ-TQTLATIGYMAPEYGREGQVST 473
H D+KP N+L+ + A+L DFG+A D+ LTQ T+ T+ Y APE E +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIAS--ATTDEKLTQLGNTVGTLYYXAPERFSESHATY 214
Query: 474 NGDVYSFGIMLMETFTRKKP 493
D+Y+ +L E T P
Sbjct: 215 RADIYALTCVLYECLTGSPP 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 97/239 (40%), Gaps = 20/239 (8%)
Query: 265 KPLP----NDANMPRISNQRRFTYLEIFQATNGFSENNLIGRGGFGSVYKAR-IQDGMEV 319
+PLP N+ S Q+ + A F +G+G FG+VY AR Q +
Sbjct: 3 QPLPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFIL 62
Query: 320 AVKV-FDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKA--LVLEYMPHGSLE 376
A+KV F Q +A + ++ D L+LEY P G++
Sbjct: 63 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 122
Query: 377 KCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDF 436
+ L + D + + ++A+AL Y H S +IH D+KP N+LL ++DF
Sbjct: 123 RELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 178
Query: 437 GMA--KPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
G + P + D T+ Y+ PE D++S G++ E K P
Sbjct: 179 GWSVHAPSSRRD------DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 24/200 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
++ E+M +G+L L N + L + ++SA+EYL IH DL N
Sbjct: 84 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 140
Query: 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L+ +N + ++DFG+++ L+ D I + APE + S DV++FG++
Sbjct: 141 LVGENHLVKVADFGLSR-LMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 199
Query: 484 LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
L E T +G + P ++ L +KD C ++
Sbjct: 200 LWEIAT---------YG----------MSPYPGIDPSQVYELLEKDYRMERPEGCPEKVY 240
Query: 544 NLAMKCTVESPEQRINAKEI 563
L C +P R + EI
Sbjct: 241 ELMRACWQWNPSDRPSFAEI 260
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 15/208 (7%)
Query: 299 LIGR-GGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXX 356
+IG G FG VYKA+ ++ + A KV D + + + +E D+
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 357 XXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 416
++ +++E+ G+++ + L Q + AL YLH IIH
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHR 132
Query: 417 DLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIGYMAPEY-----GREG 469
DLK N+L + L+DFG++ K ++ Q + + T +MAPE ++
Sbjct: 133 DLKAGNILFTLDGDIKLADFGVSA---KNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDR 189
Query: 470 QVSTNGDVYSFGIMLMETFTRKKPTDEI 497
DV+S GI L+E + P E+
Sbjct: 190 PYDYKADVWSLGITLIEMAEIEPPHHEL 217
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
LV+E G L K L + + ++ V+ ++YL +H DL NVL
Sbjct: 86 LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVL 142
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLT-QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L + A +SDFG++K L +D T ++ + + APE + S+ DV+S+G+
Sbjct: 143 LVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVT 202
Query: 484 LMETFT 489
+ E +
Sbjct: 203 MWEALS 208
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
LE +H + I+H DLKP+N L+ D M+ L DFG+A + + S+ + + T+ YM
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 179
Query: 462 APEYGREGQVS-TNG----------DVYSFGIMLMETFTRKKPTDEIF 498
PE ++ S NG DV+S G +L K P +I
Sbjct: 180 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 227
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 101
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+P G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 246
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 93
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+P G + L + R + EYLH
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 151
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 204
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 238
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQT 452
++M L++LH I+H DLKP N+L+ L+DFG+A+ +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALA 169
Query: 453 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
+ T+ Y APE + +T D++S G + E F RK
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
LE +H + I+H DLKP+N L+ D M+ L DFG+A + + S+ + + T+ YM
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 175
Query: 462 APEYGREGQVS-TNG----------DVYSFGIMLMETFTRKKPTDEIF 498
PE ++ S NG DV+S G +L K P +I
Sbjct: 176 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 223
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 82/198 (41%), Gaps = 12/198 (6%)
Query: 300 IGRGGFGSVYKARIQDG-MEVAVKV-FDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXX 357
+G+G FG+VY AR + VA+KV F Q + + ++
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 358 XXDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIH 415
D + L+LEY P G L K L S D + IM ++A AL Y H +IH
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQKSC-TFDEQRTATIMEELADALMYCH---GKKVIH 146
Query: 416 CDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG 475
D+KP N+LL ++DFG + SL + T+ Y+ PE +
Sbjct: 147 RDIKPENLLLGLKGELKIADFGWS----VHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKV 202
Query: 476 DVYSFGIMLMETFTRKKP 493
D++ G++ E P
Sbjct: 203 DLWCIGVLCYELLVGNPP 220
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 90/218 (41%), Gaps = 23/218 (10%)
Query: 298 NLIGRGGFGSVYKARIQDG--------MEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXX 349
++G+GG+G V++ R G M+V K ++ + E ++
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 350 XXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 409
L+LEY+ G L L ++ + +++ AL +LH
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLH--- 138
Query: 410 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG 469
II+ DLKP N++L+ L+DFG+ K + D ++T T TI YMAPE
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI-HDGTVTHT-FCGTIEYMAPEILMRS 196
Query: 470 QVSTNGDVYSFGIMLMETFT---------RKKPTDEIF 498
+ D +S G ++ + T RKK D+I
Sbjct: 197 GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 113/293 (38%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 13 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 71
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+++ MP G L + + LN + +
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 130
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG AK L E++ I
Sbjct: 131 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 187
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 236
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
E K E C ++ + +KC + + R +E++ K+
Sbjct: 237 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 280
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 86/218 (39%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K +IE +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKEIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+++D ++DFG+AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 113/293 (38%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+ + MP G L + + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 232
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
E K E C ++ + +KC + + R +E++ K+
Sbjct: 233 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 113/293 (38%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+ + MP G L + + LN + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 235
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
E K E C ++ + +KC + + R +E++ K+
Sbjct: 236 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 279
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 113/293 (38%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+ + MP G L + + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 234
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
E K E C ++ + +KC + + R +E++ K+
Sbjct: 235 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
LE +H + I+H DLKP+N L+ D M+ L DFG+A + + S+ + + T+ YM
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 176
Query: 462 APEYGREGQVS-TNG----------DVYSFGIMLMETFTRKKPTDEIF 498
PE ++ S NG DV+S G +L K P +I
Sbjct: 177 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 113/293 (38%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+ + MP G L + + LN + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 235
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
E K E C ++ + +KC + + R +E++ K+
Sbjct: 236 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 279
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 392 LNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ 451
L M+D+A +EYL + +H DL N +L D+M ++DFG++K + D
Sbjct: 150 LKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQG 206
Query: 452 TQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTR 490
+ ++A E + ++ DV++FG+ + E TR
Sbjct: 207 RIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATR 245
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 113/293 (38%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 16 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+ + MP G L + + LN + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 239
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
E K E C ++ + +KC + + R +E++ K+
Sbjct: 240 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 113/293 (38%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+++ MP G L + + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG AK L E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 234
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
E K E C ++ + +KC + + R +E++ K+
Sbjct: 235 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 93
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+P G + L + R + EYLH
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 151
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 204
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 238
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 67/155 (43%), Gaps = 9/155 (5%)
Query: 44 ELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPS----TLWNLKDILYLDLSSNFL 99
+LD NKL F LT LR LYL NKL ++P+ L NL+ + D L
Sbjct: 41 KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQAL 100
Query: 100 LIG---NLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDXXXXX 156
IG L L ++ L N + P L L YL L YN LQ S+P + D
Sbjct: 101 PIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSL 159
Query: 157 XXXXXXXXXXGTIPI-SLEKLLDLKDINVSFNKLE 190
+P + +KL +LK + + N+L+
Sbjct: 160 KELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK 194
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 19/146 (13%)
Query: 7 SIPIAVGK-LQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTN 65
++P + K L+ L+ L + DN+L+ +L L EL N+L P F +LT
Sbjct: 75 TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTK 134
Query: 66 LRNLYLGSNKLTSIPSTLWNLKDILYLDLSSNFLLIGNLKVLVQVDLSMNNFSDVIPTTI 125
L L LG N+L S+P +++ L L ++ L N V
Sbjct: 135 LTYLSLGYNELQSLPKGVFD-----------------KLTSLKELRLYNNQLKRVPEGAF 177
Query: 126 GGLKDLQYLFLEYNRLQGSIPDSIGD 151
L +L+ L L+ N+L+ +P+ D
Sbjct: 178 DKLTELKTLKLDNNQLK-RVPEGAFD 202
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLC-RLAALFELDSGGNKLDGFVPACF 60
N L P L KL LSL N+L+ S+P + +L +L EL N+L F
Sbjct: 119 NQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRVPEGAF 177
Query: 61 GNLTNLRNLYLGSNKLTSIP 80
LT L+ L L +N+L +P
Sbjct: 178 DKLTELKTLKLDNNQLKRVP 197
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
LE +H + I+H DLKP+N L+ D M+ L DFG+A + + S+ + + T+ YM
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 195
Query: 462 APEYGREGQVS-TNG----------DVYSFGIMLMETFTRKKPTDEIF 498
PE ++ S NG DV+S G +L K P +I
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 243
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 94/213 (44%), Gaps = 15/213 (7%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXX 350
F + IG G +G VYKAR + G VA+K L S I E +
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE--YGRE 468
++H DLKP N+L++ L+DFG+A+ + T T + T+ Y APE G +
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGXK 186
Query: 469 GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
ST D++S G + E TR+ +F GD
Sbjct: 187 -YYSTAVDIWSLGCIFAEMVTRRA----LFPGD 214
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 113/293 (38%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+ + MP G L + + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 232
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
E K E C ++ + +KC + + R +E++ K+
Sbjct: 233 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 94/213 (44%), Gaps = 15/213 (7%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXX 350
F + IG G +G VYKAR + G VA+K L S I E +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE--YGRE 468
++H DLKP N+L++ L+DFG+A+ + T T + T+ Y APE G +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGXK 179
Query: 469 GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
ST D++S G + E TR+ +F GD
Sbjct: 180 -YYSTAVDIWSLGCIFAEMVTRR----ALFPGD 207
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 94/229 (41%), Gaps = 52/229 (22%)
Query: 289 QATNGFSEN----NLIGRGGFGSVYKARIQDGM--EVAVKVFDLQYGRAFKSFDI----- 337
+T+GF EN ++GRG SV + I E AVK+ D+ G +F + ++
Sbjct: 10 HSTHGFYENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELRE 68
Query: 338 ----ECD-MXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSL-----EKCLYSSNYILD 387
E D + + F LV + M G L EK S
Sbjct: 69 ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 388 IFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447
I + L ++V AL L+ I+H DLKP N+LLDD+M L+DFG + L D
Sbjct: 129 IMRAL---LEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL---DP 176
Query: 448 SLTQTQTLATIGYMAPE------------YGREGQVSTNGDVYSFGIML 484
T Y+APE YG+E D++S G+++
Sbjct: 177 GEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIM 219
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 95/227 (41%), Gaps = 17/227 (7%)
Query: 274 PRISNQRRFTYLEIFQATNGFSENNLIGRGGFGSVYKARIQDGMEV-AVKVFDLQYGRAF 332
P ++ +R L+I F + ++G+G FG V+ A + + A+K L+
Sbjct: 1 PELNKER--PSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVL 56
Query: 333 KSFDIECDMXXXXXXXXX------XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYIL 386
D+EC M + V+EY+ G L + S +
Sbjct: 57 MDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-HKF 115
Query: 387 DIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED 446
D+ + ++ L++LH S I++ DLK N+LLD + ++DFGM K + D
Sbjct: 116 DLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD 172
Query: 447 QSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
T Y+APE + + + D +SFG++L E + P
Sbjct: 173 AK--TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
LE +H + I+H DLKP+N L+ D M+ L DFG+A + + S+ + + T+ YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 462 APEYGREGQVS-TNG----------DVYSFGIMLMETFTRKKPTDEIF 498
PE ++ S NG DV+S G +L K P +I
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 113/293 (38%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 15 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 73
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+ + MP G L + + LN + +
Sbjct: 74 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 132
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 133 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 189
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 190 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 238
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
E K E C ++ + +KC + + R +E++ K+
Sbjct: 239 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 282
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 113/293 (38%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 6 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 64
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+ + MP G L + + LN + +
Sbjct: 65 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 123
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 124 AEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 180
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 181 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 229
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
E K E C ++ + +KC + + R +E++ K+
Sbjct: 230 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 273
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
LE +H + I+H DLKP+N L+ D M+ L DFG+A + + S+ + + T+ YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 462 APEYGREGQVS-TNG----------DVYSFGIMLMETFTRKKPTDEIF 498
PE ++ S NG DV+S G +L K P +I
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 64 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 121
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+P G + L + R + EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 179
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 232
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 266
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 113/293 (38%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 34 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 92
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+ + MP G L + + LN + +
Sbjct: 93 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 151
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 152 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 208
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 209 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 257
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
E K E C ++ + +KC + + R +E++ K+
Sbjct: 258 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 301
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 113/293 (38%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 3 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 61
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+ + MP G L + + LN + +
Sbjct: 62 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 120
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 121 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 177
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 178 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 226
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
E K E C ++ + +KC + + R +E++ K+
Sbjct: 227 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 270
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 101
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+P G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 246
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQT 452
++M L++LH I+H DLKP N+L+ L+DFG+A+ +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALD 169
Query: 453 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
+ T+ Y APE + +T D++S G + E F RK
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 86/218 (39%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K +IE +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKEIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+++D ++DFG+AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 101
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+P G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 246
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 101
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+P G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 246
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXX 350
F + IG G +G VYKAR + G VA+K L S I E +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ 470
++H DLKP N+L++ L+DFG+A+ + T T + T+ Y APE +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCK 178
Query: 471 -VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
ST D++S G + E TR+ +F GD
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRA----LFPGD 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 82/206 (39%), Gaps = 23/206 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
+++E G L L Y LD+ + +++AL YL S +H D+ NVL
Sbjct: 115 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 171
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ N L DFG+++ +++ ++ I +MAPE + ++ DV+ FG+ +
Sbjct: 172 VSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 230
Query: 485 METFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFN 544
E L H V P ++ D + E C +++
Sbjct: 231 WE----------------ILMHGVK---PFQGVKNNDVIGRIENGERLPMPPNCPPTLYS 271
Query: 545 LAMKCTVESPEQRINAKEIVTRLLKI 570
L KC P +R E+ +L I
Sbjct: 272 LMTKCWAYDPSRRPRFTELKAQLSTI 297
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 12 VGKLQKLQLLSLEDNQLE--GSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNL 69
+G L L LSL NQL+ G+ L L L +LD N++ P LT L L
Sbjct: 213 LGILTNLDELSLNGNQLKDIGT----LASLTNLTDLDLANNQISNLAP--LSGLTKLTEL 266
Query: 70 YLGSNKLTSIPSTLWNLKDILYLDLSSNFLL----IGNLKVLVQVDLSMNNFSDVIPTTI 125
LG+N++++I S L L + L+L+ N L I NLK L + L NN SD+ P +
Sbjct: 267 KLGANQISNI-SPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--V 323
Query: 126 GGLKDLQYLFLEYNRL 141
L LQ LF N++
Sbjct: 324 SSLTKLQRLFFSNNKV 339
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 15 LQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSN 74
L KL + + +NQ+ P L L L L N++ P NLTNL L L SN
Sbjct: 84 LTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSN 139
Query: 75 KLTSIPSTLWNLKDILYLDLSSNFLL----IGNLKVLVQVDLSMNNFSDVIPTTIGGLKD 130
++ I S L L + L SSN + + NL L ++D+S N SD+ + + L +
Sbjct: 140 TISDI-SALSGLTSLQQLSFSSNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTN 196
Query: 131 LQYLFLEYNRLQGSIP 146
L+ L N++ P
Sbjct: 197 LESLIATNNQISDITP 212
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQT 452
+ + + AL YL + V IH D+KPSN+LLD+ L DFG++ L+ + +
Sbjct: 128 KMTVAIVKALYYLKEKHGV--IHRDVKPSNILLDERGQIKLCDFGISGRLVDDK---AKD 182
Query: 453 QTLATIGYMAPEY-----GREGQVSTNGDVYSFGIMLMETFTRKKP 493
++ YMAPE + DV+S GI L+E T + P
Sbjct: 183 RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXX 350
F + IG G +G VYKAR + G VA+K L S I E +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ 470
++H DLKP N+L++ L+DFG+A+ + T T + T+ Y APE +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCK 179
Query: 471 -VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
ST D++S G + E TR+ +F GD
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA----LFPGD 207
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 82/206 (39%), Gaps = 23/206 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
+++E G L L Y LD+ + +++AL YL S +H D+ NVL
Sbjct: 87 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 143
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ N L DFG+++ +++ ++ I +MAPE + ++ DV+ FG+ +
Sbjct: 144 VSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 202
Query: 485 METFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFN 544
E L H V P ++ D + E C +++
Sbjct: 203 WE----------------ILMHGVK---PFQGVKNNDVIGRIENGERLPMPPNCPPTLYS 243
Query: 545 LAMKCTVESPEQRINAKEIVTRLLKI 570
L KC P +R E+ +L I
Sbjct: 244 LMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 12 VGKLQKLQLLSLEDNQLE--GSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNL 69
+G L L LSL NQL+ G+ L L L +LD N++ P LT L L
Sbjct: 212 LGILTNLDELSLNGNQLKDIGT----LASLTNLTDLDLANNQISNLAP--LSGLTKLTEL 265
Query: 70 YLGSNKLTSIPSTLWNLKDILYLDLSSNFLL----IGNLKVLVQVDLSMNNFSDVIPTTI 125
LG+N++++I S L L + L+L+ N L I NLK L + L NN SD+ P +
Sbjct: 266 KLGANQISNI-SPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--V 322
Query: 126 GGLKDLQYLFLEYNRL 141
L LQ LF N++
Sbjct: 323 SSLTKLQRLFFSNNKV 338
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 32/160 (20%)
Query: 12 VGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYL 71
V L L ++ +NQL P L L L ++ N++ P NLTNL L L
Sbjct: 59 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 114
Query: 72 GSNKLTSIPSTLWNLKDILYLDLSSNFLL-------------------------IGNLKV 106
+N++T I L NL ++ L+LSSN + + NL
Sbjct: 115 FNNQITDI-DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFGNQVTDLKPLANLTT 173
Query: 107 LVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIP 146
L ++D+S N SD+ + + L +L+ L N++ P
Sbjct: 174 LERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP 211
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 44 FERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRIQQAVNF 101
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +VLEY P G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 246
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 82/206 (39%), Gaps = 23/206 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
+++E G L L Y LD+ + +++AL YL S +H D+ NVL
Sbjct: 87 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 143
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ N L DFG+++ +++ ++ I +MAPE + ++ DV+ FG+ +
Sbjct: 144 VSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 202
Query: 485 METFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFN 544
E L H V P ++ D + E C +++
Sbjct: 203 WE----------------ILMHGVK---PFQGVKNNDVIGRIENGERLPMPPNCPPTLYS 243
Query: 545 LAMKCTVESPEQRINAKEIVTRLLKI 570
L KC P +R E+ +L I
Sbjct: 244 LMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 9/195 (4%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXXXXXXXXX 357
+G G +G VYKA+ G VA+K L S I E +
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 417
+ LV E+M L+K L + L Q I I + L + + I+H D
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 418 LKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY-GREGQVSTNGD 476
LKP N+L++ + L+DFG+A+ +S T + T+ Y AP+ + ST+ D
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKKYSTSVD 202
Query: 477 VYSFGIMLMETFTRK 491
++S G + E T K
Sbjct: 203 IWSIGCIFAEMITGK 217
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 82/206 (39%), Gaps = 23/206 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
+++E G L L Y LD+ + +++AL YL S +H D+ NVL
Sbjct: 92 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 148
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ N L DFG+++ +++ ++ I +MAPE + ++ DV+ FG+ +
Sbjct: 149 VSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 207
Query: 485 METFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFN 544
E L H V P ++ D + E C +++
Sbjct: 208 WE----------------ILMHGVK---PFQGVKNNDVIGRIENGERLPMPPNCPPTLYS 248
Query: 545 LAMKCTVESPEQRINAKEIVTRLLKI 570
L KC P +R E+ +L I
Sbjct: 249 LMTKCWAYDPSRRPRFTELKAQLSTI 274
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 9/195 (4%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXXXXXXXXX 357
+G G +G VYKA+ G VA+K L S I E +
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 417
+ LV E+M L+K L + L Q I I + L + + I+H D
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 418 LKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY-GREGQVSTNGD 476
LKP N+L++ + L+DFG+A+ +S T + T+ Y AP+ + ST+ D
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKKYSTSVD 202
Query: 477 VYSFGIMLMETFTRK 491
++S G + E T K
Sbjct: 203 IWSIGCIFAEMITGK 217
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXX 350
F + IG G +G VYKAR + G VA+K L S I E +
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ 470
++H DLKP N+L++ L+DFG+A+ + T T + T+ Y APE +
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCK 186
Query: 471 -VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
ST D++S G + E TR+ +F GD
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRA----LFPGD 214
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXX 350
F + IG G +G VYKAR + G VA+K L S I E +
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ 470
++H DLKP N+L++ L+DFG+A+ + T T + T+ Y APE +
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCK 183
Query: 471 -VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
ST D++S G + E TR+ +F GD
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRA----LFPGD 211
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXX 350
F + IG G +G VYKAR + G VA+K L S I E +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ 470
++H DLKP N+L++ L+DFG+A+ + T T + T+ Y APE +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCK 179
Query: 471 -VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
ST D++S G + E TR+ +F GD
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR----ALFPGD 207
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXX 350
F + IG G +G VYKAR + G VA+K L S I E +
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ 470
++H DLKP N+L++ L+DFG+A+ + T T + T+ Y APE +
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCK 180
Query: 471 -VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
ST D++S G + E TR+ +F GD
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRR----ALFPGD 208
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 82/206 (39%), Gaps = 23/206 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
+++E G L L Y LD+ + +++AL YL S +H D+ NVL
Sbjct: 90 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 146
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ N L DFG+++ +++ ++ I +MAPE + ++ DV+ FG+ +
Sbjct: 147 VSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 205
Query: 485 METFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFN 544
E L H V P ++ D + E C +++
Sbjct: 206 WE----------------ILMHGVK---PFQGVKNNDVIGRIENGERLPMPPNCPPTLYS 246
Query: 545 LAMKCTVESPEQRINAKEIVTRLLKI 570
L KC P +R E+ +L I
Sbjct: 247 LMTKCWAYDPSRRPRFTELKAQLSTI 272
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXX 350
F + IG G +G VYKAR + G VA+K L S I E +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ 470
++H DLKP N+L++ L+DFG+A+ + T T + T+ Y APE +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCK 179
Query: 471 -VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
ST D++S G + E TR+ +F GD
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA----LFPGD 207
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 102/254 (40%), Gaps = 28/254 (11%)
Query: 288 FQATNGFSENNLIGRGGFG-SVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXX 346
FQ+ + IG G FG ++ +DG + +K ++ S + E
Sbjct: 20 FQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINIS---RMSSKEREESRREVAV 76
Query: 347 XXXXXXXXXXXXXDDFKA-----LVLEYMPHGSLEK-------CLYSSNYILDIFQRLNI 394
+ F+ +V++Y G L K L+ + ILD F
Sbjct: 77 LANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWF----- 131
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT 454
+ + AL+++H I+H D+K N+ L + L DFG+A+ +L L +
Sbjct: 132 -VQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIAR-VLNSTVELARA-C 185
Query: 455 LATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPI 514
+ T Y++PE + D+++ G +L E T K + ++ LK P+
Sbjct: 186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPV 245
Query: 515 SVMEIVD-ANLLSQ 527
S+ D +L+SQ
Sbjct: 246 SLHYSYDLRSLVSQ 259
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXX 350
F + IG G +G VYKAR + G VA+K L S I E +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ 470
++H DLKP N+L++ L+DFG+A+ + T T + T+ Y APE +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCK 178
Query: 471 -VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
ST D++S G + E TR+ +F GD
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRA----LFPGD 206
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
V+EY+ G L + + + R +++ AL YLH II+ DLK NVL
Sbjct: 98 FVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGIIYRDLKLDNVL 153
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
LD L+D+GM K L+ T + T Y+APE R + D ++ G+++
Sbjct: 154 LDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLM 211
Query: 485 METFTRKKPTD 495
E + P D
Sbjct: 212 FEMMAGRSPFD 222
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
V+EY+ G L + + + R +++ AL YLH II+ DLK NVL
Sbjct: 87 FVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGIIYRDLKLDNVL 142
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
LD L+D+GM K L+ T + T Y+APE R + D ++ G+++
Sbjct: 143 LDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLM 200
Query: 485 METFTRKKPTD 495
E + P D
Sbjct: 201 FEMMAGRSPFD 211
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 82/206 (39%), Gaps = 23/206 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
+++E G L L Y LD+ + +++AL YL S +H D+ NVL
Sbjct: 89 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 145
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ N L DFG+++ +++ ++ I +MAPE + ++ DV+ FG+ +
Sbjct: 146 VSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 204
Query: 485 METFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFN 544
E L H V P ++ D + E C +++
Sbjct: 205 WE----------------ILMHGVK---PFQGVKNNDVIGRIENGERLPMPPNCPPTLYS 245
Query: 545 LAMKCTVESPEQRINAKEIVTRLLKI 570
L KC P +R E+ +L I
Sbjct: 246 LMTKCWAYDPSRRPRFTELKAQLSTI 271
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 87/212 (41%), Gaps = 24/212 (11%)
Query: 288 FQATNGFSENNLIGRGGFGSVYKARIQD-GMEVAVKVF-DLQYGRAFKSFDI-ECDMXXX 344
FQ+ + L+G G +G V K R +D G VA+K F + + K + E +
Sbjct: 21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80
Query: 345 XXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKC-LYSSNYILDIFQRLNIMIDVASALE 403
LV E++ H L+ L+ + + Q+ I +
Sbjct: 81 LRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQI-----IN 135
Query: 404 YLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
+ F +S IIH D+KP N+L+ + V L DFG A+ L + +AT Y AP
Sbjct: 136 GIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYDDEVATRWYRAP 193
Query: 464 E-------YGREGQVSTNGDVYSFGIMLMETF 488
E YG+ DV++ G ++ E F
Sbjct: 194 ELLVGDVKYGKA------VDVWAIGCLVTEMF 219
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
D+ +EYLH+ IIH D+KPSN+L+ ++ ++DFG++ D L + T+
Sbjct: 145 DLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALL--SNTVG 199
Query: 457 TIGYMAPEYGREGQVSTNG---DVYSFGIML 484
T +MAPE E + +G DV++ G+ L
Sbjct: 200 TPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQT 452
++M L++LH I+H DLKP N+L+ L+DFG+A+ +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALF 169
Query: 453 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
+ T+ Y APE + +T D++S G + E F RK
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 112/293 (38%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+ + MP G L + + LN + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 235
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
E K E C ++ + KC + + R +E++ K+
Sbjct: 236 E---------KGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 279
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 114/296 (38%), Gaps = 33/296 (11%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+ + MP G L + + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 232
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI-RD 572
E K E C ++ + KC + + R +E++ K+ RD
Sbjct: 233 E---------KGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
V+EY+ G L + + + R +++ AL YLH II+ DLK NVL
Sbjct: 83 FVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGIIYRDLKLDNVL 138
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
LD L+D+GM K L+ T + T Y+APE R + D ++ G+++
Sbjct: 139 LDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLM 196
Query: 485 METFTRKKPTD 495
E + P D
Sbjct: 197 FEMMAGRSPFD 207
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 101
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY P G + L + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 159
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+++D ++DFG AK + L T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 246
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
V+EY+ G L + + + R +++ AL YLH II+ DLK NVL
Sbjct: 130 FVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGIIYRDLKLDNVL 185
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
LD L+D+GM K L+ T + T Y+APE R + D ++ G+++
Sbjct: 186 LDSEGHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLM 243
Query: 485 METFTRKKPTD 495
E + P D
Sbjct: 244 FEMMAGRSPFD 254
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 82/206 (39%), Gaps = 23/206 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
+++E G L L Y LD+ + +++AL YL S +H D+ NVL
Sbjct: 84 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 140
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ N L DFG+++ +++ ++ I +MAPE + ++ DV+ FG+ +
Sbjct: 141 VSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 199
Query: 485 METFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFN 544
E L H V P ++ D + E C +++
Sbjct: 200 WE----------------ILMHGVK---PFQGVKNNDVIGRIENGERLPMPPNCPPTLYS 240
Query: 545 LAMKCTVESPEQRINAKEIVTRLLKI 570
L KC P +R E+ +L I
Sbjct: 241 LMTKCWAYDPSRRPRFTELKAQLSTI 266
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 12 VGKLQKLQLLSLEDNQLE--GSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNL 69
+G L L LSL NQL+ G+ L L L +LD N++ P LT L L
Sbjct: 216 LGILTNLDELSLNGNQLKDIGT----LASLTNLTDLDLANNQISNLAP--LSGLTKLTEL 269
Query: 70 YLGSNKLTSIPSTLWNLKDILYLDLSSNFLL----IGNLKVLVQVDLSMNNFSDVIPTTI 125
LG+N++++I S L L + L+L+ N L I NLK L + L NN SD+ P +
Sbjct: 270 KLGANQISNI-SPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--V 326
Query: 126 GGLKDLQYLFLEYNRL 141
L LQ LF N++
Sbjct: 327 SSLTKLQRLFFANNKV 342
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 68/161 (42%), Gaps = 32/161 (19%)
Query: 11 AVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLY 70
V L L ++ +NQL P L L L ++ N++ P NLTNL L
Sbjct: 62 GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 117
Query: 71 LGSNKLTSIPSTLWNLKDILYLDLSSNFLL-------------------------IGNLK 105
L +N++T I L NL ++ L+LSSN + + NL
Sbjct: 118 LFNNQITDI-DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 176
Query: 106 VLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIP 146
L ++D+S N SD+ + + L +L+ L N++ P
Sbjct: 177 TLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP 215
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 112/293 (38%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+++ MP G L + + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG AK L E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 234
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
E K E C ++ + KC + + R +E++ K+
Sbjct: 235 E---------KGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 278
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+++D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 112/293 (38%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 19 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 77
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+ + MP G L + + LN + +
Sbjct: 78 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 136
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 137 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 193
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 194 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 242
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
E K E C ++ + KC + + R +E++ K+
Sbjct: 243 E---------KGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 286
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
L+ L F +S ++H DLKP N+L++ L+DFG+A+ + T T + T+ Y
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYR 169
Query: 462 APEYGREGQ-VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
APE + ST D++S G + E TR+ +F GD
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGD 206
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
L+ L F +S ++H DLKP N+L++ L+DFG+A+ + T T + T+ Y
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYR 170
Query: 462 APEYGREGQ-VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
APE + ST D++S G + E TR+ +F GD
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGD 207
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
L+ L F +S ++H DLKP N+L++ L+DFG+A+ + T T + T+ Y
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYR 169
Query: 462 APEYGREGQ-VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
APE + ST D++S G + E TR+ +F GD
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGD 206
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 112/293 (38%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 16 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+ + MP G L + + LN + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG AK L E++ I
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 190
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 239
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
E K E C ++ + +KC + + R +E++ K+
Sbjct: 240 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
+ SA+EY H I+H DLKP N+LLD+++ ++DFG++ + D + +T + +
Sbjct: 116 IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSN--IMTDGNFLKT-SCGS 169
Query: 458 IGYMAPEY-GREGQVSTNGDVYSFGIMLMETFTRKKPTDE 496
Y APE + DV+S G++L R+ P D+
Sbjct: 170 PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 209
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+++D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 24/207 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
L+++ MP G L + + LN + +A + YL ++H DL NVL
Sbjct: 100 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 156
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ ++DFG+AK L E++ I +MA E + DV+S+G+ +
Sbjct: 157 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 216
Query: 485 METFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
E T KP D I +++ S++E K E C ++
Sbjct: 217 WELMTFGSKPYDGIPASEIS-----------SILE---------KGERLPQPPICTIDVY 256
Query: 544 NLAMKCTVESPEQRINAKEIVTRLLKI 570
+ +KC + + R +E++ K+
Sbjct: 257 MIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
+ SA+EY H I+H DLKP N+LLD+++ ++DFG++ + D + +T + +
Sbjct: 112 IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSN--IMTDGNFLKT-SCGS 165
Query: 458 IGYMAPEY-GREGQVSTNGDVYSFGIMLMETFTRKKPTDE 496
Y APE + DV+S G++L R+ P D+
Sbjct: 166 PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 205
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 76/177 (42%), Gaps = 34/177 (19%)
Query: 413 IIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED---------QSLTQTQTLATIGYMAP 463
+IH DLKPSN+L++ N + DFG+A+ ++ E Q T+ +AT Y AP
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLAR-IIDESAADNSEPTGQQSGMTEXVATRWYRAP 191
Query: 464 EYG-REGQVSTNGDVYSFGIMLMETFTRKK--PTDE------IFFGDMTLKHWVNDLLPI 514
E + S DV+S G +L E F R+ P + + FG + H NDL I
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCI 251
Query: 515 S---------VMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKE 562
+ + A L + KG +L + V P +RI AKE
Sbjct: 252 ESPRAREYIKSLPMYPAAPLEKMFPRVNPKG------IDLLQRMLVFDPAKRITAKE 302
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 112/293 (38%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+ + MP G L + + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG AK L E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 183
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 232
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
E K E C ++ + +KC + + R +E++ K+
Sbjct: 233 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
+ SA+EY H I+H DLKP N+LLD+++ ++DFG++ + D + +T + +
Sbjct: 121 IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSN--IMTDGNFLKT-SCGS 174
Query: 458 IGYMAPEY-GREGQVSTNGDVYSFGIMLMETFTRKKPTDE 496
Y APE + DV+S G++L R+ P D+
Sbjct: 175 PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
+ A+EY H I+H DLKP N+LLDDN+ ++DFG++ + D + +T + +
Sbjct: 117 IICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSN--IMTDGNFLKT-SCGS 170
Query: 458 IGYMAPEY-GREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
Y APE + DV+S GI+L + P D+ F ++ K
Sbjct: 171 PNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKK 219
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 22/203 (10%)
Query: 299 LIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXX 357
L+G G +G VYK R ++ G A+KV D+ G + E +M
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 358 -------XXDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGY 409
DD LV+E+ GS+ + ++ L I ++ L +LH
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH--- 146
Query: 410 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT-LATIGYMAPEY--- 465
+IH D+K NVLL +N L DFG++ L D+++ + T + T +MAPE
Sbjct: 147 QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL---DRTVGRRNTFIGTPYWMAPEVIAC 203
Query: 466 --GREGQVSTNGDVYSFGIMLME 486
+ D++S GI +E
Sbjct: 204 DENPDATYDFKSDLWSLGITAIE 226
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 18/140 (12%)
Query: 374 SLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHL 433
L KC + SN + F + + L+Y+H S ++H DLKPSN+LL+ +
Sbjct: 118 KLLKCQHLSNDHICYF-----LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKI 169
Query: 434 SDFGMAKPL-LKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRK 491
DFG+A+ D + T+ +AT Y APE + T D++S G +L E + +
Sbjct: 170 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
Query: 492 KPTDEIFFGDMTLKHWVNDL 511
IF G KH+++ L
Sbjct: 230 P----IFPG----KHYLDQL 241
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
+ SA+EY H I+H DLKP N+LLD+++ ++DFG++ + D + +T + +
Sbjct: 122 IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSN--IMTDGNFLKT-SCGS 175
Query: 458 IGYMAPEY-GREGQVSTNGDVYSFGIMLMETFTRKKPTDE 496
Y APE + DV+S G++L R+ P D+
Sbjct: 176 PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 215
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVL---LDDNMVAHLSDFGMAKPLLKEDQSL 449
++ V A++YLH + I+H DLKP N+L LD++ +SDFG++K ED
Sbjct: 120 RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGS 173
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
+ T GY+APE + S D +S G++
Sbjct: 174 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 12 VGKLQKLQLLSLEDNQLE--GSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNL 69
+G L L LSL NQL+ G+ L L L +LD N++ P LT L L
Sbjct: 213 LGILTNLDELSLNGNQLKDIGT----LASLTNLTDLDLANNQISNLAP--LSGLTKLTEL 266
Query: 70 YLGSNKLTSIPSTLWNLKDILYLDLSSNFLL----IGNLKVLVQVDLSMNNFSDVIPTTI 125
LG+N++++I S L L + L+L+ N L I NLK L + L NN SD+ P +
Sbjct: 267 KLGANQISNI-SPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--V 323
Query: 126 GGLKDLQYLFLEYNRL 141
L LQ LF N++
Sbjct: 324 SSLTKLQRLFFYNNKV 339
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 15 LQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSN 74
L KL + + +NQ+ P L L L L N++ P NLTNL L L SN
Sbjct: 84 LTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSN 139
Query: 75 KLTSIPSTLWNLKDILYLDLSSNFLL----IGNLKVLVQVDLSMNNFSDVIPTTIGGLKD 130
++ I S L L + L SSN + + NL L ++D+S N SD+ + + L +
Sbjct: 140 TISDI-SALSGLTSLQQLSFSSNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTN 196
Query: 131 LQYLFLEYNRLQGSIP 146
L+ L N++ P
Sbjct: 197 LESLIATNNQISDITP 212
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVL---LDDNMVAHLSDFGMAKPLLKEDQSL 449
++ V A++YLH + I+H DLKP N+L LD++ +SDFG++K ED
Sbjct: 120 RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGS 173
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
+ T GY+APE + S D +S G++
Sbjct: 174 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 101
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY P G + L + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+++D ++DFG AK + L T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 246
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 101
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY P G + L + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+++D ++DFG AK + L T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 246
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVL---LDDNMVAHLSDFGMAKPLLKEDQSL 449
++ V A++YLH + I+H DLKP N+L LD++ +SDFG++K ED
Sbjct: 120 RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGS 173
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
+ T GY+APE + S D +S G++
Sbjct: 174 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 12 VGKLQKLQLLSLEDNQLE--GSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNL 69
+G L L LSL NQL+ G+ L L L +LD N++ P LT L L
Sbjct: 213 LGILTNLDELSLNGNQLKDIGT----LASLTNLTDLDLANNQISNLAP--LSGLTKLTEL 266
Query: 70 YLGSNKLTSIPSTLWNLKDILYLDLSSNFLL----IGNLKVLVQVDLSMNNFSDVIPTTI 125
LG+N++++I S L L + L+L+ N L I NLK L + L NN SD+ P +
Sbjct: 267 KLGANQISNI-SPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--V 323
Query: 126 GGLKDLQYLFLEYNRL 141
L LQ LF N++
Sbjct: 324 SSLTKLQRLFFYNNKV 339
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 11/136 (8%)
Query: 15 LQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSN 74
L KL + + +NQ+ P L L L L N++ P NLTNL L L SN
Sbjct: 84 LTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSN 139
Query: 75 KLTSIPSTLWNLKDILYLDLSSNFLL----IGNLKVLVQVDLSMNNFSDVIPTTIGGLKD 130
++ I S L L + L+ SSN + + NL L ++D+S N SD+ + + L +
Sbjct: 140 TISDI-SALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTN 196
Query: 131 LQYLFLEYNRLQGSIP 146
L+ L N++ P
Sbjct: 197 LESLIATNNQISDITP 212
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 16/133 (12%)
Query: 367 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD 426
+EY + +L ++S N + + + AL Y+H S IIH DLKP N+ +D
Sbjct: 94 MEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFID 150
Query: 427 DNMVAHLSDFGMAK------PLLKED------QSLTQTQTLATIGYMAPEY-GREGQVST 473
++ + DFG+AK +LK D S T + T Y+A E G +
Sbjct: 151 ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNE 210
Query: 474 NGDVYSFGIMLME 486
D+YS GI+ E
Sbjct: 211 KIDMYSLGIIFFE 223
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 287 IFQATNGFSEN----NLIGRGGFGSVYKA-RIQDGMEVAVKVFDLQY--GRAFKSFDIEC 339
+ A+ FS+N +G+G F V + G+E A K+ + + R F+ + E
Sbjct: 20 MMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREA 79
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVA 399
+ + F LV + + G L + + + + + + +
Sbjct: 80 RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQ 135
Query: 400 SALEYLHFGYSVPIIHCDLKPSNVLLDDN---MVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
LE + + +S I+H +LKP N+LL L+DFG+A ++ + S
Sbjct: 136 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAG 192
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIML 484
T GY++PE ++ S D+++ G++L
Sbjct: 193 TPGYLSPEVLKKDPYSKPVDIWACGVIL 220
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 76/177 (42%), Gaps = 34/177 (19%)
Query: 413 IIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED---------QSLTQTQTLATIGYMAP 463
+IH DLKPSN+L++ N + DFG+A+ ++ E Q T+ +AT Y AP
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLAR-IIDESAADNSEPTGQQSGMTEYVATRWYRAP 191
Query: 464 EYG-REGQVSTNGDVYSFGIMLMETFTRKK--PTDE------IFFGDMTLKHWVNDLLPI 514
E + S DV+S G +L E F R+ P + + FG + H NDL I
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCI 251
Query: 515 S---------VMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKE 562
+ + A L + KG +L + V P +RI AKE
Sbjct: 252 ESPRAREYIKSLPMYPAAPLEKMFPRVNPKG------IDLLQRMLVFDPAKRITAKE 302
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVL---LDDNMVAHLSDFGMAKPLLKEDQSL 449
++ V A++YLH + I+H DLKP N+L LD++ +SDFG++K ED
Sbjct: 120 RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGS 173
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
+ T GY+APE + S D +S G++
Sbjct: 174 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+++D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 82/206 (39%), Gaps = 23/206 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
+++E G L L + LD+ + +++AL YL S +H D+ NVL
Sbjct: 87 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 143
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ N L DFG+++ +++ ++ I +MAPE + ++ DV+ FG+ +
Sbjct: 144 VSSNDCVKLGDFGLSR-YMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 202
Query: 485 METFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFN 544
E L H V P ++ D + E C +++
Sbjct: 203 WE----------------ILMHGVK---PFQGVKNNDVIGRIENGERLPMPPNCPPTLYS 243
Query: 545 LAMKCTVESPEQRINAKEIVTRLLKI 570
L KC P +R E+ +L I
Sbjct: 244 LMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 400 SALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG 459
+ + YLH + I H D+KP N+LLD+ +SDFG+A ++ + T+
Sbjct: 115 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 460 YMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDE 496
Y+APE + + DV+S GI+L + P D+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 400 SALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG 459
+ + YLH + I H D+KP N+LLD+ +SDFG+A ++ + T+
Sbjct: 115 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 460 YMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDE 496
Y+APE + + DV+S GI+L + P D+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 25/210 (11%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQYGRA-FKSFDIECDMXXXXXXXXXXXXXXXXX 358
+G+G +G V++ + G VAVK+F + ++ F+ +I +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTS 74
Query: 359 XDDFKALVL--EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLH---FGYS--V 411
+ L L Y HGSL L L+ L + + A L +LH FG
Sbjct: 75 RNSSTQLWLITHYHEHGSLYDFLQRQT--LEPHLALRLAVSAACGLAHLHVEIFGTQGKP 132
Query: 412 PIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS----LTQTQTLATIGYMAPEYGR 467
I H D K NVL+ N+ ++D G+A ++ S + + T YMAPE
Sbjct: 133 AIAHRDFKSRNVLVKSNLQCCIADLGLA--VMHSQGSDYLDIGNNPRVGTKRYMAPEVLD 190
Query: 468 EGQVSTN-------GDVYSFGIMLMETFTR 490
E Q+ T+ D+++FG++L E R
Sbjct: 191 E-QIRTDCFESYKWTDIWAFGLVLWEIARR 219
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 400 SALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG 459
+ + YLH + I H D+KP N+LLD+ +SDFG+A ++ + T+
Sbjct: 116 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 460 YMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDE 496
Y+APE + + DV+S GI+L + P D+
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
LE +H + I+H DLKP+N L+ D M+ L DFG+A + + + + + T+ YM
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDXXXVVKDSQVGTVNYM 195
Query: 462 APEYGREGQVS-TNG----------DVYSFGIMLMETFTRKKPTDEIF 498
PE ++ S NG DV+S G +L K P +I
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 243
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 400 SALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG 459
+ + YLH + I H D+KP N+LLD+ +SDFG+A ++ + T+
Sbjct: 115 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 460 YMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDE 496
Y+APE + + DV+S GI+L + P D+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 400 SALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG 459
+ + YLH + I H D+KP N+LLD+ +SDFG+A ++ + T+
Sbjct: 115 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 460 YMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDE 496
Y+APE + + DV+S GI+L + P D+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 400 SALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG 459
+ + YLH + I H D+KP N+LLD+ +SDFG+A ++ + T+
Sbjct: 116 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 460 YMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDE 496
Y+APE + + DV+S GI+L + P D+
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 12 VGKLQKLQLLSLEDNQLE--GSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNL 69
+G L L LSL NQL+ G+ L L L +LD N++ P LT L L
Sbjct: 217 LGILTNLDELSLNGNQLKDIGT----LASLTNLTDLDLANNQISNLAP--LSGLTKLTEL 270
Query: 70 YLGSNKLTSIPSTLWNLKDILYLDLSSNFLL----IGNLKVLVQVDLSMNNFSDVIPTTI 125
LG+N++++I S L L + L+L+ N L I NLK L + L NN SD+ P +
Sbjct: 271 KLGANQISNI-SPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--V 327
Query: 126 GGLKDLQYLFLEYNRL 141
L LQ LF N++
Sbjct: 328 SSLTKLQRLFFYNNKV 343
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 68/161 (42%), Gaps = 32/161 (19%)
Query: 11 AVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLY 70
V L L ++ +NQL P L L L ++ N++ P NLTNL L
Sbjct: 63 GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118
Query: 71 LGSNKLTSIPSTLWNLKDILYLDLSSNFLL-------------------------IGNLK 105
L +N++T I L NL ++ L+LSSN + + NL
Sbjct: 119 LFNNQITDI-DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 177
Query: 106 VLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIP 146
L ++D+S N SD+ + + L +L+ L N++ P
Sbjct: 178 TLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP 216
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 400 SALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG 459
+ + YLH + I H D+KP N+LLD+ +SDFG+A ++ + T+
Sbjct: 115 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 460 YMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDE 496
Y+APE + + DV+S GI+L + P D+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 404 YLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
YLH + I H D+KP N+LLD+ +SDFG+A ++ + T+ Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 464 EYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDE 496
E + + DV+S GI+L + P D+
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 12 VGKLQKLQLLSLEDNQLE--GSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNL 69
+G L L LSL NQL+ G+ L L L +LD N++ P LT L L
Sbjct: 212 LGILTNLDELSLNGNQLKDIGT----LASLTNLTDLDLANNQISNLAP--LSGLTKLTEL 265
Query: 70 YLGSNKLTSIPSTLWNLKDILYLDLSSNFLL----IGNLKVLVQVDLSMNNFSDVIPTTI 125
LG+N++++I S L L + L+L+ N L I NLK L + L NN SD+ P +
Sbjct: 266 KLGANQISNI-SPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--V 322
Query: 126 GGLKDLQYLFLEYNRL 141
L LQ LF N++
Sbjct: 323 SSLTKLQRLFFYNNKV 338
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 68/161 (42%), Gaps = 32/161 (19%)
Query: 11 AVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLY 70
V L L ++ +NQL P L L L ++ N++ P NLTNL L
Sbjct: 58 GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 113
Query: 71 LGSNKLTSIPSTLWNLKDILYLDLSSNFLL-------------------------IGNLK 105
L +N++T I L NL ++ L+LSSN + + NL
Sbjct: 114 LFNNQITDIDP-LKNLTNLNRLELSSNTISDISALSGLTSLQQLNFGNQVTDLKPLANLT 172
Query: 106 VLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIP 146
L ++D+S N SD+ + + L +L+ L N++ P
Sbjct: 173 TLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP 211
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
+V+EY+ G L + + ++ R + + SA++Y H ++H DLKP NVL
Sbjct: 88 MVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHM---VVHRDLKPENVL 143
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY--GREGQVSTNGDVYSFGI 482
LD +M A ++DFG++ + D +T + + Y APE GR D++S G+
Sbjct: 144 LDAHMNAKIADFGLSN--MMSDGEFLRT-SCGSPNYAAPEVISGRL-YAGPEVDIWSCGV 199
Query: 483 MLMETFTRKKPTDE 496
+L P D+
Sbjct: 200 ILYALLCGTLPFDD 213
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE-DQSLTQTQ 453
+ + L+Y+H S ++H DLKPSN+L++ + DFG+A+ E D + T+
Sbjct: 150 LYQILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTE 206
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511
+AT Y APE + T D++S G +L E + + IF G KH+++ L
Sbjct: 207 XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQL 257
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 400 SALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG 459
+ + YLH + I H D+KP N+LLD+ +SDFG+A ++ + T+
Sbjct: 116 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 460 YMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDE 496
Y+APE + + DV+S GI+L + P D+
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 400 SALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG 459
+ + YLH + I H D+KP N+LLD+ +SDFG+A ++ + T+
Sbjct: 115 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 460 YMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDE 496
Y+APE + + DV+S GI+L + P D+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 400 SALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG 459
+ + YLH + I H D+KP N+LLD+ +SDFG+A ++ + T+
Sbjct: 114 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 170
Query: 460 YMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDE 496
Y+APE + + DV+S GI+L + P D+
Sbjct: 171 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 89/218 (40%), Gaps = 23/218 (10%)
Query: 298 NLIGRGGFGSVYKARIQDG--------MEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXX 349
++G+GG+G V++ R G M+V K ++ + E ++
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 350 XXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 409
L+LEY+ G L L ++ + +++ AL +LH
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLH--- 138
Query: 410 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG 469
II+ DLKP N++L+ L+DFG+ K + D ++T TI YMAPE
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI-HDGTVTHX-FCGTIEYMAPEILMRS 196
Query: 470 QVSTNGDVYSFGIMLMETFT---------RKKPTDEIF 498
+ D +S G ++ + T RKK D+I
Sbjct: 197 GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL 234
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 400 SALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG 459
+ + YLH + I H D+KP N+LLD+ +SDFG+A ++ + T+
Sbjct: 115 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 460 YMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDE 496
Y+APE + + DV+S GI+L + P D+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 400 SALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG 459
+ + YLH + I H D+KP N+LLD+ +SDFG+A ++ + T+
Sbjct: 116 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 172
Query: 460 YMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDE 496
Y+APE + + DV+S GI+L + P D+
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 400 SALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG 459
+ + YLH + I H D+KP N+LLD+ +SDFG+A ++ + T+
Sbjct: 115 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 460 YMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDE 496
Y+APE + + DV+S GI+L + P D+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 400 SALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG 459
+ + YLH + I H D+KP N+LLD+ +SDFG+A ++ + T+
Sbjct: 116 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 460 YMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDE 496
Y+APE + + DV+S GI+L + P D+
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 400 SALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG 459
+ + YLH + I H D+KP N+LLD+ +SDFG+A ++ + T+
Sbjct: 116 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 460 YMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDE 496
Y+APE + + DV+S GI+L + P D+
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 400 SALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG 459
+ + YLH + I H D+KP N+LLD+ +SDFG+A ++ + T+
Sbjct: 116 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 460 YMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDE 496
Y+APE + + DV+S GI+L + P D+
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
LE +H + I+H DLKP+N L+ D M+ L DFG+A + + S+ + + + YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGAVNYM 223
Query: 462 APEYGREGQVS-TNG----------DVYSFGIMLMETFTRKKPTDEIF 498
PE ++ S NG DV+S G +L K P +I
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 404 YLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
YLH + I H D+KP N+LLD+ +SDFG+A ++ + T+ Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 464 EYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDE 496
E + + DV+S GI+L + P D+
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 404 YLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
YLH + I H D+KP N+LLD+ +SDFG+A ++ + T+ Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 464 EYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDE 496
E + + DV+S GI+L + P D+
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 86/225 (38%), Gaps = 18/225 (8%)
Query: 286 EIFQATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXX 344
E+ AT+ +GRG FG V++ Q G + AVK L+ RA E
Sbjct: 91 EVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAG 141
Query: 345 XXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEY 404
+ + +E + GSL + L L + L + LEY
Sbjct: 142 LTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LVKEQGCLPEDRALYYLGQALEGLEY 200
Query: 405 LHFGYSVPIIHCDLKPSNVLL-DDNMVAHLSDFGMAKPLLKEDQS---LTQTQTLATIGY 460
LH S I+H D+K NVLL D A L DFG A L + LT T +
Sbjct: 201 LH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETH 257
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
MAPE DV+S M++ P + F G + LK
Sbjct: 258 MAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLK 302
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQ 453
+ + L+Y+H S ++H DLKPSN+LL+ + DFG+A+ D + T+
Sbjct: 134 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 190
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511
+AT Y APE + T D++S G +L E + + IF G KH+++ L
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQL 241
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 111/293 (37%), Gaps = 32/293 (10%)
Query: 285 LEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF-----DLQYGRAFKSFDIE 338
L I + T F + ++G G FG+VYK I +G +V + V + +A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 339 CDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
+ + L+ + MP G L + + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
A + YL ++H DL NVL+ ++DFG AK L E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVM 517
+MA E + DV+S+G+ + E T KP D I +++ S++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 234
Query: 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570
E K E C ++ + KC + + R +E++ K+
Sbjct: 235 E---------KGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 278
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 11/126 (8%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQT 452
I + + ALE+LH SV IH D+KPSNVL++ + DFG++ L+ + + +
Sbjct: 113 KIAVSIVKALEHLHSKLSV--IHRDVKPSNVLINALGQVKMCDFGISGYLVDD---VAKD 167
Query: 453 QTLATIGYMA-----PEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHW 507
YMA PE ++G S D++S GI ++E + P D LK
Sbjct: 168 IDAGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 226
Query: 508 VNDLLP 513
V + P
Sbjct: 227 VEEPSP 232
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 404 YLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
YLH + I H D+KP N+LLD+ +SDFG+A ++ + T+ Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 464 EYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDE 496
E + + DV+S GI+L + P D+
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 101
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY P G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+++D ++DFG AK + L T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 246
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQ 453
+ + L+Y+H S ++H DLKPSN+LL+ + DFG+A+ D + T+
Sbjct: 134 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 190
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511
+AT Y APE + T D++S G +L E + + IF G KH+++ L
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQL 241
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQ 453
+ + L+Y+H S ++H DLKPSN+LL+ + DFG+A+ D + T+
Sbjct: 135 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 191
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511
+AT Y APE + T D++S G +L E + + IF G KH+++ L
Sbjct: 192 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQL 242
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQ 453
+ + L+Y+H S ++H DLKPSN+LL+ + DFG+A+ D + T+
Sbjct: 136 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 192
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511
+AT Y APE + T D++S G +L E + + IF G KH+++ L
Sbjct: 193 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQL 243
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQ 453
+ + L+Y+H S ++H DLKPSN+LL+ + DFG+A+ D + T+
Sbjct: 127 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 183
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511
+AT Y APE + T D++S G +L E + + IF G KH+++ L
Sbjct: 184 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQL 234
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 404 YLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
YLH + I H D+KP N+LLD+ +SDFG+A ++ + T+ Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 464 EYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDE 496
E + + DV+S GI+L + P D+
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQ 453
+ + L+Y+H S ++H DLKPSN+LL+ + DFG+A+ D + T+
Sbjct: 134 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 190
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511
+AT Y APE + T D++S G +L E + + IF G KH+++ L
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQL 241
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQ 453
+ + L+Y+H S ++H DLKPSN+LL+ + DFG+A+ D + T+
Sbjct: 128 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 184
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511
+AT Y APE + T D++S G +L E + + IF G KH+++ L
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQL 235
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQ 453
+ + L+Y+H S ++H DLKPSN+LL+ + DFG+A+ D + T+
Sbjct: 134 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 190
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511
+AT Y APE + T D++S G +L E + + IF G KH+++ L
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQL 241
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQ 453
+ + L+Y+H S ++H DLKPSN+LL+ + DFG+A+ D + T+
Sbjct: 128 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 184
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511
+AT Y APE + T D++S G +L E + + IF G KH+++ L
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQL 235
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQ 453
+ + L+Y+H S ++H DLKPSN+LL+ + DFG+A+ D + T+
Sbjct: 130 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 186
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511
+AT Y APE + T D++S G +L E + + IF G KH+++ L
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQL 237
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 86/225 (38%), Gaps = 18/225 (8%)
Query: 286 EIFQATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXX 344
E+ AT+ +GRG FG V++ Q G + AVK L+ RA E
Sbjct: 72 EVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAG 122
Query: 345 XXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEY 404
+ + +E + GSL + L L + L + LEY
Sbjct: 123 LTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LVKEQGCLPEDRALYYLGQALEGLEY 181
Query: 405 LHFGYSVPIIHCDLKPSNVLL-DDNMVAHLSDFGMAKPLLKEDQS---LTQTQTLATIGY 460
LH S I+H D+K NVLL D A L DFG A L + LT T +
Sbjct: 182 LH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETH 238
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
MAPE DV+S M++ P + F G + LK
Sbjct: 239 MAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLK 283
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQ 453
+ + L+Y+H S ++H DLKPSN+LL+ + DFG+A+ D + T+
Sbjct: 150 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 206
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511
+AT Y APE + T D++S G +L E + + IF G KH+++ L
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQL 257
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQ 453
+ + L+Y+H S ++H DLKPSN+LL+ + DFG+A+ D + T+
Sbjct: 132 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 188
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511
+AT Y APE + T D++S G +L E + + IF G KH+++ L
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQL 239
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQ 453
+ + L+Y+H S ++H DLKPSN+LL+ + DFG+A+ D + T+
Sbjct: 130 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 186
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511
+AT Y APE + T D++S G +L E + + IF G KH+++ L
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQL 237
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQ 453
+ + L+Y+H S ++H DLKPSN+LL+ + DFG+A+ D + T+
Sbjct: 130 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 186
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511
+AT Y APE + T D++S G +L E + + IF G KH+++ L
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQL 237
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQ 453
+ + L+Y+H S ++H DLKPSN+LL+ + DFG+A+ D + T+
Sbjct: 132 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 188
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511
+AT Y APE + T D++S G +L E + + IF G KH+++ L
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQL 239
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQ 453
+ + L+Y+H S ++H DLKPSN+LL+ + DFG+A+ D + T+
Sbjct: 150 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 206
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511
+AT Y APE + T D++S G +L E + + IF G KH+++ L
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQL 257
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQ 453
+ + L+Y+H S ++H DLKPSN+LL+ + DFG+A+ D + T+
Sbjct: 138 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 194
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511
+AT Y APE + T D++S G +L E + + IF G KH+++ L
Sbjct: 195 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQL 245
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQ 453
+ + L+Y+H S ++H DLKPSN+LL+ + DFG+A+ D + T+
Sbjct: 130 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 186
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511
+AT Y APE + T D++S G +L E + + IF G KH+++ L
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQL 237
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQ 453
+ + L+Y+H S ++H DLKPSN+LL+ + DFG+A+ D + T+
Sbjct: 130 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTE 186
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511
+AT Y APE + T D++S G +L E + + IF G KH+++ L
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQL 237
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 96/232 (41%), Gaps = 38/232 (16%)
Query: 300 IGRGGFGSVYKA-RIQDGMEVAVK-VFDL-----QYGRAFKSFDIECDMXXXXXXXXXXX 352
+G+G +G V+K+ + G VAVK +FD R F+ I ++
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 353 XXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 412
D LV +YM L + ++ IL+ + ++ + ++YLH G
Sbjct: 77 VLRADNDRDV-YLVFDYM-ETDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSG---G 129
Query: 413 IIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLK-------------------EDQSLTQTQ 453
++H D+KPSN+LL+ ++DFG+++ + +D T
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDEIFFGDMTL 504
+AT Y APE T G D++S G +L E K IF G T+
Sbjct: 190 YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKP----IFPGSSTM 237
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 83/200 (41%), Gaps = 11/200 (5%)
Query: 300 IGRGGFGSVYKAR-IQDGMEVAVKVFDLQY--GRAFKSFDIECDMXXXXXXXXXXXXXXX 356
IG+G F V AR I G EVAVK+ D + + E +
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 357 XXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 416
+ LV+EY G + L + ++ + R + SA++Y H + I+H
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 130
Query: 417 DLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE-YGREGQVSTNG 475
DLK N+LLD +M ++DFG + ++ T + Y APE + +
Sbjct: 131 DLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEV 187
Query: 476 DVYSFGIMLMETFTRKKPTD 495
DV+S G++L + P D
Sbjct: 188 DVWSLGVILYTLVSGSLPFD 207
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 24/207 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
L+ + MP G L + + LN + +A + YL ++H DL NVL
Sbjct: 100 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 156
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ ++DFG+AK L E++ I +MA E + DV+S+G+ +
Sbjct: 157 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 216
Query: 485 METFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
E T KP D I +++ S++E K E C ++
Sbjct: 217 WELMTFGSKPYDGIPASEIS-----------SILE---------KGERLPQPPICTIDVY 256
Query: 544 NLAMKCTVESPEQRINAKEIVTRLLKI 570
+ +KC + + R +E++ K+
Sbjct: 257 MIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 92/225 (40%), Gaps = 52/225 (23%)
Query: 293 GFSEN----NLIGRGGFGSVYKARIQDGM--EVAVKVFDLQYGRAFKSFDI--------- 337
GF EN ++GRG SV + I E AVK+ D+ G +F + ++
Sbjct: 1 GFYENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 59
Query: 338 ECD-MXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSL-----EKCLYSSNYILDIFQR 391
E D + + F LV + M G L EK S I +
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 119
Query: 392 LNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ 451
L ++V AL L+ I+H DLKP N+LLDD+M L+DFG + L D
Sbjct: 120 L---LEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKL 167
Query: 452 TQTLATIGYMAPE------------YGREGQVSTNGDVYSFGIML 484
+ T Y+APE YG+E D++S G+++
Sbjct: 168 REVCGTPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIM 206
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 13/212 (6%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXX 350
F + IG G +G VYKAR + G VA+K L S I E +
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ 470
++H DLKP N+L++ L+DFG+A+ + T + T+ Y APE +
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCK 183
Query: 471 -VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
ST D++S G + E TR+ +F GD
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRA----LFPGD 211
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 24/207 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
L+ + MP G L + + LN + +A + YL ++H DL NVL
Sbjct: 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 149
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ ++DFG+AK L E++ I +MA E + DV+S+G+ +
Sbjct: 150 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 209
Query: 485 METFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIF 543
E T KP D I +++ S++E K E C ++
Sbjct: 210 WELMTFGSKPYDGIPASEIS-----------SILE---------KGERLPQPPICTIDVY 249
Query: 544 NLAMKCTVESPEQRINAKEIVTRLLKI 570
+ +KC + + R +E++ K+
Sbjct: 250 MIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
LV+E G L K L + + ++ V+ ++YL +H +L NVL
Sbjct: 412 LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVL 468
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLT-QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
L + A +SDFG++K L +D T ++ + + APE + S+ DV+S+G+
Sbjct: 469 LVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVT 528
Query: 484 LMETFT 489
+ E +
Sbjct: 529 MWEALS 534
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 13/212 (6%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXX 350
F + IG G +G VYKAR + G VA+K L S I E +
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ 470
++H DLKP N+L++ L+DFG+A+ + T + T+ Y APE +
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCK 182
Query: 471 -VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
ST D++S G + E TR+ +F GD
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRA----LFPGD 210
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 83/206 (40%), Gaps = 22/206 (10%)
Query: 306 GSVYKARIQDGMEVAVKVFDLQ--YGRAFKSFDIECDMXXXXXXXXXXXX--XXXXXXDD 361
G ++K R Q G ++ VKV ++ R + F+ EC
Sbjct: 24 GELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 362 FKALVLEYMPHGSLEKCLYS-SNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKP 420
L+ + P+GSL L+ +N+++D Q + +D A +LH + H L
Sbjct: 83 HPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHA-LNS 141
Query: 421 SNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTN---GDV 477
+V +D++ A +S + S ++APE ++ TN D
Sbjct: 142 RSVXIDEDXTARISXADVK-------FSFQSPGRXYAPAWVAPEALQKKPEDTNRRSADX 194
Query: 478 YSFGIMLMETFTRKKPTDEIFFGDMT 503
+SF ++L E TR E+ F D++
Sbjct: 195 WSFAVLLWELVTR-----EVPFADLS 215
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 13/212 (6%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXX 350
F + IG G +G VYKAR + G VA+K L S I E +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ 470
++H DLKP N+L++ L+DFG+A+ + T + T+ Y APE +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCK 178
Query: 471 -VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
ST D++S G + E TR+ +F GD
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRA----LFPGD 206
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 394 IMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 453
I+ V ++ Y+H I H D+KPSN+L+D N LSDFG ++ ++ D+ + ++
Sbjct: 156 IIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMV--DKKIKGSR 211
Query: 454 TLATIGYMAPEYGREGQVSTNG---DVYSFGIMLMETF 488
T +M PE+ + S NG D++S GI L F
Sbjct: 212 --GTYEFMPPEFF-SNESSYNGAKVDIWSLGICLYVMF 246
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 13/212 (6%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXX 350
F + IG G +G VYKAR + G VA+K L S I E +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ 470
++H DLKP N+L++ L+DFG+A+ + T + T+ Y APE +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCK 178
Query: 471 -VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
ST D++S G + E TR+ +F GD
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRA----LFPGD 206
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 105/266 (39%), Gaps = 26/266 (9%)
Query: 300 IGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXX 358
IG G G V A ++ G VAVK DL+ + + E +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 359 XDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
D +V+E++ G+L + + ++ Q + + V AL LH + +IH D+
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 142
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
K ++LL + LSDFG + KE + + T +MAPE D++
Sbjct: 143 KSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLPYGPEVDIW 200
Query: 479 SFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQC 538
S GIM++E + P +F + P+ M+++ NL +
Sbjct: 201 SLGIMVIEMVDGEPP----YFNEP----------PLKAMKMIRDNLPPRLKNLHKVSPSL 246
Query: 539 VSFIFNLAMKCTVESPEQRINAKEIV 564
F+ L V P QR A E++
Sbjct: 247 KGFLDRL----LVRDPAQRATAAELL 268
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 13/212 (6%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXX 350
F + IG G +G VYKAR + G VA+K L S I E +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ 470
++H DLKP N+L++ L+DFG+A+ + T + T+ Y APE +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCK 179
Query: 471 -VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
ST D++S G + E TR+ +F GD
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA----LFPGD 207
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 13/212 (6%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXX 350
F + IG G +G VYKAR + G VA+K L S I E +
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ 470
++H DLKP N+L++ L+DFG+A+ + T + T+ Y APE +
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCK 182
Query: 471 -VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
ST D++S G + E TR+ +F GD
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRR----ALFPGD 210
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 13/212 (6%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXX 350
F + IG G +G VYKAR + G VA+K L S I E +
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ 470
++H DLKP N+L++ L+DFG+A+ + T + T+ Y APE +
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCK 181
Query: 471 -VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
ST D++S G + E TR+ +F GD
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRR----ALFPGD 209
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 13/212 (6%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXX 350
F + IG G +G VYKAR + G VA+K L S I E +
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ 470
++H DLKP N+L++ L+DFG+A+ + T + T+ Y APE +
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCK 181
Query: 471 -VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
ST D++S G + E TR+ +F GD
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRA----LFPGD 209
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
Query: 46 DSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP-STLWNLKDILYLDLSSNFL----- 99
D +K+ + + F + T+L L L N++ I + W L +L L+LS NFL
Sbjct: 281 DLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDS 340
Query: 100 -LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGD 151
+ NL L +DLS N+ + + GL +L+ L L+ N+L+ S+PD I D
Sbjct: 341 RMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLK-SVPDGIFD 392
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 82/206 (39%), Gaps = 23/206 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
+++E G L L + LD+ + +++AL YL S +H D+ NVL
Sbjct: 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 523
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ N L DFG+++ +++ ++ I +MAPE + ++ DV+ FG+ +
Sbjct: 524 VSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 582
Query: 485 METFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFN 544
E L H V P ++ D + E C +++
Sbjct: 583 WE----------------ILMHGVK---PFQGVKNNDVIGRIENGERLPMPPNCPPTLYS 623
Query: 545 LAMKCTVESPEQRINAKEIVTRLLKI 570
L KC P +R E+ +L I
Sbjct: 624 LMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 13/212 (6%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXX 350
F + IG G +G VYKAR + G VA+K L S I E +
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ 470
++H DLKP N+L++ L+DFG+A+ + T + T+ Y APE +
Sbjct: 124 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCK 181
Query: 471 -VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
ST D++S G + E TR+ +F GD
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRA----LFPGD 209
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 13/212 (6%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXX 350
F + IG G +G VYKAR + G VA+K L S I E +
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ 470
++H DLKP N+L++ L+DFG+A+ + T + T+ Y APE +
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCK 180
Query: 471 -VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
ST D++S G + E TR+ +F GD
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRA----LFPGD 208
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 13/212 (6%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXX 350
F + IG G +G VYKAR + G VA+K L S I E +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ 470
++H DLKP N+L++ L+DFG+A+ + T + T+ Y APE +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCK 179
Query: 471 -VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
ST D++S G + E TR+ +F GD
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA----LFPGD 207
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQ 453
+ + L+Y+H S ++H DLKPSN+LL+ + DFG+A+ D + T+
Sbjct: 132 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTE 188
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511
+AT Y APE + T D++S G +L E + + IF G KH+++ L
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQL 239
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 13/212 (6%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXX 350
F + IG G +G VYKAR + G VA+K L S I E +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ 470
++H DLKP N+L++ L+DFG+A+ + T + T+ Y APE +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCK 179
Query: 471 -VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
ST D++S G + E TR+ +F GD
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA----LFPGD 207
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 13/212 (6%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXX 350
F + IG G +G VYKAR + G VA+K L S I E +
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ 470
++H DLKP N+L++ L+DFG+A+ + T + T+ Y APE +
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCK 180
Query: 471 -VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
ST D++S G + E TR+ +F GD
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRA----LFPGD 208
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 13/212 (6%)
Query: 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXX 350
F + IG G +G VYKAR + G VA+K L S I E +
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 351 XXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ 470
++H DLKP N+L++ L+DFG+A+ + T + T+ Y APE +
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPEILLGCK 180
Query: 471 -VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
ST D++S G + E TR+ +F GD
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRA----LFPGD 208
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 105/266 (39%), Gaps = 26/266 (9%)
Query: 300 IGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXX 358
IG G G V A ++ G VAVK DL+ + + E +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 359 XDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
D +V+E++ G+L + + ++ Q + + V AL LH + +IH D+
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 151
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
K ++LL + LSDFG + KE + + T +MAPE D++
Sbjct: 152 KSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLPYGPEVDIW 209
Query: 479 SFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQC 538
S GIM++E + P +F + P+ M+++ NL +
Sbjct: 210 SLGIMVIEMVDGEPP----YFNEP----------PLKAMKMIRDNLPPRLKNLHKVSPSL 255
Query: 539 VSFIFNLAMKCTVESPEQRINAKEIV 564
F+ L V P QR A E++
Sbjct: 256 KGFLDRL----LVRDPAQRATAAELL 277
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 85/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 30 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 87
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+ G + L + R + EYLH
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 145
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D+ ++DFG AK + L T Y+APE
Sbjct: 146 --SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 198
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 199 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 232
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 105/266 (39%), Gaps = 26/266 (9%)
Query: 300 IGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXX 358
IG G G V A ++ G VAVK DL+ + + E +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 359 XDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
D +V+E++ G+L + + ++ Q + + V AL LH + +IH D+
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 146
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
K ++LL + LSDFG + KE + + T +MAPE D++
Sbjct: 147 KSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLPYGPEVDIW 204
Query: 479 SFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQC 538
S GIM++E + P +F + P+ M+++ NL +
Sbjct: 205 SLGIMVIEMVDGEPP----YFNEP----------PLKAMKMIRDNLPPRLKNLHKVSPSL 250
Query: 539 VSFIFNLAMKCTVESPEQRINAKEIV 564
F+ L V P QR A E++
Sbjct: 251 KGFLDRL----LVRDPAQRATAAELL 272
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 99/243 (40%), Gaps = 36/243 (14%)
Query: 267 LPNDANMPRISNQRRFTYLE-----IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVA 320
+P ++M +S +R Y + I++ + + +G G +GSV A + G+ VA
Sbjct: 15 VPRGSHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA 74
Query: 321 VKVFD------LQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHG 373
VK + R ++ + M ++F + L ++
Sbjct: 75 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA 134
Query: 374 SLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHL 433
L + D Q L + + L+Y+H S IIH DLKPSN+ ++++ +
Sbjct: 135 DLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 189
Query: 434 SDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG-------DVYSFGIMLME 486
DFG+A+ D +T GY+A + R ++ N D++S G ++ E
Sbjct: 190 LDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 238
Query: 487 TFT 489
T
Sbjct: 239 LLT 241
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 105/266 (39%), Gaps = 26/266 (9%)
Query: 300 IGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXX 358
IG G G V A ++ G VAVK DL+ + + E +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 359 XDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
D +V+E++ G+L + + ++ Q + + V AL LH + +IH D+
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 153
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
K ++LL + LSDFG + KE + + T +MAPE D++
Sbjct: 154 KSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLPYGPEVDIW 211
Query: 479 SFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQC 538
S GIM++E + P +F + P+ M+++ NL +
Sbjct: 212 SLGIMVIEMVDGEPP----YFNEP----------PLKAMKMIRDNLPPRLKNLHKVSPSL 257
Query: 539 VSFIFNLAMKCTVESPEQRINAKEIV 564
F+ L V P QR A E++
Sbjct: 258 KGFLDRL----LVRDPAQRATAAELL 279
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
L+ L F +S ++H DLKP N+L++ L+DFG+A+ + T + T+ Y
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYR 171
Query: 462 APEYGREGQ-VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
APE + ST D++S G + E TR+ +F GD
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGD 208
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
L+ L F +S ++H DLKP N+L++ L+DFG+A+ + T + T+ Y
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYR 172
Query: 462 APEYGREGQ-VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
APE + ST D++S G + E TR+ +F GD
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGD 209
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
L+ L F +S ++H DLKP N+L++ L+DFG+A+ + T + T+ Y
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYR 173
Query: 462 APEYGREGQ-VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
APE + ST D++S G + E TR+ +F GD
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGD 210
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
L+ L F +S ++H DLKP N+L++ L+DFG+A+ + T + T+ Y
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYR 170
Query: 462 APEYGREGQ-VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
APE + ST D++S G + E TR+ +F GD
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGD 207
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMAKPLLKEDQSL 449
IM + A++YLH S+ I H D+KP N+L N + L+DFG AK +
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 172
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ T+ T Y+APE + + D++S G+++
Sbjct: 173 SLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 207
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
L+ L F +S ++H DLKP N+L++ L+DFG+A+ + T + T+ Y
Sbjct: 116 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYR 173
Query: 462 APEYGREGQ-VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
APE + ST D++S G + E TR+ +F GD
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGD 210
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 38 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 95
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+ G + L + R + EYLH
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 153
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 154 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 206
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 240
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
L+ L F +S ++H DLKP N+L++ L+DFG+A+ + T + T+ Y
Sbjct: 113 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYR 170
Query: 462 APEYGREGQ-VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
APE + ST D++S G + E TR+ +F GD
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGD 207
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
L+ L F +S ++H DLKP N+L++ L+DFG+A+ + T + T+ Y
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYR 173
Query: 462 APEYGREGQ-VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
APE + ST D++S G + E TR+ +F GD
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGD 210
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%)
Query: 414 IHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVST 473
IH DL N+LL + + DFG+A+ + + + + + +MAPE +
Sbjct: 185 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 244
Query: 474 NGDVYSFGIMLMETFT 489
DV+S+GI L E F+
Sbjct: 245 ESDVWSYGIFLWELFS 260
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%)
Query: 414 IHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVST 473
IH DL N+LL + + DFG+A+ + + + + + +MAPE +
Sbjct: 183 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 242
Query: 474 NGDVYSFGIMLMETFT 489
DV+S+GI L E F+
Sbjct: 243 ESDVWSYGIFLWELFS 258
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 16/132 (12%)
Query: 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD 427
EY + +L ++S N + + + AL Y+H S IIH +LKP N+ +D+
Sbjct: 95 EYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRNLKPXNIFIDE 151
Query: 428 NMVAHLSDFGMAK------PLLKED------QSLTQTQTLATIGYMAPEY-GREGQVSTN 474
+ + DFG+AK +LK D S T + T Y+A E G +
Sbjct: 152 SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEK 211
Query: 475 GDVYSFGIMLME 486
D YS GI+ E
Sbjct: 212 IDXYSLGIIFFE 223
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%)
Query: 414 IHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVST 473
IH DL N+LL + + DFG+A+ + + + + + +MAPE +
Sbjct: 167 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 226
Query: 474 NGDVYSFGIMLMETFT 489
DV+S+GI L E F+
Sbjct: 227 ESDVWSYGIFLWELFS 242
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
L+ L F +S ++H DLKP N+L++ L+DFG+A+ + T + T+ Y
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYR 173
Query: 462 APEYGREGQ-VSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
APE + ST D++S G + E TR+ +F GD
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGD 210
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 121
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+ G + L + R + EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 179
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 232
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 266
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%)
Query: 414 IHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVST 473
IH DL N+LL + + DFG+A+ + + + + + +MAPE +
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 249
Query: 474 NGDVYSFGIMLMETFT 489
DV+S+GI L E F+
Sbjct: 250 ESDVWSYGIFLWELFS 265
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 105/266 (39%), Gaps = 26/266 (9%)
Query: 300 IGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXX 358
IG G G V A ++ G VAVK DL+ + + E +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 359 XDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
D +V+E++ G+L + + ++ Q + + V AL LH + +IH D+
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 196
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
K ++LL + LSDFG + KE + + T +MAPE D++
Sbjct: 197 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIW 254
Query: 479 SFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQC 538
S GIM++E + P +F + P+ M+++ NL +
Sbjct: 255 SLGIMVIEMVDGEPP----YFNEP----------PLKAMKMIRDNLPPRLKNLHKVSPSL 300
Query: 539 VSFIFNLAMKCTVESPEQRINAKEIV 564
F+ L V P QR A E++
Sbjct: 301 KGFLDRL----LVRDPAQRATAAELL 322
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%)
Query: 414 IHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVST 473
IH DL N+LL + + DFG+A+ + + + + + +MAPE +
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 249
Query: 474 NGDVYSFGIMLMETFT 489
DV+S+GI L E F+
Sbjct: 250 ESDVWSYGIFLWELFS 265
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 85/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 121
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+ G + L + R + EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 179
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + +L T Y+APE
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLC-----GTPEYLAPEIIL 232
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 266
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 10/134 (7%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
+V+EY+ G L + + ++ R + + SA++Y H ++H DLKP NVL
Sbjct: 88 MVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHM---VVHRDLKPENVL 143
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY--GREGQVSTNGDVYSFGI 482
LD +M A ++DFG++ ++ + + L + + Y APE GR D++S G+
Sbjct: 144 LDAHMNAKIADFGLSN-MMSDGEFL--RDSCGSPNYAAPEVISGRL-YAGPEVDIWSCGV 199
Query: 483 MLMETFTRKKPTDE 496
+L P D+
Sbjct: 200 ILYALLCGTLPFDD 213
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 394 IMIDVASALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLLKEDQSLT 450
IM + SA+ ++H V ++H DLKP N+L +DN+ + DFG A+ ++Q L
Sbjct: 111 IMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL- 166
Query: 451 QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
T+ Y APE + + D++S G++L + + P
Sbjct: 167 -KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 34/177 (19%)
Query: 413 IIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED---------QSLTQTQTLATIGYMAP 463
+IH DLKPSN+L++ N + DFG+A+ ++ E Q + +AT Y AP
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLAR-IIDESAADNSEPTGQQSGMVEFVATRWYRAP 191
Query: 464 EYG-REGQVSTNGDVYSFGIMLMETFTRKK--PTDE------IFFGDMTLKHWVNDLLPI 514
E + S DV+S G +L E F R+ P + + FG + H NDL I
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCI 251
Query: 515 S---------VMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKE 562
+ + A L + KG +L + V P +RI AKE
Sbjct: 252 ESPRAREYIKSLPMYPAAPLEKMFPRVNPKG------IDLLQRMLVFDPAKRITAKE 302
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 291 TNGFSEN----NLIGRGGFGSVYKA-RIQDGMEVAVKVFDLQY--GRAFKSFDIECDMXX 343
+ FS+N +G+G F V + G+E A K+ + + R F+ + E +
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 344 XXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALE 403
+ F LV + + G L + + + + + + + LE
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILE 116
Query: 404 YLHFGYSVPIIHCDLKPSNVLLDDN---MVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+ + +S I+H +LKP N+LL L+DFG+A ++ + S T GY
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPGY 173
Query: 461 MAPEYGREGQVSTNGDVYSFGIML 484
++PE ++ S D+++ G++L
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 44 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 101
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+ G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 246
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 82/200 (41%), Gaps = 11/200 (5%)
Query: 300 IGRGGFGSVYKAR-IQDGMEVAVKVFDLQY--GRAFKSFDIECDMXXXXXXXXXXXXXXX 356
IG+G F V AR + G EVAVK+ D + + E +
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 357 XXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 416
+ LV+EY G + L + + + R + SA++Y H Y I+H
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKY---IVHR 138
Query: 417 DLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE-YGREGQVSTNG 475
DLK N+LLD +M ++DFG + ++ T + Y APE + +
Sbjct: 139 DLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGSPPYAAPELFQGKKYDGPEV 195
Query: 476 DVYSFGIMLMETFTRKKPTD 495
DV+S G++L + P D
Sbjct: 196 DVWSLGVILYTLVSGSLPFD 215
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 13/119 (10%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQ 453
+ + L+Y+H S ++H DLKPSN+LL+ + DFG+A+ D + +
Sbjct: 134 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXE 190
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511
+AT Y APE + T D++S G +L E + + IF G KH+++ L
Sbjct: 191 XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQL 241
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 291 TNGFSEN----NLIGRGGFGSVYKA-RIQDGMEVAVKVFDLQY--GRAFKSFDIECDMXX 343
+ FS+N +G+G F V + G+E A K+ + + R F+ + E +
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 344 XXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALE 403
+ F LV + + G L + + + + + + + LE
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILE 116
Query: 404 YLHFGYSVPIIHCDLKPSNVLLDDN---MVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+ + +S I+H +LKP N+LL L+DFG+A ++ + S T GY
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPGY 173
Query: 461 MAPEYGREGQVSTNGDVYSFGIML 484
++PE ++ S D+++ G++L
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 13/119 (10%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQ 453
+ + L+Y+H S ++H DLKPSN+LL+ + DFG+A+ D + +
Sbjct: 135 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXE 191
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511
+AT Y APE + T D++S G +L E + + IF G KH+++ L
Sbjct: 192 XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQL 242
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 85/200 (42%), Gaps = 13/200 (6%)
Query: 291 TNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFDLQY--GRAFKSFDIECDMXXXXXX 347
++ + +G+G F V + G+E A K+ + + R F+ + E +
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 348 XXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
+ F LV + + G L + + + + + + + LE + +
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILESIAY 119
Query: 408 GYSVPIIHCDLKPSNVLLDDN---MVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE 464
+S I+H +LKP N+LL L+DFG+A ++ + S T GY++PE
Sbjct: 120 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSPE 176
Query: 465 YGREGQVSTNGDVYSFGIML 484
++ S D+++ G++L
Sbjct: 177 VLKKDPYSKPVDIWACGVIL 196
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMAKPLLKEDQSL 449
IM + A++YLH S+ I H D+KP N+L N + L+DFG AK +
Sbjct: 125 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 178
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ T T Y+APE + + D++S G+++
Sbjct: 179 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 213
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMAKPLLKEDQSL 449
IM + A++YLH S+ I H D+KP N+L N + L+DFG AK +
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 174
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ T T Y+APE + + D++S G+++
Sbjct: 175 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 209
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMAKPLLKEDQSL 449
IM + A++YLH S+ I H D+KP N+L N + L+DFG AK +
Sbjct: 127 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 180
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ T T Y+APE + + D++S G+++
Sbjct: 181 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 215
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMAKPLLKEDQSL 449
IM + A++YLH S+ I H D+KP N+L N + L+DFG AK +
Sbjct: 165 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 218
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ T T Y+APE + + D++S G+++
Sbjct: 219 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 253
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMAKPLLKEDQSL 449
IM + A++YLH S+ I H D+KP N+L N + L+DFG AK +
Sbjct: 126 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 179
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ T T Y+APE + + D++S G+++
Sbjct: 180 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 214
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMAKPLLKEDQSL 449
IM + A++YLH S+ I H D+KP N+L N + L+DFG AK +
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 174
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ T T Y+APE + + D++S G+++
Sbjct: 175 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 209
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMAKPLLKEDQSL 449
IM + A++YLH S+ I H D+KP N+L N + L+DFG AK +
Sbjct: 120 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 173
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ T T Y+APE + + D++S G+++
Sbjct: 174 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 208
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMAKPLLKEDQSL 449
IM + A++YLH S+ I H D+KP N+L N + L+DFG AK +
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 172
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ T T Y+APE + + D++S G+++
Sbjct: 173 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 207
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 105/266 (39%), Gaps = 26/266 (9%)
Query: 300 IGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXX 358
IG G G V A ++ G VAVK DL+ + + E +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 359 XDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
D +V+E++ G+L + + ++ Q + + V AL LH + +IH D+
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 273
Query: 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVY 478
K ++LL + LSDFG + KE + + T +MAPE D++
Sbjct: 274 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIW 331
Query: 479 SFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQC 538
S GIM++E + P +F + LK M+++ NL +
Sbjct: 332 SLGIMVIEMVDGEPP----YFNEPPLK----------AMKMIRDNLPPRLKNLHKVSPSL 377
Query: 539 VSFIFNLAMKCTVESPEQRINAKEIV 564
F+ L V P QR A E++
Sbjct: 378 KGFLDRL----LVRDPAQRATAAELL 399
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMAKPLLKEDQSL 449
IM + A++YLH S+ I H D+KP N+L N + L+DFG AK +
Sbjct: 171 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 224
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ T T Y+APE + + D++S G+++
Sbjct: 225 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 259
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMAKPLLKEDQSL 449
IM + A++YLH S+ I H D+KP N+L N + L+DFG AK +
Sbjct: 135 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 188
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ T T Y+APE + + D++S G+++
Sbjct: 189 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 223
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 394 IMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM----VAHLSDFGMAKPLLKEDQSL 449
++ + +EYLH + ++H DLKPSN+L D + DFG AK L E+ L
Sbjct: 121 VLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL 177
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
T ++APE D++S G++L T P
Sbjct: 178 --XTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 40 AALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTS--IPSTLWNLKD--ILYLDLS 95
++L +LD N L F P CF + L L L + +L W L + I L L+
Sbjct: 171 SSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQLNPHLTEKLCWELSNTSIQNLSLA 230
Query: 96 SNFLL------IGNLKV--LVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPD 147
+N LL LK L Q+DLS NN DV + L L+YL LEYN +Q P
Sbjct: 231 NNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPR 290
Query: 148 SI 149
S
Sbjct: 291 SF 292
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Query: 18 LQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLT 77
+ +L+L NQL P + R + L LD+G N + P L L+ L L N+L+
Sbjct: 27 ITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNELS 86
Query: 78 SIP-STLWNLKDILYLDLSSNFLL------IGNLKVLVQVDLSMNNFSDV 120
I T ++ LDL SN + N K L+++DLS N S
Sbjct: 87 QISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSST 136
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 53/137 (38%), Gaps = 18/137 (13%)
Query: 18 LQLLSLEDNQLEGSIPDDLC--RLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNK 75
+Q LSL +NQL + + L +LD N L F L +LR L L N
Sbjct: 224 IQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNN 283
Query: 76 LTSI-PSTLWNLKDILYLDLSSNF---------------LLIGNLKVLVQVDLSMNNFSD 119
+ + P + + L ++ YL L F LK L +++ NN
Sbjct: 284 IQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPS 343
Query: 120 VIPTTIGGLKDLQYLFL 136
T GL L+YL L
Sbjct: 344 TKSNTFTGLVSLKYLSL 360
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 82/214 (38%), Gaps = 21/214 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
+ D ++ G+++ E P FF D
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFAD 241
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 82/200 (41%), Gaps = 12/200 (6%)
Query: 290 ATNGF---SENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXX 345
A N F S+ ++G G FG V+K G+++A K+ + + + E +
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 346 XXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
+ LV+EY+ G L + +Y L + M + + ++
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHM 203
Query: 406 HFGYSVPIIHCDLKPSNVLL--DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
H Y I+H DLKP N+L D + DFG+A+ ++ T ++AP
Sbjct: 204 HQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV---NFGTPEFLAP 257
Query: 464 EYGREGQVSTNGDVYSFGIM 483
E VS D++S G++
Sbjct: 258 EVVNYDFVSFPTDMWSVGVI 277
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 82/200 (41%), Gaps = 11/200 (5%)
Query: 300 IGRGGFGSVYKAR-IQDGMEVAVKVFDLQY--GRAFKSFDIECDMXXXXXXXXXXXXXXX 356
IG+G F V AR I G EVAVK+ D + + E +
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 357 XXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 416
+ LV+EY G + L + + + R + SA++Y H + I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 417 DLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE-YGREGQVSTNG 475
DLK N+LLD +M ++DFG + ++ T + Y APE + +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEV 194
Query: 476 DVYSFGIMLMETFTRKKPTD 495
DV+S G++L + P D
Sbjct: 195 DVWSLGVILYTLVSGSLPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 82/200 (41%), Gaps = 11/200 (5%)
Query: 300 IGRGGFGSVYKAR-IQDGMEVAVKVFDLQY--GRAFKSFDIECDMXXXXXXXXXXXXXXX 356
IG+G F V AR I G EVAVK+ D + + E +
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 357 XXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 416
+ LV+EY G + L + + + R + SA++Y H + I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 417 DLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE-YGREGQVSTNG 475
DLK N+LLD +M ++DFG + ++ T + Y APE + +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEV 194
Query: 476 DVYSFGIMLMETFTRKKPTD 495
DV+S G++L + P D
Sbjct: 195 DVWSLGVILYTLVSGSLPFD 214
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 77/204 (37%), Gaps = 10/204 (4%)
Query: 294 FSENNLIGRGGFGSVYKARIQDGMEV-AVKVFD---LQYGRAFKSFDIECDMXXXXXXXX 349
+ +G+GGF Y+ D EV A KV L + E +
Sbjct: 28 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 87
Query: 350 XXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 409
DDF +VLE SL + + + R M ++YLH
Sbjct: 88 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLHNNR 146
Query: 410 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG 469
+IH DLK N+ L+D+M + DFG+A + E + T Y+APE +
Sbjct: 147 ---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCGTPNYIAPEVLCKK 201
Query: 470 QVSTNGDVYSFGIMLMETFTRKKP 493
S D++S G +L K P
Sbjct: 202 GHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 82/212 (38%), Gaps = 16/212 (7%)
Query: 288 FQATNGFSENNLIGRGGFGSVYKARIQDG--MEVAVKVFDLQYGRAFKSFDIECDMXXXX 345
Q T+G+ IG G + SV K I ME AVK+ D + +I +
Sbjct: 18 IQFTDGYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEI---LLRYG 73
Query: 346 XXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 405
+ +V E M G L + + + + ++ + +EYL
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSE-REASAVLFTITKTVEYL 132
Query: 406 HFGYSVPIIHCDLKPSNVLLDDNM----VAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
H + ++H DLKPSN+L D + DFG AK L E+ L T ++
Sbjct: 133 H---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL--MTPCYTANFV 187
Query: 462 APEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
APE D++S G++L T P
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMAKPLLKEDQSL 449
+M + +AL Y H S ++H DLKP N+L D + + DFG+A+ L K D+
Sbjct: 128 ELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE-LFKSDEH- 182
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
T T YMAPE + V+ D++S G+++
Sbjct: 183 -STNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVM 215
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 394 IMIDVASALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLLKEDQSLT 450
++ V SA++YLH I+H DLKP N+L ++N ++DFG++K +Q+
Sbjct: 111 VIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGI 163
Query: 451 QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
+ T GY+APE + S D +S G++
Sbjct: 164 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 196
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
+++E G L L + LD+ + +++AL YL S +H D+ NVL
Sbjct: 87 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 143
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ L DFG+++ +++ ++ I +MAPE + ++ DV+ FG+ +
Sbjct: 144 VSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 202
Query: 485 METFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFN 544
E L H V P ++ D + E C +++
Sbjct: 203 WE----------------ILMHGVK---PFQGVKNNDVIGRIENGERLPMPPNCPPTLYS 243
Query: 545 LAMKCTVESPEQRINAKEIVTRLLKI 570
L KC P +R E+ +L I
Sbjct: 244 LMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 87/225 (38%), Gaps = 14/225 (6%)
Query: 286 EIFQATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXX 344
E + + + +GRG FG V++ + Q G + AVK L+ R + + C
Sbjct: 52 EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEEL--VAC---AG 106
Query: 345 XXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEY 404
+ + +E + GSL + L L + L + LEY
Sbjct: 107 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYYLGQALEGLEY 165
Query: 405 LHFGYSVPIIHCDLKPSNVLL-DDNMVAHLSDFGMA---KPLLKEDQSLTQTQTLATIGY 460
LH + I+H D+K NVLL D A L DFG A +P LT T +
Sbjct: 166 LH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH 222
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
MAPE D++S M++ P + F G + LK
Sbjct: 223 MAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 267
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
+V+EY+ G L + N LD + + + S ++Y H ++H DLKP NVL
Sbjct: 93 MVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVL 148
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEY--GREGQVSTNGDVYSFGI 482
LD +M A ++DFG++ ++ + + L + + Y APE GR D++S G+
Sbjct: 149 LDAHMNAKIADFGLSN-MMSDGEFL--RXSCGSPNYAAPEVISGR-LYAGPEVDIWSSGV 204
Query: 483 MLMETFTRKKPTDE 496
+L P D+
Sbjct: 205 ILYALLCGTLPFDD 218
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 394 IMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM----VAHLSDFGMAKPLLKEDQSL 449
++ + +EYLH S ++H DLKPSN+L D + DFG AK L E+ L
Sbjct: 126 VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL 182
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
T ++APE + D++S GI+L
Sbjct: 183 --MTPCYTANFVAPEVLKRQGYDEGCDIWSLGILL 215
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 394 IMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM----VAHLSDFGMAKPLLKEDQSL 449
++ + +EYLH S ++H DLKPSN+L D + DFG AK L E+ L
Sbjct: 126 VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL 182
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
T ++APE + D++S GI+L
Sbjct: 183 --MTPCYTANFVAPEVLKRQGYDEGCDIWSLGILL 215
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 77/204 (37%), Gaps = 10/204 (4%)
Query: 294 FSENNLIGRGGFGSVYKARIQDGMEV-AVKVFD---LQYGRAFKSFDIECDMXXXXXXXX 349
+ +G+GGF Y+ D EV A KV L + E +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 350 XXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 409
DDF +VLE SL + + + R M ++YLH
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLHNNR 162
Query: 410 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG 469
+IH DLK N+ L+D+M + DFG+A + E + T Y+APE +
Sbjct: 163 ---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCGTPNYIAPEVLCKK 217
Query: 470 QVSTNGDVYSFGIMLMETFTRKKP 493
S D++S G +L K P
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 87/225 (38%), Gaps = 14/225 (6%)
Query: 286 EIFQATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXX 344
E + + + +GRG FG V++ + Q G + AVK L+ R + + C
Sbjct: 68 EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEEL--VAC---AG 122
Query: 345 XXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEY 404
+ + +E + GSL + L L + L + LEY
Sbjct: 123 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYYLGQALEGLEY 181
Query: 405 LHFGYSVPIIHCDLKPSNVLL-DDNMVAHLSDFGMA---KPLLKEDQSLTQTQTLATIGY 460
LH + I+H D+K NVLL D A L DFG A +P LT T +
Sbjct: 182 LH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH 238
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
MAPE D++S M++ P + F G + LK
Sbjct: 239 MAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 283
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+++D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIII 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 19/212 (8%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 141
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 142 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATR 193
Query: 459 GYMAPEYGREG-QVSTNGDVYSFGIMLMETFT 489
Y APE + D++S G ++ E T
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ + P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYQMAAGYPP----FFADQPIQ 245
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 19/212 (8%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 141
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 142 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATR 193
Query: 459 GYMAPEYGREG-QVSTNGDVYSFGIMLMETFT 489
Y APE + D++S G ++ E T
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 77/204 (37%), Gaps = 10/204 (4%)
Query: 294 FSENNLIGRGGFGSVYKARIQDGMEV-AVKVFD---LQYGRAFKSFDIECDMXXXXXXXX 349
+ +G+GGF Y+ D EV A KV L + E +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 350 XXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 409
DDF +VLE SL + + + R M ++YLH
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLHNNR 162
Query: 410 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG 469
+IH DLK N+ L+D+M + DFG+A + E + T Y+APE +
Sbjct: 163 ---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKTLCGTPNYIAPEVLCKK 217
Query: 470 QVSTNGDVYSFGIMLMETFTRKKP 493
S D++S G +L K P
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 9/114 (7%)
Query: 385 ILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLK 444
+LD I+ +V LEYLH IH D+K N+LL ++ ++DFG++ L
Sbjct: 112 VLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVS-AFLA 167
Query: 445 EDQSLTQTQT----LATIGYMAPEYGREGQ-VSTNGDVYSFGIMLMETFTRKKP 493
+T+ + + T +MAPE + + D++SFGI +E T P
Sbjct: 168 TGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 77/204 (37%), Gaps = 10/204 (4%)
Query: 294 FSENNLIGRGGFGSVYKARIQDGMEV-AVKVFD---LQYGRAFKSFDIECDMXXXXXXXX 349
+ +G+GGF Y+ D EV A KV L + E +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 350 XXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 409
DDF +VLE SL + + + R M ++YLH
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLHNNR 162
Query: 410 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG 469
+IH DLK N+ L+D+M + DFG+A + E + T Y+APE +
Sbjct: 163 ---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKXLCGTPNYIAPEVLCKK 217
Query: 470 QVSTNGDVYSFGIMLMETFTRKKP 493
S D++S G +L K P
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 19/212 (8%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 141
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 142 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATR 193
Query: 459 GYMAPEYGREG-QVSTNGDVYSFGIMLMETFT 489
Y APE + D++S G ++ E T
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 9/114 (7%)
Query: 385 ILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLK 444
+LD I+ +V LEYLH IH D+K N+LL ++ ++DFG++ L
Sbjct: 117 VLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVS-AFLA 172
Query: 445 EDQSLTQTQT----LATIGYMAPEYGREGQ-VSTNGDVYSFGIMLMETFTRKKP 493
+T+ + + T +MAPE + + D++SFGI +E T P
Sbjct: 173 TGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + IG G +GSV A + G+ VAVK + R ++ +
Sbjct: 22 IWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 139
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 140 LRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMT-------- 185
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 82/200 (41%), Gaps = 11/200 (5%)
Query: 300 IGRGGFGSVYKAR-IQDGMEVAVKVFDLQY--GRAFKSFDIECDMXXXXXXXXXXXXXXX 356
IG+G F V AR I G EVAV++ D + + E +
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 357 XXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 416
+ LV+EY G + L + + + R + SA++Y H + I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 417 DLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE-YGREGQVSTNG 475
DLK N+LLD +M ++DFG + ++ T + Y APE + +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEV 194
Query: 476 DVYSFGIMLMETFTRKKPTD 495
DV+S G++L + P D
Sbjct: 195 DVWSLGVILYTLVSGSLPFD 214
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 15/204 (7%)
Query: 299 LIGRGGFGSVYKARIQDGMEV-AVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXX 357
++G+G FG V A + E+ A+K+ L+ + D+EC M
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKI--LKKDVVIQDDDVECTMVEKRVLALLDKPPFLT 83
Query: 358 XXD------DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 411
D V+EY+ G L +Y + F+ + A L F +
Sbjct: 84 QLHSCFQTVDRLYFVMEYVNGGDL---MYHIQQV-GKFKEPQAVFYAAEISIGLFFLHKR 139
Query: 412 PIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQV 471
II+ DLK NV+LD ++DFGM K + + +T + T Y+APE
Sbjct: 140 GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD--GVTTREFCGTPDYIAPEIIAYQPY 197
Query: 472 STNGDVYSFGIMLMETFTRKKPTD 495
+ D +++G++L E + P D
Sbjct: 198 GKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 20/128 (15%)
Query: 364 ALVLEYMPHGSL-----EKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
+LVLE + G L EK YS D ++ + A+ YLH I+H DL
Sbjct: 124 SLVLELVTGGELFDRIVEKGYYSERDAADAVKQ------ILEAVAYLH---ENGIVHRDL 174
Query: 419 KPSNVLLDD---NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG 475
KP N+L + ++DFG++K + E Q L +T T GY APE R
Sbjct: 175 KPENLLYATPAPDAPLKIADFGLSK--IVEHQVLMKT-VCGTPGYCAPEILRGCAYGPEV 231
Query: 476 DVYSFGIM 483
D++S GI+
Sbjct: 232 DMWSVGII 239
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 87/225 (38%), Gaps = 14/225 (6%)
Query: 286 EIFQATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFDLQYGRAFKSFDIECDMXXX 344
E + + + +GRG FG V++ + Q G + AVK L+ R + + C
Sbjct: 66 EYREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEEL--VAC---AG 120
Query: 345 XXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEY 404
+ + +E + GSL + L L + L + LEY
Sbjct: 121 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYYLGQALEGLEY 179
Query: 405 LHFGYSVPIIHCDLKPSNVLL-DDNMVAHLSDFGMA---KPLLKEDQSLTQTQTLATIGY 460
LH + I+H D+K NVLL D A L DFG A +P LT T +
Sbjct: 180 LH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH 236
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
MAPE D++S M++ P + F G + LK
Sbjct: 237 MAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 281
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
+++E G L L + LD+ + +++AL YL S +H D+ NVL
Sbjct: 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 523
Query: 425 LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ L DFG+++ +++ ++ I +MAPE + ++ DV+ FG+ +
Sbjct: 524 VSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 582
Query: 485 METFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFN 544
E L H V P ++ D + E C +++
Sbjct: 583 WE----------------ILMHGVK---PFQGVKNNDVIGRIENGERLPMPPNCPPTLYS 623
Query: 545 LAMKCTVESPEQRINAKEIVTRLLKI 570
L KC P +R E+ +L I
Sbjct: 624 LMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 97/239 (40%), Gaps = 36/239 (15%)
Query: 271 ANMPRISNQRRFTYLE-----IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF 324
++M +S +R Y + I++ + + +G G +GSV A + G+ VAVK
Sbjct: 1 SHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL 60
Query: 325 D------LQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEK 377
+ R ++ + M ++F + L ++ L
Sbjct: 61 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN 120
Query: 378 CLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFG 437
+ D Q L + + L+Y+H S IIH DLKPSN+ ++++ + DFG
Sbjct: 121 IVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 175
Query: 438 MAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
+A+ D +T GY+A + R ++ N D++S G ++ E T
Sbjct: 176 LAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 82/200 (41%), Gaps = 11/200 (5%)
Query: 300 IGRGGFGSVYKAR-IQDGMEVAVKVFDLQY--GRAFKSFDIECDMXXXXXXXXXXXXXXX 356
IG+G F V AR I G EVAV++ D + + E +
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 357 XXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 416
+ LV+EY G + L + + + R + SA++Y H + I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 417 DLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE-YGREGQVSTNG 475
DLK N+LLD +M ++DFG + ++ + + Y APE + +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDEFCGSPPYAAPELFQGKKYDGPEV 194
Query: 476 DVYSFGIMLMETFTRKKPTD 495
DV+S G++L + P D
Sbjct: 195 DVWSLGVILYTLVSGSLPFD 214
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 19/212 (8%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGXVATR 186
Query: 459 GYMAPEYGREG-QVSTNGDVYSFGIMLMETFT 489
Y APE + D++S G ++ E T
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLLKEDQSL 449
IM D+ +A+++LH S I H D+KP N+L + + V L+DFG AK + Q+
Sbjct: 132 EIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK---ETTQNA 185
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
QT T Y+APE + + D++S G+++
Sbjct: 186 LQTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIM 219
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLLKEDQSL 449
IM D+ +A+++LH S I H D+KP N+L + + V L+DFG AK + Q+
Sbjct: 113 EIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK---ETTQNA 166
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
QT T Y+APE + + D++S G+++
Sbjct: 167 LQTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIM 200
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 8/121 (6%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
L+LE++ G L + + +Y + + +N M L+++H I+H D+KP N++
Sbjct: 125 LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIM 181
Query: 425 LDDNMVAHLS--DFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGI 482
+ + + DFG+A L ++ T AT + APE V D+++ G+
Sbjct: 182 CETKKASSVKIIDFGLATKLNPDE---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGV 238
Query: 483 M 483
+
Sbjct: 239 L 239
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 97/239 (40%), Gaps = 36/239 (15%)
Query: 271 ANMPRISNQRRFTYLE-----IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF 324
++M +S +R Y + I++ + + +G G +GSV A + G+ VAVK
Sbjct: 2 SHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL 61
Query: 325 D------LQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEK 377
+ R ++ + M ++F + L ++ L
Sbjct: 62 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN 121
Query: 378 CLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFG 437
+ D Q L + + L+Y+H S IIH DLKPSN+ ++++ + DFG
Sbjct: 122 IVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 176
Query: 438 MAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
+A+ D +T GY+A + R ++ N D++S G ++ E T
Sbjct: 177 LAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 180
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 181 GYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLT 218
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 12/191 (6%)
Query: 300 IGRGGFGSVYKA-RIQDGMEVAVKVFDLQY--GRAFKSFDIECDMXXXXXXXXXXXXXXX 356
IG+G F V + ++ G E A K+ + + R + + E +
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 357 XXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 416
+ F LV + + G L + + + Y + + + LE + + + ++H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREY----YSEADASHCIQQILEAVLHCHQMGVVHR 127
Query: 417 DLKPSNVLLDDN---MVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVST 473
DLKP N+LL L+DFG+A + + Q+ T GY++PE R+
Sbjct: 128 DLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPEVLRKEAYGK 185
Query: 474 NGDVYSFGIML 484
D+++ G++L
Sbjct: 186 PVDIWACGVIL 196
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 14 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 73
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 74 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 131
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 132 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 177
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 178 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 15 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 74
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 75 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 132
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 133 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 178
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 179 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 216
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 93/225 (41%), Gaps = 36/225 (16%)
Query: 283 TYLEIFQATNGFSENNLIGRGGFGSV---YKARIQDGMEVAVKVFD------LQYGRAFK 333
T E+ Q G +G G +GSV Y AR++ +VAVK + R ++
Sbjct: 22 TVWEVPQRLQGLRP---VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYR 76
Query: 334 SFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLN 393
+ + +DF + L G+ + S + D +
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF- 135
Query: 394 IMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 453
++ + L+Y+H S IIH DLKPSNV ++++ + DFG+A+ + D+ +T
Sbjct: 136 LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMT--- 186
Query: 454 TLATIGYMAPEYGREGQVSTNG-------DVYSFGIMLMETFTRK 491
GY+A + R ++ N D++S G ++ E K
Sbjct: 187 -----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 130
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 131 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 176
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
++ SALEYLH S +++ D+K N++LD + ++DFG+ K + + T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCG 167
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
T Y+APE + D + G+++ E + P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 28 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 87
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 88 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 145
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 146 LRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMT-------- 191
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 192 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 97/239 (40%), Gaps = 36/239 (15%)
Query: 271 ANMPRISNQRRFTYLE-----IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVF 324
++M +S +R Y + I++ + + +G G +GSV A + G+ VAVK
Sbjct: 2 SHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL 61
Query: 325 D------LQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEK 377
+ R ++ + M ++F + L ++ L
Sbjct: 62 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN 121
Query: 378 CLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFG 437
+ D Q L + + L+Y+H S IIH DLKPSN+ ++++ + DFG
Sbjct: 122 IVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFG 176
Query: 438 MAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
+A+ D +T GY+A + R ++ N D++S G ++ E T
Sbjct: 177 LAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 14 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 73
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 74 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 131
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 132 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 177
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 178 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 19/208 (9%)
Query: 298 NLIGRGGFGSVYKARIQDGMEV-AVKV---FDLQYGRAFKSFDIECDMXXXXXXXXXXXX 353
+IGRG FG V ++++ + A+K+ +++ F E D+
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL 139
Query: 354 XXXXXXDDFKALVLEYMPHGSLEKCLYS-SNYILDIFQRLNI--MIDVASALEYLHFGYS 410
++ LV++Y G L L + + + R I M+ ++ LH+
Sbjct: 140 HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY--- 196
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGRE-- 468
+H D+KP NVLLD N L+DFG + +D ++ + + T Y++PE +
Sbjct: 197 ---VHRDIKPDNVLLDVNGHIRLADFGSCLK-MNDDGTVQSSVAVGTPDYISPEILQAME 252
Query: 469 ---GQVSTNGDVYSFGIMLMETFTRKKP 493
G+ D +S G+ + E + P
Sbjct: 253 DGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 21/97 (21%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
L+Y+H S IIH DLKPSNV ++++ + DFG+A+ + D+ +T GY+
Sbjct: 136 LKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR---QADEEMT--------GYV 181
Query: 462 APEYGREGQVSTNG-------DVYSFGIMLMETFTRK 491
A + R ++ N D++S G ++ E K
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL--IYQI 134
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMT-------- 180
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 180
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
++ SALEYLH S +++ D+K N++LD + ++DFG+ K + + T
Sbjct: 118 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCG 172
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
T Y+APE + D + G+++ E + P
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 300 IGRGGFGSVYKAR-IQDGMEVAVKVFDLQY--GRAFKSFDIECDMXXXXXXXXXXXXXXX 356
IG+G F V AR I G EVAVK+ D + + E +
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 357 XXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 416
+ LV+EY G + L + + + R + SA++Y H + I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 417 DLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG---YMAPE-YGREGQVS 472
DLK N+LLD +M ++DFG + ++ + A G Y APE + +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS------NEFTFGNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 473 TNGDVYSFGIMLMETFTRKKPTD 495
DV+S G++L + P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 180
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 180
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 139
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 140 LRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMT-------- 185
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 91/228 (39%), Gaps = 28/228 (12%)
Query: 300 IGRGGFGSVYKARIQD-GMEVAVKVF-DLQYGRAFKSFDI-ECDMXXXXXXXXXXXXXXX 356
IG G +G V+K R +D G VA+K F + + K + E M
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 357 XXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVAS----ALEYLHFGYSVP 412
LV EY H L + LD +QR V S L+ ++F +
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHE--------LDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 413 IIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE-YGREGQV 471
IH D+KP N+L+ + V L DFG A+ L S +AT Y +PE + Q
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFAR--LLTGPSDYYDDEVATRWYRSPELLVGDTQY 180
Query: 472 STNGDVYSFGIMLME------TFTRKKPTDEIFFGDMTLKHWVNDLLP 513
DV++ G + E + K D+++ TL DL+P
Sbjct: 181 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTL----GDLIP 224
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 97/240 (40%), Gaps = 39/240 (16%)
Query: 273 MPRISN--QRRFTYLE------IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKV 323
+PR S+ Q R T+ I++ + + +G G +GSV A + G+ VAVK
Sbjct: 14 VPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 73
Query: 324 FD------LQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLE 376
+ R ++ + M ++F + L ++ L
Sbjct: 74 LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN 133
Query: 377 KCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDF 436
+ D Q L + + L+Y+H S IIH DLKPSN+ ++++ + DF
Sbjct: 134 NIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 188
Query: 437 GMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
G+A+ D +T GY+A + R ++ N D++S G ++ E T
Sbjct: 189 GLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 180
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 97/240 (40%), Gaps = 39/240 (16%)
Query: 273 MPRISN--QRRFTYLE------IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKV 323
+PR S+ Q R T+ I++ + + +G G +GSV A + G+ VAVK
Sbjct: 15 VPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 74
Query: 324 FD------LQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLE 376
+ R ++ + M ++F + L ++ L
Sbjct: 75 LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN 134
Query: 377 KCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDF 436
+ D Q L + + L+Y+H S IIH DLKPSN+ ++++ + DF
Sbjct: 135 NIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 189
Query: 437 GMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
G+A+ D +T GY+A + R ++ N D++S G ++ E T
Sbjct: 190 GLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
++ SALEYLH S +++ D+K N++LD + ++DFG+ K + + T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCG 167
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
T Y+APE + D + G+++ E + P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 80/191 (41%), Gaps = 12/191 (6%)
Query: 300 IGRGGFGSVYKA-RIQDGMEVAVKVFDLQY--GRAFKSFDIECDMXXXXXXXXXXXXXXX 356
+G+G F V + +I G E A K+ + + R + + E +
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 357 XXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 416
+ F LV + + G L + + + Y + + + LE ++ + I+H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREY----YSEADASHCIQQILESVNHCHLNGIVHR 127
Query: 417 DLKPSNVLL---DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVST 473
DLKP N+LL L+DFG+A + + Q+ T GY++PE R+
Sbjct: 128 DLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPEVLRKDPYGK 185
Query: 474 NGDVYSFGIML 484
D+++ G++L
Sbjct: 186 PVDMWACGVIL 196
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 139
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 140 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 185
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
++ SALEYLH S +++ D+K N++LD + ++DFG+ K + + T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCG 167
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
T Y+APE + D + G+++ E + P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 16 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 75
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 76 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 133
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 134 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 179
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 180 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 217
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 180
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLME 486
APE N D++S G+++ E
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGE 217
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 83/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPAIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL--IYQI 134
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 180
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLME 486
APE N D++S G+++ E
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGE 217
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 19/208 (9%)
Query: 298 NLIGRGGFGSVYKARIQDGMEV-AVKV---FDLQYGRAFKSFDIECDMXXXXXXXXXXXX 353
+IGRG FG V ++++ + A+K+ +++ F E D+
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL 155
Query: 354 XXXXXXDDFKALVLEYMPHGSLEKCLYS-SNYILDIFQRLNI--MIDVASALEYLHFGYS 410
++ LV++Y G L L + + + R I M+ ++ LH+
Sbjct: 156 HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY--- 212
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGRE-- 468
+H D+KP NVLLD N L+DFG + +D ++ + + T Y++PE +
Sbjct: 213 ---VHRDIKPDNVLLDVNGHIRLADFGSCLK-MNDDGTVQSSVAVGTPDYISPEILQAME 268
Query: 469 ---GQVSTNGDVYSFGIMLMETFTRKKP 493
G+ D +S G+ + E + P
Sbjct: 269 DGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 136
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 137 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 182
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 21/97 (21%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
L+Y+H S IIH DLKPSNV ++++ + DFG+A+ + D+ +T GY+
Sbjct: 144 LKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMT--------GYV 189
Query: 462 APEYGREGQVSTNG-------DVYSFGIMLMETFTRK 491
A + R ++ N D++S G ++ E K
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 17/133 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
LV E M GS+ ++ + ++ + ++ DVASAL++LH + I H DLKP N+L
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASV-VVQDVASALDFLH---NKGIAHRDLKPENIL 143
Query: 425 LDD-NMVA--HLSDFGMAKPL-LKEDQSLTQTQTLAT----IGYMAPE----YGREGQV- 471
+ N V+ + DFG+ + L D S T L T YMAPE + E +
Sbjct: 144 CEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIY 203
Query: 472 STNGDVYSFGIML 484
D++S G++L
Sbjct: 204 DKRCDLWSLGVIL 216
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 180
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 87/212 (41%), Gaps = 20/212 (9%)
Query: 299 LIGRGGFGSVYKARIQDGMEV-AVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXX 357
++G+G FG V + + E+ AVK+ L+ + D+EC M
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKI--LKKDVVIQDDDVECTMVEKRVLALPGKPPFLT 84
Query: 358 XXD------DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 411
D V+EY+ G L +Y + F+ + + A L F S
Sbjct: 85 QLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 412 PIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQV 471
II+ DLK NV+LD ++DFGM K + + +T T Y+APE
Sbjct: 141 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--GVTTKXFCGTPDYIAPEIIAYQPY 198
Query: 472 STNGDVYSFGIMLMETFTRKKP-----TDEIF 498
+ D ++FG++L E + P DE+F
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF 230
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
++ SALEYLH S +++ D+K N++LD + ++DFG+ K + + T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCG 167
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
T Y+APE + D + G+++ E + P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 180
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLK 88
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 146
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 147 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 192
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + S D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFL--IYQI 134
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+ + D +T
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCR---HTDDEMT-------- 180
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 141
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 142 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 187
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 136
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 137 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 182
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 19/212 (8%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 136
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 137 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 188
Query: 459 GYMAPEYGREG-QVSTNGDVYSFGIMLMETFT 489
Y APE + D++S G ++ E T
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 80/191 (41%), Gaps = 12/191 (6%)
Query: 300 IGRGGFGSVYKA-RIQDGMEVAVKVFDLQY--GRAFKSFDIECDMXXXXXXXXXXXXXXX 356
+G+G F V + +I G E A K+ + + R + + E +
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 357 XXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 416
+ F LV + + G L + + + Y + + + LE ++ + I+H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREY----YSEADASHCIQQILESVNHCHLNGIVHR 127
Query: 417 DLKPSNVLL---DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVST 473
DLKP N+LL L+DFG+A + + Q+ T GY++PE R+
Sbjct: 128 DLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPEVLRKDPYGK 185
Query: 474 NGDVYSFGIML 484
D+++ G++L
Sbjct: 186 PVDMWACGVIL 196
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 88
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 146
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 147 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 192
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
++ SALEYLH S +++ D+K N++LD + ++DFG+ K + + T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCG 167
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
T Y+APE + D + G+++ E + P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 88
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 146
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 147 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 192
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 28 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 87
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 88 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 145
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 146 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 191
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 192 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 136
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 137 LRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMT-------- 182
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
++ SALEYLH S +++ D+K N++LD + ++DFG+ K + + T
Sbjct: 116 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCG 170
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
T Y+APE + D + G+++ E + P
Sbjct: 171 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
APE N D++S G ++ E K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Query: 374 SLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHL 433
SL++ + L Q + D AL +LH S ++H D+KP+N+ L L
Sbjct: 142 SLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKL 198
Query: 434 SDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMET 487
DFG+ L Q YMAPE +G T DV+S G+ ++E
Sbjct: 199 GDFGLLVELGTAGAGEVQE---GDPRYMAPEL-LQGSYGTAADVFSLGLTILEV 248
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 11/126 (8%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQT 452
I + + ALE+LH SV IH D+KPSNVL++ DFG++ L+ + + +
Sbjct: 140 KIAVSIVKALEHLHSKLSV--IHRDVKPSNVLINALGQVKXCDFGISGYLVDD---VAKD 194
Query: 453 QTLATIGYMAPEY-----GREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHW 507
Y APE ++G S D++S GI +E + P D LK
Sbjct: 195 IDAGCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQV 253
Query: 508 VNDLLP 513
V + P
Sbjct: 254 VEEPSP 259
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 87/212 (41%), Gaps = 20/212 (9%)
Query: 299 LIGRGGFGSVYKARIQDGMEV-AVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXXXX 357
++G+G FG V + + E+ AVK+ L+ + D+EC M
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKI--LKKDVVIQDDDVECTMVEKRVLALPGKPPFLT 405
Query: 358 XXD------DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 411
D V+EY+ G L +Y + F+ + + A L F S
Sbjct: 406 QLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSK 461
Query: 412 PIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQV 471
II+ DLK NV+LD ++DFGM K + + +T T Y+APE
Sbjct: 462 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--GVTTKXFCGTPDYIAPEIIAYQPY 519
Query: 472 STNGDVYSFGIMLMETFTRKKP-----TDEIF 498
+ D ++FG++L E + P DE+F
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF 551
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 50 NKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTLWN-LKDILYLDLSSNFL------LIG 102
N++ P F +L NL+ LY SNKLT+IP+ +++ L + LDL+ N L
Sbjct: 43 NQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFD 102
Query: 103 NLKVLVQVDLSMN 115
NLK L + L N
Sbjct: 103 NLKSLTHIYLYNN 115
Score = 36.2 bits (82), Expect = 0.049, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 19 QLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTS 78
Q L L +NQ+ P L L +L NKL F LT L L L N L S
Sbjct: 36 QRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKS 95
Query: 79 IPSTLW-NLKDILYLDLSSN 97
IP + NLK + ++ L +N
Sbjct: 96 IPRGAFDNLKSLTHIYLYNN 115
Score = 30.0 bits (66), Expect = 3.2, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 10/86 (11%)
Query: 9 PIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRN 68
P L LQ L N+L +L L +LD N L F NL +L +
Sbjct: 50 PGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTH 109
Query: 69 LYLGSNKLTSIPSTLWN--LKDILYL 92
+YL +N W+ +DI+YL
Sbjct: 110 IYLYNNP--------WDCECRDIMYL 127
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 87/220 (39%), Gaps = 21/220 (9%)
Query: 298 NLIGRGGFGSVYKARI-QDGMEVAVKV---FDLQYGRAFKSFDIECDMXXXXXXXXXXXX 353
+IGRG F V ++ Q G A+K+ +D+ F E D+
Sbjct: 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQL 126
Query: 354 XXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLH-FGYSVP 412
+++ LV+EY G L L + + ++ A++ +H GY
Sbjct: 127 HFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGY--- 183
Query: 413 IIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE-------Y 465
+H D+KP N+LLD L+DFG L+ D ++ + T Y++PE
Sbjct: 184 -VHRDIKPDNILLDRCGHIRLADFGSCLK-LRADGTVRSLVAVGTPDYLSPEILQAVGGG 241
Query: 466 GREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
G D ++ G+ E F + P F+ D T +
Sbjct: 242 PGTGSYGPECDWWALGVFAYEMFYGQTP----FYADSTAE 277
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
APE N D++S G ++ E K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 8 IPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLR 67
+ + G + +LL L N+++ D+ L EL+ N + P F NL NLR
Sbjct: 24 VAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLR 83
Query: 68 NLYLGSNKLTSIPSTLWN-LKDILYLDLSSNFLLI------GNLKVLVQVDLSMNNFSDV 120
L L SN+L IP ++ L ++ LD+S N ++I +L L +++ N+ +
Sbjct: 84 TLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYI 143
Query: 121 IPTTIGGLKDLQYLFLEYNRLQGSIP 146
GL L+ L LE L SIP
Sbjct: 144 SHRAFSGLNSLEQLTLEKCNLT-SIP 168
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 131 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYY 184
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
APE N D++S G ++ E K
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 140
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 141 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 186
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 90/218 (41%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKAR-IQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV + ++ G+++AVK + R ++ +
Sbjct: 46 IWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLK 105
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 106 HMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 163
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 164 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 209
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 210 GYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLT 247
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 137 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 190
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
APE N D++S G ++ E K
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 192
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
APE N D++S G ++ E K
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 131 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 184
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
APE N D++S G ++ E K
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 192
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
APE N D++S G ++ E K
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G VAVK + R ++ +
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + + D Q L + +
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFL--IYQI 130
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 131 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 176
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
APE N D++S G ++ E K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 185
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
APE N D++S G ++ E K
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
APE N D++S G ++ E K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
APE N D++S G ++ E K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
APE N D++S G ++ E K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 185
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
APE N D++S G ++ E K
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLLKEDQSLTQTQT 454
V A+ YLH + I+H DLKP N+L D+ +SDFG++K K D +
Sbjct: 129 VLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTA 182
Query: 455 LATIGYMAPEYGREGQVSTNGDVYSFGIM 483
T GY+APE + S D +S G++
Sbjct: 183 CGTPGYVAPEVLAQKPYSKAVDCWSIGVI 211
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 29/202 (14%)
Query: 365 LVLEYMPHGSL-EKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
L+LEY G + CL + ++ +++ + LE +++ + I+H DLKP N+
Sbjct: 106 LILEYAAGGEIFSLCLPE---LAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNI 162
Query: 424 LLDDNMV---AHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSF 480
LL + DFGM++ + + + + T Y+APE ++T D+++
Sbjct: 163 LLSSIYPLGDIKIVDFGMSRKI---GHACELREIMGTPEYLAPEILNYDPITTATDMWNI 219
Query: 481 GIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVS 540
GI+ T P F G+ + ++N I N + +E F++ Q +
Sbjct: 220 GIIAYMLLTHTSP----FVGEDNQETYLN---------ISQVN-VDYSEETFSSVSQLAT 265
Query: 541 -FIFNLAMKCTVESPEQRINAK 561
FI +L +K +PE+R A+
Sbjct: 266 DFIQSLLVK----NPEKRPTAE 283
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
++ SAL+YLH +V ++ DLK N++LD + ++DFG+ K +K+ T
Sbjct: 259 EIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKTFCG 314
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
T Y+APE + D + G+++ E + P
Sbjct: 315 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 83/218 (38%), Gaps = 21/218 (9%)
Query: 294 FSENNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXX 352
F +G G FG V + ++ G A+K+ D Q + K IE +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ--KVVKLKQIEHTLNEKRILQAVNF 100
Query: 353 XXXXXXXDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 407
FK +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 408 GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
S+ +I+ DLKP N+L+D ++DFG AK + L T +APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEA-----LAPEIIL 211
Query: 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505
+ D ++ G+++ E P FF D ++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQ 245
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
++ SAL+YLH +V ++ DLK N++LD + ++DFG+ K +K+ T
Sbjct: 256 EIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKTFCG 311
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
T Y+APE + D + G+++ E + P
Sbjct: 312 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 176 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 229
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
APE N D++S G ++ E K
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 176 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 229
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
APE N D++S G ++ E K
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
++ SAL+YLH +V ++ DLK N++LD + ++DFG+ K +K+ T
Sbjct: 116 EIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKXFCG 171
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
T Y+APE + D + G+++ E + P
Sbjct: 172 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
++ SAL+YLH +V ++ DLK N++LD + ++DFG+ K +K+ T
Sbjct: 117 EIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKXFCG 172
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
T Y+APE + D + G+++ E + P
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 11/123 (8%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
LV E+ G L + + + + D NIM + S + YLH I+H D+KP N+L
Sbjct: 123 LVTEFYEGGELFEQIINR-HKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENIL 178
Query: 425 LDDN---MVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFG 481
L++ + + DFG++ +D L L T Y+APE ++ + + DV+S G
Sbjct: 179 LENKNSLLNIKIVDFGLS-SFFSKDYKL--RDRLGTAYYIAPEVLKK-KYNEKCDVWSCG 234
Query: 482 IML 484
+++
Sbjct: 235 VIM 237
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 394 IMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 453
++ + +++LH S IIH DLKPSN+++ + + DFG+A+ S T
Sbjct: 136 LLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTP 189
Query: 454 TLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
+ T Y APE N D++S G ++ E K
Sbjct: 190 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 397 DVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
++ SAL+YLH +V ++ DLK N++LD + ++DFG+ K +K+ T
Sbjct: 118 EIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKXFCG 173
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493
T Y+APE + D + G+++ E + P
Sbjct: 174 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 16/179 (8%)
Query: 297 NNLIGRGGFGSVYKA-RIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXX 355
+ L+G G + V A +Q+G E AVK+ + Q G + E +
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 356 XXXXDDFK-ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 414
DD + LV E + GS+ + + + + ++ DVA+AL++LH + I
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKH-FNEREASRVVRDVAAALDFLH---TKGIA 133
Query: 415 HCDLKPSNVLLDDN---MVAHLSDFGMAKPLLKEDQSLTQTQT------LATIGYMAPE 464
H DLKP N+L + + DF + +K + S T T + YMAPE
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDFDLGSG-MKLNNSCTPITTPELTTPCGSAEYMAPE 191
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 87/218 (39%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G VAVK + R ++ +
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 130
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 131 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 176
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPEVVTRYY 191
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLME 486
APE N D++S G ++ E
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 185
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
APE N D++S G ++ E K
Sbjct: 186 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + D+G+A+ D +T
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLAR---HTDDEMT-------- 180
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 96/240 (40%), Gaps = 39/240 (16%)
Query: 273 MPRISN--QRRFTYLE------IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKV 323
+PR S+ Q R T+ I++ + + +G G +GSV A + G VAVK
Sbjct: 14 VPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK 73
Query: 324 FD------LQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLE 376
+ R ++ + M ++F + L ++ L
Sbjct: 74 LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN 133
Query: 377 KCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDF 436
+ D Q L + + L+Y+H S IIH DLKPSN+ ++++ + DF
Sbjct: 134 NIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 188
Query: 437 GMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
G+A+ D +T GY+A + R ++ N D++S G ++ E T
Sbjct: 189 GLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 405 LHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE 464
LH + ++H DL P N+LL DN + DF +A+ ++ +T + Y APE
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYRAPE 203
Query: 465 YGREGQVSTN-GDVYSFGIMLMETFTRK 491
+ + T D++S G ++ E F RK
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 405 LHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE 464
LH + ++H DL P N+LL DN + DF +A+ ++ +T + Y APE
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYRAPE 203
Query: 465 YGREGQVSTN-GDVYSFGIMLMETFTRK 491
+ + T D++S G ++ E F RK
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 87/218 (39%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G VAVK + R ++ +
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-------- 180
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 96/240 (40%), Gaps = 39/240 (16%)
Query: 273 MPRISN--QRRFTYLE------IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKV 323
+PR S+ Q R T+ I++ + + +G G +GSV A + G VAVK
Sbjct: 15 VPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK 74
Query: 324 FD------LQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLE 376
+ R ++ + M ++F + L ++ L
Sbjct: 75 LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN 134
Query: 377 KCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDF 436
+ D Q L + + L+Y+H S IIH DLKPSN+ ++++ + DF
Sbjct: 135 NIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 189
Query: 437 GMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
G+A+ D +T GY+A + R ++ N D++S G ++ E T
Sbjct: 190 GLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 394 IMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMAKPLLKEDQSLT 450
I + A++YLH S+ I H D+KP N+L N + L+DFG AK + +
Sbjct: 166 IXKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 219
Query: 451 QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 483
T T Y+APE + + D +S G++
Sbjct: 220 LTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVI 252
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 21/103 (20%)
Query: 394 IMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 453
++ + L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 140 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--- 190
Query: 454 TLATIGYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 191 -----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 228
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLME 486
APE N D++S G ++ E
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 398 VASALEYLHFGYSVPIIHCDLKPSNVLLDD-NMVAHLSDFGMAKPLLKEDQSLTQTQTLA 456
+ L++LH + PIIH DLK N+ + + D G+A LK ++ +
Sbjct: 138 ILKGLQFLH-TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA--TLK--RASFAKAVIG 192
Query: 457 TIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPIS- 515
T + APE E + + DVY+FG +E T + P E + + + P S
Sbjct: 193 TPEFXAPEXYEE-KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASF 251
Query: 516 -------VMEIVDANLLSQKDEHFTTK 535
V EI++ + KDE ++ K
Sbjct: 252 DKVAIPEVKEIIEGCIRQNKDERYSIK 278
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLME 486
APE N D++S G ++ E
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 192
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLME 486
APE N D++S G ++ E
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGE 218
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLME 486
APE N D++S G ++ E
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLME 486
APE N D++S G ++ E
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 42.4 bits (98), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 19 QLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTS 78
Q+L L DNQ+ P RL L LD N+L F LT L L L N+L S
Sbjct: 41 QVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKS 100
Query: 79 IPSTLW-NLKDILYLDLSSN 97
IP + NLK + ++ L +N
Sbjct: 101 IPRGAFDNLKSLTHIWLLNN 120
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLME 486
APE N D++S G ++ E
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 394 IMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMAKPLLKEDQSLT 450
I+ V S + YLH I+H DLKP N+LL+ + + + DFG++ E+Q
Sbjct: 141 IIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF--ENQK-K 194
Query: 451 QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ L T Y+APE R+ + DV+S G++L
Sbjct: 195 MKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVIL 227
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 42.4 bits (98), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 19 QLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTS 78
Q+L L DNQ+ P RL L LD N+L F LT L L L N+L S
Sbjct: 33 QVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKS 92
Query: 79 IPSTLW-NLKDILYLDLSSN 97
IP + NLK + ++ L +N
Sbjct: 93 IPRGAFDNLKSLTHIWLLNN 112
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 94/236 (39%), Gaps = 31/236 (13%)
Query: 269 NDANMPRISNQRRFTYLEIFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD-- 325
++A+ R + R+ I++ + + +G G +GSV A + G+ VAVK
Sbjct: 22 SNASQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 81
Query: 326 ----LQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLY 380
+ R ++ + M ++F + L ++ L +
Sbjct: 82 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 141
Query: 381 SSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAK 440
D Q L + + L+Y+H S IIH DLKPSN+ ++++ + DFG+A+
Sbjct: 142 CQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 196
Query: 441 PLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
E GY+A + R ++ N D++S G ++ E T
Sbjct: 197 HTDDE-----------MXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 80/204 (39%), Gaps = 19/204 (9%)
Query: 300 IGRGGFGSVYKAR-IQDGMEVAVKVFDLQY--GRAFKSFDIECDMXXXXXXXXXXXXXXX 356
IG+G F V AR I G EVA+K+ D + + E +
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 357 XXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 416
+ L++EY G + L + + + R + SA++Y H I+H
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH---QKRIVHR 135
Query: 417 DLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI----GYMAPE-YGREGQV 471
DLK N+LLD +M ++DFG + T L T Y APE + +
Sbjct: 136 DLKAENLLLDADMNIKIADFGFS-------NEFTVGGKLDTFCGSPPYAAPELFQGKKYD 188
Query: 472 STNGDVYSFGIMLMETFTRKKPTD 495
DV+S G++L + P D
Sbjct: 189 GPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLME 486
APE N D++S G ++ E
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 78/201 (38%), Gaps = 21/201 (10%)
Query: 298 NLIGRGGFGSVYKA-RIQDGMEVAVKVFDLQY-----GRAFKSFDIECDMXXXXXXXXXX 351
+IG+G F V + + G + AVK+ D+ G + + E +
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 352 XXXXXXXXDDFKALVLEYMPHGSLEKCL-----YSSNYILDIFQRLNIMIDVASALEYLH 406
D +V E+M L C + ++ + M + AL Y H
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADL--CFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 407 FGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463
IIH D+KP NVLL +++ L DFG+A L + L + T +MAP
Sbjct: 148 ---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL--GESGLVAGGRVGTPHFMAP 202
Query: 464 EYGREGQVSTNGDVYSFGIML 484
E + DV+ G++L
Sbjct: 203 EVVKREPYGKPVDVWGCGVIL 223
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 21/103 (20%)
Query: 394 IMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 453
++ + L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ D +T
Sbjct: 136 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--- 186
Query: 454 TLATIGYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 187 -----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 6 GSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLC-RLAALFELDSGGNKLDGFVPACFGNLT 64
G + G + L LE N L+ S+P+ + L +L +L GGNKL F LT
Sbjct: 18 GRTSVPTGIPAQTTYLDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLT 76
Query: 65 NLRNLYLGSNKLTSIPSTLWN-LKDILYLDLSSNFL------LIGNLKVLVQVDLSMNNF 117
+L L L +N+L S+P+ +++ L + L L++N L + L L + L N
Sbjct: 77 SLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQL 136
Query: 118 SDVIPTTIGGLKDLQYLFLEYNRLQGSIP 146
V L LQY++L N + P
Sbjct: 137 KSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 1 GNNLNGSIPIAV-GKLQKLQLLSLEDNQLEGSIPDDLC-RLAALFELDSGGNKLDGFVPA 58
GN L S+P V KL L L+L NQL+ S+P+ + +L L EL N+L
Sbjct: 61 GNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQSLPDG 118
Query: 59 CFGNLTNLRNLYLGSNKLTSIPSTLWN-LKDILYLDLSSN 97
F LT L++L L N+L S+P +++ L + Y+ L N
Sbjct: 119 VFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDN 158
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
+++LH S IIH DLKPSN+++ + + DFG+A+ + T + T Y
Sbjct: 139 IKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACT---NFMMTPYVVTRYYR 192
Query: 462 APEYGREGQVSTNGDVYSFGIMLME 486
APE + N D++S G ++ E
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGE 217
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMEPEVVTRYY 191
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
APE N D++S G ++ E K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 82/203 (40%), Gaps = 17/203 (8%)
Query: 300 IGRGGFGSVYKAR-IQDGMEVAVKVFDLQY--GRAFKSFDIECDMXXXXXXXXXXXXXXX 356
IG+G F V AR I G EVA+K+ D + + E +
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 357 XXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 416
+ L++EY G + L + + + R + SA++Y H I+H
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH---QKRIVHR 138
Query: 417 DLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG---YMAPE-YGREGQVS 472
DLK N+LLD +M ++DFG + ++ + A G Y APE + +
Sbjct: 139 DLKAENLLLDADMNIKIADFGFS------NEFTVGGKLDAFCGAPPYAAPELFQGKKYDG 192
Query: 473 TNGDVYSFGIMLMETFTRKKPTD 495
DV+S G++L + P D
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 11 AVGKLQKLQLLSLEDNQLEGSIPDDLC-RLAALFELDSGGNKLDGFVPACFGNLTNLRNL 69
A+ +L L L L NQL+ S+P+ + +L L EL N+L F LTNL L
Sbjct: 80 ALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYL 138
Query: 70 YLGSNKLTSIPSTLWN-LKDILYLDLSSNFL------LIGNLKVLVQVDLSMNNFSDVIP 122
L N+L S+P +++ L ++ LDLS N L + L L + L N V
Sbjct: 139 NLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPD 198
Query: 123 TTIGGLKDLQYLFLEYNRLQGSIP 146
L LQY++L N + P
Sbjct: 199 GVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 63 LTNLRNLYLGSNKLTSIPSTLWNLKDILYLDLSSN---------FLLIGNLKVLVQVDLS 113
L N+R L LG NKL I S L L ++ YL L+ N F + NLK LV V+
Sbjct: 62 LPNVRYLALGGNKLHDI-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQ 120
Query: 114 MNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDXXXXXXXXXXXXXXXGTIPISL 173
+ + D + L +L YL L +N+LQ S+P + D ++P +
Sbjct: 121 LQSLPDGV---FDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQLQSLPEGV 176
Query: 174 -EKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESF---EGNELLCGMPNLQ 220
+KL LKD+ + N+L+ +P+ G F ++ + N C P ++
Sbjct: 177 FDKLTQLKDLRLYQNQLKS-VPD-GVFDRLTSLQYIWLHDNPWDCTCPGIR 225
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 7 SIPIAV-GKLQKLQLLSLEDNQLEGSIPDDLC-RLAALFELDSGGNKLDGFVPACFGNLT 64
S+P V KL L L+L NQL+ S+P + +L L ELD N+L F LT
Sbjct: 123 SLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLT 181
Query: 65 NLRNLYLGSNKLTSIPSTLWN-LKDILYLDLSSN 97
L++L L N+L S+P +++ L + Y+ L N
Sbjct: 182 QLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDN 215
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 14/178 (7%)
Query: 294 FSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXX 353
F +++G G G++ + D +VAVK F D E +
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRI---LPECFSFADREVQLLRESDEHPNVIR 82
Query: 354 XXXXXXD-DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 412
D F+ + +E +L++ + ++ + + ++ S L +LH S+
Sbjct: 83 YFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLN 138
Query: 413 IIHCDLKPSNVLLD-----DNMVAHLSDFGMAKPLLKEDQSLTQTQTL-ATIGYMAPE 464
I+H DLKP N+L+ + A +SDFG+ K L S ++ + T G++APE
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 80/191 (41%), Gaps = 12/191 (6%)
Query: 300 IGRGGFGSVYKA-RIQDGMEVAVKVFDLQY--GRAFKSFDIECDMXXXXXXXXXXXXXXX 356
+G+G F V + ++ G E A K+ + + R + + E +
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 357 XXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 416
+ L+ + + G L + + + Y + + + LE + + + ++H
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREY----YSEADASHCIQQILEAVLHCHQMGVVHR 145
Query: 417 DLKPSNVLLDDNM---VAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVST 473
DLKP N+LL + L+DFG+A + E Q+ T GY++PE R+
Sbjct: 146 DLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLSPEVLRKDPYGK 203
Query: 474 NGDVYSFGIML 484
D+++ G++L
Sbjct: 204 PVDLWACGVIL 214
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
L+ L F + I+H DLKP N+L++ L DFG+A+ + + + T+ Y
Sbjct: 118 LQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF--SSEVVTLWYR 175
Query: 462 APEYGREGQV-STNGDVYSFGIMLMETFTRK 491
AP+ + ST+ D++S G +L E T K
Sbjct: 176 APDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 12/199 (6%)
Query: 300 IGRGGFGSVYKARIQDGMEVA----VKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXX 355
IG G +G+V+KA+ ++ E+ V++ D G + C +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREIC-LLKELKHKNIVRLHD 68
Query: 356 XXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIH 415
D LV E+ L+K S N LD + + + L + H S ++H
Sbjct: 69 VLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLH 124
Query: 416 CDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQV-STN 474
DLKP N+L++ N L+DFG+A+ + + + T+ Y P+ ++ ST+
Sbjct: 125 RDLKPQNLLINRNGELKLADFGLARAFGIPVRCY--SAEVVTLWYRPPDVLFGAKLYSTS 182
Query: 475 GDVYSFGIMLMETFTRKKP 493
D++S G + E +P
Sbjct: 183 IDMWSAGCIFAELANAARP 201
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 17/194 (8%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXXXXXXXXX 357
IG G +G VYKA+ G A+K L+ S I E +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 417
LV E++ L+K L L+ + ++ + + + Y H ++H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 418 LKPSNVLLDDNMVAHLSDFGMAK----PLLKEDQSLTQTQTLATIGYMAPEY-GREGQVS 472
LKP N+L++ ++DFG+A+ P+ K T + T+ Y AP+ + S
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRK------YTHEIVTLWYRAPDVLMGSKKYS 179
Query: 473 TNGDVYSFGIMLME 486
T D++S G + E
Sbjct: 180 TTIDIWSVGCIFAE 193
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 103/243 (42%), Gaps = 42/243 (17%)
Query: 284 YLEIFQATNGFSENNLIGRGGFGSVY--KARIQDGME--VAVKVFDLQYGRAFKSFDIEC 339
Y + Q +N F + IG G F SVY A++Q G E +A+K + +++C
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQC 72
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVA 399
+ +D + + Y+ H S L S L + M+++
Sbjct: 73 -LTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS----LSFQEVREYMLNLF 127
Query: 400 SALEYLH-FGYSVPIIHCDLKPSNVLLDDNMVAH-LSDFGMAK-------PLLKEDQS-- 448
AL+ +H FG I+H D+KPSN L + + + L DFG+A+ LLK QS
Sbjct: 128 KALKRIHQFG----IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEA 183
Query: 449 -------------LTQTQTLA----TIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTR 490
L++ Q +A T G+ APE + T D++S G++ + +
Sbjct: 184 QQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSG 243
Query: 491 KKP 493
+ P
Sbjct: 244 RYP 246
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 81/200 (40%), Gaps = 12/200 (6%)
Query: 299 LIGRGGFGSVYKARIQDGMEV-AVKVFD---LQYGRAFKSFDIECDMXXXXXXXXXXXXX 354
+G+GGF ++ D EV A K+ L + +E +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 355 XXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 414
+DF +VLE SL + L+ L + + + +YLH +I
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 139
Query: 415 HCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAPEYGREGQVST 473
H DLK N+ L++++ + DFG+A K + + +TL T Y+APE + S
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 474 NGDVYSFGIMLMETFTRKKP 493
DV+S G ++ K P
Sbjct: 197 EVDVWSIGCIMYTLLVGKPP 216
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 81/200 (40%), Gaps = 12/200 (6%)
Query: 299 LIGRGGFGSVYKARIQDGMEV-AVKVFD---LQYGRAFKSFDIECDMXXXXXXXXXXXXX 354
+G+GGF ++ D EV A K+ L + +E +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 355 XXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 414
+DF +VLE SL + L+ L + + + +YLH +I
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 139
Query: 415 HCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAPEYGREGQVST 473
H DLK N+ L++++ + DFG+A K + + +TL T Y+APE + S
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 474 NGDVYSFGIMLMETFTRKKP 493
DV+S G ++ K P
Sbjct: 197 EVDVWSIGCIMYTLLVGKPP 216
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 81/200 (40%), Gaps = 12/200 (6%)
Query: 299 LIGRGGFGSVYKARIQDGMEV-AVKVFD---LQYGRAFKSFDIECDMXXXXXXXXXXXXX 354
+G+GGF ++ D EV A K+ L + +E +
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 355 XXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 414
+DF +VLE SL + L+ L + + + +YLH +I
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 143
Query: 415 HCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAPEYGREGQVST 473
H DLK N+ L++++ + DFG+A K + + +TL T Y+APE + S
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 200
Query: 474 NGDVYSFGIMLMETFTRKKP 493
DV+S G ++ K P
Sbjct: 201 EVDVWSIGCIMYTLLVGKPP 220
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 78/191 (40%), Gaps = 12/191 (6%)
Query: 300 IGRGGFGSVYKA-RIQDGMEVAVKVFDLQY--GRAFKSFDIECDMXXXXXXXXXXXXXXX 356
+G+G F V + + E A K+ + + R + + E +
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 357 XXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 416
+ F LV + + G L + + + Y + + + LE ++ + I+H
Sbjct: 99 ISEEGFHYLVFDLVTGGELFEDIVAREY----YSEADASHCIHQILESVNHIHQHDIVHR 154
Query: 417 DLKPSNVLLDDN---MVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVST 473
DLKP N+LL L+DFG+A + E Q+ T GY++PE R+
Sbjct: 155 DLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFA--GTPGYLSPEVLRKDPYGK 212
Query: 474 NGDVYSFGIML 484
D+++ G++L
Sbjct: 213 PVDIWACGVIL 223
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 17/194 (8%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXXXXXXXXX 357
IG G +G VYKA+ G A+K L+ S I E +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 417
LV E++ L+K L L+ + ++ + + + Y H ++H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 418 LKPSNVLLDDNMVAHLSDFGMAK----PLLKEDQSLTQTQTLATIGYMAPEY-GREGQVS 472
LKP N+L++ ++DFG+A+ P+ K T + T+ Y AP+ + S
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRK------YTHEVVTLWYRAPDVLMGSKKYS 179
Query: 473 TNGDVYSFGIMLME 486
T D++S G + E
Sbjct: 180 TTIDIWSVGCIFAE 193
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 20/145 (13%)
Query: 363 KALVLEYMPHGSLEKCLY--SSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKP 420
K L++E+ P GSL L S+ Y L + L ++ DV + +L I+H ++KP
Sbjct: 84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKP 140
Query: 421 SNVLL----DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE-YGR-------E 468
N++ D V L+DFG A+ L ++Q ++ T Y+ P+ Y R +
Sbjct: 141 GNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS---LYGTEEYLHPDMYERAVLRKDHQ 197
Query: 469 GQVSTNGDVYSFGIMLMETFTRKKP 493
+ D++S G+ T P
Sbjct: 198 KKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 82/195 (42%), Gaps = 19/195 (9%)
Query: 300 IGRGGFGSVYKARIQDGMEVAVKVFDLQY-GRAFKSFDI-ECDMXXXXXXXXXXXXXXXX 357
IG G +G VYKA+ G A+K L+ S I E +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 358 XXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 417
LV E++ L+K L L+ + ++ + + + Y H ++H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 418 LKPSNVLLDDNMVAHLSDFGMAK----PLLKEDQSLTQTQTLATIGYMAPEY--GREGQV 471
LKP N+L++ ++DFG+A+ P+ K T + T+ Y AP+ G + +
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRK------YTHEVVTLWYRAPDVLMGSK-KY 178
Query: 472 STNGDVYSFGIMLME 486
ST D++S G + E
Sbjct: 179 STTIDIWSVGCIFAE 193
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + FG+A+ D +T
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLAR---HTDDEMT-------- 180
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 27/234 (11%)
Query: 273 MPRISN--QRRFTYLE------IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKV 323
+PR S+ Q R T+ I++ + + +G G +GSV A + G VAVK
Sbjct: 15 VPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK 74
Query: 324 FD------LQYGRAFKSFDIECDMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLE 376
+ R ++ + M ++F + L ++ L
Sbjct: 75 LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN 134
Query: 377 KCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDF 436
+ D Q L + + L+Y+H S IIH DLKPSN+ ++++ + DF
Sbjct: 135 NIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 189
Query: 437 GMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFT 489
G+A+ E +AT Y APE + D++S G ++ E T
Sbjct: 190 GLARHTDDE-----MXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 17/133 (12%)
Query: 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 424
LV E M GS+ ++ + ++ + ++ DVASAL++LH + I H DLKP N+L
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASV-VVQDVASALDFLH---NKGIAHRDLKPENIL 143
Query: 425 LDD-NMVA--HLSDFGMAKPL-LKEDQSLTQTQTLAT----IGYMAPE----YGREGQV- 471
+ N V+ + DF + + L D S T L T YMAPE + E +
Sbjct: 144 CEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIY 203
Query: 472 STNGDVYSFGIML 484
D++S G++L
Sbjct: 204 DKRCDLWSLGVIL 216
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 20/145 (13%)
Query: 363 KALVLEYMPHGSLEKCLY--SSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKP 420
K L++E+ P GSL L S+ Y L + L ++ DV + +L I+H ++KP
Sbjct: 84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKP 140
Query: 421 SNVLL----DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE-YGR-------E 468
N++ D V L+DFG A+ L ++Q + T Y+ P+ Y R +
Sbjct: 141 GNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX---LYGTEEYLHPDMYERAVLRKDHQ 197
Query: 469 GQVSTNGDVYSFGIMLMETFTRKKP 493
+ D++S G+ T P
Sbjct: 198 KKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMEPEVVTRYY 191
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLMETFTRK 491
APE N D++S G ++ E K
Sbjct: 192 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 461
+++LH S IIH DLKPSN+++ + + DFG+A+ + T + T Y
Sbjct: 137 IKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYYR 190
Query: 462 APEYGREGQVSTNGDVYSFGIMLME 486
APE N D++S G ++ E
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGE 215
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 405 LHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP--LLKEDQSLTQTQTLATIGYMA 462
L++ + I+H D+K +NVL+ + V L+DFG+A+ L K Q + T+ Y
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 463 PE-YGREGQVSTNGDVYSFGIMLMETFTR 490
PE E D++ G ++ E +TR
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 394 IMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMAKPLLKEDQSLT 450
IM V S YLH I+H DLKP N+LL+ + + + DFG++ +
Sbjct: 109 IMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGK 162
Query: 451 QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ L T Y+APE R+ + DV+S G++L
Sbjct: 163 MKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVIL 195
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 394 IMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMAKPLLKEDQSLT 450
IM V S YLH I+H DLKP N+LL+ + + + DFG++ +
Sbjct: 126 IMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGK 179
Query: 451 QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ L T Y+APE R+ + DV+S G++L
Sbjct: 180 MKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVIL 212
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 20/150 (13%)
Query: 360 DDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV-----ASALEYLHFGYSVPII 414
D + +V+EY+P +L +C NY I+I V ++ LH SV +
Sbjct: 98 DIYLNVVMEYVP-DTLHRC--CRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVC 153
Query: 415 HCDLKPSNVLLDD-NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE--YGREGQV 471
H D+KP NVL+++ + L DFG AK L + ++ + + Y APE +G +
Sbjct: 154 HRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA---YICSRYYRAPELIFGNQ-HY 209
Query: 472 STNGDVYSFGIMLMETFTRKKPTDEIFFGD 501
+T D++S G + E + IF GD
Sbjct: 210 TTAVDIWSVGCIFAEMML----GEPIFRGD 235
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMAKPLLKEDQSL 449
I+ V S + Y+H I+H DLKP N+LL+ + + DFG++ Q+
Sbjct: 125 RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNT 178
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ T Y+APE R G DV+S G++L
Sbjct: 179 KMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVIL 212
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 405 LHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP--LLKEDQSLTQTQTLATIGYMA 462
L++ + I+H D+K +NVL+ + V L+DFG+A+ L K Q + T+ Y
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 463 PE-YGREGQVSTNGDVYSFGIMLMETFTR 490
PE E D++ G ++ E +TR
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMAKPLLKEDQSL 449
I+ V S + Y+H I+H DLKP N+LL+ + + DFG++ Q+
Sbjct: 125 RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNT 178
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ T Y+APE R G DV+S G++L
Sbjct: 179 KMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVIL 212
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 50/120 (41%), Gaps = 15/120 (12%)
Query: 390 QRLNIMIDVASALEYLHF-GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS 448
Q L +++ + LE +H GY+ H DLKP+N+LL D L D G +
Sbjct: 135 QILWLLLGICRGLEAIHAKGYA----HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEG 190
Query: 449 LTQTQTL-------ATIGYMAPE---YGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIF 498
Q TL TI Y APE + DV+S G +L + P D +F
Sbjct: 191 SRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVF 250
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 405 LHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP--LLKEDQSLTQTQTLATIGYMA 462
L++ + I+H D+K +NVL+ + V L+DFG+A+ L K Q + T+ Y
Sbjct: 137 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 196
Query: 463 PE-YGREGQVSTNGDVYSFGIMLMETFTR 490
PE E D++ G ++ E +TR
Sbjct: 197 PELLLGERDYGPPIDLWGAGCIMAEMWTR 225
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + D G+A+ D +T
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLAR---HTDDEMT-------- 180
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 5 NGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLT 64
+ S+P G Q+L L DNQ+ P L L EL G N+L F +LT
Sbjct: 31 HASVP--AGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLT 88
Query: 65 NLRNLYLGSNKLTSIPSTLWNLKDILYLDLSSNFLLIGNLKVLVQVDLSMNNFSDVIPTT 124
L L LG+N+LT +PS +++ L L ++ + N ++ +P
Sbjct: 89 QLTVLDLGTNQLTVLPSAVFD-----------------RLVHLKELFMCCNKLTE-LPRG 130
Query: 125 IGGLKDLQYLFLEYNRLQGSIPDSIGD 151
I L L +L L+ N+L+ SIP D
Sbjct: 131 IERLTHLTHLALDQNQLK-SIPHGAFD 156
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 394 IMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMAKPLLKEDQSLT 450
I+ V S + Y+H I+H DLKP N+LL+ + + DFG++ Q+
Sbjct: 126 IIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTK 179
Query: 451 QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ T Y+APE R G DV+S G++L
Sbjct: 180 MKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVIL 212
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 84/212 (39%), Gaps = 19/212 (8%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G VAVK + R ++ +
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 130
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ E +AT
Sbjct: 131 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF-----VATR 182
Query: 459 GYMAPEYGREG-QVSTNGDVYSFGIMLMETFT 489
Y APE + D++S G ++ E T
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 26/171 (15%)
Query: 386 LDIFQRLN----------IMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLS- 434
LDIF+R+N I+ V E L F +S I H D++P N++ + +
Sbjct: 86 LDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKI 145
Query: 435 -DFGMAKPLLKEDQSLTQTQTLATI-GYMAPEYGREGQVSTNGDVYSFGIMLMETF---- 488
+FG A+ L D + L T Y APE + VST D++S G ++
Sbjct: 146 IEFGQARQLKPGDN----FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGIN 201
Query: 489 -----TRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTT 534
T ++ + I + T + I M+ VD L+ ++ T
Sbjct: 202 PFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTA 252
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 405 LHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP--LLKEDQSLTQTQTLATIGYMA 462
L++ + I+H D+K +NVL+ + V L+DFG+A+ L K Q + T+ Y
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 463 PE--YGREGQVSTNGDVYSFGIMLMETFTR 490
PE G E D++ G ++ E +TR
Sbjct: 198 PELLLG-ERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 84/212 (39%), Gaps = 19/212 (8%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G VAVK + R ++ +
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ E +AT
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF-----VATR 186
Query: 459 GYMAPEYGREG-QVSTNGDVYSFGIMLMETFT 489
Y APE + D++S G ++ E T
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + D G+A+ D +T
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLAR---HTDDEMT-------- 180
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 394 IMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 453
++ + L+Y+H S IIH DLKPSN+ ++++ + DFG+A+ E
Sbjct: 130 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF---- 182
Query: 454 TLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFT 489
+AT Y APE + D++S G ++ E T
Sbjct: 183 -VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 13/109 (11%)
Query: 386 LDIFQR----LNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN--MVAHLSDFGMA 439
LD QR NIM + SAL YLH + I H D+KP N L N L DFG++
Sbjct: 161 LDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLS 217
Query: 440 KPLLK--EDQSLTQTQTLATIGYMAPEYGREGQVS--TNGDVYSFGIML 484
K K + T T ++APE S D +S G++L
Sbjct: 218 KEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 30/133 (22%)
Query: 360 DDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLK 419
D +V+EY+ SL++ S L + + + ++++ AL YLH S+ +++ DLK
Sbjct: 156 DPVGYIVMEYVGGQSLKR---SKGQKLPVAEAIAYLLEILPALSYLH---SIGLVYNDLK 209
Query: 420 PSNVLL--------DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQV 471
P N++L D V+ ++ FG T G+ APE R G
Sbjct: 210 PENIMLTEEQLKLIDLGAVSRINSFGY---------------LYGTPGFQAPEIVRTGPT 254
Query: 472 STNGDVYSFGIML 484
D+Y+ G L
Sbjct: 255 VAT-DIYTVGRTL 266
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 78/199 (39%), Gaps = 10/199 (5%)
Query: 299 LIGRGGFGSVYKARIQDGMEV-AVKVFD---LQYGRAFKSFDIECDMXXXXXXXXXXXXX 354
+G+GGF ++ D EV A K+ L + +E +
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 355 XXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 414
+DF +VLE SL + L+ L + + + +YLH +I
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 163
Query: 415 HCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTN 474
H DLK N+ L++++ + DFG+A + E + T Y+APE + S
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCGTPNYIAPEVLSKKGHSFE 221
Query: 475 GDVYSFGIMLMETFTRKKP 493
DV+S G ++ K P
Sbjct: 222 VDVWSIGCIMYTLLVGKPP 240
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 16/104 (15%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
A++YLH IIH DLKP NVLL +++ + ++DFG +K L + SL +T T
Sbjct: 265 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRT-LCGT 318
Query: 458 IGYMAPEYGREGQVSTNG-----DVYSFGIMLMETFTRKKPTDE 496
Y+APE V T G D +S G++L + P E
Sbjct: 319 PTYLAPEVL--VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 360
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 78/199 (39%), Gaps = 10/199 (5%)
Query: 299 LIGRGGFGSVYKARIQDGMEV-AVKVFD---LQYGRAFKSFDIECDMXXXXXXXXXXXXX 354
+G+GGF ++ D EV A K+ L + +E +
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 355 XXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 414
+DF +VLE SL + L+ L + + + +YLH +I
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 161
Query: 415 HCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTN 474
H DLK N+ L++++ + DFG+A + E + T Y+APE + S
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCGTPNYIAPEVLSKKGHSFE 219
Query: 475 GDVYSFGIMLMETFTRKKP 493
DV+S G ++ K P
Sbjct: 220 VDVWSIGCIMYTLLVGKPP 238
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 16/104 (15%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
A++YLH IIH DLKP NVLL +++ + ++DFG +K L + SL +T T
Sbjct: 251 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRT-LCGT 304
Query: 458 IGYMAPEYGREGQVSTNG-----DVYSFGIMLMETFTRKKPTDE 496
Y+APE V T G D +S G++L + P E
Sbjct: 305 PTYLAPEVL--VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 346
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 460
+++LH S IIH DLKPSN+++ + + DFG+A+ S + T Y
Sbjct: 140 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMVPFVVTRYY 193
Query: 461 MAPEYGREGQVSTNGDVYSFGIMLME 486
APE N D++S G ++ E
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGE 219
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G+ VAVK + R ++ +
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + D G+A+ D +T
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLAR---HTDDEMT-------- 180
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 16/104 (15%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
A++YLH IIH DLKP NVLL +++ + ++DFG +K L + SL +T T
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRT-LCGT 179
Query: 458 IGYMAPEYGREGQVSTNG-----DVYSFGIMLMETFTRKKPTDE 496
Y+APE V T G D +S G++L + P E
Sbjct: 180 PTYLAPEVLV--SVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 16/92 (17%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
A++YLH IIH DLKP NVLL +++ + ++DFG +K L + SL +T T
Sbjct: 125 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRT-LCGT 178
Query: 458 IGYMAPEYGREGQVSTNG-----DVYSFGIML 484
Y+APE V T G D +S G++L
Sbjct: 179 PTYLAPEVLV--SVGTAGYNRAVDCWSLGVIL 208
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 16/104 (15%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
A++YLH IIH DLKP NVLL +++ + ++DFG +K L + SL +T T
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRT-LCGT 179
Query: 458 IGYMAPEYGREGQVSTNG-----DVYSFGIMLMETFTRKKPTDE 496
Y+APE V T G D +S G++L + P E
Sbjct: 180 PTYLAPEVLV--SVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 16/92 (17%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
A++YLH IIH DLKP NVLL +++ + ++DFG +K L + SL +T T
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRT-LCGT 179
Query: 458 IGYMAPEYGREGQVSTNG-----DVYSFGIML 484
Y+APE V T G D +S G++L
Sbjct: 180 PTYLAPEVLV--SVGTAGYNRAVDCWSLGVIL 209
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 29/135 (21%)
Query: 389 FQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD-------------DNMVAHLSD 435
+ ++++ +AS + +LH S+ IIH DLKP N+L+ +N+ +SD
Sbjct: 115 YNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171
Query: 436 FGMAKPLLKEDQSLTQ--TQTLATIGYMAPEYGREG-------QVSTNGDVYSFGIMLME 486
FG+ K L S T G+ APE E +++ + D++S G +
Sbjct: 172 FGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYY 231
Query: 487 TFTRKKPTDEIFFGD 501
++ K FGD
Sbjct: 232 ILSKGKHP----FGD 242
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 81/203 (39%), Gaps = 17/203 (8%)
Query: 300 IGRGGFGSVYKAR-IQDGMEVAVKVFDLQY--GRAFKSFDIECDMXXXXXXXXXXXXXXX 356
IG+G F V AR I G EVAVK+ D + + E +
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 357 XXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 416
+ LV EY G + L + + R + SA++Y H + I+H
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 417 DLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG---YMAPE-YGREGQVS 472
DLK N+LLD + ++DFG + ++ + A G Y APE + +
Sbjct: 138 DLKAENLLLDADXNIKIADFGFS------NEFTFGNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 473 TNGDVYSFGIMLMETFTRKKPTD 495
DV+S G++L + P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 16/104 (15%)
Query: 401 ALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 457
A++YLH IIH DLKP NVLL +++ + ++DFG +K L + SL +T T
Sbjct: 132 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRT-LCGT 185
Query: 458 IGYMAPEYGREGQVSTNG-----DVYSFGIMLMETFTRKKPTDE 496
Y+APE V T G D +S G++L + P E
Sbjct: 186 PTYLAPEVLV--SVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 227
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 78/199 (39%), Gaps = 10/199 (5%)
Query: 299 LIGRGGFGSVYKARIQDGMEV-AVKVFD---LQYGRAFKSFDIECDMXXXXXXXXXXXXX 354
+G+GGF ++ D EV A K+ L + +E +
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 355 XXXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 414
+DF +VLE SL + L+ L + + + +YLH +I
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 137
Query: 415 HCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTN 474
H DLK N+ L++++ + DFG+A + E + T Y+APE + S
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCGTPNYIAPEVLSKKGHSFE 195
Query: 475 GDVYSFGIMLMETFTRKKP 493
DV+S G ++ K P
Sbjct: 196 VDVWSIGCIMYTLLVGKPP 214
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 30/159 (18%)
Query: 14 KLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGS 73
L+ L++L L N + LA L L+ N+L F L+ L+ L+L +
Sbjct: 86 HLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRN 145
Query: 74 NKLTSIPSTLWN--------------------------LKDILYLDLS-SNFLLIGNLKV 106
N + SIPS +N L ++ YL+L+ N I NL
Sbjct: 146 NPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTP 205
Query: 107 LV---QVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQ 142
L+ ++DLS N+ S + P + GL LQ L++ +++Q
Sbjct: 206 LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ 244
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 19/129 (14%)
Query: 11 AVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLY 70
A L L+ L+L L IP+ L L L ELD GN L P F L +L+ L+
Sbjct: 180 AFEGLSNLRYLNLAMCNLR-EIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLW 237
Query: 71 LGSNKLTSIPSTLWNLKDILYLDLSSNFLLIGNLKVLVQVDLSMNNFSDVIPTTIGGLKD 130
+ +++ I ++ NL+ LV+++L+ NN + + L
Sbjct: 238 MIQSQIQVIERNAFD-----------------NLQSLVEINLAHNNLTLLPHDLFTPLHH 280
Query: 131 LQYLFLEYN 139
L+ + L +N
Sbjct: 281 LERIHLHHN 289
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 19 QLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTS 78
Q+L L DN++ P RL L LD N+L F LT L L L N+L S
Sbjct: 33 QVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKS 92
Query: 79 IPSTLW-NLKDILYLDLSSN 97
IP + NL+ + ++ L +N
Sbjct: 93 IPRGAFDNLRSLTHIWLLNN 112
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 25/131 (19%)
Query: 389 FQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD-------------DNMVAHLSD 435
+ ++++ +AS + +LH S+ IIH DLKP N+L+ +N+ +SD
Sbjct: 133 YNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 189
Query: 436 FGMAKPLLKEDQSLTQ--TQTLATIGYMAPEYGREG---QVSTNGDVYSFGIMLMETFTR 490
FG+ K L T G+ APE E +++ + D++S G + ++
Sbjct: 190 FGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSK 249
Query: 491 KKPTDEIFFGD 501
K FGD
Sbjct: 250 GKHP----FGD 256
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 25/131 (19%)
Query: 389 FQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD-------------DNMVAHLSD 435
+ ++++ +AS + +LH S+ IIH DLKP N+L+ +N+ +SD
Sbjct: 133 YNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 189
Query: 436 FGMAKPLLKEDQSLTQ--TQTLATIGYMAPEYGREG---QVSTNGDVYSFGIMLMETFTR 490
FG+ K L T G+ APE E +++ + D++S G + ++
Sbjct: 190 FGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSK 249
Query: 491 KKPTDEIFFGD 501
K FGD
Sbjct: 250 GKHP----FGD 256
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
Query: 63 LTNLRNLYLGSNKLTSIPSTLWNLKDILYLDLSSN---------FLLIGNLKVLVQVDLS 113
L N+R L LG NKL I S L L ++ YL L+ N F + NLK LV V+
Sbjct: 62 LPNVRYLALGGNKLHDI-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQ 120
Query: 114 MNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDXXXXXXXXXXXXXXXGTIPISL 173
+ + D + L +L YL+L +N+LQ S+P + D ++P +
Sbjct: 121 LQSLPDGV---FDKLTNLTYLYLYHNQLQ-SLPKGVFDKLTNLTRLDLDNNQLQSLPEGV 176
Query: 174 -EKLLDLKDINVSFNKLEG 191
+KL LK ++++ N+L+
Sbjct: 177 FDKLTQLKQLSLNDNQLKS 195
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 9/134 (6%)
Query: 11 AVGKLQKLQLLSLEDNQLEGSIPDDLC-RLAALFELDSGGNKLDGFVPACFGNLTNLRNL 69
A+ +L L L L NQL+ S+P+ + +L L EL N+L F LTNL L
Sbjct: 80 ALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYL 138
Query: 70 YLGSNKLTSIPSTLWN-LKDILYLDLSSNFL------LIGNLKVLVQVDLSMNNFSDVIP 122
YL N+L S+P +++ L ++ LDL +N L + L L Q+ L+ N V
Sbjct: 139 YLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKSVPD 198
Query: 123 TTIGGLKDLQYLFL 136
L L +++L
Sbjct: 199 GVFDRLTSLTHIWL 212
Score = 35.4 bits (80), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 7 SIPIAV-GKLQKLQLLSLEDNQLEGSIPDDLC-RLAALFELDSGGNKLDGFVPACFGNLT 64
S+P V KL L L L NQL+ S+P + +L L LD N+L F LT
Sbjct: 123 SLPDGVFDKLTNLTYLYLYHNQLQ-SLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLT 181
Query: 65 NLRNLYLGSNKLTSIP 80
L+ L L N+L S+P
Sbjct: 182 QLKQLSLNDNQLKSVP 197
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 1 GNNLNGSIPIAV-GKLQKLQLLSLEDNQLEGSIPDDLC-RLAALFELDSGGNKLDGFVPA 58
GN L S+P V KL L+ L L +NQL+ S+PD + +L L L N+L
Sbjct: 94 GNQLQ-SLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLYLYHNQLQSLPKG 151
Query: 59 CFGNLTNLRNLYLGSNKLTSIP 80
F LTNL L L +N+L S+P
Sbjct: 152 VFDKLTNLTRLDLDNNQLQSLP 173
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 59/129 (45%), Gaps = 20/129 (15%)
Query: 364 ALVLEYMPHGSL-EKCLYSSNYILD----IFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
A+++EY G L E+ + + D FQ+L S + Y H S+ I H DL
Sbjct: 92 AIIMEYASGGELYERICNAGRFSEDEARFFFQQL------LSGVSYCH---SMQICHRDL 142
Query: 419 KPSNVLLDDNMVAHLS--DFGMAKPLLKEDQSLTQTQTLATIGYMAPEY-GREGQVSTNG 475
K N LLD + L DFG +K + Q + T+ T Y+APE R+
Sbjct: 143 KLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---TVGTPAYIAPEVLLRQEYDGKIA 199
Query: 476 DVYSFGIML 484
DV+S G+ L
Sbjct: 200 DVWSCGVTL 208
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 12/199 (6%)
Query: 300 IGRGGFGSVYKARIQDGMEVA----VKVFDLQYGRAFKSFDIECDMXXXXXXXXXXXXXX 355
IG G +G+V+KA+ ++ E+ V++ D G + C +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREIC-LLKELKHKNIVRLHD 68
Query: 356 XXXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIH 415
D LV E+ L+K S N LD + + + L + H S ++H
Sbjct: 69 VLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLH 124
Query: 416 CDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQV-STN 474
DLKP N+L++ N L++FG+A+ + + + T+ Y P+ ++ ST+
Sbjct: 125 RDLKPQNLLINRNGELKLANFGLARAFGIPVRCY--SAEVVTLWYRPPDVLFGAKLYSTS 182
Query: 475 GDVYSFGIMLMETFTRKKP 493
D++S G + E +P
Sbjct: 183 IDMWSAGCIFAELANAGRP 201
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 11/194 (5%)
Query: 300 IGRGGFGSVYK--ARIQDGMEVAVKVFDLQYGRAFKSFDI-ECDMXXXXXXXXXXXXXXX 356
+G G + +VYK +++ D + VA+K L++ I E +
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 357 XXXDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 416
+ LV EY+ L++ L I+++ + + L Y H ++H
Sbjct: 69 IHTEKSLTLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHR 124
Query: 417 DLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE-YGREGQVSTNG 475
DLKP N+L+++ L+DFG+A+ K + T + T+ Y P+ ST
Sbjct: 125 DLKPQNLLINERGELKLADFGLARA--KSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQI 182
Query: 476 DVYSFGIMLMETFT 489
D++ G + E T
Sbjct: 183 DMWGVGCIFYEMAT 196
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 86/218 (39%), Gaps = 31/218 (14%)
Query: 287 IFQATNGFSENNLIGRGGFGSVYKA-RIQDGMEVAVKVFD------LQYGRAFKSFDIEC 339
I++ + + +G G +GSV A + G VAVK + R ++ +
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 340 DMXXXXXXXXXXXXXXXXXXDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 398
M ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 399 ASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
L+Y+H S IIH DLKPSN+ ++++ + DF +A+ D +T
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLAR---HTDDEMT-------- 180
Query: 459 GYMAPEYGREGQVSTNG-------DVYSFGIMLMETFT 489
GY+A + R ++ N D++S G ++ E T
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
ALV EY+ + K LY IL F M ++ AL+Y H S I+H D+KP NV
Sbjct: 116 ALVFEYINNTDF-KQLYQ---ILTDFDIRFYMYELLKALDYCH---SKGIMHRDVKPHNV 168
Query: 424 LLDDNMVA-HLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG-DVYSFG 481
++D L D+G+A+ + + +A+ + PE + Q+ D++S G
Sbjct: 169 MIDHQQKKLRLIDWGLAEFYHPAQEYNVR---VASRYFKGPELLVDYQMYDYSLDMWSLG 225
Query: 482 IMLMETFTRKKP 493
ML R++P
Sbjct: 226 CMLASMIFRREP 237
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
ALV E++ + K LY + DI R M ++ AL+Y H S+ I+H D+KP NV
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI--RF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 424 LLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG-DVYSFG 481
L+D ++ L D+G+A+ Q +A+ + PE + Q+ D++S G
Sbjct: 163 LIDHEHRKLRLIDWGLAE-FYHPGQEY--NVRVASRYFKGPELLVDYQMYDYSLDMWSLG 219
Query: 482 IMLMETFTRKKP 493
ML RK+P
Sbjct: 220 CMLASMIFRKEP 231
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
ALV EY+ + K LY IL F M ++ AL+Y H S I+H D+KP NV
Sbjct: 111 ALVFEYINNTDF-KQLYQ---ILTDFDIRFYMYELLKALDYCH---SKGIMHRDVKPHNV 163
Query: 424 LLDDNMVA-HLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG-DVYSFG 481
++D L D+G+A+ + + +A+ + PE + Q+ D++S G
Sbjct: 164 MIDHQQKKLRLIDWGLAEFYHPAQEYNVR---VASRYFKGPELLVDYQMYDYSLDMWSLG 220
Query: 482 IMLMETFTRKKP 493
ML R++P
Sbjct: 221 CMLASMIFRREP 232
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 81/197 (41%), Gaps = 16/197 (8%)
Query: 294 FSENNLIGRGGFGSVYKARIQDGMEV--AVKVFDLQYGRAFKSFDIECDMXXXXXXXXXX 351
++ N IGRG +G V K +Q G + A K + F E ++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 352 XXXXXXXXDDFKALVLEYMPHGSL-EKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
+ LV+E G L E+ ++ + R IM DV SA+ Y H
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR--IMKDVLSAVAYCH---K 124
Query: 411 VPIIHCDLKPSNVL-LDDNMVAHLS--DFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
+ + H DLKP N L L D+ + L DFG+A T+ + T Y++P+
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---VGTPYYVSPQV-L 180
Query: 468 EGQVSTNGDVYSFGIML 484
EG D +S G+M+
Sbjct: 181 EGLYGPECDEWSAGVMM 197
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 1 GNNLNGSIPIAV-GKLQKLQLLSLEDNQLEGSIPDDLC-RLAALFELDSGGNKLDGFVPA 58
NN S+P+ V L +L L L NQL+ S+P + RL L EL N+L
Sbjct: 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAG 149
Query: 59 CFGNLTNLRNLYLGSNKLTSIP 80
F LTNL+ L L +N+L S+P
Sbjct: 150 AFDKLTNLQTLSLSTNQLQSVP 171
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 15 LQKLQLLSLEDNQLEGSIP----DDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLY 70
L +L L L +NQL S+P D L +L L+ GGN+L F LT L+ L
Sbjct: 82 LTELGTLGLANNQL-ASLPLGVFDHLTQLDKLY---LGGNQLKSLPSGVFDRLTKLKELR 137
Query: 71 LGSNKLTSIPSTLWN-LKDILYLDLSSNFL 99
L +N+L SIP+ ++ L ++ L LS+N L
Sbjct: 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQL 167
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 62/148 (41%), Gaps = 18/148 (12%)
Query: 8 IPIAVGKL--QKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTN 65
IP KL Q L +L D G L L L+ N+L F +LT
Sbjct: 33 IPADTEKLDLQSTGLATLSDATFRG--------LTKLTWLNLDYNQLQTLSAGVFDDLTE 84
Query: 66 LRNLYLGSNKLTSIPSTLWN-LKDILYLDLSSNFL------LIGNLKVLVQVDLSMNNFS 118
L L L +N+L S+P +++ L + L L N L + L L ++ L+ N
Sbjct: 85 LGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ 144
Query: 119 DVIPTTIGGLKDLQYLFLEYNRLQGSIP 146
+ L +LQ L L N+LQ S+P
Sbjct: 145 SIPAGAFDKLTNLQTLSLSTNQLQ-SVP 171
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 60/133 (45%), Gaps = 28/133 (21%)
Query: 39 LAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTLWNLKDI--LYL--DL 94
L L L+ GN++ P NL L NLY+G+NK+T I S L NL ++ LYL D
Sbjct: 65 LTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI-SALQNLTNLRELYLNEDN 121
Query: 95 SSNFLLIGNLKVLVQVDLSMN-NFSDVIP--------------------TTIGGLKDLQY 133
S+ + NL ++L N N SD+ P T I L DL
Sbjct: 122 ISDISPLANLTKXYSLNLGANHNLSDLSPLSNXTGLNYLTVTESKVKDVTPIANLTDLYS 181
Query: 134 LFLEYNRLQGSIP 146
L L YN+++ P
Sbjct: 182 LSLNYNQIEDISP 194
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 33/159 (20%)
Query: 9 PIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRN 68
PIA L L LSL NQ+E P L L +L + N++ P N T L +
Sbjct: 172 PIA--NLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITPVA--NXTRLNS 225
Query: 69 LYLGSNKLTSIPSTLWNLKDILYLDLSSNFL----LIGNLKVLVQVDLSMNNFSDVI--- 121
L +G+NK+T + S L NL + +L++ +N + + +L L +++ N SD+
Sbjct: 226 LKIGNNKITDL-SPLANLSQLTWLEIGTNQISDINAVKDLTKLKXLNVGSNQISDISVLN 284
Query: 122 -------------------PTTIGGLKDLQYLFLEYNRL 141
IGGL +L LFL N +
Sbjct: 285 NLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHI 323
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 11 AVGKLQKLQLLSLEDNQLEG-SIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNL 69
AV L KL+ L++ NQ+ S+ ++L +L +LF N+L G LTNL L
Sbjct: 260 AVKDLTKLKXLNVGSNQISDISVLNNLSQLNSLFL---NNNQLGNEDXEVIGGLTNLTTL 316
Query: 70 YLGSNKLTSI 79
+L N +T I
Sbjct: 317 FLSQNHITDI 326
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 16 QKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNK 75
+ L L L+ N+++ +DL R + L+ L G N++ L LR L+L +NK
Sbjct: 193 ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNK 252
Query: 76 LTSIPSTLWNLKDILYLDLSSN 97
L+ +P+ L +LK + + L +N
Sbjct: 253 LSRVPAGLPDLKLLQVVYLHTN 274
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 28/64 (43%)
Query: 20 LLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSI 79
LL L++N + DD L L+ L NK+ F L L+ LY+ N L I
Sbjct: 58 LLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEI 117
Query: 80 PSTL 83
P L
Sbjct: 118 PPNL 121
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 1 GNNLNGSIPIAV-GKLQKLQLLSLEDNQLEGSIPDDLC-RLAALFELDSGGNKLDGFVPA 58
NN S+P+ V L +L L L NQL+ S+P + RL L EL N+L
Sbjct: 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAG 149
Query: 59 CFGNLTNLRNLYLGSNKLTSIP 80
F LTNL+ L L +N+L S+P
Sbjct: 150 AFDKLTNLQTLSLSTNQLQSVP 171
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 15 LQKLQLLSLEDNQLEGSIP----DDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLY 70
L +L L L +NQL S+P D L +L L+ GGN+L F LT L+ L
Sbjct: 82 LTELGTLGLANNQL-ASLPLGVFDHLTQLDKLY---LGGNQLKSLPSGVFDRLTKLKELR 137
Query: 71 LGSNKLTSIPSTLWN-LKDILYLDLSSNFL 99
L +N+L SIP+ ++ L ++ L LS+N L
Sbjct: 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQL 167
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 62/148 (41%), Gaps = 18/148 (12%)
Query: 8 IPIAVGKL--QKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTN 65
IP KL Q L +L D G L L L+ N+L F +LT
Sbjct: 33 IPADTEKLDLQSTGLATLSDATFRG--------LTKLTWLNLDYNQLQTLSAGVFDDLTE 84
Query: 66 LRNLYLGSNKLTSIPSTLWN-LKDILYLDLSSNFL------LIGNLKVLVQVDLSMNNFS 118
L L L +N+L S+P +++ L + L L N L + L L ++ L+ N
Sbjct: 85 LGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ 144
Query: 119 DVIPTTIGGLKDLQYLFLEYNRLQGSIP 146
+ L +LQ L L N+LQ S+P
Sbjct: 145 SIPAGAFDKLTNLQTLSLSTNQLQ-SVP 171
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 81/197 (41%), Gaps = 16/197 (8%)
Query: 294 FSENNLIGRGGFGSVYKARIQDGMEV--AVKVFDLQYGRAFKSFDIECDMXXXXXXXXXX 351
++ N IGRG +G V K +Q G + A K + F E ++
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 352 XXXXXXXXDDFKALVLEYMPHGSL-EKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
+ LV+E G L E+ ++ + R IM DV SA+ Y H
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR--IMKDVLSAVAYCH---K 141
Query: 411 VPIIHCDLKPSNVL-LDDNMVAHLS--DFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467
+ + H DLKP N L L D+ + L DFG+A T+ + T Y++P+
Sbjct: 142 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---VGTPYYVSPQV-L 197
Query: 468 EGQVSTNGDVYSFGIML 484
EG D +S G+M+
Sbjct: 198 EGLYGPECDEWSAGVMM 214
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMAKPLLKEDQSL 449
I+ V S + Y+H I+H DLKP N+LL+ + + DFG++ + S
Sbjct: 136 RIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASK 189
Query: 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIML 484
+ T Y+APE G DV+S G++L
Sbjct: 190 KMKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVIL 223
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNM---VAHLSDFGMAKPLLKEDQSLTQTQTLATI 458
LE + + + ++H +LKP N+LL + L+DFG+A + E Q+ T
Sbjct: 120 LEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTP 177
Query: 459 GYMAPEYGREGQVSTNGDVYSFGIML 484
GY++PE R+ D+++ G++L
Sbjct: 178 GYLSPEVLRKDPYGKPVDLWACGVIL 203
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQ 453
M ++ AL+Y H S+ I+H D+KP NV++D ++ L D+G+A+ Q
Sbjct: 137 MYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEY--NV 190
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKP 493
+A+ + PE + Q+ D++S G ML RK+P
Sbjct: 191 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 26/132 (19%)
Query: 364 ALVLEYMPHGSL-EKCLYSSNYILD----IFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
A+V+EY G L E+ + + D FQ+L S + Y H ++ + H DL
Sbjct: 91 AIVMEYASGGELFERICNAGRFSEDEARFFFQQL------ISGVSYCH---AMQVCHRDL 141
Query: 419 KPSNVLLDDNMVAHLS--DFGMAKPLLKEDQSLTQTQTLATIGYMAPEY----GREGQVS 472
K N LLD + L DFG +K + Q + T+ T Y+APE +G+V+
Sbjct: 142 KLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---TVGTPAYIAPEVLLKKEYDGKVA 198
Query: 473 TNGDVYSFGIML 484
DV+S G+ L
Sbjct: 199 ---DVWSCGVTL 207
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 84/205 (40%), Gaps = 27/205 (13%)
Query: 300 IGRGGFGSVYKA-RIQDGMEVAVKVF------DLQYGRAFKSFDIECDMXXXXXXXXXXX 352
+G G +G+V A + G +VA+K +L RA++ + M
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 353 XXXXXXXDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 410
DDF LV+ +M L K + D Q L + + L Y+H +
Sbjct: 93 FTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFL--VYQMLKGLRYIH---A 146
Query: 411 VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPE----YG 466
IIH DLKP N+ ++++ + DFG+A+ E + T Y APE +
Sbjct: 147 AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE-----MXGXVVTRWYRAPEVILNWM 201
Query: 467 REGQVSTNGDVYSFGIMLMETFTRK 491
R Q D++S G ++ E T K
Sbjct: 202 RYTQTV---DIWSVGCIMAEMITGK 223
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 389 FQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS 448
F I V L+ L + +S ++H DLKP N+ ++++ + DFG+A+ E
Sbjct: 123 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--- 179
Query: 449 LTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRK 491
T + T Y APE + D++S G ++ E T K
Sbjct: 180 --MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 393 NIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMAK 440
IM + A++YLH S+ I H D+KP N+L N + L+DFG AK
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
ALV E++ + K LY + DI R M ++ AL+Y H S+ I+H D+KP NV
Sbjct: 109 ALVFEHVNNTDF-KQLYQTLTDYDI--RF-YMYEILKALDYCH---SMGIMHRDVKPHNV 161
Query: 424 LLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG-DVYSFG 481
++D ++ L D+G+A+ Q +A+ + PE + Q+ D++S G
Sbjct: 162 MIDHEHRKLRLIDWGLAE-FYHPGQEY--NVRVASRYFKGPELLVDYQMYDYSLDMWSLG 218
Query: 482 IMLMETFTRKKP 493
ML RK+P
Sbjct: 219 CMLASMIFRKEP 230
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
ALV E++ + K LY + DI R M ++ AL+Y H S+ I+H D+KP NV
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI--RF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 424 LLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG-DVYSFG 481
++D ++ L D+G+A+ Q +A+ + PE + Q+ D++S G
Sbjct: 163 MIDHEHRKLRLIDWGLAE-FYHPGQEY--NVRVASRYFKGPELLVDYQMYDYSLDMWSLG 219
Query: 482 IMLMETFTRKKP 493
ML RK+P
Sbjct: 220 CMLASMIFRKEP 231
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
ALV E++ + K LY + DI R M ++ AL+Y H S+ I+H D+KP NV
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI--RF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 424 LLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG-DVYSFG 481
++D ++ L D+G+A+ Q +A+ + PE + Q+ D++S G
Sbjct: 163 MIDHEHRKLRLIDWGLAE-FYHPGQEY--NVRVASRYFKGPELLVDYQMYDYSLDMWSLG 219
Query: 482 IMLMETFTRKKP 493
ML RK+P
Sbjct: 220 CMLASMIFRKEP 231
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 395 MIDVASALEYLHFGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQ 453
M ++ AL+Y H S+ I+H D+KP NV++D ++ L D+G+A+ Q
Sbjct: 137 MYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEY--NV 190
Query: 454 TLATIGYMAPEYGREGQVSTNG-DVYSFGIMLMETFTRKKP 493
+A+ + PE + Q+ D++S G ML RK+P
Sbjct: 191 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 26/132 (19%)
Query: 364 ALVLEYMPHGSL-EKCLYSSNYILD----IFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418
A+V+EY G L E+ + + D FQ+L S + Y H ++ + H DL
Sbjct: 90 AIVMEYASGGELFERICNAGRFSEDEARFFFQQL------ISGVSYCH---AMQVCHRDL 140
Query: 419 KPSNVLLDDNMVAHLS--DFGMAKPLLKEDQSLTQTQTLATIGYMAPEY----GREGQVS 472
K N LLD + L DFG +K + Q + T+ T Y+APE +G+V+
Sbjct: 141 KLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---TVGTPAYIAPEVLLKKEYDGKVA 197
Query: 473 TNGDVYSFGIML 484
DV+S G+ L
Sbjct: 198 ---DVWSCGVTL 206
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
ALV E++ + K LY + DI R M ++ AL+Y H S+ I+H D+KP NV
Sbjct: 108 ALVFEHVNNTDF-KQLYQTLTDYDI--RF-YMYEILKALDYCH---SMGIMHRDVKPHNV 160
Query: 424 LLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG-DVYSFG 481
++D ++ L D+G+A+ Q +A+ + PE + Q+ D++S G
Sbjct: 161 MIDHEHRKLRLIDWGLAE-FYHPGQEY--NVRVASRYFKGPELLVDYQMYDYSLDMWSLG 217
Query: 482 IMLMETFTRKKP 493
ML RK+P
Sbjct: 218 CMLASMIFRKEP 229
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
ALV E++ + K LY + DI R M ++ AL+Y H S+ I+H D+KP NV
Sbjct: 109 ALVFEHVNNTDF-KQLYQTLTDYDI--RF-YMYEILKALDYCH---SMGIMHRDVKPHNV 161
Query: 424 LLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG-DVYSFG 481
++D ++ L D+G+A+ Q +A+ + PE + Q+ D++S G
Sbjct: 162 MIDHEHRKLRLIDWGLAE-FYHPGQEY--NVRVASRYFKGPELLVDYQMYDYSLDMWSLG 218
Query: 482 IMLMETFTRKKP 493
ML RK+P
Sbjct: 219 CMLASMIFRKEP 230
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
ALV E++ + K LY + DI R M ++ AL+Y H S+ I+H D+KP NV
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI--RF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 424 LLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG-DVYSFG 481
++D ++ L D+G+A+ Q +A+ + PE + Q+ D++S G
Sbjct: 163 MIDHEHRKLRLIDWGLAE-FYHPGQEY--NVRVASRYFKGPELLVDYQMYDYSLDMWSLG 219
Query: 482 IMLMETFTRKKP 493
ML RK+P
Sbjct: 220 CMLASMIFRKEP 231
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 389 FQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS 448
F I V L+ L + +S ++H DLKP N+ ++++ + DFG+A+ E
Sbjct: 141 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--- 197
Query: 449 LTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRK 491
T + T Y APE + D++S G ++ E T K
Sbjct: 198 --MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
ALV E++ + K LY + DI R M ++ AL+Y H S+ I+H D+KP NV
Sbjct: 115 ALVFEHVNNTDF-KQLYQTLTDYDI--RF-YMYEILKALDYCH---SMGIMHRDVKPHNV 167
Query: 424 LLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG-DVYSFG 481
++D ++ L D+G+A+ Q +A+ + PE + Q+ D++S G
Sbjct: 168 MIDHEHRKLRLIDWGLAE-FYHPGQEY--NVRVASRYFKGPELLVDYQMYDYSLDMWSLG 224
Query: 482 IMLMETFTRKKP 493
ML RK+P
Sbjct: 225 CMLASMIFRKEP 236
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
ALV E++ + K LY + DI R M ++ AL+Y H S+ I+H D+KP NV
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI--RF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 424 LLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG-DVYSFG 481
++D ++ L D+G+A+ Q +A+ + PE + Q+ D++S G
Sbjct: 163 MIDHEHRKLRLIDWGLAE-FYHPGQEY--NVRVASRYFKGPELLVDYQMYDYSLDMWSLG 219
Query: 482 IMLMETFTRKKP 493
ML RK+P
Sbjct: 220 CMLASMIFRKEP 231
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNV 423
ALV E++ + K LY + DI R M ++ AL+Y H S+ I+H D+KP NV
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI--RF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 424 LLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNG-DVYSFG 481
++D ++ L D+G+A+ Q +A+ + PE + Q+ D++S G
Sbjct: 163 MIDHEHRKLRLIDWGLAE-FYHPGQEY--NVRVASRYFKGPELLVDYQMYDYSLDMWSLG 219
Query: 482 IMLMETFTRKKP 493
ML RK+P
Sbjct: 220 CMLASMIFRKEP 231
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 65 NLRNLYLGSNKLTSIPSTLWNLKDILYLDLSSNFL------LIGNLKVLVQVDLSMNNFS 118
++ LYL N+ T +P L N K + +DLS+N + N+ L+ + LS N
Sbjct: 32 DVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 91
Query: 119 DVIPTTIGGLKDLQYLFLEYN 139
+ P T GLK L+ L L N
Sbjct: 92 CIPPRTFDGLKSLRLLSLHGN 112
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.140 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,138,780
Number of Sequences: 62578
Number of extensions: 662902
Number of successful extensions: 3698
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 345
Number of HSP's that attempted gapping in prelim test: 1538
Number of HSP's gapped (non-prelim): 1673
length of query: 580
length of database: 14,973,337
effective HSP length: 104
effective length of query: 476
effective length of database: 8,465,225
effective search space: 4029447100
effective search space used: 4029447100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)