Query 038098
Match_columns 580
No_of_seqs 498 out of 4560
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 12:41:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038098.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038098hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 1.7E-57 5.7E-62 446.4 17.4 259 292-573 13-290 (299)
2 4aoj_A High affinity nerve gro 100.0 6E-57 2.1E-61 448.6 20.8 258 292-572 41-319 (329)
3 3omv_A RAF proto-oncogene seri 100.0 8.2E-57 2.8E-61 441.3 19.7 263 292-575 36-303 (307)
4 4gt4_A Tyrosine-protein kinase 100.0 7.8E-57 2.7E-61 443.6 18.4 255 293-570 27-304 (308)
5 4fih_A Serine/threonine-protei 100.0 3.8E-55 1.3E-59 434.7 20.6 250 292-566 74-324 (346)
6 4b9d_A Serine/threonine-protei 100.0 7.6E-55 2.6E-59 433.2 17.2 250 292-566 24-277 (350)
7 4g3f_A NF-kappa-beta-inducing 100.0 1.9E-54 6.5E-59 428.5 19.7 257 292-575 58-319 (336)
8 3hmm_A TGF-beta receptor type- 100.0 1.9E-54 6.5E-59 427.8 18.3 277 292-573 3-298 (303)
9 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.2E-54 3.9E-59 424.8 16.2 250 292-566 32-285 (311)
10 4ase_A Vascular endothelial gr 100.0 3E-54 1E-58 432.6 18.9 265 287-573 59-348 (353)
11 4fie_A Serine/threonine-protei 100.0 7.5E-54 2.6E-58 435.8 21.3 250 292-566 151-401 (423)
12 3fpq_A Serine/threonine-protei 100.0 3.9E-53 1.3E-57 412.2 20.8 245 295-566 29-283 (290)
13 3hyh_A Carbon catabolite-derep 100.0 2.4E-53 8.2E-58 410.0 18.1 246 292-566 13-263 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 3.2E-53 1.1E-57 414.8 12.6 248 292-566 24-282 (304)
15 4g31_A Eukaryotic translation 100.0 3.4E-51 1.2E-55 402.4 17.7 250 292-566 5-280 (299)
16 4b99_A Mitogen-activated prote 100.0 8.4E-49 2.9E-53 400.0 18.3 269 292-566 54-345 (398)
17 4f9c_A Cell division cycle 7-r 100.0 2.1E-48 7E-53 393.0 19.9 268 290-566 19-353 (361)
18 3uto_A Twitchin; kinase, muscl 100.0 5.2E-48 1.8E-52 413.5 21.1 253 291-566 156-411 (573)
19 3v5w_A G-protein coupled recep 100.0 9.1E-48 3.1E-52 408.2 17.4 249 292-566 189-450 (689)
20 2qkw_B Protein kinase; three-h 100.0 5E-47 1.7E-51 380.3 20.6 281 283-572 30-315 (321)
21 3uim_A Brassinosteroid insensi 100.0 3.1E-46 1.1E-50 375.4 20.8 287 276-569 14-308 (326)
22 3s95_A LIMK-1, LIM domain kina 100.0 5.3E-46 1.8E-50 370.9 20.0 264 292-576 10-286 (310)
23 3fxz_A Serine/threonine-protei 100.0 1.7E-45 5.9E-50 364.6 21.8 251 291-566 19-270 (297)
24 3soc_A Activin receptor type-2 100.0 9.5E-46 3.3E-50 370.9 20.1 276 291-573 23-319 (322)
25 2psq_A Fibroblast growth facto 100.0 1.8E-45 6.3E-50 375.6 20.3 262 291-575 80-367 (370)
26 2c30_A Serine/threonine-protei 100.0 9.1E-45 3.1E-49 363.4 23.2 262 280-566 23-295 (321)
27 3cbl_A C-FES, proto-oncogene t 100.0 5.7E-46 2E-50 380.6 14.3 261 291-574 113-376 (377)
28 2nru_A Interleukin-1 receptor- 100.0 5.3E-44 1.8E-48 356.0 27.9 282 278-572 11-306 (307)
29 3p86_A Serine/threonine-protei 100.0 5E-45 1.7E-49 363.2 18.5 260 290-574 35-300 (309)
30 4hcu_A Tyrosine-protein kinase 100.0 5.4E-45 1.8E-49 356.0 17.5 257 292-573 10-267 (269)
31 3kul_A Ephrin type-A receptor 100.0 5.8E-45 2E-49 365.5 18.2 260 292-574 49-315 (325)
32 3ugc_A Tyrosine-protein kinase 100.0 3.2E-45 1.1E-49 362.6 15.9 276 291-575 9-294 (295)
33 3fe3_A MAP/microtubule affinit 100.0 9.5E-45 3.2E-49 363.7 19.4 248 291-566 14-265 (328)
34 3sxs_A Cytoplasmic tyrosine-pr 100.0 4.5E-45 1.6E-49 356.3 16.5 258 291-573 7-265 (268)
35 1tki_A Titin; serine kinase, m 100.0 1.3E-44 4.4E-49 362.1 20.1 253 291-567 4-259 (321)
36 3zgw_A Maternal embryonic leuc 100.0 6.2E-45 2.1E-49 367.1 16.7 251 290-566 8-261 (347)
37 3vhe_A Vascular endothelial gr 100.0 6.8E-45 2.3E-49 370.8 16.9 270 283-574 13-357 (359)
38 2yab_A Death-associated protei 100.0 4.2E-44 1.4E-48 363.2 22.4 252 291-566 11-273 (361)
39 3tki_A Serine/threonine-protei 100.0 1.6E-44 5.5E-49 361.9 18.3 253 292-566 7-262 (323)
40 2qol_A Ephrin receptor; recept 100.0 1.2E-44 4.1E-49 369.8 17.3 260 292-574 45-311 (373)
41 3gen_A Tyrosine-protein kinase 100.0 1.7E-44 5.7E-49 355.3 17.6 258 291-573 23-281 (283)
42 3lb7_A RAF proto-oncogene seri 100.0 2.3E-44 8E-49 358.1 18.8 265 291-576 35-304 (307)
43 4aw2_A Serine/threonine-protei 100.0 4.1E-45 1.4E-49 378.9 12.8 260 287-566 69-339 (437)
44 3niz_A Rhodanese family protei 100.0 1.2E-43 4E-48 353.9 22.4 269 291-566 20-301 (311)
45 1o6l_A RAC-beta serine/threoni 100.0 7.9E-44 2.7E-48 358.0 21.3 248 292-566 5-261 (337)
46 3tt0_A Basic fibroblast growth 100.0 4E-44 1.4E-48 367.8 19.1 261 291-574 68-354 (382)
47 1kob_A Twitchin; kinase, intra 100.0 7.4E-44 2.5E-48 364.7 20.8 253 291-566 50-305 (387)
48 2y0a_A Death-associated protei 100.0 1.3E-43 4.5E-48 355.8 22.0 251 292-566 11-272 (326)
49 1rjb_A FL cytokine receptor; k 100.0 4.6E-44 1.6E-48 362.4 18.7 264 291-576 44-338 (344)
50 3c0i_A Peripheral plasma membr 100.0 4.4E-44 1.5E-48 363.0 18.4 252 292-566 24-287 (351)
51 3poz_A Epidermal growth factor 100.0 2.3E-44 7.9E-49 361.7 16.2 258 292-573 15-279 (327)
52 3l9p_A Anaplastic lymphoma kin 100.0 9.9E-45 3.4E-49 369.9 13.6 261 292-575 71-348 (367)
53 4eqm_A Protein kinase; transfe 100.0 7E-44 2.4E-48 352.6 19.1 261 291-572 10-275 (294)
54 1luf_A Muscle-specific tyrosin 100.0 1.8E-44 6E-49 365.4 15.1 264 290-576 45-339 (343)
55 3q4u_A Activin receptor type-1 100.0 2E-43 6.7E-48 350.8 21.9 265 291-570 7-300 (301)
56 1t46_A HOMO sapiens V-KIT hard 100.0 6.9E-44 2.3E-48 356.2 18.5 263 291-575 22-310 (313)
57 3h4j_B AMPK kdaid, SNF1-like p 100.0 7.5E-44 2.6E-48 357.7 18.8 246 292-566 9-259 (336)
58 2x4f_A Myosin light chain kina 100.0 1.2E-43 4E-48 362.3 20.3 247 297-566 94-343 (373)
59 3soa_A Calcium/calmodulin-depe 100.0 1.5E-43 5.2E-48 368.5 21.5 254 290-566 9-268 (444)
60 2ivs_A Proto-oncogene tyrosine 100.0 6.5E-44 2.2E-48 356.5 18.0 260 291-573 22-312 (314)
61 4f0f_A Serine/threonine-protei 100.0 2.4E-43 8.2E-48 347.7 21.7 252 292-570 19-287 (287)
62 3op5_A Serine/threonine-protei 100.0 8.6E-44 3E-48 363.0 19.1 271 291-575 34-332 (364)
63 1csn_A Casein kinase-1; phosph 100.0 2.5E-43 8.6E-48 349.5 21.8 267 291-576 9-287 (298)
64 2bdw_A Hypothetical protein K1 100.0 1.7E-43 5.7E-48 359.8 20.6 252 291-566 28-285 (362)
65 2izr_A Casein kinase I isoform 100.0 1.6E-43 5.5E-48 356.2 20.2 265 291-575 8-284 (330)
66 3kex_A Receptor tyrosine-prote 100.0 8.3E-44 2.8E-48 357.4 17.9 258 292-573 13-277 (325)
67 3o0g_A Cell division protein k 100.0 3.5E-43 1.2E-47 347.4 21.9 269 292-566 2-283 (292)
68 3mdy_A Bone morphogenetic prot 100.0 6.2E-43 2.1E-47 353.1 24.0 270 287-574 32-333 (337)
69 3v8s_A RHO-associated protein 100.0 4.6E-44 1.6E-48 368.2 15.8 256 288-566 65-330 (410)
70 1ob3_A PFPK5, cell division co 100.0 1.6E-43 5.4E-48 349.1 18.7 268 292-566 2-281 (288)
71 1k9a_A Carboxyl-terminal SRC k 100.0 2.2E-43 7.4E-48 369.7 20.7 252 291-573 192-446 (450)
72 1mp8_A Focal adhesion kinase 1 100.0 8.9E-44 3E-48 349.7 16.5 260 291-575 14-279 (281)
73 4euu_A Serine/threonine-protei 100.0 5.6E-43 1.9E-47 350.5 22.6 273 292-570 9-307 (319)
74 3t9t_A Tyrosine-protein kinase 100.0 8.6E-44 2.9E-48 347.0 16.3 257 292-573 8-265 (267)
75 3qup_A Tyrosine-protein kinase 100.0 8E-44 2.7E-48 357.4 16.4 262 290-574 21-300 (323)
76 3txo_A PKC-L, NPKC-ETA, protei 100.0 8.3E-44 2.8E-48 360.2 16.6 249 291-566 22-281 (353)
77 3g2f_A Bone morphogenetic prot 100.0 1.1E-43 3.9E-48 358.3 16.8 281 291-580 12-326 (336)
78 4dc2_A Protein kinase C IOTA t 100.0 1.8E-43 6.2E-48 361.7 18.0 255 291-566 51-319 (396)
79 1fot_A TPK1 delta, CAMP-depend 100.0 7.2E-43 2.5E-47 348.4 21.8 245 292-566 6-259 (318)
80 3og7_A AKAP9-BRAF fusion prote 100.0 2.1E-43 7.2E-48 348.4 17.6 261 291-572 23-288 (289)
81 2xir_A Vascular endothelial gr 100.0 1.7E-43 5.9E-48 353.8 17.2 271 283-575 18-313 (316)
82 2pvf_A Fibroblast growth facto 100.0 2.3E-43 7.8E-48 355.7 18.2 262 291-575 34-321 (334)
83 1qcf_A Haematopoetic cell kina 100.0 5.9E-44 2E-48 374.7 14.4 257 290-572 186-444 (454)
84 4fr4_A YANK1, serine/threonine 100.0 2.9E-43 1E-47 359.0 19.0 249 292-565 15-271 (384)
85 3dtc_A Mitogen-activated prote 100.0 1.7E-43 6E-48 345.6 16.1 250 292-570 7-271 (271)
86 2vd5_A DMPK protein; serine/th 100.0 1.3E-43 4.3E-48 365.2 15.7 260 286-566 55-328 (412)
87 4e5w_A Tyrosine-protein kinase 100.0 3.4E-43 1.2E-47 349.3 18.2 271 292-571 21-301 (302)
88 2zv2_A Calcium/calmodulin-depe 100.0 5.3E-43 1.8E-47 347.2 19.4 250 291-566 12-293 (298)
89 2i1m_A Macrophage colony-stimu 100.0 2.8E-43 9.5E-48 355.0 17.7 266 290-577 44-331 (333)
90 4fvq_A Tyrosine-protein kinase 100.0 8.8E-44 3E-48 351.2 13.6 251 292-572 8-275 (289)
91 1xjd_A Protein kinase C, theta 100.0 2.3E-43 7.7E-48 355.6 16.7 251 289-566 14-270 (345)
92 2w4o_A Calcium/calmodulin-depe 100.0 5.1E-43 1.8E-47 354.7 19.3 252 290-566 51-306 (349)
93 3hko_A Calcium/calmodulin-depe 100.0 6E-43 2E-47 354.4 19.6 260 287-566 21-331 (345)
94 3lzb_A Epidermal growth factor 100.0 2.9E-43 9.8E-48 353.5 17.1 259 292-574 15-280 (327)
95 1p4o_A Insulin-like growth fac 100.0 3.6E-44 1.2E-48 359.8 10.4 269 285-576 18-303 (322)
96 2eva_A TAK1 kinase - TAB1 chim 100.0 9.1E-43 3.1E-47 346.8 20.5 255 292-574 8-265 (307)
97 1u59_A Tyrosine-protein kinase 100.0 9.5E-43 3.3E-47 343.4 20.4 263 292-578 9-278 (287)
98 3cok_A Serine/threonine-protei 100.0 5.9E-43 2E-47 343.3 18.8 250 291-566 10-263 (278)
99 2pmi_A Negative RE, cyclin-dep 100.0 1.2E-42 3.9E-47 347.7 21.1 269 291-566 4-294 (317)
100 1opk_A P150, C-ABL, proto-onco 100.0 2.1E-43 7.2E-48 373.9 16.5 256 291-571 219-477 (495)
101 3f3z_A Calcium/calmodulin-depe 100.0 1.5E-42 5.3E-47 340.1 21.0 251 291-566 8-262 (277)
102 3p1a_A MYT1 kinase, membrane-a 100.0 7.3E-43 2.5E-47 348.2 18.9 245 292-566 57-305 (311)
103 2w1i_A JAK2; chromosomal rearr 100.0 6.3E-43 2.1E-47 351.2 18.5 272 292-575 41-325 (326)
104 3kmu_A ILK, integrin-linked ki 100.0 3E-43 1E-47 343.9 15.7 251 292-572 10-270 (271)
105 3gni_B Strad alpha; kinase fol 100.0 8.4E-43 2.9E-47 359.1 19.7 272 291-566 24-334 (389)
106 3lxl_A Tyrosine-protein kinase 100.0 2.5E-43 8.4E-48 354.4 15.3 276 292-575 23-306 (327)
107 3qd2_B Eukaryotic translation 100.0 8.5E-43 2.9E-47 351.2 19.2 251 291-566 5-326 (332)
108 1rdq_E PKA C-alpha, CAMP-depen 100.0 1E-42 3.5E-47 352.0 19.8 245 292-566 41-294 (350)
109 3lxp_A Non-receptor tyrosine-p 100.0 1.2E-42 4E-47 347.9 20.0 273 294-577 33-315 (318)
110 3uc3_A Serine/threonine-protei 100.0 9.2E-43 3.1E-47 354.4 19.4 253 291-566 19-275 (361)
111 2a2a_A Death-associated protei 100.0 2E-42 7E-47 346.7 21.7 252 291-566 11-273 (321)
112 3a8x_A Protein kinase C IOTA t 100.0 5.8E-43 2E-47 353.2 17.8 254 292-566 9-276 (345)
113 3dbq_A Dual specificity protei 100.0 3.8E-43 1.3E-47 355.3 16.4 253 291-567 8-275 (343)
114 3brb_A Proto-oncogene tyrosine 100.0 5.7E-43 2E-47 349.5 17.5 263 290-575 32-311 (313)
115 2yex_A Serine/threonine-protei 100.0 1.4E-42 4.6E-47 340.3 19.7 254 291-566 6-262 (276)
116 3kk8_A Calcium/calmodulin depe 100.0 2.1E-42 7E-47 340.5 21.0 252 291-566 5-262 (284)
117 3c1x_A Hepatocyte growth facto 100.0 1.4E-43 4.9E-48 361.4 13.2 260 294-576 91-359 (373)
118 3kn6_A Ribosomal protein S6 ki 100.0 1.2E-42 4.2E-47 348.5 19.7 251 297-566 16-271 (325)
119 3cc6_A Protein tyrosine kinase 100.0 6.3E-43 2.2E-47 343.6 17.1 261 291-576 11-277 (281)
120 3a62_A Ribosomal protein S6 ki 100.0 1.1E-42 3.6E-47 349.4 19.1 249 291-566 16-277 (327)
121 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.5E-43 8.6E-48 369.4 14.9 256 291-572 183-440 (452)
122 2i0e_A Protein kinase C-beta I 100.0 8.9E-43 3.1E-47 352.4 18.3 250 290-566 18-277 (353)
123 3ork_A Serine/threonine protei 100.0 2.2E-43 7.4E-48 352.1 13.5 255 291-566 11-274 (311)
124 3kfa_A Tyrosine-protein kinase 100.0 7E-43 2.4E-47 344.6 16.7 261 290-575 11-274 (288)
125 1qpc_A LCK kinase; alpha beta 100.0 8.2E-43 2.8E-47 342.4 17.1 260 291-576 12-273 (279)
126 1b6c_B TGF-B superfamily recep 100.0 6.4E-42 2.2E-46 346.4 24.0 277 283-574 33-338 (342)
127 3pls_A Macrophage-stimulating 100.0 1.6E-42 5.4E-47 343.7 19.0 261 294-576 23-291 (298)
128 1mqb_A Ephrin type-A receptor 100.0 1.3E-42 4.3E-47 349.8 18.5 261 292-575 44-312 (333)
129 4hgt_A Casein kinase I isoform 100.0 2.8E-42 9.4E-47 341.6 20.6 266 290-576 7-284 (296)
130 3f66_A Hepatocyte growth facto 100.0 1.5E-42 5.1E-47 344.0 18.6 261 292-575 25-294 (298)
131 3g33_A Cell division protein k 100.0 3.1E-42 1.1E-46 343.4 20.9 269 290-566 7-297 (308)
132 2wqm_A Serine/threonine-protei 100.0 4.1E-42 1.4E-46 342.8 21.6 262 291-574 31-299 (310)
133 2buj_A Serine/threonine-protei 100.0 1.4E-42 4.8E-47 347.4 18.1 260 291-571 28-305 (317)
134 2y94_A 5'-AMP-activated protei 100.0 1.6E-42 5.4E-47 363.1 19.3 247 292-566 16-267 (476)
135 2ac3_A MAP kinase-interacting 100.0 1.7E-42 6E-47 346.5 18.8 268 292-566 12-296 (316)
136 2zmd_A Dual specificity protei 100.0 1.1E-42 3.9E-47 357.3 17.7 251 292-566 56-321 (390)
137 2qr7_A Ribosomal protein S6 ki 100.0 7.9E-43 2.7E-47 351.8 16.1 252 291-566 21-278 (342)
138 3fdn_A Serine/threonine-protei 100.0 1.3E-42 4.6E-47 340.9 17.3 248 291-567 8-259 (279)
139 3mtl_A Cell division protein k 100.0 7.5E-43 2.6E-47 350.2 15.6 268 292-566 2-282 (324)
140 3uzp_A CKI-delta, CKID, casein 100.0 1.3E-41 4.6E-46 336.7 24.0 264 291-575 8-283 (296)
141 3dls_A PAS domain-containing s 100.0 1.4E-42 4.7E-47 349.5 16.7 243 290-566 22-275 (335)
142 2eue_A Carbon catabolite derep 100.0 1.4E-42 4.8E-47 340.0 16.3 246 292-566 13-263 (275)
143 1nxk_A MAP kinase-activated pr 100.0 4.1E-42 1.4E-46 354.2 20.6 250 292-567 61-323 (400)
144 3is5_A Calcium-dependent prote 100.0 2.4E-42 8.2E-47 340.1 18.0 250 292-566 22-279 (285)
145 2ozo_A Tyrosine-protein kinase 100.0 3.6E-42 1.2E-46 372.9 21.0 253 299-575 343-601 (613)
146 2h34_A Serine/threonine-protei 100.0 4.3E-42 1.5E-46 342.4 19.9 261 290-573 32-297 (309)
147 4ejn_A RAC-alpha serine/threon 100.0 1E-42 3.5E-47 364.7 15.9 249 291-566 147-405 (446)
148 3bhy_A Death-associated protei 100.0 6.1E-42 2.1E-46 336.9 20.5 251 292-566 5-266 (283)
149 1fvr_A Tyrosine-protein kinase 100.0 2.3E-42 8E-47 347.3 17.8 257 292-574 25-302 (327)
150 4agu_A Cyclin-dependent kinase 100.0 4.9E-42 1.7E-46 342.4 20.0 267 292-566 3-285 (311)
151 2v62_A Serine/threonine-protei 100.0 1.2E-42 4E-47 352.0 15.7 264 292-570 37-326 (345)
152 2jii_A Serine/threonine-protei 100.0 1.5E-42 5.3E-47 352.2 16.5 266 292-576 42-340 (352)
153 4eut_A Serine/threonine-protei 100.0 3.1E-42 1E-46 355.4 18.7 276 292-573 9-310 (396)
154 1u5q_A Serine/threonine protei 100.0 1.2E-42 4.2E-47 351.4 15.2 247 292-567 54-307 (348)
155 3llt_A Serine/threonine kinase 100.0 2.6E-42 8.9E-47 351.8 17.4 274 281-566 24-356 (360)
156 2yfx_A Tyrosine-protein kinase 100.0 1.4E-42 4.8E-47 348.9 15.2 262 291-575 29-307 (327)
157 3rp9_A Mitogen-activated prote 100.0 6.2E-42 2.1E-46 360.3 20.8 271 291-566 52-397 (458)
158 2acx_A G protein-coupled recep 100.0 4.1E-42 1.4E-46 364.6 19.5 253 291-566 183-445 (576)
159 2jam_A Calcium/calmodulin-depe 100.0 5.2E-42 1.8E-46 341.0 19.1 251 291-566 8-262 (304)
160 3n9x_A Phosphotransferase; mal 100.0 6.9E-42 2.4E-46 356.6 20.8 272 290-566 24-362 (432)
161 3e7e_A HBUB1, BUB1A, mitotic c 100.0 6.9E-42 2.4E-46 349.2 20.4 254 291-575 64-342 (365)
162 3gxj_A TGF-beta receptor type- 100.0 8.3E-44 2.8E-48 353.8 5.9 269 291-574 2-299 (303)
163 3i6u_A CDS1, serine/threonine- 100.0 4.9E-42 1.7E-46 356.1 19.4 254 289-566 132-400 (419)
164 3mwu_A Calmodulin-domain prote 100.0 9.7E-42 3.3E-46 361.3 21.7 251 291-566 21-277 (486)
165 2j7t_A Serine/threonine-protei 100.0 1.7E-42 5.8E-47 344.3 14.9 253 291-566 18-276 (302)
166 3com_A Serine/threonine-protei 100.0 8.3E-42 2.8E-46 341.3 20.0 252 290-566 27-279 (314)
167 1xbb_A Tyrosine-protein kinase 100.0 1.8E-42 6.2E-47 342.1 14.9 263 291-578 15-285 (291)
168 3oz6_A Mitogen-activated prote 100.0 4.5E-42 1.5E-46 353.5 18.2 271 289-566 6-329 (388)
169 1byg_A CSK, protein (C-termina 100.0 2.5E-42 8.4E-47 338.8 15.5 252 291-573 20-274 (278)
170 3ttj_A Mitogen-activated prote 100.0 7.4E-42 2.5E-46 358.6 20.1 265 291-566 61-356 (464)
171 3pg1_A Mitogen-activated prote 100.0 7.2E-42 2.5E-46 348.8 19.5 276 283-566 13-317 (362)
172 3c4z_A Rhodopsin kinase; Ser/T 100.0 9.7E-42 3.3E-46 361.0 21.0 253 292-566 185-449 (543)
173 2r5t_A Serine/threonine-protei 100.0 3E-42 1E-46 351.0 16.5 245 291-562 37-286 (373)
174 2y7j_A Phosphorylase B kinase 100.0 1.4E-41 4.8E-46 346.4 21.4 256 287-566 89-360 (365)
175 1ua2_A CAK, cell division prot 100.0 6.8E-42 2.3E-46 346.5 18.9 272 288-566 6-292 (346)
176 3lij_A Calcium/calmodulin depe 100.0 1.1E-41 3.9E-46 361.3 21.2 251 291-566 36-292 (494)
177 2h8h_A Proto-oncogene tyrosine 100.0 1.1E-42 3.7E-47 371.8 13.3 256 291-572 266-523 (535)
178 2a19_B Interferon-induced, dou 100.0 4.1E-42 1.4E-46 338.3 16.3 255 290-579 9-281 (284)
179 3ll6_A Cyclin G-associated kin 100.0 6.7E-42 2.3E-46 345.4 18.1 258 291-575 27-311 (337)
180 2rku_A Serine/threonine-protei 100.0 6.4E-42 2.2E-46 338.7 17.1 249 291-566 14-266 (294)
181 3nyv_A Calmodulin-domain prote 100.0 5.9E-42 2E-46 363.0 17.9 251 291-566 25-282 (484)
182 2vgo_A Serine/threonine-protei 100.0 9.3E-42 3.2E-46 335.8 18.1 246 292-566 14-263 (284)
183 1cm8_A Phosphorylated MAP kina 100.0 1E-41 3.6E-46 347.4 19.0 263 291-566 24-308 (367)
184 3q5i_A Protein kinase; CDPK, m 100.0 2E-41 6.8E-46 360.4 21.8 252 290-566 34-302 (504)
185 3nsz_A CK II alpha, casein kin 100.0 3E-41 1E-45 339.7 21.5 263 291-566 35-320 (330)
186 3byv_A Rhoptry kinase; malaria 100.0 1.9E-42 6.5E-47 354.7 12.9 252 291-577 72-373 (377)
187 3mi9_A Cell division protein k 100.0 2.5E-41 8.4E-46 343.3 20.4 270 291-566 16-312 (351)
188 3sv0_A Casein kinase I-like; t 100.0 6.4E-41 2.2E-45 351.5 24.1 265 291-574 6-280 (483)
189 1u46_A ACK-1, activated CDC42 100.0 5.6E-42 1.9E-46 338.6 15.1 260 292-574 18-286 (291)
190 2clq_A Mitogen-activated prote 100.0 1.7E-41 5.7E-46 335.9 18.5 251 293-566 23-279 (295)
191 3lm5_A Serine/threonine-protei 100.0 1.8E-41 6.3E-46 340.5 19.0 255 289-566 25-288 (327)
192 3a7i_A MST3 kinase, serine/thr 100.0 1.6E-41 5.4E-46 337.4 18.3 249 292-567 22-272 (303)
193 2owb_A Serine/threonine-protei 100.0 7.4E-42 2.5E-46 344.6 16.1 249 291-566 40-292 (335)
194 4fl3_A Tyrosine-protein kinase 100.0 9.5E-42 3.2E-46 370.5 18.0 252 298-574 375-633 (635)
195 4aaa_A Cyclin-dependent kinase 100.0 1.1E-41 3.7E-46 343.0 16.7 269 291-566 24-307 (331)
196 3eqc_A Dual specificity mitoge 100.0 6.6E-42 2.3E-46 348.8 15.2 266 292-567 33-326 (360)
197 1t4h_A Serine/threonine-protei 100.0 5.3E-41 1.8E-45 331.5 21.0 246 294-566 28-283 (290)
198 2pml_X PFPK7, Ser/Thr protein 100.0 2.3E-41 7.8E-46 343.2 18.9 266 291-566 30-323 (348)
199 3gbz_A Kinase, CMGC CDK; ssgci 100.0 9.4E-42 3.2E-46 343.0 15.7 270 289-566 31-319 (329)
200 1vzo_A Ribosomal protein S6 ki 100.0 9.5E-42 3.3E-46 346.4 15.8 254 292-567 54-323 (355)
201 2wtk_C Serine/threonine-protei 100.0 3.5E-41 1.2E-45 335.3 19.1 251 291-566 4-264 (305)
202 1phk_A Phosphorylase kinase; g 100.0 4.7E-41 1.6E-45 333.2 20.0 253 290-566 15-284 (298)
203 1x8b_A WEE1HU, WEE1-like prote 100.0 1.8E-41 6.1E-46 334.4 16.7 244 291-566 10-280 (289)
204 2h6d_A 5'-AMP-activated protei 100.0 1.8E-41 6.1E-46 332.3 16.4 248 291-566 10-262 (276)
205 2w5a_A Serine/threonine-protei 100.0 6.2E-42 2.1E-46 336.2 12.8 253 291-568 5-270 (279)
206 3pfq_A PKC-B, PKC-beta, protei 100.0 4.8E-41 1.6E-45 367.5 21.0 250 290-566 339-598 (674)
207 3q60_A ROP5B; pseudokinase, tr 100.0 5.8E-42 2E-46 350.4 12.9 263 292-575 62-364 (371)
208 3fme_A Dual specificity mitoge 100.0 2E-41 6.8E-46 334.5 15.7 251 291-566 6-267 (290)
209 2ycf_A Serine/threonine-protei 100.0 3.6E-41 1.2E-45 337.8 17.6 253 290-566 8-275 (322)
210 3eb0_A Putative uncharacterize 100.0 8.7E-41 3E-45 343.2 20.8 272 289-572 4-330 (383)
211 3an0_A Dual specificity mitoge 100.0 2.9E-41 1E-45 341.2 16.9 251 291-566 50-311 (340)
212 2vwi_A Serine/threonine-protei 100.0 7.1E-42 2.4E-46 339.9 12.2 263 290-566 13-288 (303)
213 3qyz_A Mitogen-activated prote 100.0 7.4E-41 2.5E-45 341.3 19.7 270 290-566 25-314 (364)
214 2r3i_A Cell division protein k 100.0 8.7E-41 3E-45 331.4 19.7 268 292-566 3-284 (299)
215 2xrw_A Mitogen-activated prote 100.0 9.5E-41 3.2E-45 341.3 20.5 262 291-566 24-319 (371)
216 2fst_X Mitogen-activated prote 100.0 2E-41 6.8E-46 345.0 14.8 264 290-566 27-312 (367)
217 2x7f_A TRAF2 and NCK-interacti 100.0 1.4E-41 4.6E-46 341.6 13.0 255 287-566 19-287 (326)
218 3kvw_A DYRK2, dual specificity 100.0 6.7E-41 2.3E-45 348.4 18.2 197 291-497 96-302 (429)
219 2j0j_A Focal adhesion kinase 1 100.0 3.9E-41 1.3E-45 367.1 17.2 259 291-574 389-653 (656)
220 1wak_A Serine/threonine-protei 100.0 8E-41 2.7E-45 345.5 18.0 265 292-566 37-392 (397)
221 2wei_A Calmodulin-domain prote 100.0 1.6E-40 5.3E-45 327.6 19.0 252 290-566 20-277 (287)
222 4exu_A Mitogen-activated prote 100.0 1.1E-40 3.7E-45 340.8 18.5 263 291-566 41-324 (371)
223 1zy4_A Serine/threonine-protei 100.0 1.1E-40 3.7E-45 331.2 18.0 253 291-566 5-284 (303)
224 3cek_A Dual specificity protei 100.0 7.3E-41 2.5E-45 334.2 16.2 254 290-567 26-294 (313)
225 1j1b_A Glycogen synthase kinas 100.0 1.5E-40 5.3E-45 344.9 18.7 262 292-566 54-337 (420)
226 1blx_A Cyclin-dependent kinase 100.0 3.3E-40 1.1E-44 331.5 20.5 269 290-566 9-297 (326)
227 2i6l_A Mitogen-activated prote 100.0 8.3E-41 2.8E-45 334.8 16.0 269 291-566 10-306 (320)
228 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.5E-41 8.5E-46 338.6 11.8 261 291-576 32-306 (319)
229 2b9h_A MAP kinase FUS3, mitoge 100.0 1.4E-40 4.6E-45 338.2 17.0 269 291-566 10-306 (353)
230 4e7w_A Glycogen synthase kinas 100.0 2.4E-40 8.1E-45 340.7 18.0 264 292-566 40-322 (394)
231 1z57_A Dual specificity protei 100.0 5.8E-40 2E-44 331.4 20.2 265 291-566 13-329 (339)
232 3coi_A Mitogen-activated prote 100.0 4.4E-40 1.5E-44 334.3 18.4 263 291-566 23-306 (353)
233 3e3p_A Protein kinase, putativ 100.0 1.4E-39 4.7E-44 331.7 21.4 275 285-566 16-315 (360)
234 3fhr_A MAP kinase-activated pr 100.0 3.7E-40 1.3E-44 332.2 16.8 254 290-567 26-289 (336)
235 3rgf_A Cyclin-dependent kinase 100.0 2.9E-40 1E-44 341.8 16.4 268 293-566 21-334 (405)
236 3p23_A Serine/threonine-protei 100.0 3E-40 1E-44 343.2 16.5 250 292-566 24-284 (432)
237 2rio_A Serine/threonine-protei 100.0 5.6E-40 1.9E-44 342.2 18.4 251 293-566 16-296 (434)
238 3aln_A Dual specificity mitoge 100.0 4.7E-40 1.6E-44 330.5 17.1 253 292-566 22-286 (327)
239 2vx3_A Dual specificity tyrosi 100.0 2.7E-39 9.3E-44 331.9 21.3 199 290-496 52-260 (382)
240 2dyl_A Dual specificity mitoge 100.0 6.4E-40 2.2E-44 328.1 16.1 252 291-566 24-284 (318)
241 3a99_A Proto-oncogene serine/t 100.0 4.2E-40 1.4E-44 329.6 14.3 243 289-566 40-294 (320)
242 2eu9_A Dual specificity protei 100.0 2.4E-39 8.3E-44 329.1 19.7 264 291-566 18-334 (355)
243 2iwi_A Serine/threonine-protei 100.0 6.1E-40 2.1E-44 327.4 14.8 244 288-566 27-284 (312)
244 1q8y_A SR protein kinase; tran 100.0 1E-39 3.4E-44 334.4 15.3 265 292-566 19-334 (373)
245 3qa8_A MGC80376 protein; kinas 100.0 4.3E-39 1.5E-43 344.6 17.5 264 291-564 13-296 (676)
246 3uqc_A Probable conserved tran 100.0 5.7E-38 2E-42 308.4 17.5 233 292-574 31-267 (286)
247 3dzo_A Rhoptry kinase domain; 100.0 1.9E-38 6.6E-43 328.4 14.4 249 292-575 78-375 (413)
248 2pzi_A Probable serine/threoni 100.0 4E-38 1.4E-42 346.7 17.2 242 292-574 80-330 (681)
249 3m2w_A MAP kinase-activated pr 100.0 1.4E-37 4.6E-42 308.4 19.1 231 291-566 16-257 (299)
250 2vuw_A Serine/threonine-protei 100.0 5.5E-37 1.9E-41 309.3 10.1 245 291-566 19-332 (336)
251 1ogq_A PGIP-2, polygalacturona 100.0 2E-31 6.8E-36 265.4 13.2 215 2-218 87-309 (313)
252 3rgz_A Protein brassinosteroid 100.0 2.5E-30 8.5E-35 288.8 18.9 224 1-227 451-751 (768)
253 4azs_A Methyltransferase WBDD; 100.0 8.2E-31 2.8E-35 280.4 5.0 185 300-494 242-438 (569)
254 3zyi_A Leucine-rich repeat-con 100.0 2.5E-28 8.6E-33 256.1 19.0 215 1-217 84-307 (452)
255 3zyj_A Leucine-rich repeat-con 100.0 3.2E-28 1.1E-32 254.3 19.4 215 1-217 73-296 (440)
256 1ozn_A Reticulon 4 receptor; N 100.0 1.2E-28 4.2E-33 242.1 12.9 212 3-217 22-242 (285)
257 1ozn_A Reticulon 4 receptor; N 100.0 1.2E-27 4.1E-32 235.0 17.0 217 1-217 41-265 (285)
258 1ogq_A PGIP-2, polygalacturona 100.0 1.8E-28 6.3E-33 243.9 11.2 215 1-217 59-285 (313)
259 3oja_A Leucine-rich immune mol 99.9 1.4E-29 4.8E-34 267.2 2.2 194 17-215 35-252 (487)
260 3rgz_A Protein brassinosteroid 99.9 5.2E-27 1.8E-31 262.0 17.8 217 1-217 427-721 (768)
261 2z66_A Variable lymphocyte rec 99.9 4.3E-27 1.5E-31 233.6 14.9 216 1-217 37-265 (306)
262 1p9a_G Platelet glycoprotein I 99.9 1.2E-26 4.1E-31 227.9 17.4 202 11-216 5-211 (290)
263 3v47_A TOLL-like receptor 5B a 99.9 1.1E-26 3.8E-31 244.0 17.9 217 1-217 88-412 (455)
264 2z80_A TOLL-like receptor 2, v 99.9 1E-27 3.5E-32 243.1 9.5 217 1-217 61-318 (353)
265 2z62_A TOLL-like receptor 4, v 99.9 3.5E-26 1.2E-30 223.4 17.7 208 7-217 21-241 (276)
266 3o6n_A APL1; leucine-rich repe 99.9 2.5E-26 8.6E-31 236.2 17.1 208 1-211 78-329 (390)
267 2o6q_A Variable lymphocyte rec 99.9 1.7E-25 5.7E-30 217.8 20.3 198 17-217 17-222 (270)
268 3oja_B Anopheles plasmodium-re 99.9 4.3E-26 1.5E-30 247.4 17.5 99 1-99 84-183 (597)
269 4fcg_A Uncharacterized protein 99.9 2E-26 6.7E-31 230.7 13.3 204 1-208 90-309 (328)
270 2id5_A Lingo-1, leucine rich r 99.9 2.8E-26 9.7E-31 242.4 15.1 216 2-217 42-337 (477)
271 3en9_A Glycoprotease, O-sialog 99.9 5.7E-27 2E-31 249.3 9.6 186 295-495 339-539 (540)
272 2o6q_A Variable lymphocyte rec 99.9 2.8E-25 9.5E-30 216.2 20.3 193 1-196 25-224 (270)
273 3zyj_A Leucine-rich repeat-con 99.9 8.7E-26 3E-30 235.9 17.7 195 1-195 97-297 (440)
274 2z62_A TOLL-like receptor 4, v 99.9 6.7E-26 2.3E-30 221.4 15.7 196 1-197 37-244 (276)
275 3zyi_A Leucine-rich repeat-con 99.9 9E-26 3.1E-30 236.6 17.4 195 1-195 108-308 (452)
276 3j0a_A TOLL-like receptor 5; m 99.9 6.9E-26 2.4E-30 255.5 16.2 212 2-217 276-564 (844)
277 4fcg_A Uncharacterized protein 99.9 7.7E-26 2.6E-30 226.4 13.4 190 1-192 113-316 (328)
278 1p9a_G Platelet glycoprotein I 99.9 4.3E-25 1.5E-29 216.8 18.0 188 1-194 19-212 (290)
279 2ft3_A Biglycan; proteoglycan, 99.9 5.7E-25 2E-29 220.9 18.4 206 2-214 64-278 (332)
280 1xku_A Decorin; proteoglycan, 99.9 7.1E-25 2.4E-29 220.0 18.6 207 1-213 61-276 (330)
281 1xku_A Decorin; proteoglycan, 99.9 7E-25 2.4E-29 220.1 18.3 211 1-215 85-308 (330)
282 1ziw_A TOLL-like receptor 3; i 99.9 3.3E-25 1.1E-29 244.8 16.0 217 1-217 390-626 (680)
283 2z66_A Variable lymphocyte rec 99.9 2.8E-25 9.6E-30 220.5 13.5 212 2-216 17-239 (306)
284 2ft3_A Biglycan; proteoglycan, 99.9 1.4E-24 4.8E-29 218.0 18.7 209 1-214 87-308 (332)
285 1wwl_A Monocyte differentiatio 99.9 7.6E-26 2.6E-30 225.0 9.1 207 2-213 73-309 (312)
286 2id5_A Lingo-1, leucine rich r 99.9 3.6E-25 1.2E-29 233.9 14.0 217 1-217 113-360 (477)
287 3o6n_A APL1; leucine-rich repe 99.9 4E-25 1.4E-29 227.2 13.8 211 1-213 54-308 (390)
288 4g8a_A TOLL-like receptor 4; l 99.9 1.1E-24 3.7E-29 238.6 18.1 95 123-217 488-584 (635)
289 3t6q_A CD180 antigen; protein- 99.9 4.7E-25 1.6E-29 240.3 14.8 205 12-217 346-564 (606)
290 1wwl_A Monocyte differentiatio 99.9 3.8E-25 1.3E-29 220.0 12.5 186 1-192 104-311 (312)
291 3v47_A TOLL-like receptor 5B a 99.9 1.2E-24 4.1E-29 228.5 15.7 99 1-99 39-141 (455)
292 3vq2_A TLR4, TOLL-like recepto 99.9 7.4E-25 2.5E-29 238.7 14.0 206 11-217 345-562 (606)
293 3o53_A Protein LRIM1, AGAP0063 99.9 3E-25 1E-29 221.3 9.8 200 11-215 29-252 (317)
294 3oja_B Anopheles plasmodium-re 99.9 1.4E-24 4.7E-29 235.5 15.8 210 1-212 60-313 (597)
295 3t6q_A CD180 antigen; protein- 99.9 3.2E-24 1.1E-28 233.6 16.6 212 1-212 42-313 (606)
296 3rfs_A Internalin B, repeat mo 99.9 7.4E-24 2.5E-28 206.3 17.4 182 11-196 36-224 (272)
297 3m19_A Variable lymphocyte rec 99.9 1.7E-23 5.9E-28 201.2 17.9 177 16-195 14-197 (251)
298 2xwt_C Thyrotropin receptor; s 99.9 2.7E-24 9.1E-29 205.3 11.2 197 7-210 25-236 (239)
299 2z80_A TOLL-like receptor 2, v 99.9 1.1E-24 3.6E-29 220.9 8.5 196 1-196 85-320 (353)
300 4eco_A Uncharacterized protein 99.9 1.1E-24 3.9E-29 237.6 8.4 204 8-213 239-470 (636)
301 4glp_A Monocyte differentiatio 99.9 7.5E-24 2.6E-28 210.5 13.2 195 15-213 90-307 (310)
302 4ecn_A Leucine-rich repeat pro 99.9 2.7E-24 9.1E-29 239.1 10.4 208 1-213 434-686 (876)
303 2xwt_C Thyrotropin receptor; s 99.9 6.8E-24 2.3E-28 202.5 11.9 183 1-188 40-237 (239)
304 2z7x_B TOLL-like receptor 1, v 99.9 1.8E-23 6.3E-28 223.3 16.2 154 61-217 321-485 (520)
305 3o53_A Protein LRIM1, AGAP0063 99.9 1.9E-24 6.4E-29 215.5 7.7 195 16-213 10-227 (317)
306 1h6u_A Internalin H; cell adhe 99.9 1.1E-23 3.9E-28 208.7 13.3 191 12-214 37-231 (308)
307 4ecn_A Leucine-rich repeat pro 99.9 7.4E-24 2.5E-28 235.6 13.2 210 1-214 332-658 (876)
308 1ziw_A TOLL-like receptor 3; i 99.9 2.3E-23 7.9E-28 230.0 17.1 195 1-195 414-627 (680)
309 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 2E-23 6.9E-28 225.0 16.1 154 61-217 350-514 (562)
310 3oja_A Leucine-rich immune mol 99.9 2.8E-24 9.5E-29 226.7 9.1 179 32-213 22-227 (487)
311 4eco_A Uncharacterized protein 99.9 6.8E-24 2.3E-28 231.5 12.4 210 1-213 258-501 (636)
312 3rfs_A Internalin B, repeat mo 99.9 3.1E-23 1E-27 201.9 14.6 184 2-196 51-241 (272)
313 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 2.3E-23 8E-28 224.5 15.1 121 2-125 62-191 (562)
314 3vq2_A TLR4, TOLL-like recepto 99.9 1.8E-23 6E-28 227.8 14.1 194 1-196 359-564 (606)
315 2z63_A TOLL-like receptor 4, v 99.9 1.5E-23 5E-28 226.7 13.2 214 2-217 292-535 (570)
316 1zar_A RIO2 kinase; serine kin 99.9 4.6E-24 1.6E-28 208.1 8.3 150 287-467 85-252 (282)
317 3j0a_A TOLL-like receptor 5; m 99.9 3.8E-23 1.3E-27 233.1 15.5 98 2-99 34-135 (844)
318 4glp_A Monocyte differentiatio 99.9 1.9E-23 6.6E-28 207.5 11.4 186 1-191 100-308 (310)
319 1h6u_A Internalin H; cell adhe 99.9 1.1E-22 3.6E-27 201.7 16.1 181 1-194 50-234 (308)
320 2z7x_B TOLL-like receptor 1, v 99.9 1.6E-23 5.4E-28 223.8 10.9 123 2-127 31-162 (520)
321 3m19_A Variable lymphocyte rec 99.9 2.3E-22 7.9E-27 193.3 17.5 164 2-168 24-194 (251)
322 2z81_A CD282 antigen, TOLL-lik 99.9 4.5E-23 1.6E-27 221.8 12.4 126 1-126 35-169 (549)
323 4fmz_A Internalin; leucine ric 99.9 2.9E-22 9.8E-27 202.5 16.9 202 1-211 119-344 (347)
324 2z63_A TOLL-like receptor 4, v 99.9 1.2E-22 4.1E-27 219.6 14.2 160 2-162 38-209 (570)
325 2z81_A CD282 antigen, TOLL-lik 99.9 9E-23 3.1E-27 219.5 11.6 208 2-212 15-235 (549)
326 1h6t_A Internalin B; cell adhe 99.9 3.7E-22 1.3E-26 196.0 12.9 171 12-193 42-216 (291)
327 3bz5_A Internalin-J, INLJ; leu 99.9 2.5E-21 8.5E-26 202.3 19.7 192 2-213 52-246 (457)
328 1o6v_A Internalin A; bacterial 99.9 1.4E-21 4.8E-26 205.6 17.6 193 12-214 173-389 (466)
329 2v9t_B SLIT homolog 2 protein 99.9 8.7E-22 3E-26 185.0 11.4 155 19-194 14-169 (220)
330 4fmz_A Internalin; leucine ric 99.9 5.6E-21 1.9E-25 193.0 18.1 198 1-212 53-255 (347)
331 2v70_A SLIT-2, SLIT homolog 2 99.9 8.4E-22 2.9E-26 185.1 10.7 157 18-195 13-171 (220)
332 2o6s_A Variable lymphocyte rec 99.9 5.9E-21 2E-25 177.9 15.8 156 16-195 28-183 (208)
333 3bz5_A Internalin-J, INLJ; leu 99.9 1.3E-20 4.5E-25 196.9 20.1 186 1-208 73-262 (457)
334 1o6v_A Internalin A; bacterial 99.9 5.4E-21 1.8E-25 201.1 16.9 198 2-214 144-345 (466)
335 2xot_A Amphoterin-induced prot 99.9 2.1E-21 7.1E-26 197.0 12.6 174 18-194 20-206 (361)
336 1m9s_A Internalin B; cell inva 99.9 2.3E-21 7.9E-26 208.4 13.4 172 12-194 39-214 (605)
337 3e6j_A Variable lymphocyte rec 99.8 1.1E-20 3.6E-25 178.8 15.9 157 18-196 21-178 (229)
338 3cvr_A Invasion plasmid antige 99.8 1.2E-20 4.1E-25 200.6 16.0 171 1-194 68-247 (571)
339 4ay9_X Follicle-stimulating ho 99.8 1.3E-20 4.4E-25 190.4 13.3 204 1-210 18-233 (350)
340 2v9t_B SLIT homolog 2 protein 99.8 1E-20 3.4E-25 177.7 11.7 146 1-167 20-166 (220)
341 2o6s_A Variable lymphocyte rec 99.8 1.7E-20 5.8E-25 174.8 13.0 159 18-196 9-167 (208)
342 1xeu_A Internalin C; cellular 99.8 3.9E-21 1.3E-25 185.7 6.3 169 14-194 17-189 (263)
343 2ca6_A RAN GTPase-activating p 99.8 1.6E-22 5.6E-27 207.4 -3.6 155 37-191 91-288 (386)
344 3goz_A Leucine-rich repeat-con 99.8 2.1E-21 7.3E-26 197.1 3.3 211 1-211 7-264 (362)
345 3g06_A SSPH2 (leucine-rich rep 99.8 1.9E-19 6.3E-24 193.9 17.6 54 153-213 221-274 (622)
346 3cvr_A Invasion plasmid antige 99.8 1.4E-19 4.9E-24 192.3 16.4 183 11-215 49-245 (571)
347 2xot_A Amphoterin-induced prot 99.8 5.4E-20 1.9E-24 186.5 12.5 164 1-167 27-203 (361)
348 1h6t_A Internalin B; cell adhe 99.8 5.4E-20 1.9E-24 180.6 12.0 187 16-214 24-214 (291)
349 2ca6_A RAN GTPase-activating p 99.8 7.8E-22 2.7E-26 202.3 -1.3 193 2-194 73-320 (386)
350 1jl5_A Outer protein YOPM; leu 99.8 2.5E-20 8.6E-25 194.5 9.4 194 1-213 20-228 (454)
351 1xeu_A Internalin C; cellular 99.8 5.8E-20 2E-24 177.5 10.9 155 2-168 29-187 (263)
352 3goz_A Leucine-rich repeat-con 99.8 2.3E-21 8E-26 196.8 0.6 213 1-213 31-297 (362)
353 2ast_B S-phase kinase-associat 99.8 5.4E-21 1.8E-25 192.2 3.2 209 1-213 79-306 (336)
354 4ay9_X Follicle-stimulating ho 99.8 1.3E-19 4.5E-24 183.0 13.3 209 1-214 39-259 (350)
355 4g8a_A TOLL-like receptor 4; l 99.8 1.2E-19 4.1E-24 198.5 13.9 185 11-195 366-585 (635)
356 2v70_A SLIT-2, SLIT homolog 2 99.8 2.1E-19 7.3E-24 168.6 13.0 155 43-217 14-170 (220)
357 3g06_A SSPH2 (leucine-rich rep 99.8 7.4E-19 2.5E-23 189.2 18.8 187 1-213 49-254 (622)
358 1jl5_A Outer protein YOPM; leu 99.8 1.1E-18 3.8E-23 182.0 18.9 159 16-191 131-291 (454)
359 3e6j_A Variable lymphocyte rec 99.8 7.7E-19 2.6E-23 166.0 15.6 146 2-169 29-175 (229)
360 1m9s_A Internalin B; cell inva 99.8 3.4E-19 1.2E-23 191.5 14.8 165 1-176 52-220 (605)
361 4ezg_A Putative uncharacterize 99.8 3E-19 1E-23 164.7 10.5 153 13-191 41-195 (197)
362 2ast_B S-phase kinase-associat 99.8 1.5E-20 5.2E-25 188.9 0.5 201 9-210 61-282 (336)
363 1w8a_A SLIT protein; signaling 99.8 2.3E-19 7.8E-24 164.7 8.2 154 43-217 11-166 (192)
364 1zth_A RIO1 serine protein kin 99.8 1.6E-19 5.5E-24 173.8 7.4 137 294-442 49-219 (258)
365 1w8a_A SLIT protein; signaling 99.8 1.6E-18 5.3E-23 159.1 11.7 175 19-217 11-187 (192)
366 1dce_A Protein (RAB geranylger 99.8 1.8E-21 6.2E-26 208.0 -10.0 181 12-196 345-552 (567)
367 4b8c_D Glucose-repressible alc 99.7 7.8E-19 2.7E-23 193.5 7.4 154 25-187 210-369 (727)
368 2wfh_A SLIT homolog 2 protein 99.7 2.8E-18 9.5E-23 157.4 8.9 130 44-194 14-143 (193)
369 4ezg_A Putative uncharacterize 99.7 2.3E-18 8E-23 158.7 7.4 152 37-212 41-193 (197)
370 1z7x_W Ribonuclease inhibitor; 99.7 1.9E-19 6.5E-24 189.1 -2.8 212 1-212 151-410 (461)
371 1z7x_W Ribonuclease inhibitor; 99.7 4.5E-20 1.5E-24 193.9 -7.6 200 14-213 140-383 (461)
372 1dce_A Protein (RAB geranylger 99.7 5.1E-20 1.7E-24 196.8 -7.4 179 2-184 359-567 (567)
373 2ell_A Acidic leucine-rich nuc 99.7 1.9E-17 6.3E-22 148.5 9.0 137 14-171 22-164 (168)
374 4b8c_D Glucose-repressible alc 99.7 5.2E-18 1.8E-22 186.9 4.1 177 16-196 173-360 (727)
375 4gyi_A RIO2 kinase; protein ki 99.7 1.9E-17 6.5E-22 165.3 6.3 134 294-441 97-264 (397)
376 2ell_A Acidic leucine-rich nuc 99.7 4.6E-17 1.6E-21 145.9 7.9 137 39-194 23-164 (168)
377 2o6r_A Variable lymphocyte rec 99.7 1.9E-16 6.5E-21 143.2 11.5 135 42-196 9-143 (177)
378 2wfh_A SLIT homolog 2 protein 99.7 2.9E-16 9.8E-21 143.9 12.5 127 19-167 13-140 (193)
379 2o6r_A Variable lymphocyte rec 99.7 3.8E-16 1.3E-20 141.1 13.1 133 17-170 8-141 (177)
380 2je0_A Acidic leucine-rich nuc 99.7 5.5E-17 1.9E-21 142.2 7.3 129 14-162 15-149 (149)
381 3sb4_A Hypothetical leucine ri 99.7 1.9E-16 6.6E-21 158.3 10.5 179 15-196 48-316 (329)
382 2je0_A Acidic leucine-rich nuc 99.6 1.4E-16 4.9E-21 139.6 7.1 129 39-186 16-149 (149)
383 1a9n_A U2A', U2A'; complex (nu 99.6 2.5E-16 8.6E-21 142.2 8.1 133 11-166 14-153 (176)
384 1ds9_A Outer arm dynein; leuci 99.6 1.5E-18 5E-23 160.2 -8.1 156 12-191 14-186 (198)
385 1a9n_A U2A', U2A'; complex (nu 99.6 2.7E-16 9.4E-21 142.0 6.5 135 35-191 14-154 (176)
386 1ds9_A Outer arm dynein; leuci 99.6 4.9E-18 1.7E-22 156.7 -7.9 139 35-195 13-158 (198)
387 3g39_A Variable lymphocyte rec 99.6 7.1E-15 2.4E-19 131.7 10.5 111 66-196 11-121 (170)
388 3sb4_A Hypothetical leucine ri 99.6 3.3E-15 1.1E-19 149.3 9.1 175 7-184 84-328 (329)
389 2r9u_A Variable lymphocyte rec 99.5 1.9E-14 6.6E-19 129.3 10.8 110 67-196 15-124 (174)
390 3g39_A Variable lymphocyte rec 99.5 5.1E-14 1.8E-18 126.0 11.5 104 18-142 11-115 (170)
391 2r9u_A Variable lymphocyte rec 99.5 4.7E-14 1.6E-18 126.7 11.3 104 18-142 14-118 (174)
392 4fdw_A Leucine rich hypothetic 99.5 1.1E-13 3.7E-18 141.5 13.5 200 2-210 144-355 (401)
393 4fdw_A Leucine rich hypothetic 99.4 8E-13 2.7E-17 135.0 15.0 199 2-208 122-331 (401)
394 2ifg_A High affinity nerve gro 99.4 1.8E-13 6.1E-18 137.8 8.0 59 107-166 58-116 (347)
395 3un9_A NLR family member X1; l 99.4 2.4E-15 8.1E-20 152.3 -6.0 88 104-191 154-253 (372)
396 2ifg_A High affinity nerve gro 99.4 9.2E-13 3.2E-17 132.5 10.3 95 3-99 20-115 (347)
397 3tm0_A Aminoglycoside 3'-phosp 99.4 3.8E-12 1.3E-16 122.7 12.3 147 287-440 9-212 (263)
398 3un9_A NLR family member X1; l 99.3 1.9E-14 6.6E-19 145.6 -4.8 161 15-175 71-261 (372)
399 3ogk_B Coronatine-insensitive 99.3 2E-13 6.9E-18 147.8 -0.1 182 3-185 123-326 (592)
400 3ogk_B Coronatine-insensitive 99.3 2E-13 7E-18 147.8 -1.2 205 2-208 174-411 (592)
401 1nd4_A Aminoglycoside 3'-phosp 99.2 4.9E-11 1.7E-15 114.6 11.3 136 293-440 21-213 (264)
402 2p1m_B Transport inhibitor res 99.2 1.5E-13 5E-18 149.0 -8.4 203 8-212 281-518 (594)
403 2p1m_B Transport inhibitor res 99.2 4.8E-13 1.6E-17 144.9 -5.0 122 14-136 103-242 (594)
404 2ra8_A Uncharacterized protein 99.0 1.3E-10 4.4E-15 116.5 5.3 174 16-191 107-321 (362)
405 3dxp_A Putative acyl-COA dehyd 99.0 7.4E-10 2.5E-14 111.7 10.9 142 296-441 42-248 (359)
406 2ra8_A Uncharacterized protein 99.0 3.1E-11 1.1E-15 121.0 -1.7 174 10-188 133-341 (362)
407 3sg8_A APH(2'')-ID; antibiotic 98.9 1E-09 3.5E-14 108.0 7.8 186 297-494 25-287 (304)
408 4fs7_A Uncharacterized protein 98.9 9.1E-09 3.1E-13 105.1 12.3 177 5-186 151-375 (394)
409 4gt6_A Cell surface protein; l 98.8 3.5E-08 1.2E-12 100.7 13.0 107 101-211 261-368 (394)
410 1io0_A Tropomodulin; LRR prote 98.7 3E-09 1E-13 96.2 1.7 107 36-142 32-164 (185)
411 4fs7_A Uncharacterized protein 98.7 8E-08 2.7E-12 98.1 11.3 92 3-98 127-219 (394)
412 3r70_A Aminoglycoside phosphot 98.7 1.4E-07 4.9E-12 93.2 12.6 136 293-441 38-237 (320)
413 1io0_A Tropomodulin; LRR prote 98.6 4.8E-09 1.6E-13 94.8 0.5 108 59-166 31-164 (185)
414 4gt6_A Cell surface protein; l 98.6 2.5E-07 8.7E-12 94.3 11.9 106 82-190 260-370 (394)
415 3d1u_A Putative fructosamine-3 98.5 6E-07 2.1E-11 87.0 13.1 139 296-440 19-215 (288)
416 3rw6_A Nuclear RNA export fact 98.5 8.7E-09 3E-13 97.9 -1.3 81 38-135 168-257 (267)
417 3rw6_A Nuclear RNA export fact 98.4 2.7E-08 9.3E-13 94.4 0.6 66 102-169 167-236 (267)
418 3tdw_A Gentamicin resistance p 98.4 1.4E-06 4.8E-11 85.4 12.1 135 297-440 24-223 (306)
419 4gkh_A Aminoglycoside 3'-phosp 98.4 2.1E-06 7.2E-11 82.5 13.0 140 292-440 25-222 (272)
420 4h09_A Hypothetical leucine ri 98.3 2.9E-06 9.9E-11 85.9 12.7 180 2-185 144-341 (379)
421 3ovc_A Hygromycin-B 4-O-kinase 98.3 2.8E-06 9.5E-11 85.3 11.3 74 297-376 46-122 (362)
422 4h09_A Hypothetical leucine ri 98.3 3.5E-06 1.2E-10 85.3 12.2 163 10-177 188-356 (379)
423 3ats_A Putative uncharacterize 98.3 1.8E-06 6.3E-11 86.6 9.3 80 298-377 26-122 (357)
424 2olc_A MTR kinase, methylthior 98.0 2.7E-05 9.3E-10 79.2 12.3 75 297-373 35-120 (397)
425 2q83_A YTAA protein; 2635576, 97.9 4.5E-05 1.5E-09 75.8 11.6 138 298-440 38-251 (346)
426 3f7w_A Putative fructosamine-3 97.9 5.4E-05 1.9E-09 73.3 11.0 78 294-375 17-97 (288)
427 3e4g_A ATP synthase subunit S, 97.8 2.7E-06 9.3E-11 74.8 0.1 83 106-188 62-150 (176)
428 3jr1_A Putative fructosamine-3 97.8 0.00019 6.7E-09 69.9 12.6 136 297-437 41-232 (312)
429 1pgv_A TMD-1, tropomodulin TMD 97.7 1E-05 3.4E-10 72.6 2.7 107 36-142 37-170 (197)
430 1pgv_A TMD-1, tropomodulin TMD 97.7 7.9E-06 2.7E-10 73.3 0.8 107 60-166 37-170 (197)
431 3e4g_A ATP synthase subunit S, 97.6 7.4E-06 2.5E-10 72.0 0.3 86 64-166 61-153 (176)
432 2yle_A Protein spire homolog 1 97.6 0.00037 1.3E-08 62.7 11.0 102 374-493 34-135 (229)
433 2pyw_A Uncharacterized protein 97.5 0.00039 1.3E-08 71.1 11.2 80 410-491 231-313 (420)
434 3dxq_A Choline/ethanolamine ki 97.5 0.00061 2.1E-08 66.2 11.3 127 297-440 23-201 (301)
435 2ppq_A HSK, HK, homoserine kin 97.4 0.00042 1.4E-08 68.1 9.6 157 281-440 6-216 (322)
436 3rfe_A Platelet glycoprotein I 97.4 0.00025 8.6E-09 59.3 6.2 35 65-99 32-67 (130)
437 3rfe_A Platelet glycoprotein I 97.3 0.0003 1E-08 58.8 6.0 34 108-141 34-67 (130)
438 1nw1_A Choline kinase (49.2 KD 97.3 0.00056 1.9E-08 70.1 8.4 72 298-375 79-159 (429)
439 3csv_A Aminoglycoside phosphot 97.2 0.0023 7.9E-08 63.1 12.4 138 298-440 24-216 (333)
440 1zyl_A Hypothetical protein YI 97.1 0.0065 2.2E-07 59.6 14.6 156 281-440 10-222 (328)
441 2qg7_A Ethanolamine kinase PV0 97.1 0.0019 6.4E-08 66.5 10.8 74 297-375 113-188 (458)
442 3feg_A Choline/ethanolamine ki 97.1 0.002 7E-08 64.4 10.8 138 298-440 56-253 (379)
443 3c5i_A Choline kinase; choline 96.9 0.0019 6.3E-08 64.8 8.1 73 298-375 39-121 (369)
444 3i1a_A Spectinomycin phosphotr 96.6 0.018 6E-07 56.8 12.6 67 302-375 33-108 (339)
445 3f2s_A CK, chetk-alpha, cholin 96.5 0.01 3.5E-07 59.6 9.8 139 298-440 58-279 (401)
446 3mes_A Choline kinase; malaria 96.0 0.018 6E-07 58.5 9.1 137 298-440 76-290 (424)
447 3g15_A CK, chetk-alpha, cholin 92.6 0.31 1.1E-05 49.0 8.6 29 412-440 245-279 (401)
448 2ks1_B Epidermal growth factor 90.5 0.46 1.6E-05 30.4 4.5 23 240-262 16-38 (44)
449 4ann_A ESSB; membrane protein, 88.3 1.3 4.4E-05 39.7 7.5 121 346-500 43-163 (215)
450 2jwa_A Receptor tyrosine-prote 84.4 1 3.5E-05 28.7 3.3 27 236-262 12-38 (44)
451 4ano_A ESSB; membrane protein, 81.1 6 0.00021 35.5 8.5 115 346-496 48-164 (219)
452 2l2t_A Receptor tyrosine-prote 80.0 2.8 9.5E-05 26.7 4.1 17 245-261 20-36 (44)
453 2lz0_A Uncharacterized protein 78.5 4.8 0.00016 31.1 6.1 46 28-74 8-53 (100)
454 2k1k_A Ephrin type-A receptor 78.3 1.7 5.7E-05 26.9 2.7 16 235-250 10-25 (38)
455 3cxl_A N-chimerin; SH2, RHO-GA 75.3 0.35 1.2E-05 49.6 -1.6 60 296-358 146-214 (463)
456 2lz0_A Uncharacterized protein 72.2 5 0.00017 31.0 4.7 45 4-49 8-52 (100)
457 2x6h_A GH13170P, VPS34, phosph 48.2 1.5E+02 0.0053 31.5 12.2 45 389-440 529-575 (696)
458 3ls8_A Phosphatidylinositol 3- 47.2 1.7E+02 0.0058 30.6 12.2 81 352-440 403-501 (614)
459 3hhm_A Phosphatidylinositol-4, 31.5 1.7E+02 0.0058 32.9 9.6 61 373-440 898-961 (1091)
460 3pk1_B Apoptosis regulator BAX 22.8 1E+02 0.0036 18.0 3.2 21 558-578 7-27 (34)
461 1cja_A Protein (actin-fragmin 22.7 1.5E+02 0.0052 28.3 6.4 76 362-441 156-237 (342)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.7e-57 Score=446.40 Aligned_cols=259 Identities=29% Similarity=0.457 Sum_probs=217.0
Q ss_pred cCCCcCceeccccCceEEEEEeC------CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceee
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKAL 365 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 365 (580)
++|.+.+.||+|+||+||+|++. +++.||||+++.......+.|.+|++++++++|||||+++|+|.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 46778899999999999999864 477899999976655667889999999999999999999999999999999
Q ss_pred EeeccCCCChHHHhhcCC------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEE
Q 038098 366 VLEYMPHGSLEKCLYSSN------------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHL 433 (580)
Q Consensus 366 v~e~~~~g~L~~~l~~~~------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl 433 (580)
|||||++|+|.++++..+ ..++|.+++.++.|||+||+||| +++|+||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence 999999999999997643 46999999999999999999999 899999999999999999999999
Q ss_pred ccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhc
Q 038098 434 SDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLL 512 (580)
Q Consensus 434 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 512 (580)
+|||+|+.....+.........||+.|||||.+.++.++.++|||||||++|||+| |+.||.+... ..+...
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~--~~~~~~----- 242 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--NEVIEC----- 242 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--HHHHHH-----
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHH-----
Confidence 99999987655444434445579999999999999999999999999999999999 8999876311 111111
Q ss_pred ccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 038098 513 PISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDS 573 (580)
Q Consensus 513 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~ 573 (580)
+... .+...+..++.++.+|+.+||+.||++||||+||++.|+++.+.
T Consensus 243 ------i~~~-------~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 243 ------ITQG-------RVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp ------HHHT-------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ------HHcC-------CCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 1110 11233456788999999999999999999999999999887653
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=6e-57 Score=448.60 Aligned_cols=258 Identities=28% Similarity=0.455 Sum_probs=209.1
Q ss_pred cCCCcCceeccccCceEEEEEeC------CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceee
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKAL 365 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 365 (580)
++|.+.+.||+|+||.||+|+++ +++.||||+++.......+.|.+|++++++++|||||+++|+|.+.+..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45667789999999999999864 478899999976655566789999999999999999999999999999999
Q ss_pred EeeccCCCChHHHhhcCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcE
Q 038098 366 VLEYMPHGSLEKCLYSSN--------------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVA 431 (580)
Q Consensus 366 v~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~ 431 (580)
|||||++|+|.++++..+ .+++|.+++.++.|||+||+||| +.+|+||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence 999999999999987542 46999999999999999999999 8999999999999999999999
Q ss_pred EEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHh
Q 038098 432 HLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVND 510 (580)
Q Consensus 432 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~ 510 (580)
||+|||+|+.+...+.........||+.|||||++.+..++.++|||||||++|||+| |+.||..... .....
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~--~~~~~---- 271 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN--TEAID---- 271 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH--HHHHH----
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH--HHHHH----
Confidence 9999999997655444444455679999999999999999999999999999999999 8999875311 11111
Q ss_pred hcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 038098 511 LLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRD 572 (580)
Q Consensus 511 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~ 572 (580)
.+.. ..+...+..+++++.+|+.+||+.||++||||+||+++|+.+.+
T Consensus 272 -------~i~~-------g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 272 -------CITQ-------GRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp -------HHHH-------TCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred -------HHHc-------CCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 1111 01223445678899999999999999999999999999998865
No 3
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=8.2e-57 Score=441.31 Aligned_cols=263 Identities=28% Similarity=0.414 Sum_probs=209.0
Q ss_pred cCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeec
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEY 369 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 369 (580)
+++.+.+.||+|+||+||+|+++ ..||||+++... .+..+.|.+|++++++++|||||+++|++.+ +..++||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 56778899999999999999876 369999986432 3345789999999999999999999999865 568999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCcc
Q 038098 370 MPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSL 449 (580)
Q Consensus 370 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 449 (580)
|++|+|.++++..+..+++.+++.++.|||+||+||| +.+|+||||||+|||+++++.+||+|||+|+.........
T Consensus 113 ~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 9999999999887778999999999999999999999 8999999999999999999999999999998764433333
Q ss_pred cccccccCCCcCCcccccC---CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccC
Q 038098 450 TQTQTLATIGYMAPEYGRE---GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLS 526 (580)
Q Consensus 450 ~~~~~~~~~~y~aPE~~~~---~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 526 (580)
......||+.|||||++.+ +.++.++|||||||++|||+||+.||.+.... ......+. .....
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~-~~~~~~~~------------~~~~~ 256 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR-DQIIFMVG------------RGYAS 256 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-HHHHHHHH------------TTCCC
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH-HHHHHHHh------------cCCCC
Confidence 4456689999999999863 46899999999999999999999999753211 01111111 11000
Q ss_pred CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038098 527 QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575 (580)
Q Consensus 527 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~ 575 (580)
. .....+..++.++.+|+.+||+.||++||||+||+++|+.++..+.
T Consensus 257 p--~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp 303 (307)
T 3omv_A 257 P--DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp C--CSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred C--CcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence 0 0112335678889999999999999999999999999998876543
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=7.8e-57 Score=443.55 Aligned_cols=255 Identities=25% Similarity=0.423 Sum_probs=213.2
Q ss_pred CCCcCceeccccCceEEEEEeC------CCCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceee
Q 038098 293 GFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKAL 365 (580)
Q Consensus 293 ~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 365 (580)
+++..+.||+|+||+||+|.+. +++.||||+++... ....+.|.+|+.++++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3556788999999999999863 46789999996543 3345789999999999999999999999999999999
Q ss_pred EeeccCCCChHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCc
Q 038098 366 VLEYMPHGSLEKCLYSSN---------------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMV 430 (580)
Q Consensus 366 v~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~ 430 (580)
|||||++|+|.+++.... ..++|..++.++.|||+||+||| +.+|+||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCCC
Confidence 999999999999996532 45899999999999999999999 899999999999999999999
Q ss_pred EEEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHH
Q 038098 431 AHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVN 509 (580)
Q Consensus 431 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~ 509 (580)
+||+|||+|+.....+.........||+.|||||++.++.++.++|||||||++|||+| |+.||.+... ..+...
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~--~~~~~~-- 259 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--QDVVEM-- 259 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH--HHHHHH--
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH--HHHHHH--
Confidence 99999999987655444444456679999999999999999999999999999999999 8999875311 111111
Q ss_pred hhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 038098 510 DLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570 (580)
Q Consensus 510 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~ 570 (580)
+.. ..+.+.+..++.++.+|+.+||+.||++||||+||+++|+++
T Consensus 260 ----------i~~------~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 260 ----------IRN------RQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp ----------HHT------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ----------HHc------CCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 111 112234567888999999999999999999999999999865
No 5
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=3.8e-55 Score=434.68 Aligned_cols=250 Identities=25% Similarity=0.319 Sum_probs=212.7
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeecc
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEYM 370 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 370 (580)
..|+..+.||+|+||.||+|+.+ +|+.||||+++.......+.+.+|++++++++|||||++++++.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 45888899999999999999865 79999999998766666678899999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCccc
Q 038098 371 PHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLT 450 (580)
Q Consensus 371 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 450 (580)
+||+|.+++... .+++..+..++.||+.||+||| +.+|+||||||+|||++.+|.+||+|||+|+.+..... .
T Consensus 154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~--~ 226 (346)
T 4fih_A 154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--R 226 (346)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC--C
T ss_pred CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC--c
Confidence 999999998764 4899999999999999999999 99999999999999999999999999999987643322 3
Q ss_pred ccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCCccc
Q 038098 451 QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDE 530 (580)
Q Consensus 451 ~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 530 (580)
....+||+.|||||++.+..|+.++||||+||++|||++|++||.+.. ....+ ..+.+ ....
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~----~~~~~---------~~i~~-----~~~~ 288 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP----PLKAM---------KMIRD-----NLPP 288 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC----HHHHH---------HHHHH-----SSCC
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC----HHHHH---------HHHHc-----CCCC
Confidence 345689999999999999999999999999999999999999996521 11110 00111 1111
Q ss_pred ccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 531 HFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 531 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
....+..+++++.+|+.+||+.||++|||++|+++|
T Consensus 289 ~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 289 RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 223345677889999999999999999999999876
No 6
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=7.6e-55 Score=433.23 Aligned_cols=250 Identities=21% Similarity=0.326 Sum_probs=204.3
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEee
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 368 (580)
++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 67999999999999999999865 79999999997542 2345678999999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCC
Q 038098 369 YMPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 369 ~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 447 (580)
||+||+|.+++...+ ..+++..++.++.||+.||+||| +.+|+||||||+|||++.+|.+||+|||+|+.+...
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-- 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-- 178 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH--
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCC--
Confidence 999999999997654 46799999999999999999999 999999999999999999999999999999865321
Q ss_pred cccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCC
Q 038098 448 SLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQ 527 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 527 (580)
.......+||+.|||||++.+..++.++||||+||++|||+||+.||.+.. ..+... .+....
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----~~~~~~--------~i~~~~---- 241 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-----MKNLVL--------KIISGS---- 241 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHH--------HHHHTC----
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----HHHHHH--------HHHcCC----
Confidence 112345679999999999999999999999999999999999999997521 111111 111111
Q ss_pred cccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 528 KDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 528 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
. ...+..++.++.+|+.+||+.||++|||++|+++|
T Consensus 242 ~---~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 242 F---PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp C---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred C---CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 01234567889999999999999999999999876
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.9e-54 Score=428.46 Aligned_cols=257 Identities=22% Similarity=0.257 Sum_probs=211.0
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeecc
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEYM 370 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 370 (580)
+.|...+.||+|+||.||+|+++ +|+.||||+++.+.. ..+|+.++++++|||||++++++.+++..++|||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 45777889999999999999865 699999999975422 246999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCC-cEEEccccCccccCCCCCcc
Q 038098 371 PHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM-VAHLSDFGMAKPLLKEDQSL 449 (580)
Q Consensus 371 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~-~~kl~Dfg~a~~~~~~~~~~ 449 (580)
+||+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+|||++.+| .+||+|||+|+.+.......
T Consensus 133 ~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 133 EGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp TTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred CCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 9999999997654 5999999999999999999999 99999999999999999988 59999999998765433211
Q ss_pred ---cccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccC
Q 038098 450 ---TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLS 526 (580)
Q Consensus 450 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 526 (580)
.....+||+.|||||++.+..++.++||||+||++|||+||+.||.+...... ...... .
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~i~~------------~---- 271 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-CLKIAS------------E---- 271 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-HHHHHH------------S----
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHHHc------------C----
Confidence 22345799999999999999999999999999999999999999976432211 111111 0
Q ss_pred CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038098 527 QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575 (580)
Q Consensus 527 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~ 575 (580)
.......+..+++++.+++.+||+.||++|||+.|++++|.+...+..
T Consensus 272 -~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 272 -PPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp -CCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred -CCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence 001112345677889999999999999999999999999998877643
No 8
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.9e-54 Score=427.75 Aligned_cols=277 Identities=23% Similarity=0.299 Sum_probs=203.4
Q ss_pred cCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCC----ceeeEe
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDD----FKALVL 367 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~lv~ 367 (580)
.+|.+.+.||+|+||+||+|+++ |+.||||+++..... ......|+..+.+++|||||+++++|.+++ ..+|||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 34677889999999999999985 899999999654221 122344666667889999999999997654 578999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeEEecCCCCCEEeCCCCcEEEccccCcccc
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFG-----YSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL 442 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-----~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~ 442 (580)
|||++|+|.++++.. .++|..+++++.|+++||+|||.. ...+|+||||||+|||++.++++||+|||+|+..
T Consensus 81 Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp ECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred cCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 999999999999764 489999999999999999999932 1239999999999999999999999999999866
Q ss_pred CCCCCc--ccccccccCCCcCCcccccCC------CCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcc-
Q 038098 443 LKEDQS--LTQTQTLATIGYMAPEYGREG------QVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLP- 513 (580)
Q Consensus 443 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~------~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~- 513 (580)
...... .......||+.|||||++.+. .++.++|||||||++|||+||++|+............+......
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 433322 122345799999999998654 46789999999999999999998876533222211111100000
Q ss_pred cchhh-hcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 038098 514 ISVME-IVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDS 573 (580)
Q Consensus 514 ~~~~~-~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~ 573 (580)
..+.. +.+...... .+......+++..+.+|+.+||+.||++||||+||++.|+++.++
T Consensus 239 ~~~~~~~~~~~~rp~-~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 239 EEMRKVVCEQKLRPN-IPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHTTSCCCCC-CCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcccCCCC-CCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 00111 111111111 111112235677899999999999999999999999999998765
No 9
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.2e-54 Score=424.78 Aligned_cols=250 Identities=24% Similarity=0.348 Sum_probs=211.6
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecc---ccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQ---YGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
++|++.+.||+|+||+||+|+.. +|+.||||++... .....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 56999999999999999999865 7999999999754 2344577899999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 447 (580)
||++||+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 112 Ey~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 9999999999997654 5999999999999999999999 99999999999999999999999999999997755444
Q ss_pred cccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCC
Q 038098 448 SLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQ 527 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 527 (580)
.......+||+.|||||++.+..++.++||||+||++|||+||+.||.+.. ...... .+.. .
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-----~~~~~~--------~i~~----~- 249 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN-----EGLIFA--------KIIK----L- 249 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHH--------HHHH----T-
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHH--------HHHc----C-
Confidence 444556789999999999999999999999999999999999999996521 111111 1111 1
Q ss_pred cccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 528 KDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 528 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
....+..+++++.+|+.+||+.||++|||++|+..+
T Consensus 250 ---~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 250 ---EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred ---CCCCCcccCHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 111234567789999999999999999999987543
No 10
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=3e-54 Score=432.56 Aligned_cols=265 Identities=23% Similarity=0.379 Sum_probs=218.1
Q ss_pred HHHHhcCCCcCceeccccCceEEEEEeCC------CCEEEEEEEecccc-chhhhHHHHHHHHhhcCC-CCcceEEeeee
Q 038098 287 IFQATNGFSENNLIGRGGFGSVYKARIQD------GMEVAVKVFDLQYG-RAFKSFDIECDMIKRIRH-RNIIKIISSCS 358 (580)
Q Consensus 287 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h-~niv~~~~~~~ 358 (580)
.+...++|++.+.||+|+||+||+|.+.. ++.||||++..... ...+.+.+|++++++++| ||||+++|+|.
T Consensus 59 wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~ 138 (353)
T 4ase_A 59 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 138 (353)
T ss_dssp HBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEE
Confidence 33345789999999999999999998642 35799999965433 345678999999999965 89999999986
Q ss_pred cC-CceeeEeeccCCCChHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCC
Q 038098 359 SD-DFKALVLEYMPHGSLEKCLYSSN---------------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSN 422 (580)
Q Consensus 359 ~~-~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~N 422 (580)
+. +..++|||||++|+|.++++..+ ..+++..++.++.|||+||+||| +++|+||||||+|
T Consensus 139 ~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~~N 215 (353)
T 4ase_A 139 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARN 215 (353)
T ss_dssp CTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGG
T ss_pred ecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccCccc
Confidence 64 56899999999999999997532 35899999999999999999999 9999999999999
Q ss_pred EEeCCCCcEEEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCC
Q 038098 423 VLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGD 501 (580)
Q Consensus 423 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~ 501 (580)
||+++++.+||+|||+|+.+.............||+.|||||++.+..++.++|||||||++|||+| |+.||.+.....
T Consensus 216 ILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~ 295 (353)
T 4ase_A 216 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 295 (353)
T ss_dssp EEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred eeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH
Confidence 9999999999999999997755544444556679999999999999999999999999999999998 999997632111
Q ss_pred chHHHHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 038098 502 MTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDS 573 (580)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~ 573 (580)
.+. ..+... .+...+..+++++.+++.+||+.||++||||+||+++|+++.+.
T Consensus 296 -~~~------------~~i~~g------~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 296 -EFC------------RRLKEG------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp -HHH------------HHHHHT------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -HHH------------HHHHcC------CCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 111 111111 12233456788899999999999999999999999999998764
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=7.5e-54 Score=435.82 Aligned_cols=250 Identities=25% Similarity=0.319 Sum_probs=212.5
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeecc
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEYM 370 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 370 (580)
+.|+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+++|++++|||||++++++.+++..|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 46889999999999999999865 79999999998766666678999999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCccc
Q 038098 371 PHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLT 450 (580)
Q Consensus 371 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 450 (580)
+||+|.+++... .+++..+..++.||+.||+||| +.+|+||||||+|||++.+|.+||+|||+|+.+..... .
T Consensus 231 ~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~--~ 303 (423)
T 4fie_A 231 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--R 303 (423)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC--C
T ss_pred CCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc--c
Confidence 999999998754 4899999999999999999999 99999999999999999999999999999987643322 3
Q ss_pred ccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCCccc
Q 038098 451 QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDE 530 (580)
Q Consensus 451 ~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 530 (580)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.. ....+ ..+.+ ....
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~----~~~~~---------~~i~~-----~~~~ 365 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP----PLKAM---------KMIRD-----NLPP 365 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC----HHHHH---------HHHHH-----SCCC
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC----HHHHH---------HHHHc-----CCCC
Confidence 345689999999999999999999999999999999999999996521 11110 00110 0111
Q ss_pred ccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 531 HFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 531 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
....+..++.++.+|+.+||..||++|||++|+++|
T Consensus 366 ~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 366 RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp CCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 223334567889999999999999999999999886
No 12
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3.9e-53 Score=412.23 Aligned_cols=245 Identities=25% Similarity=0.346 Sum_probs=197.6
Q ss_pred CcCceeccccCceEEEEEeC-CCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeec----CCceeeEe
Q 038098 295 SENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSS----DDFKALVL 367 (580)
Q Consensus 295 ~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~ 367 (580)
...+.||+|+||+||+|.+. +++.||+|++.... ....+.+.+|++++++++|||||++++++.+ ++..++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45567999999999999865 68999999996542 2345678999999999999999999999864 34679999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEEecCCCCCEEeC-CCCcEEEccccCccccCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP--IIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLK 444 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~--i~H~dlk~~Nill~-~~~~~kl~Dfg~a~~~~~ 444 (580)
|||++|+|.+++... ..+++..+..++.||+.||+||| +.+ |+||||||+|||++ .++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp ECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred eCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 999999999999764 46999999999999999999999 777 99999999999998 489999999999985422
Q ss_pred CCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhc
Q 038098 445 EDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANL 524 (580)
Q Consensus 445 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 524 (580)
......+||+.|||||++.+ .++.++|||||||++|||+||+.||..... ....... +...
T Consensus 185 ----~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~----~~~~~~~---------i~~~- 245 (290)
T 3fpq_A 185 ----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN----AAQIYRR---------VTSG- 245 (290)
T ss_dssp ----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS----HHHHHHH---------HTTT-
T ss_pred ----CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc----HHHHHHH---------HHcC-
Confidence 12345679999999998864 699999999999999999999999964211 1111111 1000
Q ss_pred cCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 525 LSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 525 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.. ....+..+++++.+|+.+||+.||++|||++|+++|
T Consensus 246 --~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 246 --VK--PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp --CC--CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred --CC--CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00 111223456778999999999999999999999875
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.4e-53 Score=409.98 Aligned_cols=246 Identities=24% Similarity=0.375 Sum_probs=193.5
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc---cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY---GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
++|++.+.||+|+||+||+|+.. +|+.||||+++... ......+.+|++++++++|||||++++++.+++..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 68999999999999999999864 79999999996542 233567899999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 447 (580)
||+ +|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+|||+++++.+||+|||+|+......
T Consensus 93 Ey~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~- 166 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN- 166 (275)
T ss_dssp ECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred eCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC-
Confidence 999 679999987654 5999999999999999999999 9999999999999999999999999999998653322
Q ss_pred cccccccccCCCcCCcccccCCCC-CCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccC
Q 038098 448 SLTQTQTLATIGYMAPEYGREGQV-STNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLS 526 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 526 (580)
.....+||+.|||||++.+..+ +.++||||+||++|||+||+.||.... ....... +...
T Consensus 167 --~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~-----~~~~~~~--------i~~~---- 227 (275)
T 3hyh_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFKN--------ISNG---- 227 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHH--------HHHT----
T ss_pred --ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC-----HHHHHHH--------HHcC----
Confidence 2345679999999999988775 589999999999999999999996521 1111111 1110
Q ss_pred CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 527 QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 527 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
....+..+++++.+|+.+||+.||++|||++|+++|
T Consensus 228 ----~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 228 ----VYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ----CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred ----CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 111233467788999999999999999999999986
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.2e-53 Score=414.78 Aligned_cols=248 Identities=25% Similarity=0.336 Sum_probs=199.3
Q ss_pred cCCCcCceeccccCceEEEEEeC----CCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceee
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKAL 365 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 365 (580)
++|++.+.||+|+||+||+|+.. +++.||||+++... ......+.+|++++++++|||||++++++.+++..++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 56999999999999999999752 47889999996542 2234568889999999999999999999999999999
Q ss_pred EeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCC
Q 038098 366 VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE 445 (580)
Q Consensus 366 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 445 (580)
|||||+||+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+|||++.+|.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 999999999999997654 5999999999999999999999 999999999999999999999999999999865332
Q ss_pred CCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhcc
Q 038098 446 DQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLL 525 (580)
Q Consensus 446 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 525 (580)
. ......+||+.|||||++.+..++.++||||+||++|||+||+.||.+... .+... .+...
T Consensus 180 ~--~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-----~~~~~--------~i~~~--- 241 (304)
T 3ubd_A 180 E--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-----KETMT--------MILKA--- 241 (304)
T ss_dssp ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH--------HHHHC---
T ss_pred C--ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH-----HHHHH--------HHHcC---
Confidence 2 223456799999999999999999999999999999999999999975211 11111 11110
Q ss_pred CCcccccchhhhhHHHHHHHHhhccCCCCCCCCCH-----HHHHHH
Q 038098 526 SQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINA-----KEIVTR 566 (580)
Q Consensus 526 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~-----~ev~~~ 566 (580)
....+..+++++.+|+.+||+.||++|||+ +|+++|
T Consensus 242 -----~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 242 -----KLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp -----CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred -----CCCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 112234567889999999999999999984 677764
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.4e-51 Score=402.37 Aligned_cols=250 Identities=22% Similarity=0.364 Sum_probs=190.2
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc-chhhhHHHHHHHHhhcCCCCcceEEeeeecCC--------
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG-RAFKSFDIECDMIKRIRHRNIIKIISSCSSDD-------- 361 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-------- 361 (580)
++|++.+.||+|+||+||+|+.+ +|+.||||++..... ...+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 35888999999999999999865 799999999975433 33467889999999999999999999986544
Q ss_pred ----ceeeEeeccCCCChHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEcc
Q 038098 362 ----FKALVLEYMPHGSLEKCLYSSN--YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSD 435 (580)
Q Consensus 362 ----~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~D 435 (580)
..++||||+++|+|.+++.... ...++..++.++.||++||+||| +.+|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 3689999999999999998655 34567788999999999999999 99999999999999999999999999
Q ss_pred ccCccccCCCCCc----------ccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHH
Q 038098 436 FGMAKPLLKEDQS----------LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505 (580)
Q Consensus 436 fg~a~~~~~~~~~----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~ 505 (580)
||+|+.+...... ...+..+||+.|||||++.+..++.++||||+||++|||++ ||.... ...
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~----~~~ 234 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM----ERV 234 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH----HHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc----HHH
Confidence 9999876433211 11234579999999999999999999999999999999996 764311 100
Q ss_pred HHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 506 HWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 506 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.... .+.+ .. ........++.+.+|+.+||+.||++|||+.|+++|
T Consensus 235 ~~~~--------~~~~----~~---~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 235 RTLT--------DVRN----LK---FPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHH--------HHHT----TC---CCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHH--------HHhc----CC---CCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0000 0000 00 011223344567889999999999999999999885
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.4e-49 Score=399.96 Aligned_cols=269 Identities=25% Similarity=0.286 Sum_probs=203.0
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc--chhhhHHHHHHHHhhcCCCCcceEEeeeec------CCc
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG--RAFKSFDIECDMIKRIRHRNIIKIISSCSS------DDF 362 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~ 362 (580)
++|++.+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999999865 799999999964422 334678899999999999999999998753 367
Q ss_pred eeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCcccc
Q 038098 363 KALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL 442 (580)
Q Consensus 363 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~ 442 (580)
.|+|||||+ |+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEeCCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 899999996 6899988764 46999999999999999999999 999999999999999999999999999999876
Q ss_pred CCCC--CcccccccccCCCcCCcccccCC-CCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhc--ccch-
Q 038098 443 LKED--QSLTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLL--PISV- 516 (580)
Q Consensus 443 ~~~~--~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~--~~~~- 516 (580)
.... ........+||+.|||||++.+. .++.++||||+||++|||++|++||.+.... ..+........ +...
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~-~~l~~I~~~~g~p~~~~~ 287 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV-HQLQLIMMVLGTPSPAVI 287 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHHHHHCCCCGGGT
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhcCCCChHHh
Confidence 4332 12234456899999999998775 5699999999999999999999999753111 01111111100 0000
Q ss_pred --------hhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 517 --------MEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 517 --------~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
...+..................+.++.+|+.+||..||++|||++|+++|
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp C-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000000000000111123456788999999999999999999999875
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.1e-48 Score=393.00 Aligned_cols=268 Identities=21% Similarity=0.275 Sum_probs=200.7
Q ss_pred HhcCCCcCceeccccCceEEEEEeC----CCCEEEEEEEeccccchhhhHHHHHHHHhhc-CCCCcceEEeeeecCCcee
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFDLQYGRAFKSFDIECDMIKRI-RHRNIIKIISSCSSDDFKA 364 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 364 (580)
..+.|++.+.||+|+||+||+|+.+ +++.||+|++... .....+.+|+++++.+ +||||+++++++.+.+..+
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~ 96 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV 96 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence 4578999999999999999999753 4678999998644 2345678899999998 6999999999999999999
Q ss_pred eEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCC-CcEEEccccCccccC
Q 038098 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN-MVAHLSDFGMAKPLL 443 (580)
Q Consensus 365 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~-~~~kl~Dfg~a~~~~ 443 (580)
+||||+++|+|.+++. .+++.++..++.||+.||+||| +.+|+||||||+|||++.+ +.+||+|||+|+...
T Consensus 97 lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~ 169 (361)
T 4f9c_A 97 IAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH 169 (361)
T ss_dssp EEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECT
T ss_pred EEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccC
Confidence 9999999999999884 4899999999999999999999 9999999999999999876 899999999998653
Q ss_pred CCCCc--------------------------ccccccccCCCcCCcccccCC-CCCCchhhHhHHHHHHHHHhCCCCCCc
Q 038098 444 KEDQS--------------------------LTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDE 496 (580)
Q Consensus 444 ~~~~~--------------------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dvws~Gvil~elltg~~p~~~ 496 (580)
..... ......+||+.|+|||++.+. .++.++||||+||++|||+||+.||..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249 (361)
T ss_dssp TCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred CccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence 32110 112345799999999998775 589999999999999999999999854
Q ss_pred cccCCchHHHHHH------------hh----------cccchhhhcchh---------cc---CCcccccchhhhhHHHH
Q 038098 497 IFFGDMTLKHWVN------------DL----------LPISVMEIVDAN---------LL---SQKDEHFTTKGQCVSFI 542 (580)
Q Consensus 497 ~~~~~~~~~~~~~------------~~----------~~~~~~~~~d~~---------~~---~~~~~~~~~~~~~~~~l 542 (580)
.......+..... .. ............ .. .............++++
T Consensus 250 ~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a 329 (361)
T 4f9c_A 250 ASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEA 329 (361)
T ss_dssp CSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHH
T ss_pred CCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHH
Confidence 2111111111110 00 000000000000 00 00000111234566788
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHH
Q 038098 543 FNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 543 ~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.+|+.+||+.||++|||++|+++|
T Consensus 330 ~DLl~~lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 330 YDLLDKLLDLNPASRITAEEALLH 353 (361)
T ss_dssp HHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHCcCChhHCcCHHHHhcC
Confidence 999999999999999999999876
No 18
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=5.2e-48 Score=413.47 Aligned_cols=253 Identities=17% Similarity=0.236 Sum_probs=212.6
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeec
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEY 369 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 369 (580)
.++|++.+.||+|+||.||+|..+ +|+.||+|++........+.+.+|+++|+.++|||||++++++.+.+..++||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 367999999999999999999865 7999999999765555567788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCC--CcEEEccccCccccCCCCC
Q 038098 370 MPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN--MVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 370 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~--~~~kl~Dfg~a~~~~~~~~ 447 (580)
|+||+|.+++......+++..+..++.||+.||+||| +.+|+||||||+|||++.+ +.+||+|||+|+.+....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~- 311 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ- 311 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS-
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC-
Confidence 9999999999877777999999999999999999999 9999999999999999854 899999999999764322
Q ss_pred cccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCC
Q 038098 448 SLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQ 527 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 527 (580)
.....+||+.|||||++.+..++.++||||+||++|||++|+.||.+... . .... .+. ...
T Consensus 312 --~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~----~-~~~~--------~i~----~~~ 372 (573)
T 3uto_A 312 --SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND----D-ETLR--------NVK----SCD 372 (573)
T ss_dssp --EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH----H-HHHH--------HHH----TTC
T ss_pred --ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH----H-HHHH--------HHH----hCC
Confidence 23456799999999999999999999999999999999999999975211 0 1000 011 011
Q ss_pred cccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 528 KDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 528 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
..........++.++.+|+.+||+.||++|||++|+++|
T Consensus 373 ~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 373 WNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp CCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111112234567889999999999999999999999986
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=9.1e-48 Score=408.18 Aligned_cols=249 Identities=24% Similarity=0.306 Sum_probs=201.8
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc---cchhhhHHH---HHHHHhhcCCCCcceEEeeeecCCcee
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY---GRAFKSFDI---ECDMIKRIRHRNIIKIISSCSSDDFKA 364 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~---e~~~l~~l~h~niv~~~~~~~~~~~~~ 364 (580)
++|++.++||+|+||.||+|+.+ +|+.||||+++... ......... ++.+++.++|||||++++++.+.+..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 56999999999999999999865 69999999996532 122223333 456677789999999999999999999
Q ss_pred eEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCC
Q 038098 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLK 444 (580)
Q Consensus 365 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 444 (580)
+||||++||+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+|||++.+|.+||+|||+|+.+..
T Consensus 269 lVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp EEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 9999999999999997654 5999999999999999999999 99999999999999999999999999999987643
Q ss_pred CCCcccccccccCCCcCCcccccC-CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchh
Q 038098 445 EDQSLTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDAN 523 (580)
Q Consensus 445 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 523 (580)
.. ....+||+.|||||++.. ..++.++||||+||++|||++|++||.+....+ ...... ..
T Consensus 345 ~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~--~~~i~~------------~i 406 (689)
T 3v5w_A 345 KK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEIDR------------MT 406 (689)
T ss_dssp CC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC--HHHHHH------------HH
T ss_pred CC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHH------------hh
Confidence 22 234689999999999975 578999999999999999999999997532211 111111 00
Q ss_pred ccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCC-----HHHHHHH
Q 038098 524 LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRIN-----AKEIVTR 566 (580)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~ev~~~ 566 (580)
... ....+..++.++.+|+.+||+.||++|++ ++||++|
T Consensus 407 ~~~----~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 407 LTM----AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp HHC----CCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred cCC----CCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 000 11223456788999999999999999998 6888765
No 20
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=5e-47 Score=380.29 Aligned_cols=281 Identities=32% Similarity=0.524 Sum_probs=231.7
Q ss_pred CHHHHHHHhcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCc
Q 038098 283 TYLEIFQATNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDF 362 (580)
Q Consensus 283 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 362 (580)
++.++...+++|+..+.||+|+||.||+|.+++|+.||||++........+.+.+|++++++++||||+++++++...+.
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 109 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE 109 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTC
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCe
Confidence 33445557789999999999999999999988899999999876656667889999999999999999999999999999
Q ss_pred eeeEeeccCCCChHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCc
Q 038098 363 KALVLEYMPHGSLEKCLYSSN---YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMA 439 (580)
Q Consensus 363 ~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a 439 (580)
.++||||+++|+|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 186 (321)
T 2qkw_B 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGIS 186 (321)
T ss_dssp CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTTC
T ss_pred EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeecccc
Confidence 999999999999999987654 35899999999999999999999 899999999999999999999999999999
Q ss_pred cccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccC-CchHHHHHHhhccc-chh
Q 038098 440 KPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFG-DMTLKHWVNDLLPI-SVM 517 (580)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~-~~~~~~~~~~~~~~-~~~ 517 (580)
+...............||+.|+|||.+.++.++.++|||||||++|||+||+.||...... ......|....... ...
T Consensus 187 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (321)
T 2qkw_B 187 KKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266 (321)
T ss_dssp EECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCC
T ss_pred cccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHH
Confidence 8654333333334456899999999998889999999999999999999999999764332 23344444322211 122
Q ss_pred hhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 038098 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRD 572 (580)
Q Consensus 518 ~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~ 572 (580)
..+++... ......++..+.+++.+||+.||++||+++|++++|+.+.+
T Consensus 267 ~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 267 QIVDPNLA------DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp SSSSSSCT------TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhcChhhc------cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 22222211 12345678889999999999999999999999999998875
No 21
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3.1e-46 Score=375.44 Aligned_cols=287 Identities=36% Similarity=0.546 Sum_probs=234.6
Q ss_pred cccCCccCHHHHHHHhcCCCcCceeccccCceEEEEEeCCCCEEEEEEEecccc-chhhhHHHHHHHHhhcCCCCcceEE
Q 038098 276 ISNQRRFTYLEIFQATNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYG-RAFKSFDIECDMIKRIRHRNIIKII 354 (580)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~ 354 (580)
....+.+++.++....++|+..+.||+|+||.||+|...+|+.||||++..... .....+.+|++++++++||||++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 93 (326)
T 3uim_A 14 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR 93 (326)
T ss_dssp -CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCC
T ss_pred cCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceE
Confidence 345567899999999999999999999999999999988899999999865432 2334788999999999999999999
Q ss_pred eeeecCCceeeEeeccCCCChHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcE
Q 038098 355 SSCSSDDFKALVLEYMPHGSLEKCLYSSN---YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVA 431 (580)
Q Consensus 355 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~ 431 (580)
+++...+..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||..+..+|+||||||+||+++.++.+
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~ 173 (326)
T 3uim_A 94 GFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 173 (326)
T ss_dssp EEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCE
T ss_pred EEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCE
Confidence 99999999999999999999999998654 359999999999999999999993322399999999999999999999
Q ss_pred EEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCcc---ccCCchHHHHH
Q 038098 432 HLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEI---FFGDMTLKHWV 508 (580)
Q Consensus 432 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~---~~~~~~~~~~~ 508 (580)
||+|||+++....... .......||+.|+|||.+.+..++.++||||+||++|||+||+.||+.. .........|.
T Consensus 174 kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 252 (326)
T 3uim_A 174 VVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252 (326)
T ss_dssp EECCCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHH
T ss_pred EeccCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHH
Confidence 9999999986643322 2334456999999999998889999999999999999999999999742 12334456666
Q ss_pred Hhhcccc-hhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 038098 509 NDLLPIS-VMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLK 569 (580)
Q Consensus 509 ~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~ 569 (580)
....... .....+.... .......+..+.+++.+||+.||++|||++||+++|++
T Consensus 253 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 253 KGLLKEKKLEALVDVDLQ------GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TTTTSSCCSTTSSCTTCT------TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred HHHhhchhhhhhcChhhc------cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 5544332 3333333222 12335667889999999999999999999999999974
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.3e-46 Score=370.94 Aligned_cols=264 Identities=25% Similarity=0.388 Sum_probs=218.4
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeecc
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEYM 370 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 370 (580)
++|...+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 56888999999999999999865 68999999986555556678999999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCcc-
Q 038098 371 PHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSL- 449 (580)
Q Consensus 371 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~- 449 (580)
++|+|.+++......+++.+++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.........
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 90 KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp TTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 999999999887778999999999999999999999 8999999999999999999999999999998664332211
Q ss_pred -----------cccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhh
Q 038098 450 -----------TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVME 518 (580)
Q Consensus 450 -----------~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (580)
......||+.|+|||.+.+..++.++||||||+++|||++|..|+............ ....
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~--------~~~~ 238 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL--------NVRG 238 (310)
T ss_dssp -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSB--------CHHH
T ss_pred ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhh--------hhhc
Confidence 111456999999999999999999999999999999999999998653222111100 0111
Q ss_pred hcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 038098 519 IVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLK 576 (580)
Q Consensus 519 ~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~~ 576 (580)
..+. ..+..++..+.+++.+||+.||++||+++|+++.|+++...+..
T Consensus 239 ~~~~----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~ 286 (310)
T 3s95_A 239 FLDR----------YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG 286 (310)
T ss_dssp HHHH----------TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred cccc----------cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccC
Confidence 1111 01234556788999999999999999999999999999987654
No 23
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.7e-45 Score=364.61 Aligned_cols=251 Identities=25% Similarity=0.352 Sum_probs=211.3
Q ss_pred hcCCCcCceeccccCceEEEEEe-CCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeec
Q 038098 291 TNGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEY 369 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 369 (580)
.++|+..+.||+|+||.||+|.. .+|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 36799999999999999999985 47899999999876666667889999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCcc
Q 038098 370 MPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSL 449 (580)
Q Consensus 370 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 449 (580)
+++|+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 171 (297)
T 3fxz_A 99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 171 (297)
T ss_dssp CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC--
T ss_pred CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc--
Confidence 9999999998765 4899999999999999999999 89999999999999999999999999999986643322
Q ss_pred cccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCCcc
Q 038098 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKD 529 (580)
Q Consensus 450 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 529 (580)
......||+.|+|||.+.+..++.++||||+||++|||+||+.||..... ..... .+... ..
T Consensus 172 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~~~---------~~~~~-----~~ 233 (297)
T 3fxz_A 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP----LRALY---------LIATN-----GT 233 (297)
T ss_dssp CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH----HHHHH---------HHHHH-----CS
T ss_pred ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH----HHHHH---------HHHhC-----CC
Confidence 23455799999999999999999999999999999999999999865211 11100 00000 01
Q ss_pred cccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 530 EHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 530 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.....+..++..+.+++.+||+.||++|||++|+++|
T Consensus 234 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 234 PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1122345567889999999999999999999999875
No 24
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=9.5e-46 Score=370.94 Aligned_cols=276 Identities=24% Similarity=0.309 Sum_probs=212.4
Q ss_pred hcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCc----eeeE
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDF----KALV 366 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----~~lv 366 (580)
.++|++.+.||+|+||.||+|++. ++.||||++.... ........|+.++++++||||+++++++..... .++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 467889999999999999999886 7999999996543 233455668889999999999999999987543 6999
Q ss_pred eeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC----------CeEEecCCCCCEEeCCCCcEEEccc
Q 038098 367 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV----------PIIHCDLKPSNVLLDDNMVAHLSDF 436 (580)
Q Consensus 367 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~----------~i~H~dlk~~Nill~~~~~~kl~Df 436 (580)
|||+++|+|.+++.... +++..++.++.||++||+||| +. +|+||||||+||+++.++.+||+||
T Consensus 101 ~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 101 TAFHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EecCCCCCHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 99999999999997644 899999999999999999999 77 9999999999999999999999999
Q ss_pred cCccccCCCCCcccccccccCCCcCCcccccC-----CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCc-hHHHHHHh
Q 038098 437 GMAKPLLKEDQSLTQTQTLATIGYMAPEYGRE-----GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDM-TLKHWVND 510 (580)
Q Consensus 437 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~-~~~~~~~~ 510 (580)
|+++.+.............||+.|+|||.+.+ ..++.++|||||||++|||+||+.||........ ........
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 255 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence 99987654444333445679999999999876 3566789999999999999999999976432211 11111111
Q ss_pred hccc-chhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 038098 511 LLPI-SVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDS 573 (580)
Q Consensus 511 ~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~ 573 (580)
.... ...+.+.................++.++.+|+.+||+.||++|||++|+++.|+++.+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 256 HPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0000 01111111111111111112234677899999999999999999999999999998764
No 25
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.8e-45 Score=375.58 Aligned_cols=262 Identities=26% Similarity=0.429 Sum_probs=216.4
Q ss_pred hcCCCcCceeccccCceEEEEEeC--------CCCEEEEEEEeccc-cchhhhHHHHHHHHhhc-CCCCcceEEeeeecC
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ--------DGMEVAVKVFDLQY-GRAFKSFDIECDMIKRI-RHRNIIKIISSCSSD 360 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 360 (580)
.++|.+.+.||+|+||.||+|.+. ++..||||++.... ......+.+|+++++++ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 367888999999999999999752 35579999996543 23456788999999999 899999999999999
Q ss_pred CceeeEeeccCCCChHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEe
Q 038098 361 DFKALVLEYMPHGSLEKCLYSSN---------------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL 425 (580)
Q Consensus 361 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill 425 (580)
+..++||||+++|+|.+++...+ ..+++..++.++.||+.||+||| +.+|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence 99999999999999999998654 34899999999999999999999 8999999999999999
Q ss_pred CCCCcEEEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchH
Q 038098 426 DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTL 504 (580)
Q Consensus 426 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~ 504 (580)
+.++.+||+|||+++...............+|+.|+|||.+.+..++.++|||||||++|||+| |+.||...... ..
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~--~~ 314 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--EL 314 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HH
Confidence 9999999999999987654443333444567889999999999999999999999999999999 99998653211 11
Q ss_pred HHHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038098 505 KHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575 (580)
Q Consensus 505 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~ 575 (580)
.. .+... .+...+..++.++.+++.+||+.||++||++.|++++|+++.....
T Consensus 315 ~~------------~~~~~------~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~ 367 (370)
T 2psq_A 315 FK------------LLKEG------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367 (370)
T ss_dssp HH------------HHHTT------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HH------------HHhcC------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 11 11110 0112334567889999999999999999999999999999987653
No 26
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=9.1e-45 Score=363.44 Aligned_cols=262 Identities=24% Similarity=0.308 Sum_probs=216.8
Q ss_pred CccCHHHHHHHhcC----------CCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCC
Q 038098 280 RRFTYLEIFQATNG----------FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHR 348 (580)
Q Consensus 280 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ 348 (580)
..+++.++..+++. |...+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45788888877764 666778999999999999876 7999999999876666667889999999999999
Q ss_pred CcceEEeeeecCCceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCC
Q 038098 349 NIIKIISSCSSDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN 428 (580)
Q Consensus 349 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~ 428 (580)
||+++++++...+..++||||+++|+|.+++... .+++..+..++.||+.||+||| +.+|+||||||+||+++.+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLD 177 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCC
Confidence 9999999999999999999999999999988653 5899999999999999999999 8999999999999999999
Q ss_pred CcEEEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHH
Q 038098 429 MVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWV 508 (580)
Q Consensus 429 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~ 508 (580)
+.+||+|||++........ ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... .......
T Consensus 178 ~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~--~~~~~~~ 253 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP--VQAMKRL 253 (321)
T ss_dssp CCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHH
T ss_pred CcEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH
Confidence 9999999999986643222 23445799999999999999999999999999999999999999865211 0111111
Q ss_pred HhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 509 NDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 509 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.. ...........++.++.+++.+||+.||++||+++|+++|
T Consensus 254 ~~----------------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 254 RD----------------SPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HH----------------SSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hc----------------CCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 10 0111112234566789999999999999999999999986
No 27
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=5.7e-46 Score=380.65 Aligned_cols=261 Identities=28% Similarity=0.424 Sum_probs=215.8
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc-chhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEee
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG-RAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 368 (580)
.++|...+.||+|+||.||+|.+. +++.||||++..... .....+.+|++++++++||||+++++++...+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 356888899999999999999976 789999999865422 334578899999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCc
Q 038098 369 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS 448 (580)
Q Consensus 369 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 448 (580)
|+++|+|.+++...+..+++..++.++.||++||+||| +.+|+||||||+|||++.++.+||+|||+++........
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 99999999999877777999999999999999999999 899999999999999999999999999999865332221
Q ss_pred ccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhccCC
Q 038098 449 LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQ 527 (580)
Q Consensus 449 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 527 (580)
.......++..|+|||.+.++.++.++|||||||++|||+| |..||..... .... +.+...
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~--~~~~------------~~~~~~---- 331 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN--QQTR------------EFVEKG---- 331 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH--HHHH------------HHHHTT----
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHH------------HHHHcC----
Confidence 11222345778999999998899999999999999999999 9999865311 1111 111111
Q ss_pred cccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 038098 528 KDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574 (580)
Q Consensus 528 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~ 574 (580)
.+...+..++.++.+++.+||+.||++|||++++++.|+++.++.
T Consensus 332 --~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 332 --GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred --CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 112234457788999999999999999999999999999998753
No 28
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=5.3e-44 Score=356.00 Aligned_cols=282 Identities=29% Similarity=0.478 Sum_probs=228.8
Q ss_pred cCCccCHHHHHHHhcCCCcC------ceeccccCceEEEEEeCCCCEEEEEEEeccc----cchhhhHHHHHHHHhhcCC
Q 038098 278 NQRRFTYLEIFQATNGFSEN------NLIGRGGFGSVYKARIQDGMEVAVKVFDLQY----GRAFKSFDIECDMIKRIRH 347 (580)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h 347 (580)
....|++.++..+++.|... +.||+|+||.||+|.. +++.||||++.... ....+.+.+|++++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34678999999999999887 8999999999999987 48899999986432 2345678899999999999
Q ss_pred CCcceEEeeeecCCceeeEeeccCCCChHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEe
Q 038098 348 RNIIKIISSCSSDDFKALVLEYMPHGSLEKCLYSS--NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL 425 (580)
Q Consensus 348 ~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill 425 (580)
|||+++++++...+..++||||+++|+|.+++... ..++++..++.++.||+.||.||| +.+++||||||+||++
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili 166 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILL 166 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEE
Confidence 99999999999999999999999999999998743 346899999999999999999999 8999999999999999
Q ss_pred CCCCcEEEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHH
Q 038098 426 DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505 (580)
Q Consensus 426 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~ 505 (580)
+.++.+||+|||+++...............||+.|+|||.+.+ .++.++||||||+++|||++|+.||+...... ...
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~ 244 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLL 244 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS-BTT
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchH-HHH
Confidence 9999999999999986644333333345578999999998764 58999999999999999999999997643222 222
Q ss_pred HHHHhhc--ccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 038098 506 HWVNDLL--PISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRD 572 (580)
Q Consensus 506 ~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~ 572 (580)
.+..... ...+...++.... ..+..++..+.+++.+||+.||++||++++++++|+++.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 245 DIKEEIEDEEKTIEDYIDKKMN-------DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHHTTSCCHHHHSCSSCS-------CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHhhhhhhhhhhhcccccc-------ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 2222211 1112333332221 1234567889999999999999999999999999998864
No 29
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=5e-45 Score=363.20 Aligned_cols=260 Identities=28% Similarity=0.411 Sum_probs=205.5
Q ss_pred HhcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
..++|++.+.||+|+||.||+|+.. |+.||||++.... ......+.+|++++++++||||+++++++...+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 3467888999999999999999874 8899999986543 233467889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEEecCCCCCEEeCCCCcEEEccccCccccC
Q 038098 368 EYMPHGSLEKCLYSSN--YILDIFQRLNIMIDVASALEYLHFGYSVP--IIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 443 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~--i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 443 (580)
||+++|+|.+++.... ..+++..++.++.||+.||+||| +.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 9999999999998654 24899999999999999999999 888 9999999999999999999999999997543
Q ss_pred CCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchh
Q 038098 444 KEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDAN 523 (580)
Q Consensus 444 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 523 (580)
.. ........||+.|+|||.+.+..++.++|||||||++|||+||+.||...... .......
T Consensus 191 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~--~~~~~~~-------------- 252 (309)
T 3p86_A 191 ST--FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA--QVVAAVG-------------- 252 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH--HHHHHHH--------------
T ss_pred cc--ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHH--------------
Confidence 22 12234457999999999999999999999999999999999999998753111 0000000
Q ss_pred ccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 038098 524 LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574 (580)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~ 574 (580)
. .......+..++.++.+++.+||+.||++||+++|+++.|+.+.++.
T Consensus 253 -~--~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 253 -F--KCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp -H--SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred -h--cCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 0 00112233456778999999999999999999999999999887653
No 30
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.4e-45 Score=355.97 Aligned_cols=257 Identities=25% Similarity=0.401 Sum_probs=214.6
Q ss_pred cCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeeccC
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEYMP 371 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 371 (580)
++|+..+.||+|+||.||+|.+.+++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 5688889999999999999998888999999997543 234678999999999999999999999999999999999999
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCcccc
Q 038098 372 HGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ 451 (580)
Q Consensus 372 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 451 (580)
+|+|.+++......+++..++.++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 89 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~ 164 (269)
T 4hcu_A 89 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSS 164 (269)
T ss_dssp TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHST
T ss_pred CCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccc-cccc
Confidence 99999999887778999999999999999999999 9999999999999999999999999999998653321 1223
Q ss_pred cccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhccCCccc
Q 038098 452 TQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDE 530 (580)
Q Consensus 452 ~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 530 (580)
....+|..|+|||.+.+..++.++||||+|+++|||++ |+.||..... ..... .+... .
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~-----~~~~~--------~~~~~-------~ 224 (269)
T 4hcu_A 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVE--------DISTG-------F 224 (269)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHH--------HHHTT-------C
T ss_pred cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH-----HHHHH--------HHhcC-------c
Confidence 34456778999999998999999999999999999999 9999865211 11111 00000 0
Q ss_pred ccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 038098 531 HFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDS 573 (580)
Q Consensus 531 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~ 573 (580)
....+..++..+.+++.+||+.||++||+++|++++|+++.++
T Consensus 225 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 225 RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 1112234567799999999999999999999999999998753
No 31
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=5.8e-45 Score=365.51 Aligned_cols=260 Identities=26% Similarity=0.423 Sum_probs=212.2
Q ss_pred cCCCcCceeccccCceEEEEEeC----CCCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeE
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALV 366 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 366 (580)
++|.+.+.||+|+||.||+|.+. .+..||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 56788899999999999999874 34469999997542 23456788999999999999999999999999999999
Q ss_pred eeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCC
Q 038098 367 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED 446 (580)
Q Consensus 367 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 446 (580)
|||+++|+|.+++......+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 9999999999999877778999999999999999999999 8999999999999999999999999999998764432
Q ss_pred C-cccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhc
Q 038098 447 Q-SLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANL 524 (580)
Q Consensus 447 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 524 (580)
. ........+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .... .+...
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~~~---------~~~~~- 270 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR-----DVIS---------SVEEG- 270 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-----HHHH---------HHHTT-
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH-----HHHH---------HHHcC-
Confidence 2 122233446778999999998899999999999999999999 99998653111 1100 01100
Q ss_pred cCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 038098 525 LSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574 (580)
Q Consensus 525 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~ 574 (580)
.....+..++.++.+++.+||+.||++||+++|+++.|+++.+..
T Consensus 271 -----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 271 -----YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred -----CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 111233456788999999999999999999999999999987643
No 32
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.2e-45 Score=362.62 Aligned_cols=276 Identities=26% Similarity=0.418 Sum_probs=213.7
Q ss_pred hcCCCcCceeccccCceEEEEEe-----CCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeec--CCce
Q 038098 291 TNGFSENNLIGRGGFGSVYKARI-----QDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSS--DDFK 363 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~ 363 (580)
.++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. ....
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 35688899999999999999984 2688999999976655556788999999999999999999999854 3568
Q ss_pred eeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccC
Q 038098 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 443 (580)
Q Consensus 364 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 443 (580)
++||||+++|+|.+++...+..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 9999999999999999887777999999999999999999999 8999999999999999999999999999998664
Q ss_pred CCCCc-ccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccc--hhhhc
Q 038098 444 KEDQS-LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPIS--VMEIV 520 (580)
Q Consensus 444 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 520 (580)
..... .......++..|+|||.+.+..++.++||||||+++|||+||..|+..... ....+........ .....
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA---EFMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHH---HHHHHHCTTCCTHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChH---HHHhhhcCccccchhHHHHH
Confidence 33221 222334577789999999999999999999999999999999999865211 0111111000000 00111
Q ss_pred chhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038098 521 DANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575 (580)
Q Consensus 521 d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~ 575 (580)
+. .. ...+...+..++.++.+++.+||+.||++|||++|+++.|+++.+++.
T Consensus 243 ~~-~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l~ 294 (295)
T 3ugc_A 243 EL-LK--NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294 (295)
T ss_dssp HH-HH--TTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred HH-Hh--ccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhcc
Confidence 11 00 111223345678899999999999999999999999999999987653
No 33
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=9.5e-45 Score=363.65 Aligned_cols=248 Identities=24% Similarity=0.341 Sum_probs=207.4
Q ss_pred hcCCCcCceeccccCceEEEEEe-CCCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 291 TNGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
.++|.+.+.||+|+||.||+|.+ .+|+.||||++.... ......+.+|+++++.++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46799999999999999999986 579999999997543 234567889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 447 (580)
||+++|+|.+++...+ .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 94 e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 168 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG- 168 (328)
T ss_dssp CCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC-
T ss_pred ECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC-
Confidence 9999999999987654 5899999999999999999999 8999999999999999999999999999998653322
Q ss_pred cccccccccCCCcCCcccccCCCCC-CchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccC
Q 038098 448 SLTQTQTLATIGYMAPEYGREGQVS-TNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLS 526 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 526 (580)
......||+.|+|||.+.+..+. .++||||+||++|||+||+.||+... ....... +. ..
T Consensus 169 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~--------i~----~~ 229 (328)
T 3fe3_A 169 --KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN-----LKELRER--------VL----RG 229 (328)
T ss_dssp --GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHH--------HH----HC
T ss_pred --ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC-----HHHHHHH--------HH----hC
Confidence 23456799999999999887764 79999999999999999999997531 1111110 10 01
Q ss_pred CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 527 QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 527 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
....+..++.++.+|+.+||+.||++|||++|+++|
T Consensus 230 ----~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 230 ----KYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ----CCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ----CCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 111223456778999999999999999999999876
No 34
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4.5e-45 Score=356.29 Aligned_cols=258 Identities=25% Similarity=0.390 Sum_probs=214.4
Q ss_pred hcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeecc
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEYM 370 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 370 (580)
.++|+..+.||+|+||.||+|.++++..||+|++.... ...+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 36788899999999999999999888899999996543 23467889999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCccc
Q 038098 371 PHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLT 450 (580)
Q Consensus 371 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 450 (580)
++++|.+++...+..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....... ...
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~ 161 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ-YVS 161 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC-EEE
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhh-hhc
Confidence 999999999887777999999999999999999999 8999999999999999999999999999998664332 222
Q ss_pred ccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhccCCcc
Q 038098 451 QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKD 529 (580)
Q Consensus 451 ~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 529 (580)
.....+|..|+|||.+.+..++.++||||+|+++|||+| |+.||+..... .... .+...
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~--------~~~~~------- 221 (268)
T 3sxs_A 162 SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-----EVVL--------KVSQG------- 221 (268)
T ss_dssp CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHH--------HHHTT-------
T ss_pred ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH-----HHHH--------HHHcC-------
Confidence 334456778999999988889999999999999999999 99998653111 1000 00000
Q ss_pred cccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 038098 530 EHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDS 573 (580)
Q Consensus 530 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~ 573 (580)
.....+..++..+.+++.+||+.||++|||++|++++|+++.++
T Consensus 222 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 222 HRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp CCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred CCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 01112234567799999999999999999999999999988654
No 35
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-44 Score=362.11 Aligned_cols=253 Identities=20% Similarity=0.292 Sum_probs=210.1
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeec
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEY 369 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 369 (580)
.++|.+.+.||+|+||.||+|... +++.||+|++... ......+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 367889999999999999999865 6889999998644 23446688999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCC--CCcEEEccccCccccCCCCC
Q 038098 370 MPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD--NMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 370 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~--~~~~kl~Dfg~a~~~~~~~~ 447 (580)
+++|+|.+++......+++..++.++.||+.||.||| +.+|+||||||+||+++. ++.+||+|||+++.+....
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~- 158 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD- 158 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-
Confidence 9999999999877777999999999999999999999 899999999999999987 7899999999998764322
Q ss_pred cccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCC
Q 038098 448 SLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQ 527 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 527 (580)
......||+.|+|||.+.+..++.++||||+||++|||++|..||..... ..... .+.. ..
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~--------~i~~----~~ 219 (321)
T 1tki_A 159 --NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-----QQIIE--------NIMN----AE 219 (321)
T ss_dssp --EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHH--------HHHH----TC
T ss_pred --ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH-----HHHHH--------HHHc----CC
Confidence 23345689999999999888899999999999999999999999865211 11111 1111 11
Q ss_pred cccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 038098 528 KDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567 (580)
Q Consensus 528 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L 567 (580)
..........++.++.+++.+||..||++|||+.|+++|-
T Consensus 220 ~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 220 YTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp CCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred CCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence 1111122345677899999999999999999999999863
No 36
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.2e-45 Score=367.05 Aligned_cols=251 Identities=25% Similarity=0.362 Sum_probs=199.9
Q ss_pred HhcCCCcCceeccccCceEEEEEe-CCCCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
..++|++.+.||+|+||.||+|.. .+|+.||||++.... ......+.+|++++++++||||+++++++...+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 357799999999999999999986 479999999996543 234567889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 447 (580)
||+++|+|.+++...+ .+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 88 E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~- 162 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK- 162 (347)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC-
Confidence 9999999999987654 5999999999999999999999 8999999999999999999999999999997553222
Q ss_pred cccccccccCCCcCCcccccCCCC-CCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccC
Q 038098 448 SLTQTQTLATIGYMAPEYGREGQV-STNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLS 526 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 526 (580)
........||+.|+|||.+.+..+ +.++||||+||++|||++|+.||+... ...... .+...
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~-----~~~~~~--------~i~~~---- 225 (347)
T 3zgw_A 163 DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN-----VMALYK--------KIMRG---- 225 (347)
T ss_dssp ---------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHH--------HHHHT----
T ss_pred CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHH--------HHHcC----
Confidence 222345579999999999988775 899999999999999999999997521 111111 11110
Q ss_pred CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 527 QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 527 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
....+..++.++.+|+.+||+.||++|||++|+++|
T Consensus 226 ----~~~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 226 ----KYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp ----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred ----CCCCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 112233456778899999999999999999999986
No 37
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=6.8e-45 Score=370.78 Aligned_cols=270 Identities=22% Similarity=0.370 Sum_probs=217.8
Q ss_pred CHHHHHHHhcCCCcCceeccccCceEEEEEe------CCCCEEEEEEEecccc-chhhhHHHHHHHHhhc-CCCCcceEE
Q 038098 283 TYLEIFQATNGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVFDLQYG-RAFKSFDIECDMIKRI-RHRNIIKII 354 (580)
Q Consensus 283 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~ 354 (580)
...+.....++|.+.+.||+|+||.||+|++ .+++.||||++..... ...+.+.+|++++.++ +||||++++
T Consensus 13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 3444455668899999999999999999973 2467899999975432 3346789999999999 789999999
Q ss_pred eeeecCC-ceeeEeeccCCCChHHHhhcCCC-------------------------------------------------
Q 038098 355 SSCSSDD-FKALVLEYMPHGSLEKCLYSSNY------------------------------------------------- 384 (580)
Q Consensus 355 ~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------- 384 (580)
+++...+ ..++||||+++|+|.+++.....
T Consensus 93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (359)
T 3vhe_A 93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS 172 (359)
T ss_dssp EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence 9987755 48999999999999999976532
Q ss_pred ----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCc
Q 038098 385 ----------------ILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS 448 (580)
Q Consensus 385 ----------------~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 448 (580)
.+++..++.++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++........
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 249 (359)
T 3vhe_A 173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249 (359)
T ss_dssp -----------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC
T ss_pred cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccc
Confidence 2899999999999999999999 899999999999999999999999999999876544444
Q ss_pred ccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhccCC
Q 038098 449 LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQ 527 (580)
Q Consensus 449 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 527 (580)
.......||+.|+|||.+.+..++.++|||||||++|||+| |+.||....... .... .+....
T Consensus 250 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~------------~~~~~~--- 313 (359)
T 3vhe_A 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCR------------RLKEGT--- 313 (359)
T ss_dssp EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHH------------HHHHTC---
T ss_pred hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HHHH------------HHHcCC---
Confidence 44455678899999999999999999999999999999999 999987532211 1111 111100
Q ss_pred cccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 038098 528 KDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574 (580)
Q Consensus 528 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~ 574 (580)
....+..++.++.+++.+||+.||++||+++|++++|+++....
T Consensus 314 ---~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 314 ---RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ---CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 11122345678999999999999999999999999999998754
No 38
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=4.2e-44 Score=363.21 Aligned_cols=252 Identities=22% Similarity=0.299 Sum_probs=207.8
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccc------hhhhHHHHHHHHhhcCCCCcceEEeeeecCCce
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGR------AFKSFDIECDMIKRIRHRNIIKIISSCSSDDFK 363 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 363 (580)
.+.|.+.+.||+|+||.||+|... +|+.||+|++...... ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 467899999999999999999865 6899999999754321 346788999999999999999999999999999
Q ss_pred eeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCC----cEEEccccCc
Q 038098 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM----VAHLSDFGMA 439 (580)
Q Consensus 364 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~----~~kl~Dfg~a 439 (580)
++||||+++|+|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 9999999999999998754 46999999999999999999999 89999999999999998777 7999999999
Q ss_pred cccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhh
Q 038098 440 KPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEI 519 (580)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (580)
....... ......||+.|+|||.+.+..++.++||||+||++|||++|..||..... ...... +
T Consensus 167 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~-----~~~~~~--------i 230 (361)
T 2yab_A 167 HEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-----QETLAN--------I 230 (361)
T ss_dssp EECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-----HHHHHH--------H
T ss_pred eEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHH--------H
Confidence 8664322 23345699999999999988999999999999999999999999865211 111110 1
Q ss_pred cchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 520 VDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 520 ~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.. .........+...+.++.+|+.+||..||++|||++|+++|
T Consensus 231 ~~----~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 231 TA----VSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp HT----TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred Hh----cCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00 01111112234567789999999999999999999999875
No 39
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.6e-44 Score=361.86 Aligned_cols=253 Identities=24% Similarity=0.334 Sum_probs=207.7
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeec
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEY 369 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 369 (580)
++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 67899999999999999999866 78999999986443 23346788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCcc
Q 038098 370 MPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSL 449 (580)
Q Consensus 370 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 449 (580)
+++|+|.+++... ..+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.+.......
T Consensus 87 ~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 87 CSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp CTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred CCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 9999999988654 35999999999999999999999 9999999999999999999999999999998664333333
Q ss_pred cccccccCCCcCCcccccCCCC-CCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCCc
Q 038098 450 TQTQTLATIGYMAPEYGREGQV-STNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQK 528 (580)
Q Consensus 450 ~~~~~~~~~~y~aPE~~~~~~~-~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 528 (580)
......||+.|+|||.+.+..+ +.++||||+||++|||++|+.||............|....
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~----------------- 225 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK----------------- 225 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTC-----------------
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccc-----------------
Confidence 3445679999999999987765 7889999999999999999999976433222222222210
Q ss_pred ccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 529 DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 529 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
........++.++.+|+.+||+.||++|||++|++++
T Consensus 226 -~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 226 -TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp -TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -ccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0111224456778999999999999999999999875
No 40
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.2e-44 Score=369.79 Aligned_cols=260 Identities=25% Similarity=0.466 Sum_probs=203.5
Q ss_pred cCCCcCceeccccCceEEEEEeC----CCCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeE
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALV 366 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 366 (580)
++|.+.+.||+|+||.||+|+.. ++..||||++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 57899999999999999999864 57789999986543 23456789999999999999999999999999999999
Q ss_pred eeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCC
Q 038098 367 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED 446 (580)
Q Consensus 367 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 446 (580)
|||+++|+|.+++...+..+++..++.++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 9999999999999887778999999999999999999999 8999999999999999999999999999998664332
Q ss_pred Cc-ccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhc
Q 038098 447 QS-LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANL 524 (580)
Q Consensus 447 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 524 (580)
.. .......++..|+|||.+.+..++.++|||||||++|||++ |+.||..... .. ....+....
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~-----~~---------~~~~i~~~~ 267 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-----QD---------VIKAVDEGY 267 (373)
T ss_dssp ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH-----HH---------HHHHHHTTE
T ss_pred ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH-----HH---------HHHHHHcCC
Confidence 11 11222345778999999999999999999999999999998 9999865311 11 111111111
Q ss_pred cCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 038098 525 LSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574 (580)
Q Consensus 525 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~ 574 (580)
+...+..++.++.+++.+||+.||++||++.||++.|+++.+..
T Consensus 268 ------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 268 ------RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp ------ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred ------CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 11223456788999999999999999999999999999987653
No 41
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.7e-44 Score=355.26 Aligned_cols=258 Identities=22% Similarity=0.388 Sum_probs=212.1
Q ss_pred hcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeecc
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEYM 370 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 370 (580)
.++|+..+.||+|+||.||+|.+.++..||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 45788899999999999999999888899999997543 23467889999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCccc
Q 038098 371 PHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLT 450 (580)
Q Consensus 371 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 450 (580)
++|+|.+++......+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~ 177 (283)
T 3gen_A 102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTS 177 (283)
T ss_dssp TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH-HHS
T ss_pred CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccccccccccc-ccc
Confidence 999999999876677999999999999999999999 8999999999999999999999999999998653321 112
Q ss_pred ccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhccCCcc
Q 038098 451 QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKD 529 (580)
Q Consensus 451 ~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 529 (580)
.....+|+.|+|||.+.+..++.++||||+|+++|||+| |+.||...... ... +.+....
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-----~~~---------~~~~~~~----- 238 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-----ETA---------EHIAQGL----- 238 (283)
T ss_dssp TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHH---------HHHHTTC-----
T ss_pred ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-----HHH---------HHHhccc-----
Confidence 233456788999999998899999999999999999998 99998653111 100 0011000
Q ss_pred cccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 038098 530 EHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDS 573 (580)
Q Consensus 530 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~ 573 (580)
....+..++..+.+++.+||+.||++||+++|++++|+++.++
T Consensus 239 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 239 -RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp -CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 1112234567799999999999999999999999999999875
No 42
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.3e-44 Score=358.10 Aligned_cols=265 Identities=28% Similarity=0.429 Sum_probs=208.6
Q ss_pred hcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEee
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 368 (580)
.++|.+.+.||+|+||.||+|.+. ..+|+|+++... ....+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 367889999999999999999865 469999886432 234567889999999999999999999876 455789999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCc
Q 038098 369 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS 448 (580)
Q Consensus 369 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 448 (580)
|+++|+|.+++......+++.+++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++........
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred cCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 99999999999877788999999999999999999999 899999999999999999999999999999865433333
Q ss_pred ccccccccCCCcCCccccc---CCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhcc
Q 038098 449 LTQTQTLATIGYMAPEYGR---EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLL 525 (580)
Q Consensus 449 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 525 (580)
.......||+.|+|||.+. +..++.++|||||||++|||+||+.||......+ ....... ....
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~-~~~~~~~------------~~~~ 255 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVG------------RGYA 255 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHH------------HTCC
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH-HHHHHHh------------cCCC
Confidence 3344567999999999886 5678899999999999999999999997532111 1111111 0000
Q ss_pred CCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 038098 526 SQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLK 576 (580)
Q Consensus 526 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~~ 576 (580)
.. ........++.++.+++.+||+.||++||++.|++++|+.+...+.+
T Consensus 256 ~~--~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~pk 304 (307)
T 3lb7_A 256 SP--DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK 304 (307)
T ss_dssp CC--CSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred Cc--chhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhccc
Confidence 00 00112245678899999999999999999999999999998876544
No 43
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=4.1e-45 Score=378.88 Aligned_cols=260 Identities=20% Similarity=0.257 Sum_probs=210.5
Q ss_pred HHHHhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc---cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCc
Q 038098 287 IFQATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY---GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDF 362 (580)
Q Consensus 287 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 362 (580)
+....++|+..++||+|+||.||+|+.+ +++.||+|++.... ......+..|+.++..++||||+++++++.+.+.
T Consensus 69 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~ 148 (437)
T 4aw2_A 69 MRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNN 148 (437)
T ss_dssp HSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSE
T ss_pred ccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCE
Confidence 3345678999999999999999999976 57899999996531 2334558899999999999999999999999999
Q ss_pred eeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCcccc
Q 038098 363 KALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL 442 (580)
Q Consensus 363 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~ 442 (580)
.++||||+++|+|.+++......+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 149 ~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~ 225 (437)
T 4aw2_A 149 LYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKL 225 (437)
T ss_dssp EEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhhhhc
Confidence 99999999999999999876677999999999999999999999 999999999999999999999999999999866
Q ss_pred CCCCCcccccccccCCCcCCccccc-----CCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchh
Q 038098 443 LKEDQSLTQTQTLATIGYMAPEYGR-----EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVM 517 (580)
Q Consensus 443 ~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 517 (580)
.... ........||+.|+|||++. .+.++.++|||||||++|||++|+.||..... .+.. .
T Consensus 226 ~~~~-~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~-----~~~~--------~ 291 (437)
T 4aw2_A 226 MEDG-TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL-----VETY--------G 291 (437)
T ss_dssp CTTS-CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHH--------H
T ss_pred ccCC-CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh-----hHHH--------H
Confidence 4332 22334467999999999986 56789999999999999999999999975211 1111 1
Q ss_pred hhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 038098 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQ--RINAKEIVTR 566 (580)
Q Consensus 518 ~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rps~~ev~~~ 566 (580)
.++......... .....++.++.+|+.+|+..+|++ ||+++|+++|
T Consensus 292 ~i~~~~~~~~~p---~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 292 KIMNHKERFQFP---TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp HHHTHHHHCCCC---SSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred hhhhccccccCC---cccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 111111000000 111235678899999999999988 9999999876
No 44
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.2e-43 Score=353.85 Aligned_cols=269 Identities=24% Similarity=0.305 Sum_probs=208.0
Q ss_pred hcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEee
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 368 (580)
.++|++.+.||+|+||.||+|+..+|+.||+|++.... ......+.+|++++++++||||+++++++.+++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 46799999999999999999999889999999986442 2334678899999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCc
Q 038098 369 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS 448 (580)
Q Consensus 369 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 448 (580)
|+++ +|.+++......+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-- 173 (311)
T 3niz_A 100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV-- 173 (311)
T ss_dssp CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC--
T ss_pred CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCc--
Confidence 9975 898888877777999999999999999999999 8999999999999999999999999999998663222
Q ss_pred ccccccccCCCcCCcccccC-CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhc---ccchhhhcchh-
Q 038098 449 LTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLL---PISVMEIVDAN- 523 (580)
Q Consensus 449 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~- 523 (580)
.......+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||......+ .+........ +.......+..
T Consensus 174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~ 252 (311)
T 3niz_A 174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPNPREWPQVQELPL 252 (311)
T ss_dssp C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHHHCCCCTTTSGGGTTSHH
T ss_pred ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHCCCChHHhhhhhccch
Confidence 22344568999999998876 568999999999999999999999997643221 2222211110 00010000000
Q ss_pred ----ccC--CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 524 ----LLS--QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 524 ----~~~--~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
... ...........++.++.+|+.+||+.||++|||++|+++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000 0001111223456788999999999999999999999875
No 45
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=7.9e-44 Score=357.96 Aligned_cols=248 Identities=23% Similarity=0.306 Sum_probs=207.2
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecc---ccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQ---YGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
++|+..+.||+|+||.||+|+.+ +|+.||+|++... .......+..|+++++.++||||+++++++...+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57889999999999999999865 6999999999754 2334567888999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 447 (580)
||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 85 E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~- 159 (337)
T 1o6l_A 85 EYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG- 159 (337)
T ss_dssp ECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT-
T ss_pred eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC-
Confidence 9999999999887543 5899999999999999999999 8999999999999999999999999999998543222
Q ss_pred cccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCC
Q 038098 448 SLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQ 527 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 527 (580)
.......||+.|+|||.+.+..++.++||||+||++|||++|+.||.... ....... +...
T Consensus 160 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~~--------i~~~----- 220 (337)
T 1o6l_A 160 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HERLFEL--------ILME----- 220 (337)
T ss_dssp -CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHH--------HHHC-----
T ss_pred -CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC-----HHHHHHH--------HHcC-----
Confidence 22345679999999999999999999999999999999999999986521 1111111 1110
Q ss_pred cccccchhhhhHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 038098 528 KDEHFTTKGQCVSFIFNLAMKCTVESPEQRI-----NAKEIVTR 566 (580)
Q Consensus 528 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~ev~~~ 566 (580)
....+..++.++.+++.+||+.||++|| +++|+++|
T Consensus 221 ---~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 221 ---EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp ---CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ---CCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 0112234677899999999999999999 89999876
No 46
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=4e-44 Score=367.76 Aligned_cols=261 Identities=26% Similarity=0.420 Sum_probs=215.7
Q ss_pred hcCCCcCceeccccCceEEEEEeC--------CCCEEEEEEEecccc-chhhhHHHHHHHHhhc-CCCCcceEEeeeecC
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ--------DGMEVAVKVFDLQYG-RAFKSFDIECDMIKRI-RHRNIIKIISSCSSD 360 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 360 (580)
.++|.+.+.||+|+||.||+|... ++..||||++..... .....+.+|+++++++ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 357888999999999999999852 235799999965432 3456788999999999 999999999999999
Q ss_pred CceeeEeeccCCCChHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEe
Q 038098 361 DFKALVLEYMPHGSLEKCLYSSN---------------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL 425 (580)
Q Consensus 361 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill 425 (580)
+..++||||+++|+|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEE
Confidence 99999999999999999998654 35899999999999999999999 8999999999999999
Q ss_pred CCCCcEEEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchH
Q 038098 426 DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTL 504 (580)
Q Consensus 426 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~ 504 (580)
+.++.+||+|||+++...............+|+.|+|||.+.+..++.++|||||||++|||+| |+.||.....
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~----- 299 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV----- 299 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----
Confidence 9999999999999987654433334445567889999999999999999999999999999999 9999865311
Q ss_pred HHHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 038098 505 KHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574 (580)
Q Consensus 505 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~ 574 (580)
..... .+.... ....+..++.++.+++.+||+.||++||+++|++++|+++....
T Consensus 300 ~~~~~---------~~~~~~------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 300 EELFK---------LLKEGH------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp HHHHH---------HHHTTC------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred HHHHH---------HHHcCC------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 11111 111110 11223456788999999999999999999999999999998653
No 47
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=7.4e-44 Score=364.66 Aligned_cols=253 Identities=18% Similarity=0.279 Sum_probs=209.8
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeec
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEY 369 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 369 (580)
.++|.+.+.||+|+||.||+|... +|+.||+|++..........+.+|++++++++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 367999999999999999999865 6899999999765444556788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCC--CCcEEEccccCccccCCCCC
Q 038098 370 MPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD--NMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 370 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~--~~~~kl~Dfg~a~~~~~~~~ 447 (580)
+++|+|.+++......+++..++.++.||+.||+||| +.+|+||||||+||+++. ++.+||+|||+++......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~- 205 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE- 205 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCc-
Confidence 9999999999877777999999999999999999999 899999999999999974 5789999999998764322
Q ss_pred cccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCC
Q 038098 448 SLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQ 527 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 527 (580)
......||+.|+|||.+.+..++.++||||+||++|||+||+.||..... . ..... +.. ..
T Consensus 206 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~----~-~~~~~--------i~~----~~ 266 (387)
T 1kob_A 206 --IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD----L-ETLQN--------VKR----CD 266 (387)
T ss_dssp --CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH----H-HHHHH--------HHH----CC
T ss_pred --ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH----H-HHHHH--------HHh----CC
Confidence 22344699999999999998999999999999999999999999875211 1 11110 000 00
Q ss_pred cccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 528 KDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 528 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
..........++.++.+++.+||+.||++|||+.|+++|
T Consensus 267 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 267 WEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp CCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 000111223567789999999999999999999999986
No 48
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-43 Score=355.81 Aligned_cols=251 Identities=20% Similarity=0.298 Sum_probs=206.6
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc------chhhhHHHHHHHHhhcCCCCcceEEeeeecCCcee
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG------RAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKA 364 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 364 (580)
+.|...+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++...+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 56888999999999999999865 689999999965432 13567889999999999999999999999999999
Q ss_pred eEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCC----cEEEccccCcc
Q 038098 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM----VAHLSDFGMAK 440 (580)
Q Consensus 365 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~----~~kl~Dfg~a~ 440 (580)
+||||+++|+|.+++... ..+++..++.++.||+.||.||| +.+|+||||||+||+++.++ .+||+|||+++
T Consensus 91 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 999999999999998754 46999999999999999999999 89999999999999999887 89999999998
Q ss_pred ccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhc
Q 038098 441 PLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIV 520 (580)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (580)
...... ......||+.|+|||.+.+..++.++||||+||++|||++|+.||..... ...... +.
T Consensus 167 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~~--------~~ 230 (326)
T 2y0a_A 167 KIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-----QETLAN--------VS 230 (326)
T ss_dssp ECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-----HHHHHH--------HH
T ss_pred ECCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH-----HHHHHH--------HH
Confidence 663322 22345699999999999988999999999999999999999999865211 011000 00
Q ss_pred chhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 521 DANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 521 d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
. ............++..+.+++.+||+.||++|||++|+++|
T Consensus 231 ~----~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 231 A----VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp H----TCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred h----cCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 00001111224566788999999999999999999999985
No 49
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-44 Score=362.40 Aligned_cols=264 Identities=23% Similarity=0.360 Sum_probs=212.2
Q ss_pred hcCCCcCceeccccCceEEEEEe------CCCCEEEEEEEeccc-cchhhhHHHHHHHHhhc-CCCCcceEEeeeecCCc
Q 038098 291 TNGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVFDLQY-GRAFKSFDIECDMIKRI-RHRNIIKIISSCSSDDF 362 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 362 (580)
.++|...+.||+|+||.||+|.. .+++.||+|++.... ......+.+|+.+++++ +||||+++++++...+.
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 123 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 123 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence 46788899999999999999985 245679999996442 33457889999999999 89999999999999999
Q ss_pred eeeEeeccCCCChHHHhhcCCC----------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCC
Q 038098 363 KALVLEYMPHGSLEKCLYSSNY----------------------ILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKP 420 (580)
Q Consensus 363 ~~lv~e~~~~g~L~~~l~~~~~----------------------~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~ 420 (580)
.++||||+++|+|.+++..... .+++..++.++.||+.||+||| +.+|+||||||
T Consensus 124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp 200 (344)
T 1rjb_A 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAA 200 (344)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCSG
T ss_pred cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCh
Confidence 9999999999999999986543 3799999999999999999999 89999999999
Q ss_pred CCEEeCCCCcEEEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCcccc
Q 038098 421 SNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFF 499 (580)
Q Consensus 421 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~ 499 (580)
+||+++.++.+||+|||++................+|+.|+|||.+.++.++.++|||||||++|||+| |..||.....
T Consensus 201 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 280 (344)
T 1rjb_A 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 280 (344)
T ss_dssp GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred hhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc
Confidence 999999999999999999986654433333445567889999999988899999999999999999998 9999876321
Q ss_pred CCchHHHHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 038098 500 GDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLK 576 (580)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~~ 576 (580)
. ...... +.... ....+..++.++.+++.+||+.||++||++.|++++|+.+.++...
T Consensus 281 ~-~~~~~~------------~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 338 (344)
T 1rjb_A 281 D-ANFYKL------------IQNGF------KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEE 338 (344)
T ss_dssp S-HHHHHH------------HHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred H-HHHHHH------------HhcCC------CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHH
Confidence 1 111111 11110 1122334577899999999999999999999999999998776544
No 50
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=4.4e-44 Score=362.98 Aligned_cols=252 Identities=23% Similarity=0.325 Sum_probs=205.6
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc-----cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceee
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-----GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKAL 365 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 365 (580)
+.|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 56889999999999999999865 68999999996432 1235678999999999999999999999999999999
Q ss_pred EeeccCCCChHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCc---EEEccccCc
Q 038098 366 VLEYMPHGSLEKCLYSS---NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMV---AHLSDFGMA 439 (580)
Q Consensus 366 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~---~kl~Dfg~a 439 (580)
||||+++|+|.+++... +..+++..+..++.||+.||+||| +.+|+||||||+||+++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 99999999998877543 345899999999999999999999 899999999999999987655 999999999
Q ss_pred cccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhh
Q 038098 440 KPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEI 519 (580)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (580)
+...... .......||+.|+|||.+.+..++.++||||+||++|||++|+.||..... .... .+
T Consensus 181 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~--------~i 244 (351)
T 3c0i_A 181 IQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE------RLFE--------GI 244 (351)
T ss_dssp EECCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH------HHHH--------HH
T ss_pred eEecCCC--eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH------HHHH--------HH
Confidence 8764322 123345799999999999988999999999999999999999999865210 0000 01
Q ss_pred cchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 520 VDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 520 ~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.. ............++.++.+++.+||+.||++||++.|+++|
T Consensus 245 ~~----~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 245 IK----GKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp HH----TCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred Hc----CCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11 01111111224567789999999999999999999999875
No 51
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.3e-44 Score=361.69 Aligned_cols=258 Identities=23% Similarity=0.387 Sum_probs=205.9
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCE----EEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceee
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGME----VAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKAL 365 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 365 (580)
++|+..+.||+|+||.||+|.+. +++. ||+|.+.... ......+.+|+.++++++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 56888999999999999999854 4554 5777764332 344578899999999999999999999998754 789
Q ss_pred EeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCC
Q 038098 366 VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE 445 (580)
Q Consensus 366 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 445 (580)
|+||+.+|+|.+++......+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 99999999999999987788999999999999999999999 899999999999999999999999999999876544
Q ss_pred CCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhc
Q 038098 446 DQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANL 524 (580)
Q Consensus 446 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 524 (580)
..........+|..|+|||.+.+..++.++|||||||++|||+| |+.||+..... ... ..+....
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~------------~~~~~~~ 236 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EIS------------SILEKGE 236 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHH------------HHHHTTC
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHH------------HHHHcCC
Confidence 44334445567889999999999999999999999999999999 99998763211 111 1111111
Q ss_pred cCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 038098 525 LSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDS 573 (580)
Q Consensus 525 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~ 573 (580)
....+..++.++.+++.+||+.||++||+++|++++|+++.+.
T Consensus 237 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 237 ------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ------CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred ------CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 1122345677899999999999999999999999999988754
No 52
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=9.9e-45 Score=369.91 Aligned_cols=261 Identities=25% Similarity=0.386 Sum_probs=212.9
Q ss_pred cCCCcCceeccccCceEEEEEeC------CCCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCcee
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKA 364 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 364 (580)
++|.+.+.||+|+||.||+|.+. +++.||||++.... ......+.+|+.++++++||||+++++++...+..+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 56888999999999999999843 46789999986432 334457888999999999999999999999999999
Q ss_pred eEeeccCCCChHHHhhcCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCC---cEEEcc
Q 038098 365 LVLEYMPHGSLEKCLYSSN------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM---VAHLSD 435 (580)
Q Consensus 365 lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~---~~kl~D 435 (580)
+||||+++|+|.+++...+ ..+++..++.++.||++||+||| +.+|+||||||+|||++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEECC
Confidence 9999999999999987643 45899999999999999999999 99999999999999999555 599999
Q ss_pred ccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhccc
Q 038098 436 FGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPI 514 (580)
Q Consensus 436 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 514 (580)
||+++...............+|+.|+|||.+.+..++.++|||||||++|||+| |..||..... .....
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--~~~~~-------- 297 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLE-------- 297 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHH--------
T ss_pred CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHH--------
Confidence 999986543333333445568899999999999999999999999999999998 9999865311 11111
Q ss_pred chhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038098 515 SVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575 (580)
Q Consensus 515 ~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~ 575 (580)
.+... .....+..++..+.+|+.+||+.||++||+++||+++|+.+.+...
T Consensus 298 ----~i~~~------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 298 ----FVTSG------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp ----HHHTT------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred ----HHHcC------CCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 11110 0112234567789999999999999999999999999999876543
No 53
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=7e-44 Score=352.60 Aligned_cols=261 Identities=23% Similarity=0.375 Sum_probs=207.4
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc---cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeE
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY---GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALV 366 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 366 (580)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 357899999999999999999865 68999999985432 23346788999999999999999999999999999999
Q ss_pred eeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCC
Q 038098 367 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED 446 (580)
Q Consensus 367 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 446 (580)
|||+++|+|.+++...+ ++++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 99999999999987654 5899999999999999999999 8999999999999999999999999999998653322
Q ss_pred CcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccC
Q 038098 447 QSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLS 526 (580)
Q Consensus 447 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 526 (580)
........||+.|+|||.+.+..++.++||||+|+++|||+||+.||...... ..... .+.. .
T Consensus 166 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~----~~~~~---------~~~~---~ 228 (294)
T 4eqm_A 166 -LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV----SIAIK---------HIQD---S 228 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH----HHHHH---------HHSS---C
T ss_pred -ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH----HHHHH---------Hhhc---c
Confidence 12233456999999999999999999999999999999999999999753111 11000 0000 0
Q ss_pred CcccccchhhhhHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHHHH
Q 038098 527 QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRI-NAKEIVTRLLKIRD 572 (580)
Q Consensus 527 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-s~~ev~~~L~~~~~ 572 (580)
...........++..+.+++.+||+.||++|| +++++.+.|+++..
T Consensus 229 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 229 VPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp CCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred CCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 00001112244677899999999999999999 99999999887654
No 54
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-44 Score=365.35 Aligned_cols=264 Identities=26% Similarity=0.401 Sum_probs=214.5
Q ss_pred HhcCCCcCceeccccCceEEEEEeC------CCCEEEEEEEecccc-chhhhHHHHHHHHhhcCCCCcceEEeeeecCCc
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFDLQYG-RAFKSFDIECDMIKRIRHRNIIKIISSCSSDDF 362 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 362 (580)
..++|...+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++...+.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 4578999999999999999999864 347899999975432 345678899999999999999999999999999
Q ss_pred eeeEeeccCCCChHHHhhcCC-----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCC
Q 038098 363 KALVLEYMPHGSLEKCLYSSN-----------------------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLK 419 (580)
Q Consensus 363 ~~lv~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk 419 (580)
.++||||+++|+|.+++.... ..+++..++.++.||++||.||| +.+|+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCC
Confidence 999999999999999997642 56899999999999999999999 8999999999
Q ss_pred CCCEEeCCCCcEEEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccc
Q 038098 420 PSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIF 498 (580)
Q Consensus 420 ~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~ 498 (580)
|+||+++.++.+||+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||+| |..||....
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999986644333333345568899999999988899999999999999999999 999986521
Q ss_pred cCCchHHHHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 038098 499 FGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLK 576 (580)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~~ 576 (580)
. ..... .+.+.. ....+..++.++.+++.+||+.||++||++.|++++|+++.+++..
T Consensus 282 ~-----~~~~~--------~~~~~~-------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~~ 339 (343)
T 1luf_A 282 H-----EEVIY--------YVRDGN-------ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEG 339 (343)
T ss_dssp H-----HHHHH--------HHHTTC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC----
T ss_pred h-----HHHHH--------HHhCCC-------cCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhhh
Confidence 1 11111 011110 1122345677899999999999999999999999999998877654
No 55
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2e-43 Score=350.83 Aligned_cols=265 Identities=27% Similarity=0.363 Sum_probs=204.4
Q ss_pred hcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhh--cCCCCcceEEeeeec----CCcee
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKR--IRHRNIIKIISSCSS----DDFKA 364 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~----~~~~~ 364 (580)
.++|++.+.||+|+||.||+|++ +|+.||||++... ....+..|.+++.. ++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46799999999999999999988 5899999998643 33455667777666 799999999998644 34578
Q ss_pred eEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeEEecCCCCCEEeCCCCcEEEccccCc
Q 038098 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFG-----YSVPIIHCDLKPSNVLLDDNMVAHLSDFGMA 439 (580)
Q Consensus 365 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-----~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a 439 (580)
+||||+++|+|.+++.. ..+++..++.++.||+.||+|||.. .+.+|+||||||+||+++.++.+||+|||++
T Consensus 83 lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp EEECCCTTCBHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EehhhccCCCHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 99999999999999954 3589999999999999999999932 2678999999999999999999999999999
Q ss_pred cccCCCCCcc--cccccccCCCcCCcccccCC------CCCCchhhHhHHHHHHHHHhC----------CCCCCccccCC
Q 038098 440 KPLLKEDQSL--TQTQTLATIGYMAPEYGREG------QVSTNGDVYSFGIMLMETFTR----------KKPTDEIFFGD 501 (580)
Q Consensus 440 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Dvws~Gvil~elltg----------~~p~~~~~~~~ 501 (580)
+......... ......||+.|+|||.+.+. .++.++|||||||++|||+|| +.||.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 7654332211 12334799999999998776 455799999999999999999 77776543333
Q ss_pred chHHHHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 038098 502 MTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570 (580)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~ 570 (580)
............. ......+.......++.++.+++.+||+.||++|||++|+++.|+++
T Consensus 241 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 PSFEDMRKVVCVD---------QQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CCHHHHHHHHTTS---------CCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cchhhhhHHHhcc---------CCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 3332222211100 00001111112345678899999999999999999999999999986
No 56
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=6.9e-44 Score=356.18 Aligned_cols=263 Identities=23% Similarity=0.372 Sum_probs=216.8
Q ss_pred hcCCCcCceeccccCceEEEEEe------CCCCEEEEEEEecccc-chhhhHHHHHHHHhhc-CCCCcceEEeeeecCCc
Q 038098 291 TNGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVFDLQYG-RAFKSFDIECDMIKRI-RHRNIIKIISSCSSDDF 362 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 362 (580)
.++|...+.||+|+||.||+|.+ .+++.||+|++..... ...+.+.+|+++++++ +||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 36788899999999999999985 2467899999975432 3456788999999999 99999999999999999
Q ss_pred eeeEeeccCCCChHHHhhcCCC-----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEe
Q 038098 363 KALVLEYMPHGSLEKCLYSSNY-----------------ILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL 425 (580)
Q Consensus 363 ~~lv~e~~~~g~L~~~l~~~~~-----------------~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill 425 (580)
.++||||+++|+|.+++..... .+++..++.++.||++||+||| +.+++||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEE
Confidence 9999999999999999986543 4899999999999999999999 8999999999999999
Q ss_pred CCCCcEEEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchH
Q 038098 426 DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTL 504 (580)
Q Consensus 426 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~ 504 (580)
+.++.+||+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||+| |+.||....... ..
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~ 257 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-KF 257 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-HH
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-HH
Confidence 9999999999999987654443333344567889999999988999999999999999999999 999986532211 11
Q ss_pred HHHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038098 505 KHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575 (580)
Q Consensus 505 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~ 575 (580)
.. .+.... ....+..++.++.+++.+||+.||++||+++|++++|+++..+..
T Consensus 258 ~~------------~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 258 YK------------MIKEGF------RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp HH------------HHHHTC------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred HH------------HhccCC------CCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 11 111111 011123456789999999999999999999999999999887644
No 57
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.5e-44 Score=357.72 Aligned_cols=246 Identities=25% Similarity=0.366 Sum_probs=204.6
Q ss_pred cCCCcCceeccccCceEEEEEe-CCCCEEEEEEEeccc---cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 292 NGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFDLQY---GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
++|.+.+.||+|+||.||+|.. .+|+.||+|++.... ......+.+|+++++.++||||+++++++...+..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 6789999999999999999986 578999999996542 233467889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 447 (580)
||+ +|+|.+++...+ .+++..++.++.||+.||.||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 89 E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~- 162 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN- 162 (336)
T ss_dssp CCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB-
T ss_pred ECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc-
Confidence 999 679998886544 5999999999999999999999 8999999999999999999999999999998653322
Q ss_pred cccccccccCCCcCCcccccCCCC-CCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccC
Q 038098 448 SLTQTQTLATIGYMAPEYGREGQV-STNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLS 526 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 526 (580)
......||+.|+|||.+.+..+ +.++||||+||++|||++|+.||+...... ....
T Consensus 163 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~-----------------~~~~---- 219 (336)
T 3h4j_B 163 --FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN-----------------LFKK---- 219 (336)
T ss_dssp --TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT-----------------CBCC----
T ss_pred --ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH-----------------HHHH----
Confidence 2334569999999999987775 789999999999999999999996531110 0000
Q ss_pred CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 527 QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 527 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
........+...+.++.+|+.+||+.||++|||++|+++|
T Consensus 220 i~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 220 VNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CCSSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred HHcCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 0011122334567789999999999999999999999876
No 58
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.2e-43 Score=362.28 Aligned_cols=247 Identities=23% Similarity=0.325 Sum_probs=200.8
Q ss_pred CceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeeccCCCCh
Q 038098 297 NNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEYMPHGSL 375 (580)
Q Consensus 297 ~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 375 (580)
.+.||+|+||.||+|... +|+.||+|++........+.+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 568999999999999864 6899999999766545667889999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEe--CCCCcEEEccccCccccCCCCCcccccc
Q 038098 376 EKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL--DDNMVAHLSDFGMAKPLLKEDQSLTQTQ 453 (580)
Q Consensus 376 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill--~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 453 (580)
.+++......+++..++.++.||++||+||| +.+|+||||||+|||+ +.++.+||+|||+++.+.... ....
T Consensus 174 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~---~~~~ 247 (373)
T 2x4f_A 174 FDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---KLKV 247 (373)
T ss_dssp HHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC---BCCC
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc---cccc
Confidence 9999877777999999999999999999999 8999999999999999 677899999999998764322 2234
Q ss_pred cccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCCcccccc
Q 038098 454 TLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFT 533 (580)
Q Consensus 454 ~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 533 (580)
..||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ..+.. +.... ......
T Consensus 248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~~------------i~~~~----~~~~~~ 310 (373)
T 2x4f_A 248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-ETLNN------------ILACR----WDLEDE 310 (373)
T ss_dssp CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHH------------HHHTC----CCSCSG
T ss_pred ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHH------------HHhcc----CCCChh
Confidence 46999999999999889999999999999999999999998653110 01111 11110 001112
Q ss_pred hhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 534 TKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 534 ~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
....++.++.+|+.+||+.||++||+++|+++|
T Consensus 311 ~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 311 EFQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 224567789999999999999999999999985
No 59
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.5e-43 Score=368.49 Aligned_cols=254 Identities=20% Similarity=0.286 Sum_probs=206.4
Q ss_pred HhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeE
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALV 366 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 366 (580)
..++|++.+.||+|+||.||+|... +|+.||+|++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 3567999999999999999999864 78999999997543 23346788999999999999999999999999999999
Q ss_pred eeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeC---CCCcEEEccccCccccC
Q 038098 367 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD---DNMVAHLSDFGMAKPLL 443 (580)
Q Consensus 367 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~---~~~~~kl~Dfg~a~~~~ 443 (580)
|||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+|||++ .++.+||+|||+++...
T Consensus 89 ~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp ECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 99999999999887654 5999999999999999999999 89999999999999998 56789999999998664
Q ss_pred CCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchh
Q 038098 444 KEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDAN 523 (580)
Q Consensus 444 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 523 (580)
... .......||+.|+|||.+.+..++.++||||+||++|||++|++||..... ..... .+..
T Consensus 165 ~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~-----~~~~~---------~i~~- 227 (444)
T 3soa_A 165 GEQ--QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-----HRLYQ---------QIKA- 227 (444)
T ss_dssp TTC--CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHH---------HHHH-
T ss_pred CCC--ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH-----HHHHH---------HHHh-
Confidence 332 223446799999999999988999999999999999999999999865211 11111 0000
Q ss_pred ccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 524 LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
............+++++.+|+.+||+.||++|||++|+++|
T Consensus 228 --~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 228 --GAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp --TCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred --CCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 11111111223567889999999999999999999999985
No 60
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=6.5e-44 Score=356.51 Aligned_cols=260 Identities=25% Similarity=0.416 Sum_probs=214.9
Q ss_pred hcCCCcCceeccccCceEEEEEe------CCCCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCce
Q 038098 291 TNGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFK 363 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 363 (580)
.++|.+.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++...+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 46688899999999999999975 245789999986543 23456788999999999999999999999999999
Q ss_pred eeEeeccCCCChHHHhhcCC-----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCC
Q 038098 364 ALVLEYMPHGSLEKCLYSSN-----------------------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKP 420 (580)
Q Consensus 364 ~lv~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~ 420 (580)
++||||+++|+|.+++.... ..+++..++.++.||++||+||| +.+|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccch
Confidence 99999999999999997643 24899999999999999999999 89999999999
Q ss_pred CCEEeCCCCcEEEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCcccc
Q 038098 421 SNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFF 499 (580)
Q Consensus 421 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~ 499 (580)
+||+++.++.+||+|||+++...............+|+.|+|||.+.+..++.++||||+||++|||+| |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999987654443333444567888999999988889999999999999999999 9999865321
Q ss_pred CCchHHHHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 038098 500 GDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDS 573 (580)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~ 573 (580)
. .... .+.... ....+..++.++.+++.+||+.||++||+++|++++|+++..+
T Consensus 259 ~--~~~~------------~~~~~~------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 259 E--RLFN------------LLKTGH------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp G--GHHH------------HHHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred H--HHHH------------HhhcCC------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 1 1111 111100 1122345677899999999999999999999999999998764
No 61
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.4e-43 Score=347.71 Aligned_cols=252 Identities=27% Similarity=0.467 Sum_probs=205.9
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccc-------hhhhHHHHHHHHhhcCCCCcceEEeeeecCCce
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGR-------AFKSFDIECDMIKRIRHRNIIKIISSCSSDDFK 363 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 363 (580)
++|...+.||+|+||.||+|+.. +++.||+|++...... ..+.+.+|++++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 67888999999999999999864 7899999998543221 1267889999999999999999999997654
Q ss_pred eeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEEecCCCCCEEeCCCCc-----EEEccc
Q 038098 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP--IIHCDLKPSNVLLDDNMV-----AHLSDF 436 (580)
Q Consensus 364 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~--i~H~dlk~~Nill~~~~~-----~kl~Df 436 (580)
++||||+++|+|.+++......+++..++.++.|++.|++||| +.+ |+||||||+||+++.++. +||+||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 6999999999999999887778999999999999999999999 888 999999999999988776 999999
Q ss_pred cCccccCCCCCcccccccccCCCcCCcccc--cCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhccc
Q 038098 437 GMAKPLLKEDQSLTQTQTLATIGYMAPEYG--REGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPI 514 (580)
Q Consensus 437 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~--~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 514 (580)
|+++.... ......||+.|+|||.+ ....++.++||||+||++|||++|+.||................
T Consensus 174 g~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~---- 244 (287)
T 4f0f_A 174 GLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE---- 244 (287)
T ss_dssp TTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHH----
T ss_pred Cccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhc----
Confidence 99974322 23345689999999998 34567899999999999999999999997643222111111110
Q ss_pred chhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 038098 515 SVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570 (580)
Q Consensus 515 ~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~ 570 (580)
. ......+..++.++.+++.+||+.||++||+++|+++.|+++
T Consensus 245 -------~------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 245 -------E------GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp -------S------CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred -------c------CCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 0 001122345678899999999999999999999999999864
No 62
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=8.6e-44 Score=363.04 Aligned_cols=271 Identities=17% Similarity=0.200 Sum_probs=212.2
Q ss_pred hcCCCcCceeccccCceEEEEEeCC------CCEEEEEEEeccccch-----------hhhHHHHHHHHhhcCCCCcceE
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQD------GMEVAVKVFDLQYGRA-----------FKSFDIECDMIKRIRHRNIIKI 353 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~~ 353 (580)
.++|.+.+.||+|+||.||+|.+.+ ++.||||++....... ...+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4579999999999999999998754 4789999986543211 1123345566777889999999
Q ss_pred EeeeecC----CceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeC--C
Q 038098 354 ISSCSSD----DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD--D 427 (580)
Q Consensus 354 ~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~--~ 427 (580)
++++... ...++||||+ +++|.+++......+++..++.++.||+.||+||| +.+|+||||||+|||++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecCC
Confidence 9998764 4579999999 99999999887778999999999999999999999 89999999999999999 8
Q ss_pred CCcEEEccccCccccCCCCCcc-----cccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCc
Q 038098 428 NMVAHLSDFGMAKPLLKEDQSL-----TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDM 502 (580)
Q Consensus 428 ~~~~kl~Dfg~a~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~ 502 (580)
++.+||+|||+++.+....... ......||+.|+|||.+.+..++.++|||||||++|||+||+.||..... ..
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~-~~ 268 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK-DP 268 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT-CH
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc-CH
Confidence 9999999999998764332211 12334599999999999999999999999999999999999999975322 22
Q ss_pred hHHHHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038098 503 TLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575 (580)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~ 575 (580)
....+........+.+.++..+. ...++.++.+++.+||+.||++||+++++++.|+++..+..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~ 332 (364)
T 3op5_A 269 KYVRDSKIRYRENIASLMDKCFP---------AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG 332 (364)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHSC---------TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhhhHHHHHHHhcc---------cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 22222222222233333333221 13456789999999999999999999999999999987653
No 63
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.5e-43 Score=349.51 Aligned_cols=267 Identities=15% Similarity=0.129 Sum_probs=216.9
Q ss_pred hcCCCcCceeccccCceEEEEEe-CCCCEEEEEEEeccccchhhhHHHHHHHHhhc-CCCCcceEEeeeecCCceeeEee
Q 038098 291 TNGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFDLQYGRAFKSFDIECDMIKRI-RHRNIIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 368 (580)
.++|.+.+.||+|+||.||+|.. .+|+.||||++... .....+.+|+++++++ +|+|++++++++......++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC--CccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 35789999999999999999985 57899999998644 3346788899999999 79999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCc-----EEEccccCccccC
Q 038098 369 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMV-----AHLSDFGMAKPLL 443 (580)
Q Consensus 369 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~-----~kl~Dfg~a~~~~ 443 (580)
|+ +++|.+++...+..+++..++.++.||+.||+||| +.+|+||||||+||+++.++. +||+|||+++...
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99 99999999887777999999999999999999999 999999999999999987776 9999999998764
Q ss_pred CCCCc-----ccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhh
Q 038098 444 KEDQS-----LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVME 518 (580)
Q Consensus 444 ~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (580)
..... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ ..... .
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~~~--------~ 232 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN--KQKYE--------R 232 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH--HHHHH--------H
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc--HHHHH--------H
Confidence 43221 123455699999999999999999999999999999999999999976422111 11000 0
Q ss_pred hcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 038098 519 IVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLK 576 (580)
Q Consensus 519 ~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~~ 576 (580)
+....... ........++.++.+++.+||+.||++||++++|++.|+++.++...
T Consensus 233 ~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~ 287 (298)
T 1csn_A 233 IGEKKQST---PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT 287 (298)
T ss_dssp HHHHHHHS---CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHhhccCc---cHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCC
Confidence 00000000 00111234677899999999999999999999999999999887543
No 64
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.7e-43 Score=359.82 Aligned_cols=252 Identities=21% Similarity=0.351 Sum_probs=206.7
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
.++|.+.+.||+|+||.||+|... +|+.||+|++.... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 467999999999999999999865 68999999997543 234467889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCC---cEEEccccCccccCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM---VAHLSDFGMAKPLLK 444 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~---~~kl~Dfg~a~~~~~ 444 (580)
||+++|+|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+||+++.++ .+||+|||++.....
T Consensus 108 e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 108 DLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp CCCCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 999999999988754 45899999999999999999999 89999999999999998654 599999999986643
Q ss_pred CCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhc
Q 038098 445 EDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANL 524 (580)
Q Consensus 445 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 524 (580)
.. ......||+.|+|||.+.+..++.++||||+||++|||++|+.||..... ...... +. .
T Consensus 184 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~-----~~~~~~--------i~-~-- 244 (362)
T 2bdw_A 184 SE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-----HRLYAQ--------IK-A-- 244 (362)
T ss_dssp CC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH--------HH-H--
T ss_pred Cc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHH--------HH-h--
Confidence 22 22345799999999999988999999999999999999999999865211 111110 00 0
Q ss_pred cCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 525 LSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 525 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
............++.++.+++.+||+.||++||++.|+++|
T Consensus 245 -~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 245 -GAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -TCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -CCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000112234567789999999999999999999999886
No 65
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.6e-43 Score=356.16 Aligned_cols=265 Identities=20% Similarity=0.207 Sum_probs=214.2
Q ss_pred hcCCCcCceeccccCceEEEEEe-CCCCEEEEEEEeccccchhhhHHHHHHHHhhc-CCCCcceEEeeeecCCceeeEee
Q 038098 291 TNGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFDLQYGRAFKSFDIECDMIKRI-RHRNIIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 368 (580)
.++|.+.+.||+|+||.||+|.. .+|+.||||++.... ....+..|+++++++ +||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 36788999999999999999985 578999999986542 335788999999999 99999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCc-----EEEccccCccccC
Q 038098 369 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMV-----AHLSDFGMAKPLL 443 (580)
Q Consensus 369 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~-----~kl~Dfg~a~~~~ 443 (580)
|+ +++|.+++...+..+++..++.++.||+.||+||| +.+|+||||||+||+++.++. +||+|||+++.+.
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99 89999999877678999999999999999999999 899999999999999999887 9999999998764
Q ss_pred CCCCcc-----cccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhh
Q 038098 444 KEDQSL-----TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVME 518 (580)
Q Consensus 444 ~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (580)
...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ........
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~--~~~~~~~~-------- 231 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD--TLKERYQK-------- 231 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS--SHHHHHHH--------
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc--cHHHHHHH--------
Confidence 332211 124567999999999999999999999999999999999999999764221 11111111
Q ss_pred hcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038098 519 IVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575 (580)
Q Consensus 519 ~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~ 575 (580)
+.+...... .......++ ++.+++.+||+.||.+||++++|.+.|+++.++..
T Consensus 232 i~~~~~~~~---~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~ 284 (330)
T 2izr_A 232 IGDTKRATP---IEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKG 284 (330)
T ss_dssp HHHHHHHSC---HHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHhhhccCC---HHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 000000000 000112244 89999999999999999999999999998887653
No 66
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=8.3e-44 Score=357.42 Aligned_cols=258 Identities=23% Similarity=0.380 Sum_probs=208.0
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCE----EEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceee
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGME----VAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKAL 365 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 365 (580)
++|+..+.||+|+||.||+|.+. +++. ||+|++.... ......+..|+.++++++||||+++++++. .+..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 56888999999999999999864 4554 7777774332 334467788999999999999999999986 456889
Q ss_pred EeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCC
Q 038098 366 VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE 445 (580)
Q Consensus 366 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 445 (580)
||||+.+|+|.+++...+..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999999999877678999999999999999999999 899999999999999999999999999999977554
Q ss_pred CCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhc
Q 038098 446 DQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANL 524 (580)
Q Consensus 446 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 524 (580)
..........+|..|+|||.+.++.++.++|||||||++|||+| |+.||...... ....... ...
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~------------~~~ 234 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLLE------------KGE 234 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHHHH------------TTC
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHHHH------------cCC
Confidence 44444455668889999999998999999999999999999999 99998763211 1111111 100
Q ss_pred cCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 038098 525 LSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDS 573 (580)
Q Consensus 525 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~ 573 (580)
....+..++.++.+++.+||+.||++||+++|++++|+++...
T Consensus 235 ------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 235 ------RLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp ------BCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred ------CCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 1112233455678999999999999999999999999987543
No 67
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=3.5e-43 Score=347.41 Aligned_cols=269 Identities=24% Similarity=0.266 Sum_probs=206.2
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc--chhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEee
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG--RAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 368 (580)
++|+..+.||+|+||+||+|... +|+.||+|++..... .....+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46888999999999999999875 689999999975432 334678899999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCc
Q 038098 369 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS 448 (580)
Q Consensus 369 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 448 (580)
|+++ ++.+++......+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-- 155 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC--
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc--
Confidence 9976 777777666677999999999999999999999 8999999999999999999999999999998663322
Q ss_pred ccccccccCCCcCCcccccCCC-CCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccc---hhhhc---c
Q 038098 449 LTQTQTLATIGYMAPEYGREGQ-VSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPIS---VMEIV---D 521 (580)
Q Consensus 449 ~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~---d 521 (580)
.......||+.|+|||.+.+.. ++.++||||+||++|||++|+.||.........+........... ..... +
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence 2234457899999999987765 799999999999999999988886432111111222211111000 00000 0
Q ss_pred hh---ccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 522 AN---LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 522 ~~---~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.. ...............+.++.+|+.+||+.||++|||++|+++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00 0000001111223567789999999999999999999999875
No 68
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.2e-43 Score=353.05 Aligned_cols=270 Identities=27% Similarity=0.393 Sum_probs=207.0
Q ss_pred HHHHhcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhc--CCCCcceEEeeeecC----
Q 038098 287 IFQATNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRI--RHRNIIKIISSCSSD---- 360 (580)
Q Consensus 287 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~~~~---- 360 (580)
-....++|++.+.||+|+||.||+|+.. |+.||||++... ....+..|.+++... +||||+++++++...
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 3345578999999999999999999986 899999998643 224445566666555 899999999998876
Q ss_pred CceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC--------CeEEecCCCCCEEeCCCCcEE
Q 038098 361 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV--------PIIHCDLKPSNVLLDDNMVAH 432 (580)
Q Consensus 361 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~--------~i~H~dlk~~Nill~~~~~~k 432 (580)
...++||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||+||+++.++.+|
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 182 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCC 182 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred CceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence 6789999999999999999764 4899999999999999999999 77 999999999999999999999
Q ss_pred EccccCccccCCCCCcc--cccccccCCCcCCcccccCCCCCCc------hhhHhHHHHHHHHHhC----------CCCC
Q 038098 433 LSDFGMAKPLLKEDQSL--TQTQTLATIGYMAPEYGREGQVSTN------GDVYSFGIMLMETFTR----------KKPT 494 (580)
Q Consensus 433 l~Dfg~a~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~------~Dvws~Gvil~elltg----------~~p~ 494 (580)
|+|||+++.+....... ......||+.|+|||.+.+...+.+ +|||||||++|||+|| +.||
T Consensus 183 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~ 262 (337)
T 3mdy_A 183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262 (337)
T ss_dssp ECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccH
Confidence 99999997664332211 1234579999999999987766665 9999999999999999 4555
Q ss_pred CccccCCchHHHHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 038098 495 DEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574 (580)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~ 574 (580)
............+.. .+.................++.++.+++.+||+.||++||+++|++++|+++.++.
T Consensus 263 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 263 HDLVPSDPSYEDMRE---------IVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp TTTSCSSCCHHHHHH---------HHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred hhhcCCCCchhhhHH---------HHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 443222222222211 11111111111111223467889999999999999999999999999999988753
No 69
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=4.6e-44 Score=368.15 Aligned_cols=256 Identities=23% Similarity=0.273 Sum_probs=208.3
Q ss_pred HHHhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecc---ccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCce
Q 038098 288 FQATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQ---YGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFK 363 (580)
Q Consensus 288 ~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 363 (580)
....++|...+.||+|+||.||+|+.+ +++.||+|++... .......+..|+.+++.++||||+++++++.+.+..
T Consensus 65 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 144 (410)
T 3v8s_A 65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 144 (410)
T ss_dssp SCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEE
Confidence 335678999999999999999999876 6899999999653 123345688999999999999999999999999999
Q ss_pred eeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccC
Q 038098 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 443 (580)
Q Consensus 364 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 443 (580)
++||||+++|+|.+++... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+...
T Consensus 145 ~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~ 219 (410)
T 3v8s_A 145 YMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 219 (410)
T ss_dssp EEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeEeec
Confidence 9999999999999998764 4899999999999999999999 8999999999999999999999999999998664
Q ss_pred CCCCcccccccccCCCcCCcccccCCC----CCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhh
Q 038098 444 KEDQSLTQTQTLATIGYMAPEYGREGQ----VSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEI 519 (580)
Q Consensus 444 ~~~~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (580)
... ........||+.|+|||++.+.. ++.++|||||||++|||++|+.||..... .... ..+
T Consensus 220 ~~~-~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----~~~~--------~~i 285 (410)
T 3v8s_A 220 KEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----VGTY--------SKI 285 (410)
T ss_dssp TTS-EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHH--------HHH
T ss_pred cCC-cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh-----hhHH--------HHH
Confidence 332 22234567999999999987654 78999999999999999999999965211 1111 111
Q ss_pred cchhccCCcccccchhhhhHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 038098 520 VDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQ--RINAKEIVTR 566 (580)
Q Consensus 520 ~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rps~~ev~~~ 566 (580)
...... ..++....++.++.+|+.+||..+|.+ ||+++||++|
T Consensus 286 ~~~~~~----~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 286 MNHKNS----LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp HTHHHH----CCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred Hhcccc----ccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 111100 011222346678999999999999998 9999999986
No 70
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.6e-43 Score=349.15 Aligned_cols=268 Identities=23% Similarity=0.278 Sum_probs=204.5
Q ss_pred cCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeec
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEY 369 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 369 (580)
++|...+.||+|+||.||+|+..+|+.||+|++.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 4688899999999999999998889999999986442 22346788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCcc
Q 038098 370 MPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSL 449 (580)
Q Consensus 370 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 449 (580)
+++ +|.+++......+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++...... .
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV--R 155 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc--c
Confidence 976 999998877777999999999999999999999 8999999999999999999999999999998653221 1
Q ss_pred cccccccCCCcCCcccccC-CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhccc---chhhh-----c
Q 038098 450 TQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPI---SVMEI-----V 520 (580)
Q Consensus 450 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~ 520 (580)
......+|+.|+|||.+.+ ..++.++||||+||++|||+||+.||......+ .+.......... ..... .
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCCCChhhchhhhccccc
Confidence 2234568999999999876 458999999999999999999999997632111 111111110000 00000 0
Q ss_pred chhccC-CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 521 DANLLS-QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 521 d~~~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
++.... ...........++.++.+++.+||+.||++|||++|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000 0000111123467788999999999999999999999875
No 71
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.2e-43 Score=369.71 Aligned_cols=252 Identities=29% Similarity=0.435 Sum_probs=209.8
Q ss_pred hcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCC-ceeeEeec
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDD-FKALVLEY 369 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~ 369 (580)
.++|...+.||+|+||.||+|.+. |+.||||+++... ..+.+.+|++++++++||||+++++++...+ ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 356888899999999999999986 7899999997543 4578999999999999999999999987655 78999999
Q ss_pred cCCCChHHHhhcCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCc
Q 038098 370 MPHGSLEKCLYSSNY-ILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS 448 (580)
Q Consensus 370 ~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 448 (580)
+++|+|.+++...+. .+++..++.++.||++||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 342 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc---
Confidence 999999999987653 4799999999999999999999 899999999999999999999999999999854221
Q ss_pred ccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhccCC
Q 038098 449 LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQ 527 (580)
Q Consensus 449 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 527 (580)
.....++..|+|||.+.+..++.++|||||||++|||+| |+.||......+ ... .+...
T Consensus 343 --~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~------------~i~~~---- 402 (450)
T 1k9a_A 343 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVP------------RVEKG---- 402 (450)
T ss_dssp ------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHH------------HHHTT----
T ss_pred --ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHH------------HHHcC----
Confidence 122357889999999999999999999999999999999 999987532211 111 11110
Q ss_pred cccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 038098 528 KDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDS 573 (580)
Q Consensus 528 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~ 573 (580)
.+...+..++.++.+++.+||+.||++|||+.++++.|+++...
T Consensus 403 --~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 403 --YKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred --CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 12233456788999999999999999999999999999998754
No 72
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=8.9e-44 Score=349.66 Aligned_cols=260 Identities=23% Similarity=0.358 Sum_probs=202.3
Q ss_pred hcCCCcCceeccccCceEEEEEeCC----CCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceee
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQD----GMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKAL 365 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 365 (580)
.++|++.+.||+|+||.||+|.... +..||+|++.... ....+.+.+|+.++++++||||+++++++. .+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 4678889999999999999998642 4569999986432 234567889999999999999999999985 466899
Q ss_pred EeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCC
Q 038098 366 VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE 445 (580)
Q Consensus 366 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 445 (580)
||||+++|+|.+++...+..+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 99999999999999887778999999999999999999999 899999999999999999999999999999866432
Q ss_pred CCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhc
Q 038098 446 DQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANL 524 (580)
Q Consensus 446 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 524 (580)
.. .......+|+.|+|||.+....++.++||||||+++|||++ |..||...... ..... +...
T Consensus 170 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--~~~~~-----------i~~~-- 233 (281)
T 1mp8_A 170 TY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGR-----------IENG-- 233 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHH-----------HHTT--
T ss_pred cc-cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--HHHHH-----------HHcC--
Confidence 21 12233456788999999988899999999999999999997 99998753211 11111 1000
Q ss_pred cCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038098 525 LSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575 (580)
Q Consensus 525 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~ 575 (580)
.....+..++.++.+++.+||+.||++||++.|++++|+++..+..
T Consensus 234 -----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 279 (281)
T 1mp8_A 234 -----ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 279 (281)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -----CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhc
Confidence 0112234567889999999999999999999999999999987653
No 73
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.6e-43 Score=350.51 Aligned_cols=273 Identities=19% Similarity=0.276 Sum_probs=211.7
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCC--ceeeEe
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDD--FKALVL 367 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv~ 367 (580)
++|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 56888999999999999999876 58999999996543 344567789999999999999999999987655 679999
Q ss_pred eccCCCChHHHhhcCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEe----CCCCcEEEccccCccc
Q 038098 368 EYMPHGSLEKCLYSSNY--ILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL----DDNMVAHLSDFGMAKP 441 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill----~~~~~~kl~Dfg~a~~ 441 (580)
||+++|+|.+++..... .+++..++.++.||+.||+||| +.+|+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 99999999999986543 3899999999999999999999 8999999999999999 8888999999999986
Q ss_pred cCCCCCcccccccccCCCcCCccccc--------CCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCch---HHHHHHh
Q 038098 442 LLKEDQSLTQTQTLATIGYMAPEYGR--------EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMT---LKHWVND 510 (580)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~y~aPE~~~--------~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~---~~~~~~~ 510 (580)
..... ......||..|+|||.+. +..++.++|||||||++|||+||+.||......... .......
T Consensus 166 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (319)
T 4euu_A 166 LEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (319)
T ss_dssp CCTTC---CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred cCCCC---ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence 64332 223456999999999876 578899999999999999999999999653222211 1111221
Q ss_pred hcccchhhhcch---h--ccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 038098 511 LLPISVMEIVDA---N--LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570 (580)
Q Consensus 511 ~~~~~~~~~~d~---~--~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~ 570 (580)
..+..+...... . ...............+..+.+++.+||+.||++|||++|+++|..+.
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 111111100000 0 00011111223456788899999999999999999999999998753
No 74
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=8.6e-44 Score=346.99 Aligned_cols=257 Identities=25% Similarity=0.405 Sum_probs=213.9
Q ss_pred cCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeeccC
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEYMP 371 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 371 (580)
++|...+.||+|+||.||+|.+.+++.||+|++..... ..+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 56888899999999999999988889999999975432 34678899999999999999999999999999999999999
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCcccc
Q 038098 372 HGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ 451 (580)
Q Consensus 372 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 451 (580)
+++|.+++......+++..++.++.|++.||.||| +.+++||||||+||+++.++.+||+|||++....... ....
T Consensus 87 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~ 162 (267)
T 3t9t_A 87 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSS 162 (267)
T ss_dssp TCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHST
T ss_pred CCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccc-cccc
Confidence 99999999887777999999999999999999999 8999999999999999999999999999998653221 1122
Q ss_pred cccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhccCCccc
Q 038098 452 TQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDE 530 (580)
Q Consensus 452 ~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 530 (580)
....++..|+|||.+.+..++.++||||+|+++|||++ |+.||..... ...... +.. ..
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~--------i~~-~~------ 222 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVED--------IST-GF------ 222 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHH--------HHT-TC------
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH-----HHHHHH--------Hhc-CC------
Confidence 33457788999999988899999999999999999999 8999865211 111110 000 00
Q ss_pred ccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 038098 531 HFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDS 573 (580)
Q Consensus 531 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~ 573 (580)
....+..++..+.+++.+||+.||++||+++|++++|+++.++
T Consensus 223 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 223 RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 1112234567789999999999999999999999999998763
No 75
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=8e-44 Score=357.39 Aligned_cols=262 Identities=24% Similarity=0.442 Sum_probs=197.5
Q ss_pred HhcCCCcCceeccccCceEEEEEeCC-CC---EEEEEEEecc--ccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCce
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQD-GM---EVAVKVFDLQ--YGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFK 363 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~~-~~---~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 363 (580)
..++|.+.+.||+|+||.||+|.... ++ .||||++... .....+.+.+|++++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 34679999999999999999998653 32 7999998654 334567889999999999999999999999876655
Q ss_pred ------eeEeeccCCCChHHHhhcCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEE
Q 038098 364 ------ALVLEYMPHGSLEKCLYSSN-----YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAH 432 (580)
Q Consensus 364 ------~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~k 432 (580)
++||||+++|+|.+++.... ..+++..++.++.||++||+||| +.+|+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEE
Confidence 89999999999999986432 25899999999999999999999 89999999999999999999999
Q ss_pred EccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhh
Q 038098 433 LSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDL 511 (580)
Q Consensus 433 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~ 511 (580)
|+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |+.||...... ....
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~----- 250 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA--EIYN----- 250 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHH-----
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH--HHHH-----
Confidence 999999987644443333445567889999999999999999999999999999999 99998753211 1111
Q ss_pred cccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 038098 512 LPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574 (580)
Q Consensus 512 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~ 574 (580)
.+... .....+..++.++.+++.+||+.||++||++.++++.|+++....
T Consensus 251 ------~~~~~-------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 251 ------YLIGG-------NRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp ------HHHTT-------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred ------HHhcC-------CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 01100 011223456778999999999999999999999999999987654
No 76
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=8.3e-44 Score=360.15 Aligned_cols=249 Identities=24% Similarity=0.304 Sum_probs=202.0
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecc---ccchhhhHHHHHHHHhhc-CCCCcceEEeeeecCCceee
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQ---YGRAFKSFDIECDMIKRI-RHRNIIKIISSCSSDDFKAL 365 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 365 (580)
.++|+..+.||+|+||.||+|+.+ +|+.||||++... .......+..|.++++.+ +||||+++++++.+.+..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 478999999999999999999865 6899999999754 223456678899999988 69999999999999999999
Q ss_pred EeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCC
Q 038098 366 VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE 445 (580)
Q Consensus 366 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 445 (580)
||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.....
T Consensus 102 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~ 177 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177 (353)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence 999999999999987654 5999999999999999999999 899999999999999999999999999999854222
Q ss_pred CCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhcc
Q 038098 446 DQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLL 525 (580)
Q Consensus 446 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 525 (580)
........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..... .+...
T Consensus 178 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~~~~--------~i~~~--- 239 (353)
T 3txo_A 178 --GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE-----DDLFE--------AILND--- 239 (353)
T ss_dssp ----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH--------HHHHC---
T ss_pred --CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH-----HHHHH--------HHHcC---
Confidence 2233456799999999999988899999999999999999999999975311 11111 11111
Q ss_pred CCcccccchhhhhHHHHHHHHhhccCCCCCCCCCH------HHHHHH
Q 038098 526 SQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINA------KEIVTR 566 (580)
Q Consensus 526 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~------~ev~~~ 566 (580)
....+...+.++.+++.+||+.||++||++ +|+++|
T Consensus 240 -----~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 240 -----EVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp -----CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred -----CCCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 111223456778999999999999999998 777765
No 77
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=358.34 Aligned_cols=281 Identities=26% Similarity=0.331 Sum_probs=203.8
Q ss_pred hcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHH--HhhcCCCCcceEEeeee-----cCCce
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDM--IKRIRHRNIIKIISSCS-----SDDFK 363 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~~~~~~~-----~~~~~ 363 (580)
.++|.+.+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++. .....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 36788999999999999999987 48999999996442 2334444444 44589999999998543 23356
Q ss_pred eeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC---------CeEEecCCCCCEEeCCCCcEEEc
Q 038098 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV---------PIIHCDLKPSNVLLDDNMVAHLS 434 (580)
Q Consensus 364 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~---------~i~H~dlk~~Nill~~~~~~kl~ 434 (580)
++||||+++|+|.+++.... .++..++.++.||++||+||| +. +|+||||||+|||++.++.+||+
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 89999999999999997654 589999999999999999999 77 99999999999999999999999
Q ss_pred cccCccccCCCCC------cccccccccCCCcCCcccccC-------CCCCCchhhHhHHHHHHHHHhCCCCCCccccCC
Q 038098 435 DFGMAKPLLKEDQ------SLTQTQTLATIGYMAPEYGRE-------GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGD 501 (580)
Q Consensus 435 Dfg~a~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~ 501 (580)
|||+++.+..... ........||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.......
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 9999987643221 112234569999999999876 456788999999999999999977753321111
Q ss_pred chHHHHHHhhccc----chhhhcch-hccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 038098 502 MTLKHWVNDLLPI----SVMEIVDA-NLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLK 576 (580)
Q Consensus 502 ~~~~~~~~~~~~~----~~~~~~d~-~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~~ 576 (580)
.....+....... .....+.. ...............++.++.+++.+||+.||++|||++|+++.|+++...+.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~ 322 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWER 322 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHh
Confidence 1001111000000 01111111 111111111222345677899999999999999999999999999999999988
Q ss_pred hhcC
Q 038098 577 NVKR 580 (580)
Q Consensus 577 ~~~~ 580 (580)
+.++
T Consensus 323 ~~~~ 326 (336)
T 3g2f_A 323 NKSV 326 (336)
T ss_dssp ----
T ss_pred cccC
Confidence 8753
No 78
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.8e-43 Score=361.73 Aligned_cols=255 Identities=22% Similarity=0.301 Sum_probs=204.7
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc---cchhhhHHHHHHHHhhc-CCCCcceEEeeeecCCceee
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY---GRAFKSFDIECDMIKRI-RHRNIIKIISSCSSDDFKAL 365 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 365 (580)
.++|++.+.||+|+||.||+|+.+ +++.||+|++.... ......+..|..++.++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 367899999999999999999866 68899999997542 23345678899999887 89999999999999999999
Q ss_pred EeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCC
Q 038098 366 VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE 445 (580)
Q Consensus 366 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 445 (580)
||||+++|+|..++...+ .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 131 V~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 999999999999887644 5999999999999999999999 899999999999999999999999999999853222
Q ss_pred CCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCch---HHHHHHhhcccchhhhcch
Q 038098 446 DQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMT---LKHWVNDLLPISVMEIVDA 522 (580)
Q Consensus 446 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~ 522 (580)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||......+.. ...+.. ..+...
T Consensus 207 ~--~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~-------~~i~~~ 277 (396)
T 4dc2_A 207 G--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF-------QVILEK 277 (396)
T ss_dssp T--CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHH-------HHHHHC
T ss_pred C--CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHH-------HHHhcc
Confidence 2 2334567999999999999999999999999999999999999999653211100 000000 001110
Q ss_pred hccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCH------HHHHHH
Q 038098 523 NLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINA------KEIVTR 566 (580)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~------~ev~~~ 566 (580)
....+..++.++.+|+.+||+.||++||++ +|+++|
T Consensus 278 --------~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 278 --------QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp --------CCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred --------ccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 112234467789999999999999999985 677654
No 79
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=7.2e-43 Score=348.43 Aligned_cols=245 Identities=25% Similarity=0.308 Sum_probs=205.9
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc---cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY---GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
++|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+..|+.+++.++||||+++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 56889999999999999999865 69999999997542 234567788999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 447 (580)
||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~-- 159 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-- 159 (318)
T ss_dssp CCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC--
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCCc--
Confidence 9999999999997654 5899999999999999999999 999999999999999999999999999999865322
Q ss_pred cccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCC
Q 038098 448 SLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQ 527 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 527 (580)
.....||+.|+|||.+.+..++.++||||+||++|||++|+.||..... .... ..+....
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~--------~~i~~~~---- 219 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-----MKTY--------EKILNAE---- 219 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHH--------HHHHHCC----
T ss_pred ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-----HHHH--------HHHHhCC----
Confidence 2345799999999999999999999999999999999999999865211 1111 1111111
Q ss_pred cccccchhhhhHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 038098 528 KDEHFTTKGQCVSFIFNLAMKCTVESPEQRI-----NAKEIVTR 566 (580)
Q Consensus 528 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~ev~~~ 566 (580)
...+...+.++.+++.+|+..||++|| +++|+++|
T Consensus 220 ----~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 220 ----LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred ----CCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 112234567889999999999999999 89999865
No 80
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.1e-43 Score=348.42 Aligned_cols=261 Identities=27% Similarity=0.422 Sum_probs=198.2
Q ss_pred hcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEee
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 368 (580)
.++|++.+.||+|+||.||+|+.. ..||+|++.... ....+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEEEEE
Confidence 467899999999999999999865 469999986543 234567889999999999999999999664 556899999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCc
Q 038098 369 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS 448 (580)
Q Consensus 369 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 448 (580)
|+++++|.+++......+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++........
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 176 (289)
T 3og7_A 100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS 176 (289)
T ss_dssp CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceecccccccccc
Confidence 99999999999877778999999999999999999999 899999999999999999999999999999865433333
Q ss_pred ccccccccCCCcCCccccc---CCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhcc
Q 038098 449 LTQTQTLATIGYMAPEYGR---EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLL 525 (580)
Q Consensus 449 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 525 (580)
.......||+.|+|||.+. ...++.++||||+|+++|||++|+.||......+ ...... .....
T Consensus 177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~------------~~~~~ 243 (289)
T 3og7_A 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIEMV------------GRGSL 243 (289)
T ss_dssp -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH-HHHHHH------------HHTSC
T ss_pred ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH-HHHHHh------------ccccc
Confidence 3344557999999999886 5678889999999999999999999997532111 111111 11100
Q ss_pred CCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 038098 526 SQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRD 572 (580)
Q Consensus 526 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~ 572 (580)
... .......++.++.+++.+||+.||++||+++|+++.|+++.+
T Consensus 244 ~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 244 SPD--LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp CCC--TTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred Ccc--hhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 000 011224567889999999999999999999999999998753
No 81
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.7e-43 Score=353.76 Aligned_cols=271 Identities=22% Similarity=0.364 Sum_probs=218.4
Q ss_pred CHHHHHHHhcCCCcCceeccccCceEEEEEe------CCCCEEEEEEEecccc-chhhhHHHHHHHHhhc-CCCCcceEE
Q 038098 283 TYLEIFQATNGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVFDLQYG-RAFKSFDIECDMIKRI-RHRNIIKII 354 (580)
Q Consensus 283 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~ 354 (580)
...+.....++|.+.+.||+|+||.||+|.+ .+++.||||++..... .....+.+|++++.++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3444445567899999999999999999974 2468899999975432 3346788999999999 799999999
Q ss_pred eeeecCC-ceeeEeeccCCCChHHHhhcCCCC---------------CCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecC
Q 038098 355 SSCSSDD-FKALVLEYMPHGSLEKCLYSSNYI---------------LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 418 (580)
Q Consensus 355 ~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~---------------~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dl 418 (580)
+++...+ ..++||||+++|+|.+++...... +++..++.++.||++||.||| +.+|+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccccC
Confidence 9987654 589999999999999999865432 899999999999999999999 899999999
Q ss_pred CCCCEEeCCCCcEEEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCcc
Q 038098 419 KPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEI 497 (580)
Q Consensus 419 k~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~ 497 (580)
||+||+++.++.+||+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 99999999999999999999987654443334445568889999999998999999999999999999998 99998653
Q ss_pred ccCCchHHHHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038098 498 FFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575 (580)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~ 575 (580)
.... ..... +.... ....+..++.++.+++.+||+.||++||++.|++++|+++.+...
T Consensus 255 ~~~~-~~~~~------------~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 255 KIDE-EFCRR------------LKEGT------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp CCSH-HHHHH------------HHHTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred chhH-HHHHH------------hccCc------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 2211 11111 10000 111223456779999999999999999999999999999987653
No 82
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.3e-43 Score=355.69 Aligned_cols=262 Identities=26% Similarity=0.430 Sum_probs=214.5
Q ss_pred hcCCCcCceeccccCceEEEEEeC--------CCCEEEEEEEecccc-chhhhHHHHHHHHhhc-CCCCcceEEeeeecC
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ--------DGMEVAVKVFDLQYG-RAFKSFDIECDMIKRI-RHRNIIKIISSCSSD 360 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 360 (580)
.++|.+.+.||+|+||.||+|.+. +++.||+|++..... .....+..|+++++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 367888999999999999999863 467899999865432 3456788999999999 899999999999999
Q ss_pred CceeeEeeccCCCChHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEe
Q 038098 361 DFKALVLEYMPHGSLEKCLYSSN---------------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL 425 (580)
Q Consensus 361 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill 425 (580)
+..++||||+++|+|.+++.... ..+++..++.++.||++||+||| +.+|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEE
Confidence 99999999999999999998654 24899999999999999999999 8999999999999999
Q ss_pred CCCCcEEEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchH
Q 038098 426 DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTL 504 (580)
Q Consensus 426 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~ 504 (580)
+.++.+||+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||+| |+.||.....
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----- 265 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV----- 265 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH-----
Confidence 9999999999999987654433333344557889999999988889999999999999999999 9999865311
Q ss_pred HHHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038098 505 KHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575 (580)
Q Consensus 505 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~ 575 (580)
..... .+.... ....+..++.++.+++.+||+.||++||+++|++++|+++.....
T Consensus 266 ~~~~~---------~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 266 EELFK---------LLKEGH------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp HHHHH---------HHHHTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHHHH---------HHhcCC------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 11111 111100 111234567789999999999999999999999999999987653
No 83
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=5.9e-44 Score=374.66 Aligned_cols=257 Identities=23% Similarity=0.402 Sum_probs=212.4
Q ss_pred HhcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeec
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEY 369 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 369 (580)
..++|...+.||+|+||.||+|.++++..||||++.... ...+.+.+|++++++++||||+++++++. .+..++||||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~ 263 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEF 263 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECC
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEee
Confidence 346788889999999999999999888999999997543 34678999999999999999999999987 5678999999
Q ss_pred cCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCc
Q 038098 370 MPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS 448 (580)
Q Consensus 370 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 448 (580)
+++|+|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...... .
T Consensus 264 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~-~ 339 (454)
T 1qcf_A 264 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-Y 339 (454)
T ss_dssp CTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH-H
T ss_pred cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc-e
Confidence 99999999997543 36899999999999999999999 8999999999999999999999999999998653221 1
Q ss_pred ccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhccCC
Q 038098 449 LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQ 527 (580)
Q Consensus 449 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 527 (580)
.......+|..|+|||.+..+.++.++|||||||++|||+| |+.||...... .... .+...
T Consensus 340 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--~~~~------------~i~~~---- 401 (454)
T 1qcf_A 340 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIR------------ALERG---- 401 (454)
T ss_dssp HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHH------------HHHHT----
T ss_pred eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--HHHH------------HHHcC----
Confidence 11233446788999999998999999999999999999999 99998653111 1111 11111
Q ss_pred cccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 038098 528 KDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRD 572 (580)
Q Consensus 528 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~ 572 (580)
.+...+..++.++.+++.+||+.||++|||+++|++.|+++..
T Consensus 402 --~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 402 --YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp --CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred --CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 1122345677889999999999999999999999999988754
No 84
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.9e-43 Score=358.99 Aligned_cols=249 Identities=23% Similarity=0.311 Sum_probs=204.4
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc---cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY---GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
++|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 56889999999999999999865 68899999996542 334567889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 447 (580)
||+.+|+|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++.+...
T Consensus 95 e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-- 168 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQN-VHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-- 168 (384)
T ss_dssp CCCTTEEHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT--
T ss_pred ecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCC--
Confidence 999999999998764 45999999999999999999999 999999999999999999999999999999866332
Q ss_pred cccccccccCCCcCCcccccC---CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhc
Q 038098 448 SLTQTQTLATIGYMAPEYGRE---GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANL 524 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 524 (580)
.......||+.|+|||++.. ..++.++||||+||++|||++|+.||...... ........ +...
T Consensus 169 -~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~--~~~~~~~~---------~~~~- 235 (384)
T 4fr4_A 169 -TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST--SSKEIVHT---------FETT- 235 (384)
T ss_dssp -CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS--CHHHHHHH---------HHHC-
T ss_pred -CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc--cHHHHHHH---------Hhhc-
Confidence 22345679999999999864 45899999999999999999999999753211 11111110 0000
Q ss_pred cCCcccccchhhhhHHHHHHHHhhccCCCCCCCCC-HHHHHH
Q 038098 525 LSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRIN-AKEIVT 565 (580)
Q Consensus 525 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-~~ev~~ 565 (580)
....+..++.++.+|+.+||+.||++||+ ++++.+
T Consensus 236 ------~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 236 ------VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp ------CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred ------ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 11123345678999999999999999998 777665
No 85
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.7e-43 Score=345.64 Aligned_cols=250 Identities=28% Similarity=0.424 Sum_probs=195.7
Q ss_pred cCCCcCceeccccCceEEEEEeCCCCEEEEEEEecccc----chhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYG----RAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
++|+..+.||+|+||.||+|.+. |+.||||++..... ...+.+.+|+++++.++||||+++++++...+..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 57888999999999999999986 89999999864422 33467889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC---eEEecCCCCCEEeCC--------CCcEEEccc
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP---IIHCDLKPSNVLLDD--------NMVAHLSDF 436 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~---i~H~dlk~~Nill~~--------~~~~kl~Df 436 (580)
||+++++|.+++.. ..+++..++.++.|++.|++||| +.+ |+||||||+||+++. ++.+||+||
T Consensus 86 e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 86 EFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp ECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 99999999998864 45899999999999999999999 666 999999999999986 778999999
Q ss_pred cCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccch
Q 038098 437 GMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISV 516 (580)
Q Consensus 437 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 516 (580)
|+++...... .....||+.|+|||.+.+..++.++||||+|+++|||++|+.||....... ...
T Consensus 161 g~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~---------- 224 (271)
T 3dtc_A 161 GLAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA--VAY---------- 224 (271)
T ss_dssp CC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH--HHH----------
T ss_pred Cccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHH----------
Confidence 9998653322 224468999999999998899999999999999999999999986531110 000
Q ss_pred hhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 038098 517 MEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570 (580)
Q Consensus 517 ~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~ 570 (580)
..... ......+..++.++.+++.+||+.||++||+++|++++|+++
T Consensus 225 -~~~~~------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 225 -GVAMN------KLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -HHHTS------CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -hhhcC------CCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 00000 011122345677899999999999999999999999999864
No 86
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-43 Score=365.16 Aligned_cols=260 Identities=21% Similarity=0.270 Sum_probs=208.5
Q ss_pred HHHHHhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc---cchhhhHHHHHHHHhhcCCCCcceEEeeeecCC
Q 038098 286 EIFQATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY---GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDD 361 (580)
Q Consensus 286 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 361 (580)
+.....++|+..+.||+|+||.||+|+.+ +|+.||+|++.... ......+..|..++..++||||+++++++.+.+
T Consensus 55 ~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~ 134 (412)
T 2vd5_A 55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDEN 134 (412)
T ss_dssp HHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred hccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC
Confidence 33345678999999999999999999875 79999999996531 234456889999999999999999999999999
Q ss_pred ceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccc
Q 038098 362 FKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 441 (580)
Q Consensus 362 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~ 441 (580)
..++||||+++|+|.+++...+..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 135 ~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla~~ 211 (412)
T 2vd5_A 135 YLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCLK 211 (412)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhhee
Confidence 999999999999999999876667999999999999999999999 89999999999999999999999999999986
Q ss_pred cCCCCCcccccccccCCCcCCccccc-------CCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhccc
Q 038098 442 LLKEDQSLTQTQTLATIGYMAPEYGR-------EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPI 514 (580)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~y~aPE~~~-------~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 514 (580)
...... .......||+.|+|||++. ...++.++|||||||++|||++|+.||..... .....
T Consensus 212 ~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-----~~~~~----- 280 (412)
T 2vd5_A 212 LRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST-----AETYG----- 280 (412)
T ss_dssp CCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHH-----
T ss_pred ccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH-----HHHHH-----
Confidence 643322 2233457999999999887 45789999999999999999999999965211 11111
Q ss_pred chhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCC---CCHHHHHHH
Q 038098 515 SVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQR---INAKEIVTR 566 (580)
Q Consensus 515 ~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R---ps~~ev~~~ 566 (580)
.++........ ......++.++.+|+.+||. +|++| |+++|+++|
T Consensus 281 ---~i~~~~~~~~~---p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 281 ---KIVHYKEHLSL---PLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp ---HHHTHHHHCCC---C----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred ---HHHhcccCcCC---CccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 11110000000 00123467789999999999 99998 589999875
No 87
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.4e-43 Score=349.28 Aligned_cols=271 Identities=23% Similarity=0.399 Sum_probs=211.6
Q ss_pred cCCCcCceeccccCceEEEEEe-----CCCCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecC--Cce
Q 038098 292 NGFSENNLIGRGGFGSVYKARI-----QDGMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSD--DFK 363 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 363 (580)
..|+..+.||+|+||.||+|++ .+++.||+|++.... ......+.+|++++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4578889999999999999984 368899999996443 33457789999999999999999999999876 668
Q ss_pred eeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccC
Q 038098 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 443 (580)
Q Consensus 364 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 443 (580)
++||||+++|+|.+++......+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999999999777777999999999999999999999 8999999999999999999999999999998764
Q ss_pred CCCCc-ccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccc-hhhhcc
Q 038098 444 KEDQS-LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPIS-VMEIVD 521 (580)
Q Consensus 444 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~d 521 (580)
..... .......+|..|+|||.+.+..++.++||||+|+++|||+||+.|+..... ............. ......
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMA---LFLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH---HHHHHHCSCCGGGHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhh---HHhhccCCcccccCHHHHHH
Confidence 43321 223345688889999999988999999999999999999999998643210 0000000000000 111111
Q ss_pred hhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 038098 522 ANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIR 571 (580)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~ 571 (580)
. ... ......+..++.++.+++.+||+.||++|||++|+++.|+++.
T Consensus 255 ~-~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 255 T-LKE--GKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp H-HHT--TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred H-Hhc--cCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 1 111 1122234567788999999999999999999999999999875
No 88
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.3e-43 Score=347.22 Aligned_cols=250 Identities=25% Similarity=0.340 Sum_probs=198.3
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc--------------------------chhhhHHHHHHHHh
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG--------------------------RAFKSFDIECDMIK 343 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~e~~~l~ 343 (580)
.++|.+.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 367999999999999999999864 689999999864421 12356889999999
Q ss_pred hcCCCCcceEEeeeec--CCceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCC
Q 038098 344 RIRHRNIIKIISSCSS--DDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPS 421 (580)
Q Consensus 344 ~l~h~niv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~ 421 (580)
+++||||+++++++.. .+..++||||+++++|.+++.. ..+++..++.++.||++||+||| +.+|+||||||+
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~ 166 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPS 166 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHH
Confidence 9999999999999976 5678999999999999886543 46999999999999999999999 899999999999
Q ss_pred CEEeCCCCcEEEccccCccccCCCCCcccccccccCCCcCCcccccCCC---CCCchhhHhHHHHHHHHHhCCCCCCccc
Q 038098 422 NVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQ---VSTNGDVYSFGIMLMETFTRKKPTDEIF 498 (580)
Q Consensus 422 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~Dvws~Gvil~elltg~~p~~~~~ 498 (580)
||+++.++.+||+|||+++....... ......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 99999999999999999986643322 233457999999999987655 4788999999999999999999986521
Q ss_pred cCCchHHHHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 499 FGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
...+... +... .. .......++.++.+++.+||+.||++||+++|+++|
T Consensus 245 -----~~~~~~~--------~~~~-~~-----~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 245 -----IMCLHSK--------IKSQ-AL-----EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp -----HHHHHHH--------HHHC-CC-----CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred -----HHHHHHH--------Hhcc-cC-----CCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 1111110 0000 00 111123456789999999999999999999999875
No 89
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2.8e-43 Score=355.00 Aligned_cols=266 Identities=23% Similarity=0.382 Sum_probs=216.9
Q ss_pred HhcCCCcCceeccccCceEEEEEeC-CC-----CEEEEEEEecccc-chhhhHHHHHHHHhhc-CCCCcceEEeeeecCC
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQ-DG-----MEVAVKVFDLQYG-RAFKSFDIECDMIKRI-RHRNIIKIISSCSSDD 361 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~-----~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 361 (580)
..++|...+.||+|+||.||+|... ++ ..||+|++..... .....+.+|+++++++ +||||+++++++...+
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 3467889999999999999999864 23 4799999965432 3456788999999999 8999999999999999
Q ss_pred ceeeEeeccCCCChHHHhhcC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCC
Q 038098 362 FKALVLEYMPHGSLEKCLYSS-------------NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN 428 (580)
Q Consensus 362 ~~~lv~e~~~~g~L~~~l~~~-------------~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~ 428 (580)
..++||||+++|+|.+++... ...+++..++.++.||+.||+||| +.+|+||||||+||+++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEECCC
Confidence 999999999999999998753 235799999999999999999999 8999999999999999999
Q ss_pred CcEEEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHH
Q 038098 429 MVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHW 507 (580)
Q Consensus 429 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~ 507 (580)
+.+||+|||+++...............+|+.|+|||.+.+..++.++|||||||++|||+| |..||....... .....
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~~~ 279 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-KFYKL 279 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-HHHHH
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-HHHHH
Confidence 9999999999986644433333344567889999999988899999999999999999999 999986532111 11111
Q ss_pred HHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhh
Q 038098 508 VNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLKN 577 (580)
Q Consensus 508 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~~~ 577 (580)
.. ... ....+..++..+.+++.+||+.||++||+++|++++|+++..+..++
T Consensus 280 ~~------------~~~------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~~ 331 (333)
T 2i1m_A 280 VK------------DGY------QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRRE 331 (333)
T ss_dssp HH------------HTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHH
T ss_pred Hh------------cCC------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhhcc
Confidence 11 110 11122345677899999999999999999999999999998887664
No 90
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=8.8e-44 Score=351.19 Aligned_cols=251 Identities=22% Similarity=0.332 Sum_probs=204.8
Q ss_pred cCCCcCceeccccCceEEEEEeC-CC-------CEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCce
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DG-------MEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFK 363 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 363 (580)
++|...+.||+|+||.||+|... ++ ..||+|++........+.+.+|++++++++||||+++++++...+..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 56888999999999999999854 33 46999999766666668899999999999999999999999999999
Q ss_pred eeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCc--------EEEcc
Q 038098 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMV--------AHLSD 435 (580)
Q Consensus 364 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~--------~kl~D 435 (580)
++||||+++|+|.+++...+..+++..++.++.||++||.||| +.+|+||||||+||+++.++. +||+|
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D 164 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred EEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeecc
Confidence 9999999999999999887777999999999999999999999 899999999999999998887 99999
Q ss_pred ccCccccCCCCCcccccccccCCCcCCcccccC-CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhccc
Q 038098 436 FGMAKPLLKEDQSLTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPI 514 (580)
Q Consensus 436 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 514 (580)
||++..... .....+|..|+|||.+.+ ..++.++|||||||++|||++|..|+....... .......
T Consensus 165 fg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~-~~~~~~~----- 232 (289)
T 4fvq_A 165 PGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ-RKLQFYE----- 232 (289)
T ss_dssp CCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHH-----
T ss_pred CcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH-HHHHHhh-----
Confidence 999975422 123457889999999887 678999999999999999999655543211100 0000000
Q ss_pred chhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 038098 515 SVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRD 572 (580)
Q Consensus 515 ~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~ 572 (580)
. ....+...+.++.+++.+||+.||++|||++|++++|+++..
T Consensus 233 -------~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 233 -------D--------RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp -------T--------TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred -------c--------cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 0 000111224457899999999999999999999999998754
No 91
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.3e-43 Score=355.59 Aligned_cols=251 Identities=22% Similarity=0.313 Sum_probs=205.6
Q ss_pred HHhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc---cchhhhHHHHHHHHhhc-CCCCcceEEeeeecCCce
Q 038098 289 QATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY---GRAFKSFDIECDMIKRI-RHRNIIKIISSCSSDDFK 363 (580)
Q Consensus 289 ~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 363 (580)
...++|...+.||+|+||.||+|+.+ +|+.||+|++.... ......+..|.+++..+ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 34578999999999999999999975 68999999997542 23456678899999887 899999999999999999
Q ss_pred eeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccC
Q 038098 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 443 (580)
Q Consensus 364 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 443 (580)
++||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 169 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENM 169 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhcc
Confidence 99999999999999987644 5899999999999999999999 8999999999999999999999999999998542
Q ss_pred CCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchh
Q 038098 444 KEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDAN 523 (580)
Q Consensus 444 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 523 (580)
... .......||+.|+|||.+.+..++.++||||+||++|||++|+.||..... ...... +..
T Consensus 170 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~--------i~~-- 232 (345)
T 1xjd_A 170 LGD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE-----EELFHS--------IRM-- 232 (345)
T ss_dssp CTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH--------HHH--
T ss_pred cCC--CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH-----HHHHHH--------HHh--
Confidence 222 123456799999999999999999999999999999999999999865211 111110 100
Q ss_pred ccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHH-HHHHH
Q 038098 524 LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAK-EIVTR 566 (580)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~-ev~~~ 566 (580)
.. ...+..++.++.+++.+||..||++||++. |+++|
T Consensus 233 --~~----~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 233 --DN----PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp --CC----CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred --CC----CCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 00 111234567889999999999999999997 66643
No 92
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=5.1e-43 Score=354.71 Aligned_cols=252 Identities=23% Similarity=0.284 Sum_probs=191.8
Q ss_pred HhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEee
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 368 (580)
..+.|.+.+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 3467999999999999999999976 58899999997542 34567889999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCC---CCcEEEccccCccccCCC
Q 038098 369 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMAKPLLKE 445 (580)
Q Consensus 369 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~---~~~~kl~Dfg~a~~~~~~ 445 (580)
|+++|+|.+++...+ .+++..++.++.||+.||.||| +.+|+||||||+||+++. ++.+||+|||+++.....
T Consensus 129 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 129 LVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred eCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 999999999987654 5899999999999999999999 899999999999999975 889999999999865322
Q ss_pred CCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhcc
Q 038098 446 DQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLL 525 (580)
Q Consensus 446 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 525 (580)
. ......||+.|+|||.+.+..++.++|||||||++|||++|+.||............ +.....
T Consensus 205 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~------------i~~~~~- 268 (349)
T 2w4o_A 205 V---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRR------------ILNCEY- 268 (349)
T ss_dssp -----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHH------------HHTTCC-
T ss_pred c---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHH------------HHhCCC-
Confidence 1 223456899999999999989999999999999999999999998652211101111 111100
Q ss_pred CCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 526 SQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 526 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.........++.++.+|+.+||+.||++||++.|+++|
T Consensus 269 ---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 269 ---YFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp ---CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ---ccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00011223567789999999999999999999999875
No 93
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6e-43 Score=354.39 Aligned_cols=260 Identities=22% Similarity=0.303 Sum_probs=204.6
Q ss_pred HHHHhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecc-----ccchhhhHHHHHHHHhhcCCCCcceEEeeeecC
Q 038098 287 IFQATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQ-----YGRAFKSFDIECDMIKRIRHRNIIKIISSCSSD 360 (580)
Q Consensus 287 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 360 (580)
+....++|.+.+.||+|+||.||+|... +++.||+|++... .....+.+..|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 4566788999999999999999999864 6889999998654 234557889999999999999999999999999
Q ss_pred CceeeEeeccCCCChHHHhhcC---------------------------------------CCCCCHHHHHHHHHHHHHH
Q 038098 361 DFKALVLEYMPHGSLEKCLYSS---------------------------------------NYILDIFQRLNIMIDVASA 401 (580)
Q Consensus 361 ~~~~lv~e~~~~g~L~~~l~~~---------------------------------------~~~~~~~~~~~i~~~i~~~ 401 (580)
+..++||||+++|+|.+++... ...+++..++.++.||+.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 9999999999999999988521 1224677888999999999
Q ss_pred HHHHhcCCCCCeEEecCCCCCEEeCCCC--cEEEccccCccccCCCCC--cccccccccCCCcCCcccccC--CCCCCch
Q 038098 402 LEYLHFGYSVPIIHCDLKPSNVLLDDNM--VAHLSDFGMAKPLLKEDQ--SLTQTQTLATIGYMAPEYGRE--GQVSTNG 475 (580)
Q Consensus 402 l~~Lh~~~~~~i~H~dlk~~Nill~~~~--~~kl~Dfg~a~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~--~~~~~~~ 475 (580)
|+||| +.+|+||||||+||+++.++ .+||+|||+++.+..... ........||+.|+|||.+.+ ..++.++
T Consensus 181 l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 99999 89999999999999998776 899999999986533221 112345679999999999865 6789999
Q ss_pred hhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCC
Q 038098 476 DVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPE 555 (580)
Q Consensus 476 Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~ 555 (580)
|||||||++|||++|+.||...... .. ...+..... .........++.++.+++.+||+.||+
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~-----~~--------~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~ 320 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDA-----DT--------ISQVLNKKL----CFENPNYNVLSPLARDLLSNLLNRNVD 320 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHH-----HH--------HHHHHHCCC----CTTSGGGGGSCHHHHHHHHHHSCSCTT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChH-----HH--------HHHHHhccc----ccCCcccccCCHHHHHHHHHHcCCChh
Confidence 9999999999999999998653211 00 111111111 011122234677899999999999999
Q ss_pred CCCCHHHHHHH
Q 038098 556 QRINAKEIVTR 566 (580)
Q Consensus 556 ~Rps~~ev~~~ 566 (580)
+||++.|+++|
T Consensus 321 ~Rps~~~~l~h 331 (345)
T 3hko_A 321 ERFDAMRALQH 331 (345)
T ss_dssp TSCCHHHHHHS
T ss_pred HCCCHHHHhcC
Confidence 99999999985
No 94
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-43 Score=353.52 Aligned_cols=259 Identities=23% Similarity=0.378 Sum_probs=204.6
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEE----EEEEEecc-ccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceee
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEV----AVKVFDLQ-YGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKAL 365 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~v----avK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 365 (580)
++|+..+.||+|+||.||+|.+. +++.| |+|.+... .......+.+|+.++++++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 57889999999999999999864 45554 66666433 2345678899999999999999999999998755 789
Q ss_pred EeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCC
Q 038098 366 VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE 445 (580)
Q Consensus 366 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 445 (580)
|+||+.+|+|.+++......+++..++.++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 94 v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 99999999999999887778999999999999999999999 899999999999999999999999999999876544
Q ss_pred CCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhc
Q 038098 446 DQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANL 524 (580)
Q Consensus 446 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 524 (580)
..........+|+.|+|||.+.+..++.++|||||||++|||++ |+.||+..... ... ..+....
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~------------~~~~~~~ 236 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EIS------------SILEKGE 236 (327)
T ss_dssp ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHH------------HHHHTTC
T ss_pred cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHH------------HHHHcCC
Confidence 43333444557889999999999999999999999999999999 99998763221 111 1111111
Q ss_pred cCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 038098 525 LSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574 (580)
Q Consensus 525 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~ 574 (580)
....+..++.++.+++.+||+.||++||+++|+++.|+++.+.-
T Consensus 237 ------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 237 ------RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp ------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred ------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 11223456778999999999999999999999999999987543
No 95
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3.6e-44 Score=359.77 Aligned_cols=269 Identities=21% Similarity=0.383 Sum_probs=217.2
Q ss_pred HHHHHHhcCCCcCceeccccCceEEEEEeC------CCCEEEEEEEecccc-chhhhHHHHHHHHhhcCCCCcceEEeee
Q 038098 285 LEIFQATNGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFDLQYG-RAFKSFDIECDMIKRIRHRNIIKIISSC 357 (580)
Q Consensus 285 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~ 357 (580)
.+.....++|.+.+.||+|+||.||+|.+. +++.||+|++..... .....+.+|++++++++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 344455678999999999999999999754 367899999864432 3345688999999999999999999999
Q ss_pred ecCCceeeEeeccCCCChHHHhhcCC---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCC
Q 038098 358 SSDDFKALVLEYMPHGSLEKCLYSSN---------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN 428 (580)
Q Consensus 358 ~~~~~~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~ 428 (580)
...+..++||||+++|+|.+++...+ ..+++..++.++.||+.||.||| +.+|+||||||+||+++.+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~ 174 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 174 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTT
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCC
Confidence 99999999999999999999987532 45799999999999999999999 8999999999999999999
Q ss_pred CcEEEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHH
Q 038098 429 MVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHW 507 (580)
Q Consensus 429 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~ 507 (580)
+.+||+|||+++...............+|+.|+|||.+.+..++.++||||+|+++|||+| |+.||..... ...
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~~~ 249 (322)
T 1p4o_A 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN-----EQV 249 (322)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH-----HHH
T ss_pred CeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH-----HHH
Confidence 9999999999986644333333344567889999999988899999999999999999999 8889865211 111
Q ss_pred HHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 038098 508 VNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLK 576 (580)
Q Consensus 508 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~~ 576 (580)
... +.... ....+..++..+.+++.+||+.||++||++.|++++|+++.....+
T Consensus 250 ~~~--------~~~~~-------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~ 303 (322)
T 1p4o_A 250 LRF--------VMEGG-------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFR 303 (322)
T ss_dssp HHH--------HHTTC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHH
T ss_pred HHH--------HHcCC-------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCc
Confidence 110 11110 1112345677899999999999999999999999999887554433
No 96
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.1e-43 Score=346.84 Aligned_cols=255 Identities=29% Similarity=0.430 Sum_probs=201.7
Q ss_pred cCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeeccC
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEYMP 371 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 371 (580)
++|++.+.||+|+||.||+|++. ++.||+|++... ...+.+..|++++++++||||+++++++.+ ..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 56888899999999999999986 789999998533 345778999999999999999999999874 4789999999
Q ss_pred CCChHHHhhcCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCc-EEEccccCccccCCCCCc
Q 038098 372 HGSLEKCLYSSNY--ILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMV-AHLSDFGMAKPLLKEDQS 448 (580)
Q Consensus 372 ~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~-~kl~Dfg~a~~~~~~~~~ 448 (580)
+|+|.+++..... .+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++......
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--- 159 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence 9999999986553 4789999999999999999999322289999999999999998886 799999999755322
Q ss_pred ccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCCc
Q 038098 449 LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQK 528 (580)
Q Consensus 449 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 528 (580)
.....||+.|+|||.+.+..++.++||||||+++|||+||+.||+........ ..|.. ..
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~~~~----------~~------- 219 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR-IMWAV----------HN------- 219 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHH-HHHHH----------HT-------
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHH-HHHHH----------hc-------
Confidence 22345899999999999999999999999999999999999999753211110 01100 00
Q ss_pred ccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 038098 529 DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574 (580)
Q Consensus 529 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~ 574 (580)
.........++..+.+++.+||+.||++||+++|++++|+.+.+.+
T Consensus 220 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 220 GTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp TCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred CCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 0011122346678999999999999999999999999999987654
No 97
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.5e-43 Score=343.40 Aligned_cols=263 Identities=22% Similarity=0.367 Sum_probs=214.6
Q ss_pred cCCCcCc-eeccccCceEEEEEeC---CCCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeE
Q 038098 292 NGFSENN-LIGRGGFGSVYKARIQ---DGMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALV 366 (580)
Q Consensus 292 ~~~~~~~-~lg~G~~g~v~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 366 (580)
++|.+.+ .||+|+||.||+|.+. ++..||+|++.... ....+.+.+|++++++++||||+++++++. .+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCcEEE
Confidence 4455555 8999999999999753 57789999997543 234567889999999999999999999994 5668999
Q ss_pred eeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCC
Q 038098 367 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED 446 (580)
Q Consensus 367 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 446 (580)
|||+++++|.+++......+++..++.++.||++||.||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 9999999999999877778999999999999999999999 8999999999999999999999999999998764333
Q ss_pred Cc-ccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhc
Q 038098 447 QS-LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANL 524 (580)
Q Consensus 447 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 524 (580)
.. .......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||..... ......+. ..
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~i~------------~~- 229 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAFIE------------QG- 229 (287)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--HHHHHHHH------------TT-
T ss_pred ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHh------------cC-
Confidence 21 11233456889999999988889999999999999999999 9999865321 11111111 00
Q ss_pred cCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhhh
Q 038098 525 LSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLKNV 578 (580)
Q Consensus 525 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~~~~ 578 (580)
.....+..++.++.+++.+||+.||++||++.|++++|+++..+.....
T Consensus 230 -----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~ 278 (287)
T 1u59_A 230 -----KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV 278 (287)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTC
T ss_pred -----CcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcc
Confidence 0112234567889999999999999999999999999999988876543
No 98
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.9e-43 Score=343.26 Aligned_cols=250 Identities=24% Similarity=0.399 Sum_probs=188.2
Q ss_pred hcCCCcCceeccccCceEEEEEe-CCCCEEEEEEEeccc---cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeE
Q 038098 291 TNGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFDLQY---GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALV 366 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 366 (580)
.++|.+.+.||+|+||.||+|.. .+|+.||+|++.... ......+.+|++++++++||||+++++++...+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35788999999999999999986 479999999996542 22346788999999999999999999999999999999
Q ss_pred eeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCC
Q 038098 367 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED 446 (580)
Q Consensus 367 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 446 (580)
|||+++++|.+++......+++..++.++.|+++||+||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 9999999999999887778999999999999999999999 8999999999999999999999999999998654322
Q ss_pred CcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccC
Q 038098 447 QSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLS 526 (580)
Q Consensus 447 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 526 (580)
. ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||....... . ...+. .
T Consensus 167 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~--------~~~~~----~- 226 (278)
T 3cok_A 167 E--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN-----T--------LNKVV----L- 226 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------------CC----S-
T ss_pred C--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH-----H--------HHHHh----h-
Confidence 1 2234568999999999998889999999999999999999999987532110 0 00000 0
Q ss_pred CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 527 QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 527 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.....+..++.++.+++.+||+.||++||+++|+++|
T Consensus 227 ---~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 227 ---ADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp ---SCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ---cccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 0112233456788999999999999999999999875
No 99
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.2e-42 Score=347.73 Aligned_cols=269 Identities=23% Similarity=0.300 Sum_probs=192.2
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEee
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 368 (580)
.++|+..+.||+|+||.||+|... +|+.||+|++.... ......+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467899999999999999999865 68999999996543 2344678899999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccC
Q 038098 369 YMPHGSLEKCLYSSN-----YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 443 (580)
Q Consensus 369 ~~~~g~L~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 443 (580)
|++ |+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 59999886532 45899999999999999999999 8999999999999999999999999999998663
Q ss_pred CCCCcccccccccCCCcCCcccccC-CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhc--ccc-hhhh
Q 038098 444 KEDQSLTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLL--PIS-VMEI 519 (580)
Q Consensus 444 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~--~~~-~~~~ 519 (580)
.... ......+|+.|+|||.+.+ ..++.++||||+||++|||+||+.||...... ..+........ ... ....
T Consensus 160 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 160 IPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE-EQLKLIFDIMGTPNESLWPSV 236 (317)
T ss_dssp SCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCTTTCGGG
T ss_pred CCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCChhHhhhh
Confidence 3221 2334568999999999876 46899999999999999999999999753211 11111111100 000 0000
Q ss_pred c-----chhccCCcccc------cchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 520 V-----DANLLSQKDEH------FTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 520 ~-----d~~~~~~~~~~------~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
. ........... .......+.++.+++.+||+.||++|||++|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0 00000000000 00112456789999999999999999999999875
No 100
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.1e-43 Score=373.95 Aligned_cols=256 Identities=23% Similarity=0.398 Sum_probs=213.4
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeec
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEY 369 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 369 (580)
.++|...+.||+|+||.||+|.+. ++..||||++.... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 356888899999999999999976 48899999986543 3457889999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCc
Q 038098 370 MPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS 448 (580)
Q Consensus 370 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 448 (580)
+++|+|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...... .
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~ 373 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT-Y 373 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC-E
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCc-e
Confidence 99999999998643 56899999999999999999999 8999999999999999999999999999998664322 2
Q ss_pred ccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhccCC
Q 038098 449 LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQ 527 (580)
Q Consensus 449 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 527 (580)
.......++..|+|||.+....++.++|||||||++|||+| |..||...... .. .+.+...
T Consensus 374 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~------------~~~~~~~---- 435 (495)
T 1opk_A 374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QV------------YELLEKD---- 435 (495)
T ss_dssp ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GH------------HHHHHTT----
T ss_pred eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HH------------HHHHHcC----
Confidence 22234456788999999998899999999999999999999 99998653211 11 1111111
Q ss_pred cccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 038098 528 KDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIR 571 (580)
Q Consensus 528 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~ 571 (580)
.+...+..++.++.+|+.+||+.||++||+++++++.|+.+.
T Consensus 436 --~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 436 --YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred --CCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 112234567788999999999999999999999999998763
No 101
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.5e-42 Score=340.07 Aligned_cols=251 Identities=22% Similarity=0.282 Sum_probs=206.9
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeec
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEY 369 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 369 (580)
.++|++.+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 456899999999999999999865 5789999999876666678899999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEe---CCCCcEEEccccCccccCCCC
Q 038098 370 MPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLLKED 446 (580)
Q Consensus 370 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill---~~~~~~kl~Dfg~a~~~~~~~ 446 (580)
+++++|.+++...+ .+++..++.++.|++.||+||| +.+|+||||||+||++ +.++.++|+|||++.......
T Consensus 88 ~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 88 CTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 99999999887644 5899999999999999999999 9999999999999999 788999999999998664322
Q ss_pred CcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccC
Q 038098 447 QSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLS 526 (580)
Q Consensus 447 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 526 (580)
......||+.|+|||.+.+ .++.++||||+|+++|||++|+.||......+ ..... .. .
T Consensus 164 ---~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~------------~~----~ 222 (277)
T 3f3z_A 164 ---MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSE-VMLKI------------RE----G 222 (277)
T ss_dssp ---CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHH------------HH----C
T ss_pred ---chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHH-HHHHH------------Hh----C
Confidence 2334569999999998865 58999999999999999999999986532110 00000 00 0
Q ss_pred CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 527 QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 527 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
...........++.++.+++.+||+.||++||++.|+++|
T Consensus 223 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 223 TFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred CCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000111123467789999999999999999999999875
No 102
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.3e-43 Score=348.19 Aligned_cols=245 Identities=21% Similarity=0.237 Sum_probs=196.8
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc--chhhhHHHHHHHHhhc-CCCCcceEEeeeecCCceeeEe
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG--RAFKSFDIECDMIKRI-RHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 367 (580)
++|+..+.||+|+||+||+|... +|+.||||++..... ........|+..+.++ +||||+++++++.+.+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 56999999999999999999876 799999999854322 2234455566666555 8999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 447 (580)
||+ +++|.+++...+..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||++.......
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~- 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG- 211 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC-
Confidence 999 66999998877778999999999999999999999 8999999999999999999999999999998653322
Q ss_pred cccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCC
Q 038098 448 SLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQ 527 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 527 (580)
......||+.|+|||++.+ .++.++|||||||++|||++|..|+... .....+ ....
T Consensus 212 --~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~~~------------~~~~---- 268 (311)
T 3p1a_A 212 --AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----EGWQQL------------RQGY---- 268 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHHHHH------------TTTC----
T ss_pred --CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHHHH------------hccC----
Confidence 2334568999999998875 7899999999999999999997775431 111111 0000
Q ss_pred cccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 528 KDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 528 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.....+..++.++.+++.+||+.||++|||++|+++|
T Consensus 269 --~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 269 --LPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp --CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred --CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 0112234567889999999999999999999999875
No 103
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.3e-43 Score=351.22 Aligned_cols=272 Identities=26% Similarity=0.433 Sum_probs=217.0
Q ss_pred cCCCcCceeccccCceEEEEEe-----CCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCC--cee
Q 038098 292 NGFSENNLIGRGGFGSVYKARI-----QDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDD--FKA 364 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~ 364 (580)
++|.+.+.||+|+||.||+|++ .+|+.||||++..........+.+|++++++++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 5688889999999999999984 368899999997665566678999999999999999999999986544 789
Q ss_pred eEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCC
Q 038098 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLK 444 (580)
Q Consensus 365 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 444 (580)
+||||+++++|.+++...+..+++..++.++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~ 197 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197 (326)
T ss_dssp EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence 999999999999999887777999999999999999999999 89999999999999999999999999999987644
Q ss_pred CCCcc-cccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcc-----cchhh
Q 038098 445 EDQSL-TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLP-----ISVME 518 (580)
Q Consensus 445 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~-----~~~~~ 518 (580)
..... ......++..|+|||.+.+..++.++||||||+++|||+||..|+..... ........... ..+.+
T Consensus 198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 274 (326)
T 2w1i_A 198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA---EFMRMIGNDKQGQMIVFHLIE 274 (326)
T ss_dssp SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH---HHHHHHCTTCCTHHHHHHHHH
T ss_pred cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH---HHHHhhccccchhhhHHHHHH
Confidence 33211 12334577789999999888899999999999999999999998754210 00000000000 00111
Q ss_pred hcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038098 519 IVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575 (580)
Q Consensus 519 ~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~ 575 (580)
.+... .....+..++.++.+++.+||+.||++||++.|+++.|+++.+++.
T Consensus 275 ~~~~~------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~ 325 (326)
T 2w1i_A 275 LLKNN------GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325 (326)
T ss_dssp HHHTT------CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HhhcC------CCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 11111 1122345677889999999999999999999999999999998875
No 104
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=3e-43 Score=343.88 Aligned_cols=251 Identities=24% Similarity=0.377 Sum_probs=206.2
Q ss_pred cCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecC--CceeeEe
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSD--DFKALVL 367 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~ 367 (580)
++|...+.||+|+||.||+|+++ ++.||||++.... ....+.+.+|+.++++++||||+++++++... +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 56888999999999999999986 8899999997543 23446788999999999999999999999876 7789999
Q ss_pred eccCCCChHHHhhcCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEEecCCCCCEEeCCCCcEEEccccCccccCC
Q 038098 368 EYMPHGSLEKCLYSSNY-ILDIFQRLNIMIDVASALEYLHFGYSVP--IIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLK 444 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~Lh~~~~~~--i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 444 (580)
||+++|+|.+++..... .+++..++.++.||++||+||| +.+ ++||||||+||+++.++.++|+|||++....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~- 164 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ- 164 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS-
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeeec-
Confidence 99999999999987653 5899999999999999999999 888 9999999999999999999999999876432
Q ss_pred CCCcccccccccCCCcCCcccccCCCCCC---chhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcc
Q 038098 445 EDQSLTQTQTLATIGYMAPEYGREGQVST---NGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVD 521 (580)
Q Consensus 445 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~---~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 521 (580)
.....+|+.|+|||.+.+...+. ++|||||||++|||++|+.||...... .... ....
T Consensus 165 ------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~--------~~~~ 225 (271)
T 3kmu_A 165 ------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM-----EIGM--------KVAL 225 (271)
T ss_dssp ------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH-----HHHH--------HHHH
T ss_pred ------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH-----HHHH--------HHHh
Confidence 12345889999999988765544 799999999999999999998653111 0000 0000
Q ss_pred hhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 038098 522 ANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRD 572 (580)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~ 572 (580)
. . .....+..++.++.+++.+||+.||++|||++|+++.|+++.+
T Consensus 226 ~----~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 226 E----G--LRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp S----C--CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred c----C--CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 0 0 0112234567789999999999999999999999999998754
No 105
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=8.4e-43 Score=359.13 Aligned_cols=272 Identities=18% Similarity=0.269 Sum_probs=206.0
Q ss_pred hcCCCcCceeccc--cCceEEEEEeC-CCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceee
Q 038098 291 TNGFSENNLIGRG--GFGSVYKARIQ-DGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKAL 365 (580)
Q Consensus 291 ~~~~~~~~~lg~G--~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 365 (580)
.++|++.+.||+| +||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++...+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4678999999999 99999999976 79999999997553 2334678889999999999999999999999999999
Q ss_pred EeeccCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCC
Q 038098 366 VLEYMPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLK 444 (580)
Q Consensus 366 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 444 (580)
||||+++|+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 999999999999987653 56999999999999999999999 89999999999999999999999999999865432
Q ss_pred CCC-----cccccccccCCCcCCcccccC--CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccc--
Q 038098 445 EDQ-----SLTQTQTLATIGYMAPEYGRE--GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPIS-- 515 (580)
Q Consensus 445 ~~~-----~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-- 515 (580)
... ........||+.|+|||.+.+ ..++.++||||+||++|||++|+.||............+ ....+..
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~-~~~~~~~~~ 259 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKL-NGTVPCLLD 259 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHh-cCCCCcccc
Confidence 211 111223468899999999887 578999999999999999999999997632222111111 0000000
Q ss_pred ---------------------hhhhcc---hhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 516 ---------------------VMEIVD---ANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 516 ---------------------~~~~~d---~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
..+... .............+..++.++.+|+.+||+.||++|||++|+++|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000000 000000000112234567789999999999999999999999976
No 106
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.5e-43 Score=354.41 Aligned_cols=276 Identities=24% Similarity=0.303 Sum_probs=214.7
Q ss_pred cCCCcCceeccccCceEEEEEe-----CCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeee--cCCcee
Q 038098 292 NGFSENNLIGRGGFGSVYKARI-----QDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCS--SDDFKA 364 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~ 364 (580)
++|+..+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. .....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 5688899999999999999984 368899999997665555677899999999999999999999876 456689
Q ss_pred eEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCC
Q 038098 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLK 444 (580)
Q Consensus 365 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 444 (580)
+||||+++++|.+++...+..+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 999999999999999876667999999999999999999999 89999999999999999999999999999987643
Q ss_pred CCCc-ccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchh
Q 038098 445 EDQS-LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDAN 523 (580)
Q Consensus 445 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 523 (580)
.... .......+|..|+|||.+.+..++.++||||+|+++|||++|+.||....... ...+.............+..
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 257 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF--LRMMGCERDVPALSRLLELL 257 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH--HHHCC----CCHHHHHHHHH
T ss_pred CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchh--hhhcccccccccHHHHHHHh
Confidence 3321 12334568888999999988889999999999999999999999975421110 00000000000111111111
Q ss_pred ccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038098 524 LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575 (580)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~ 575 (580)
.. ......+..++.++.+++.+||+.||++||+++|++++|+++.....
T Consensus 258 ~~---~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 258 EE---GQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp HT---TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred hc---ccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 11 11222345677889999999999999999999999999999876554
No 107
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=8.5e-43 Score=351.19 Aligned_cols=251 Identities=23% Similarity=0.346 Sum_probs=199.5
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCC-------
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDD------- 361 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------- 361 (580)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 356889999999999999999976 79999999997543 334577899999999999999999999985543
Q ss_pred --------------------------------------------------ceeeEeeccCCCChHHHhhcCC--CCCCHH
Q 038098 362 --------------------------------------------------FKALVLEYMPHGSLEKCLYSSN--YILDIF 389 (580)
Q Consensus 362 --------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~--~~~~~~ 389 (580)
..++||||+++|+|.+++.... ...++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 2789999999999999998654 346777
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCc----------ccccccccCCC
Q 038098 390 QRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS----------LTQTQTLATIG 459 (580)
Q Consensus 390 ~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~----------~~~~~~~~~~~ 459 (580)
.++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++........ .......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 89999999999999999 899999999999999999999999999999876443211 12234569999
Q ss_pred cCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCCcccccchhhhhH
Q 038098 460 YMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCV 539 (580)
Q Consensus 460 y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 539 (580)
|+|||.+.+..++.++||||+||++|||++|..|+... ..... .... . .........+
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-------~~~~~--------~~~~----~---~~~~~~~~~~ 299 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-------VRIIT--------DVRN----L---KFPLLFTQKY 299 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------HHHHH--------HHHT----T---CCCHHHHHHC
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-------HHHHH--------Hhhc----c---CCCcccccCC
Confidence 99999999999999999999999999999988774220 00000 0000 0 0111223445
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 540 SFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 540 ~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
+++.+++.+||+.||++||+++|+++|
T Consensus 300 ~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 300 PQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred hhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 677899999999999999999999875
No 108
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1e-42 Score=351.95 Aligned_cols=245 Identities=21% Similarity=0.254 Sum_probs=206.2
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc---cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY---GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
++|...+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57889999999999999999875 68999999996542 234567888999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 447 (580)
||+++|+|.+++...+ .+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~-- 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-- 194 (350)
T ss_dssp ECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCC--
Confidence 9999999999987654 5899999999999999999999 999999999999999999999999999999865332
Q ss_pred cccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCC
Q 038098 448 SLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQ 527 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 527 (580)
.....||+.|+|||.+.+..++.++||||+||++|||++|+.||.... ...... .+...
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~--------~i~~~----- 253 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ-----PIQIYE--------KIVSG----- 253 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHH--------HHHHC-----
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC-----HHHHHH--------HHHcC-----
Confidence 234569999999999999999999999999999999999999986521 111111 11111
Q ss_pred cccccchhhhhHHHHHHHHhhccCCCCCCCCC-----HHHHHHH
Q 038098 528 KDEHFTTKGQCVSFIFNLAMKCTVESPEQRIN-----AKEIVTR 566 (580)
Q Consensus 528 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~ev~~~ 566 (580)
....+..++.++.+++.+||+.||++||+ ++|+++|
T Consensus 254 ---~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 254 ---KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred ---CCCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 01122346778999999999999999998 8888875
No 109
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.2e-42 Score=347.89 Aligned_cols=273 Identities=24% Similarity=0.389 Sum_probs=213.7
Q ss_pred CCcCceeccccCceEEEEEeC-----CCCEEEEEEEecccc-chhhhHHHHHHHHhhcCCCCcceEEeeeec--CCceee
Q 038098 294 FSENNLIGRGGFGSVYKARIQ-----DGMEVAVKVFDLQYG-RAFKSFDIECDMIKRIRHRNIIKIISSCSS--DDFKAL 365 (580)
Q Consensus 294 ~~~~~~lg~G~~g~v~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~l 365 (580)
|+..+.||+|+||.||++.+. +|+.||||++..... .....+.+|++++++++||||+++++++.. ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 488899999999999998643 588899999975532 345678899999999999999999999987 457899
Q ss_pred EeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCC
Q 038098 366 VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE 445 (580)
Q Consensus 366 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 445 (580)
||||+++|+|.+++.... +++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 113 v~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 999999999999997654 899999999999999999999 899999999999999999999999999999876443
Q ss_pred CCc-ccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhc-ccchhhhcchh
Q 038098 446 DQS-LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLL-PISVMEIVDAN 523 (580)
Q Consensus 446 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~ 523 (580)
... .......+|..|+|||.+.+..++.++||||+|+++|||+||+.||............+..... .....+.++..
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 267 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc
Confidence 321 1233455788899999999889999999999999999999999998652111000000000000 00011111111
Q ss_pred ccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhh
Q 038098 524 LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLKN 577 (580)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~~~ 577 (580)
.....+..++.++.+++.+||+.||++||+++|+++.|+++.+++...
T Consensus 268 ------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 315 (318)
T 3lxp_A 268 ------ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ 315 (318)
T ss_dssp ------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred ------cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence 122334567788999999999999999999999999999999988643
No 110
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=9.2e-43 Score=354.39 Aligned_cols=253 Identities=23% Similarity=0.281 Sum_probs=196.7
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeec
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEY 369 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 369 (580)
.++|...+.||+|+||.||+|+.. +++.||||++.... .....+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 467999999999999999999876 78999999996543 2346788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCc--EEEccccCccccCCCCC
Q 038098 370 MPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMV--AHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 370 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~--~kl~Dfg~a~~~~~~~~ 447 (580)
+++|+|.+++...+ .+++..++.++.||+.||+||| +.+|+||||||+||+++.++. +||+|||+++.....
T Consensus 98 ~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~-- 171 (361)
T 3uc3_A 98 ASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-- 171 (361)
T ss_dssp CCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc--
Confidence 99999999887544 5999999999999999999999 999999999999999987765 999999999743221
Q ss_pred cccccccccCCCcCCcccccCCCCCCc-hhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccC
Q 038098 448 SLTQTQTLATIGYMAPEYGREGQVSTN-GDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLS 526 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 526 (580)
.......||+.|+|||.+.+..++.+ +||||+||++|||++|+.||....... ........ +....
T Consensus 172 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~~--------~~~~~--- 238 (361)
T 3uc3_A 172 -SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTIQR--------ILSVK--- 238 (361)
T ss_dssp ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHHHHHH--------HHTTC---
T ss_pred -CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHHHHHH--------HhcCC---
Confidence 12334569999999999988777655 899999999999999999997632211 11111111 11110
Q ss_pred CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 527 QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 527 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
........++.++.+|+.+||+.||++|||++|+++|
T Consensus 239 ---~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 239 ---YSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ---CCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ---CCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 0111222456788999999999999999999999987
No 111
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2e-42 Score=346.70 Aligned_cols=252 Identities=21% Similarity=0.299 Sum_probs=206.9
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccc------hhhhHHHHHHHHhhcCCCCcceEEeeeecCCce
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGR------AFKSFDIECDMIKRIRHRNIIKIISSCSSDDFK 363 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 363 (580)
.++|.+.+.||+|+||.||+|... +|+.||+|++...... ..+.+.+|+.++++++||||+++++++...+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 356889999999999999999865 6899999999654321 356789999999999999999999999999999
Q ss_pred eeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCC----cEEEccccCc
Q 038098 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM----VAHLSDFGMA 439 (580)
Q Consensus 364 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~----~~kl~Dfg~a 439 (580)
++||||+++++|.+++... ..+++..++.++.||+.||+||| +.+|+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 9999999999999998754 46899999999999999999999 89999999999999999888 7999999999
Q ss_pred cccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhh
Q 038098 440 KPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEI 519 (580)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (580)
....... ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||..... ...... +
T Consensus 167 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~--------i 230 (321)
T 2a2a_A 167 HEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-----QETLAN--------I 230 (321)
T ss_dssp EECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-----HHHHHH--------H
T ss_pred eecCccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH-----HHHHHH--------H
Confidence 8664322 22345689999999999988999999999999999999999999865211 111110 0
Q ss_pred cchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 520 VDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 520 ~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.. .............+..+.+++.+||+.||++|||++|+++|
T Consensus 231 ~~----~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 231 TS----VSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp HT----TCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred Hh----cccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 00000111223456788999999999999999999999985
No 112
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=5.8e-43 Score=353.21 Aligned_cols=254 Identities=22% Similarity=0.309 Sum_probs=204.7
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc---cchhhhHHHHHHHHhhc-CCCCcceEEeeeecCCceeeE
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY---GRAFKSFDIECDMIKRI-RHRNIIKIISSCSSDDFKALV 366 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 366 (580)
++|...+.||+|+||.||+|+.+ +|+.||+|++.... ......+..|..++.++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 56888999999999999999875 68899999997543 22345678899999988 899999999999999999999
Q ss_pred eeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCC
Q 038098 367 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED 446 (580)
Q Consensus 367 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 446 (580)
|||+++|+|.+++...+ .+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 89 ~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred EeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 99999999999987644 5899999999999999999999 8999999999999999999999999999998543222
Q ss_pred CcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCch---HHHHHHhhcccchhhhcchh
Q 038098 447 QSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMT---LKHWVNDLLPISVMEIVDAN 523 (580)
Q Consensus 447 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~ 523 (580)
.......||+.|+|||.+.+..++.++||||+||++|||++|+.||......... ..... ...+...
T Consensus 165 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~-------~~~i~~~- 234 (345)
T 3a8x_A 165 --DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL-------FQVILEK- 234 (345)
T ss_dssp --CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHH-------HHHHHHC-
T ss_pred --CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHH-------HHHHHcC-
Confidence 2234567999999999999999999999999999999999999999653211100 00000 0011111
Q ss_pred ccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCH------HHHHHH
Q 038098 524 LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINA------KEIVTR 566 (580)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~------~ev~~~ 566 (580)
....+...+.++.+++.+||+.||++||++ +|+++|
T Consensus 235 -------~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 235 -------QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp -------CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred -------CCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 111234567789999999999999999995 677654
No 113
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-43 Score=355.27 Aligned_cols=253 Identities=23% Similarity=0.384 Sum_probs=198.8
Q ss_pred hcCCCcCceeccccCceEEEEEeCCCCEEEEEEEecccc--chhhhHHHHHHHHhhcCC--CCcceEEeeeecCCceeeE
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYG--RAFKSFDIECDMIKRIRH--RNIIKIISSCSSDDFKALV 366 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv 366 (580)
.+.|++.+.||+|+||.||+|...+++.||||++..... ...+.+.+|++++.+++| |||+++++++...+..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 356889999999999999999988899999999975432 334678899999999986 9999999999999999999
Q ss_pred eeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCC
Q 038098 367 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED 446 (580)
Q Consensus 367 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 446 (580)
||+ .+|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+|||++ ++.+||+|||+++.+....
T Consensus 88 ~e~-~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp ECC-CSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred EeC-CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 995 5789999998654 6899999999999999999999 89999999999999997 6789999999998765443
Q ss_pred CcccccccccCCCcCCcccccC-----------CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccc
Q 038098 447 QSLTQTQTLATIGYMAPEYGRE-----------GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPIS 515 (580)
Q Consensus 447 ~~~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 515 (580)
.........||+.|+|||.+.+ ..++.++|||||||++|||++|+.||...... ...
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~--------- 229 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---ISK--------- 229 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH---HHH---------
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH---HHH---------
Confidence 3333445679999999998864 67899999999999999999999999653211 111
Q ss_pred hhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 038098 516 VMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567 (580)
Q Consensus 516 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L 567 (580)
....++... ....+...+.++.+++.+||+.||++|||++|+++|-
T Consensus 230 ~~~~~~~~~------~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 230 LHAIIDPNH------EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp HHHHHCTTS------CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred HHHHhcCCc------ccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 111122111 1112233456789999999999999999999999874
No 114
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=5.7e-43 Score=349.51 Aligned_cols=263 Identities=23% Similarity=0.414 Sum_probs=201.4
Q ss_pred HhcCCCcCceeccccCceEEEEEeC----CCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecCC--
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDD-- 361 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-- 361 (580)
..++|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++...+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 4567888899999999999999754 34579999986542 234567889999999999999999999987655
Q ss_pred ---ceeeEeeccCCCChHHHhhc-----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEE
Q 038098 362 ---FKALVLEYMPHGSLEKCLYS-----SNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHL 433 (580)
Q Consensus 362 ---~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl 433 (580)
..++||||+++|+|.+++.. ....+++..++.++.||++||.||| +.+|+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEE
Confidence 34899999999999999853 2356999999999999999999999 999999999999999999999999
Q ss_pred ccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhc
Q 038098 434 SDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLL 512 (580)
Q Consensus 434 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 512 (580)
+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |..||...... .....
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~----- 261 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--EMYDY----- 261 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHH-----
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--HHHHH-----
Confidence 99999986644433333344567889999999999999999999999999999999 88888653211 11110
Q ss_pred ccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038098 513 PISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575 (580)
Q Consensus 513 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~ 575 (580)
+... .....+..++.++.+++.+||+.||++||++.+++++|+++.+++.
T Consensus 262 ------~~~~-------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 262 ------LLHG-------HRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp ------HHTT-------CCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred ------HHcC-------CCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 0000 0112234567789999999999999999999999999999988754
No 115
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.4e-42 Score=340.25 Aligned_cols=254 Identities=24% Similarity=0.332 Sum_probs=209.5
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEee
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 368 (580)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 356889999999999999999875 78999999997543 3345778899999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCc
Q 038098 369 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS 448 (580)
Q Consensus 369 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 448 (580)
|+++++|.+++... ..+++..++.++.|++.||+||| +.+++||||||+||+++.++.+||+|||.+.........
T Consensus 86 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 86 YCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp CCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred ecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 99999999988654 45899999999999999999999 899999999999999999999999999999865433322
Q ss_pred ccccccccCCCcCCcccccCCCC-CCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCC
Q 038098 449 LTQTQTLATIGYMAPEYGREGQV-STNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQ 527 (580)
Q Consensus 449 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 527 (580)
.......|+..|+|||.+.+..+ +.++||||+|+++|||++|+.||............|....
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---------------- 225 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK---------------- 225 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTC----------------
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcc----------------
Confidence 23345568999999999987665 7899999999999999999999976433222233322210
Q ss_pred cccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 528 KDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 528 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.........+..+.+++.+||+.||++|||++|+++|
T Consensus 226 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 226 --TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp --TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --cccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 0111223456778999999999999999999999875
No 116
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.1e-42 Score=340.48 Aligned_cols=252 Identities=21% Similarity=0.355 Sum_probs=206.0
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
.++|++.+.||+|+||.||+|... +|+.||+|++.... ......+.+|++++++++||||+++++++...+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 467999999999999999999865 68999999996543 234467889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCc---EEEccccCccccCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMV---AHLSDFGMAKPLLK 444 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~---~kl~Dfg~a~~~~~ 444 (580)
||+++++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||++.....
T Consensus 85 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 9999999998887553 5899999999999999999999 899999999999999986655 99999999986533
Q ss_pred CCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhc
Q 038098 445 EDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANL 524 (580)
Q Consensus 445 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 524 (580)
.. ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||..... ...... +...
T Consensus 161 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-----~~~~~~---------~~~~- 222 (284)
T 3kk8_A 161 SE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-----HRLYAQ---------IKAG- 222 (284)
T ss_dssp SC---BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH---------HHHT-
T ss_pred Cc---cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch-----hHHHHH---------HHhc-
Confidence 22 22345689999999999999999999999999999999999999865211 111110 0000
Q ss_pred cCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 525 LSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 525 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
...........++.++.+++.+||+.||++|||++|+++|
T Consensus 223 --~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 223 --AYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp --CCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred --cccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0001111223566789999999999999999999999886
No 117
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-43 Score=361.42 Aligned_cols=260 Identities=25% Similarity=0.440 Sum_probs=200.5
Q ss_pred CCcCceeccccCceEEEEEeC--CC--CEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeee-cCCceeeEe
Q 038098 294 FSENNLIGRGGFGSVYKARIQ--DG--MEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCS-SDDFKALVL 367 (580)
Q Consensus 294 ~~~~~~lg~G~~g~v~~~~~~--~~--~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~lv~ 367 (580)
|...+.||+|+||.||+|.+. ++ ..||+|.+.... ....+.+.+|+.++++++||||+++++++. ..+..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 556789999999999999853 22 358999886432 344578899999999999999999999864 456789999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 447 (580)
||+++|+|.+++......+++..++.++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 171 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 247 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247 (373)
T ss_dssp ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred ECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccccccccccc
Confidence 999999999999887778999999999999999999999 89999999999999999999999999999986543321
Q ss_pred c--ccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhc
Q 038098 448 S--LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANL 524 (580)
Q Consensus 448 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 524 (580)
. .......+|+.|+|||.+.+..++.++|||||||++|||+| |.+||...... ....... ..
T Consensus 248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~--~~~~~~~-----------~~-- 312 (373)
T 3c1x_A 248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLL-----------QG-- 312 (373)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS--CHHHHHH-----------TT--
T ss_pred ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH--HHHHHHH-----------cC--
Confidence 1 12234457888999999999999999999999999999999 67777553211 1111111 00
Q ss_pred cCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 038098 525 LSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLK 576 (580)
Q Consensus 525 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~~ 576 (580)
.+...+..++..+.+++.+||+.||++||+++|++++|+++...+..
T Consensus 313 -----~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~ 359 (373)
T 3c1x_A 313 -----RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 359 (373)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred -----CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccc
Confidence 01122345677899999999999999999999999999999877653
No 118
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.2e-42 Score=348.46 Aligned_cols=251 Identities=21% Similarity=0.242 Sum_probs=183.4
Q ss_pred CceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcC-CCCcceEEeeeecCCceeeEeeccCCCC
Q 038098 297 NNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIR-HRNIIKIISSCSSDDFKALVLEYMPHGS 374 (580)
Q Consensus 297 ~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~g~ 374 (580)
.+.||+|+||.||+|... +|+.||||++... ....+..|+.++..+. ||||+++++++.+.+..++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999875 6899999999643 3466788999999997 9999999999999999999999999999
Q ss_pred hHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCC---cEEEccccCccccCCCCCcccc
Q 038098 375 LEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM---VAHLSDFGMAKPLLKEDQSLTQ 451 (580)
Q Consensus 375 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~---~~kl~Dfg~a~~~~~~~~~~~~ 451 (580)
|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++ .+||+|||+++...... ...
T Consensus 93 L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--~~~ 166 (325)
T 3kn6_A 93 LFERIKKK-KHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN--QPL 166 (325)
T ss_dssp HHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC--Ccc
Confidence 99999765 46999999999999999999999 89999999999999997665 89999999998653322 223
Q ss_pred cccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCCcccc
Q 038098 452 TQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEH 531 (580)
Q Consensus 452 ~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 531 (580)
....||+.|+|||.+.+..++.++||||+||++|||++|+.||........ .....+..+..........
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----------~~~~~~~~~~i~~~~~~~~ 236 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT----------CTSAVEIMKKIKKGDFSFE 236 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-----------------CCCHHHHHHHHTTTCCCCC
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc----------cccHHHHHHHHHcCCCCCC
Confidence 345689999999999999999999999999999999999999976322100 0001111111111111112
Q ss_pred cchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 532 FTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 532 ~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
...+..++.++.+|+.+||+.||++|||++|+++|
T Consensus 237 ~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 237 GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred cccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 22334567889999999999999999999998754
No 119
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=6.3e-43 Score=343.60 Aligned_cols=261 Identities=22% Similarity=0.351 Sum_probs=209.6
Q ss_pred hcCCCcCceeccccCceEEEEEeCC----CCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceee
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQD----GMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKAL 365 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 365 (580)
.++|...+.||+|+||.||+|.+.+ +..||+|++.... ....+.+.+|+.++++++||||+++++++.++ ..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEE
Confidence 4678889999999999999998542 3359999986542 23457788999999999999999999998754 5689
Q ss_pred EeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCC
Q 038098 366 VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE 445 (580)
Q Consensus 366 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 445 (580)
||||+++++|.+++...+..+++..++.++.|+++||.||| +.+++||||||+||+++.++.+||+|||++......
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 99999999999999877777999999999999999999999 899999999999999999999999999999865432
Q ss_pred CCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhc
Q 038098 446 DQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANL 524 (580)
Q Consensus 446 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 524 (580)
.. .......+|..|+|||.+.+..++.++||||||+++|||+| |+.||...... ....... ...
T Consensus 167 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~--~~~~~~~------------~~~ 231 (281)
T 3cc6_A 167 DY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK--DVIGVLE------------KGD 231 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG--GHHHHHH------------HTC
T ss_pred cc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH--HHHHHHh------------cCC
Confidence 21 22334457888999999988899999999999999999998 99998653211 1111110 000
Q ss_pred cCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 038098 525 LSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLK 576 (580)
Q Consensus 525 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~~ 576 (580)
....+..++..+.+++.+||+.||++||++.|++++|+++.+....
T Consensus 232 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 277 (281)
T 3cc6_A 232 ------RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKD 277 (281)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred ------CCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhhh
Confidence 1112234667899999999999999999999999999999876543
No 120
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.1e-42 Score=349.36 Aligned_cols=249 Identities=24% Similarity=0.345 Sum_probs=196.5
Q ss_pred hcCCCcCceeccccCceEEEEEe----CCCCEEEEEEEeccc----cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCc
Q 038098 291 TNGFSENNLIGRGGFGSVYKARI----QDGMEVAVKVFDLQY----GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDF 362 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 362 (580)
.++|++.+.||+|+||.||+|+. .+|+.||+|++.... ......+.+|++++++++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 36789999999999999999986 478999999996542 2334567889999999999999999999999999
Q ss_pred eeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCcccc
Q 038098 363 KALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL 442 (580)
Q Consensus 363 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~ 442 (580)
.++||||+++|+|.+++...+ .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 999999999999999987644 5899999999999999999999 899999999999999999999999999999754
Q ss_pred CCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcch
Q 038098 443 LKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDA 522 (580)
Q Consensus 443 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 522 (580)
..... ......||+.|+|||.+.+..++.++||||+||++|||++|+.||..... ..... .+...
T Consensus 172 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~--------~i~~~ 236 (327)
T 3a62_A 172 IHDGT--VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR-----KKTID--------KILKC 236 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHH--------HHHHT
T ss_pred ccCCc--cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH-----HHHHH--------HHHhC
Confidence 32221 23345699999999999988999999999999999999999999975311 11111 11111
Q ss_pred hccCCcccccchhhhhHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 038098 523 NLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRI-----NAKEIVTR 566 (580)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~ev~~~ 566 (580)
....+...+.++.+++.+||+.||++|| ++.|+++|
T Consensus 237 --------~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 237 --------KLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp --------CCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred --------CCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 0112234567889999999999999999 78888875
No 121
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.5e-43 Score=369.44 Aligned_cols=256 Identities=24% Similarity=0.411 Sum_probs=206.4
Q ss_pred hcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeecc
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEYM 370 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 370 (580)
.++|...+.||+|+||.||+|.+.++..||||++.... ...+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~ 260 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 260 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence 45688889999999999999999878889999987543 234678999999999999999999999876 6789999999
Q ss_pred CCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCcc
Q 038098 371 PHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSL 449 (580)
Q Consensus 371 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 449 (580)
++|+|.+++... +..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-~~ 336 (452)
T 1fmk_A 261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YT 336 (452)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCc-ee
Confidence 999999999753 345899999999999999999999 8999999999999999999999999999998664322 12
Q ss_pred cccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhccCCc
Q 038098 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQK 528 (580)
Q Consensus 450 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 528 (580)
......+|..|+|||.+..+.++.++|||||||++|||+| |+.||..... .+.. ..+...
T Consensus 337 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~-----~~~~---------~~i~~~----- 397 (452)
T 1fmk_A 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-----REVL---------DQVERG----- 397 (452)
T ss_dssp ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-----HHHH---------HHHHTT-----
T ss_pred cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH-----HHHH---------HHHHcC-----
Confidence 2234457788999999998999999999999999999999 9999865311 1110 011110
Q ss_pred ccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 038098 529 DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRD 572 (580)
Q Consensus 529 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~ 572 (580)
.+...+..++..+.+++.+||+.||++|||++++++.|+++..
T Consensus 398 -~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 398 -YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp -CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred -CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence 1122345677889999999999999999999999999988754
No 122
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=8.9e-43 Score=352.37 Aligned_cols=250 Identities=20% Similarity=0.264 Sum_probs=205.8
Q ss_pred HhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc---cchhhhHHHHHHHHhhc-CCCCcceEEeeeecCCcee
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY---GRAFKSFDIECDMIKRI-RHRNIIKIISSCSSDDFKA 364 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 364 (580)
..++|...+.||+|+||.||+|+.+ +|+.||+|++.... ......+..|..++..+ +||||+++++++.+.+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3467999999999999999999876 58899999997542 23456678899999988 7999999999999999999
Q ss_pred eEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCC
Q 038098 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLK 444 (580)
Q Consensus 365 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 444 (580)
+||||+++|+|.+++...+ .+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 98 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 9999999999999987644 5899999999999999999999 89999999999999999999999999999985422
Q ss_pred CCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhc
Q 038098 445 EDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANL 524 (580)
Q Consensus 445 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 524 (580)
.. .......||+.|+|||.+.+..++.++||||+||++|||++|+.||..... ..... .+...
T Consensus 174 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~~~~--------~i~~~-- 236 (353)
T 2i0e_A 174 DG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DELFQ--------SIMEH-- 236 (353)
T ss_dssp TT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH--------HHHHC--
T ss_pred CC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH-----HHHHH--------HHHhC--
Confidence 22 223456799999999999999999999999999999999999999865211 11111 11111
Q ss_pred cCCcccccchhhhhHHHHHHHHhhccCCCCCCCCC-----HHHHHHH
Q 038098 525 LSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRIN-----AKEIVTR 566 (580)
Q Consensus 525 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~ev~~~ 566 (580)
....+...+.++.+|+.+||+.||++||+ ++|+++|
T Consensus 237 ------~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 237 ------NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp ------CCCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred ------CCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 11122356778999999999999999995 5777765
No 123
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.2e-43 Score=352.14 Aligned_cols=255 Identities=22% Similarity=0.355 Sum_probs=196.0
Q ss_pred hcCCCcCceeccccCceEEEEEe-CCCCEEEEEEEecccc---chhhhHHHHHHHHhhcCCCCcceEEeeeecCCce---
Q 038098 291 TNGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFDLQYG---RAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFK--- 363 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~--- 363 (580)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .....+.+|++++++++||||+++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46799999999999999999986 5789999999975432 2345788999999999999999999998765543
Q ss_pred -eeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCcccc
Q 038098 364 -ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL 442 (580)
Q Consensus 364 -~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~ 442 (580)
++||||+++|+|.+++...+ .+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.+
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 99999999999999987654 5899999999999999999999 899999999999999999999999999999866
Q ss_pred CCCCCc-ccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcc
Q 038098 443 LKEDQS-LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVD 521 (580)
Q Consensus 443 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 521 (580)
...... .......||+.|+|||.+.+..++.++|||||||++|||+||+.||........ ......
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-~~~~~~------------ 233 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-AYQHVR------------ 233 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHH------------
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHhc------------
Confidence 443222 223345689999999999999999999999999999999999999865311100 000000
Q ss_pred hhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 522 ANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
............++.++.+++.+||+.||++||++.+++.+
T Consensus 234 ----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~ 274 (311)
T 3ork_A 234 ----EDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274 (311)
T ss_dssp ----CCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred ----CCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHH
Confidence 01111111223467789999999999999999977666543
No 124
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=7e-43 Score=344.57 Aligned_cols=261 Identities=23% Similarity=0.392 Sum_probs=216.8
Q ss_pred HhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEee
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 368 (580)
..++|+..+.||+|+||.||+|.+. +++.||+|++... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 3467888999999999999999876 5889999998644 3345778899999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCC
Q 038098 369 YMPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 369 ~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 447 (580)
|+++++|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 165 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT- 165 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS-
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCc-
Confidence 999999999997643 56899999999999999999999 8999999999999999999999999999998664332
Q ss_pred cccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhccC
Q 038098 448 SLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLS 526 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 526 (580)
........+|+.|+|||.+.+..++.++||||+|+++|||++ |..||...... ... +.+....
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~------------~~~~~~~-- 229 (288)
T 3kfa_A 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVY------------ELLEKDY-- 229 (288)
T ss_dssp SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHH------------HHHHTTC--
T ss_pred cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHH------------HHHhccC--
Confidence 223344557888999999998899999999999999999999 99998653211 111 1111110
Q ss_pred CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038098 527 QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575 (580)
Q Consensus 527 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~ 575 (580)
....+..++.++.+++.+||+.||++||+++|+++.|+++..+..
T Consensus 230 ----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~ 274 (288)
T 3kfa_A 230 ----RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274 (288)
T ss_dssp ----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ----CCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 112234567889999999999999999999999999999887643
No 125
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=8.2e-43 Score=342.40 Aligned_cols=260 Identities=22% Similarity=0.384 Sum_probs=211.9
Q ss_pred hcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeecc
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEYM 370 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 370 (580)
.++|.+.+.||+|+||.||+|...+++.||+|++.... ...+.+.+|++++++++||||+++++++.. +..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecC
Confidence 35688899999999999999998888899999986543 345778999999999999999999999874 5589999999
Q ss_pred CCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCcc
Q 038098 371 PHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSL 449 (580)
Q Consensus 371 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 449 (580)
++++|.+++.... ..+++..++.++.|++.||+||| +.+++||||||+||+++.++.+||+|||++....... ..
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 165 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YT 165 (279)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC-EE
T ss_pred CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc-cc
Confidence 9999999987543 36899999999999999999999 8999999999999999999999999999998764322 12
Q ss_pred cccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhccCCc
Q 038098 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQK 528 (580)
Q Consensus 450 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 528 (580)
......++..|+|||.+.++.++.++||||||+++|||++ |+.||..... ..... .+....
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~~~~~---------~~~~~~---- 227 (279)
T 1qpc_A 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN-----PEVIQ---------NLERGY---- 227 (279)
T ss_dssp CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH-----HHHHH---------HHHTTC----
T ss_pred cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH-----HHHHH---------HHhccc----
Confidence 2234457788999999988889999999999999999999 8999865211 11111 000000
Q ss_pred ccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 038098 529 DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLK 576 (580)
Q Consensus 529 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~~ 576 (580)
....+..++.++.+++.+||+.||++||++.++++.|+++......
T Consensus 228 --~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 273 (279)
T 1qpc_A 228 --RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG 273 (279)
T ss_dssp --CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred --CCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccC
Confidence 1112235667899999999999999999999999999998876543
No 126
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=6.4e-42 Score=346.38 Aligned_cols=277 Identities=23% Similarity=0.355 Sum_probs=215.5
Q ss_pred CHHHHHHHhcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhh--cCCCCcceEEeeeecC
Q 038098 283 TYLEIFQATNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKR--IRHRNIIKIISSCSSD 360 (580)
Q Consensus 283 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~ 360 (580)
+...-....++|.+.+.||+|+||.||+|+.. |+.||||++... ....+..|++++.. ++||||+++++++...
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 33334455678999999999999999999985 899999998643 34567788888887 7899999999999876
Q ss_pred C----ceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeEEecCCCCCEEeCCCCcE
Q 038098 361 D----FKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY-----SVPIIHCDLKPSNVLLDDNMVA 431 (580)
Q Consensus 361 ~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~-----~~~i~H~dlk~~Nill~~~~~~ 431 (580)
. ..++||||+++|+|.+++... .+++..++.++.|++.||+|||... +.+|+||||||+||+++.++.+
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~ 186 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 186 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCE
T ss_pred CCccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCE
Confidence 5 789999999999999999764 4899999999999999999999321 4689999999999999999999
Q ss_pred EEccccCccccCCCCCcc--cccccccCCCcCCcccccCC------CCCCchhhHhHHHHHHHHHhC----------CCC
Q 038098 432 HLSDFGMAKPLLKEDQSL--TQTQTLATIGYMAPEYGREG------QVSTNGDVYSFGIMLMETFTR----------KKP 493 (580)
Q Consensus 432 kl~Dfg~a~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Dvws~Gvil~elltg----------~~p 493 (580)
||+|||++.......... ......||+.|+|||.+.+. .++.++|||||||++|||+|| ..|
T Consensus 187 kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p 266 (342)
T 1b6c_B 187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266 (342)
T ss_dssp EECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccC
Confidence 999999998664333211 23445699999999998765 234789999999999999999 667
Q ss_pred CCccccCCchHHHHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 038098 494 TDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDS 573 (580)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~ 573 (580)
|............+....... ....... .......++..+.+|+.+||+.||++||+++||+++|+++.++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 267 YYDLVPSDPSVEEMRKVVCEQ--------KLRPNIP-NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp TTTTSCSSCCHHHHHHHHTTS--------CCCCCCC-GGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ccccCcCcccHHHHHHHHHHH--------HhCCCCc-ccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 765433333333333221111 1111110 1112245678899999999999999999999999999999876
Q ss_pred H
Q 038098 574 L 574 (580)
Q Consensus 574 ~ 574 (580)
.
T Consensus 338 ~ 338 (342)
T 1b6c_B 338 E 338 (342)
T ss_dssp T
T ss_pred h
Confidence 4
No 127
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-42 Score=343.75 Aligned_cols=261 Identities=23% Similarity=0.404 Sum_probs=208.9
Q ss_pred CCcCceeccccCceEEEEEeC-CC---CEEEEEEEecccc-chhhhHHHHHHHHhhcCCCCcceEEeeeecCCce-eeEe
Q 038098 294 FSENNLIGRGGFGSVYKARIQ-DG---MEVAVKVFDLQYG-RAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFK-ALVL 367 (580)
Q Consensus 294 ~~~~~~lg~G~~g~v~~~~~~-~~---~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~-~lv~ 367 (580)
|...+.||+|+||.||+|.+. ++ ..||+|++..... ...+.+.+|+.++++++||||+++++++.+.+.. ++||
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 555688999999999999853 23 3699999864332 3456788999999999999999999999766655 8999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 447 (580)
||+.+|+|.+++......+++..++.++.|++.||+||| +.+++||||||+||+++.++.+||+|||+++.......
T Consensus 103 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 179 (298)
T 3pls_A 103 PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179 (298)
T ss_dssp CCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred ecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence 999999999999887778999999999999999999999 89999999999999999999999999999986543221
Q ss_pred --cccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhcc
Q 038098 448 --SLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLL 525 (580)
Q Consensus 448 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 525 (580)
........+|..|+|||.+.+..++.++||||+|+++|||++|+.|+..... ......... ...
T Consensus 180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~-~~~~~~~~~------------~~~- 245 (298)
T 3pls_A 180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID-PFDLTHFLA------------QGR- 245 (298)
T ss_dssp GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-GGGHHHHHH------------TTC-
T ss_pred cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC-HHHHHHHhh------------cCC-
Confidence 1223345678899999999999999999999999999999996665432111 111111111 100
Q ss_pred CCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 038098 526 SQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLK 576 (580)
Q Consensus 526 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~~ 576 (580)
....+..++..+.+++.+||+.||++|||++++++.|+++..++..
T Consensus 246 -----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~ 291 (298)
T 3pls_A 246 -----RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291 (298)
T ss_dssp -----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred -----CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 1122334567899999999999999999999999999999887643
No 128
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-42 Score=349.84 Aligned_cols=261 Identities=26% Similarity=0.446 Sum_probs=206.1
Q ss_pred cCCCcCceeccccCceEEEEEeCC-----CCEEEEEEEecccc-chhhhHHHHHHHHhhcCCCCcceEEeeeecCCceee
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQD-----GMEVAVKVFDLQYG-RAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKAL 365 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 365 (580)
++|...+.||+|+||.||+|.... +..||||++..... .....+.+|++++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 456677899999999999998642 23599999975432 334578899999999999999999999999999999
Q ss_pred EeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCC
Q 038098 366 VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE 445 (580)
Q Consensus 366 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 445 (580)
||||+++|+|.+++......+++..++.++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999999999887778999999999999999999999 899999999999999999999999999999866433
Q ss_pred CC-cccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchh
Q 038098 446 DQ-SLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDAN 523 (580)
Q Consensus 446 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 523 (580)
.. ........+|..|+|||.+.+..++.++|||||||++|||++ |+.||..... .... ..+...
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-----~~~~---------~~~~~~ 266 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-----HEVM---------KAINDG 266 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHH---------HHHHTT
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH-----HHHH---------HHHHCC
Confidence 21 112223346788999999998899999999999999999999 9999865211 0100 011000
Q ss_pred ccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038098 524 LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575 (580)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~ 575 (580)
.+...+..++.++.+++.+||+.||++||++.|++++|+++.+...
T Consensus 267 ------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 267 ------FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp ------CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred ------CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 0112234567789999999999999999999999999999876543
No 129
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.8e-42 Score=341.64 Aligned_cols=266 Identities=20% Similarity=0.217 Sum_probs=210.5
Q ss_pred HhcCCCcCceeccccCceEEEEEe-CCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeee-ecCCceeeEe
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSC-SSDDFKALVL 367 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~lv~ 367 (580)
..++|...+.||+|+||.||+|.. .+++.||||++.... ....+..|++++++++|++++..++.+ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999999986 578999999875442 335688899999999988877776655 6677889999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEe---CCCCcEEEccccCccccCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLLK 444 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill---~~~~~~kl~Dfg~a~~~~~ 444 (580)
||+ +++|.+++......+++..++.++.||+.||.||| +.+|+||||||+||++ +.++.+||+|||+++....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 999 89999999877777999999999999999999999 9999999999999999 7899999999999987644
Q ss_pred CCCc-----ccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCC--chHHHHHHhhcccchh
Q 038098 445 EDQS-----LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGD--MTLKHWVNDLLPISVM 517 (580)
Q Consensus 445 ~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~ 517 (580)
.... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ..........
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~------ 234 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK------ 234 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH------
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccc------
Confidence 3221 12235578999999999999999999999999999999999999997642221 1111111110
Q ss_pred hhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 038098 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLK 576 (580)
Q Consensus 518 ~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~~ 576 (580)
.... .......++.++.+++.+||+.||++||+++++++.|+++..+...
T Consensus 235 ------~~~~---~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~ 284 (296)
T 4hgt_A 235 ------MSTP---IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp ------HHSC---HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTC
T ss_pred ------ccch---hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 0000 0011134567899999999999999999999999999999887653
No 130
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.5e-42 Score=344.00 Aligned_cols=261 Identities=25% Similarity=0.425 Sum_probs=207.3
Q ss_pred cCCCcCceeccccCceEEEEEeCC----CCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeee-ecCCceee
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQD----GMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSC-SSDDFKAL 365 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~l 365 (580)
..|...+.||+|+||.||+|...+ +..||+|.+.... ....+.+.+|+.++++++||||+++++++ ..++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 457788999999999999998542 2358999886432 23456788999999999999999999985 45667899
Q ss_pred EeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCC
Q 038098 366 VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE 445 (580)
Q Consensus 366 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 445 (580)
||||+++|+|.+++......+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999999999887778999999999999999999999 899999999999999999999999999999866433
Q ss_pred CC--cccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcch
Q 038098 446 DQ--SLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDA 522 (580)
Q Consensus 446 ~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 522 (580)
.. ........+|+.|+|||.+.+..++.++||||+|+++|||++ |.+||...... ....... ..
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~--~~~~~~~-----------~~ 248 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLL-----------QG 248 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT--THHHHHH-----------TT
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH--HHHHHHh-----------cC
Confidence 21 122334567889999999998999999999999999999999 55555442111 1111110 00
Q ss_pred hccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038098 523 NLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575 (580)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~ 575 (580)
.....+..++..+.+++.+||+.||++||+++|+++.|+++.+++.
T Consensus 249 -------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 249 -------RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp -------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred -------CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 0111223456789999999999999999999999999999987654
No 131
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3.1e-42 Score=343.36 Aligned_cols=269 Identities=25% Similarity=0.287 Sum_probs=202.3
Q ss_pred HhcCCCcCceeccccCceEEEEEe-CCCCEEEEEEEecccc-----chhhhHHHHHHHHhhcC---CCCcceEEeeeecC
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFDLQYG-----RAFKSFDIECDMIKRIR---HRNIIKIISSCSSD 360 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~ 360 (580)
..++|++.+.||+|+||.||+|+. .+|+.||||++..... .....+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 357899999999999999999986 4789999999864321 12346677888777765 99999999999765
Q ss_pred C-----ceeeEeeccCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEc
Q 038098 361 D-----FKALVLEYMPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLS 434 (580)
Q Consensus 361 ~-----~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~ 434 (580)
. ..++||||+. |+|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEe
Confidence 5 4789999997 59999987665 34899999999999999999999 8999999999999999999999999
Q ss_pred cccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhccc
Q 038098 435 DFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPI 514 (580)
Q Consensus 435 Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 514 (580)
|||+++...... ......||+.|+|||.+.+..++.++||||+||++|||++|+.||...... .............
T Consensus 163 Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~ 238 (308)
T 3g33_A 163 DFGLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLP 238 (308)
T ss_dssp SCSCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH-HHHHHHHHHHCCC
T ss_pred eCccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCC
Confidence 999998653222 234557899999999999999999999999999999999999999753211 1111111111000
Q ss_pred c---hhhhc--chhccCC--cccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 515 S---VMEIV--DANLLSQ--KDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 515 ~---~~~~~--d~~~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
. ..... ....... ..........++.++.+|+.+||+.||++|||++|+++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 0 00000 0000000 000011223567889999999999999999999999976
No 132
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=4.1e-42 Score=342.83 Aligned_cols=262 Identities=24% Similarity=0.346 Sum_probs=202.0
Q ss_pred hcCCCcCceeccccCceEEEEEe-CCCCEEEEEEEeccc---cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeE
Q 038098 291 TNGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFDLQY---GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALV 366 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 366 (580)
.++|.+.+.||+|+||.||+|.. .+|+.||+|++.... ......+.+|++++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 35688999999999999999986 478999999986432 23456788999999999999999999999999999999
Q ss_pred eeccCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccC
Q 038098 367 LEYMPHGSLEKCLYS---SNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 443 (580)
Q Consensus 367 ~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 443 (580)
|||+++|+|.+++.. ....+++..++.++.||+.||.||| +.+++||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999998864 3456899999999999999999999 8999999999999999999999999999998653
Q ss_pred CCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchh
Q 038098 444 KEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDAN 523 (580)
Q Consensus 444 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 523 (580)
.... ......++..|+|||.+.+..++.++||||||+++|||++|+.||...... ...+... +...
T Consensus 188 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~---------~~~~ 253 (310)
T 2wqm_A 188 SKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKK---------IEQC 253 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC---HHHHHHH---------HHTT
T ss_pred CCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh---HHHHHHH---------hhcc
Confidence 3221 223456899999999999989999999999999999999999998653211 1111111 0000
Q ss_pred ccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 038098 524 LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574 (580)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~ 574 (580)
... ......++.++.+++.+||+.||++||++++++++|+++....
T Consensus 254 ~~~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 254 DYP-----PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp CSC-----CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCC-----CCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 000 0111345678999999999999999999999999999998764
No 133
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.4e-42 Score=347.37 Aligned_cols=260 Identities=23% Similarity=0.290 Sum_probs=207.1
Q ss_pred hcCCCcCceeccccCceEEEEEe-CCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeee----cCCceee
Q 038098 291 TNGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCS----SDDFKAL 365 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~----~~~~~~l 365 (580)
.++|...+.||+|+||.||+|.. .+|+.||||++..........+.+|++++++++||||+++++++. .....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 36789999999999999999986 578999999987655556678899999999999999999999986 3447889
Q ss_pred EeeccCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCcccc
Q 038098 366 VLEYMPHGSLEKCLYS---SNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL 442 (580)
Q Consensus 366 v~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~ 442 (580)
||||+++|+|.+++.. .+..+++..++.++.||++||+||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999999876 3567999999999999999999999 899999999999999999999999999998755
Q ss_pred CCCCCcc-------cccccccCCCcCCcccccCCC---CCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhc
Q 038098 443 LKEDQSL-------TQTQTLATIGYMAPEYGREGQ---VSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLL 512 (580)
Q Consensus 443 ~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~---~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 512 (580)
....... ......||+.|+|||.+.... ++.++||||||+++|||++|+.||+..............
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~--- 261 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ--- 261 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHH---
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhh---
Confidence 3211110 112345799999999987543 689999999999999999999998642221111111111
Q ss_pred ccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 038098 513 PISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIR 571 (580)
Q Consensus 513 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~ 571 (580)
.. ........++.++.+++.+||+.||++||+++|++++|+++.
T Consensus 262 ---------~~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 262 ---------NQ------LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp ---------CC--------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred ---------cc------CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 00 011122345678999999999999999999999999998864
No 134
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.6e-42 Score=363.10 Aligned_cols=247 Identities=26% Similarity=0.359 Sum_probs=206.2
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc---cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY---GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
++|.+.+.||+|+||.||+|... +|+.||||++.... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 57889999999999999999875 79999999996542 233467889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 447 (580)
||+++|+|.+++... ..+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 96 E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~- 170 (476)
T 2y94_A 96 EYVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE- 170 (476)
T ss_dssp ECCSSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC-
T ss_pred eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccccc-
Confidence 999999999998754 45999999999999999999999 9999999999999999999999999999998664322
Q ss_pred cccccccccCCCcCCcccccCCCC-CCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccC
Q 038098 448 SLTQTQTLATIGYMAPEYGREGQV-STNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLS 526 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 526 (580)
......||+.|+|||.+.+..+ +.++||||+||++|||++|+.||+.... ..... .+.+.
T Consensus 171 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~-----~~~~~--------~i~~~---- 231 (476)
T 2y94_A 171 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV-----PTLFK--------KICDG---- 231 (476)
T ss_dssp --CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS-----HHHHH--------HHHTT----
T ss_pred --cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH-----HHHHH--------HHhcC----
Confidence 2334579999999999987765 6899999999999999999999975211 11111 11111
Q ss_pred CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 527 QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 527 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
....+..++.++.+|+.+||+.||++|||++|+++|
T Consensus 232 ----~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 232 ----IFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp ----CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ----CcCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 111223456778999999999999999999999986
No 135
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.7e-42 Score=346.50 Aligned_cols=268 Identities=22% Similarity=0.276 Sum_probs=201.2
Q ss_pred cCCCcC-ceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhc-CCCCcceEEeeeecCCceeeEee
Q 038098 292 NGFSEN-NLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRI-RHRNIIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 292 ~~~~~~-~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 368 (580)
+.|.+. +.||+|+||.||+|... +++.||||++..........+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 467774 78999999999999854 7899999999766555667889999999985 79999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCc---EEEccccCccccCCC
Q 038098 369 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMV---AHLSDFGMAKPLLKE 445 (580)
Q Consensus 369 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~---~kl~Dfg~a~~~~~~ 445 (580)
|+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++. +||+|||++......
T Consensus 92 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred cCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 999999999987654 5899999999999999999999 899999999999999998776 999999999865322
Q ss_pred CC-----cccccccccCCCcCCcccccC-----CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccc
Q 038098 446 DQ-----SLTQTQTLATIGYMAPEYGRE-----GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPIS 515 (580)
Q Consensus 446 ~~-----~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 515 (580)
.. ........||+.|+|||.+.. ..++.++||||+||++|||++|+.||......+.. |........
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~~ 244 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCG---WDRGEACPA 244 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSC---C----CCHH
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccc---ccccccchh
Confidence 21 111234459999999998865 56889999999999999999999999764322110 110000000
Q ss_pred -hhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 516 -VMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 516 -~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
......................++.++.+|+.+||+.||++|||++|+++|
T Consensus 245 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 245 CQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 000111100011100111123467789999999999999999999999986
No 136
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.1e-42 Score=357.31 Aligned_cols=251 Identities=23% Similarity=0.376 Sum_probs=198.9
Q ss_pred cCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccc--cchhhhHHHHHHHHhhcC--CCCcceEEeeeecCCceeeEe
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIR--HRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv~ 367 (580)
..|.+.+.||+|+||.||+|...+++.||||++.... ......+.+|++++++++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4488999999999999999998889999999996543 234577889999999996 599999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 447 (580)
| +.+++|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+|||++ ++.+||+|||+++.+.....
T Consensus 136 E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp E-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred e-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 9 56789999988755 6899999999999999999999 99999999999999995 58999999999987644333
Q ss_pred cccccccccCCCcCCcccccC-----------CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccch
Q 038098 448 SLTQTQTLATIGYMAPEYGRE-----------GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISV 516 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 516 (580)
........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... . .. +
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~---~-~~--------~ 277 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---I-SK--------L 277 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH---H-HH--------H
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH---H-HH--------H
Confidence 333445679999999998864 46889999999999999999999999653111 0 10 1
Q ss_pred hhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 517 MEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 517 ~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
..+++.... ...+...+.++.+|+.+||+.||++||+++|+++|
T Consensus 278 ~~~~~~~~~------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 278 HAIIDPNHE------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHHHCTTSC------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhCcccc------CCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 112221111 11122335678999999999999999999999976
No 137
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=7.9e-43 Score=351.82 Aligned_cols=252 Identities=23% Similarity=0.318 Sum_probs=202.2
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhc-CCCCcceEEeeeecCCceeeEee
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRI-RHRNIIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 368 (580)
.++|...+.||+|+||.||+|..+ +|+.||||++..... ....|++++.++ +||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 467999999999999999999865 689999999975432 345688888888 79999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCC----CcEEEccccCccccCC
Q 038098 369 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN----MVAHLSDFGMAKPLLK 444 (580)
Q Consensus 369 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~----~~~kl~Dfg~a~~~~~ 444 (580)
|+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||++..+ +.+||+|||+++....
T Consensus 97 ~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~ 172 (342)
T 2qr7_A 97 LMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172 (342)
T ss_dssp CCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred CCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence 999999999887654 5999999999999999999999 8999999999999998533 3599999999986643
Q ss_pred CCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhc
Q 038098 445 EDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANL 524 (580)
Q Consensus 445 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 524 (580)
... ......||+.|+|||.+.+..++.++||||+||++|||++|+.||..... ......... +.
T Consensus 173 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~~~~---------i~--- 236 (342)
T 2qr7_A 173 ENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD--DTPEEILAR---------IG--- 236 (342)
T ss_dssp TTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT--SCHHHHHHH---------HH---
T ss_pred CCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc--CCHHHHHHH---------Hc---
Confidence 322 23345789999999999887889999999999999999999999975211 111111111 00
Q ss_pred cCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 525 LSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 525 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
..........+..++.++.+|+.+||..||++||+++|+++|
T Consensus 237 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 237 SGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp HCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred cCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 011111111234567889999999999999999999999886
No 138
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.3e-42 Score=340.90 Aligned_cols=248 Identities=25% Similarity=0.361 Sum_probs=202.9
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc---cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeE
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY---GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALV 366 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 366 (580)
.++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467889999999999999999865 57899999986432 22346788899999999999999999999999999999
Q ss_pred eeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCC
Q 038098 367 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED 446 (580)
Q Consensus 367 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 446 (580)
|||+++|+|.+++.... .+++..++.++.||+.|++||| +.+|+||||||+||+++.++.++|+|||++......
T Consensus 88 ~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~- 162 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS- 162 (279)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCcc-
Confidence 99999999999887654 5899999999999999999999 999999999999999999999999999998644222
Q ss_pred CcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccC
Q 038098 447 QSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLS 526 (580)
Q Consensus 447 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 526 (580)
......|++.|+|||.+.+..++.++||||+|+++|||++|+.||..... ...... + ...
T Consensus 163 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~--------~-~~~--- 222 (279)
T 3fdn_A 163 ---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-----QETYKR--------I-SRV--- 222 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHH--------H-HHT---
T ss_pred ---cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH-----HHHHHH--------H-HhC---
Confidence 22345689999999999998999999999999999999999999865211 111000 0 000
Q ss_pred CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 038098 527 QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567 (580)
Q Consensus 527 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L 567 (580)
....+..++..+.+++.+||+.||++||+++|+++|-
T Consensus 223 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 223 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp ----CCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred ----CCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 1112234567789999999999999999999999873
No 139
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.5e-43 Score=350.21 Aligned_cols=268 Identities=21% Similarity=0.277 Sum_probs=200.0
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc-chhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeec
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG-RAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEY 369 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 369 (580)
++|...+.||+|+||.||+|... +++.||+|++..... .....+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 56888999999999999999875 789999999864432 2223455799999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCcc
Q 038098 370 MPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSL 449 (580)
Q Consensus 370 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 449 (580)
++ |+|.+++...+..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++...... .
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~ 155 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--K 155 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCc--c
Confidence 97 5999999887778999999999999999999999 8999999999999999999999999999998553222 2
Q ss_pred cccccccCCCcCCcccccC-CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhc---ccchhhhcchhc-
Q 038098 450 TQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLL---PISVMEIVDANL- 524 (580)
Q Consensus 450 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~- 524 (580)
......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||......+ .......... +...........
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~ 234 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFRILGTPTEETWPGILSNEEF 234 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGCHHH
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHhchhhhcchhh
Confidence 2334568999999998876 568999999999999999999999997632111 1111111000 000111111000
Q ss_pred ----cC--CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 525 ----LS--QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 525 ----~~--~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.. ...........++.++.+|+.+||+.||++|||++|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00 0001112233567789999999999999999999999875
No 140
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.3e-41 Score=336.73 Aligned_cols=264 Identities=20% Similarity=0.223 Sum_probs=212.5
Q ss_pred hcCCCcCceeccccCceEEEEEe-CCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeee-ecCCceeeEee
Q 038098 291 TNGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSC-SSDDFKALVLE 368 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e 368 (580)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ....+..|+++++.++|++++..+.++ ...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 46799999999999999999986 578999999986543 335688999999999998877666655 56677899999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEe---CCCCcEEEccccCccccCCC
Q 038098 369 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLLKE 445 (580)
Q Consensus 369 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill---~~~~~~kl~Dfg~a~~~~~~ 445 (580)
|+ +++|.+++...+..+++..++.++.||+.||+||| +.+|+||||||+||++ +.++.+||+|||+++.....
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99 89999999877778999999999999999999999 8999999999999999 48899999999999876443
Q ss_pred CCcc-----cccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCC--chHHHHHHhhcccchhh
Q 038098 446 DQSL-----TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGD--MTLKHWVNDLLPISVME 518 (580)
Q Consensus 446 ~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~ 518 (580)
.... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ..........
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~------- 234 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK------- 234 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH-------
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccc-------
Confidence 2211 1245579999999999999999999999999999999999999997642211 1111111110
Q ss_pred hcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038098 519 IVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575 (580)
Q Consensus 519 ~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~ 575 (580)
.... .......++.++.+++.+||+.||++||+++++++.|+++..+..
T Consensus 235 -----~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 235 -----MSTP---IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp -----HHSC---HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred -----cCCc---hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 0000 001123456789999999999999999999999999999987654
No 141
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.4e-42 Score=349.50 Aligned_cols=243 Identities=26% Similarity=0.335 Sum_probs=204.1
Q ss_pred HhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc--------chhhhHHHHHHHHhhcCCCCcceEEeeeecC
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG--------RAFKSFDIECDMIKRIRHRNIIKIISSCSSD 360 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 360 (580)
..++|...+.||+|+||.||+|... +++.||||++..... .....+..|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 3467999999999999999999854 689999999975421 1335677899999999999999999999999
Q ss_pred CceeeEeeccCCC-ChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCc
Q 038098 361 DFKALVLEYMPHG-SLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMA 439 (580)
Q Consensus 361 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a 439 (580)
+..++||||+.+| +|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 9999999999777 9999887654 5999999999999999999999 899999999999999999999999999999
Q ss_pred cccCCCCCcccccccccCCCcCCcccccCCCC-CCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhh
Q 038098 440 KPLLKEDQSLTQTQTLATIGYMAPEYGREGQV-STNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVME 518 (580)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (580)
+...... ......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||.... +
T Consensus 178 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-------------------~ 235 (335)
T 3dls_A 178 AYLERGK---LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELE-------------------E 235 (335)
T ss_dssp EECCTTC---CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGG-------------------G
T ss_pred eECCCCC---ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHH-------------------H
Confidence 8664332 2234569999999999988776 789999999999999999999986421 0
Q ss_pred hcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 519 IVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 519 ~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.... ....+..++.++.+++.+||+.||++||+++|++++
T Consensus 236 ~~~~--------~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 236 TVEA--------AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp GTTT--------CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred HHhh--------ccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1110 011122356779999999999999999999999987
No 142
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.4e-42 Score=340.01 Aligned_cols=246 Identities=24% Similarity=0.360 Sum_probs=182.7
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc---cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY---GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
++|++.+.||+|+||.||+|... +|+.||+|++.... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 57999999999999999999854 78999999986542 233567889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 447 (580)
||+ +++|.+++...+ .+++..++.++.|++.|+.||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 93 e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 166 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN- 166 (275)
T ss_dssp ECC-CEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred hhc-CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCcc-
Confidence 999 668888776544 5999999999999999999999 8999999999999999999999999999998653322
Q ss_pred cccccccccCCCcCCcccccCCCC-CCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccC
Q 038098 448 SLTQTQTLATIGYMAPEYGREGQV-STNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLS 526 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 526 (580)
......||+.|+|||.+.+..+ +.++||||+||++|||++|+.||..... ...... +. ..
T Consensus 167 --~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~--------~~-~~--- 227 (275)
T 2eue_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-----PVLFKN--------IS-NG--- 227 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH--------HH-HT---
T ss_pred --cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH-----HHHHHH--------HH-hC---
Confidence 2234468999999999887765 7899999999999999999999865211 111110 00 00
Q ss_pred CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 527 QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 527 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
....+..++.++.+++.+||+.||++|||++|+++|
T Consensus 228 ----~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 228 ----VYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ----CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ----CCCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 111223456778999999999999999999999875
No 143
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=4.1e-42 Score=354.22 Aligned_cols=250 Identities=21% Similarity=0.272 Sum_probs=193.7
Q ss_pred cCCCcC-ceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhh-cCCCCcceEEeeeec----CCcee
Q 038098 292 NGFSEN-NLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKR-IRHRNIIKIISSCSS----DDFKA 364 (580)
Q Consensus 292 ~~~~~~-~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~----~~~~~ 364 (580)
++|... +.||+|+||.||+|... +|+.||||++.. ...+.+|++++.+ .+||||+++++++.. .+..+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 456665 68999999999999865 689999999853 2456788888754 489999999998865 56789
Q ss_pred eEeeccCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCC---CCcEEEccccCcc
Q 038098 365 LVLEYMPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMAK 440 (580)
Q Consensus 365 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~---~~~~kl~Dfg~a~ 440 (580)
+||||+++|+|.+++.... ..+++..+..++.||+.||.||| +.+|+||||||+|||++. ++.+||+|||+++
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 9999999999999998754 46999999999999999999999 899999999999999997 7899999999998
Q ss_pred ccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCc--hHHHHHHhhcccchhh
Q 038098 441 PLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDM--TLKHWVNDLLPISVME 518 (580)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~ 518 (580)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .....+.
T Consensus 213 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~--------- 280 (400)
T 1nxk_A 213 ETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR--------- 280 (400)
T ss_dssp ECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH---------
T ss_pred ccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH---------
Confidence 653221 23455789999999999999999999999999999999999999975322111 0111000
Q ss_pred hcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 038098 519 IVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567 (580)
Q Consensus 519 ~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L 567 (580)
.. ...........++.++.+|+.+||+.||++|||+.|+++|-
T Consensus 281 ---~~---~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 281 ---MG---QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp ---HT---CCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred ---cC---cccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 00 00001112245678899999999999999999999999873
No 144
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.4e-42 Score=340.09 Aligned_cols=250 Identities=23% Similarity=0.338 Sum_probs=198.7
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeec
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEY 369 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 369 (580)
++|...+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 56889999999999999999865 68999999997653 33457889999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEe---CCCCcEEEccccCccccC
Q 038098 370 MPHGSLEKCLYSS---NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLL 443 (580)
Q Consensus 370 ~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill---~~~~~~kl~Dfg~a~~~~ 443 (580)
+++|+|.+++... ...+++..++.++.||++||+||| +.+|+||||||+||++ +.++.+||+|||++....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 9999999988643 356999999999999999999999 8999999999999999 556889999999998653
Q ss_pred CCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchh
Q 038098 444 KEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDAN 523 (580)
Q Consensus 444 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 523 (580)
... ......||+.|+|||.+. +.++.++||||+|+++|||++|+.||...... .......
T Consensus 179 ~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~--~~~~~~~-------------- 238 (285)
T 3is5_A 179 SDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE--EVQQKAT-------------- 238 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHH--------------
T ss_pred Ccc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH--HHHhhhc--------------
Confidence 322 233456899999999875 57899999999999999999999998753211 0000000
Q ss_pred ccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 524 LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
..... ........++++.+++.+||+.||++||+++|+++|
T Consensus 239 -~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 239 -YKEPN-YAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp -HCCCC-CCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred -cCCcc-cccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 001112245678899999999999999999999875
No 145
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.6e-42 Score=372.92 Aligned_cols=253 Identities=23% Similarity=0.374 Sum_probs=205.4
Q ss_pred eeccccCceEEEEEeC---CCCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeeccCCCC
Q 038098 299 LIGRGGFGSVYKARIQ---DGMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEYMPHGS 374 (580)
Q Consensus 299 ~lg~G~~g~v~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 374 (580)
.||+|+||.||+|.+. ++..||||+++... ....+.+.+|++++++++||||+++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999764 46679999997543 3356789999999999999999999999976 56899999999999
Q ss_pred hHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCc-ccccc
Q 038098 375 LEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS-LTQTQ 453 (580)
Q Consensus 375 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~ 453 (580)
|.+++...+..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.+...... .....
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 498 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence 99999877778999999999999999999999 899999999999999999999999999999866433221 11223
Q ss_pred cccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhccCCccccc
Q 038098 454 TLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHF 532 (580)
Q Consensus 454 ~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 532 (580)
..+|+.|+|||++.++.++.++|||||||++|||+| |+.||..... ...... +... .+.
T Consensus 499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--~~~~~~------------i~~~------~~~ 558 (613)
T 2ozo_A 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAF------------IEQG------KRM 558 (613)
T ss_dssp ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS--HHHHHH------------HHTT------CCC
T ss_pred CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHHHHH------------HHcC------CCC
Confidence 346688999999998999999999999999999998 9999875321 111111 1111 122
Q ss_pred chhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038098 533 TTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575 (580)
Q Consensus 533 ~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~ 575 (580)
..+..++.++.+|+.+||+.||++||+++++++.|+.+..+..
T Consensus 559 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~ 601 (613)
T 2ozo_A 559 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 601 (613)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHS
T ss_pred CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence 2345678899999999999999999999999999999877654
No 146
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.3e-42 Score=342.36 Aligned_cols=261 Identities=21% Similarity=0.270 Sum_probs=201.8
Q ss_pred HhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc---chhhhHHHHHHHHhhcCCCCcceEEeeeecCCceee
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG---RAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKAL 365 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 365 (580)
..++|.+.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.++++++||||+++++++...+..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 3478999999999999999999865 688999999865422 224678899999999999999999999999999999
Q ss_pred EeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCC
Q 038098 366 VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE 445 (580)
Q Consensus 366 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 445 (580)
||||+++++|.+++...+ .+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 112 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 999999999999987643 5899999999999999999999 899999999999999999999999999999865332
Q ss_pred CCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhcc
Q 038098 446 DQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLL 525 (580)
Q Consensus 446 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 525 (580)
.. .......|+..|+|||.+.+..++.++||||||+++|||++|+.||...... ....... .
T Consensus 188 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~------------~--- 249 (309)
T 2h34_A 188 KL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHIN------------Q--- 249 (309)
T ss_dssp ----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHH------------S---
T ss_pred cc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhc------------c---
Confidence 21 2233456899999999999999999999999999999999999998753110 0111000 0
Q ss_pred CCcccccchhhhhHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHHHHH
Q 038098 526 SQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRI-NAKEIVTRLLKIRDS 573 (580)
Q Consensus 526 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-s~~ev~~~L~~~~~~ 573 (580)
........+..++.++.+++.+||+.||++|| +++++++.|+++...
T Consensus 250 -~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 250 -AIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp -CCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred -CCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 00001122345667899999999999999999 999999999887544
No 147
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1e-42 Score=364.73 Aligned_cols=249 Identities=24% Similarity=0.302 Sum_probs=197.2
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecc---ccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeE
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQ---YGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALV 366 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 366 (580)
.++|+..+.||+|+||.||+|... +|+.||||++... .......+..|+++++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 367889999999999999999865 6899999999754 223445677899999999999999999999999999999
Q ss_pred eeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEEecCCCCCEEeCCCCcEEEccccCccccCCC
Q 038098 367 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS-VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE 445 (580)
Q Consensus 367 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~-~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 445 (580)
|||+++|+|.+++...+ .+++..+..++.||+.||+||| + .+|+||||||+|||++.++.+||+|||+|+.....
T Consensus 227 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp ECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 99999999999887644 5899999999999999999999 7 89999999999999999999999999999854322
Q ss_pred CCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhcc
Q 038098 446 DQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLL 525 (580)
Q Consensus 446 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 525 (580)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...... +..
T Consensus 303 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~--------i~~---- 363 (446)
T 4ejn_A 303 G--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFEL--------ILM---- 363 (446)
T ss_dssp ------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH--------HHH----
T ss_pred C--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-----HHHHHH--------HHh----
Confidence 2 223456799999999999999999999999999999999999999865211 111110 100
Q ss_pred CCcccccchhhhhHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 038098 526 SQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRI-----NAKEIVTR 566 (580)
Q Consensus 526 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~ev~~~ 566 (580)
. ....+..++.++.+|+.+||+.||++|| +++|+++|
T Consensus 364 ~----~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 364 E----EIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp C----CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred C----CCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 0 0112234567899999999999999999 99999875
No 148
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=6.1e-42 Score=336.92 Aligned_cols=251 Identities=22% Similarity=0.304 Sum_probs=203.6
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc------chhhhHHHHHHHHhhcCCCCcceEEeeeecCCcee
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG------RAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKA 364 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 364 (580)
++|...+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 56888999999999999999876 689999999865421 13567899999999999999999999999999999
Q ss_pred eEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCC----cEEEccccCcc
Q 038098 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM----VAHLSDFGMAK 440 (580)
Q Consensus 365 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~----~~kl~Dfg~a~ 440 (580)
+||||+++++|.+++... ..+++..++.++.||+.||.||| +.+++||||||+||+++.++ .+||+|||++.
T Consensus 85 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 999999999999998754 35899999999999999999999 89999999999999998877 89999999998
Q ss_pred ccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhc
Q 038098 441 PLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIV 520 (580)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (580)
...... ......+++.|+|||.+.+..++.++||||||+++|||++|+.||..... ...... +.
T Consensus 161 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~--------~~ 224 (283)
T 3bhy_A 161 KIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK-----QETLTN--------IS 224 (283)
T ss_dssp ECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHH--------HH
T ss_pred eccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch-----HHHHHH--------hH
Confidence 653322 22345689999999999988999999999999999999999999865311 111100 00
Q ss_pred chhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 521 DANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 521 d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.............++..+.+++.+||+.||++||+++|+++|
T Consensus 225 ----~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 225 ----AVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp ----TTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred ----hcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 000111112234556789999999999999999999999985
No 149
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.3e-42 Score=347.27 Aligned_cols=257 Identities=28% Similarity=0.465 Sum_probs=207.2
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEE--EEEEEecc-ccchhhhHHHHHHHHhhc-CCCCcceEEeeeecCCceeeE
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEV--AVKVFDLQ-YGRAFKSFDIECDMIKRI-RHRNIIKIISSCSSDDFKALV 366 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~v--avK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 366 (580)
++|...+.||+|+||.||+|+.. +|..+ |+|++... .......+..|+++++++ +||||+++++++...+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 57888999999999999999864 56654 99988643 233456788999999999 899999999999999999999
Q ss_pred eeccCCCChHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcE
Q 038098 367 LEYMPHGSLEKCLYSSN---------------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVA 431 (580)
Q Consensus 367 ~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~ 431 (580)
|||+++|+|.+++...+ ..+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeE
Confidence 99999999999987654 46899999999999999999999 9999999999999999999999
Q ss_pred EEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHh
Q 038098 432 HLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVND 510 (580)
Q Consensus 432 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~ 510 (580)
||+|||+++.... ........++..|+|||.+.+..++.++||||+||++|||+| |+.||..... ......
T Consensus 182 kL~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-----~~~~~~ 253 (327)
T 1fvr_A 182 KIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----AELYEK 253 (327)
T ss_dssp EECCTTCEESSCE---ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHH
T ss_pred EEcccCcCccccc---cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH-----HHHHHH
Confidence 9999999974321 112233457889999999988889999999999999999998 9999865311 111111
Q ss_pred hcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 038098 511 LLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574 (580)
Q Consensus 511 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~ 574 (580)
+... .....+..++.++.+++.+||+.||++||+++|++++|+++..+.
T Consensus 254 ---------~~~~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 254 ---------LPQG------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp ---------GGGT------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred ---------hhcC------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 1110 011223456778999999999999999999999999999987754
No 150
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.9e-42 Score=342.44 Aligned_cols=267 Identities=21% Similarity=0.253 Sum_probs=200.6
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc--chhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEee
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG--RAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 368 (580)
++|+..+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57889999999999999999875 589999999854432 234667889999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCc
Q 038098 369 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS 448 (580)
Q Consensus 369 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 448 (580)
|+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 83 ~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 157 (311)
T 4agu_A 83 YCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD- 157 (311)
T ss_dssp CCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred eCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-
Confidence 99999999877644 45899999999999999999999 89999999999999999999999999999986643222
Q ss_pred ccccccccCCCcCCcccccC-CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhccc---chhhhcch-h
Q 038098 449 LTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPI---SVMEIVDA-N 523 (580)
Q Consensus 449 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~-~ 523 (580)
......||..|+|||.+.+ ..++.++||||+|+++|||++|+.||......+ ........... ........ .
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 234 (311)
T 4agu_A 158 -YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD--QLYLIRKTLGDLIPRHQQVFSTNQ 234 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCSCCHHHHHHHHTCG
T ss_pred -ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhccccccccccccccc
Confidence 2234568999999998876 668999999999999999999999997632211 11111111000 00000000 0
Q ss_pred cc-----CCc---ccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 524 LL-----SQK---DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 524 ~~-----~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.. ... .........++.++.+++.+||+.||++|||++|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 235 YFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00 000 00001113467789999999999999999999999976
No 151
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.2e-42 Score=351.98 Aligned_cols=264 Identities=20% Similarity=0.206 Sum_probs=200.5
Q ss_pred cCCCcCceeccccCceEEEEEeC----CCCEEEEEEEeccccc-----------hhhhHHHHHHHHhhcCCCCcceEEee
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFDLQYGR-----------AFKSFDIECDMIKRIRHRNIIKIISS 356 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~~~~~ 356 (580)
++|.+.+.||+|+||.||+|... ++..||+|++...... ....+..|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56889999999999999999875 5788999998654321 12345678888999999999999999
Q ss_pred eec----CCceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCC--c
Q 038098 357 CSS----DDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM--V 430 (580)
Q Consensus 357 ~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~--~ 430 (580)
+.. ....++||||+ +++|.+++...+ .+++..++.++.||+.||+||| +.+|+||||||+||+++.++ .
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTTS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCCc
Confidence 877 67889999999 999999987655 7999999999999999999999 89999999999999999887 9
Q ss_pred EEEccccCccccCCCCCc-----ccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHH
Q 038098 431 AHLSDFGMAKPLLKEDQS-----LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505 (580)
Q Consensus 431 ~kl~Dfg~a~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~ 505 (580)
+||+|||+++.+...... .......||..|+|||.+.+..++.++|||||||++|||+||+.||...........
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~ 271 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ 271 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHH
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHH
Confidence 999999999876432211 112445799999999999998999999999999999999999999964322211111
Q ss_pred HHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 038098 506 HWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKI 570 (580)
Q Consensus 506 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~ 570 (580)
........ .....+... .....++.++.+++.+||+.||++||++++|++.|+++
T Consensus 272 ~~~~~~~~-~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 272 TAKTNLLD-ELPQSVLKW---------APSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp HHHHHHHH-TTTHHHHHH---------SCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred HHHHhhcc-cccHHHHhh---------ccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 11111100 000000000 00124667899999999999999999999999999764
No 152
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-42 Score=352.18 Aligned_cols=266 Identities=14% Similarity=0.145 Sum_probs=209.8
Q ss_pred cCCCcCceeccccCceEEEEEeCC---------CCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcce----------
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQD---------GMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIK---------- 352 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~---------- 352 (580)
++|.+.+.||+|+||.||+|.... ++.||+|++... ..+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 578899999999999999998653 789999998643 56889999999999999988
Q ss_pred -----EEeeeec-CCceeeEeeccCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEe
Q 038098 353 -----IISSCSS-DDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL 425 (580)
Q Consensus 353 -----~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill 425 (580)
+++++.. .+..++||||+ +++|.+++... ...+++..++.++.||+.||+||| +.+|+||||||+||++
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl~ 192 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIFV 192 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEEE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEE
Confidence 5666655 67889999999 99999999875 357999999999999999999999 8999999999999999
Q ss_pred CCCC--cEEEccccCccccCCCCCc-----ccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccc
Q 038098 426 DDNM--VAHLSDFGMAKPLLKEDQS-----LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIF 498 (580)
Q Consensus 426 ~~~~--~~kl~Dfg~a~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~ 498 (580)
+.++ .+||+|||+++.+...... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 9998 9999999999866433221 11234479999999999999899999999999999999999999997643
Q ss_pred cCCchHHHHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 038098 499 FGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLK 576 (580)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~~ 576 (580)
........+...... ...... ........++.++.+++.+||+.||++||+++++++.|+++.++...
T Consensus 273 ~~~~~~~~~~~~~~~-~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 340 (352)
T 2jii_A 273 PNTEDIMKQKQKFVD-KPGPFV---------GPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV 340 (352)
T ss_dssp TCHHHHHHHHHHHHH-SCCCEE---------CTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHhccC-Chhhhh---------hhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC
Confidence 222222221111000 000000 00011124567899999999999999999999999999999887653
No 153
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.1e-42 Score=355.37 Aligned_cols=276 Identities=19% Similarity=0.275 Sum_probs=213.0
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCC--ceeeEe
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDD--FKALVL 367 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv~ 367 (580)
++|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 56888999999999999999876 58999999996543 334567789999999999999999999987655 679999
Q ss_pred eccCCCChHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEe----CCCCcEEEccccCccc
Q 038098 368 EYMPHGSLEKCLYSSN--YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL----DDNMVAHLSDFGMAKP 441 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill----~~~~~~kl~Dfg~a~~ 441 (580)
||+++|+|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 9999999999987654 23899999999999999999999 8999999999999999 7888899999999986
Q ss_pred cCCCCCcccccccccCCCcCCcccccC--------CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHH---HHHh
Q 038098 442 LLKEDQSLTQTQTLATIGYMAPEYGRE--------GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKH---WVND 510 (580)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~---~~~~ 510 (580)
..... ......||..|+|||.+.+ ..++.++|||||||++|||+||+.||............ ....
T Consensus 166 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 242 (396)
T 4eut_A 166 LEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (396)
T ss_dssp CCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS
T ss_pred ccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC
Confidence 63322 2234569999999998764 56788999999999999999999999653322222111 1111
Q ss_pred hcccchhhhc---chh--ccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 038098 511 LLPISVMEIV---DAN--LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDS 573 (580)
Q Consensus 511 ~~~~~~~~~~---d~~--~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~ 573 (580)
..+..+.... +.. ...............+..+.+++.+||+.||++||+++|+++.++++.++
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 1111110000 000 00011111223356788899999999999999999999999999887653
No 154
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.2e-42 Score=351.45 Aligned_cols=247 Identities=27% Similarity=0.371 Sum_probs=202.1
Q ss_pred cCCCcCceeccccCceEEEEEe-CCCCEEEEEEEecccc---chhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 292 NGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFDLQYG---RAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
+.|...+.||+|+||.||+|+. .+|+.||||++..... .....+.+|++++++++||||+++++++...+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4488889999999999999986 5789999999965422 23457889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 447 (580)
||+. |+|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence 9997 5888888766677999999999999999999999 899999999999999999999999999999865322
Q ss_pred cccccccccCCCcCCccccc---CCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhc
Q 038098 448 SLTQTQTLATIGYMAPEYGR---EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANL 524 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 524 (580)
....||+.|+|||.+. .+.++.++|||||||++|||++|+.||..... ... .. .+.....
T Consensus 208 ----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~----~~~-~~--------~~~~~~~ 270 (348)
T 1u5q_A 208 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA----MSA-LY--------HIAQNES 270 (348)
T ss_dssp ----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH----HHH-HH--------HHHHSCC
T ss_pred ----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh----HHH-HH--------HHHhcCC
Confidence 2346899999999874 56789999999999999999999999865211 110 00 0110000
Q ss_pred cCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 038098 525 LSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567 (580)
Q Consensus 525 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L 567 (580)
.......++..+.+++.+||+.||++|||+++++++-
T Consensus 271 ------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 271 ------PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp ------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred ------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 0011234567789999999999999999999998764
No 155
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.6e-42 Score=351.78 Aligned_cols=274 Identities=24% Similarity=0.269 Sum_probs=208.3
Q ss_pred ccCHHHHHHHhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcC-----CCCcceEE
Q 038098 281 RFTYLEIFQATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIR-----HRNIIKII 354 (580)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~~~ 354 (580)
.+++.+.....++|.+.+.||+|+||.||+|+.. +++.||||++... ......+..|+++++.+. ||||++++
T Consensus 24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~ 102 (360)
T 3llt_A 24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYH 102 (360)
T ss_dssp SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeeccc
Confidence 3444444455688999999999999999999864 6899999998632 233456778999999996 99999999
Q ss_pred eeeecCCceeeEeeccCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCC------
Q 038098 355 SSCSSDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD------ 427 (580)
Q Consensus 355 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~------ 427 (580)
+++...+..++||||+ +++|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.
T Consensus 103 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~ 178 (360)
T 3llt_A 103 GKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKS 178 (360)
T ss_dssp EEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEE
T ss_pred ceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEcccccccc
Confidence 9999999999999999 889999988665 45899999999999999999999 999999999999999975
Q ss_pred -------------------CCcEEEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHH
Q 038098 428 -------------------NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETF 488 (580)
Q Consensus 428 -------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ell 488 (580)
++.+||+|||+++..... .....||+.|+|||.+.+..++.++||||+||++|||+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 253 (360)
T 3llt_A 179 LITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELY 253 (360)
T ss_dssp EEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred ccchhcccccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHH
Confidence 789999999999864322 23456899999999999999999999999999999999
Q ss_pred hCCCCCCccccCCchHHHHHHhhccc---c-h--------hhhcchhcc-CCccccc--------------chhhhhHHH
Q 038098 489 TRKKPTDEIFFGDMTLKHWVNDLLPI---S-V--------MEIVDANLL-SQKDEHF--------------TTKGQCVSF 541 (580)
Q Consensus 489 tg~~p~~~~~~~~~~~~~~~~~~~~~---~-~--------~~~~d~~~~-~~~~~~~--------------~~~~~~~~~ 541 (580)
||+.||...... ............ . . ...++.... ....... .........
T Consensus 254 ~g~~pf~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (360)
T 3llt_A 254 TGSLLFRTHEHM--EHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHEL 331 (360)
T ss_dssp HSSCSCCCSSHH--HHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHH
T ss_pred HCCCCCCCCcHH--HHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHH
Confidence 999999753211 111111111100 0 0 000000000 0000000 001112367
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 542 IFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 542 l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
+.+|+.+||+.||++|||++|+++|
T Consensus 332 l~~li~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 332 FCDFLYSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHhcCChhhCCCHHHHhcC
Confidence 8899999999999999999999875
No 156
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.4e-42 Score=348.89 Aligned_cols=262 Identities=24% Similarity=0.386 Sum_probs=208.1
Q ss_pred hcCCCcCceeccccCceEEEEEe------CCCCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCce
Q 038098 291 TNGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFK 363 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 363 (580)
.++|.+.+.||+|+||.||+|.+ .+++.||||++.... ......+.+|+.++++++||||+++++++...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 36799999999999999999984 257789999986432 23456788999999999999999999999999999
Q ss_pred eeEeeccCCCChHHHhhcCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCC---CCcEEEc
Q 038098 364 ALVLEYMPHGSLEKCLYSSN------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLS 434 (580)
Q Consensus 364 ~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~---~~~~kl~ 434 (580)
++||||+++|+|.+++.... ..+++..++.++.||+.||.||| +.+|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 99999999999999998654 45899999999999999999999 899999999999999984 4469999
Q ss_pred cccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcc
Q 038098 435 DFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLP 513 (580)
Q Consensus 435 Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 513 (580)
|||++................+|+.|+|||.+.+..++.++||||||+++|||+| |+.||..... .....++.
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~~---- 259 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT---- 259 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHHH----
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH--HHHHHHHh----
Confidence 9999986543333333344568899999999988899999999999999999998 9999865211 11111111
Q ss_pred cchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038098 514 ISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575 (580)
Q Consensus 514 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~ 575 (580)
... ....+..++..+.+++.+||+.||++||++.|++++|+.+...-.
T Consensus 260 --------~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~ 307 (327)
T 2yfx_A 260 --------SGG------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 307 (327)
T ss_dssp --------TTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred --------cCC------CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHH
Confidence 000 111234566789999999999999999999999999998876543
No 157
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=6.2e-42 Score=360.28 Aligned_cols=271 Identities=20% Similarity=0.268 Sum_probs=187.6
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeec-----CCc
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSS-----DDF 362 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~~ 362 (580)
.++|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 467999999999999999999865 78999999986432 2345678899999999999999999999843 357
Q ss_pred eeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCcccc
Q 038098 363 KALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL 442 (580)
Q Consensus 363 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~ 442 (580)
.++||||+ +|+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEecc-ccchhhhcccC-CCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 89999998 46999988654 46999999999999999999999 899999999999999999999999999999866
Q ss_pred CCCCCc-------------------------ccccccccCCCcCCcccc-cCCCCCCchhhHhHHHHHHHHHh-------
Q 038098 443 LKEDQS-------------------------LTQTQTLATIGYMAPEYG-REGQVSTNGDVYSFGIMLMETFT------- 489 (580)
Q Consensus 443 ~~~~~~-------------------------~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dvws~Gvil~ellt------- 489 (580)
...... ......+||+.|+|||++ ....++.++||||+||++|||+|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~ 286 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVA 286 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCS
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccc
Confidence 422111 123455789999999976 55679999999999999999999
Q ss_pred ----CCCCCCccccCC------------------chHHHHHHhhccc---c-h--------hhhcchhccCCcccccchh
Q 038098 490 ----RKKPTDEIFFGD------------------MTLKHWVNDLLPI---S-V--------MEIVDANLLSQKDEHFTTK 535 (580)
Q Consensus 490 ----g~~p~~~~~~~~------------------~~~~~~~~~~~~~---~-~--------~~~~d~~~~~~~~~~~~~~ 535 (580)
|+++|.+..... ......+...... . + ...+...............
T Consensus 287 ~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (458)
T 3rp9_A 287 YHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERF 366 (458)
T ss_dssp SGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGS
T ss_pred ccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHC
Confidence 555554321000 0000000000000 0 0 0000000000000111122
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 536 GQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 536 ~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
...+.++.+|+.+||..||++|||++|+++|
T Consensus 367 ~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 367 PASSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 3457889999999999999999999999986
No 158
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=4.1e-42 Score=364.62 Aligned_cols=253 Identities=23% Similarity=0.342 Sum_probs=208.4
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc---cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeE
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY---GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALV 366 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 366 (580)
.++|...+.||+|+||.||+|+.. +|+.||+|++.... ......+..|++++++++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 356888999999999999999875 79999999996542 23446678899999999999999999999999999999
Q ss_pred eeccCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCC
Q 038098 367 LEYMPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE 445 (580)
Q Consensus 367 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 445 (580)
|||++||+|.+++...+ ..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999987654 35999999999999999999999 899999999999999999999999999999866432
Q ss_pred CCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhcc
Q 038098 446 DQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLL 525 (580)
Q Consensus 446 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 525 (580)
. ......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....... .+..
T Consensus 340 ~---~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~-~~~~i~~---------~i~~--- 403 (576)
T 2acx_A 340 Q---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEVER---------LVKE--- 403 (576)
T ss_dssp C---CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC-CHHHHHH---------HHHH---
T ss_pred c---cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch-hHHHHHH---------Hhhc---
Confidence 2 2234579999999999999899999999999999999999999997632211 1111111 0000
Q ss_pred CCcccccchhhhhHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 038098 526 SQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRI-----NAKEIVTR 566 (580)
Q Consensus 526 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~ev~~~ 566 (580)
. ....+..++.++.+|+.+||+.||++|| +++|+++|
T Consensus 404 ~----~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 404 V----PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp C----CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred c----cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 0 0111234567899999999999999999 78999876
No 159
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=5.2e-42 Score=341.05 Aligned_cols=251 Identities=22% Similarity=0.300 Sum_probs=203.5
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeec
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEY 369 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 369 (580)
.++|...+.||+|+||.||+|+.. +|+.||+|++..........+.+|++++++++||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 457889999999999999999865 7899999999765444456788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEe---CCCCcEEEccccCccccCCCC
Q 038098 370 MPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLLKED 446 (580)
Q Consensus 370 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill---~~~~~~kl~Dfg~a~~~~~~~ 446 (580)
+++++|.+++...+ .+++..+..++.|++.||.||| +.+++||||||+||++ +.++.+||+|||++......
T Consensus 88 ~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~- 162 (304)
T 2jam_A 88 VSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG- 162 (304)
T ss_dssp CCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-
T ss_pred CCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-
Confidence 99999999886544 5899999999999999999999 8999999999999999 78899999999999754221
Q ss_pred CcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccC
Q 038098 447 QSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLS 526 (580)
Q Consensus 447 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 526 (580)
......||+.|+|||.+.+..++.++||||+|+++|||++|+.||..... ..... .+... ..
T Consensus 163 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~--------~i~~~-~~- 224 (304)
T 2jam_A 163 ---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE-----SKLFE--------KIKEG-YY- 224 (304)
T ss_dssp ---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHH--------HHHHC-CC-
T ss_pred ---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHH--------HHHcC-CC-
Confidence 22334689999999999999999999999999999999999999865211 11111 00000 00
Q ss_pred CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 527 QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 527 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.........++.++.+++.+||+.||++||+++|+++|
T Consensus 225 --~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 225 --EFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp --CCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred --CCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00111223466789999999999999999999999875
No 160
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=6.9e-42 Score=356.59 Aligned_cols=272 Identities=22% Similarity=0.263 Sum_probs=199.6
Q ss_pred HhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecC-----C
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSD-----D 361 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~ 361 (580)
..++|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++... .
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 3568999999999999999999865 68899999996432 23456788999999999999999999998765 5
Q ss_pred ceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccc
Q 038098 362 FKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 441 (580)
Q Consensus 362 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~ 441 (580)
..++||||++ |+|.+++... ..+++..+..++.||++||+||| +.+|+||||||+|||++.++.+||+|||+|+.
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecCC-cCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 6899999996 5999988754 45999999999999999999999 99999999999999999999999999999987
Q ss_pred cCCCCCc--------------------ccccccccCCCcCCcccc-cCCCCCCchhhHhHHHHHHHHHhCCCCCCccccC
Q 038098 442 LLKEDQS--------------------LTQTQTLATIGYMAPEYG-REGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFG 500 (580)
Q Consensus 442 ~~~~~~~--------------------~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~ 500 (580)
....... .......||+.|+|||.+ ....++.++||||+||++|||++|..||.....+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~ 258 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTN 258 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGG
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccccccc
Confidence 6433211 123566799999999985 5567999999999999999999976665432111
Q ss_pred C-------c--------------------hHHHHHHhh--cc---------cchhhhcchhccCCcccccchhhhhHHHH
Q 038098 501 D-------M--------------------TLKHWVNDL--LP---------ISVMEIVDANLLSQKDEHFTTKGQCVSFI 542 (580)
Q Consensus 501 ~-------~--------------------~~~~~~~~~--~~---------~~~~~~~d~~~~~~~~~~~~~~~~~~~~l 542 (580)
+ . .+.....-. .+ ......+.................+++++
T Consensus 259 ~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 338 (432)
T 3n9x_A 259 RFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDG 338 (432)
T ss_dssp CCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHH
T ss_pred ccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHH
Confidence 0 0 000000000 00 00000000000000000011123467889
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHH
Q 038098 543 FNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 543 ~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.+|+.+||+.||++|||++|+++|
T Consensus 339 ~dLl~~mL~~dP~~R~ta~e~L~H 362 (432)
T 3n9x_A 339 INLLESMLKFNPNKRITIDQALDH 362 (432)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHTC
T ss_pred HHHHHHHhcCCcccCCCHHHHhcC
Confidence 999999999999999999999986
No 161
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=6.9e-42 Score=349.16 Aligned_cols=254 Identities=16% Similarity=0.155 Sum_probs=207.8
Q ss_pred hcCCCcCceeccccCceEEEEE------eCCCCEEEEEEEeccccchhhhHHHHHHHHhhcC---CCCcceEEeeeecCC
Q 038098 291 TNGFSENNLIGRGGFGSVYKAR------IQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIR---HRNIIKIISSCSSDD 361 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~------~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~ 361 (580)
.++|.+.+.||+|+||.||+|. ..+++.||||++... ....+..|++++.+++ |+||+++++++...+
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 4678889999999999999993 446889999998643 3456777888888886 999999999999999
Q ss_pred ceeeEeeccCCCChHHHhhc----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCC----------
Q 038098 362 FKALVLEYMPHGSLEKCLYS----SNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---------- 427 (580)
Q Consensus 362 ~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~---------- 427 (580)
..++||||+++|+|.+++.. ....+++..++.++.||++||+||| +.+|+||||||+|||++.
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~~ 217 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDD 217 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC-----
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCcccccc
Confidence 99999999999999999875 3456999999999999999999999 999999999999999998
Q ss_pred -CCcEEEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHH
Q 038098 428 -NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKH 506 (580)
Q Consensus 428 -~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~ 506 (580)
++.+||+|||+|+.+.............||+.|+|||++.+..++.++|||||||++|||+||+.||.....+...
T Consensus 218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~--- 294 (365)
T 3e7e_A 218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK--- 294 (365)
T ss_dssp -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE---
T ss_pred ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee---
Confidence 8999999999998654333344455667999999999999999999999999999999999999998542211100
Q ss_pred HHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCC-CCHHHHHHHHHHHHHHHH
Q 038098 507 WVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQR-INAKEIVTRLLKIRDSLL 575 (580)
Q Consensus 507 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R-ps~~ev~~~L~~~~~~~~ 575 (580)
.+. ...+. ...+.+.+++.+|++.+|.+| |+++++.+.|+++..+..
T Consensus 295 -------------~~~-----~~~~~----~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~ 342 (365)
T 3e7e_A 295 -------------PEG-----LFRRL----PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHY 342 (365)
T ss_dssp -------------ECS-----CCTTC----SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred -------------ech-----hcccc----CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhh
Confidence 000 00011 124567789999999999998 588888888888877643
No 162
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=8.3e-44 Score=353.81 Aligned_cols=269 Identities=24% Similarity=0.377 Sum_probs=191.2
Q ss_pred hcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhh--cCCCCcceEEeeeecCC----cee
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKR--IRHRNIIKIISSCSSDD----FKA 364 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~----~~~ 364 (580)
.++|.+.+.||+|+||.||+|++. |+.||||++... ....+..|.+++.. ++||||+++++++.... ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 357999999999999999999876 899999998643 33567778888887 79999999999998766 789
Q ss_pred eEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeEEecCCCCCEEeCCCCcEEEccccCc
Q 038098 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY-----SVPIIHCDLKPSNVLLDDNMVAHLSDFGMA 439 (580)
Q Consensus 365 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~-----~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a 439 (580)
+||||+++|+|.+++... .+++..++.++.|++.|++|||... +.+|+||||||+||+++.++.+||+|||++
T Consensus 78 lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EEEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred EEEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 999999999999999654 4788889999999999999999432 678999999999999999999999999999
Q ss_pred cccCCCCCcc--cccccccCCCcCCcccccCC------CCCCchhhHhHHHHHHHHHhCC----------CCCCccccCC
Q 038098 440 KPLLKEDQSL--TQTQTLATIGYMAPEYGREG------QVSTNGDVYSFGIMLMETFTRK----------KPTDEIFFGD 501 (580)
Q Consensus 440 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Dvws~Gvil~elltg~----------~p~~~~~~~~ 501 (580)
+......... ......||+.|+|||.+.+. .++.++|||||||++|||+||. .||.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence 7654332221 12334699999999998766 4456899999999999999994 4443321111
Q ss_pred chHHHHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 038098 502 MTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574 (580)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~ 574 (580)
.....+ ...+...........+ .....++..+.+++.+||+.||++|||++|+++.|+++.++.
T Consensus 236 ~~~~~~--------~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 236 PSVEEM--------RKVVCEQKLRPNIPNR-WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CCCC-C--------HHHHTTSCCCCCCCGG-GGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred ccHHHH--------HHHHHHhhcCCCcccc-ccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 111111 1111111111111111 122356778999999999999999999999999999886554
No 163
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=4.9e-42 Score=356.08 Aligned_cols=254 Identities=24% Similarity=0.284 Sum_probs=195.7
Q ss_pred HHhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc--------cchhhhHHHHHHHHhhcCCCCcceEEeeeec
Q 038098 289 QATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY--------GRAFKSFDIECDMIKRIRHRNIIKIISSCSS 359 (580)
Q Consensus 289 ~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 359 (580)
...++|...+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34678999999999999999999865 68999999996542 1223468899999999999999999999864
Q ss_pred CCceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCC---cEEEccc
Q 038098 360 DDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM---VAHLSDF 436 (580)
Q Consensus 360 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~---~~kl~Df 436 (580)
+..++||||+++|+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++ .+||+||
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred -CceEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeec
Confidence 4578999999999999988654 45999999999999999999999 89999999999999997544 5999999
Q ss_pred cCccccCCCCCcccccccccCCCcCCcccccC---CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcc
Q 038098 437 GMAKPLLKEDQSLTQTQTLATIGYMAPEYGRE---GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLP 513 (580)
Q Consensus 437 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 513 (580)
|+++..... .......||+.|+|||++.. ..++.++||||+||++|||+||+.||....... .+......
T Consensus 287 G~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~~i~~--- 359 (419)
T 3i6u_A 287 GHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITS--- 359 (419)
T ss_dssp STTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-CHHHHHHT---
T ss_pred ccceecCCC---ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-HHHHHHhc---
Confidence 999865322 22334579999999999853 567889999999999999999999997532211 11111111
Q ss_pred cchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 514 ISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 514 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.. ..........++.++.+++.+||+.||++||+++|+++|
T Consensus 360 ---------~~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 360 ---------GK---YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp ---------TC---CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ---------CC---CCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 00 000111224467789999999999999999999999986
No 164
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=9.7e-42 Score=361.28 Aligned_cols=251 Identities=22% Similarity=0.300 Sum_probs=205.0
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
.++|.+.+.||+|+||+||+|... +|+.||||++.... ......+.+|++++++++||||+++++++......++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 456999999999999999999865 78999999996432 334577889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeC---CCCcEEEccccCccccCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD---DNMVAHLSDFGMAKPLLK 444 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~---~~~~~kl~Dfg~a~~~~~ 444 (580)
||+++|+|.+++...+ .+++..+..++.||+.||.||| +.+|+||||||+||+++ .++.+||+|||+++....
T Consensus 101 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 9999999999886544 5899999999999999999999 89999999999999995 556799999999986533
Q ss_pred CCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhc
Q 038098 445 EDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANL 524 (580)
Q Consensus 445 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 524 (580)
.. ......||+.|+|||.+.+ .++.++||||+||++|+|++|+.||..... ... +....
T Consensus 177 ~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~------------~~~i~ 235 (486)
T 3mwu_A 177 NT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-----YDI------------LKRVE 235 (486)
T ss_dssp C-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHH------------HHHHH
T ss_pred CC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHH------------HHHHH
Confidence 22 2344579999999999865 689999999999999999999999865211 011 11101
Q ss_pred cCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 525 LSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 525 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
........+.+..++.++.+++.+||+.||++|||+.|+++|
T Consensus 236 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 236 TGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp HTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred hCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111111223345667889999999999999999999999986
No 165
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.7e-42 Score=344.25 Aligned_cols=253 Identities=24% Similarity=0.343 Sum_probs=202.8
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeec
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEY 369 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 369 (580)
.+.|++.+.||+|+||.||+|... +|+.||+|++..........+..|++++++++||||+++++++...+..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 467889999999999999999976 5899999999766556678889999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCcc
Q 038098 370 MPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSL 449 (580)
Q Consensus 370 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 449 (580)
+++++|.+++......+++..++.++.||+.||.||| +.+++||||||+||+++.++.+||+|||++...... ..
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~ 172 (302)
T 2j7t_A 98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--LQ 172 (302)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH--HH
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc--cc
Confidence 9999999998876677999999999999999999999 899999999999999999999999999987633111 11
Q ss_pred cccccccCCCcCCcccc-----cCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhc
Q 038098 450 TQTQTLATIGYMAPEYG-----REGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANL 524 (580)
Q Consensus 450 ~~~~~~~~~~y~aPE~~-----~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 524 (580)
......||..|+|||.+ ....++.++||||||+++|||++|+.||....... .......
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~--------------- 236 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAK--------------- 236 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHH---------------
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHHhc---------------
Confidence 12334689999999987 46678999999999999999999999987531100 0000000
Q ss_pred cCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 525 LSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 525 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
........+..++.++.+++.+||+.||++|||++|+++|
T Consensus 237 --~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 237 --SDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp --SCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred --cCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0001112234567789999999999999999999999874
No 166
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=8.3e-42 Score=341.25 Aligned_cols=252 Identities=26% Similarity=0.369 Sum_probs=204.2
Q ss_pred HhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEee
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 368 (580)
..+.|...+.||+|+||.||+|... +|+.||+|++... .....+..|++++++++||||+++++++...+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 3467999999999999999999875 5899999999754 345678899999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCc
Q 038098 369 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS 448 (580)
Q Consensus 369 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 448 (580)
|+++++|.+++......+++..++.++.||+.||.||| +.+++|+||+|+||+++.++.+||+|||++.......
T Consensus 105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-- 179 (314)
T 3com_A 105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM-- 179 (314)
T ss_dssp CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB--
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc--
Confidence 99999999999866667999999999999999999999 8999999999999999999999999999998653322
Q ss_pred ccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCCc
Q 038098 449 LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQK 528 (580)
Q Consensus 449 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 528 (580)
.......|+..|+|||.+.+..++.++||||||+++|||++|+.||..... ..... . +. ...
T Consensus 180 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~---------~-~~----~~~ 241 (314)
T 3com_A 180 AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP----MRAIF---------M-IP----TNP 241 (314)
T ss_dssp SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH----HHHHH---------H-HH----HSC
T ss_pred cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh----HHHHH---------H-Hh----cCC
Confidence 123345689999999999998999999999999999999999999865211 00000 0 00 001
Q ss_pred ccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 529 DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 529 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
......+..++..+.+++.+||+.||++||++.++++|
T Consensus 242 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 242 PPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp CCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 11122334567789999999999999999999999875
No 167
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.8e-42 Score=342.15 Aligned_cols=263 Identities=24% Similarity=0.354 Sum_probs=210.6
Q ss_pred hcCCCcCc-eeccccCceEEEEEeC---CCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCcee
Q 038098 291 TNGFSENN-LIGRGGFGSVYKARIQ---DGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKA 364 (580)
Q Consensus 291 ~~~~~~~~-~lg~G~~g~v~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 364 (580)
.++|.+.+ .||+|+||.||+|.+. +++.||||++.... ....+.+.+|++++++++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 45677777 9999999999999642 46889999996542 22356788999999999999999999999 566789
Q ss_pred eEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCC
Q 038098 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLK 444 (580)
Q Consensus 365 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 444 (580)
+||||+++++|.+++...+ .+++..++.++.||+.||+||| +.+++||||||+||+++.++.+||+|||++.....
T Consensus 94 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp EEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 9999999999999997654 5899999999999999999999 89999999999999999999999999999987644
Q ss_pred CCCcc-cccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcch
Q 038098 445 EDQSL-TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDA 522 (580)
Q Consensus 445 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 522 (580)
..... ......++..|+|||.+.+..++.++||||||+++|||+| |+.||..... ...... +..
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~------------~~~ 235 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVTAM------------LEK 235 (291)
T ss_dssp TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHH------------HHT
T ss_pred CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHH------------HHc
Confidence 33221 1223346788999999988889999999999999999999 9999865311 111111 111
Q ss_pred hccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhhh
Q 038098 523 NLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLKNV 578 (580)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~~~~ 578 (580)
. .....+..++.++.+++.+||+.||++||++.|+++.|+++..+..+..
T Consensus 236 ~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~ 285 (291)
T 1xbb_A 236 G------ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEG 285 (291)
T ss_dssp T------CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred C------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhcc
Confidence 0 0112234567889999999999999999999999999999988876554
No 168
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.5e-42 Score=353.46 Aligned_cols=271 Identities=24% Similarity=0.342 Sum_probs=194.3
Q ss_pred HHhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecc--ccchhhhHHHHHHHHhhcC-CCCcceEEeeeecCC--c
Q 038098 289 QATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQ--YGRAFKSFDIECDMIKRIR-HRNIIKIISSCSSDD--F 362 (580)
Q Consensus 289 ~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~--~ 362 (580)
...++|++.+.||+|+||.||+|... +|+.||||++... .......+.+|+.+++++. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 34578999999999999999999864 7899999998543 2234566788999999997 999999999987544 6
Q ss_pred eeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCcccc
Q 038098 363 KALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL 442 (580)
Q Consensus 363 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~ 442 (580)
.++||||++ |+|.+++... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.+
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 899999997 5999988763 5899999999999999999999 999999999999999999999999999999865
Q ss_pred CCCC-------------------CcccccccccCCCcCCcccccC-CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCc
Q 038098 443 LKED-------------------QSLTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDM 502 (580)
Q Consensus 443 ~~~~-------------------~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~ 502 (580)
.... .........||+.|+|||.+.+ ..++.++||||+||++|||++|++||.+.... .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~ 238 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM-N 238 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-H
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH-H
Confidence 3211 1112344579999999998876 67899999999999999999999999753211 1
Q ss_pred hHHHHHHhhcccc---h--------hhhcch---hc---cCCccccc----------chhhhhHHHHHHHHhhccCCCCC
Q 038098 503 TLKHWVNDLLPIS---V--------MEIVDA---NL---LSQKDEHF----------TTKGQCVSFIFNLAMKCTVESPE 555 (580)
Q Consensus 503 ~~~~~~~~~~~~~---~--------~~~~d~---~~---~~~~~~~~----------~~~~~~~~~l~~l~~~cl~~dP~ 555 (580)
.+.......-... + ...++. .. .......+ .....++.++.+|+.+||+.||+
T Consensus 239 ~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~ 318 (388)
T 3oz6_A 239 QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPN 318 (388)
T ss_dssp HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcc
Confidence 1111111000000 0 000000 00 00000000 01124567899999999999999
Q ss_pred CCCCHHHHHHH
Q 038098 556 QRINAKEIVTR 566 (580)
Q Consensus 556 ~Rps~~ev~~~ 566 (580)
+|||++|+++|
T Consensus 319 ~R~t~~e~l~H 329 (388)
T 3oz6_A 319 KRISANDALKH 329 (388)
T ss_dssp GSCCHHHHTTS
T ss_pred cCCCHHHHhCC
Confidence 99999999987
No 169
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2.5e-42 Score=338.83 Aligned_cols=252 Identities=28% Similarity=0.424 Sum_probs=201.4
Q ss_pred hcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeec-CCceeeEeec
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSS-DDFKALVLEY 369 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~ 369 (580)
.++|...+.||+|+||.||+|... |+.||||++... ...+.+.+|++++++++||||+++++++.+ .+..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 367888999999999999999886 889999998643 345778899999999999999999998754 4578999999
Q ss_pred cCCCChHHHhhcCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCc
Q 038098 370 MPHGSLEKCLYSSNY-ILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS 448 (580)
Q Consensus 370 ~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 448 (580)
+++|+|.+++...+. .+++..++.++.|++.|++||| +.+++||||||+||+++.++.+||+|||++......
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~--- 170 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 170 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccccc---
Confidence 999999999876542 4799999999999999999999 899999999999999999999999999999754322
Q ss_pred ccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhccCC
Q 038098 449 LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQ 527 (580)
Q Consensus 449 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 527 (580)
.....++..|+|||.+.+..++.++||||||+++|||+| |+.||...... .... .+...
T Consensus 171 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-----~~~~---------~~~~~---- 230 (278)
T 1byg_A 171 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVP---------RVEKG---- 230 (278)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-----GHHH---------HHTTT----
T ss_pred --ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHH---------HHhcC----
Confidence 123357889999999988899999999999999999998 99998653111 1110 01100
Q ss_pred cccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 038098 528 KDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDS 573 (580)
Q Consensus 528 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~ 573 (580)
.....+..++..+.+++.+||+.||++||++.|+++.|+++...
T Consensus 231 --~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 231 --YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 01122345678899999999999999999999999999998765
No 170
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=7.4e-42 Score=358.61 Aligned_cols=265 Identities=23% Similarity=0.227 Sum_probs=196.1
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecc--ccchhhhHHHHHHHHhhcCCCCcceEEeeeecC------C
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQ--YGRAFKSFDIECDMIKRIRHRNIIKIISSCSSD------D 361 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~ 361 (580)
.++|+..+.||+|+||.||+|... +|+.||||++... .......+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467999999999999999999855 6899999999654 233456788999999999999999999998654 3
Q ss_pred ceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccc
Q 038098 362 FKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 441 (580)
Q Consensus 362 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~ 441 (580)
..++||||+++ +|.+.+.. .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 56999999976 56665543 4899999999999999999999 89999999999999999999999999999986
Q ss_pred cCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcc--------
Q 038098 442 LLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLP-------- 513 (580)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~-------- 513 (580)
.... .......||+.|+|||.+.+..++.++||||+||++|||++|+.||.+.... ..+.......-.
T Consensus 214 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~-~~~~~i~~~lg~p~~~~~~~ 289 (464)
T 3ttj_A 214 AGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQLGTPCPEFMKK 289 (464)
T ss_dssp ---C---CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHHTT
T ss_pred cCCC---cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHHH
Confidence 5322 2334567999999999999999999999999999999999999999753211 011111110000
Q ss_pred --cchhhhcchhccCC------------cccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 514 --ISVMEIVDANLLSQ------------KDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 514 --~~~~~~~d~~~~~~------------~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
......++...... ...........+.++.+|+.+||..||++|||++|+++|
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000000000 000001112236789999999999999999999999986
No 171
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=7.2e-42 Score=348.80 Aligned_cols=276 Identities=21% Similarity=0.259 Sum_probs=205.4
Q ss_pred CHHHHHHHhcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccc-----------hhhhHHHHHHHHhhcCCCCcc
Q 038098 283 TYLEIFQATNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGR-----------AFKSFDIECDMIKRIRHRNII 351 (580)
Q Consensus 283 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv 351 (580)
...++....++|.+.+.||+|+||.||+|...+|+.||||++...... ..+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 345777888999999999999999999999888999999998543221 126788999999999999999
Q ss_pred eEEeeeec-----CCceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeC
Q 038098 352 KIISSCSS-----DDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD 426 (580)
Q Consensus 352 ~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~ 426 (580)
++++++.. ....++||||++ |+|.+++...+..+++..+..++.||+.||.||| +.+|+||||||+||+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~ 168 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLA 168 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEC
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEEc
Confidence 99999843 346799999997 5899988877778999999999999999999999 89999999999999999
Q ss_pred CCCcEEEccccCccccCCCCCcccccccccCCCcCCcccccC-CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHH
Q 038098 427 DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK 505 (580)
Q Consensus 427 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~ 505 (580)
.++.+||+|||+++..... .......+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||......+ ...
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~ 244 (362)
T 3pg1_A 169 DNNDITICDFNLAREDTAD---ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN-QLN 244 (362)
T ss_dssp TTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHH
T ss_pred CCCCEEEEecCcccccccc---cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH-HHH
Confidence 9999999999999754222 22344568999999998876 678999999999999999999999997632111 111
Q ss_pred HHHHhhccc-----------chhhhcchhccCCc-ccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 506 HWVNDLLPI-----------SVMEIVDANLLSQK-DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 506 ~~~~~~~~~-----------~~~~~~d~~~~~~~-~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
......... ...+.+........ ..........+..+.+|+.+||+.||++|||++|+++|
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 111100000 01111111111111 11112234456789999999999999999999999976
No 172
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=9.7e-42 Score=361.02 Aligned_cols=253 Identities=23% Similarity=0.338 Sum_probs=207.3
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc---cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY---GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
++|...+.||+|+||.||+|+.+ +|+.||+|++.... ......+..|++++++++||||+++++++...+..++||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 56888899999999999999975 69999999996542 234467888999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCC
Q 038098 368 EYMPHGSLEKCLYSSN---YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLK 444 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 444 (580)
||++||+|.+++.... ..+++..++.++.||+.||.||| +.+|+||||||+|||++.+|.+||+|||+++.+..
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 9999999999987643 46999999999999999999999 89999999999999999999999999999987643
Q ss_pred CCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhc
Q 038098 445 EDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANL 524 (580)
Q Consensus 445 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 524 (580)
... ......||+.|+|||++.+..++.++||||+||++|||+||+.||...... .....+... +...
T Consensus 342 ~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~-~~~~~~~~~--------i~~~-- 408 (543)
T 3c4z_A 342 GQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQR--------VLEQ-- 408 (543)
T ss_dssp TCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC-CCHHHHHHH--------HHHC--
T ss_pred CCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc-hhHHHHHHH--------Hhhc--
Confidence 322 223457999999999999999999999999999999999999999763211 111111111 1110
Q ss_pred cCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCH-----HHHHHH
Q 038098 525 LSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINA-----KEIVTR 566 (580)
Q Consensus 525 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~-----~ev~~~ 566 (580)
....+..++.++.+++.+||+.||++||++ +++++|
T Consensus 409 ------~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 409 ------AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp ------CCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred ------ccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 111224567789999999999999999965 667654
No 173
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3e-42 Score=350.96 Aligned_cols=245 Identities=26% Similarity=0.318 Sum_probs=193.3
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc---chhhhHHHHHHH-HhhcCCCCcceEEeeeecCCceee
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG---RAFKSFDIECDM-IKRIRHRNIIKIISSCSSDDFKAL 365 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~l 365 (580)
.++|...+.||+|+||.||+|+.+ +++.||+|++..... .....+..|..+ ++.++||||+++++++.+.+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357899999999999999999876 588999999975432 233455666666 567899999999999999999999
Q ss_pred EeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCC
Q 038098 366 VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE 445 (580)
Q Consensus 366 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 445 (580)
||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 117 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 999999999999987644 5889999999999999999999 999999999999999999999999999999854222
Q ss_pred CCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhcc
Q 038098 446 DQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLL 525 (580)
Q Consensus 446 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 525 (580)
. .......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ..... .+....
T Consensus 193 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~~~~--------~i~~~~-- 255 (373)
T 2r5t_A 193 N--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-----AEMYD--------NILNKP-- 255 (373)
T ss_dssp C--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH-----HHHHH--------HHHHSC--
T ss_pred C--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHHHH--------HHHhcc--
Confidence 2 233456799999999999999999999999999999999999999865211 11111 111110
Q ss_pred CCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHH
Q 038098 526 SQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKE 562 (580)
Q Consensus 526 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~e 562 (580)
...+..++.++.+|+.+||+.||++||++.+
T Consensus 256 ------~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 256 ------LQLKPNITNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp ------CCCCSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred ------cCCCCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence 1112345677899999999999999999853
No 174
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.4e-41 Score=346.38 Aligned_cols=256 Identities=26% Similarity=0.368 Sum_probs=206.5
Q ss_pred HHHHhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc--------chhhhHHHHHHHHhhc-CCCCcceEEee
Q 038098 287 IFQATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG--------RAFKSFDIECDMIKRI-RHRNIIKIISS 356 (580)
Q Consensus 287 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l-~h~niv~~~~~ 356 (580)
.....++|.+.+.||+|+||.||+|... +|+.||||++..... .....+..|+++++++ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 3444567999999999999999999975 799999999865432 1245678899999999 79999999999
Q ss_pred eecCCceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccc
Q 038098 357 CSSDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDF 436 (580)
Q Consensus 357 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Df 436 (580)
+...+..++||||+++++|.+++... ..+++..+..++.||+.||.||| +.+|+|+||||+||+++.++.+||+||
T Consensus 169 ~~~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~Df 244 (365)
T 2y7j_A 169 YESSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDF 244 (365)
T ss_dssp EEBSSEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCC
T ss_pred EeeCCEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEec
Confidence 99999999999999999999998754 35899999999999999999999 899999999999999999999999999
Q ss_pred cCccccCCCCCcccccccccCCCcCCcccccC------CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHh
Q 038098 437 GMAKPLLKEDQSLTQTQTLATIGYMAPEYGRE------GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVND 510 (580)
Q Consensus 437 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~ 510 (580)
|++..+.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .......
T Consensus 245 G~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~--~~~~~~i-- 317 (365)
T 2y7j_A 245 GFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ--ILMLRMI-- 317 (365)
T ss_dssp TTCEECCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH--
T ss_pred CcccccCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH--HHHHHHH--
Confidence 9998664322 2334579999999998753 3588999999999999999999999865211 0010000
Q ss_pred hcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 511 LLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 511 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.. .........+..++.++.+++.+||+.||++||+++|+++|
T Consensus 318 ---------~~----~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 318 ---------ME----GQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp ---------HH----TCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ---------Hh----CCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00 00101111223456779999999999999999999999875
No 175
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.8e-42 Score=346.49 Aligned_cols=272 Identities=24% Similarity=0.278 Sum_probs=201.9
Q ss_pred HHHhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc-----chhhhHHHHHHHHhhcCCCCcceEEeeeecCC
Q 038098 288 FQATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG-----RAFKSFDIECDMIKRIRHRNIIKIISSCSSDD 361 (580)
Q Consensus 288 ~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 361 (580)
....++|...+.||+|+||.||+|... +|+.||||++..... .....+.+|++++++++||||+++++++...+
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 344578999999999999999999865 689999999864321 12356788999999999999999999999999
Q ss_pred ceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccc
Q 038098 362 FKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 441 (580)
Q Consensus 362 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~ 441 (580)
..++||||+++ +|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 86 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 86 NISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp CCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred ceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 99999999986 899988877777999999999999999999999 89999999999999999999999999999986
Q ss_pred cCCCCCcccccccccCCCcCCcccccCC-CCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccc---hh
Q 038098 442 LLKEDQSLTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPIS---VM 517 (580)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~ 517 (580)
+.... .......+|+.|+|||.+.+. .++.++||||+||++|||++|.+||...... ..+........... ..
T Consensus 162 ~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~ 238 (346)
T 1ua2_A 162 FGSPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIFETLGTPTEEQWP 238 (346)
T ss_dssp TTSCC--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTSS
T ss_pred ccCCc--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHcCCCChhhhh
Confidence 64322 223445789999999998654 5789999999999999999999998653211 11111111110000 00
Q ss_pred h---hcchhccCCc--ccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 518 E---IVDANLLSQK--DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 518 ~---~~d~~~~~~~--~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
. ..+....... .........++.++.+|+.+||+.||++|||++|+++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 239 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp STTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0 0000000000 00001123456889999999999999999999999876
No 176
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.1e-41 Score=361.34 Aligned_cols=251 Identities=22% Similarity=0.301 Sum_probs=200.9
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
.++|+..+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+.+++.++||||+++++++......++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 346889999999999999999875 68999999996542 334577889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCC---CcEEEccccCccccCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN---MVAHLSDFGMAKPLLK 444 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~---~~~kl~Dfg~a~~~~~ 444 (580)
||+++|+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.. +.+||+|||+++....
T Consensus 116 e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 116 ECYKGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp ECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred ecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 999999999988654 35899999999999999999999 8999999999999999764 4599999999986643
Q ss_pred CCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhc
Q 038098 445 EDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANL 524 (580)
Q Consensus 445 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 524 (580)
.. ......||+.|+|||.+. +.++.++||||+||++|||++|+.||..... ..... .+ .
T Consensus 192 ~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~--------~i-~--- 250 (494)
T 3lij_A 192 QK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD-----QEILR--------KV-E--- 250 (494)
T ss_dssp TB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH--------HH-H---
T ss_pred Cc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHH--------HH-H---
Confidence 22 234457999999999876 5799999999999999999999999875311 11111 00 0
Q ss_pred cCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 525 LSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 525 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
..........+..++.++.+++.+||+.||++|||+.|+++|
T Consensus 251 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 251 KGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp HTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred hCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 011111112234567789999999999999999999999986
No 177
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.1e-42 Score=371.82 Aligned_cols=256 Identities=24% Similarity=0.411 Sum_probs=210.8
Q ss_pred hcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeecc
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEYM 370 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 370 (580)
.++|.+.+.||+|+||.||+|.+.++..||||++.... ...+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 45688889999999999999999888889999997543 234678999999999999999999999876 6789999999
Q ss_pred CCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCcc
Q 038098 371 PHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSL 449 (580)
Q Consensus 371 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 449 (580)
++|+|.+++... +..+++..++.++.||++||+||| +.+|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~ 419 (535)
T 2h8h_A 344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YT 419 (535)
T ss_dssp TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-HH
T ss_pred cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-ee
Confidence 999999999753 245899999999999999999999 8999999999999999999999999999998653221 11
Q ss_pred cccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhccCCc
Q 038098 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQK 528 (580)
Q Consensus 450 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 528 (580)
......++..|+|||.+..+.++.++|||||||++|||+| |+.||..... .+.. +.+...
T Consensus 420 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~-----~~~~---------~~i~~~----- 480 (535)
T 2h8h_A 420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-----REVL---------DQVERG----- 480 (535)
T ss_dssp TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH-----HHHH---------HHHHTT-----
T ss_pred cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHH---------HHHHcC-----
Confidence 2233456788999999998999999999999999999999 9999865311 1111 111110
Q ss_pred ccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 038098 529 DEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRD 572 (580)
Q Consensus 529 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~ 572 (580)
.+...+..++.++.+||.+||+.||++||++++|++.|+++..
T Consensus 481 -~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 481 -YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred -CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 1122334677889999999999999999999999999987643
No 178
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=4.1e-42 Score=338.28 Aligned_cols=255 Identities=26% Similarity=0.411 Sum_probs=206.5
Q ss_pred HhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeec---------
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSS--------- 359 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--------- 359 (580)
...+|+..+.||+|+||.||+|... +|+.||+|++.... ..+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3456889999999999999999976 79999999986442 456789999999999999999998854
Q ss_pred -------CCceeeEeeccCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcE
Q 038098 360 -------DDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVA 431 (580)
Q Consensus 360 -------~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~ 431 (580)
....++||||+++|+|.+++.... ..+++..++.++.||+.||.||| +.+|+||||||+||+++.++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCE
Confidence 445799999999999999997543 56999999999999999999999 8999999999999999999999
Q ss_pred EEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhh
Q 038098 432 HLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511 (580)
Q Consensus 432 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~ 511 (580)
||+|||++....... ......+|+.|+|||.+.+..++.++||||||+++|||++|..|+... ..+..
T Consensus 162 kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-------~~~~~-- 229 (284)
T 2a19_B 162 KIGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-------SKFFT-- 229 (284)
T ss_dssp EECCCTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-------HHHHH--
T ss_pred EECcchhheeccccc---cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-------HHHHH--
Confidence 999999998664332 223456899999999999889999999999999999999999885321 01111
Q ss_pred cccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhhhc
Q 038098 512 LPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLKNVK 579 (580)
Q Consensus 512 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~~~~~ 579 (580)
...+.. .+..++.++.+++.+||+.||++||++.|++++|+.+.+...++.+
T Consensus 230 ------~~~~~~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~~~ 281 (284)
T 2a19_B 230 ------DLRDGI----------ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKNER 281 (284)
T ss_dssp ------HHHTTC----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-------
T ss_pred ------Hhhccc----------ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCcccc
Confidence 000000 1123456788999999999999999999999999999877665543
No 179
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.7e-42 Score=345.36 Aligned_cols=258 Identities=24% Similarity=0.283 Sum_probs=191.7
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcC-CCCcceEEeeee--------cC
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIR-HRNIIKIISSCS--------SD 360 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~--------~~ 360 (580)
..+|++.+.||+|+||.||+|++. +|+.||||++..........+..|+.++.++. ||||+++++++. ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 356888999999999999999865 78999999986665555677889999999996 999999999983 34
Q ss_pred CceeeEeeccCCCChHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEEecCCCCCEEeCCCCcEEEccc
Q 038098 361 DFKALVLEYMPHGSLEKCLYS--SNYILDIFQRLNIMIDVASALEYLHFGYSVP--IIHCDLKPSNVLLDDNMVAHLSDF 436 (580)
Q Consensus 361 ~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~--i~H~dlk~~Nill~~~~~~kl~Df 436 (580)
...++||||++ |+|.+++.. ....+++..++.++.||+.||+||| +.+ |+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecC
Confidence 45789999996 699998865 3456999999999999999999999 888 999999999999999999999999
Q ss_pred cCccccCCCCCcc----------cccccccCCCcCCcccc---cCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCch
Q 038098 437 GMAKPLLKEDQSL----------TQTQTLATIGYMAPEYG---REGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMT 503 (580)
Q Consensus 437 g~a~~~~~~~~~~----------~~~~~~~~~~y~aPE~~---~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~ 503 (580)
|+++......... ......||+.|+|||.+ .+..++.++|||||||++|||+||+.||......
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--- 259 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL--- 259 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH---
Confidence 9998664322211 11244589999999988 5667899999999999999999999998642110
Q ss_pred HHHHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038098 504 LKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLL 575 (580)
Q Consensus 504 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~ 575 (580)
.+...... .......+..+.+++.+||+.||++||+++|++++|+++.....
T Consensus 260 --------------~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 260 --------------RIVNGKYS------IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp --------------------CC------CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred --------------HhhcCccc------CCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 01111100 01112233457899999999999999999999999999987543
No 180
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=6.4e-42 Score=338.71 Aligned_cols=249 Identities=20% Similarity=0.298 Sum_probs=206.6
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc---cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeE
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY---GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALV 366 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 366 (580)
.++|...+.||+|+||.||+|... +++.||+|++.... ....+.+..|+.++++++||||+++++++...+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 356888999999999999999876 58899999986542 23456788899999999999999999999999999999
Q ss_pred eeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCC
Q 038098 367 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED 446 (580)
Q Consensus 367 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 446 (580)
|||+++++|.+++... ..+++..++.++.|+++|++||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 94 ~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 94 LELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EECCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 9999999999987654 35899999999999999999999 8999999999999999999999999999998664322
Q ss_pred CcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccC
Q 038098 447 QSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLS 526 (580)
Q Consensus 447 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 526 (580)
. ......||..|+|||.+.+..++.++||||+|+++|||++|+.||..... ..... .+...
T Consensus 170 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~--------~~~~~---- 230 (294)
T 2rku_A 170 E--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-----KETYL--------RIKKN---- 230 (294)
T ss_dssp C--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHH--------HHHTT----
T ss_pred c--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHH--------HHhhc----
Confidence 2 23345689999999999988899999999999999999999999865311 11100 00000
Q ss_pred CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 527 QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 527 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
....+..++..+.+++.+||+.||++||+++|++++
T Consensus 231 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 231 ----EYSIPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp ----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ----cCCCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 111223456778999999999999999999999886
No 181
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=5.9e-42 Score=363.04 Aligned_cols=251 Identities=23% Similarity=0.330 Sum_probs=207.0
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc---cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeE
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY---GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALV 366 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 366 (580)
.++|...+.||+|+||.||+|... +|+.||||++.... ......+.+|++++++++||||+++++++...+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 356889999999999999999875 79999999996542 33457788999999999999999999999999999999
Q ss_pred eeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEe---CCCCcEEEccccCccccC
Q 038098 367 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLL 443 (580)
Q Consensus 367 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill---~~~~~~kl~Dfg~a~~~~ 443 (580)
|||+.+|+|.+++...+ .+++..+..++.||+.||.||| +.+|+||||||+||++ +.++.+||+|||+++.+.
T Consensus 105 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp ECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 99999999999887654 5899999999999999999999 8999999999999999 567899999999998663
Q ss_pred CCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchh
Q 038098 444 KEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDAN 523 (580)
Q Consensus 444 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 523 (580)
... ......||+.|+|||.+.+ .++.++||||+||++|||++|++||..... ...... +
T Consensus 181 ~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~-----------i---- 239 (484)
T 3nyv_A 181 ASK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE--YDILKK-----------V---- 239 (484)
T ss_dssp CCC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHH-----------H----
T ss_pred ccc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH--HHHHHH-----------H----
Confidence 322 2344569999999998865 789999999999999999999999975311 011110 1
Q ss_pred ccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 524 LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.........+.+..++.++.+|+.+||+.||++|||++|+++|
T Consensus 240 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 240 EKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp HHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 0111111223345677889999999999999999999999986
No 182
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=9.3e-42 Score=335.80 Aligned_cols=246 Identities=24% Similarity=0.328 Sum_probs=205.4
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc---cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY---GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
++|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 57889999999999999999865 67889999986432 233467889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 447 (580)
||+++|+|.+++...+ .+++..++.++.||++|+.||| +.+++||||||+||+++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~-- 167 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-- 167 (284)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS--
T ss_pred EeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCccc--
Confidence 9999999999987654 5899999999999999999999 999999999999999999999999999999755322
Q ss_pred cccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCC
Q 038098 448 SLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQ 527 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 527 (580)
......|+..|+|||.+.+..++.++||||+|+++|||++|+.||..... ..... .+...
T Consensus 168 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~--------~~~~~----- 227 (284)
T 2vgo_A 168 --RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH-----TETHR--------RIVNV----- 227 (284)
T ss_dssp --CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHH--------HHHTT-----
T ss_pred --ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH-----hHHHH--------HHhcc-----
Confidence 22345689999999999998999999999999999999999999865211 11111 11110
Q ss_pred cccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 528 KDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 528 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
....+...+.++.+++.+||+.||++||+++|+++|
T Consensus 228 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 228 ---DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp ---CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred ---ccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 011223456778999999999999999999999986
No 183
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-41 Score=347.39 Aligned_cols=263 Identities=25% Similarity=0.302 Sum_probs=197.4
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecCC------
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDD------ 361 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 361 (580)
.++|...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 467899999999999999999864 79999999985432 223467889999999999999999999987653
Q ss_pred ceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccc
Q 038098 362 FKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 441 (580)
Q Consensus 362 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~ 441 (580)
..++||||+ +++|.+++.. ..+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 459999999 7899999876 35899999999999999999999 99999999999999999999999999999986
Q ss_pred cCCCCCcccccccccCCCcCCcccccC-CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhh--cccch--
Q 038098 442 LLKEDQSLTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL--LPISV-- 516 (580)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~--~~~~~-- 516 (580)
.... .....+|..|+|||.+.+ ..++.++||||+||++|||++|+.||.+.... ..+....... .+...
T Consensus 178 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~~~~~~~~ 251 (367)
T 1cm8_A 178 ADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIMKVTGTPPAEFVQ 251 (367)
T ss_dssp CCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHH
T ss_pred cccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHH
Confidence 5322 234578999999998877 67999999999999999999999999753211 0111111100 00000
Q ss_pred -------hhhcchhccCC-cccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 517 -------MEIVDANLLSQ-KDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 517 -------~~~~d~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
...+.. +... ..........++.++.+|+.+||..||++|||++|+++|
T Consensus 252 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 252 RLQSDEAKNYMKG-LPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp TCSCHHHHHHHHH-SCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HhhhHHHHHHHHh-CCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000000 0000 111111224567889999999999999999999999986
No 184
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2e-41 Score=360.40 Aligned_cols=252 Identities=22% Similarity=0.295 Sum_probs=203.6
Q ss_pred HhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc-------------chhhhHHHHHHHHhhcCCCCcceEEe
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG-------------RAFKSFDIECDMIKRIRHRNIIKIIS 355 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~~~~ 355 (580)
..++|.+.+.||+|+||+||+|... +++.||+|++..... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3577999999999999999999865 688999999864321 23467889999999999999999999
Q ss_pred eeecCCceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCC---cEE
Q 038098 356 SCSSDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM---VAH 432 (580)
Q Consensus 356 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~---~~k 432 (580)
++.+....++||||+++|+|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+||+++.++ .+|
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEE
Confidence 9999999999999999999999887643 5999999999999999999999 89999999999999998776 699
Q ss_pred EccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhc
Q 038098 433 LSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLL 512 (580)
Q Consensus 433 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 512 (580)
|+|||+++...... ......||+.|+|||.+. +.++.++||||+||++|+|++|+.||..... .....
T Consensus 190 l~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~--- 257 (504)
T 3q5i_A 190 IVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND-----QDIIK--- 257 (504)
T ss_dssp ECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH---
T ss_pred EEECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHH---
Confidence 99999998664322 234456999999999886 5689999999999999999999999875311 11111
Q ss_pred ccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 513 PISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 513 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.............+..++.++.+|+.+||+.||++|||++|+++|
T Consensus 258 ---------~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 258 ---------KVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp ---------HHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---------HHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 101111111122334567889999999999999999999999876
No 185
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3e-41 Score=339.70 Aligned_cols=263 Identities=21% Similarity=0.274 Sum_probs=202.8
Q ss_pred hcCCCcCceeccccCceEEEEEe-CCCCEEEEEEEeccccchhhhHHHHHHHHhhcC-CCCcceEEeeeec--CCceeeE
Q 038098 291 TNGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIR-HRNIIKIISSCSS--DDFKALV 366 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~--~~~~~lv 366 (580)
.++|++.+.||+|+||.||+|.. .+++.||||++... ..+.+.+|++++++++ ||||+++++++.. ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 36688999999999999999985 47899999998633 3467889999999997 9999999999987 6678999
Q ss_pred eeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCC-cEEEccccCccccCCC
Q 038098 367 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM-VAHLSDFGMAKPLLKE 445 (580)
Q Consensus 367 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~-~~kl~Dfg~a~~~~~~ 445 (580)
|||+++++|.+++.. +++..+..++.||+.||+||| +.+|+||||||+||+++.++ .+||+|||+++.....
T Consensus 112 ~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp EECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred EeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 999999999998753 889999999999999999999 99999999999999999776 8999999999865432
Q ss_pred CCcccccccccCCCcCCcccccC-CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchh-
Q 038098 446 DQSLTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDAN- 523 (580)
Q Consensus 446 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~- 523 (580)
. ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||.........+.............+.++..
T Consensus 185 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 261 (330)
T 3nsz_A 185 Q---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261 (330)
T ss_dssp C---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred C---ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhc
Confidence 2 2234568999999999877 6789999999999999999999999854222111121111111111111111110
Q ss_pred --------------ccCCcc--cccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 524 --------------LLSQKD--EHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 524 --------------~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
...... ........++.++.+|+.+||+.||++|||++|+++|
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000000 0011123367889999999999999999999999985
No 186
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.9e-42 Score=354.74 Aligned_cols=252 Identities=15% Similarity=0.159 Sum_probs=196.3
Q ss_pred hcCCCcCceeccccCceEEEEEe-CCCCEEEEEEEecc---ccchhhhHHHHH---HHHhhcCCCCcceEE-------ee
Q 038098 291 TNGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFDLQ---YGRAFKSFDIEC---DMIKRIRHRNIIKII-------SS 356 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~---~~l~~l~h~niv~~~-------~~ 356 (580)
.++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+ +.+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 35688889999999999999995 46999999999743 234557788999 555566899999998 55
Q ss_pred eecCC-----------------ceeeEeeccCCCChHHHhhcCCC------CCCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 038098 357 CSSDD-----------------FKALVLEYMPHGSLEKCLYSSNY------ILDIFQRLNIMIDVASALEYLHFGYSVPI 413 (580)
Q Consensus 357 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~------~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i 413 (580)
+..++ ..++||||+ +|+|.+++...+. .+++..++.++.||+.||+||| +.+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 55443 278999999 6799999876432 2346888999999999999999 8999
Q ss_pred EEecCCCCCEEeCCCCcEEEccccCccccCCCCCcccccccccCCCcCCcccccCC-----------CCCCchhhHhHHH
Q 038098 414 IHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG-----------QVSTNGDVYSFGI 482 (580)
Q Consensus 414 ~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----------~~~~~~Dvws~Gv 482 (580)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 9999999999999999999999999985321 2334457 999999999877 8999999999999
Q ss_pred HHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHH
Q 038098 483 MLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKE 562 (580)
Q Consensus 483 il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~e 562 (580)
++|||+||+.||....... ....+. .....++.++.+++.+||+.||++||++.|
T Consensus 302 il~elltg~~Pf~~~~~~~-------------~~~~~~------------~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e 356 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALG-------------GSEWIF------------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQ 356 (377)
T ss_dssp HHHHHHHSSCCC------C-------------CSGGGG------------SSCCCCCHHHHHHHHHHTCSSGGGCCCHHH
T ss_pred HHHHHHHCCCCCccccccc-------------chhhhh------------hhccCCCHHHHHHHHHHcCCCchhCCCHHH
Confidence 9999999999986521110 000000 011345677899999999999999999999
Q ss_pred HHH--HHHHHHHHHHhh
Q 038098 563 IVT--RLLKIRDSLLKN 577 (580)
Q Consensus 563 v~~--~L~~~~~~~~~~ 577 (580)
+++ .++++.+.....
T Consensus 357 ~l~hp~f~~~~~~~~~~ 373 (377)
T 3byv_A 357 AMETPEYEQLRTELSAA 373 (377)
T ss_dssp HHTSHHHHHHHHHHHHH
T ss_pred HhhChHHHHHHHHHHHh
Confidence 997 456666555443
No 187
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2.5e-41 Score=343.31 Aligned_cols=270 Identities=23% Similarity=0.322 Sum_probs=203.5
Q ss_pred hcCCCcCceeccccCceEEEEEe-CCCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeec--------
Q 038098 291 TNGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSS-------- 359 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-------- 359 (580)
.++|++.+.||+|+||.||+|+. .+|+.||||++.... ......+.+|++++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 36789999999999999999987 478999999985443 2234577889999999999999999999876
Q ss_pred CCceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCc
Q 038098 360 DDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMA 439 (580)
Q Consensus 360 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a 439 (580)
.+..++||||+++ +|.+.+......+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 3468999999975 888888777677999999999999999999999 899999999999999999999999999999
Q ss_pred cccCCCC--CcccccccccCCCcCCcccccC-CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhc---c
Q 038098 440 KPLLKED--QSLTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLL---P 513 (580)
Q Consensus 440 ~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~---~ 513 (580)
+.+.... .........||+.|+|||.+.+ ..++.++||||+||++|||+||+.||...... .......... +
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ--HQLALISQLCGSIT 249 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCC
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCC
Confidence 8664322 1222345578999999998876 45799999999999999999999999763211 1111111110 0
Q ss_pred cc-hhhhcchhccCC----cccccchh-----hhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 514 IS-VMEIVDANLLSQ----KDEHFTTK-----GQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 514 ~~-~~~~~d~~~~~~----~~~~~~~~-----~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.. .....+...... ........ ...++++.+|+.+||+.||++|||++|+++|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 00 111100000000 00000000 1124668899999999999999999999986
No 188
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=6.4e-41 Score=351.54 Aligned_cols=265 Identities=19% Similarity=0.217 Sum_probs=212.0
Q ss_pred hcCCCcCceeccccCceEEEEEe-CCCCEEEEEEEeccccchhhhHHHHHHHHhhcCC-CCcceEEeeeecCCceeeEee
Q 038098 291 TNGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRH-RNIIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e 368 (580)
.++|.+.+.||+|+||.||+|.. .+++.||||++.... ....+..|+++++.++| +++..+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 46799999999999999999986 478999999986543 23568899999999987 556666666777888899999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEe---CCCCcEEEccccCccccCCC
Q 038098 369 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLLKE 445 (580)
Q Consensus 369 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill---~~~~~~kl~Dfg~a~~~~~~ 445 (580)
|+ +++|.+++......+++..++.++.||+.||+||| +.+|+||||||+|||+ +.++.+||+|||+++.+...
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99 89999999877778999999999999999999999 8999999999999999 68899999999999876443
Q ss_pred CCc-----ccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhc
Q 038098 446 DQS-----LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIV 520 (580)
Q Consensus 446 ~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (580)
... .......||..|+|||.+.+..++.++|||||||++|||++|+.||........ ...+.. +.
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~--~~~~~~--------i~ 229 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK--KQKYEK--------IS 229 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH--HHHHHH--------HH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH--HHHHHH--------Hh
Confidence 321 112356799999999999999999999999999999999999999976432211 111110 00
Q ss_pred chhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 038098 521 DANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574 (580)
Q Consensus 521 d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~ 574 (580)
....... .......++.++.+++.+||+.||++||++++|++.|+++....
T Consensus 230 ~~~~~~~---~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 230 EKKVATS---IEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp HHHHHSC---HHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred hcccccc---HHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 1000000 00112345678999999999999999999999999999987653
No 189
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=5.6e-42 Score=338.57 Aligned_cols=260 Identities=25% Similarity=0.374 Sum_probs=200.8
Q ss_pred cCCCcCceeccccCceEEEEEeC--CCC--EEEEEEEecc---ccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCcee
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ--DGM--EVAVKVFDLQ---YGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKA 364 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~--~~~--~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 364 (580)
++|++.+.||+|+||.||+|.+. +++ .||+|++... .....+.+.+|++++++++||||+++++++.... .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 56888999999999999999853 333 6899998644 2344577889999999999999999999998765 78
Q ss_pred eEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCC
Q 038098 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLK 444 (580)
Q Consensus 365 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 444 (580)
+|+||+++|+|.+++......+++..++.++.||++||.||| +.+++||||||+||+++.++.+||+|||++.....
T Consensus 97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999999999877667999999999999999999999 89999999999999999999999999999987644
Q ss_pred CCCcc-cccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcch
Q 038098 445 EDQSL-TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDA 522 (580)
Q Consensus 445 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 522 (580)
..... ......+|..|+|||.+.+..++.++||||||+++|||++ |+.||..... ...... +...
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~--------~~~~ 240 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-----SQILHK--------IDKE 240 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHH--------HHTS
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH-----HHHHHH--------HHcc
Confidence 33221 2234457788999999988889999999999999999999 9999865311 111110 0000
Q ss_pred hccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 038098 523 NLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574 (580)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~ 574 (580)
......+..++.++.+++.+||+.||++||++.+++++|+++...-
T Consensus 241 ------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 241 ------GERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp ------CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred ------CCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 0111223456788999999999999999999999999999886543
No 190
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.7e-41 Score=335.90 Aligned_cols=251 Identities=25% Similarity=0.365 Sum_probs=200.2
Q ss_pred CCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeeccC
Q 038098 293 GFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEYMP 371 (580)
Q Consensus 293 ~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 371 (580)
+|.....||+|+||.||+|... +++.||+|.+..........+..|+.+++.++||||+++++++...+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 3555569999999999999864 688999999976655566788999999999999999999999999999999999999
Q ss_pred CCChHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCC-CCcEEEccccCccccCCCCCc
Q 038098 372 HGSLEKCLYSSN--YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD-NMVAHLSDFGMAKPLLKEDQS 448 (580)
Q Consensus 372 ~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~-~~~~kl~Dfg~a~~~~~~~~~ 448 (580)
+++|.+++.... ..+++..+..++.||+.||+||| +.+++||||||+||+++. ++.+||+|||++.......
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-- 177 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-- 177 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC--
Confidence 999999988654 35678999999999999999999 899999999999999987 8999999999998653322
Q ss_pred ccccccccCCCcCCcccccCCC--CCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccC
Q 038098 449 LTQTQTLATIGYMAPEYGREGQ--VSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLS 526 (580)
Q Consensus 449 ~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 526 (580)
.......|+..|+|||.+.+.. ++.++||||||+++|||++|+.||...... ....+.. ....
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~-------------~~~~ 242 (295)
T 2clq_A 178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP--QAAMFKV-------------GMFK 242 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH--HHHHHHH-------------HHHC
T ss_pred CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch--hHHHHhh-------------cccc
Confidence 1223456899999999987643 789999999999999999999998642111 1100000 0000
Q ss_pred CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 527 QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 527 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
. ....+..++.++.+++.+||+.||++||+++|++++
T Consensus 243 ~---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 243 V---HPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp C---CCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred c---cccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 111234567789999999999999999999999875
No 191
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.8e-41 Score=340.54 Aligned_cols=255 Identities=20% Similarity=0.277 Sum_probs=203.3
Q ss_pred HHhcCCCcC-ceeccccCceEEEEEeC-CCCEEEEEEEeccc--cchhhhHHHHHHHHhhcC-CCCcceEEeeeecCCce
Q 038098 289 QATNGFSEN-NLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIR-HRNIIKIISSCSSDDFK 363 (580)
Q Consensus 289 ~~~~~~~~~-~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~ 363 (580)
...+.|.+. +.||+|+||.||+|... +|+.||+|++.... ......+..|+.++.++. ||||+++++++...+..
T Consensus 25 ~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~ 104 (327)
T 3lm5_A 25 NFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEI 104 (327)
T ss_dssp HHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred hhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeE
Confidence 344567776 88999999999999865 68999999996543 233567889999999995 69999999999999999
Q ss_pred eeEeeccCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCC---CCcEEEccccCc
Q 038098 364 ALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMA 439 (580)
Q Consensus 364 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~---~~~~kl~Dfg~a 439 (580)
++||||+++|+|.+++... ...+++..++.++.||+.||+||| +.+|+||||||+||+++. ++.+||+|||++
T Consensus 105 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a 181 (327)
T 3lm5_A 105 ILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMS 181 (327)
T ss_dssp EEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCGGGC
T ss_pred EEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeCccc
Confidence 9999999999999988654 356999999999999999999999 899999999999999987 789999999999
Q ss_pred cccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhh
Q 038098 440 KPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEI 519 (580)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (580)
+...... ......||+.|+|||.+.+..++.++||||+||++|||++|+.||...... ..+. .+
T Consensus 182 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~---------~i 245 (327)
T 3lm5_A 182 RKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ----ETYL---------NI 245 (327)
T ss_dssp EEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH---------HH
T ss_pred cccCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch----HHHH---------HH
Confidence 8663322 223456999999999999999999999999999999999999998653111 0000 00
Q ss_pred cchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 520 VDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 520 ~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
... ...........++..+.+++.+||+.||++|||++|+++|
T Consensus 246 ~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 246 SQV----NVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHT----CCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred Hhc----ccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 000 0111112234567789999999999999999999999876
No 192
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.6e-41 Score=337.43 Aligned_cols=249 Identities=27% Similarity=0.380 Sum_probs=207.2
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeec
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEY 369 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 369 (580)
+.|...+.||+|+||.||+|... +++.||+|++.... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 56888999999999999999864 68999999997553 34457889999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCcc
Q 038098 370 MPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSL 449 (580)
Q Consensus 370 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 449 (580)
+++++|.+++.. ..+++..++.++.|++.||.||| +.+++||||||+||+++.++.+||+|||++....... .
T Consensus 102 ~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 174 (303)
T 3a7i_A 102 LGGGSALDLLEP--GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--I 174 (303)
T ss_dssp CTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB--C
T ss_pred CCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCccc--c
Confidence 999999999865 45899999999999999999999 8999999999999999999999999999998664322 1
Q ss_pred cccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCCcc
Q 038098 450 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKD 529 (580)
Q Consensus 450 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 529 (580)
......|+..|+|||.+.+..++.++||||||+++|||++|+.||..... ........ ...
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~------------~~~----- 235 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP--MKVLFLIP------------KNN----- 235 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHH------------HSC-----
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH--HHHHHHhh------------cCC-----
Confidence 23345689999999999999999999999999999999999999865311 00111100 000
Q ss_pred cccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 038098 530 EHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567 (580)
Q Consensus 530 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L 567 (580)
.......++..+.+++.+||+.||++||++.|++++.
T Consensus 236 -~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 236 -PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp -CCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred -CCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 0011234567799999999999999999999999874
No 193
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=7.4e-42 Score=344.63 Aligned_cols=249 Identities=20% Similarity=0.298 Sum_probs=206.4
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc---cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeE
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY---GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALV 366 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 366 (580)
.++|...+.||+|+||.||+|... +++.||+|++.... ....+.+..|+.++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 357888999999999999999875 58899999986542 23456788899999999999999999999999999999
Q ss_pred eeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCC
Q 038098 367 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED 446 (580)
Q Consensus 367 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 446 (580)
|||+++++|.+++... ..+++..++.++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 120 ~e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 120 LELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp ECCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 9999999999987654 45899999999999999999999 8999999999999999999999999999998664322
Q ss_pred CcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccC
Q 038098 447 QSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLS 526 (580)
Q Consensus 447 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 526 (580)
. ......||..|+|||.+.+..++.++||||||+++|||++|+.||..... ..... .+...
T Consensus 196 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~--------~~~~~---- 256 (335)
T 2owb_A 196 E--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-----KETYL--------RIKKN---- 256 (335)
T ss_dssp C--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHH--------HHHHT----
T ss_pred c--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH-----HHHHH--------HHhcC----
Confidence 2 23345689999999999988899999999999999999999999865211 11100 00000
Q ss_pred CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 527 QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 527 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
....+..++.++.+++.+||+.||++||+++|++++
T Consensus 257 ----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 257 ----EYSIPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp ----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ----CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 011223456778999999999999999999999875
No 194
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=9.5e-42 Score=370.50 Aligned_cols=252 Identities=25% Similarity=0.376 Sum_probs=202.7
Q ss_pred ceeccccCceEEEEEeC---CCCEEEEEEEecccc--chhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeeccCC
Q 038098 298 NLIGRGGFGSVYKARIQ---DGMEVAVKVFDLQYG--RAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEYMPH 372 (580)
Q Consensus 298 ~~lg~G~~g~v~~~~~~---~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 372 (580)
+.||+|+||.||+|.+. +++.||||+++.... ...+.+.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999653 467899999975432 335789999999999999999999999975 457899999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCC-cccc
Q 038098 373 GSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ-SLTQ 451 (580)
Q Consensus 373 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~ 451 (580)
|+|.+++... ..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.+..... ....
T Consensus 454 g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 9999999754 45899999999999999999999 89999999999999999999999999999987644332 1223
Q ss_pred cccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhccCCccc
Q 038098 452 TQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDE 530 (580)
Q Consensus 452 ~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 530 (580)
....+|+.|+|||++.+..++.++|||||||++|||+| |+.||...... .. ...+... .
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~------------~~~i~~~------~ 589 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EV------------TAMLEKG------E 589 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HH------------HHHHHTT------C
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HH------------HHHHHcC------C
Confidence 34457788999999999999999999999999999999 99998653211 11 1111111 1
Q ss_pred ccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 038098 531 HFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574 (580)
Q Consensus 531 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~ 574 (580)
+...+..++.++.+++.+||+.||++||++++|++.|+++..++
T Consensus 590 ~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l 633 (635)
T 4fl3_A 590 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 633 (635)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 12234467788999999999999999999999999999988765
No 195
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.1e-41 Score=342.98 Aligned_cols=269 Identities=25% Similarity=0.333 Sum_probs=201.8
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc--chhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG--RAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
.++|+..+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 467888999999999999999875 589999999865432 23456778999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 447 (580)
||+++++|.++.... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 104 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 104 EFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp ECCSEEHHHHHHHST-TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecCCcchHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 999999888876543 45999999999999999999999 89999999999999999999999999999986533222
Q ss_pred cccccccccCCCcCCcccccCC-CCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhc--ccchhhhcch--
Q 038098 448 SLTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLL--PISVMEIVDA-- 522 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~-- 522 (580)
......||..|+|||.+.+. .++.++||||+||++|||++|+.||......+ .......... ..........
T Consensus 180 --~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 180 --VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHHHHHHCG
T ss_pred --ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhhhHhhhcc
Confidence 23345689999999998765 78999999999999999999999987632111 1111111000 0000000000
Q ss_pred ----hccC---CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 523 ----NLLS---QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 523 ----~~~~---~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.... ...........++.++.+|+.+||+.||++|||++|+++|
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000 0001111223567889999999999999999999999986
No 196
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=6.6e-42 Score=348.77 Aligned_cols=266 Identities=23% Similarity=0.348 Sum_probs=206.5
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEeec
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLEY 369 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 369 (580)
++|+..+.||+|+||.||+|... +|+.||+|++.... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 56888999999999999999876 78999999997553 23456788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCc
Q 038098 370 MPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV-PIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQS 448 (580)
Q Consensus 370 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~-~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 448 (580)
+++|+|.+++...+ .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||++......
T Consensus 113 ~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 185 (360)
T 3eqc_A 113 MDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 185 (360)
T ss_dssp CTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---
T ss_pred CCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc---
Confidence 99999999987654 5899999999999999999999 75 8999999999999999999999999999754221
Q ss_pred ccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHH-----------------------
Q 038098 449 LTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLK----------------------- 505 (580)
Q Consensus 449 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~----------------------- 505 (580)
......||+.|+|||.+.+..++.++|||||||++|||+||+.||......+....
T Consensus 186 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (360)
T 3eqc_A 186 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 264 (360)
T ss_dssp -C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------
T ss_pred -cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcc
Confidence 22345689999999999999999999999999999999999999975321110000
Q ss_pred -HHH-HhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 038098 506 -HWV-NDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567 (580)
Q Consensus 506 -~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L 567 (580)
.+. .........+..+........ ......++.++.+|+.+||+.||++|||++|+++|-
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 326 (360)
T 3eqc_A 265 NKFGMDSRPPMAIFELLDYIVNEPPP--KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 326 (360)
T ss_dssp ---------CCCHHHHHHHHHHSCCC--CCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred cccccCCCCcccchhhhhHHhccCCC--CCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence 000 000000111122211111110 011233567899999999999999999999999873
No 197
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=5.3e-41 Score=331.46 Aligned_cols=246 Identities=24% Similarity=0.338 Sum_probs=197.7
Q ss_pred CCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeec----CCceeeE
Q 038098 294 FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSS----DDFKALV 366 (580)
Q Consensus 294 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv 366 (580)
|...+.||+|+||.||+|... ++..||+|++.... ......+.+|+.++++++||||+++++++.. ....++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 667788999999999999865 68899999986543 2345678899999999999999999998864 3568999
Q ss_pred eeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEEecCCCCCEEeC-CCCcEEEccccCccccC
Q 038098 367 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP--IIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLL 443 (580)
Q Consensus 367 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~--i~H~dlk~~Nill~-~~~~~kl~Dfg~a~~~~ 443 (580)
|||+++|+|.+++... ..+++..++.++.||+.||.||| +.+ |+||||||+||+++ .++.+||+|||++....
T Consensus 108 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 108 TELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 9999999999998764 35899999999999999999999 887 99999999999998 88999999999997543
Q ss_pred CCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchh
Q 038098 444 KEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDAN 523 (580)
Q Consensus 444 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 523 (580)
.. ......||+.|+|||.+. +.++.++||||+||++|||++|+.||..... ......... .
T Consensus 184 ~~----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~----~~~~~~~~~---------~- 244 (290)
T 1t4h_A 184 AS----FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN----AAQIYRRVT---------S- 244 (290)
T ss_dssp TT----SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS----HHHHHHHHT---------T-
T ss_pred cc----ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCc----HHHHHHHHh---------c-
Confidence 22 223456899999999876 5689999999999999999999999865321 111111100 0
Q ss_pred ccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 524 LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.. .....+...++++.+++.+||+.||++|||++|+++|
T Consensus 245 --~~--~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 245 --GV--KPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp --TC--CCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred --cC--CccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 00 0111223345678999999999999999999999875
No 198
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.3e-41 Score=343.17 Aligned_cols=266 Identities=20% Similarity=0.258 Sum_probs=205.4
Q ss_pred hcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccch-----------------hhhHHHHHHHHhhcCCCCcceE
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRA-----------------FKSFDIECDMIKRIRHRNIIKI 353 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~e~~~l~~l~h~niv~~ 353 (580)
.++|.+.+.||+|+||.||+|.. +|+.||||++....... ...+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 36799999999999999999998 89999999996542211 1788999999999999999999
Q ss_pred EeeeecCCceeeEeeccCCCChHHH------hhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEEecCCCCCEEe
Q 038098 354 ISSCSSDDFKALVLEYMPHGSLEKC------LYSS-NYILDIFQRLNIMIDVASALEYLHFGYS-VPIIHCDLKPSNVLL 425 (580)
Q Consensus 354 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~-~~i~H~dlk~~Nill 425 (580)
++++...+..++||||+++|+|.++ +... ...+++..++.++.||+.||.||| + .+++||||+|+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEEE
Confidence 9999999999999999999999998 5543 467999999999999999999999 7 999999999999999
Q ss_pred CCCCcEEEccccCccccCCCCCcccccccccCCCcCCcccccCC-CCCC-chhhHhHHHHHHHHHhCCCCCCccccCCch
Q 038098 426 DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG-QVST-NGDVYSFGIMLMETFTRKKPTDEIFFGDMT 503 (580)
Q Consensus 426 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~-~~Dvws~Gvil~elltg~~p~~~~~~~~~~ 503 (580)
+.++.+||+|||.+...... ......|+..|+|||.+.+. .++. ++|||||||++|||++|+.||...... ..
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~ 260 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-VE 260 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-HH
T ss_pred cCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-HH
Confidence 99999999999999865332 33445689999999999877 5666 999999999999999999999753221 11
Q ss_pred HHHHHHhhcccchhhhcchhccC-CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 504 LKHWVNDLLPISVMEIVDANLLS-QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 504 ~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
........... ........... ...........++.++.+++.+||+.||++||+++|+++|
T Consensus 261 ~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 261 LFNNIRTKNIE-YPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHHHTSCCCC-CCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHHhccCcC-CccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11111100000 00000000000 0000001114567789999999999999999999999985
No 199
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=9.4e-42 Score=342.96 Aligned_cols=270 Identities=21% Similarity=0.247 Sum_probs=195.8
Q ss_pred HHhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc--chhhhHHHHHHHHhhcCCCCcceEEeeeecCCceee
Q 038098 289 QATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG--RAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKAL 365 (580)
Q Consensus 289 ~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 365 (580)
...++|.+.+.||+|+||.||+|... +|+.||||++..... .....+.+|++++++++||||+++++++...+..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 44578999999999999999999854 789999999864422 234567789999999999999999999999999999
Q ss_pred EeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEe-----CCCCcEEEccccCcc
Q 038098 366 VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL-----DDNMVAHLSDFGMAK 440 (580)
Q Consensus 366 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill-----~~~~~~kl~Dfg~a~ 440 (580)
||||+++ +|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+||++ +.++.+||+|||+++
T Consensus 111 v~e~~~~-~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 111 IFEYAEN-DLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EEECCSE-EHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EEecCCC-CHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 9999975 9999987654 4899999999999999999999 8999999999999999 455569999999998
Q ss_pred ccCCCCCcccccccccCCCcCCcccccCC-CCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhc-cc-c-h
Q 038098 441 PLLKEDQSLTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLL-PI-S-V 516 (580)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~-~~-~-~ 516 (580)
...... .......+|..|+|||.+.+. .++.++||||+||++|||++|+.||...... ..+........ +. . .
T Consensus 186 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~ 262 (329)
T 3gbz_A 186 AFGIPI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI-DQLFKIFEVLGLPDDTTW 262 (329)
T ss_dssp HHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTS
T ss_pred ccCCcc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH-HHHHHHHHHhCCCchhhh
Confidence 653222 123345689999999998774 4899999999999999999999998653211 11111111110 00 0 0
Q ss_pred hhhc-----chhccCCcc--cccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 517 MEIV-----DANLLSQKD--EHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 517 ~~~~-----d~~~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.... ......... ........++.++.+|+.+||+.||++|||++|+++|
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 0000 000000000 0001122356788999999999999999999999875
No 200
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.5e-42 Score=346.37 Aligned_cols=254 Identities=23% Similarity=0.334 Sum_probs=204.2
Q ss_pred cCCCcCceeccccCceEEEEEe----CCCCEEEEEEEeccc----cchhhhHHHHHHHHhhc-CCCCcceEEeeeecCCc
Q 038098 292 NGFSENNLIGRGGFGSVYKARI----QDGMEVAVKVFDLQY----GRAFKSFDIECDMIKRI-RHRNIIKIISSCSSDDF 362 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 362 (580)
++|.+.+.||+|+||.||+|+. .+|+.||||++.... ......+..|+++++++ +||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5788999999999999999986 368999999985432 23345677899999999 69999999999999999
Q ss_pred eeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCcccc
Q 038098 363 KALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL 442 (580)
Q Consensus 363 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~ 442 (580)
.++||||+++|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++.+
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred EEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 999999999999999987654 5899999999999999999999 899999999999999999999999999999865
Q ss_pred CCCCCcccccccccCCCcCCcccccC--CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhc
Q 038098 443 LKEDQSLTQTQTLATIGYMAPEYGRE--GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIV 520 (580)
Q Consensus 443 ~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (580)
.... ........||+.|+|||.+.+ ..++.++|||||||++|||+||+.||....... ....+....
T Consensus 210 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~--------- 278 (355)
T 1vzo_A 210 VADE-TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQAEISRRI--------- 278 (355)
T ss_dssp CGGG-GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHHHHHHHH---------
T ss_pred ccCC-CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHHHHHHHH---------
Confidence 3322 222344579999999999875 347899999999999999999999997532211 111111110
Q ss_pred chhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCC-----CHHHHHHHH
Q 038098 521 DANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRI-----NAKEIVTRL 567 (580)
Q Consensus 521 d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~ev~~~L 567 (580)
... ....+..++..+.+|+.+||..||++|| +++|+++|.
T Consensus 279 ---~~~----~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 279 ---LKS----EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ---HHC----CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ---hcc----CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 000 0112344567789999999999999999 999999875
No 201
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3.5e-41 Score=335.31 Aligned_cols=251 Identities=22% Similarity=0.336 Sum_probs=201.2
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc----cchhhhHHHHHHHHhhcCCCCcceEEeee--ecCCce
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY----GRAFKSFDIECDMIKRIRHRNIIKIISSC--SSDDFK 363 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~--~~~~~~ 363 (580)
.++|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++ .+....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 478999999999999999999864 68999999996542 23457788999999999999999999998 445678
Q ss_pred eeEeeccCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCcccc
Q 038098 364 ALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL 442 (580)
Q Consensus 364 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~ 442 (580)
++||||++++ |.+++... ...+++..++.++.||+.||.||| +.+++||||||+||+++.++.+||+|||++...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999876 76766543 456999999999999999999999 899999999999999999999999999999876
Q ss_pred CCCCCcccccccccCCCcCCcccccCCC--CCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhc
Q 038098 443 LKEDQSLTQTQTLATIGYMAPEYGREGQ--VSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIV 520 (580)
Q Consensus 443 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (580)
.............||..|+|||.+.+.. .+.++||||+|+++|||++|+.||.... ....... +
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~---------i 225 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-----IYKLFEN---------I 225 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHH---------H
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch-----HHHHHHH---------H
Confidence 4433333344566999999999987644 3789999999999999999999987521 1111110 0
Q ss_pred chhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 521 DANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 521 d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
... ....+..++..+.+++.+||+.||++||+++|+++|
T Consensus 226 ~~~-------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 226 GKG-------SYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp HHC-------CCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred hcC-------CCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000 111223466788999999999999999999999986
No 202
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=4.7e-41 Score=333.18 Aligned_cols=253 Identities=24% Similarity=0.335 Sum_probs=205.0
Q ss_pred HhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc---------chhhhHHHHHHHHhhcC-CCCcceEEeeee
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG---------RAFKSFDIECDMIKRIR-HRNIIKIISSCS 358 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~---------~~~~~~~~e~~~l~~l~-h~niv~~~~~~~ 358 (580)
..++|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3477999999999999999999875 689999999965421 22456778999999996 999999999999
Q ss_pred cCCceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccC
Q 038098 359 SDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGM 438 (580)
Q Consensus 359 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~ 438 (580)
..+..++||||+++++|.+++... ..+++..++.++.||+.||.||| +.+++||||+|+||+++.++.+||+|||+
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccc
Confidence 999999999999999999998764 45899999999999999999999 89999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccCCCcCCccccc------CCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhc
Q 038098 439 AKPLLKEDQSLTQTQTLATIGYMAPEYGR------EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLL 512 (580)
Q Consensus 439 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 512 (580)
+....... ......++..|+|||.+. ...++.++||||||+++|||++|+.||..... .....
T Consensus 171 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~--- 239 (298)
T 1phk_A 171 SCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-----MLMLR--- 239 (298)
T ss_dssp CEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH---
T ss_pred hhhcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH-----HHHHH---
Confidence 98664322 223456899999999874 45688999999999999999999999865211 01100
Q ss_pred ccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 513 PISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 513 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.+... ...........++.++.+++.+||+.||++||+++|+++|
T Consensus 240 -----~~~~~----~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 240 -----MIMSG----NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp -----HHHHT----CCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred -----HHhcC----CcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 00000 0000111224567789999999999999999999999874
No 203
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.8e-41 Score=334.35 Aligned_cols=244 Identities=20% Similarity=0.284 Sum_probs=199.8
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc--cchhhhHHHHHHHHhhc-CCCCcceEEeeeecCCceeeE
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY--GRAFKSFDIECDMIKRI-RHRNIIKIISSCSSDDFKALV 366 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 366 (580)
.++|...+.||+|+||.||+|... +++.||+|++.... ......+.+|+..+.++ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467899999999999999999876 79999999997542 33456788899999999 999999999999999999999
Q ss_pred eeccCCCChHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCC---------------
Q 038098 367 LEYMPHGSLEKCLYSSN---YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN--------------- 428 (580)
Q Consensus 367 ~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~--------------- 428 (580)
|||+++|+|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 99999999999987642 56899999999999999999999 8999999999999999844
Q ss_pred ----CcEEEccccCccccCCCCCcccccccccCCCcCCcccccCC-CCCCchhhHhHHHHHHHHHhCCCCCCccccCCch
Q 038098 429 ----MVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMT 503 (580)
Q Consensus 429 ----~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~ 503 (580)
..+||+|||.+....... ...||..|+|||.+.+. .++.++|||||||++|||++|.+|+... ..
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~~ 236 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG----DQ 236 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS----HH
T ss_pred cCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch----hH
Confidence 479999999998664322 23589999999998765 5668999999999999999999875431 11
Q ss_pred HHHHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 504 LKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 504 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.... ..... ...+..++.++.+++.+||+.||++||+++|+++|
T Consensus 237 ~~~~------------~~~~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 237 WHEI------------RQGRL-------PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp HHHH------------HTTCC-------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHHH------------HcCCC-------CCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1111 11000 11223456789999999999999999999999876
No 204
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.8e-41 Score=332.31 Aligned_cols=248 Identities=25% Similarity=0.355 Sum_probs=197.5
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc---cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeE
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY---GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALV 366 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 366 (580)
.++|.+.+.||+|+||.||+|... +|+.||||++.... ......+.+|+.++++++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 367889999999999999999876 79999999996542 23456788999999999999999999999999999999
Q ss_pred eeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCC
Q 038098 367 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED 446 (580)
Q Consensus 367 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 446 (580)
|||+++++|.+++...+ .+++..++.++.||+.||.||| +.+++|+||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 99999999999987654 5899999999999999999999 8999999999999999999999999999998653322
Q ss_pred CcccccccccCCCcCCcccccCCCC-CCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhcc
Q 038098 447 QSLTQTQTLATIGYMAPEYGREGQV-STNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLL 525 (580)
Q Consensus 447 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 525 (580)
......+++.|+|||.+.+..+ +.++||||+|+++|||++|+.||+.... ...... +...
T Consensus 166 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~~---------~~~~-- 226 (276)
T 2h6d_A 166 ---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-----PTLFKK---------IRGG-- 226 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH---------HHHC--
T ss_pred ---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH-----HHHHHH---------hhcC--
Confidence 1234468999999999987665 6899999999999999999999865211 111110 0000
Q ss_pred CCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 526 SQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 526 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
....+..++.++.+++.+||+.||++||+++|+++|
T Consensus 227 -----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 227 -----VFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -----cccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 011123456778999999999999999999999986
No 205
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=6.2e-42 Score=336.15 Aligned_cols=253 Identities=23% Similarity=0.306 Sum_probs=202.9
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeee--cCCceee
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCS--SDDFKAL 365 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~l 365 (580)
.++|+..+.||+|+||.||+|... +|+.||+|++.... ....+.+..|++++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 357889999999999999999875 68999999997543 234567889999999999999999999874 4678899
Q ss_pred EeeccCCCChHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCC-----eEEecCCCCCEEeCCCCcEEEcccc
Q 038098 366 VLEYMPHGSLEKCLYSSN---YILDIFQRLNIMIDVASALEYLHFGYSVP-----IIHCDLKPSNVLLDDNMVAHLSDFG 437 (580)
Q Consensus 366 v~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~-----i~H~dlk~~Nill~~~~~~kl~Dfg 437 (580)
||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+ ++||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 999999999999987532 45899999999999999999999 777 9999999999999999999999999
Q ss_pred CccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchh
Q 038098 438 MAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVM 517 (580)
Q Consensus 438 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 517 (580)
+++...... .......|+..|+|||.+.+..++.++||||||+++|||++|+.||..... ......
T Consensus 162 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~---------- 227 (279)
T 2w5a_A 162 LARILNHDT--SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELAGK---------- 227 (279)
T ss_dssp HHHHC---C--HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHH----------
T ss_pred hheeecccc--ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--HHHHHH----------
Confidence 998653321 122344689999999999988999999999999999999999999875311 111110
Q ss_pred hhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 038098 518 EIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLL 568 (580)
Q Consensus 518 ~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~ 568 (580)
+... .. ...+..++.++.+++.+||+.||++||+++|+++++.
T Consensus 228 -i~~~-~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 228 -IREG-KF------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp -HHHT-CC------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred -Hhhc-cc------ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 0000 00 0122346678999999999999999999999998753
No 206
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4.8e-41 Score=367.46 Aligned_cols=250 Identities=20% Similarity=0.260 Sum_probs=207.3
Q ss_pred HhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecc---ccchhhhHHHHHHHHhhc-CCCCcceEEeeeecCCcee
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQ---YGRAFKSFDIECDMIKRI-RHRNIIKIISSCSSDDFKA 364 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 364 (580)
..++|.+.+.||+|+||.||+|+.. +++.||||++... .......+..|..++..+ +||+|+++++++.+.+..+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3567999999999999999999865 6889999999754 234456778899999988 7999999999999999999
Q ss_pred eEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCC
Q 038098 365 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLK 444 (580)
Q Consensus 365 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 444 (580)
+||||+++|+|.+++...+ .+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+....
T Consensus 419 lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 9999999999999988654 5999999999999999999999 89999999999999999999999999999985432
Q ss_pred CCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhc
Q 038098 445 EDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANL 524 (580)
Q Consensus 445 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 524 (580)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..... .+...
T Consensus 495 ~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-----~~~~~--------~i~~~-- 557 (674)
T 3pfq_A 495 DGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DELFQ--------SIMEH-- 557 (674)
T ss_dssp TTC--CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH--------HHHSS--
T ss_pred CCc--ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-----HHHHH--------HHHhC--
Confidence 222 23456799999999999999999999999999999999999999975211 11111 11111
Q ss_pred cCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCH-----HHHHHH
Q 038098 525 LSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINA-----KEIVTR 566 (580)
Q Consensus 525 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~-----~ev~~~ 566 (580)
....+...+.++.+|+.+||+.||++||++ +||++|
T Consensus 558 ------~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 558 ------NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp ------CCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred ------CCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 112234567889999999999999999997 777654
No 207
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=5.8e-42 Score=350.44 Aligned_cols=263 Identities=11% Similarity=0.125 Sum_probs=189.7
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc---chhhhHHHHHHHHhhc--CCCCcceEE-------eeee
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG---RAFKSFDIECDMIKRI--RHRNIIKII-------SSCS 358 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l--~h~niv~~~-------~~~~ 358 (580)
..|...+.||+|+||.||+|.+. +|+.||||++..... .....+..|+++++.+ +||||++++ +.+.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 44888899999999999999965 789999999976432 3345677785555544 699988755 3333
Q ss_pred cC-----------------CceeeEeeccCCCChHHHhhcCCCCCCHHHH------HHHHHHHHHHHHHHhcCCCCCeEE
Q 038098 359 SD-----------------DFKALVLEYMPHGSLEKCLYSSNYILDIFQR------LNIMIDVASALEYLHFGYSVPIIH 415 (580)
Q Consensus 359 ~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~------~~i~~~i~~~l~~Lh~~~~~~i~H 415 (580)
.. ...++||||++ |+|.+++...+..+++..+ +.++.||++||+||| +.+|+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~ivH 217 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLVH 217 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEEE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCcc
Confidence 22 33799999998 8999999876555666667 788899999999999 999999
Q ss_pred ecCCCCCEEeCCCCcEEEccccCccccCCCCCcccccccccCCCcCCcccccC--CCCCCchhhHhHHHHHHHHHhCCCC
Q 038098 416 CDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGRE--GQVSTNGDVYSFGIMLMETFTRKKP 493 (580)
Q Consensus 416 ~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dvws~Gvil~elltg~~p 493 (580)
|||||+|||++.++.+||+|||+|+..... .....+|+.|+|||.+.+ ..++.++|||||||++|||+||+.|
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999865221 113457799999999987 6799999999999999999999999
Q ss_pred CCccccCCchHHHHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHHHH
Q 038098 494 TDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR--LLKIR 571 (580)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~--L~~~~ 571 (580)
|......... .|.. ............+.....++..+.+|+.+||+.||++|||++|+++| ++++.
T Consensus 293 f~~~~~~~~~--~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 360 (371)
T 3q60_A 293 FGLVTPGIKG--SWKR----------PSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQ 360 (371)
T ss_dssp TTBCCTTCTT--CCCB----------CCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHH
T ss_pred CCCcCccccc--chhh----------hhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHH
Confidence 9764221100 0000 00000001111222234667889999999999999999999999874 44544
Q ss_pred HHHH
Q 038098 572 DSLL 575 (580)
Q Consensus 572 ~~~~ 575 (580)
.+..
T Consensus 361 ~~~~ 364 (371)
T 3q60_A 361 NEIS 364 (371)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 4443
No 208
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2e-41 Score=334.47 Aligned_cols=251 Identities=22% Similarity=0.255 Sum_probs=188.0
Q ss_pred hcCCCcCceeccccCceEEEEEe-CCCCEEEEEEEecccc--chhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 291 TNGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFDLQYG--RAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
.++|+..+.||+|+||.||+|.. .+|+.||+|++..... .....+..+...++.++||||+++++++..++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 46788999999999999999986 4789999999865422 22233444555588889999999999999999999999
Q ss_pred eccCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEEecCCCCCEEeCCCCcEEEccccCccccC
Q 038098 368 EYMPHGSLEKCLYS---SNYILDIFQRLNIMIDVASALEYLHFGYSV-PIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 443 (580)
Q Consensus 368 e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~-~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 443 (580)
||+++ +|.+++.. .+..+++..++.++.|++.||+||| +. +|+||||||+||+++.++.+||+|||+++...
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99975 88777654 4567999999999999999999999 87 99999999999999999999999999998653
Q ss_pred CCCCcccccccccCCCcCCcccc----cCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhh
Q 038098 444 KEDQSLTQTQTLATIGYMAPEYG----REGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEI 519 (580)
Q Consensus 444 ~~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (580)
... ......||+.|+|||.+ .+..++.++||||+||++|||+||+.||+............
T Consensus 162 ~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~------------ 226 (290)
T 3fme_A 162 DDV---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV------------ 226 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHH------------
T ss_pred ccc---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHH------------
Confidence 322 22334689999999995 56678999999999999999999999987521111111111
Q ss_pred cchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 520 VDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 520 ~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
...... ......++.++.+++.+||+.||++|||++|+++|
T Consensus 227 ~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 227 VEEPSP------QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp HHSCCC------CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred hccCCC------CcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 111100 01123456779999999999999999999999985
No 209
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.6e-41 Score=337.85 Aligned_cols=253 Identities=25% Similarity=0.287 Sum_probs=199.1
Q ss_pred HhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc--------cchhhhHHHHHHHHhhcCCCCcceEEeeeecC
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY--------GRAFKSFDIECDMIKRIRHRNIIKIISSCSSD 360 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 360 (580)
..++|.+.+.||+|+||.||+|... +++.||||++.... ......+..|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3467999999999999999999865 68899999985432 12234688999999999999999999999765
Q ss_pred CceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCc---EEEcccc
Q 038098 361 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMV---AHLSDFG 437 (580)
Q Consensus 361 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~---~kl~Dfg 437 (580)
+ .++||||+++|+|.+++... ..+++..++.++.||+.||.||| +.+|+||||||+||+++.++. +||+|||
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 162 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred c-eEEEEecCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCc
Confidence 5 89999999999999988654 46899999999999999999999 899999999999999987665 9999999
Q ss_pred CccccCCCCCcccccccccCCCcCCccccc---CCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhccc
Q 038098 438 MAKPLLKEDQSLTQTQTLATIGYMAPEYGR---EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPI 514 (580)
Q Consensus 438 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 514 (580)
+++..... .......||+.|+|||.+. ...++.++|||||||++|||++|+.||....... .+.......
T Consensus 163 ~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~--- 235 (322)
T 2ycf_A 163 HSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITSG--- 235 (322)
T ss_dssp TCEECCCC---HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-CHHHHHHHT---
T ss_pred cceecccc---cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-HHHHHHHhC---
Confidence 99865322 1223456899999999863 5678999999999999999999999997532211 111111110
Q ss_pred chhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 515 SVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 515 ~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
. ..........++.++.+++.+||+.||++||+++|+++|
T Consensus 236 ---------~---~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 236 ---------K---YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp ---------C---CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ---------c---cccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 0 000011223456789999999999999999999999865
No 210
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.7e-41 Score=343.16 Aligned_cols=272 Identities=23% Similarity=0.310 Sum_probs=200.5
Q ss_pred HHhcCCCcCceeccccCceEEEEEe-CCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeec--------
Q 038098 289 QATNGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSS-------- 359 (580)
Q Consensus 289 ~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-------- 359 (580)
...++|...+.||+|+||.||+|.. .+|+.||||++.... ....+|+++++.++||||+++++++..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 4567899999999999999999986 479999999986432 223479999999999999999999843
Q ss_pred ------------------------------CCceeeEeeccCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHh
Q 038098 360 ------------------------------DDFKALVLEYMPHGSLEKCLYS---SNYILDIFQRLNIMIDVASALEYLH 406 (580)
Q Consensus 360 ------------------------------~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh 406 (580)
....++||||+++ +|.+.+.. .+..+++..+..++.||++||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2347899999984 88777653 4467999999999999999999999
Q ss_pred cCCCCCeEEecCCCCCEEeC-CCCcEEEccccCccccCCCCCcccccccccCCCcCCcccccCC-CCCCchhhHhHHHHH
Q 038098 407 FGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIML 484 (580)
Q Consensus 407 ~~~~~~i~H~dlk~~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dvws~Gvil 484 (580)
+.+|+||||||+||+++ .++.+||+|||+|+.+.... ......+|..|+|||.+.+. .++.++||||+||++
T Consensus 159 ---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 159 ---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp ---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred ---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 99999999999999998 68999999999998663332 22345689999999988764 589999999999999
Q ss_pred HHHHhCCCCCCccccCCchHHHHHHhhcccchhhhc--chhcc----C---CcccccchhhhhHHHHHHHHhhccCCCCC
Q 038098 485 METFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIV--DANLL----S---QKDEHFTTKGQCVSFIFNLAMKCTVESPE 555 (580)
Q Consensus 485 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~~~~----~---~~~~~~~~~~~~~~~l~~l~~~cl~~dP~ 555 (580)
|||++|+.||...... ..+.......-......+. ++... . ........+..++.++.+|+.+||+.||+
T Consensus 233 ~ell~g~~pf~~~~~~-~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 233 GELILGKPLFSGETSI-DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred HHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 9999999999763211 1112221111111100000 00000 0 00000112234677899999999999999
Q ss_pred CCCCHHHHHHH--HHHHHH
Q 038098 556 QRINAKEIVTR--LLKIRD 572 (580)
Q Consensus 556 ~Rps~~ev~~~--L~~~~~ 572 (580)
+|||+.|+++| ++++++
T Consensus 312 ~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 312 LRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp GSCCHHHHHTSGGGHHHHH
T ss_pred hCCCHHHHhcCHHHHHHHh
Confidence 99999999975 444444
No 211
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.9e-41 Score=341.23 Aligned_cols=251 Identities=23% Similarity=0.307 Sum_probs=199.2
Q ss_pred hcCCCcCceeccccCceEEEEEe-CCCCEEEEEEEeccc-cchhhhHHHHHHH-HhhcCCCCcceEEeeeecCCceeeEe
Q 038098 291 TNGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFDLQY-GRAFKSFDIECDM-IKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ......+..|..+ ++.++||||+++++++...+..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 46788889999999999999986 478999999996542 2334455556655 77889999999999999999999999
Q ss_pred eccCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEEecCCCCCEEeCCCCcEEEccccCccccC
Q 038098 368 EYMPHGSLEKCLYS---SNYILDIFQRLNIMIDVASALEYLHFGYSV-PIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 443 (580)
Q Consensus 368 e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~-~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 443 (580)
||+++ +|.+++.. ....+++..++.++.||+.||+||| +. +|+||||||+||+++.++.+||+|||+++...
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 99975 99888764 4567999999999999999999999 76 99999999999999999999999999998653
Q ss_pred CCCCcccccccccCCCcCCccccc----CCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhh
Q 038098 444 KEDQSLTQTQTLATIGYMAPEYGR----EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEI 519 (580)
Q Consensus 444 ~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (580)
.. .......||+.|+|||.+. ...++.++|||||||++|||+||+.||+........+.. .
T Consensus 206 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~------------~ 270 (340)
T 3an0_A 206 DS---VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ------------V 270 (340)
T ss_dssp CH---HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHH------------H
T ss_pred cc---cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHH------------H
Confidence 21 1223356999999999864 347899999999999999999999998752111111111 1
Q ss_pred cchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 520 VDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 520 ~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
+..... ......++.++.+++.+||+.||++||+++|+++|
T Consensus 271 ~~~~~~------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 271 VEEPSP------QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp HHSCCC------CCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred hcCCCC------CCCcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 111000 01123456789999999999999999999999885
No 212
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=7.1e-42 Score=339.86 Aligned_cols=263 Identities=23% Similarity=0.283 Sum_probs=188.3
Q ss_pred HhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
..++|.+.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 4578999999999999999999854 68999999986442 334567888999999999999999999999999999999
Q ss_pred eccCCCChHHHhhc-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCcc
Q 038098 368 EYMPHGSLEKCLYS-------SNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAK 440 (580)
Q Consensus 368 e~~~~g~L~~~l~~-------~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~ 440 (580)
||+++++|.+++.. ....+++..++.++.||+.||.||| +.+++||||||+||+++.++.+||+|||++.
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 99999999999864 3456899999999999999999999 8999999999999999999999999999997
Q ss_pred ccCCCCC---cccccccccCCCcCCcccccC-CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccch
Q 038098 441 PLLKEDQ---SLTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISV 516 (580)
Q Consensus 441 ~~~~~~~---~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 516 (580)
....... ........||+.|+|||.+.+ ..++.++||||||+++|||++|+.||........ ............
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~ 247 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV--LMLTLQNDPPSL 247 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH--HHHHHTSSCCCT
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH--HHHHhccCCCcc
Confidence 6543221 111234568999999998865 5689999999999999999999999976322111 000000000000
Q ss_pred hhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 517 MEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 517 ~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
. ...........++.++.+++.+||+.||++||+++|+++|
T Consensus 248 ~---------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 248 E---------TGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp T---------C-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred c---------cccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0 0000011123456778999999999999999999999985
No 213
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=7.4e-41 Score=341.34 Aligned_cols=270 Identities=24% Similarity=0.264 Sum_probs=203.9
Q ss_pred HhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecC-----Cc
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSD-----DF 362 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~ 362 (580)
..++|+..+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++... ..
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 3467999999999999999999865 68899999996433 23346788999999999999999999998654 36
Q ss_pred eeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCcccc
Q 038098 363 KALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL 442 (580)
Q Consensus 363 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~ 442 (580)
.++||||++ |+|.+++... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 105 ~~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 899999997 4999988764 4899999999999999999999 899999999999999999999999999999866
Q ss_pred CCCCCc-ccccccccCCCcCCcccccC-CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccc---hh
Q 038098 443 LKEDQS-LTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPIS---VM 517 (580)
Q Consensus 443 ~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~ 517 (580)
...... .......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||......+ .+........... ..
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~ 257 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGSPSQEDLN 257 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCSCCHHHHH
T ss_pred CCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCCCCHHHHH
Confidence 433221 12344579999999998654 458999999999999999999999997632211 1111111100000 00
Q ss_pred hhcc--------hhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 518 EIVD--------ANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 518 ~~~d--------~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
...+ ................++.++.+|+.+||+.||++|||++|+++|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 000000000111223456789999999999999999999999875
No 214
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=8.7e-41 Score=331.41 Aligned_cols=268 Identities=25% Similarity=0.298 Sum_probs=203.1
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEee
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 368 (580)
++|+..+.||+|+||.||+|... +|+.||||++.... ......+.+|++++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57888999999999999999875 78999999986442 2334678899999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCC
Q 038098 369 YMPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 369 ~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 447 (580)
|++ ++|.+++.... ..+++..++.++.||++||+||| +.+++||||||+||+++.++.+||+|||++........
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 158 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence 997 59999987654 56899999999999999999999 89999999999999999999999999999986533221
Q ss_pred cccccccccCCCcCCcccccCCC-CCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccc---hhhhc---
Q 038098 448 SLTQTQTLATIGYMAPEYGREGQ-VSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPIS---VMEIV--- 520 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~--- 520 (580)
......+|..|+|||.+.+.. ++.++|||||||++|||+||+.||......+ ............. .....
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T 2r3i_A 159 --TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSMP 235 (299)
T ss_dssp --CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGST
T ss_pred --ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCCCchhhhhHhhcCc
Confidence 223456899999999987765 7999999999999999999999997632111 1111111110000 00000
Q ss_pred --chhccCCcccc-cchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 521 --DANLLSQKDEH-FTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 521 --d~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
........... .......+.++.+++.+||+.||++|||++|+++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000000 01123456789999999999999999999999874
No 215
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=9.5e-41 Score=341.26 Aligned_cols=262 Identities=23% Similarity=0.250 Sum_probs=193.3
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecCC------
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDD------ 361 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 361 (580)
.++|...+.||+|+||.||+|... +|+.||||++.... ......+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 367999999999999999999865 68999999997542 233467888999999999999999999987654
Q ss_pred ceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccc
Q 038098 362 FKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 441 (580)
Q Consensus 362 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~ 441 (580)
..++||||+++ +|.+++. ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQ---MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHH---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHh---hccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 67999999975 7888775 24899999999999999999999 89999999999999999999999999999985
Q ss_pred cCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhh--ccc-----
Q 038098 442 LLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL--LPI----- 514 (580)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~--~~~----- 514 (580)
.... .......||+.|+|||.+.+..++.++||||+||++|||++|+.||.+... ...|..-. ...
T Consensus 177 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~ 249 (371)
T 2xrw_A 177 AGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH----IDQWNKVIEQLGTPCPEF 249 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHC-CCCCCHHH
T ss_pred cccc---cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHhCCCCHHH
Confidence 5322 123345789999999999998999999999999999999999999975321 11111100 000
Q ss_pred ------chhhhcchhcc----------C--CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 515 ------SVMEIVDANLL----------S--QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 515 ------~~~~~~d~~~~----------~--~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
........... . ............+.++.+|+.+||+.||++|||++|+++|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 250 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 00000000000 0 0000011123347789999999999999999999999986
No 216
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2e-41 Score=344.98 Aligned_cols=264 Identities=23% Similarity=0.272 Sum_probs=185.9
Q ss_pred HhcCCCcCceeccccCceEEEEEe-CCCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecC------
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSD------ 360 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 360 (580)
..++|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+|+++++.++||||+++++++...
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 347899999999999999999985 478999999986432 23456788999999999999999999998654
Q ss_pred CceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCcc
Q 038098 361 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAK 440 (580)
Q Consensus 361 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~ 440 (580)
...++|+|++ +++|.+++.. ..+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CCCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred CeEEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 5679999999 6799998865 45899999999999999999999 8999999999999999999999999999998
Q ss_pred ccCCCCCcccccccccCCCcCCcccccC-CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcc--cc--
Q 038098 441 PLLKEDQSLTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLP--IS-- 515 (580)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~--~~-- 515 (580)
.... ......||..|+|||.+.+ ..++.++||||+||++|||++|+.||.+.... ..+.......-. ..
T Consensus 181 ~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~ 254 (367)
T 2fst_X 181 HTAD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPGAELL 254 (367)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCHHHH
T ss_pred cccc-----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHH
Confidence 6432 1234578999999999876 67899999999999999999999999753211 111111111000 00
Q ss_pred -------hhhhcchhccCCcccc-cchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 516 -------VMEIVDANLLSQKDEH-FTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 516 -------~~~~~d~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
....+.. +....... ......++.++.+|+.+||..||++|||++|+++|
T Consensus 255 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 255 KKISSESARNYIQS-LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp TTCCCHHHHHHHHT-SCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhhhHHHHHHHhc-cCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0001000 00000000 11123456789999999999999999999999876
No 217
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=341.60 Aligned_cols=255 Identities=25% Similarity=0.318 Sum_probs=199.0
Q ss_pred HHHHhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhc-CCCCcceEEeeeec-----
Q 038098 287 IFQATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRI-RHRNIIKIISSCSS----- 359 (580)
Q Consensus 287 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~----- 359 (580)
+....++|++.+.||+|+||.||+|... +|+.||||++.... .....+..|+.+++++ +||||+++++++..
T Consensus 19 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 97 (326)
T 2x7f_A 19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97 (326)
T ss_dssp CCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C
T ss_pred ccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc
Confidence 3345678999999999999999999864 78999999986543 3457788999999999 79999999999876
Q ss_pred -CCceeeEeeccCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEcccc
Q 038098 360 -DDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFG 437 (580)
Q Consensus 360 -~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 437 (580)
.+..++||||+++|+|.+++.... ..+++..++.++.||+.||.||| +.+|+||||||+||+++.++.+||+|||
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg 174 (326)
T 2x7f_A 98 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFG 174 (326)
T ss_dssp CCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCT
T ss_pred ccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeCc
Confidence 467899999999999999988653 56899999999999999999999 8999999999999999999999999999
Q ss_pred CccccCCCCCcccccccccCCCcCCccccc-----CCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhc
Q 038098 438 MAKPLLKEDQSLTQTQTLATIGYMAPEYGR-----EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLL 512 (580)
Q Consensus 438 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 512 (580)
++....... .......||..|+|||.+. +..++.++|||||||++|||++|+.||...... .....
T Consensus 175 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~----- 245 (326)
T 2x7f_A 175 VSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM--RALFL----- 245 (326)
T ss_dssp TTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHH-----
T ss_pred CceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--HHHHH-----
Confidence 998653221 1223456899999999986 567899999999999999999999998652110 00000
Q ss_pred ccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 513 PISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 513 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
+..... .......++..+.+++.+||..||++||+++|+++|
T Consensus 246 ------~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 246 ------IPRNPA------PRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp ------HHHSCC------CCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ------hhcCcc------ccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000 001123456788999999999999999999999985
No 218
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=6.7e-41 Score=348.43 Aligned_cols=197 Identities=22% Similarity=0.289 Sum_probs=171.3
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhc------CCCCcceEEeeeecCCce
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRI------RHRNIIKIISSCSSDDFK 363 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~~~~~~~~~~~~ 363 (580)
..+|++.+.||+|+||.||+|... +++.||||++... ......+..|+++++.+ .|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 456889999999999999999865 6899999999643 23345677788888877 577999999999999999
Q ss_pred eeEeeccCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCc--EEEccccCcc
Q 038098 364 ALVLEYMPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMV--AHLSDFGMAK 440 (580)
Q Consensus 364 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~--~kl~Dfg~a~ 440 (580)
++||||+. ++|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+|||++.++. +||+|||+++
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999996 59999887655 45899999999999999999999 899999999999999999887 9999999997
Q ss_pred ccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCcc
Q 038098 441 PLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEI 497 (580)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~ 497 (580)
..... .....||+.|+|||++.+..++.++|||||||++|||+||++||...
T Consensus 251 ~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 251 YEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp ETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 54322 23457899999999999999999999999999999999999999763
No 219
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.9e-41 Score=367.08 Aligned_cols=259 Identities=23% Similarity=0.360 Sum_probs=207.8
Q ss_pred hcCCCcCceeccccCceEEEEEeCC----CCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceee
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQD----GMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKAL 365 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 365 (580)
.++|.+.+.||+|+||.||+|.+.. +..||+|++.... ....+.+..|+.++++++||||+++++++. ++..++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence 3557778899999999999998642 4579999886432 233467889999999999999999999985 456899
Q ss_pred EeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCC
Q 038098 366 VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE 445 (580)
Q Consensus 366 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 445 (580)
||||+++|+|.+++...+..+++..++.++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 468 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~ 544 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 544 (656)
T ss_dssp EEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-
T ss_pred EEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecCCC
Confidence 99999999999999887777999999999999999999999 899999999999999999999999999999866433
Q ss_pred CCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhcchhc
Q 038098 446 DQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANL 524 (580)
Q Consensus 446 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 524 (580)
. ........+|+.|+|||.+.+..++.++|||||||++|||++ |..||...... ..... +.+.
T Consensus 545 ~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--~~~~~-----------i~~~-- 608 (656)
T 2j0j_A 545 T-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGR-----------IENG-- 608 (656)
T ss_dssp ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHH-----------HHHT--
T ss_pred c-ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--HHHHH-----------HHcC--
Confidence 2 222233457789999999988899999999999999999997 99998653111 11111 1000
Q ss_pred cCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 038098 525 LSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574 (580)
Q Consensus 525 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~ 574 (580)
.....+..++..+.+++.+||+.||++||++.|+++.|+++.++.
T Consensus 609 -----~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 609 -----ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -----CCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 011223456788999999999999999999999999999998654
No 220
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=8e-41 Score=345.48 Aligned_cols=265 Identities=22% Similarity=0.226 Sum_probs=200.8
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcC--------CCCcceEEeeee----
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIR--------HRNIIKIISSCS---- 358 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~~~~~~~---- 358 (580)
++|.+.+.||+|+||.||+|+.. +++.||||++... ......+.+|++++++++ |+||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 67999999999999999999854 6889999998643 234567888999999985 788999999987
Q ss_pred cCCceeeEeeccCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEEecCCCCCEEeCCCC-------
Q 038098 359 SDDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSV-PIIHCDLKPSNVLLDDNM------- 429 (580)
Q Consensus 359 ~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~-~i~H~dlk~~Nill~~~~------- 429 (580)
.....++||||+ ++++.+++... ...+++..++.++.||+.||+||| +. +|+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~~ 191 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRLA 191 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhhh
Confidence 566889999999 55666655544 367999999999999999999999 87 999999999999999775
Q ss_pred ------------------------------------------cEEEccccCccccCCCCCcccccccccCCCcCCccccc
Q 038098 430 ------------------------------------------VAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467 (580)
Q Consensus 430 ------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 467 (580)
.+||+|||+++..... .....||..|+|||++.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~~ 266 (397)
T 1wak_A 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVLI 266 (397)
T ss_dssp HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHHH
T ss_pred hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChhhc
Confidence 7999999999865332 23456899999999999
Q ss_pred CCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCch----HHHHHHhhcccchhhhcch-----hccCC-----------
Q 038098 468 EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMT----LKHWVNDLLPISVMEIVDA-----NLLSQ----------- 527 (580)
Q Consensus 468 ~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~d~-----~~~~~----------- 527 (580)
+..++.++|||||||++|||+||+.||......... ................+.. .....
T Consensus 267 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (397)
T 1wak_A 267 GSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLK 346 (397)
T ss_dssp TSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCC
T ss_pred CCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccC
Confidence 999999999999999999999999999764322111 0000100000000000000 00000
Q ss_pred -------cccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 528 -------KDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 528 -------~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.......+...+.++.+|+.+||+.||++|||++|+++|
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 347 PWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred CcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 000112235567889999999999999999999999975
No 221
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.6e-40 Score=327.57 Aligned_cols=252 Identities=22% Similarity=0.306 Sum_probs=204.3
Q ss_pred HhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeE
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALV 366 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 366 (580)
..++|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++...+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 4567999999999999999999875 78999999996543 23457788999999999999999999999999999999
Q ss_pred eeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCC---CcEEEccccCccccC
Q 038098 367 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN---MVAHLSDFGMAKPLL 443 (580)
Q Consensus 367 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~---~~~kl~Dfg~a~~~~ 443 (580)
|||+++++|.+++.... .+++..++.++.||+.||.||| +.+++||||||+||+++.+ +.+||+|||++....
T Consensus 100 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred EEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 99999999999886544 5899999999999999999999 8999999999999999754 479999999998653
Q ss_pred CCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchh
Q 038098 444 KEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDAN 523 (580)
Q Consensus 444 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 523 (580)
.... .....+++.|+|||.+.+ .++.++||||+|+++|||++|+.||..... ...... +..
T Consensus 176 ~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~~--------~~~-- 236 (287)
T 2wei_A 176 QNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-----YDILKR--------VET-- 236 (287)
T ss_dssp CCSS---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH--------HHH--
T ss_pred CCCc---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH-----HHHHHH--------HHc--
Confidence 3221 223458889999998865 589999999999999999999999865311 111110 000
Q ss_pred ccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 524 LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
............++.++.+++.+||+.||++|||++|++++
T Consensus 237 --~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 237 --GKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp --CCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred --CCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 01111112234567789999999999999999999999986
No 222
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.1e-40 Score=340.84 Aligned_cols=263 Identities=20% Similarity=0.254 Sum_probs=198.8
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc--chhhhHHHHHHHHhhcCCCCcceEEeeeecCCce----
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG--RAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFK---- 363 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~---- 363 (580)
.++|...+.||+|+||.||+|... +|+.||||++..... .....+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 467889999999999999999865 689999999965422 2356788999999999999999999999877655
Q ss_pred --eeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccc
Q 038098 364 --ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 441 (580)
Q Consensus 364 --~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~ 441 (580)
++||||+. ++|.+++. ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG---MEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHhh---cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999997 58888763 34899999999999999999999 89999999999999999999999999999985
Q ss_pred cCCCCCcccccccccCCCcCCcccccC-CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcc--cc---
Q 038098 442 LLKEDQSLTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLP--IS--- 515 (580)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~--~~--- 515 (580)
... ......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||...... ..+......... ..
T Consensus 194 ~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~ 267 (371)
T 4exu_A 194 ADA-----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGTEFVQ 267 (371)
T ss_dssp -----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCHHHHT
T ss_pred ccc-----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCcHHHHH
Confidence 432 2234568999999999877 68899999999999999999999999763211 111111110000 00
Q ss_pred ------hhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 516 ------VMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 516 ------~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
......................++.++.+|+.+||+.||++|||++|+++|
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 000000000000111111223567889999999999999999999999876
No 223
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.1e-40 Score=331.20 Aligned_cols=253 Identities=23% Similarity=0.330 Sum_probs=195.0
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeec----------
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSS---------- 359 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~---------- 359 (580)
.++|+..+.||+|+||.||+|+.. +|+.||||++... ......+.+|++++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 457889999999999999999865 7899999998643 2345678899999999999999999998754
Q ss_pred ---CCceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccc
Q 038098 360 ---DDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDF 436 (580)
Q Consensus 360 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Df 436 (580)
.+..++||||+++|+|.+++...+..+++..++.++.||++||+||| +.+++||||||+||+++.++.+||+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeC
Confidence 45678999999999999999877777899999999999999999999 899999999999999999999999999
Q ss_pred cCccccCCCCC------------cccccccccCCCcCCcccccCC-CCCCchhhHhHHHHHHHHHhCCCCCCccccCCch
Q 038098 437 GMAKPLLKEDQ------------SLTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMT 503 (580)
Q Consensus 437 g~a~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~ 503 (580)
|++........ ........||..|+|||.+.+. .++.++||||+||++|||++ ||... ..
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~----~~ 233 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG----ME 233 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH----HH
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc----hh
Confidence 99986532210 1122345689999999998754 78999999999999999998 54321 01
Q ss_pred HHHHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 504 LKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 504 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
....... +.... ... ........+..+.+++.+||+.||++|||++|+++|
T Consensus 234 ~~~~~~~--------~~~~~-~~~---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 234 RVNILKK--------LRSVS-IEF---PPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHH--------HHSTT-CCC---CTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHHh--------ccccc-ccc---CccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 1111111 00000 000 011223456778999999999999999999999985
No 224
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=7.3e-41 Score=334.23 Aligned_cols=254 Identities=24% Similarity=0.383 Sum_probs=198.2
Q ss_pred HhcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccc--cchhhhHHHHHHHHhhcC--CCCcceEEeeeecCCceee
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIR--HRNIIKIISSCSSDDFKAL 365 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~l 365 (580)
..++|.+.+.||+|+||.||+|...+++.||||++.... ......+.+|++++.+++ ||||+++++++...+..++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 346789999999999999999998889999999996543 234577889999999997 5999999999999999999
Q ss_pred EeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCC
Q 038098 366 VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKE 445 (580)
Q Consensus 366 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 445 (580)
||| +.+++|.+++.... .+++..++.++.||++||.||| +.+|+||||||+||++++ +.+||+|||+++.....
T Consensus 106 v~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~ 179 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPD 179 (313)
T ss_dssp EEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC----
T ss_pred EEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeeccccccccCc
Confidence 999 55789999987654 6899999999999999999999 899999999999999965 89999999999876443
Q ss_pred CCcccccccccCCCcCCcccccC-----------CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhccc
Q 038098 446 DQSLTQTQTLATIGYMAPEYGRE-----------GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPI 514 (580)
Q Consensus 446 ~~~~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 514 (580)
..........||+.|+|||.+.+ ..++.++||||||+++|||++|+.||...... ...
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~---~~~-------- 248 (313)
T 3cek_A 180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---ISK-------- 248 (313)
T ss_dssp ----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH---HHH--------
T ss_pred cccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH---HHH--------
Confidence 33333345568999999998865 46888999999999999999999998653211 111
Q ss_pred chhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 038098 515 SVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567 (580)
Q Consensus 515 ~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L 567 (580)
.....+... ....+...+.++.+++.+||+.||++||+++|++++-
T Consensus 249 -~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 249 -LHAIIDPNH------EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp -HHHHHCTTS------CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred -HHHHHhccc------ccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 111111111 1111223456789999999999999999999999863
No 225
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.5e-40 Score=344.92 Aligned_cols=262 Identities=24% Similarity=0.335 Sum_probs=194.9
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecC------Ccee
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSD------DFKA 364 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~ 364 (580)
.+|...+.||+|+||.||+|++. +|+.||||++.... ....+|++++++++||||+++++++... ...+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 45888899999999999999975 68999999986432 2334699999999999999999987432 2367
Q ss_pred eEeeccCCCChHHHhh---cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCC-CcEEEccccCcc
Q 038098 365 LVLEYMPHGSLEKCLY---SSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN-MVAHLSDFGMAK 440 (580)
Q Consensus 365 lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~-~~~kl~Dfg~a~ 440 (580)
+||||+++ ++.+.+. .....+++..++.++.||++||+||| +.+|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999976 6666554 34567999999999999999999999 9999999999999999955 678999999998
Q ss_pred ccCCCCCcccccccccCCCcCCcccccCC-CCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccc---h
Q 038098 441 PLLKEDQSLTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPIS---V 516 (580)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~ 516 (580)
.+.... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||..... ...+.......-... +
T Consensus 206 ~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 206 QLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp ECCTTC---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCHHHH
T ss_pred hcccCC---CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHH
Confidence 663322 22345789999999998764 789999999999999999999999976321 112222222111110 1
Q ss_pred hhhcchhccCCccccc-------chhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 517 MEIVDANLLSQKDEHF-------TTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 517 ~~~~d~~~~~~~~~~~-------~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
... ++.......+.. ......+.++.+|+.+||..||++||++.|+++|
T Consensus 282 ~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 282 REM-NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHH-CSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred Hhh-ChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 111 110000000000 0123456789999999999999999999999876
No 226
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=3.3e-40 Score=331.46 Aligned_cols=269 Identities=25% Similarity=0.304 Sum_probs=204.0
Q ss_pred HhcCCCcCceeccccCceEEEEEe--CCCCEEEEEEEecccc--chhhhHHHHHHHHhhc---CCCCcceEEeeee----
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARI--QDGMEVAVKVFDLQYG--RAFKSFDIECDMIKRI---RHRNIIKIISSCS---- 358 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~--~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~~~~~~~---- 358 (580)
..++|.+.+.||+|+||.||+|.. .+|+.||+|++..... .....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999987 3688999999865432 2234667788887776 8999999999986
Q ss_pred -cCCceeeEeeccCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccc
Q 038098 359 -SDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDF 436 (580)
Q Consensus 359 -~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Df 436 (580)
.....++||||++ |+|.+++.... ..+++..++.++.||+.||.||| +.+|+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecC
Confidence 5667899999997 59999987654 45899999999999999999999 899999999999999999999999999
Q ss_pred cCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhccc--
Q 038098 437 GMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPI-- 514 (580)
Q Consensus 437 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~-- 514 (580)
|+++..... .......||..|+|||.+.+..++.++|||||||++|||++|+.||...... ..+..........
T Consensus 165 g~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~ 240 (326)
T 1blx_A 165 GLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPGE 240 (326)
T ss_dssp CSCCCCCGG---GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCG
T ss_pred cccccccCC---CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHHcCCCCc
Confidence 999865322 1234456899999999999989999999999999999999999998753211 1111111110000
Q ss_pred -chhhhcc---hhccC-CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 515 -SVMEIVD---ANLLS-QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 515 -~~~~~~d---~~~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
....... ..... ...........++..+.+++.+||+.||++||++.|+++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000000 00000 0001111224567889999999999999999999999875
No 227
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=8.3e-41 Score=334.81 Aligned_cols=269 Identities=21% Similarity=0.262 Sum_probs=197.4
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeee-----------
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCS----------- 358 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~----------- 358 (580)
.++|...+.||+|+||.||+|... +|+.||+|++........+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 467889999999999999999876 58999999997665556678899999999999999999998873
Q ss_pred ---cCCceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeC-CCCcEEEc
Q 038098 359 ---SDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD-DNMVAHLS 434 (580)
Q Consensus 359 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~-~~~~~kl~ 434 (580)
.....++||||++ |+|.+++.. ..+++..++.++.||+.||+||| +.+|+||||||+||+++ +++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEc
Confidence 3467899999997 599998864 45899999999999999999999 89999999999999997 67799999
Q ss_pred cccCccccCCCCC-cccccccccCCCcCCcccccC-CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhc
Q 038098 435 DFGMAKPLLKEDQ-SLTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLL 512 (580)
Q Consensus 435 Dfg~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 512 (580)
|||+++....... ........+|..|+|||.+.. ..++.++|||||||++|||+||+.||...... ...........
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~ 242 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL-EQMQLILESIP 242 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHSC
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcC
Confidence 9999986533211 112234457899999998765 67899999999999999999999999763211 11111111110
Q ss_pred ccc---hhhh-------cchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 513 PIS---VMEI-------VDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 513 ~~~---~~~~-------~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
... ..+. +.................++.++.+++.+||+.||++||+++|+++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 000 0000 00000001111111223567889999999999999999999999875
No 228
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=2.5e-41 Score=338.58 Aligned_cols=261 Identities=22% Similarity=0.325 Sum_probs=201.4
Q ss_pred hcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEee
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 368 (580)
.++|.+.+.||+|+||.||+|...+ .||+|++.... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 4678899999999999999998763 59999986442 2334667789999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCC--
Q 038098 369 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED-- 446 (580)
Q Consensus 369 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-- 446 (580)
|+++++|.+++...+..+++..++.++.||+.||+||| +.+++||||||+||+++ ++.+||+|||+++......
T Consensus 110 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 110 LCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp CCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred cccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 99999999999887777999999999999999999999 89999999999999998 6799999999987543211
Q ss_pred -CcccccccccCCCcCCcccccC---------CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccch
Q 038098 447 -QSLTQTQTLATIGYMAPEYGRE---------GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISV 516 (580)
Q Consensus 447 -~~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 516 (580)
.........|+..|+|||.+.. ..++.++||||||+++|||++|+.||..... ......
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~------ 254 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA-----EAIIWQ------ 254 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH-----HHHHHH------
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHH------
Confidence 1122234458899999998864 3578899999999999999999999865311 111100
Q ss_pred hhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 038098 517 MEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSLLK 576 (580)
Q Consensus 517 ~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~~~ 576 (580)
+.. .... . .....++.++.+++.+||..||++||+++++++.|+++..+..+
T Consensus 255 --~~~-~~~~----~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~ 306 (319)
T 2y4i_B 255 --MGT-GMKP----N-LSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR 306 (319)
T ss_dssp --HHT-TCCC----C-CCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred --hcc-CCCC----C-CCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 000 0000 0 01123456688999999999999999999999999998876543
No 229
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.4e-40 Score=338.18 Aligned_cols=269 Identities=25% Similarity=0.279 Sum_probs=201.1
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecC-----Cce
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSD-----DFK 363 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~ 363 (580)
.++|.+.+.||+|+||.||+|... +|+.||||++.... ......+.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 467899999999999999999865 68999999996432 23345678899999999999999999987654 678
Q ss_pred eeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccC
Q 038098 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 443 (580)
Q Consensus 364 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 443 (580)
++||||+. |+|.+++... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999997 5999988763 5899999999999999999999 8999999999999999999999999999998664
Q ss_pred CCCCcc--------cccccccCCCcCCcccccC-CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhc-c
Q 038098 444 KEDQSL--------TQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLL-P 513 (580)
Q Consensus 444 ~~~~~~--------~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~-~ 513 (580)
...... ......||..|+|||.+.. ..++.++|||||||++|||++|+.||....... .+.......- +
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~ 242 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH-QLLLIFGIIGTP 242 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCC
Confidence 322111 1223468999999998754 678999999999999999999999997632110 0111100000 0
Q ss_pred c-----------chhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 514 I-----------SVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 514 ~-----------~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
. ...+.+.................++.++.+++.+||+.||++|||++|+++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred chhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0 0000000000000000111223567889999999999999999999999875
No 230
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.4e-40 Score=340.73 Aligned_cols=264 Identities=24% Similarity=0.320 Sum_probs=195.2
Q ss_pred cCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCC------ceee
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDD------FKAL 365 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~~~l 365 (580)
.+|...+.||+|+||.||+|+...+..||+|++.... ....+|+++++.++||||+++++++...+ ..++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 4688899999999999999998777779999885432 22346999999999999999999985433 3789
Q ss_pred EeeccCCCChHHHh--hcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeC-CCCcEEEccccCcccc
Q 038098 366 VLEYMPHGSLEKCL--YSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPL 442 (580)
Q Consensus 366 v~e~~~~g~L~~~l--~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~-~~~~~kl~Dfg~a~~~ 442 (580)
||||++++.+.... ......+++..+..++.||++||+||| +.+|+||||||+|||++ .++.+||+|||+|+..
T Consensus 116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 99999875443332 223457999999999999999999999 89999999999999999 8999999999999866
Q ss_pred CCCCCcccccccccCCCcCCcccccCC-CCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchh--hh
Q 038098 443 LKEDQSLTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVM--EI 519 (580)
Q Consensus 443 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~ 519 (580)
.... ......+|+.|+|||.+.+. .++.++||||+||++|||++|+.||.+.... ..+.......-..... ..
T Consensus 193 ~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 193 IAGE---PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp CTTC---CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHH
T ss_pred cCCC---CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHh
Confidence 3322 22345689999999988764 5899999999999999999999999763211 1122222111100000 00
Q ss_pred cchhccCC-----ccc--ccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 520 VDANLLSQ-----KDE--HFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 520 ~d~~~~~~-----~~~--~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.++..... ... ....+..++.++.+|+.+||+.||++|||+.|+++|
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 01110000 000 001123466789999999999999999999999986
No 231
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=5.8e-40 Score=331.41 Aligned_cols=265 Identities=20% Similarity=0.260 Sum_probs=203.3
Q ss_pred hcCCCcCceeccccCceEEEEEe-C-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCC------cceEEeeeecCCc
Q 038098 291 TNGFSENNLIGRGGFGSVYKARI-Q-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRN------IIKIISSCSSDDF 362 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~-~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~~ 362 (580)
.++|++.+.||+|+||.||+|.. . +|+.||||++... ......+..|+++++.++|++ ++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 35799999999999999999986 3 6889999998643 234567888999999987654 9999999999999
Q ss_pred eeeEeeccCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCC--------------
Q 038098 363 KALVLEYMPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD-------------- 427 (580)
Q Consensus 363 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~-------------- 427 (580)
.++||||+ +++|.+++...+ .++++..++.++.||++||+||| +.+|+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 889999987665 46899999999999999999999 899999999999999987
Q ss_pred -----CCcEEEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCc
Q 038098 428 -----NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDM 502 (580)
Q Consensus 428 -----~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~ 502 (580)
++.+||+|||+++..... .....||+.|+|||.+.+..++.++||||+||++|||++|+.||......+
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~- 241 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE- 241 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH-
T ss_pred cccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH-
Confidence 678999999999864322 234568999999999999899999999999999999999999997532111
Q ss_pred hHHHHHHhh--cccch-hhhcchhc---------------------cCCcccccchhhhhHHHHHHHHhhccCCCCCCCC
Q 038098 503 TLKHWVNDL--LPISV-MEIVDANL---------------------LSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRI 558 (580)
Q Consensus 503 ~~~~~~~~~--~~~~~-~~~~d~~~---------------------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp 558 (580)
......... .+... ........ .............++.++.+|+.+||+.||++||
T Consensus 242 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 321 (339)
T 1z57_A 242 HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRI 321 (339)
T ss_dssp HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccccc
Confidence 111111100 00000 00000000 0000001112234578899999999999999999
Q ss_pred CHHHHHHH
Q 038098 559 NAKEIVTR 566 (580)
Q Consensus 559 s~~ev~~~ 566 (580)
|++|+++|
T Consensus 322 t~~ell~h 329 (339)
T 1z57_A 322 TLREALKH 329 (339)
T ss_dssp CHHHHTTS
T ss_pred CHHHHhcC
Confidence 99999876
No 232
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=4.4e-40 Score=334.33 Aligned_cols=263 Identities=21% Similarity=0.259 Sum_probs=197.9
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc--chhhhHHHHHHHHhhcCCCCcceEEeeeecCCc-----
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG--RAFKSFDIECDMIKRIRHRNIIKIISSCSSDDF----- 362 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 362 (580)
.++|...+.||+|+||.||+|... +|+.||||++..... .....+.+|+.++++++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 367888999999999999999865 689999999965422 234678889999999999999999999977654
Q ss_pred -eeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccc
Q 038098 363 -KALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 441 (580)
Q Consensus 363 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~ 441 (580)
.++||||++ ++|.+++.. .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999997 588887643 4899999999999999999999 89999999999999999999999999999985
Q ss_pred cCCCCCcccccccccCCCcCCcccccC-CCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhh--cccc---
Q 038098 442 LLKEDQSLTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL--LPIS--- 515 (580)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~--~~~~--- 515 (580)
.... .....+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||...... ..+....... .+..
T Consensus 176 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 176 ADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp -------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH-HHHHHHHHHHCBCCHHHHT
T ss_pred CCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHH
Confidence 4221 234568999999998876 67899999999999999999999998753211 0111111100 0000
Q ss_pred ------hhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 516 ------VMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 516 ------~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
....+.................++.++.+++.+||+.||++|||++|+++|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000110000000001111224567889999999999999999999999875
No 233
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.4e-39 Score=331.66 Aligned_cols=275 Identities=21% Similarity=0.243 Sum_probs=193.2
Q ss_pred HHHHHHhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeecCCc-
Q 038098 285 LEIFQATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDF- 362 (580)
Q Consensus 285 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~- 362 (580)
.+.....++|.+.+.||+|+||.||+|... +|+.||||++.... ........+++.++.++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 345667789999999999999999999875 68999999985432 334566778888999999999999999865433
Q ss_pred ------eeeEeeccCCCChHHHhh---cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCC-CCcEE
Q 038098 363 ------KALVLEYMPHGSLEKCLY---SSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD-NMVAH 432 (580)
Q Consensus 363 ------~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~-~~~~k 432 (580)
.++||||+++ +|.+.+. .....+++..+..++.|++.|+.|||. ++.+|+||||||+||+++. ++.+|
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~~~ivH~Dlkp~NIll~~~~~~~k 172 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL-PSVNVCHRDIKPHNVLVNEADGTLK 172 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTS-TTTCCBCSCCCGGGEEEETTTTEEE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhC-CCCCeecCcCCHHHEEEeCCCCcEE
Confidence 7899999986 5554433 244568999999999999999999993 3678999999999999996 89999
Q ss_pred EccccCccccCCCCCcccccccccCCCcCCcccccCC-CCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhh
Q 038098 433 LSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDL 511 (580)
Q Consensus 433 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~ 511 (580)
|+|||+++...... ......||+.|+|||.+.+. .++.++|||||||++|||+||+.||..... ...+..+....
T Consensus 173 l~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-~~~~~~~~~~~ 248 (360)
T 3e3p_A 173 LCDFGSAKKLSPSE---PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS-AGQLHEIVRVL 248 (360)
T ss_dssp ECCCTTCBCCCTTS---CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHH
T ss_pred EeeCCCceecCCCC---CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh-HHHHHHHHHHc
Confidence 99999998664332 22345689999999988654 489999999999999999999999976321 11122222111
Q ss_pred ccc--chhhhcchhcc-----CCccc-----ccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 512 LPI--SVMEIVDANLL-----SQKDE-----HFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 512 ~~~--~~~~~~d~~~~-----~~~~~-----~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
... .....+++... ..... ........+.++.+|+.+||+.||++|||+.|+++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 249 GCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp CCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 100 01111111000 00000 001112357889999999999999999999999876
No 234
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=3.7e-40 Score=332.17 Aligned_cols=254 Identities=19% Similarity=0.226 Sum_probs=176.1
Q ss_pred HhcCCCcCc-eeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeeec----CCce
Q 038098 290 ATNGFSENN-LIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCSS----DDFK 363 (580)
Q Consensus 290 ~~~~~~~~~-~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~ 363 (580)
..++|.+.+ .||+|+||.||+|... +|+.||||++.... .........++.++||||+++++++.. ....
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 356788854 6999999999999876 79999999986431 222223334667799999999999875 4458
Q ss_pred eeEeeccCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCC---CCcEEEccccCc
Q 038098 364 ALVLEYMPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMA 439 (580)
Q Consensus 364 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~---~~~~kl~Dfg~a 439 (580)
++||||+++|+|.+++.... ..+++..++.++.||+.||.||| +.+|+||||||+||+++. ++.+||+|||++
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 99999999999999998664 46999999999999999999999 899999999999999986 455999999999
Q ss_pred cccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhh
Q 038098 440 KPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEI 519 (580)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (580)
+..... ......+|+.|+|||.+.+..++.++|||||||++|||++|+.||......... .. ....
T Consensus 179 ~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~---------~~~~ 244 (336)
T 3fhr_A 179 KETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS-PG---------MKRR 244 (336)
T ss_dssp EEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------
T ss_pred eecccc----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh-hh---------HHHh
Confidence 865322 223456899999999998888999999999999999999999998653221100 00 0000
Q ss_pred cchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 038098 520 VDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRL 567 (580)
Q Consensus 520 ~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L 567 (580)
+... ...........++.++.+|+.+||+.||++|||++|+++|-
T Consensus 245 ~~~~---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 289 (336)
T 3fhr_A 245 IRLG---QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHP 289 (336)
T ss_dssp ---------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred hhcc---ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 0000 00001112245678899999999999999999999999853
No 235
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=341.84 Aligned_cols=268 Identities=21% Similarity=0.240 Sum_probs=183.5
Q ss_pred CCCc-CceeccccCceEEEEEeC---CCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCcceEEeeee--cCCceeeE
Q 038098 293 GFSE-NNLIGRGGFGSVYKARIQ---DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNIIKIISSCS--SDDFKALV 366 (580)
Q Consensus 293 ~~~~-~~~lg~G~~g~v~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~lv 366 (580)
.|.+ .++||+|+||.||+|++. +++.||||++... .....+.+|++++++++||||+++++++. .....++|
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 3554 458999999999999865 5788999998643 23357889999999999999999999994 46788999
Q ss_pred eeccCCCChHHHhhcCC--------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEe----CCCCcEEEc
Q 038098 367 LEYMPHGSLEKCLYSSN--------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL----DDNMVAHLS 434 (580)
Q Consensus 367 ~e~~~~g~L~~~l~~~~--------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill----~~~~~~kl~ 434 (580)
|||+++ +|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+|||+ +.++.+||+
T Consensus 99 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~ 174 (405)
T 3rgf_A 99 FDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIA 174 (405)
T ss_dssp EECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred EeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence 999965 8888775321 35899999999999999999999 8999999999999999 778999999
Q ss_pred cccCccccCCCCC-cccccccccCCCcCCcccccCC-CCCCchhhHhHHHHHHHHHhCCCCCCccccCC--------chH
Q 038098 435 DFGMAKPLLKEDQ-SLTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDEIFFGD--------MTL 504 (580)
Q Consensus 435 Dfg~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~--------~~~ 504 (580)
|||+|+.+..... ........||+.|+|||.+.+. .++.++||||+||++|||+||++||....... ..+
T Consensus 175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l 254 (405)
T 3rgf_A 175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 254 (405)
T ss_dssp CTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHH
T ss_pred ECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHH
Confidence 9999986643221 1223456789999999998774 58999999999999999999999997532210 111
Q ss_pred HHHHHhhcccc---hhhh------------cchhccCCccc---ccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 505 KHWVNDLLPIS---VMEI------------VDANLLSQKDE---HFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 505 ~~~~~~~~~~~---~~~~------------~d~~~~~~~~~---~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.......-... +..+ +.......... ........+.++.+|+.+||+.||++|||++|+++|
T Consensus 255 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 255 DRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 11111100000 0000 00000000000 000001125678899999999999999999999976
No 236
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=343.16 Aligned_cols=250 Identities=22% Similarity=0.350 Sum_probs=190.2
Q ss_pred cCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhc-CCCCcceEEeeeecCCceeeEeecc
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRI-RHRNIIKIISSCSSDDFKALVLEYM 370 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 370 (580)
.+|...++||+|+||+||.....+|+.||||++.... ...+.+|+++++++ +||||+++++++.+.+..++||||+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 4588889999999999776556679999999986432 23467899999999 7999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCC-----CCcEEEccccCccccCCC
Q 038098 371 PHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD-----NMVAHLSDFGMAKPLLKE 445 (580)
Q Consensus 371 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~-----~~~~kl~Dfg~a~~~~~~ 445 (580)
. |+|.+++........+..++.++.||++||+||| +.+|+||||||+||+++. ...+||+|||+++.....
T Consensus 101 ~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 101 A-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp S-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred C-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 6 5999999877766666677899999999999999 899999999999999953 335889999999866433
Q ss_pred CCc-ccccccccCCCcCCccccc---CCCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCchHHHHHHhhcccchhhhc
Q 038098 446 DQS-LTQTQTLATIGYMAPEYGR---EGQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDMTLKHWVNDLLPISVMEIV 520 (580)
Q Consensus 446 ~~~-~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (580)
... .......||+.|+|||.+. ...++.++||||+||++|||+| |..||...... .... ..
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~---~~~~-----------~~ 242 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR---QANI-----------LL 242 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH---HHHH-----------HT
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH---HHHH-----------Hh
Confidence 211 2234567999999999987 4567889999999999999999 89998542110 0000 00
Q ss_pred chhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 521 DANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 521 d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
.. ............+..+.+|+.+||+.||++||+++|+++|
T Consensus 243 ~~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 243 GA----CSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp TC----CCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cc----CCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 00 0000111123345668899999999999999999999964
No 237
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=5.6e-40 Score=342.19 Aligned_cols=251 Identities=23% Similarity=0.335 Sum_probs=187.8
Q ss_pred CCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhc-CCCCcceEEeeeecCCceeeEeeccC
Q 038098 293 GFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRI-RHRNIIKIISSCSSDDFKALVLEYMP 371 (580)
Q Consensus 293 ~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 371 (580)
.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+.+..++||||++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 34556889999999998776677999999998643 235678899999887 89999999999999999999999996
Q ss_pred CCChHHHhhcCCCC------CCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCC-------------CcEE
Q 038098 372 HGSLEKCLYSSNYI------LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN-------------MVAH 432 (580)
Q Consensus 372 ~g~L~~~l~~~~~~------~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~-------------~~~k 432 (580)
|+|.+++...... .++..++.++.||+.||+||| +.+|+||||||+|||++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 5999999765421 133345789999999999999 8999999999999999754 4899
Q ss_pred EccccCccccCCCCCcc--cccccccCCCcCCcccccC-------CCCCCchhhHhHHHHHHHHHh-CCCCCCccccCCc
Q 038098 433 LSDFGMAKPLLKEDQSL--TQTQTLATIGYMAPEYGRE-------GQVSTNGDVYSFGIMLMETFT-RKKPTDEIFFGDM 502 (580)
Q Consensus 433 l~Dfg~a~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-------~~~~~~~Dvws~Gvil~ellt-g~~p~~~~~~~~~ 502 (580)
|+|||+++......... ......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||+.....
T Consensus 169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-- 246 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR-- 246 (434)
T ss_dssp ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH--
T ss_pred EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh--
Confidence 99999998764432211 1234579999999999865 678999999999999999999 99998653211
Q ss_pred hHHHHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 503 TLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
...+..... ............++.++.+++.+||+.||++||++.|+++|
T Consensus 247 -~~~i~~~~~-------------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 247 -ESNIIRGIF-------------SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp -HHHHHHTCC-------------CCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -HHHHhcCCC-------------CcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 111111100 00000111223567889999999999999999999999874
No 238
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=4.7e-40 Score=330.46 Aligned_cols=253 Identities=24% Similarity=0.294 Sum_probs=180.0
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc-chhhhHHHHHH-HHhhcCCCCcceEEeeeecCCceeeEee
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG-RAFKSFDIECD-MIKRIRHRNIIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e 368 (580)
++|...+.||+|+||.||+|... +|+.||||++..... .....+..|+. +++.++||||+++++++...+..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 67888999999999999999875 789999999975432 23344555665 6777899999999999999999999999
Q ss_pred ccCCCChHHHhhc----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEEecCCCCCEEeCCCCcEEEccccCccccC
Q 038098 369 YMPHGSLEKCLYS----SNYILDIFQRLNIMIDVASALEYLHFGYSV-PIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 443 (580)
Q Consensus 369 ~~~~g~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~-~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 443 (580)
|+++ +|.+++.. ....+++..+..++.|++.||.||| +. +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 9985 88777653 2456899999999999999999999 77 99999999999999999999999999998653
Q ss_pred CCCCcccccccccCCCcCCcccc----cCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhh
Q 038098 444 KEDQSLTQTQTLATIGYMAPEYG----REGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEI 519 (580)
Q Consensus 444 ~~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (580)
... ......||..|+|||.+ .+..++.++|||||||++|||++|+.||....... .. ...+
T Consensus 178 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~--------~~~~ 242 (327)
T 3aln_A 178 DSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF----DQ--------LTQV 242 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------------------CCC
T ss_pred ccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH----HH--------HHHH
Confidence 322 22334689999999998 45678999999999999999999999986521100 00 0011
Q ss_pred cchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 520 VDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 520 ~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
..... ..........++..+.+++.+||+.||++||++.|++++
T Consensus 243 ~~~~~---~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 243 VKGDP---PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCSCC---CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred hcCCC---CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 11000 000011123467789999999999999999999999886
No 239
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.7e-39 Score=331.91 Aligned_cols=199 Identities=25% Similarity=0.331 Sum_probs=170.2
Q ss_pred HhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcC-CC-----CcceEEeeeecCCc
Q 038098 290 ATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIR-HR-----NIIKIISSCSSDDF 362 (580)
Q Consensus 290 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~~~~~~~~~~~ 362 (580)
..++|.+.+.||+|+||.||+|... +++.||||++... ......+..|+++++.++ |+ +++++++++...+.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 3578999999999999999999865 6889999999643 223456777888888885 44 49999999999999
Q ss_pred eeeEeeccCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeC--CCCcEEEccccCc
Q 038098 363 KALVLEYMPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD--DNMVAHLSDFGMA 439 (580)
Q Consensus 363 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~--~~~~~kl~Dfg~a 439 (580)
.++||||++ |+|.+++.... ..+++..+..++.||+.||.|||. +..+|+||||||+|||++ .++.+||+|||++
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 999999996 59999988765 568999999999999999999992 146899999999999994 5788999999999
Q ss_pred cccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCc
Q 038098 440 KPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDE 496 (580)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~ 496 (580)
+..... .....||+.|+|||.+.+..++.++|||||||++|||+||+.||..
T Consensus 209 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 209 CQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp EETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 866322 2345689999999999999999999999999999999999999975
No 240
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=6.4e-40 Score=328.13 Aligned_cols=252 Identities=21% Similarity=0.274 Sum_probs=183.1
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccc-h-hhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGR-A-FKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~-~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
.++|...+.||+|+||.||+|... +|+.||||++...... . ...+..+..+++.++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 367888899999999999999875 7899999999754322 2 233444555678889999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEEecCCCCCEEeCCCCcEEEccccCccccCCCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV-PIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED 446 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~-~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 446 (580)
||+ ++.+..+.......+++..++.++.||+.||.||| +. +++||||||+||+++.++.+||+|||++.......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 55666666555567999999999999999999999 75 99999999999999999999999999997653322
Q ss_pred CcccccccccCCCcCCccccc-----CCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcc
Q 038098 447 QSLTQTQTLATIGYMAPEYGR-----EGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVD 521 (580)
Q Consensus 447 ~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 521 (580)
......+|+.|+|||.+. ...++.++|||||||++|||++|+.||...... ...+ . .+..
T Consensus 180 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~-~--------~~~~ 244 (318)
T 2dyl_A 180 ---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD---FEVL-T--------KVLQ 244 (318)
T ss_dssp ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH---HHHH-H--------HHHH
T ss_pred ---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc---HHHH-H--------HHhc
Confidence 223446899999999984 557889999999999999999999998652111 1111 0 0110
Q ss_pred hhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 522 ANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
. ..........++.++.+++.+||+.||++||+++|+++|
T Consensus 245 ~-----~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 245 E-----EPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp S-----CCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred c-----CCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0 001111123456789999999999999999999999986
No 241
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=4.2e-40 Score=329.60 Aligned_cols=243 Identities=23% Similarity=0.293 Sum_probs=201.1
Q ss_pred HHhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccccc------hhhhHHHHHHHHhhcC--CCCcceEEeeeec
Q 038098 289 QATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYGR------AFKSFDIECDMIKRIR--HRNIIKIISSCSS 359 (580)
Q Consensus 289 ~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~niv~~~~~~~~ 359 (580)
...++|.+.+.||+|+||.||+|... +++.||||++...... ....+..|+.++++++ |+||+++++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 34577999999999999999999854 6899999999755321 2356778999999996 5999999999999
Q ss_pred CCceeeEeeccCC-CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeC-CCCcEEEcccc
Q 038098 360 DDFKALVLEYMPH-GSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFG 437 (580)
Q Consensus 360 ~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~-~~~~~kl~Dfg 437 (580)
.+..++|+|++.+ ++|.+++... ..+++..++.++.||+.||+||| +.+|+||||||+||+++ .++.+||+|||
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred CCcEEEEEEcCCCCccHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 9999999999976 8999998764 35899999999999999999999 89999999999999999 78999999999
Q ss_pred CccccCCCCCcccccccccCCCcCCcccccCCCC-CCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccch
Q 038098 438 MAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQV-STNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISV 516 (580)
Q Consensus 438 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 516 (580)
+++..... ......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||.... .
T Consensus 196 ~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~---------- 254 (320)
T 3a99_A 196 SGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------E---------- 254 (320)
T ss_dssp TCEECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------H----------
T ss_pred cccccccc----cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------h----------
Confidence 99866432 2234568999999999877665 688999999999999999999986520 0
Q ss_pred hhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 517 MEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 517 ~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
..... ...+..++.++.+++.+||+.||++||+++|++++
T Consensus 255 --~~~~~--------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 255 --IIRGQ--------VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp --HHHCC--------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --hhccc--------ccccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 01123456778999999999999999999999875
No 242
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.4e-39 Score=329.07 Aligned_cols=264 Identities=20% Similarity=0.250 Sum_probs=200.1
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CC-CEEEEEEEeccccchhhhHHHHHHHHhhcCCCC------cceEEeeeecCCc
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DG-MEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRN------IIKIISSCSSDDF 362 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~~ 362 (580)
.++|.+.+.||+|+||.||+|... ++ +.||+|++... ......+..|++++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 367999999999999999999864 44 68999998643 234567788999999997766 8999999999999
Q ss_pred eeeEeeccCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEe----------------
Q 038098 363 KALVLEYMPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL---------------- 425 (580)
Q Consensus 363 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill---------------- 425 (580)
.++||||+ ++++.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 567777666544 57999999999999999999999 9999999999999999
Q ss_pred ---CCCCcEEEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCc
Q 038098 426 ---DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDM 502 (580)
Q Consensus 426 ---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~ 502 (580)
+.++.+||+|||+++..... .....||+.|+|||.+.+..++.++||||+||++|||++|+.||......
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-- 245 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR-- 245 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--
T ss_pred ccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--
Confidence 56789999999999854322 23456899999999999999999999999999999999999999753211
Q ss_pred hHHHHHHhhcccchhhhcc----hhc---------------------cCCcccccchhhhhHHHHHHHHhhccCCCCCCC
Q 038098 503 TLKHWVNDLLPISVMEIVD----ANL---------------------LSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQR 557 (580)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~d----~~~---------------------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 557 (580)
................... ... ..............+.++.+|+.+||+.||++|
T Consensus 246 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 325 (355)
T 2eu9_A 246 EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQR 325 (355)
T ss_dssp HHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhC
Confidence 1111111111000000000 000 000000011123346789999999999999999
Q ss_pred CCHHHHHHH
Q 038098 558 INAKEIVTR 566 (580)
Q Consensus 558 ps~~ev~~~ 566 (580)
||++|+++|
T Consensus 326 pt~~e~l~h 334 (355)
T 2eu9_A 326 ITLAEALLH 334 (355)
T ss_dssp CCHHHHTTS
T ss_pred cCHHHHhcC
Confidence 999999865
No 243
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.1e-40 Score=327.42 Aligned_cols=244 Identities=25% Similarity=0.339 Sum_probs=193.2
Q ss_pred HHHhcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc------chhhhHHHHHHHHhhc----CCCCcceEEee
Q 038098 288 FQATNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG------RAFKSFDIECDMIKRI----RHRNIIKIISS 356 (580)
Q Consensus 288 ~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l----~h~niv~~~~~ 356 (580)
....++|.+.+.||+|+||.||+|... +++.||||++..... .....+..|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 344578999999999999999999864 689999999864422 1234556799999998 89999999999
Q ss_pred eecCCceeeEeec-cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeC-CCCcEEEc
Q 038098 357 CSSDDFKALVLEY-MPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD-DNMVAHLS 434 (580)
Q Consensus 357 ~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~-~~~~~kl~ 434 (580)
+...+..++|+|+ +.+++|.+++...+ .+++..++.++.||++||+||| +.+|+||||||+||+++ .++.+||+
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~ 182 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLI 182 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEEC
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEEE
Confidence 9999999999999 78999999987644 5899999999999999999999 89999999999999999 89999999
Q ss_pred cccCccccCCCCCcccccccccCCCcCCcccccCCCCC-CchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcc
Q 038098 435 DFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVS-TNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLP 513 (580)
Q Consensus 435 Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 513 (580)
|||+++...... .....|+..|+|||.+.+..+. .++||||+|+++|||++|+.||....
T Consensus 183 dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------------- 243 (312)
T 2iwi_A 183 DFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ--------------- 243 (312)
T ss_dssp CCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---------------
T ss_pred EcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH---------------
Confidence 999998664322 2345689999999998776664 58999999999999999999986420
Q ss_pred cchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 514 ISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 514 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
++.+. ....+..++.++.+++.+||+.||++||+++|+++|
T Consensus 244 ----~~~~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 244 ----EILEA--------ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ----HHHHT--------CCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----HHhhh--------ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01110 011123456778999999999999999999999985
No 244
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1e-39 Score=334.38 Aligned_cols=265 Identities=19% Similarity=0.242 Sum_probs=199.0
Q ss_pred cCCCcCceeccccCceEEEEEe-CCCCEEEEEEEeccccchhhhHHHHHHHHhhcC-----------CCCcceEEeeeec
Q 038098 292 NGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIR-----------HRNIIKIISSCSS 359 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~~~~~~~~ 359 (580)
++|.+.+.||+|+||.||+|.. .+++.||||++.... .....+..|++++++++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 5789999999999999999986 478999999986432 23466788999999886 8999999999876
Q ss_pred CC----ceeeEeeccCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEEecCCCCCEEeC------C
Q 038098 360 DD----FKALVLEYMPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSV-PIIHCDLKPSNVLLD------D 427 (580)
Q Consensus 360 ~~----~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~-~i~H~dlk~~Nill~------~ 427 (580)
.+ ..++||||+ +++|.+++.... ..+++..++.++.||+.||+||| +. +|+||||||+||+++ .
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTTT
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCcC
Confidence 44 789999999 889999987643 45999999999999999999999 87 999999999999994 4
Q ss_pred CCcEEEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCC-----c
Q 038098 428 NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGD-----M 502 (580)
Q Consensus 428 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~-----~ 502 (580)
.+.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||++|||+||+.||....... .
T Consensus 174 ~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 248 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD 248 (373)
T ss_dssp EEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHH
T ss_pred cceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHH
Confidence 458999999999865322 233468999999999999999999999999999999999999997532111 0
Q ss_pred hHHHHHHhhc--ccch-------hhhcchh-ccCC------------cccccchhhhhHHHHHHHHhhccCCCCCCCCCH
Q 038098 503 TLKHWVNDLL--PISV-------MEIVDAN-LLSQ------------KDEHFTTKGQCVSFIFNLAMKCTVESPEQRINA 560 (580)
Q Consensus 503 ~~~~~~~~~~--~~~~-------~~~~d~~-~~~~------------~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~ 560 (580)
.+.......- +... ...++.. .... .......+..++.++.+|+.+||+.||++|||+
T Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 328 (373)
T 1q8y_A 249 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA 328 (373)
T ss_dssp HHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred HHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCH
Confidence 1111111000 0000 0000000 0000 000112335678889999999999999999999
Q ss_pred HHHHHH
Q 038098 561 KEIVTR 566 (580)
Q Consensus 561 ~ev~~~ 566 (580)
+|+++|
T Consensus 329 ~ell~h 334 (373)
T 1q8y_A 329 GGLVNH 334 (373)
T ss_dssp HHHHTC
T ss_pred HHHhhC
Confidence 999875
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=4.3e-39 Score=344.64 Aligned_cols=264 Identities=25% Similarity=0.317 Sum_probs=200.2
Q ss_pred hcCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeec------CCc
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSS------DDF 362 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~ 362 (580)
.++|.+.+.||+|+||.||+|... +|+.||||++.... ......+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 368999999999999999999864 68999999986542 3345678899999999999999999998765 677
Q ss_pred eeeEeeccCCCChHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCc---EEEcccc
Q 038098 363 KALVLEYMPHGSLEKCLYSSN--YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMV---AHLSDFG 437 (580)
Q Consensus 363 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~---~kl~Dfg 437 (580)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 899999999999999998654 36899999999999999999999 899999999999999997665 9999999
Q ss_pred CccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchh
Q 038098 438 MAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVM 517 (580)
Q Consensus 438 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 517 (580)
++....... ......||..|+|||.+.+..++.++||||+||++|||++|+.||... .....|..........
T Consensus 170 ~a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~----~~~~~~~~~i~~~~~~ 242 (676)
T 3qa8_A 170 YAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN----WQPVQWHGKVREKSNE 242 (676)
T ss_dssp CCCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSS----CHHHHSSTTCC-----
T ss_pred ccccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcc----cchhhhhhhhhcccch
Confidence 998664322 223457999999999999999999999999999999999999998652 2223332222111111
Q ss_pred hh-cchhccC------CcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHH
Q 038098 518 EI-VDANLLS------QKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIV 564 (580)
Q Consensus 518 ~~-~d~~~~~------~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~ 564 (580)
.. ....... ............+..+.+++.+||..||++|||++|++
T Consensus 243 ~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp -CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred hhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 00 0000000 00001122345788999999999999999999998844
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=5.7e-38 Score=308.37 Aligned_cols=233 Identities=15% Similarity=0.080 Sum_probs=185.6
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEecccc---chhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeEe
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG---RAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 367 (580)
++|++.+.||+|+||.||+|... +|+.||||++..... .....+.+|+.++++++||||+++++++...+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 57999999999999999999875 589999999975432 23467889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 447 (580)
||+++++|.+++... ....++.+++.||+.||+||| +.+|+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~---------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA---------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC----------
T ss_pred EecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc----------
Confidence 999999999998542 355678899999999999999 8999999999999999999999998543
Q ss_pred cccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCC
Q 038098 448 SLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQ 527 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 527 (580)
|++ .++.++|||||||++|||+||+.||........ +. .........
T Consensus 175 ------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-~~-------------~~~~~~~~~ 221 (286)
T 3uqc_A 175 ------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSG-LA-------------PAERDTAGQ 221 (286)
T ss_dssp ------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC-SE-------------ECCBCTTSC
T ss_pred ------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchh-hH-------------HHHHHhccC
Confidence 333 367899999999999999999999976322110 00 000000000
Q ss_pred cccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 038098 528 KDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTRLLKIRDSL 574 (580)
Q Consensus 528 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~L~~~~~~~ 574 (580)
..........++.++.+++.+||+.||++| |+.|+++.|+++....
T Consensus 222 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 222 PIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp BCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred CCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 000111224567789999999999999999 9999999999987554
No 247
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.9e-38 Score=328.38 Aligned_cols=249 Identities=16% Similarity=0.152 Sum_probs=186.3
Q ss_pred cCCCcCceeccccCceEEEEEeC-CCCEEEEEEEeccc---cchhhhHHHHHHHHhhcCC-CCcceE-------------
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQY---GRAFKSFDIECDMIKRIRH-RNIIKI------------- 353 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h-~niv~~------------- 353 (580)
..|...+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|+.+++.++| +|....
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 34667789999999999999854 79999999986332 2336778899999999987 322111
Q ss_pred --------Eeeeec-----CCceeeEeeccCCCChHHHhh------cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeE
Q 038098 354 --------ISSCSS-----DDFKALVLEYMPHGSLEKCLY------SSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 414 (580)
Q Consensus 354 --------~~~~~~-----~~~~~lv~e~~~~g~L~~~l~------~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~ 414 (580)
..++.. ....+++|+++ +++|.+++. ..+..+++..++.++.||++||+||| +.+|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence 111111 12356777766 679999884 23456888999999999999999999 99999
Q ss_pred EecCCCCCEEeCCCCcEEEccccCccccCCCCCcccccccccCCCcCCcccc----------cCCCCCCchhhHhHHHHH
Q 038098 415 HCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYG----------REGQVSTNGDVYSFGIML 484 (580)
Q Consensus 415 H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~----------~~~~~~~~~Dvws~Gvil 484 (580)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 9999999999999999999999999854322 334467 999999998 556688999999999999
Q ss_pred HHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHH
Q 038098 485 METFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIV 564 (580)
Q Consensus 485 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~ 564 (580)
|||+||+.||......+ ..+.. +.....++.++.+|+.+||+.||++||++.|++
T Consensus 308 ~elltg~~Pf~~~~~~~-----------------~~~~~--------~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALG-----------------GSEWI--------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHHHHSSCCCCTTGGGS-----------------CSGGG--------GSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HHHHHCCCCCCCcchhh-----------------hHHHH--------HhhcccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 99999999997532110 01110 011123457799999999999999999999997
Q ss_pred HH--HHHHHHHHH
Q 038098 565 TR--LLKIRDSLL 575 (580)
Q Consensus 565 ~~--L~~~~~~~~ 575 (580)
++ ++++...+.
T Consensus 363 ~~~~~~~~~~~~~ 375 (413)
T 3dzo_A 363 ETPEYEQLRTELS 375 (413)
T ss_dssp TSHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHH
Confidence 76 555555543
No 248
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4e-38 Score=346.72 Aligned_cols=242 Identities=22% Similarity=0.317 Sum_probs=195.8
Q ss_pred cCCCcCceeccccCceEEEEEeC--CCCEEEEEEEeccc-cchhhhHHHHHHHHhhcCCCCcceEEeeeecCCc-----e
Q 038098 292 NGFSENNLIGRGGFGSVYKARIQ--DGMEVAVKVFDLQY-GRAFKSFDIECDMIKRIRHRNIIKIISSCSSDDF-----K 363 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g~v~~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-----~ 363 (580)
++|.+.+.||+|+||.||+|.+. +|+.||||++.... ......+..|++++++++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 67999999999999999999875 58999999985432 2344678899999999999999999999987665 6
Q ss_pred eeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccC
Q 038098 364 ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 443 (580)
Q Consensus 364 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 443 (580)
++||||+++++|.+++.. .+++..++.++.||++||.||| +.+|+||||||+||+++.+ .+||+|||+++...
T Consensus 160 ~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp EEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred EEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 999999999999987654 6899999999999999999999 8999999999999999985 99999999998653
Q ss_pred CCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchh
Q 038098 444 KEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDAN 523 (580)
Q Consensus 444 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 523 (580)
.. ....||+.|+|||++.++ ++.++|||||||++|||++|.+||........
T Consensus 233 ~~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~--------------------- 284 (681)
T 2pzi_A 233 SF------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL--------------------- 284 (681)
T ss_dssp CC------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC---------------------
T ss_pred cC------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccc---------------------
Confidence 32 345699999999988765 48999999999999999999988764211100
Q ss_pred ccCCcccccchhhhhHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHHHHHH
Q 038098 524 LLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRI-NAKEIVTRLLKIRDSL 574 (580)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-s~~ev~~~L~~~~~~~ 574 (580)
. ........+..+.+++.+||+.||++|| +++++.+.|..+..+.
T Consensus 285 -~-----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~ 330 (681)
T 2pzi_A 285 -P-----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREV 330 (681)
T ss_dssp -C-----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHH
T ss_pred -c-----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHh
Confidence 0 0011122346788999999999999999 5667777777766554
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.4e-37 Score=308.36 Aligned_cols=231 Identities=19% Similarity=0.260 Sum_probs=181.6
Q ss_pred hcCCCcC-ceeccccCceEEEEEe-CCCCEEEEEEEeccccchhhhHHHHHHHH-hhcCCCCcceEEeeeec----CCce
Q 038098 291 TNGFSEN-NLIGRGGFGSVYKARI-QDGMEVAVKVFDLQYGRAFKSFDIECDMI-KRIRHRNIIKIISSCSS----DDFK 363 (580)
Q Consensus 291 ~~~~~~~-~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~----~~~~ 363 (580)
.++|... +.||+|+||.||+|.. .+++.||+|++.. ...+.+|++++ +..+||||+++++++.. ....
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 3567666 7899999999999986 4789999999853 24567888887 55689999999999876 6778
Q ss_pred eeEeeccCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCC---CCcEEEccccCc
Q 038098 364 ALVLEYMPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMA 439 (580)
Q Consensus 364 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~---~~~~kl~Dfg~a 439 (580)
++||||+++|+|.+++.... ..+++..++.++.||+.||.||| +.+|+||||||+||+++. ++.+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 99999999999999998754 46999999999999999999999 899999999999999998 789999999998
Q ss_pred cccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccCCchHHHHHHhhcccchhhh
Q 038098 440 KPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEI 519 (580)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (580)
.... +..++.++||||+||++|||+||+.||........ ....
T Consensus 168 ~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-------------~~~~ 210 (299)
T 3m2w_A 168 KETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-------------SPGM 210 (299)
T ss_dssp EECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------------------CCS
T ss_pred cccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-------------hHHH
Confidence 7431 23467799999999999999999999865311100 0000
Q ss_pred cchhccCCcccccchhhhhHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 038098 520 VDANLLSQKDEHFTTKGQCVSFIFNLAMKCTVESPEQRINAKEIVTR 566 (580)
Q Consensus 520 ~d~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev~~~ 566 (580)
..................++.++.+++.+||+.||++||+++|+++|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 211 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp CCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00000000111111224567889999999999999999999999986
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=5.5e-37 Score=309.27 Aligned_cols=245 Identities=18% Similarity=0.185 Sum_probs=185.7
Q ss_pred hcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccc--------cchhhhHHHHHHHHhhcC---------CCCcceE
Q 038098 291 TNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQY--------GRAFKSFDIECDMIKRIR---------HRNIIKI 353 (580)
Q Consensus 291 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~---------h~niv~~ 353 (580)
.++|.+.+.||+|+||.||+|+. +|+.||||++.... ....+.+.+|++++++++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35688899999999999999998 58999999997542 223377889999999886 6666665
Q ss_pred Eee-----------------eec-------------CCceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHH
Q 038098 354 ISS-----------------CSS-------------DDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALE 403 (580)
Q Consensus 354 ~~~-----------------~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ 403 (580)
.+. +.+ .+..++||||+++|++.+.+.. ..+++..++.++.||+.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence 554 333 6789999999999977666643 45899999999999999999
Q ss_pred HHhcCCCCCeEEecCCCCCEEeCCCC--------------------cEEEccccCccccCCCCCcccccccccCCCcCCc
Q 038098 404 YLHFGYSVPIIHCDLKPSNVLLDDNM--------------------VAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 463 (580)
Q Consensus 404 ~Lh~~~~~~i~H~dlk~~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aP 463 (580)
|||+ +.+|+||||||+|||++.++ .+||+|||+|+.... ....||+.|+||
T Consensus 176 ~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y~aP 246 (336)
T 2vuw_A 176 VAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVSMDE 246 (336)
T ss_dssp HHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCTTCS
T ss_pred HHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeecccCh
Confidence 9992 36899999999999999887 999999999986532 134699999999
Q ss_pred ccccCCCCCCchhhHhHHHH-HHHHHhCCCCCCccccCCchHHHHHHhhcccchhhhcchhccCCcccccchhhhhHHHH
Q 038098 464 EYGREGQVSTNGDVYSFGIM-LMETFTRKKPTDEIFFGDMTLKHWVNDLLPISVMEIVDANLLSQKDEHFTTKGQCVSFI 542 (580)
Q Consensus 464 E~~~~~~~~~~~Dvws~Gvi-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l 542 (580)
|.+.+.. +.++||||+|++ .+++++|..||.. ..|.... ...+.+.. ..........+..++.++
T Consensus 247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~--------~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~s~~~ 312 (336)
T 2vuw_A 247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN--------VLWLHYL----TDKMLKQM-TFKTKCNTPAMKQIKRKI 312 (336)
T ss_dssp GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH--------HHHHHHH----HHHHHHTC-CCSSCCCSHHHHHHHHHH
T ss_pred hhhcCCC-ccceehhhhhCCCCcccccccCCCcc--------hhhhhHH----HHhhhhhh-ccCcccchhhhhhcCHHH
Confidence 9998655 899999998777 7789999999743 1121111 01111110 111111223345688999
Q ss_pred HHHHhhccCCCCCCCCCHHHHH-HH
Q 038098 543 FNLAMKCTVESPEQRINAKEIV-TR 566 (580)
Q Consensus 543 ~~l~~~cl~~dP~~Rps~~ev~-~~ 566 (580)
.+|+.+||+.| |++|++ +|
T Consensus 313 ~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 313 QEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHHhccC-----CHHHHHhcC
Confidence 99999999976 999998 64
No 251
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=2e-31 Score=265.39 Aligned_cols=215 Identities=35% Similarity=0.544 Sum_probs=186.3
Q ss_pred CccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCC-CCC
Q 038098 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLT-SIP 80 (580)
Q Consensus 2 N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~lp 80 (580)
|++++.+|.+|.++++|++|+|++|.+++.+|..|.++++|++|+|++|.+++..|..|..+++|++|+|++|+|+ .+|
T Consensus 87 n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 166 (313)
T 1ogq_A 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166 (313)
T ss_dssp TTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECC
T ss_pred CcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCC
Confidence 6777788888888888888888888887778888888888888888888888778888888888888888888887 577
Q ss_pred CCCcCCC-CCceEeCcCCccc------ccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCccccccc
Q 038098 81 STLWNLK-DILYLDLSSNFLL------IGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLI 153 (580)
Q Consensus 81 ~~~~~l~-~L~~L~l~~n~l~------~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 153 (580)
..+..++ +|++|+|++|++. +..++ |+.|++++|.+++..+..|..+++|+.|+|++|.+++.+|. +..++
T Consensus 167 ~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~ 244 (313)
T 1ogq_A 167 DSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSK 244 (313)
T ss_dssp GGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCT
T ss_pred HHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccC
Confidence 7788777 8888888888872 45555 88999999999888888899999999999999999866655 88889
Q ss_pred ccccccccccccCCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCCCccccCCCC
Q 038098 154 NLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNELLCGMPN 218 (580)
Q Consensus 154 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~c~~p~ 218 (580)
+|++|+|++|++++.+|..+..+++|+.|++++|++++.+|....++.+..+++.+|++.|+.|.
T Consensus 245 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 245 NLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp TCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTS
T ss_pred CCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCC
Confidence 99999999999999999999999999999999999999999888899999999999999999774
No 252
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.97 E-value=2.5e-30 Score=288.82 Aligned_cols=224 Identities=37% Similarity=0.598 Sum_probs=193.3
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCC-CC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLT-SI 79 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~l 79 (580)
+|++++.+|..|..+++|++|+|++|.+++.+|..+.++++|++|+|++|++++..|..|+.+++|++|+|++|+++ .+
T Consensus 451 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 530 (768)
T 3rgz_A 451 LNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNI 530 (768)
T ss_dssp SSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEEC
T ss_pred CCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcC
Confidence 46777777777777888888888888887777888888888888888888888778888888888888888888887 47
Q ss_pred CCCCcCCCCCceEeCcCCccc-----------------------------------------------------------
Q 038098 80 PSTLWNLKDILYLDLSSNFLL----------------------------------------------------------- 100 (580)
Q Consensus 80 p~~~~~l~~L~~L~l~~n~l~----------------------------------------------------------- 100 (580)
|..+..+++|++|+|++|++.
T Consensus 531 p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 610 (768)
T 3rgz_A 531 PAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTR 610 (768)
T ss_dssp CGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGT
T ss_pred CHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccc
Confidence 777888888888888888762
Q ss_pred -----------------ccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCccccccccccccccccc
Q 038098 101 -----------------IGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNN 163 (580)
Q Consensus 101 -----------------~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N 163 (580)
+..+++|+.|+|++|++++.+|..|+.++.|+.|+|++|.++|.+|..|..+++|+.|||++|
T Consensus 611 ~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N 690 (768)
T 3rgz_A 611 NPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSN 690 (768)
T ss_dssp CCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS
T ss_pred cccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCC
Confidence 122467899999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCCCccccCCCCCCCCCCCCc
Q 038098 164 NLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNELLCGMPNLQVPPCRTR 227 (580)
Q Consensus 164 ~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~c~~p~~~~~~c~~~ 227 (580)
++++.+|..+..+++|+.|++++|+++|.+|....+..+...++.||+..|+.|. ++|...
T Consensus 691 ~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l---~~C~~~ 751 (768)
T 3rgz_A 691 KLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL---PRCDPS 751 (768)
T ss_dssp CCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTS---CCCCSC
T ss_pred cccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCC---cCCCCC
Confidence 9999999999999999999999999999999998899999999999999999874 367543
No 253
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=8.2e-31 Score=280.43 Aligned_cols=185 Identities=19% Similarity=0.113 Sum_probs=131.4
Q ss_pred eccccCceEEEEE-eCCCCEEEEEEEeccc----------cchhhhHHHHHHHHhhc-CCCCcceEEeeeecCCceeeEe
Q 038098 300 IGRGGFGSVYKAR-IQDGMEVAVKVFDLQY----------GRAFKSFDIECDMIKRI-RHRNIIKIISSCSSDDFKALVL 367 (580)
Q Consensus 300 lg~G~~g~v~~~~-~~~~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 367 (580)
.+.|+.|.+..++ ...|+.||+|++.... ....+++.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4556666665554 3458999999996542 12345688999999999 7999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCC
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQ 447 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 447 (580)
||++|++|.+++...+ +++.. +|+.||++||+|+| +.|||||||||+|||++.+|.+||+|||+|+.......
T Consensus 322 Eyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~ 394 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS 394 (569)
T ss_dssp ECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---C
T ss_pred ecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCc
Confidence 9999999999997654 46654 58999999999999 99999999999999999999999999999986643322
Q ss_pred cccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCC
Q 038098 448 SLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPT 494 (580)
Q Consensus 448 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~ 494 (580)
.....+||++|||||++.+ .+..++|+||+|++++++.++..++
T Consensus 395 --~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 395 --WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp --CSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred --cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 2345679999999999864 5678899999999998887766553
No 254
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=2.5e-28 Score=256.06 Aligned_cols=215 Identities=26% Similarity=0.297 Sum_probs=197.5
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP 80 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp 80 (580)
+|+|+++.|.+|.++++|++|+|++|.|++..|+.|.++++|++|+|++|.|+.+.+..|.++++|++|+|++|+|+.+|
T Consensus 84 ~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 163 (452)
T 3zyi_A 84 ENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIP 163 (452)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEEC
T ss_pred CCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeC
Confidence 58899999999999999999999999999888899999999999999999999888888999999999999999999987
Q ss_pred C-CCcCCCCCceEeCcCCc-c------cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccc
Q 038098 81 S-TLWNLKDILYLDLSSNF-L------LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDL 152 (580)
Q Consensus 81 ~-~~~~l~~L~~L~l~~n~-l------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 152 (580)
. .+.++++|++|+|++|. + .+.++++|+.|+|++|.++++ ..+..+++|+.|+|++|.|++..|..|..+
T Consensus 164 ~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 241 (452)
T 3zyi_A 164 SYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM--PNLTPLVGLEELEMSGNHFPEIRPGSFHGL 241 (452)
T ss_dssp TTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC--CCCTTCTTCCEEECTTSCCSEECGGGGTTC
T ss_pred HhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc--ccccccccccEEECcCCcCcccCcccccCc
Confidence 6 67789999999999854 4 377899999999999999976 358889999999999999998889999999
Q ss_pred cccccccccccccCCCccccccccCcccEEEccCCcccCCCCCC-CCCccCccccCCCCccccCCC
Q 038098 153 INLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNK-GPFRNFSTESFEGNELLCGMP 217 (580)
Q Consensus 153 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~~~~~~n~~~c~~p 217 (580)
++|+.|+|++|++++..+..|..+++|+.|++++|++++.++.. ..++++..+++.+|+|.|++.
T Consensus 242 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 242 SSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred cCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 99999999999999888999999999999999999999888765 568889999999999999865
No 255
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=3.2e-28 Score=254.34 Aligned_cols=215 Identities=24% Similarity=0.293 Sum_probs=197.5
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP 80 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp 80 (580)
+|+|+++.+.+|.++++|++|+|++|.|+.+.++.|.++++|++|+|++|+|+.+.+..|..+++|++|+|++|+|+.+|
T Consensus 73 ~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~ 152 (440)
T 3zyj_A 73 ENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIP 152 (440)
T ss_dssp SCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEEC
T ss_pred CCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccC
Confidence 58899888899999999999999999999888899999999999999999999888889999999999999999999987
Q ss_pred C-CCcCCCCCceEeCcCCc-c------cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccc
Q 038098 81 S-TLWNLKDILYLDLSSNF-L------LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDL 152 (580)
Q Consensus 81 ~-~~~~l~~L~~L~l~~n~-l------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 152 (580)
. .+..+++|++|+|++|. + .+.++++|+.|+|++|.++.++ .+..+++|+.|+|++|.|++..|..|..+
T Consensus 153 ~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 230 (440)
T 3zyj_A 153 SYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP--NLTPLIKLDELDLSGNHLSAIRPGSFQGL 230 (440)
T ss_dssp TTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCC--CCTTCSSCCEEECTTSCCCEECTTTTTTC
T ss_pred HHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcccc--ccCCCcccCEEECCCCccCccChhhhccC
Confidence 6 67789999999999954 3 4778999999999999999663 58899999999999999998889999999
Q ss_pred cccccccccccccCCCccccccccCcccEEEccCCcccCCCCCC-CCCccCccccCCCCccccCCC
Q 038098 153 INLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNK-GPFRNFSTESFEGNELLCGMP 217 (580)
Q Consensus 153 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~~~~~~n~~~c~~p 217 (580)
++|+.|+|++|++++..+..|..+++|+.|++++|+++..++.. ..++++..+++.+|+|.|++.
T Consensus 231 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 231 MHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp TTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred ccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCC
Confidence 99999999999999888999999999999999999999888765 668899999999999999854
No 256
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.2e-28 Score=242.14 Aligned_cols=212 Identities=24% Similarity=0.279 Sum_probs=177.6
Q ss_pred ccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCC-CCCC-C
Q 038098 3 NLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNK-LTSI-P 80 (580)
Q Consensus 3 ~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~-l~~l-p 80 (580)
.++ .+|..+ .++|++|+|++|.|+...++.|..+++|++|+|++|.++++.+..|.++++|++|+|++|+ ++.+ |
T Consensus 22 ~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~ 98 (285)
T 1ozn_A 22 GLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDP 98 (285)
T ss_dssp CCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCT
T ss_pred Ccc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCH
Confidence 344 455444 4689999999999987777888889999999999999988888889999999999999997 8887 5
Q ss_pred CCCcCCCCCceEeCcCCcc------cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccc
Q 038098 81 STLWNLKDILYLDLSSNFL------LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLIN 154 (580)
Q Consensus 81 ~~~~~l~~L~~L~l~~n~l------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 154 (580)
..+..+++|++|+|++|.+ .+.++++|+.|++++|.+++..+..|..+++|+.|+|++|.+++..+..|..+++
T Consensus 99 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 178 (285)
T 1ozn_A 99 ATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHS 178 (285)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred HHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccc
Confidence 6777889999999999987 2667888999999999998887778888899999999999998666667888899
Q ss_pred cccccccccccCCCccccccccCcccEEEccCCcccCCCCC-CCCCccCccccCCCCccccCCC
Q 038098 155 LKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPN-KGPFRNFSTESFEGNELLCGMP 217 (580)
Q Consensus 155 L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~~~~l~~~~~~~n~~~c~~p 217 (580)
|+.|+|++|.+++..|..+..+++|+.|++++|++++.++. ...++.+..+++.+|++.|+.+
T Consensus 179 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 179 LDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred cCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 99999999999887788888899999999999999887754 4667888888899999988765
No 257
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.2e-27 Score=235.02 Aligned_cols=217 Identities=27% Similarity=0.300 Sum_probs=195.2
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCc-CCcCCCccccCCCCCcEEEcCCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNK-LDGFVPACFGNLTNLRNLYLGSNKLTSI 79 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~l~~N~l~~l 79 (580)
+|+|+++.+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|. ++.+.+..|..+++|++|+|++|+++.+
T Consensus 41 ~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 120 (285)
T 1ozn_A 41 GNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQEL 120 (285)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCC
T ss_pred CCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEE
Confidence 588898888899999999999999999998889999999999999999997 8888899999999999999999999998
Q ss_pred C-CCCcCCCCCceEeCcCCcc------cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccc
Q 038098 80 P-STLWNLKDILYLDLSSNFL------LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDL 152 (580)
Q Consensus 80 p-~~~~~l~~L~~L~l~~n~l------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 152 (580)
+ ..+..+++|++|+|++|++ .+..+++|+.|++++|.++++++..|..+++|+.|+|++|.+++..|..|..+
T Consensus 121 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 200 (285)
T 1ozn_A 121 GPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDL 200 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred CHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCc
Confidence 4 5678899999999999998 26789999999999999998888889999999999999999998889999999
Q ss_pred cccccccccccccCCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCCCccccCCC
Q 038098 153 INLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNELLCGMP 217 (580)
Q Consensus 153 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~c~~p 217 (580)
++|+.|+|++|++++..+..+..+++|+.|++++|++++.++....+.++.......+...|..|
T Consensus 201 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p 265 (285)
T 1ozn_A 201 GRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLP 265 (285)
T ss_dssp TTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEES
T ss_pred ccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCc
Confidence 99999999999999877788999999999999999999988765444555555566667777655
No 258
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.95 E-value=1.8e-28 Score=243.93 Aligned_cols=215 Identities=23% Similarity=0.396 Sum_probs=196.8
Q ss_pred CCcccc--CCCcccCCCCCCCEEeccC-CcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCC
Q 038098 1 GNNLNG--SIPIAVGKLQKLQLLSLED-NQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLT 77 (580)
Q Consensus 1 ~N~~~~--~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 77 (580)
+|++++ .+|.+|.++++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++..|..|.++++|++|+|++|+|+
T Consensus 59 ~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 138 (313)
T 1ogq_A 59 GLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALS 138 (313)
T ss_dssp CCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEE
T ss_pred CCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccC
Confidence 578888 8999999999999999995 9999899999999999999999999999999999999999999999999999
Q ss_pred -CCCCCCcCCCCCceEeCcCCccc------ccCCC-cccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCccc
Q 038098 78 -SIPSTLWNLKDILYLDLSSNFLL------IGNLK-VLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSI 149 (580)
Q Consensus 78 -~lp~~~~~l~~L~~L~l~~n~l~------~~~l~-~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~ 149 (580)
.+|..+..+++|++|+|++|++. +..++ +|+.|++++|.+++..|..+..++ |+.|+|++|.+++.+|..|
T Consensus 139 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~ 217 (313)
T 1ogq_A 139 GTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLF 217 (313)
T ss_dssp SCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGC
T ss_pred CcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHH
Confidence 58888999999999999999983 66777 999999999999988999999887 9999999999999999999
Q ss_pred ccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCC-CCCCccCccccCCCCccccCCC
Q 038098 150 GDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPN-KGPFRNFSTESFEGNELLCGMP 217 (580)
Q Consensus 150 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~~~~l~~~~~~~n~~~c~~p 217 (580)
..+++|+.|+|++|++++.+|. +..+++|+.|++++|++++.+|. ...++.++.+++++|......|
T Consensus 218 ~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 218 GSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp CTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred hcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCC
Confidence 9999999999999999976665 88899999999999999977665 4678889999999998765444
No 259
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=1.4e-29 Score=267.21 Aligned_cols=194 Identities=23% Similarity=0.207 Sum_probs=100.6
Q ss_pred CCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCC--------------
Q 038098 17 KLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPST-------------- 82 (580)
Q Consensus 17 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~-------------- 82 (580)
+|++|+|++|.|++..|+.|..+++|++|+|++|.|++..| |..+++|++|+|++|+|+.+|..
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~ 112 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNIS 112 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCC
Confidence 55555555555555455555555555555555555554333 55555555555555555544321
Q ss_pred ---CcCCCCCceEeCcCCcc------cccCCCcccEEeCCCCcCCCCCCcccC-CccccceeccccccccccCCcccccc
Q 038098 83 ---LWNLKDILYLDLSSNFL------LIGNLKVLVQVDLSMNNFSDVIPTTIG-GLKDLQYLFLEYNRLQGSIPDSIGDL 152 (580)
Q Consensus 83 ---~~~l~~L~~L~l~~n~l------~~~~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~p~~~~~l 152 (580)
...+++|+.|+|++|.+ .+.++++|+.|+|++|.+++..|..+. .+++|+.|+|++|.|++. |. +..+
T Consensus 113 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l 190 (487)
T 3oja_A 113 RVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVF 190 (487)
T ss_dssp CEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCC
T ss_pred CCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccC
Confidence 01234455555555554 134455555555555555554444443 455555555555555533 21 2235
Q ss_pred cccccccccccccCCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCCCccccC
Q 038098 153 INLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNELLCG 215 (580)
Q Consensus 153 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~c~ 215 (580)
++|+.|+|++|.+++. |..+..+++|+.|++++|.+++.++....++.+..+++.+|++.|+
T Consensus 191 ~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 191 AKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp TTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHH
T ss_pred CCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCc
Confidence 5555556666655532 2335555566666666666655544444555555555666655553
No 260
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.94 E-value=5.2e-27 Score=261.99 Aligned_cols=217 Identities=35% Similarity=0.528 Sum_probs=173.5
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCC-CC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLT-SI 79 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~l 79 (580)
+|++++.+|..|..+++|+.|+|++|.+++.+|..+..+++|++|+|++|++++..|..|.++++|++|+|++|+++ .+
T Consensus 427 ~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 506 (768)
T 3rgz_A 427 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEI 506 (768)
T ss_dssp SSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCC
T ss_pred CCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcC
Confidence 46777777777777788888888888877777778888888888888888888777888888888888888888887 46
Q ss_pred CCCCcCCCCCceEeCcCCcc------cccCCCcccEEeCCCCcCCCCCCcc-----------------------------
Q 038098 80 PSTLWNLKDILYLDLSSNFL------LIGNLKVLVQVDLSMNNFSDVIPTT----------------------------- 124 (580)
Q Consensus 80 p~~~~~l~~L~~L~l~~n~l------~~~~l~~L~~L~l~~N~l~~~~~~~----------------------------- 124 (580)
|..+..+++|++|+|++|++ .+.++++|+.|++++|.+++.+|..
T Consensus 507 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (768)
T 3rgz_A 507 PKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKE 586 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTT
T ss_pred ChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccc
Confidence 77777888888888888887 3667888888888888887555432
Q ss_pred -----------------------------------------cCCccccceeccccccccccCCccccccccccccccccc
Q 038098 125 -----------------------------------------IGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNN 163 (580)
Q Consensus 125 -----------------------------------------~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N 163 (580)
+..++.|+.|+|++|+++|.+|..++.+++|+.|+|++|
T Consensus 587 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N 666 (768)
T 3rgz_A 587 CHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHN 666 (768)
T ss_dssp CCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSS
T ss_pred ccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCC
Confidence 334567888888888888888888888899999999999
Q ss_pred ccCCCccccccccCcccEEEccCCcccCCCCCC-CCCccCccccCCCCccccCCC
Q 038098 164 NLSGTIPISLEKLLDLKDINVSFNKLEGEIPNK-GPFRNFSTESFEGNELLCGMP 217 (580)
Q Consensus 164 ~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~~~~~~n~~~c~~p 217 (580)
++++.+|..+..+++|+.||+++|++++.+|.. ..+..++.+++++|+....-|
T Consensus 667 ~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP 721 (768)
T 3rgz_A 667 DISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721 (768)
T ss_dssp CCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECC
T ss_pred ccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCC
Confidence 999888988999999999999999998877754 667778888888888755444
No 261
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.94 E-value=4.3e-27 Score=233.61 Aligned_cols=216 Identities=23% Similarity=0.322 Sum_probs=179.6
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCC--CchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGS--IPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTS 78 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 78 (580)
+|+|+++.+..|.++++|++|+|++|.++.. .|..+..+++|++|+|++|.++. +|..|..+++|++|+|++|+++.
T Consensus 37 ~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~ 115 (306)
T 2z66_A 37 SNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQ 115 (306)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEES
T ss_pred CCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccc
Confidence 4677765556688889999999999988733 36777788899999999998884 56678889999999999999988
Q ss_pred CCC--CCcCCCCCceEeCcCCcc------cccCCCcccEEeCCCCcCCC-CCCcccCCccccceeccccccccccCCccc
Q 038098 79 IPS--TLWNLKDILYLDLSSNFL------LIGNLKVLVQVDLSMNNFSD-VIPTTIGGLKDLQYLFLEYNRLQGSIPDSI 149 (580)
Q Consensus 79 lp~--~~~~l~~L~~L~l~~n~l------~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~ 149 (580)
++. .+..+++|++|++++|.+ .+..+++|+.|++++|.+++ ..|..+..+++|+.|+|++|.+++..|..|
T Consensus 116 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 195 (306)
T 2z66_A 116 MSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAF 195 (306)
T ss_dssp STTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT
T ss_pred cccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHh
Confidence 764 677889999999999987 26678899999999999986 567888899999999999999997778888
Q ss_pred ccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCC-CCC-ccCccccCCCCccccCCC
Q 038098 150 GDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNK-GPF-RNFSTESFEGNELLCGMP 217 (580)
Q Consensus 150 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~-~~l~~~~~~~n~~~c~~p 217 (580)
..+++|+.|+|++|++++..+..+..+++|+.|++++|++++..+.. ..+ +.+..+++.+|++.|+++
T Consensus 196 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 196 NSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp TTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred cCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 89999999999999999777778888999999999999998877654 445 478888999999988743
No 262
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.94 E-value=1.2e-26 Score=227.90 Aligned_cols=202 Identities=27% Similarity=0.265 Sum_probs=182.4
Q ss_pred ccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCCcCCCCCc
Q 038098 11 AVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTLWNLKDIL 90 (580)
Q Consensus 11 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~~~l~~L~ 90 (580)
.+.++++++.+++++|.++ .+|..+. ++|++|+|++|.|+++.+..|.++++|++|+|++|+|+.++.. ..+++|+
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~~L~ 80 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLG 80 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-SCCTTCC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-CCCCcCC
Confidence 4778999999999999998 5665554 6899999999999988889999999999999999999998765 7899999
Q ss_pred eEeCcCCcc-----cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCccccccccccccccccccc
Q 038098 91 YLDLSSNFL-----LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNL 165 (580)
Q Consensus 91 ~L~l~~n~l-----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l 165 (580)
+|+|++|++ .+..+++|+.|++++|+++++++..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++
T Consensus 81 ~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 81 TLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp EEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred EEECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 999999998 367889999999999999998889999999999999999999977777788999999999999999
Q ss_pred CCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCCCccccCC
Q 038098 166 SGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNELLCGM 216 (580)
Q Consensus 166 ~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~c~~ 216 (580)
+...+..+..+++|+.|++++|+++..++.......+..+++.+|+|.|++
T Consensus 161 ~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 161 TELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcC
Confidence 977777788999999999999999988887777788899999999999974
No 263
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.94 E-value=1.1e-26 Score=244.05 Aligned_cols=217 Identities=26% Similarity=0.271 Sum_probs=148.8
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchh--hhCCCCCceeeCCCCcCCcCCCcc-ccCCCCCcEEEcCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDD--LCRLAALFELDSGGNKLDGFVPAC-FGNLTNLRNLYLGSNKLT 77 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~l~~N~l~ 77 (580)
+|++++..|.+|.++++|++|+|++|.+++..|.. |..+++|++|+|++|.+++..|.. |.++++|++|+|++|+++
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~ 167 (455)
T 3v47_A 88 YNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK 167 (455)
T ss_dssp TCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBS
T ss_pred CCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccc
Confidence 45666666667777777777777777776544443 667777777777777777665654 677777777777777776
Q ss_pred CCCC-CCcC----------------------------------CCCCceEeCcCCcc-----------------------
Q 038098 78 SIPS-TLWN----------------------------------LKDILYLDLSSNFL----------------------- 99 (580)
Q Consensus 78 ~lp~-~~~~----------------------------------l~~L~~L~l~~n~l----------------------- 99 (580)
.++. .+.. +++|++|++++|++
T Consensus 168 ~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~ 247 (455)
T 3v47_A 168 SICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILS 247 (455)
T ss_dssp CCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECT
T ss_pred ccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeec
Confidence 5432 2221 23455555555432
Q ss_pred ----------------------------------------------cccCCCcccEEeCCCCcCCCCCCcccCCccccce
Q 038098 100 ----------------------------------------------LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQY 133 (580)
Q Consensus 100 ----------------------------------------------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 133 (580)
.+..+++|+.|++++|.+++..+..|..+++|+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 327 (455)
T 3v47_A 248 NSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLK 327 (455)
T ss_dssp TCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCE
Confidence 1345667777777777777776777777777777
Q ss_pred eccccccccccCCcccccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCC-CCCccCccccCCCCcc
Q 038098 134 LFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNK-GPFRNFSTESFEGNEL 212 (580)
Q Consensus 134 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~~~~~~n~~ 212 (580)
|+|++|.+++..|..|..+++|+.|+|++|++++..|..+..+++|+.|++++|++++.++.. ..++.++.+++.+|++
T Consensus 328 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 407 (455)
T 3v47_A 328 LNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPW 407 (455)
T ss_dssp EECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred EECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCc
Confidence 777777777666777777777888888888877666777777888888888888887766644 5667777788888888
Q ss_pred ccCCC
Q 038098 213 LCGMP 217 (580)
Q Consensus 213 ~c~~p 217 (580)
.|+.|
T Consensus 408 ~~~~~ 412 (455)
T 3v47_A 408 DCSCP 412 (455)
T ss_dssp CCCTT
T ss_pred ccCCC
Confidence 77765
No 264
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.94 E-value=1e-27 Score=243.10 Aligned_cols=217 Identities=17% Similarity=0.209 Sum_probs=184.4
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP 80 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp 80 (580)
+|+|+++.+.+|.++++|++|+|++|.+++..|+.|.++++|++|+|++|+|+++.+..|.++++|++|+|++|+++.+|
T Consensus 61 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~ 140 (353)
T 2z80_A 61 NNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLG 140 (353)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSC
T ss_pred CCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccC
Confidence 57788777778999999999999999999888888999999999999999999766666999999999999999999988
Q ss_pred C--CCcCCCCCceEeCcCCc-c------cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCccccc
Q 038098 81 S--TLWNLKDILYLDLSSNF-L------LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGD 151 (580)
Q Consensus 81 ~--~~~~l~~L~~L~l~~n~-l------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 151 (580)
. .+..+++|++|++++|. + .+.++++|+.|++++|.+++..|..|..+++|+.|++++|.++...+..+..
T Consensus 141 ~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~ 220 (353)
T 2z80_A 141 ETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDV 220 (353)
T ss_dssp SSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHH
T ss_pred chhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhh
Confidence 7 67789999999999984 4 3678889999999999999888889999999999999999987433334456
Q ss_pred ccccccccccccccCCCc-------------------------------cccccccCcccEEEccCCcccCCCCCC-CCC
Q 038098 152 LINLKSLNLSNNNLSGTI-------------------------------PISLEKLLDLKDINVSFNKLEGEIPNK-GPF 199 (580)
Q Consensus 152 l~~L~~L~l~~N~l~~~~-------------------------------~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~ 199 (580)
+++|+.|++++|.+++.. |..+..+++|+.|++++|+++..++.. ..+
T Consensus 221 ~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l 300 (353)
T 2z80_A 221 TSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRL 300 (353)
T ss_dssp TTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred cccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcC
Confidence 889999999999998643 345667889999999999999777664 678
Q ss_pred ccCccccCCCCccccCCC
Q 038098 200 RNFSTESFEGNELLCGMP 217 (580)
Q Consensus 200 ~~l~~~~~~~n~~~c~~p 217 (580)
+++..+++.+|++.|+.|
T Consensus 301 ~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 301 TSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp TTCCEEECCSSCBCCCHH
T ss_pred CCCCEEEeeCCCccCcCC
Confidence 899999999999988754
No 265
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=3.5e-26 Score=223.43 Aligned_cols=208 Identities=22% Similarity=0.267 Sum_probs=184.0
Q ss_pred CCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCC-CCCcC
Q 038098 7 SIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP-STLWN 85 (580)
Q Consensus 7 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp-~~~~~ 85 (580)
.+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|.++++.+..|.++++|++|+|++|+|+.++ ..+.+
T Consensus 21 ~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (276)
T 2z62_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (276)
T ss_dssp SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcC
Confidence 4666554 58999999999999878889999999999999999999888889999999999999999999977 56889
Q ss_pred CCCCceEeCcCCcc------cccCCCcccEEeCCCCcCCCC-CCcccCCccccceeccccccccccCCcccccccccc--
Q 038098 86 LKDILYLDLSSNFL------LIGNLKVLVQVDLSMNNFSDV-IPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLK-- 156 (580)
Q Consensus 86 l~~L~~L~l~~n~l------~~~~l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~-- 156 (580)
+++|++|++++|.+ .+..+++|+.|++++|.+++. .|..|..+++|+.|+|++|++++..+..+..+.+|+
T Consensus 99 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l 178 (276)
T 2z62_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 178 (276)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTC
T ss_pred CccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcccc
Confidence 99999999999998 377889999999999999875 488999999999999999999987778888888888
Q ss_pred --cccccccccCCCccccccccCcccEEEccCCcccCCCCCC-CCCccCccccCCCCccccCCC
Q 038098 157 --SLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNK-GPFRNFSTESFEGNELLCGMP 217 (580)
Q Consensus 157 --~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~~~~~~n~~~c~~p 217 (580)
.|++++|.+++..+..+. ..+|+.|++++|.+++.++.. ..++++..+++.+|++.|+++
T Consensus 179 ~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 179 NLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred ceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 899999999965555554 458999999999999888765 668899999999999999866
No 266
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.94 E-value=2.5e-26 Score=236.19 Aligned_cols=208 Identities=23% Similarity=0.229 Sum_probs=125.9
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP 80 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp 80 (580)
+|+|+++.|.+|..+++|++|+|++|.+++..|..|.++++|++|+|++|.++.+.+..|.++++|++|+|++|+++.++
T Consensus 78 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~ 157 (390)
T 3o6n_A 78 DLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIE 157 (390)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCC
T ss_pred CCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccC
Confidence 46677666677777777777777777777666777777777777777777777665556777777777777777777764
Q ss_pred C-CCcCCCCCceEeCcCCccc---ccCC----------------------------------------CcccEEeCCCCc
Q 038098 81 S-TLWNLKDILYLDLSSNFLL---IGNL----------------------------------------KVLVQVDLSMNN 116 (580)
Q Consensus 81 ~-~~~~l~~L~~L~l~~n~l~---~~~l----------------------------------------~~L~~L~l~~N~ 116 (580)
. .+..+++|++|++++|++. +..+ ++|+.|++++|.
T Consensus 158 ~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~ 237 (390)
T 3o6n_A 158 DDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNN 237 (390)
T ss_dssp TTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSC
T ss_pred hhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccCCCCcceEEECCCCeeeeccccccccccEEECCCCC
Confidence 3 4666777777777777652 1111 123333333333
Q ss_pred CCCCCCcccCCccccceeccccccccccCCcccccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCC
Q 038098 117 FSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNK 196 (580)
Q Consensus 117 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 196 (580)
+++. ..+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|+++ .+|..+..+++|+.|++++|+++..++..
T Consensus 238 l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 314 (390)
T 3o6n_A 238 LTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLLHVERNQ 314 (390)
T ss_dssp CCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCC-EEECSSSCCTTCCEEECCSSCCCCCGGGH
T ss_pred Cccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCc-ccCcccCCCCCCCEEECCCCcceecCccc
Confidence 3322 23445555666666666665555555555556666666666555 33444445555555555555555444443
Q ss_pred CCCccCccccCCCCc
Q 038098 197 GPFRNFSTESFEGNE 211 (580)
Q Consensus 197 ~~~~~l~~~~~~~n~ 211 (580)
..++.++.+++.+|+
T Consensus 315 ~~l~~L~~L~L~~N~ 329 (390)
T 3o6n_A 315 PQFDRLENLYLDHNS 329 (390)
T ss_dssp HHHTTCSEEECCSSC
T ss_pred cccCcCCEEECCCCc
Confidence 344444445554444
No 267
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1.7e-25 Score=217.79 Aligned_cols=198 Identities=28% Similarity=0.398 Sum_probs=148.9
Q ss_pred CCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCC-cCCCCCceEeCc
Q 038098 17 KLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTL-WNLKDILYLDLS 95 (580)
Q Consensus 17 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~-~~l~~L~~L~l~ 95 (580)
+++.+++++|.++ .+|..+. ++|++|+|++|+|+++.+..|.++++|++|+|++|+|+.+|... ..+++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 4677888888877 4555444 56788888888887776667888888888888888888777654 567788888888
Q ss_pred CCcc------cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccccccccccccCCCc
Q 038098 96 SNFL------LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTI 169 (580)
Q Consensus 96 ~n~l------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 169 (580)
+|++ .+..+++|+.|++++|.++++.+..|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 8877 2566778888888888888777777788888888888888887555556777888888888888888766
Q ss_pred cccccccCcccEEEccCCcccCCCCC-CCCCccCccccCCCCccccCCC
Q 038098 170 PISLEKLLDLKDINVSFNKLEGEIPN-KGPFRNFSTESFEGNELLCGMP 217 (580)
Q Consensus 170 ~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~~~~l~~~~~~~n~~~c~~p 217 (580)
+..+..+++|+.|++++|+++..++. ...++.+..+++.+|+|.|+++
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 66777788888888888888876664 3456777777888888877654
No 268
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=4.3e-26 Score=247.38 Aligned_cols=99 Identities=23% Similarity=0.196 Sum_probs=75.5
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP 80 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp 80 (580)
+|+|+++.|.+|..+++|++|+|++|.|++..|..|+++++|++|+|++|.|+++.+..|+++++|++|+|++|+|+.++
T Consensus 84 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~ 163 (597)
T 3oja_B 84 DLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIE 163 (597)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCC
T ss_pred CCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCC
Confidence 46777777777888888888888888887777777778888888888888887666666777888888888888877765
Q ss_pred C-CCcCCCCCceEeCcCCcc
Q 038098 81 S-TLWNLKDILYLDLSSNFL 99 (580)
Q Consensus 81 ~-~~~~l~~L~~L~l~~n~l 99 (580)
. .+..+++|++|+|++|.+
T Consensus 164 ~~~~~~l~~L~~L~L~~N~l 183 (597)
T 3oja_B 164 DDTFQATTSLQNLQLSSNRL 183 (597)
T ss_dssp TTTTTTCTTCCEEECTTSCC
T ss_pred hhhhhcCCcCcEEECcCCCC
Confidence 4 566777777777777765
No 269
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.93 E-value=2e-26 Score=230.69 Aligned_cols=204 Identities=23% Similarity=0.276 Sum_probs=139.1
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCC-CCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNK-LTSI 79 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~-l~~l 79 (580)
+|+|+ .+|..+.++++|++|+|++|.++ .+|..|+.+++|++|+|++|.++ .+|..|.++++|++|+|++|+ +..+
T Consensus 90 ~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~ 166 (328)
T 4fcg_A 90 SVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTEL 166 (328)
T ss_dssp SSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCC
T ss_pred CCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCcccc
Confidence 35555 56666777777777777777777 66777777777777777777777 556677777777777777754 3446
Q ss_pred CCCCcC---------CCCCceEeCcCCcc-----cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccC
Q 038098 80 PSTLWN---------LKDILYLDLSSNFL-----LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSI 145 (580)
Q Consensus 80 p~~~~~---------l~~L~~L~l~~n~l-----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 145 (580)
|..+.. +++|++|+|++|++ .+..+++|+.|+|++|.++++ |..+..+++|+.|+|++|.+.+.+
T Consensus 167 p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~l-~~~l~~l~~L~~L~Ls~n~~~~~~ 245 (328)
T 4fcg_A 167 PEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSAL-GPAIHHLPKLEELDLRGCTALRNY 245 (328)
T ss_dssp CSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCCC-CGGGGGCTTCCEEECTTCTTCCBC
T ss_pred ChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCcC-chhhccCCCCCEEECcCCcchhhh
Confidence 655543 67777777777776 255667777777777777754 445677777777777777777677
Q ss_pred CcccccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCC-CCCccCccccCC
Q 038098 146 PDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNK-GPFRNFSTESFE 208 (580)
Q Consensus 146 p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~~~~~ 208 (580)
|..+..+++|+.|+|++|.+.+.+|..+..+++|+.|++++|++.+.+|.. ..++.+..+.+.
T Consensus 246 p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~ 309 (328)
T 4fcg_A 246 PPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVP 309 (328)
T ss_dssp CCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECC
T ss_pred HHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCC
Confidence 777777777777777777777777777777777777777777776666543 444444444443
No 270
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.93 E-value=2.8e-26 Score=242.37 Aligned_cols=216 Identities=23% Similarity=0.278 Sum_probs=123.4
Q ss_pred CccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCC-
Q 038098 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP- 80 (580)
Q Consensus 2 N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp- 80 (580)
|+|+++.|.+|.++++|++|+|++|.|++..|+.|.++++|++|+|++|.++.+.+..|.++++|++|+|++|+++.++
T Consensus 42 n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~ 121 (477)
T 2id5_A 42 NRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLD 121 (477)
T ss_dssp SCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECT
T ss_pred CccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCCh
Confidence 4555555555555555555555555555444555555555555555555555444444555555555555555544432
Q ss_pred C------------------------CCcCCCCCceEeCcCCccc------ccCCCcccEE--------------------
Q 038098 81 S------------------------TLWNLKDILYLDLSSNFLL------IGNLKVLVQV-------------------- 110 (580)
Q Consensus 81 ~------------------------~~~~l~~L~~L~l~~n~l~------~~~l~~L~~L-------------------- 110 (580)
. .+.++++|++|+|++|++. +.++++|+.|
T Consensus 122 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~ 201 (477)
T 2id5_A 122 YMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR 201 (477)
T ss_dssp TTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTT
T ss_pred hHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcc
Confidence 2 3334444444444444431 2222233333
Q ss_pred ----------------------------eCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccccccccc
Q 038098 111 ----------------------------DLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSN 162 (580)
Q Consensus 111 ----------------------------~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~ 162 (580)
++++|.++.+++..|..+++|+.|+|++|.+++..+..|..+++|+.|+|++
T Consensus 202 L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 281 (477)
T 2id5_A 202 LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVG 281 (477)
T ss_dssp CCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCS
T ss_pred cceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCC
Confidence 3333333333333455566666666666666655556667777777777777
Q ss_pred cccCCCccccccccCcccEEEccCCcccCCCCCC-CCCccCccccCCCCccccCCC
Q 038098 163 NNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNK-GPFRNFSTESFEGNELLCGMP 217 (580)
Q Consensus 163 N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~~~~~~n~~~c~~p 217 (580)
|++++..|..+..+++|+.|++++|.+++.++.. ..++++..+++.+|++.|+++
T Consensus 282 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 282 GQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCR 337 (477)
T ss_dssp SCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGG
T ss_pred CccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccc
Confidence 7777666777777778888888888887766543 556777778888888887643
No 271
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=5.7e-27 Score=249.35 Aligned_cols=186 Identities=18% Similarity=0.165 Sum_probs=145.4
Q ss_pred CcCceeccccCceEEEEEeCCCCEEEEEEEecccc--------chhhhHHHHHHHHhhcCCCCcceEEeeeecCCceeeE
Q 038098 295 SENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYG--------RAFKSFDIECDMIKRIRHRNIIKIISSCSSDDFKALV 366 (580)
Q Consensus 295 ~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 366 (580)
...+.||+|+||.||+|... ++.+++|....... ...+.+.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 44678999999999999554 78899998743221 1134578999999999999999666666677778999
Q ss_pred eeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCC
Q 038098 367 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKED 446 (580)
Q Consensus 367 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 446 (580)
|||+++++|.+++.. +..++.|+++||+||| +.+|+||||||+|||++. .+||+|||+++......
T Consensus 418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 999999999999875 5689999999999999 999999999999999999 99999999999764322
Q ss_pred Ccc-----cccccccCCCcCCcccccC--CCCCCchhhHhHHHHHHHHHhCCCCCC
Q 038098 447 QSL-----TQTQTLATIGYMAPEYGRE--GQVSTNGDVYSFGIMLMETFTRKKPTD 495 (580)
Q Consensus 447 ~~~-----~~~~~~~~~~y~aPE~~~~--~~~~~~~Dvws~Gvil~elltg~~p~~ 495 (580)
... ......||+.|+|||++.. ..|+..+|+||.++-..+-+.++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 111 1235579999999999876 567788899999999999888887763
No 272
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=2.8e-25 Score=216.23 Aligned_cols=193 Identities=26% Similarity=0.330 Sum_probs=174.3
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP 80 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp 80 (580)
+|+++ .+|..+. ++|++|+|++|+|+...+..|.++++|++|+|++|.|+.+.+..|.++++|++|+|++|+|+.+|
T Consensus 25 ~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~ 101 (270)
T 2o6q_A 25 SKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALP 101 (270)
T ss_dssp TSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCC
T ss_pred CCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCC
Confidence 35566 4676554 68999999999999877789999999999999999999888888999999999999999999988
Q ss_pred C-CCcCCCCCceEeCcCCcc------cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCccccccc
Q 038098 81 S-TLWNLKDILYLDLSSNFL------LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLI 153 (580)
Q Consensus 81 ~-~~~~l~~L~~L~l~~n~l------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 153 (580)
. .+..+++|++|+|++|++ .+..+++|+.|+|++|.++++++..|..+++|+.|+|++|.+++..+..|..++
T Consensus 102 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 181 (270)
T 2o6q_A 102 IGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLT 181 (270)
T ss_dssp TTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCT
T ss_pred HhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCC
Confidence 6 457899999999999998 367899999999999999998888899999999999999999977777899999
Q ss_pred ccccccccccccCCCccccccccCcccEEEccCCcccCCCCCC
Q 038098 154 NLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNK 196 (580)
Q Consensus 154 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 196 (580)
+|+.|+|++|++++..+..+..+++|+.|++++|++.+.+...
T Consensus 182 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 224 (270)
T 2o6q_A 182 ELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNGI 224 (270)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSSSS
T ss_pred CcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCccH
Confidence 9999999999999877778999999999999999999988644
No 273
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.93 E-value=8.7e-26 Score=235.88 Aligned_cols=195 Identities=27% Similarity=0.305 Sum_probs=181.8
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCC-CCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGS-NKLTSI 79 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~-N~l~~l 79 (580)
+|+|+++.+.+|.++++|++|+|++|+|+...++.|..+++|++|+|++|.|+.+.+..|.++++|++|+|++ |.++.+
T Consensus 97 ~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i 176 (440)
T 3zyj_A 97 RNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYI 176 (440)
T ss_dssp SSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEE
T ss_pred CCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCccee
Confidence 5889988889999999999999999999977778899999999999999999988888999999999999998 567777
Q ss_pred CC-CCcCCCCCceEeCcCCcc----cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccc
Q 038098 80 PS-TLWNLKDILYLDLSSNFL----LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLIN 154 (580)
Q Consensus 80 p~-~~~~l~~L~~L~l~~n~l----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 154 (580)
+. .+.++++|++|+|++|++ .+..+++|+.|+|++|.++++.+..|.++++|+.|+|++|.|++..+..|..+++
T Consensus 177 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 256 (440)
T 3zyj_A 177 SEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQS 256 (440)
T ss_dssp CTTTTTTCSSCCEEECTTSCCSSCCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTT
T ss_pred CcchhhcccccCeecCCCCcCccccccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCC
Confidence 76 677899999999999999 3678899999999999999999999999999999999999999888999999999
Q ss_pred cccccccccccCCCccccccccCcccEEEccCCcccCCCCC
Q 038098 155 LKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPN 195 (580)
Q Consensus 155 L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 195 (580)
|+.|+|++|++++..+..+..+++|+.|++++|++.|.+..
T Consensus 257 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 257 LVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDI 297 (440)
T ss_dssp CCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTT
T ss_pred CCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCc
Confidence 99999999999988888899999999999999999998753
No 274
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=6.7e-26 Score=221.42 Aligned_cols=196 Identities=23% Similarity=0.276 Sum_probs=177.1
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP 80 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp 80 (580)
+|+|+++.+.+|.++++|++|+|++|.++...++.|..+++|++|+|++|.+++..+..|.++++|++|++++|+++.++
T Consensus 37 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 116 (276)
T 2z62_A 37 FNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE 116 (276)
T ss_dssp TCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCST
T ss_pred CCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccC
Confidence 58888888889999999999999999999888889999999999999999999988899999999999999999999987
Q ss_pred C-CCcCCCCCceEeCcCCcc-------cccCCCcccEEeCCCCcCCCCCCcccCCccccc----eeccccccccccCCcc
Q 038098 81 S-TLWNLKDILYLDLSSNFL-------LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQ----YLFLEYNRLQGSIPDS 148 (580)
Q Consensus 81 ~-~~~~l~~L~~L~l~~n~l-------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~----~L~l~~n~l~~~~p~~ 148 (580)
. .+..+++|++|+|++|++ .+.++++|+.|++++|.++++.+..|..++.|+ .|++++|.+++..+..
T Consensus 117 ~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~ 196 (276)
T 2z62_A 117 NFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGA 196 (276)
T ss_dssp TCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTS
T ss_pred chhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccc
Confidence 6 688999999999999998 256789999999999999998888888888887 8999999999655554
Q ss_pred cccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCCC
Q 038098 149 IGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKG 197 (580)
Q Consensus 149 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~ 197 (580)
+. ..+|+.|+|++|++++..+..+..+++|+.|++++|+++|.++...
T Consensus 197 ~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l~ 244 (276)
T 2z62_A 197 FK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 244 (276)
T ss_dssp SC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTTH
T ss_pred cC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCchH
Confidence 54 4689999999999998777778999999999999999999987653
No 275
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.93 E-value=9e-26 Score=236.64 Aligned_cols=195 Identities=25% Similarity=0.270 Sum_probs=182.2
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCC-CCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGS-NKLTSI 79 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~-N~l~~l 79 (580)
+|+|+++.|.+|..+++|++|+|++|.|+...++.|..+++|++|+|++|.|+.+.+..|.++++|++|+|++ |.++.+
T Consensus 108 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i 187 (452)
T 3zyi_A 108 RNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYI 187 (452)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEE
T ss_pred CCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCcccc
Confidence 5889999999999999999999999999988888899999999999999999988888999999999999998 677778
Q ss_pred CC-CCcCCCCCceEeCcCCcc----cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccc
Q 038098 80 PS-TLWNLKDILYLDLSSNFL----LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLIN 154 (580)
Q Consensus 80 p~-~~~~l~~L~~L~l~~n~l----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 154 (580)
+. .+.++++|++|+|++|++ .+..+++|+.|+|++|.+++..+..|.++++|+.|+|++|.+++..|..|..+++
T Consensus 188 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 267 (452)
T 3zyi_A 188 SEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLAS 267 (452)
T ss_dssp CTTTTTTCTTCCEEECTTSCCSSCCCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred ChhhccCCCCCCEEECCCCcccccccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCC
Confidence 76 577899999999999999 3678899999999999999999999999999999999999999888999999999
Q ss_pred cccccccccccCCCccccccccCcccEEEccCCcccCCCCC
Q 038098 155 LKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPN 195 (580)
Q Consensus 155 L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 195 (580)
|+.|+|++|++++..+..+..+++|+.|++++|++.|.+..
T Consensus 268 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 268 LVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp CCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTT
T ss_pred CCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCc
Confidence 99999999999988888899999999999999999998763
No 276
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.93 E-value=6.9e-26 Score=255.53 Aligned_cols=212 Identities=25% Similarity=0.293 Sum_probs=133.5
Q ss_pred CccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCC
Q 038098 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPS 81 (580)
Q Consensus 2 N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~ 81 (580)
|++.+..|..|..+++|+.|+|++|.|++..|+.|..+++|++|+|++|.++++.|..|.++++|++|+|++|+|+.++.
T Consensus 276 n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~ 355 (844)
T 3j0a_A 276 GFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQD 355 (844)
T ss_dssp CCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCS
T ss_pred CcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccCh
Confidence 55555556666666666666666666665566666666666666666666666666666666666666666666666543
Q ss_pred -CCcCCCCCceEeCcCCccc----------------------------------------------ccCCCcccEEeCCC
Q 038098 82 -TLWNLKDILYLDLSSNFLL----------------------------------------------IGNLKVLVQVDLSM 114 (580)
Q Consensus 82 -~~~~l~~L~~L~l~~n~l~----------------------------------------------~~~l~~L~~L~l~~ 114 (580)
.+..+++|++|+|++|.+. +.++++|+.|+|++
T Consensus 356 ~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~ 435 (844)
T 3j0a_A 356 QTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQ 435 (844)
T ss_dssp SCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEES
T ss_pred hhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCC
Confidence 3445666666666655541 11445555566666
Q ss_pred CcCCCCC------------------------------CcccCCccccceeccccccccccCCcccccccccccccccccc
Q 038098 115 NNFSDVI------------------------------PTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNN 164 (580)
Q Consensus 115 N~l~~~~------------------------------~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~ 164 (580)
|++++.. +..|.++++|+.|+|++|.|++..|..|..+++|+.|+|++|+
T Consensus 436 N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 515 (844)
T 3j0a_A 436 NRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNR 515 (844)
T ss_dssp CCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCC
T ss_pred CcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCC
Confidence 5555322 2335556666666666666665556666666666666666666
Q ss_pred cCCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCCCccccCCC
Q 038098 165 LSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNELLCGMP 217 (580)
Q Consensus 165 l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~c~~p 217 (580)
+++..+..+. ++|+.|++++|++++.+|.. +..+..+++.+|++.|+++
T Consensus 516 l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 516 LTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICECE 564 (844)
T ss_dssp CSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSSS
T ss_pred CCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCcccccc
Confidence 6655555444 56666667777766666643 5677888899999999765
No 277
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.93 E-value=7.7e-26 Score=226.35 Aligned_cols=190 Identities=24% Similarity=0.264 Sum_probs=177.7
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccC---------CCCCcEEEc
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGN---------LTNLRNLYL 71 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~---------l~~L~~L~l 71 (580)
+|+|+ .+|.+|..+++|++|+|++|.++ .+|..|.++++|++|+|++|++.+.+|..+.. +++|++|+|
T Consensus 113 ~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L 190 (328)
T 4fcg_A 113 AAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRL 190 (328)
T ss_dssp SSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEE
T ss_pred CCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEEC
Confidence 57888 88999999999999999999999 78999999999999999999888888887654 999999999
Q ss_pred CCCCCCCCCCCCcCCCCCceEeCcCCcc-----cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCC
Q 038098 72 GSNKLTSIPSTLWNLKDILYLDLSSNFL-----LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIP 146 (580)
Q Consensus 72 ~~N~l~~lp~~~~~l~~L~~L~l~~n~l-----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p 146 (580)
++|+|+.+|..+..+++|++|+|++|++ .+..+++|+.|++++|.+.+..|..|..+++|+.|+|++|.+.+.+|
T Consensus 191 ~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p 270 (328)
T 4fcg_A 191 EWTGIRSLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLP 270 (328)
T ss_dssp EEECCCCCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCC
T ss_pred cCCCcCcchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcc
Confidence 9999999999999999999999999998 36789999999999999999999999999999999999999999999
Q ss_pred cccccccccccccccccccCCCccccccccCcccEEEccCCcccCC
Q 038098 147 DSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGE 192 (580)
Q Consensus 147 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~ 192 (580)
..+..+++|+.|+|++|++.+.+|..+..+++|+.+++..|.+...
T Consensus 271 ~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~l 316 (328)
T 4fcg_A 271 LDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQL 316 (328)
T ss_dssp TTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSCC-
T ss_pred hhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHHHH
Confidence 9999999999999999999999999999999999999998876543
No 278
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=4.3e-25 Score=216.78 Aligned_cols=188 Identities=26% Similarity=0.217 Sum_probs=169.9
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP 80 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp 80 (580)
+|+++ .+|..+. ++|++|+|++|.|++..+..|..+++|++|+|++|.|+++.+ ...+++|++|+|++|+|+.+|
T Consensus 19 ~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~Ls~N~l~~l~ 93 (290)
T 1p9a_G 19 KRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLGTLDLSHNQLQSLP 93 (290)
T ss_dssp TSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCCEEECCSSCCSSCC
T ss_pred CCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCCEEECCCCcCCcCc
Confidence 35666 5666554 799999999999998888999999999999999999997644 388999999999999999999
Q ss_pred CCCcCCCCCceEeCcCCcc------cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccc
Q 038098 81 STLWNLKDILYLDLSSNFL------LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLIN 154 (580)
Q Consensus 81 ~~~~~l~~L~~L~l~~n~l------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 154 (580)
..+..+++|++|+|++|+| .+.++++|+.|+|++|+++++++..|..+++|+.|+|++|+|++..+..|..+++
T Consensus 94 ~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~ 173 (290)
T 1p9a_G 94 LLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLEN 173 (290)
T ss_dssp CCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTT
T ss_pred hhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCC
Confidence 9999999999999999998 3778999999999999999998889999999999999999999666667888999
Q ss_pred cccccccccccCCCccccccccCcccEEEccCCcccCCCC
Q 038098 155 LKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIP 194 (580)
Q Consensus 155 L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 194 (580)
|+.|+|++|+++ .+|..+..+++|+.|++++|++.|.+.
T Consensus 174 L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 174 LDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp CCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred CCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcCc
Confidence 999999999999 778888888999999999999998763
No 279
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.93 E-value=5.7e-25 Score=220.86 Aligned_cols=206 Identities=19% Similarity=0.232 Sum_probs=120.9
Q ss_pred CccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCC
Q 038098 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPS 81 (580)
Q Consensus 2 N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~ 81 (580)
|+|+++.|.+|.++++|++|+|++|.|++..|..|.++++|++|+|++|.++.+ |..+. ++|++|++++|+++.+|.
T Consensus 64 n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l-~~~~~--~~L~~L~l~~n~i~~~~~ 140 (332)
T 2ft3_A 64 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEI-PPNLP--SSLVELRIHDNRIRKVPK 140 (332)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCSC-CSSCC--TTCCEEECCSSCCCCCCS
T ss_pred CcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCcc-Ccccc--ccCCEEECCCCccCccCH
Confidence 555555555566666666666666666555555566666666666666665532 22222 455555555555555554
Q ss_pred C-CcCCCCCceEeCcCCccc--------ccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccc
Q 038098 82 T-LWNLKDILYLDLSSNFLL--------IGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDL 152 (580)
Q Consensus 82 ~-~~~l~~L~~L~l~~n~l~--------~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 152 (580)
. +..+++|++|++++|.+. +..+ +|+.|++++|.+++++ ..+. ++|+.|+|++|.+++..+..|..+
T Consensus 141 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~-~~~~--~~L~~L~l~~n~i~~~~~~~l~~l 216 (332)
T 2ft3_A 141 GVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIP-KDLP--ETLNELHLDHNKIQAIELEDLLRY 216 (332)
T ss_dssp GGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCC-SSSC--SSCSCCBCCSSCCCCCCTTSSTTC
T ss_pred hHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccC-cccc--CCCCEEECCCCcCCccCHHHhcCC
Confidence 2 445566666666666551 2222 4444444444444322 1111 466666777777765555667777
Q ss_pred cccccccccccccCCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCCCcccc
Q 038098 153 INLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNELLC 214 (580)
Q Consensus 153 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~c 214 (580)
++|+.|+|++|++++..+..+..+++|+.|++++|+++..+.....++.+..+++.+|....
T Consensus 217 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~l~~ 278 (332)
T 2ft3_A 217 SKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHTNNITK 278 (332)
T ss_dssp TTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCTTGGGCTTCCEEECCSSCCCB
T ss_pred CCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecChhhhcCccCCEEECCCCCCCc
Confidence 77777777777777666666777777777777777777555555566666777777666543
No 280
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.93 E-value=7.1e-25 Score=220.01 Aligned_cols=207 Identities=21% Similarity=0.263 Sum_probs=113.9
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP 80 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp 80 (580)
+|+|+++.+.+|.++++|++|+|++|.+++..|+.|..+++|++|+|++|.++.+ |..+. ++|++|++++|+++.++
T Consensus 61 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~l-~~~~~--~~L~~L~l~~n~l~~~~ 137 (330)
T 1xku_A 61 NNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKEL-PEKMP--KTLQELRVHENEITKVR 137 (330)
T ss_dssp SSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBC-CSSCC--TTCCEEECCSSCCCBBC
T ss_pred CCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCcc-Chhhc--ccccEEECCCCcccccC
Confidence 3555555555566666666666666666655555666666666666666665532 22221 44555555555555443
Q ss_pred C-CCcCCCCCceEeCcCCcc--------cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCccccc
Q 038098 81 S-TLWNLKDILYLDLSSNFL--------LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGD 151 (580)
Q Consensus 81 ~-~~~~l~~L~~L~l~~n~l--------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 151 (580)
. .+.++++|++|++++|.+ .+.++++|+.|++++|.++.++. .+. ++|+.|+|++|.+++..|..|..
T Consensus 138 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~-~~~--~~L~~L~l~~n~l~~~~~~~~~~ 214 (330)
T 1xku_A 138 KSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQ-GLP--PSLTELHLDGNKITKVDAASLKG 214 (330)
T ss_dssp HHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCS-SCC--TTCSEEECTTSCCCEECTGGGTT
T ss_pred HhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCc-ccc--ccCCEEECCCCcCCccCHHHhcC
Confidence 2 234455555555555554 13345555555555555554322 211 45555666666665555556666
Q ss_pred ccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCCCccc
Q 038098 152 LINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNELL 213 (580)
Q Consensus 152 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~ 213 (580)
+++|+.|+|++|.+++..+..+..+++|+.|++++|+++..+.....++.+..+++.+|+..
T Consensus 215 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~i~ 276 (330)
T 1xku_A 215 LNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNIS 276 (330)
T ss_dssp CTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECCSSCCC
T ss_pred CCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCChhhccCCCcCEEECCCCcCC
Confidence 66666666666666655555566666666666666666655544555556666666666543
No 281
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.92 E-value=7e-25 Score=220.06 Aligned_cols=211 Identities=24% Similarity=0.309 Sum_probs=186.0
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCC--
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTS-- 78 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-- 78 (580)
+|+|+++.|.+|..+++|++|+|++|.++ .+|..+. ++|++|++++|.++++.+..|.++++|++|++++|+++.
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 161 (330)
T 1xku_A 85 NNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSG 161 (330)
T ss_dssp SSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGG
T ss_pred CCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccC
Confidence 58899999999999999999999999998 5665554 799999999999998888899999999999999999974
Q ss_pred -CCCCCcCCCCCceEeCcCCccc---ccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccc
Q 038098 79 -IPSTLWNLKDILYLDLSSNFLL---IGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLIN 154 (580)
Q Consensus 79 -lp~~~~~l~~L~~L~l~~n~l~---~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 154 (580)
.+..+.++++|++|++++|.+. ..-.++|+.|++++|.+++..+..|..+++|+.|+|++|.+++..+..+..+++
T Consensus 162 ~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 241 (330)
T 1xku_A 162 IENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPH 241 (330)
T ss_dssp BCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTT
T ss_pred cChhhccCCCCcCEEECCCCccccCCccccccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCC
Confidence 4567788999999999999983 222379999999999999998999999999999999999999877888999999
Q ss_pred cccccccccccCCCccccccccCcccEEEccCCcccCCCCCCC-------CCccCccccCCCCccccC
Q 038098 155 LKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKG-------PFRNFSTESFEGNELLCG 215 (580)
Q Consensus 155 L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~-------~~~~l~~~~~~~n~~~c~ 215 (580)
|+.|+|++|+++ .+|..+..+++|+.|++++|++++..+... ....+..+++.+|++.+.
T Consensus 242 L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~ 308 (330)
T 1xku_A 242 LRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYW 308 (330)
T ss_dssp CCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGG
T ss_pred CCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCccccc
Confidence 999999999999 788889999999999999999998776542 235566788889987653
No 282
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.92 E-value=3.3e-25 Score=244.83 Aligned_cols=217 Identities=26% Similarity=0.335 Sum_probs=193.0
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCc-hhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCC--
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIP-DDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLT-- 77 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-- 77 (580)
+|+++++.|.+|..+++|+.|+|++|.+.+.+| ..|..+++|++|+|++|++.+..+..|..+++|+.|++++|.++
T Consensus 390 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~ 469 (680)
T 1ziw_A 390 KNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNV 469 (680)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCT
T ss_pred CCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhcccccccc
Confidence 478888999999999999999999999986555 78999999999999999999899999999999999999999986
Q ss_pred -CCCCCCcCCCCCceEeCcCCcc------cccCCCcccEEeCCCCcCCCCCC--------cccCCccccceecccccccc
Q 038098 78 -SIPSTLWNLKDILYLDLSSNFL------LIGNLKVLVQVDLSMNNFSDVIP--------TTIGGLKDLQYLFLEYNRLQ 142 (580)
Q Consensus 78 -~lp~~~~~l~~L~~L~l~~n~l------~~~~l~~L~~L~l~~N~l~~~~~--------~~~~~l~~L~~L~l~~n~l~ 142 (580)
.+|..+.++++|++|+|++|++ .+.++++|+.|++++|.++++.+ ..|.++++|+.|+|++|.++
T Consensus 470 ~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 549 (680)
T 1ziw_A 470 DSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD 549 (680)
T ss_dssp TCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC
T ss_pred ccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC
Confidence 4688899999999999999998 37789999999999999987532 23788999999999999999
Q ss_pred ccCCcccccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCC-C-CCccCccccCCCCccccCCC
Q 038098 143 GSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNK-G-PFRNFSTESFEGNELLCGMP 217 (580)
Q Consensus 143 ~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~-~~~~l~~~~~~~n~~~c~~p 217 (580)
...+..|.++++|+.|+|++|++++..+..|..+++|+.|++++|++++.++.. . .++++..+++.+|+|.|+++
T Consensus 550 ~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 550 EIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred CCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 544567999999999999999999877888899999999999999999988764 2 57889999999999999866
No 283
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.92 E-value=2.8e-25 Score=220.49 Aligned_cols=212 Identities=23% Similarity=0.263 Sum_probs=186.9
Q ss_pred CccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCC--CccccCCCCCcEEEcCCCCCCCC
Q 038098 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFV--PACFGNLTNLRNLYLGSNKLTSI 79 (580)
Q Consensus 2 N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~l~~N~l~~l 79 (580)
++++ .+|..+. ++|++|+|++|.++...++.|.++++|++|+|++|.++... +..+..+++|++|+|++|+++.+
T Consensus 17 ~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~l 93 (306)
T 2z66_A 17 KGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITM 93 (306)
T ss_dssp SCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEEEE
T ss_pred CCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccccC
Confidence 3444 5665554 79999999999999666667899999999999999998442 56778899999999999999999
Q ss_pred CCCCcCCCCCceEeCcCCcc-------cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccc-cCCccccc
Q 038098 80 PSTLWNLKDILYLDLSSNFL-------LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQG-SIPDSIGD 151 (580)
Q Consensus 80 p~~~~~l~~L~~L~l~~n~l-------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~ 151 (580)
|..+..+++|++|++++|++ .+..+++|+.|++++|.+++..+..|..+++|+.|+|++|.+++ .+|..+..
T Consensus 94 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 173 (306)
T 2z66_A 94 SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTE 173 (306)
T ss_dssp EEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTT
T ss_pred hhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhh
Confidence 98899999999999999998 26678999999999999998889999999999999999999986 57899999
Q ss_pred ccccccccccccccCCCccccccccCcccEEEccCCcccCCCCC-CCCCccCccccCCCCccccCC
Q 038098 152 LINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPN-KGPFRNFSTESFEGNELLCGM 216 (580)
Q Consensus 152 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~~~~l~~~~~~~n~~~c~~ 216 (580)
+++|+.|+|++|++++..|..+..+++|+.|++++|++++.++. ...+++++.+++++|......
T Consensus 174 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 239 (306)
T 2z66_A 174 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSK 239 (306)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCS
T ss_pred CcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccC
Confidence 99999999999999988899999999999999999999987763 466788999999999875543
No 284
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.92 E-value=1.4e-24 Score=218.02 Aligned_cols=209 Identities=25% Similarity=0.272 Sum_probs=183.2
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCC--
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTS-- 78 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-- 78 (580)
+|+|+++.|.+|.++++|++|+|++|.++ .+|..+. ++|++|++++|.++.+.+..|.++++|++|++++|+++.
T Consensus 87 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 163 (332)
T 2ft3_A 87 NNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSG 163 (332)
T ss_dssp SSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGG
T ss_pred CCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCC
Confidence 58899999999999999999999999999 5665554 799999999999998888889999999999999999974
Q ss_pred -CCCCCcCCCCCceEeCcCCccc---ccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccc
Q 038098 79 -IPSTLWNLKDILYLDLSSNFLL---IGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLIN 154 (580)
Q Consensus 79 -lp~~~~~l~~L~~L~l~~n~l~---~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 154 (580)
.|..+..+ +|++|++++|++. ..-.++|+.|++++|.+++..+..|..+++|+.|+|++|.+++..+..|..+++
T Consensus 164 ~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 242 (332)
T 2ft3_A 164 FEPGAFDGL-KLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPT 242 (332)
T ss_dssp SCTTSSCSC-CCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTT
T ss_pred CCcccccCC-ccCEEECcCCCCCccCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCC
Confidence 45566667 9999999999983 122368999999999999998899999999999999999999877888999999
Q ss_pred cccccccccccCCCccccccccCcccEEEccCCcccCCCCCCC-------CCccCccccCCCCcccc
Q 038098 155 LKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKG-------PFRNFSTESFEGNELLC 214 (580)
Q Consensus 155 L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~-------~~~~l~~~~~~~n~~~c 214 (580)
|+.|+|++|+++ .+|..+..+++|+.|++++|++++..+... ....+..+++.+|++.+
T Consensus 243 L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~ 308 (332)
T 2ft3_A 243 LRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPY 308 (332)
T ss_dssp CCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCG
T ss_pred CCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccc
Confidence 999999999999 788889999999999999999998776431 13556778889998764
No 285
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.92 E-value=7.6e-26 Score=225.03 Aligned_cols=207 Identities=23% Similarity=0.249 Sum_probs=173.8
Q ss_pred Ccc-ccCCCcccC-------CCCCCCEEeccCCcCCCCCchhh--hCCCCCceeeCCCCcCCcCCCccccCC-----CCC
Q 038098 2 NNL-NGSIPIAVG-------KLQKLQLLSLEDNQLEGSIPDDL--CRLAALFELDSGGNKLDGFVPACFGNL-----TNL 66 (580)
Q Consensus 2 N~~-~~~~p~~~~-------~l~~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L 66 (580)
|++ ...+|..+. ++++|++|+|++|.+++..|..+ ..+++|++|+|++|++++. |..|..+ ++|
T Consensus 73 n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L 151 (312)
T 1wwl_A 73 LTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGL 151 (312)
T ss_dssp EEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTC
T ss_pred ccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCC
Confidence 444 234555555 78999999999999998888876 8899999999999999977 8888777 999
Q ss_pred cEEEcCCCCCCCCC-CCCcCCCCCceEeCcCCcc----------cccCCCcccEEeCCCCcCCCC---CCcccCCccccc
Q 038098 67 RNLYLGSNKLTSIP-STLWNLKDILYLDLSSNFL----------LIGNLKVLVQVDLSMNNFSDV---IPTTIGGLKDLQ 132 (580)
Q Consensus 67 ~~L~l~~N~l~~lp-~~~~~l~~L~~L~l~~n~l----------~~~~l~~L~~L~l~~N~l~~~---~~~~~~~l~~L~ 132 (580)
++|+|++|+|+.++ ..+..+++|++|+|++|++ .+..+++|+.|++++|.+++. ....+..+++|+
T Consensus 152 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~ 231 (312)
T 1wwl_A 152 KVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQ 231 (312)
T ss_dssp CEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCS
T ss_pred cEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCC
Confidence 99999999999987 6788999999999999985 127889999999999999843 224456789999
Q ss_pred eeccccccccccCC-cccccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCCCc
Q 038098 133 YLFLEYNRLQGSIP-DSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNE 211 (580)
Q Consensus 133 ~L~l~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~ 211 (580)
.|+|++|.+++..| ..+..+++|+.|+|++|+|+ .+|..+. ++|+.|++++|++++. |....+++++.+++.+|+
T Consensus 232 ~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~ 307 (312)
T 1wwl_A 232 GLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PSPDELPQVGNLSLKGNP 307 (312)
T ss_dssp EEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CCTTTSCEEEEEECTTCT
T ss_pred EEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hhHhhCCCCCEEeccCCC
Confidence 99999999997665 45667899999999999999 7777766 8999999999999988 447788889999999998
Q ss_pred cc
Q 038098 212 LL 213 (580)
Q Consensus 212 ~~ 213 (580)
+.
T Consensus 308 l~ 309 (312)
T 1wwl_A 308 FL 309 (312)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 286
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.92 E-value=3.6e-25 Score=233.89 Aligned_cols=217 Identities=21% Similarity=0.201 Sum_probs=169.3
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP 80 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp 80 (580)
+|+++++.|..|..+++|++|+|++|.++...+..|..+++|++|+|++|.++++.+..|.++++|+.|+|++|+++.++
T Consensus 113 ~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~ 192 (477)
T 2id5_A 113 ENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIR 192 (477)
T ss_dssp TSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEEC
T ss_pred CCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeC
Confidence 46677777777777777777777777777666777777777777777777777666566777777777777777766654
Q ss_pred C-CCcCCC------------------------CCceEeCcCCcc------cccCCCcccEEeCCCCcCCCCCCcccCCcc
Q 038098 81 S-TLWNLK------------------------DILYLDLSSNFL------LIGNLKVLVQVDLSMNNFSDVIPTTIGGLK 129 (580)
Q Consensus 81 ~-~~~~l~------------------------~L~~L~l~~n~l------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 129 (580)
. .+..++ +|++|+|++|++ .+..+++|+.|+|++|.++++.+..|..++
T Consensus 193 ~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 272 (477)
T 2id5_A 193 DYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELL 272 (477)
T ss_dssp TTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCT
T ss_pred hhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccc
Confidence 3 344444 455555555655 266889999999999999999889999999
Q ss_pred ccceeccccccccccCCcccccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCC
Q 038098 130 DLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEG 209 (580)
Q Consensus 130 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~ 209 (580)
+|+.|+|++|.+++..|..|..+++|+.|+|++|++++..+..|..+++|+.|++++|+++|.++..-.+.......+.+
T Consensus 273 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~ 352 (477)
T 2id5_A 273 RLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNR 352 (477)
T ss_dssp TCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTT
T ss_pred cCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCc
Confidence 99999999999998889999999999999999999998888889999999999999999999876432223334456667
Q ss_pred CccccCCC
Q 038098 210 NELLCGMP 217 (580)
Q Consensus 210 n~~~c~~p 217 (580)
+...|..|
T Consensus 353 ~~~~C~~p 360 (477)
T 2id5_A 353 QQPTCATP 360 (477)
T ss_dssp CCCBEEES
T ss_pred cCceeCCc
Confidence 77777655
No 287
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.92 E-value=4e-25 Score=227.24 Aligned_cols=211 Identities=24% Similarity=0.270 Sum_probs=180.0
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP 80 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp 80 (580)
+|.++.+.+..|..+++|++|+|++|.++...+..|..+++|++|+|++|.++++.|..|.++++|++|+|++|+|+.+|
T Consensus 54 ~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~ 133 (390)
T 3o6n_A 54 NSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLP 133 (390)
T ss_dssp SCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCC
Confidence 35566555556889999999999999999888889999999999999999999888889999999999999999999999
Q ss_pred CCC-cCCCCCceEeCcCCcc------cccCCCcccEEeCCCCcCCCCCCcccCCc-------------------------
Q 038098 81 STL-WNLKDILYLDLSSNFL------LIGNLKVLVQVDLSMNNFSDVIPTTIGGL------------------------- 128 (580)
Q Consensus 81 ~~~-~~l~~L~~L~l~~n~l------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l------------------------- 128 (580)
..+ .++++|++|+|++|++ .+..+++|+.|++++|.+++.....+..+
T Consensus 134 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~ 213 (390)
T 3o6n_A 134 RGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDAS 213 (390)
T ss_dssp TTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECC
T ss_pred HHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccCCCCcceEEECC
Confidence 764 6899999999999998 36788999999999999987654444333
Q ss_pred ------------cccceeccccccccccCCcccccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCC
Q 038098 129 ------------KDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNK 196 (580)
Q Consensus 129 ------------~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 196 (580)
++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++..|..+..+++|+.|++++|++++.+...
T Consensus 214 ~n~l~~~~~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 291 (390)
T 3o6n_A 214 HNSINVVRGPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYG 291 (390)
T ss_dssp SSCCCEEECCCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSS
T ss_pred CCeeeeccccccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcccCccc
Confidence 2466666666666632 46788999999999999999888999999999999999999999987777
Q ss_pred CCCccCccccCCCCccc
Q 038098 197 GPFRNFSTESFEGNELL 213 (580)
Q Consensus 197 ~~~~~l~~~~~~~n~~~ 213 (580)
..+++++.+++++|...
T Consensus 292 ~~l~~L~~L~L~~n~l~ 308 (390)
T 3o6n_A 292 QPIPTLKVLDLSHNHLL 308 (390)
T ss_dssp SCCTTCCEEECCSSCCC
T ss_pred CCCCCCCEEECCCCcce
Confidence 77899999999998764
No 288
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.92 E-value=1.1e-24 Score=238.62 Aligned_cols=95 Identities=21% Similarity=0.320 Sum_probs=71.4
Q ss_pred cccCCccccceeccccccccccCCcccccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCC-CCC-c
Q 038098 123 TTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNK-GPF-R 200 (580)
Q Consensus 123 ~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~-~ 200 (580)
..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|++++|+|++.+|.. ..+ .
T Consensus 488 ~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 567 (635)
T 4g8a_A 488 DIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPS 567 (635)
T ss_dssp SCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCT
T ss_pred hhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhC
Confidence 34555666777777777777777777888888888888888888777777888888888888888888877654 334 5
Q ss_pred cCccccCCCCccccCCC
Q 038098 201 NFSTESFEGNELLCGMP 217 (580)
Q Consensus 201 ~l~~~~~~~n~~~c~~p 217 (580)
+++.+++.+|||.|++.
T Consensus 568 ~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 568 SLAFLNLTQNDFACTCE 584 (635)
T ss_dssp TCCEEECTTCCBCCSGG
T ss_pred cCCEEEeeCCCCcccCC
Confidence 67778888888888744
No 289
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.92 E-value=4.7e-25 Score=240.28 Aligned_cols=205 Identities=23% Similarity=0.276 Sum_probs=136.0
Q ss_pred cCCCCCCCEEeccCCcCCCCC--chhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCC-C-CCcCCC
Q 038098 12 VGKLQKLQLLSLEDNQLEGSI--PDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP-S-TLWNLK 87 (580)
Q Consensus 12 ~~~l~~L~~L~L~~n~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp-~-~~~~l~ 87 (580)
|..+++|++|+|++|.+++.. +..+..+++|++|+|++|.+.+..|..|..+++|++|+|++|+++..+ . .+..++
T Consensus 346 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~ 425 (606)
T 3t6q_A 346 LENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLH 425 (606)
T ss_dssp TTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCT
T ss_pred hhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcc
Confidence 555555555555555555433 455566666666666666666555666666666666666666665532 2 355666
Q ss_pred CCceEeCcCCcc------cccCCCcccEEeCCCCcCCCC---CCcccCCccccceeccccccccccCCcccccccccccc
Q 038098 88 DILYLDLSSNFL------LIGNLKVLVQVDLSMNNFSDV---IPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSL 158 (580)
Q Consensus 88 ~L~~L~l~~n~l------~~~~l~~L~~L~l~~N~l~~~---~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 158 (580)
+|++|++++|.+ .+..+++|+.|++++|.+++. .+..+..+++|+.|+|++|.+++..|..|..+++|+.|
T Consensus 426 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 505 (606)
T 3t6q_A 426 LLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHV 505 (606)
T ss_dssp TCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEE
Confidence 666666666665 245566777777777776652 23456667777777777777776667777777777777
Q ss_pred cccccccCCCccccccccCcccEEEccCCcccCCCCCC-CCCccCccccCCCCccccCCC
Q 038098 159 NLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNK-GPFRNFSTESFEGNELLCGMP 217 (580)
Q Consensus 159 ~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~~~~~~n~~~c~~p 217 (580)
+|++|++++..|..+..+++| .|++++|++++.+|.. ..++.++.+++.+|++.|+++
T Consensus 506 ~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 506 DLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp ECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred ECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 777777777777777777777 7777777777766653 456777888888888888754
No 290
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.92 E-value=3.8e-25 Score=219.96 Aligned_cols=186 Identities=20% Similarity=0.228 Sum_probs=165.9
Q ss_pred CCccccCCCccc--CCCCCCCEEeccCCcCCCCCchhhhCC-----CCCceeeCCCCcCCcCCCccccCCCCCcEEEcCC
Q 038098 1 GNNLNGSIPIAV--GKLQKLQLLSLEDNQLEGSIPDDLCRL-----AALFELDSGGNKLDGFVPACFGNLTNLRNLYLGS 73 (580)
Q Consensus 1 ~N~~~~~~p~~~--~~l~~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 73 (580)
+|+|++.+|..+ ..+++|++|+|++|.+++. |..+..+ ++|++|+|++|+|++..+..|+++++|++|+|++
T Consensus 104 ~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 182 (312)
T 1wwl_A 104 NLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSD 182 (312)
T ss_dssp EEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCS
T ss_pred CCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCC
Confidence 478999999987 8999999999999999976 8888887 9999999999999998889999999999999999
Q ss_pred CCCCC---CCCCC--cCCCCCceEeCcCCccc---------ccCCCcccEEeCCCCcCCCCCC-cccCCccccceecccc
Q 038098 74 NKLTS---IPSTL--WNLKDILYLDLSSNFLL---------IGNLKVLVQVDLSMNNFSDVIP-TTIGGLKDLQYLFLEY 138 (580)
Q Consensus 74 N~l~~---lp~~~--~~l~~L~~L~l~~n~l~---------~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~l~~ 138 (580)
|++.. +|..+ ..+++|++|+|++|++. +.++++|+.|++++|.+++..| ..+..+++|+.|+|++
T Consensus 183 N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~ 262 (312)
T 1wwl_A 183 NPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSF 262 (312)
T ss_dssp CTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTT
T ss_pred CCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCC
Confidence 99865 34333 78999999999999983 3477999999999999998774 5667789999999999
Q ss_pred ccccccCCcccccccccccccccccccCCCccccccccCcccEEEccCCcccCC
Q 038098 139 NRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGE 192 (580)
Q Consensus 139 n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~ 192 (580)
|.|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|++++|++++.
T Consensus 263 N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 263 TGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp SCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred CccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 9999 7888776 8999999999999966 65 89999999999999999863
No 291
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.92 E-value=1.2e-24 Score=228.51 Aligned_cols=99 Identities=23% Similarity=0.220 Sum_probs=57.3
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCC-CCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCC-
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEG-SIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTS- 78 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~- 78 (580)
+|+|+++.|.+|.++++|++|+|++|.+.+ ..++.|.++++|++|+|++|.+++..|..|+++++|++|+|++|+++.
T Consensus 39 ~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 118 (455)
T 3v47_A 39 LNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGA 118 (455)
T ss_dssp SSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTH
T ss_pred CCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCcc
Confidence 356666666666666666666666666642 234556666666666666666665556666666666666666666554
Q ss_pred CCC--CCcCCCCCceEeCcCCcc
Q 038098 79 IPS--TLWNLKDILYLDLSSNFL 99 (580)
Q Consensus 79 lp~--~~~~l~~L~~L~l~~n~l 99 (580)
+|. .+..+++|++|+|++|++
T Consensus 119 ~~~~~~~~~l~~L~~L~L~~n~l 141 (455)
T 3v47_A 119 VLSGNFFKPLTSLEMLVLRDNNI 141 (455)
T ss_dssp HHHSSTTTTCTTCCEEECCSSBC
T ss_pred ccCcccccCcccCCEEECCCCcc
Confidence 221 244455555555555554
No 292
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.92 E-value=7.4e-25 Score=238.71 Aligned_cols=206 Identities=24% Similarity=0.259 Sum_probs=182.5
Q ss_pred ccCCCCCCCEEeccCCcCCCC--CchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCC--CCcCC
Q 038098 11 AVGKLQKLQLLSLEDNQLEGS--IPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPS--TLWNL 86 (580)
Q Consensus 11 ~~~~l~~L~~L~L~~n~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~--~~~~l 86 (580)
.+..+++|++|+|++|.+++. .|..+..+++|++|+|++|.+++ .|..|..+++|++|++++|+++.++. .+..+
T Consensus 345 ~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l 423 (606)
T 3vq2_A 345 KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSL 423 (606)
T ss_dssp CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTC
T ss_pred hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhcc
Confidence 567788888888888888755 37888999999999999999885 55889999999999999999988654 67789
Q ss_pred CCCceEeCcCCcc------cccCCCcccEEeCCCCcCCC-CCCcccCCccccceeccccccccccCCccccccccccccc
Q 038098 87 KDILYLDLSSNFL------LIGNLKVLVQVDLSMNNFSD-VIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLN 159 (580)
Q Consensus 87 ~~L~~L~l~~n~l------~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 159 (580)
++|++|++++|.+ .+.++++|+.|++++|.+++ ..|..|..+++|+.|+|++|.+++..|..|..+++|+.|+
T Consensus 424 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 503 (606)
T 3vq2_A 424 EKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLN 503 (606)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred ccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEE
Confidence 9999999999998 36788999999999999987 4688899999999999999999988899999999999999
Q ss_pred ccccccCCCccccccccCcccEEEccCCcccCCCCCCCCCc-cCccccCCCCccccCCC
Q 038098 160 LSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFR-NFSTESFEGNELLCGMP 217 (580)
Q Consensus 160 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~-~l~~~~~~~n~~~c~~p 217 (580)
|++|++++..|..+..+++|+.|++++|+++..++....++ ++..+++.+|++.|+++
T Consensus 504 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 504 MSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp CCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred CCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 99999998889999999999999999999998777666665 58899999999999866
No 293
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.91 E-value=3e-25 Score=221.31 Aligned_cols=200 Identities=22% Similarity=0.193 Sum_probs=108.3
Q ss_pred ccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCC--------
Q 038098 11 AVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPST-------- 82 (580)
Q Consensus 11 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~-------- 82 (580)
.+..+++|++|+|++|.|++..|+.|..+++|++|+|++|.+++..+ |..+++|++|+|++|+|+.++..
T Consensus 29 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l 106 (317)
T 3o53_A 29 LRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHA 106 (317)
T ss_dssp HHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEECTTCCEEEC
T ss_pred HhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccCCCCcCEEEC
Confidence 34445566666666666665555566666666666666666654433 56666666666666665554321
Q ss_pred ---------CcCCCCCceEeCcCCcc------cccCCCcccEEeCCCCcCCCCCCccc-CCccccceeccccccccccCC
Q 038098 83 ---------LWNLKDILYLDLSSNFL------LIGNLKVLVQVDLSMNNFSDVIPTTI-GGLKDLQYLFLEYNRLQGSIP 146 (580)
Q Consensus 83 ---------~~~l~~L~~L~l~~n~l------~~~~l~~L~~L~l~~N~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~p 146 (580)
...+++|++|++++|++ .+..+++|+.|++++|.+++..+..+ ..+++|+.|+|++|.+++. +
T Consensus 107 ~~n~l~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~ 185 (317)
T 3o53_A 107 ANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K 185 (317)
T ss_dssp CSSCCSEEEECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E
T ss_pred CCCccCCcCccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c
Confidence 01134455555555554 23345555555555555555444444 2455555555555555532 2
Q ss_pred cccccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCCCccccC
Q 038098 147 DSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNELLCG 215 (580)
Q Consensus 147 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~c~ 215 (580)
. ...+++|+.|+|++|++++ +|..+..+++|+.|++++|+++..++....++++..+++.+|++.|+
T Consensus 186 ~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 186 G-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp C-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBHH
T ss_pred c-ccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccCc
Confidence 2 2235556666666666663 33335556666666666666665544445555566666666665543
No 294
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.91 E-value=1.4e-24 Score=235.53 Aligned_cols=210 Identities=23% Similarity=0.263 Sum_probs=164.3
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP 80 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp 80 (580)
+|.++++.+..|..+++|++|+|++|.|++..|..|+.+++|++|+|++|.|+++.|..|+++++|++|+|++|+|+.+|
T Consensus 60 ~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~ 139 (597)
T 3oja_B 60 NSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLP 139 (597)
T ss_dssp SCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCC
Confidence 35566665667888999999999999999888889999999999999999999988889999999999999999999998
Q ss_pred CCC-cCCCCCceEeCcCCcc------cccCCCcccEEeCCCCcCCCCCCcccCCc-------------------------
Q 038098 81 STL-WNLKDILYLDLSSNFL------LIGNLKVLVQVDLSMNNFSDVIPTTIGGL------------------------- 128 (580)
Q Consensus 81 ~~~-~~l~~L~~L~l~~n~l------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l------------------------- 128 (580)
..+ .++++|++|+|++|.+ .+.++++|+.|++++|.+++.....+..+
T Consensus 140 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls 219 (597)
T 3oja_B 140 RGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDAS 219 (597)
T ss_dssp TTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECC
T ss_pred HHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeecc
Confidence 764 7899999999999998 37788999999999999987654443332
Q ss_pred ------------cccceeccccccccccCCcccccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCC
Q 038098 129 ------------KDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNK 196 (580)
Q Consensus 129 ------------~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 196 (580)
++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..+..+++|+.|++++|.+++.+...
T Consensus 220 ~n~l~~~~~~~~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~ 297 (597)
T 3oja_B 220 HNSINVVRGPVNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYG 297 (597)
T ss_dssp SSCCCEEECSCCSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEECSS
T ss_pred CCcccccccccCCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCCccc
Confidence 124445555555543 245666777777777777777666777777777777777777777765555
Q ss_pred CCCccCccccCCCCcc
Q 038098 197 GPFRNFSTESFEGNEL 212 (580)
Q Consensus 197 ~~~~~l~~~~~~~n~~ 212 (580)
..++.+..+++++|..
T Consensus 298 ~~l~~L~~L~Ls~N~l 313 (597)
T 3oja_B 298 QPIPTLKVLDLSHNHL 313 (597)
T ss_dssp SCCTTCCEEECCSSCC
T ss_pred ccCCCCcEEECCCCCC
Confidence 5566777777776654
No 295
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.91 E-value=3.2e-24 Score=233.64 Aligned_cols=212 Identities=18% Similarity=0.158 Sum_probs=173.1
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCC-
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSI- 79 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~l- 79 (580)
+|+|+++.|.+|.++++|++|+|++|.+++..|+.|.++++|++|+|++|.+++..|..|+++++|++|+|++|+|+.+
T Consensus 42 ~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~ 121 (606)
T 3t6q_A 42 FNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSID 121 (606)
T ss_dssp TCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGG
T ss_pred CCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCC
Confidence 5888888889999999999999999999988899999999999999999999988888999999999999999999987
Q ss_pred CCCCcCCCCCceEeCcCCccc------ccCCCcccEEeCCCCcCCCCCCcccCCccccc--eeccccccccccCCccccc
Q 038098 80 PSTLWNLKDILYLDLSSNFLL------IGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQ--YLFLEYNRLQGSIPDSIGD 151 (580)
Q Consensus 80 p~~~~~l~~L~~L~l~~n~l~------~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~--~L~l~~n~l~~~~p~~~~~ 151 (580)
|..+.++++|++|+|++|++. +..+++|+.|++++|.+++..+..|..+++|+ .|++++|.+++..|..|..
T Consensus 122 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~ 201 (606)
T 3t6q_A 122 FIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDS 201 (606)
T ss_dssp GSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTT
T ss_pred cchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhh
Confidence 567888999999999999882 34578899999999999888888888888888 7888888888666554432
Q ss_pred c---------------------------------------------------cccccccccccccCCCccccccccCccc
Q 038098 152 L---------------------------------------------------INLKSLNLSNNNLSGTIPISLEKLLDLK 180 (580)
Q Consensus 152 l---------------------------------------------------~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 180 (580)
. .+|+.|++++|.+++..+..+..+++|+
T Consensus 202 ~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 281 (606)
T 3t6q_A 202 AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQ 281 (606)
T ss_dssp CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCS
T ss_pred ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCC
Confidence 1 1567777777777766676777778888
Q ss_pred EEEccCCcccCCCCCCCCCccCccccCCCCcc
Q 038098 181 DINVSFNKLEGEIPNKGPFRNFSTESFEGNEL 212 (580)
Q Consensus 181 ~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~ 212 (580)
.|++++|.++..++....+++++.+++.+|..
T Consensus 282 ~L~l~~n~l~~lp~~l~~l~~L~~L~l~~n~l 313 (606)
T 3t6q_A 282 ELDLTATHLSELPSGLVGLSTLKKLVLSANKF 313 (606)
T ss_dssp EEECTTSCCSCCCSSCCSCTTCCEEECTTCCC
T ss_pred EEeccCCccCCCChhhcccccCCEEECccCCc
Confidence 88888888776666666667777777777654
No 296
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=7.4e-24 Score=206.29 Aligned_cols=182 Identities=26% Similarity=0.342 Sum_probs=162.2
Q ss_pred ccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCC-CcCCCCC
Q 038098 11 AVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPST-LWNLKDI 89 (580)
Q Consensus 11 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~-~~~l~~L 89 (580)
.+..+++|+.|++++|.++ .+ +.+..+++|++|+|++|.+++. ..+..+++|++|+|++|+|+.++.. +..+++|
T Consensus 36 ~~~~l~~L~~L~l~~~~i~-~~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 111 (272)
T 3rfs_A 36 TQNELNSIDQIIANNSDIK-SV-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNL 111 (272)
T ss_dssp CHHHHTTCCEEECTTSCCC-CC-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred ccccccceeeeeeCCCCcc-cc-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCC
Confidence 4667899999999999998 33 4588999999999999999964 4799999999999999999998764 6789999
Q ss_pred ceEeCcCCccc------ccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCccccccccccccccccc
Q 038098 90 LYLDLSSNFLL------IGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNN 163 (580)
Q Consensus 90 ~~L~l~~n~l~------~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N 163 (580)
++|+|++|++. +..+++|+.|++++|.+++.++..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|
T Consensus 112 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 112 KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence 99999999982 678899999999999999888888899999999999999999777777899999999999999
Q ss_pred ccCCCccccccccCcccEEEccCCcccCCCCCC
Q 038098 164 NLSGTIPISLEKLLDLKDINVSFNKLEGEIPNK 196 (580)
Q Consensus 164 ~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 196 (580)
++++..+..+..+++|+.|++++|+++|.+|..
T Consensus 192 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l 224 (272)
T 3rfs_A 192 QLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGI 224 (272)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred cCCccCHHHHhCCcCCCEEEccCCCccccCcHH
Confidence 999888888899999999999999999887754
No 297
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=1.7e-23 Score=201.19 Aligned_cols=177 Identities=25% Similarity=0.303 Sum_probs=150.5
Q ss_pred CCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCC-CCcCCCCCceEeC
Q 038098 16 QKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPS-TLWNLKDILYLDL 94 (580)
Q Consensus 16 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~-~~~~l~~L~~L~l 94 (580)
.+.++++++++.++ .+|..+. ++|++|+|++|.++++.+..|.++++|++|+|++|+|+.++. .+..+++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 35678888888887 5665554 578888888888888888888888888888888888888765 4677888888888
Q ss_pred cCCcc------cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccccccccccccCCC
Q 038098 95 SSNFL------LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGT 168 (580)
Q Consensus 95 ~~n~l------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 168 (580)
++|++ .+..+++|+.|+|++|.++++++..|..+++|+.|+|++|.|++..+..|..+++|+.|+|++|++++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 88887 356788999999999999988888899999999999999999976677899999999999999999988
Q ss_pred ccccccccCcccEEEccCCcccCCCCC
Q 038098 169 IPISLEKLLDLKDINVSFNKLEGEIPN 195 (580)
Q Consensus 169 ~~~~~~~l~~L~~l~l~~N~l~~~~~~ 195 (580)
.+..+..+++|+.|++++|++++....
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c~~~~ 197 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDCSRCE 197 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCTTSTT
T ss_pred CHHHHhCCCCCCEEEeeCCceeCCccc
Confidence 888899999999999999999987443
No 298
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=2.7e-24 Score=205.30 Aligned_cols=197 Identities=16% Similarity=0.167 Sum_probs=170.8
Q ss_pred CCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCc-CCcCCCccccCCCCCcEEEcCC-CCCCCCCC-CC
Q 038098 7 SIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNK-LDGFVPACFGNLTNLRNLYLGS-NKLTSIPS-TL 83 (580)
Q Consensus 7 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~l~~-N~l~~lp~-~~ 83 (580)
.+|. +. ++|++|+|++|+|++..+..|..+++|++|+|++|. ++.+.+..|.++++|++|+|++ |+|+.+|. .+
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 5665 43 489999999999998788899999999999999997 9988888999999999999998 99999885 56
Q ss_pred cCCCCCceEeCcCCccc----ccCCCccc---EEeCCCC-cCCCCCCcccCCccccc-eeccccccccccCCc-cccccc
Q 038098 84 WNLKDILYLDLSSNFLL----IGNLKVLV---QVDLSMN-NFSDVIPTTIGGLKDLQ-YLFLEYNRLQGSIPD-SIGDLI 153 (580)
Q Consensus 84 ~~l~~L~~L~l~~n~l~----~~~l~~L~---~L~l~~N-~l~~~~~~~~~~l~~L~-~L~l~~n~l~~~~p~-~~~~l~ 153 (580)
.++++|++|++++|++. +..+++|+ .|++++| .++++.+..|.++++|+ .|++++|.++ .+|. .|.. +
T Consensus 102 ~~l~~L~~L~l~~n~l~~lp~~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~-~ 179 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKMFPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG-T 179 (239)
T ss_dssp ECCTTCCEEEEEEECCCSCCCCTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT-C
T ss_pred CCCCCCCEEeCCCCCCccccccccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC-C
Confidence 78999999999999983 56777787 9999999 99988888899999999 9999999999 5554 4544 8
Q ss_pred ccccccccccc-cCCCcccccccc-CcccEEEccCCcccCCCCCCCCCccCccccCCCC
Q 038098 154 NLKSLNLSNNN-LSGTIPISLEKL-LDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGN 210 (580)
Q Consensus 154 ~L~~L~l~~N~-l~~~~~~~~~~l-~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n 210 (580)
+|+.|+|++|+ +++..+..|..+ ++|+.|++++|+++..++. .++.++.+.+.++
T Consensus 180 ~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 180 KLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK--GLEHLKELIARNT 236 (239)
T ss_dssp EEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT--TCTTCSEEECTTC
T ss_pred CCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh--HhccCceeeccCc
Confidence 99999999995 997777889999 9999999999999987665 5677777766654
No 299
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.90 E-value=1.1e-24 Score=220.86 Aligned_cols=196 Identities=20% Similarity=0.206 Sum_probs=170.0
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCC-ccccCCCCCcEEEcCCC-CCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVP-ACFGNLTNLRNLYLGSN-KLTS 78 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N-~l~~ 78 (580)
+|+|+++.|.+|.++++|++|+|++|.|+...+..|.++++|++|+|++|+++.+.+ ..|.++++|++|++++| .++.
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~ 164 (353)
T 2z80_A 85 SNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTK 164 (353)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCE
T ss_pred CCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccc
Confidence 588999889999999999999999999997677779999999999999999996655 58999999999999999 5887
Q ss_pred CC-CCCcCCCCCceEeCcCCcc------cccCCCcccEEeCCCCcCCCCCCcccCCccccceecccccccccc-------
Q 038098 79 IP-STLWNLKDILYLDLSSNFL------LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGS------- 144 (580)
Q Consensus 79 lp-~~~~~l~~L~~L~l~~n~l------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~------- 144 (580)
++ ..+.++++|++|++++|++ .+..+++|++|++++|.++..++..+..+++|+.|+|++|.+++.
T Consensus 165 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 244 (353)
T 2z80_A 165 IQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELST 244 (353)
T ss_dssp ECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC----
T ss_pred cCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccc
Confidence 75 5788999999999999998 367889999999999999866555566789999999999999863
Q ss_pred ------------------------CCcccccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCC
Q 038098 145 ------------------------IPDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNK 196 (580)
Q Consensus 145 ------------------------~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 196 (580)
+|..+..+++|+.|+|++|+++...+..+..+++|+.|++++|+++|.++..
T Consensus 245 ~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~~l 320 (353)
T 2z80_A 245 GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 320 (353)
T ss_dssp --CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHHH
T ss_pred ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCCCc
Confidence 3445677899999999999999544444689999999999999999988743
No 300
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.90 E-value=1.1e-24 Score=237.63 Aligned_cols=204 Identities=20% Similarity=0.295 Sum_probs=177.5
Q ss_pred CCcccC--CCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCc-CCc-CCCccccCC------CCCcEEEcCCCCCC
Q 038098 8 IPIAVG--KLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNK-LDG-FVPACFGNL------TNLRNLYLGSNKLT 77 (580)
Q Consensus 8 ~p~~~~--~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~~l------~~L~~L~l~~N~l~ 77 (580)
+|++++ ++++|++|+|++|.+.+.+|+.|+++++|++|+|++|+ +++ .+|..++++ ++|++|+|++|+++
T Consensus 239 ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 239 KTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp TTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred CchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 899999 99999999999999998999999999999999999998 887 788888776 89999999999999
Q ss_pred CCCC--CCcCCCCCceEeCcCCccc-----ccCCCcccEEeCCCCcCCCCCCcccCCccc-cceeccccccccccCCccc
Q 038098 78 SIPS--TLWNLKDILYLDLSSNFLL-----IGNLKVLVQVDLSMNNFSDVIPTTIGGLKD-LQYLFLEYNRLQGSIPDSI 149 (580)
Q Consensus 78 ~lp~--~~~~l~~L~~L~l~~n~l~-----~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~-L~~L~l~~n~l~~~~p~~~ 149 (580)
.+|. .+.++++|++|+|++|++. +..+++|+.|++++|.++ .+|..+..+++ |+.|+|++|.++ .+|..+
T Consensus 319 ~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~ 396 (636)
T 4eco_A 319 TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIF 396 (636)
T ss_dssp SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCC
T ss_pred ccCchhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhh
Confidence 9998 8899999999999999884 567789999999999998 56777888988 999999999998 788877
Q ss_pred cccc--ccccccccccccCCCcccccc-------ccCcccEEEccCCcccCCCCCC-CCCccCccccCCCCccc
Q 038098 150 GDLI--NLKSLNLSNNNLSGTIPISLE-------KLLDLKDINVSFNKLEGEIPNK-GPFRNFSTESFEGNELL 213 (580)
Q Consensus 150 ~~l~--~L~~L~l~~N~l~~~~~~~~~-------~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~~~~~~n~~~ 213 (580)
..+. +|+.|++++|++++.+|..+. .+++|+.|++++|.++..++.. ..+++++.+++.+|...
T Consensus 397 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~ 470 (636)
T 4eco_A 397 DAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT 470 (636)
T ss_dssp CTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS
T ss_pred hhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC
Confidence 7654 899999999999988888888 7889999999999999665543 34678888888888765
No 301
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=7.5e-24 Score=210.48 Aligned_cols=195 Identities=21% Similarity=0.195 Sum_probs=143.1
Q ss_pred CCCCCEEeccCCcCCCCCchhh--hCCCCCceeeCCCCcCCcCCC----ccccCCCCCcEEEcCCCCCCCCC-CCCcCCC
Q 038098 15 LQKLQLLSLEDNQLEGSIPDDL--CRLAALFELDSGGNKLDGFVP----ACFGNLTNLRNLYLGSNKLTSIP-STLWNLK 87 (580)
Q Consensus 15 l~~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~l~~N~l~~lp-~~~~~l~ 87 (580)
+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|+|+.++ ..+..++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 4568888888888887777777 778888888888888876544 33456788888888888887765 4666788
Q ss_pred CCceEeCcCCccc----------ccCCCcccEEeCCCCcCCCCCCc---ccCCccccceeccccccccccCCcccccc--
Q 038098 88 DILYLDLSSNFLL----------IGNLKVLVQVDLSMNNFSDVIPT---TIGGLKDLQYLFLEYNRLQGSIPDSIGDL-- 152 (580)
Q Consensus 88 ~L~~L~l~~n~l~----------~~~l~~L~~L~l~~N~l~~~~~~---~~~~l~~L~~L~l~~n~l~~~~p~~~~~l-- 152 (580)
+|++|+|++|++. +..+++|++|+|++|.++...+. .+..+++|++|+|++|.|++..|..+..+
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 249 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMW 249 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCC
T ss_pred CCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccC
Confidence 8888888888751 25677888888888888643221 24567788888888888887667666665
Q ss_pred -cccccccccccccCCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCCCccc
Q 038098 153 -INLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNELL 213 (580)
Q Consensus 153 -~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~ 213 (580)
++|+.|+|++|+++ .+|..+. ++|+.|++++|++++.+ ....++.++.+++++|++.
T Consensus 250 ~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~-~~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 250 SSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAP-QPDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCC-CTTSCCCCSCEECSSTTTS
T ss_pred cCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCc-hhhhCCCccEEECcCCCCC
Confidence 58888888888888 5566554 68888888888888753 2456677778888888753
No 302
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.90 E-value=2.7e-24 Score=239.12 Aligned_cols=208 Identities=22% Similarity=0.293 Sum_probs=179.5
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCC-----------------CCchhhh--CCCCCceeeCCCCcCCcCCCcccc
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEG-----------------SIPDDLC--RLAALFELDSGGNKLDGFVPACFG 61 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~-----------------~~p~~~~--~l~~L~~L~L~~N~l~~~~~~~~~ 61 (580)
+|++++ +|.+|++|++|+.|+|++|.|++ .+|+.++ ++++|++|+|++|.+.+.+|..|+
T Consensus 434 ~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~ 512 (876)
T 4ecn_A 434 TNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLY 512 (876)
T ss_dssp SCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGG
T ss_pred cCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHh
Confidence 378888 89999999999999999999997 2888877 999999999999999999999999
Q ss_pred CCCCCcEEEcCCCC-CCC--CCCCCcCC-------CCCceEeCcCCcc-------cccCCCcccEEeCCCCcCCCCCCcc
Q 038098 62 NLTNLRNLYLGSNK-LTS--IPSTLWNL-------KDILYLDLSSNFL-------LIGNLKVLVQVDLSMNNFSDVIPTT 124 (580)
Q Consensus 62 ~l~~L~~L~l~~N~-l~~--lp~~~~~l-------~~L~~L~l~~n~l-------~~~~l~~L~~L~l~~N~l~~~~~~~ 124 (580)
++++|++|+|++|+ |+. +|..+..+ ++|++|+|++|++ .+.++++|+.|+|++|.++ .+| .
T Consensus 513 ~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~ 590 (876)
T 4ecn_A 513 DLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVR-HLE-A 590 (876)
T ss_dssp GCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTCTTCCEEECTTSCCC-BCC-C
T ss_pred CCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhhcCCCCCEEECCCCCcc-cch-h
Confidence 99999999999998 885 77655544 5999999999998 2668889999999999999 556 8
Q ss_pred cCCccccceeccccccccccCCcccccccc-cccccccccccCCCccccccccCc--ccEEEccCCcccCCCCCCC----
Q 038098 125 IGGLKDLQYLFLEYNRLQGSIPDSIGDLIN-LKSLNLSNNNLSGTIPISLEKLLD--LKDINVSFNKLEGEIPNKG---- 197 (580)
Q Consensus 125 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~~~~~~~l~~--L~~l~l~~N~l~~~~~~~~---- 197 (580)
|..+++|+.|+|++|.++ .+|..+..+++ |+.|+|++|+++ .+|..+..+.. |+.|++++|++++.+|...
T Consensus 591 ~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~ 668 (876)
T 4ecn_A 591 FGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMD 668 (876)
T ss_dssp CCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTT
T ss_pred hcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhc
Confidence 999999999999999999 88988999999 999999999999 78888877654 9999999999998776542
Q ss_pred --CCccCccccCCCCccc
Q 038098 198 --PFRNFSTESFEGNELL 213 (580)
Q Consensus 198 --~~~~l~~~~~~~n~~~ 213 (580)
...++..+++++|...
T Consensus 669 ~~~~~~L~~L~Ls~N~L~ 686 (876)
T 4ecn_A 669 DYKGINASTVTLSYNEIQ 686 (876)
T ss_dssp TCCCCCEEEEECCSSCCC
T ss_pred cccCCCcCEEEccCCcCC
Confidence 2346667777777653
No 303
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=6.8e-24 Score=202.47 Aligned_cols=183 Identities=17% Similarity=0.213 Sum_probs=163.3
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCc-CCCCCchhhhCCCCCceeeCCC-CcCCcCCCccccCCCCCcEEEcCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQ-LEGSIPDDLCRLAALFELDSGG-NKLDGFVPACFGNLTNLRNLYLGSNKLTS 78 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 78 (580)
+|+|+++.+.+|..+++|++|+|++|. ++.+.+..|.++++|++|+|++ |+|+++.+..|.++++|++|+|++|+++.
T Consensus 40 ~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~ 119 (239)
T 2xwt_C 40 ETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM 119 (239)
T ss_dssp SCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS
T ss_pred CCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc
Confidence 588998888899999999999999997 9877778999999999999999 99998888899999999999999999999
Q ss_pred CCCCCcCCCCCc---eEeCcCC-cc------cccCCCccc-EEeCCCCcCCCCCCcccCCccccceecccccc-ccccCC
Q 038098 79 IPSTLWNLKDIL---YLDLSSN-FL------LIGNLKVLV-QVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNR-LQGSIP 146 (580)
Q Consensus 79 lp~~~~~l~~L~---~L~l~~n-~l------~~~~l~~L~-~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~p 146 (580)
+|. +..+++|+ +|++++| ++ .+.++++|+ .|++++|.++.+++..|.. ++|+.|+|++|+ +++..+
T Consensus 120 lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~ 197 (239)
T 2xwt_C 120 FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDK 197 (239)
T ss_dssp CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECT
T ss_pred ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCH
Confidence 997 88888888 9999999 77 377899999 9999999999777777776 899999999995 996667
Q ss_pred cccccc-cccccccccccccCCCccccccccCcccEEEccCCc
Q 038098 147 DSIGDL-INLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNK 188 (580)
Q Consensus 147 ~~~~~l-~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~ 188 (580)
..|..+ ++|+.|++++|++++..+. .+++|+.|+++++.
T Consensus 198 ~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 198 DAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNTW 237 (239)
T ss_dssp TTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC-
T ss_pred HHhhccccCCcEEECCCCccccCChh---HhccCceeeccCcc
Confidence 889999 9999999999999954443 67789999998764
No 304
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.90 E-value=1.8e-23 Score=223.30 Aligned_cols=154 Identities=25% Similarity=0.271 Sum_probs=127.6
Q ss_pred cCCCCCcEEEcCCCCCCC-CCCCCcCCCCCceEeCcCCccc--------ccCCCcccEEeCCCCcCCC-CCCcccCCccc
Q 038098 61 GNLTNLRNLYLGSNKLTS-IPSTLWNLKDILYLDLSSNFLL--------IGNLKVLVQVDLSMNNFSD-VIPTTIGGLKD 130 (580)
Q Consensus 61 ~~l~~L~~L~l~~N~l~~-lp~~~~~l~~L~~L~l~~n~l~--------~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~ 130 (580)
..+++|++|+|++|+++. +|..+..+++|++|+|++|++. +..+++|+.|++++|.+++ +++..+..+++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 567788888888888887 6777888888999999888873 5678889999999999887 44455788889
Q ss_pred cceeccccccccccCCcccccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCC-CCCCccCccccCCC
Q 038098 131 LQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPN-KGPFRNFSTESFEG 209 (580)
Q Consensus 131 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~~~~l~~~~~~~ 209 (580)
|+.|+|++|.+++.+|..+. ++|+.|+|++|+++ .+|..+..+++|+.|++++|+++..++. ...++++..+++.+
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~ 477 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHT 477 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcC
Confidence 99999999998877776654 68999999999999 7777777999999999999999977765 56778888899999
Q ss_pred CccccCCC
Q 038098 210 NELLCGMP 217 (580)
Q Consensus 210 n~~~c~~p 217 (580)
|++.|+++
T Consensus 478 N~~~c~c~ 485 (520)
T 2z7x_B 478 NPWDCSCP 485 (520)
T ss_dssp SCBCCCHH
T ss_pred CCCcccCC
Confidence 99988743
No 305
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.90 E-value=1.9e-24 Score=215.51 Aligned_cols=195 Identities=23% Similarity=0.212 Sum_probs=143.7
Q ss_pred CCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCCcCCCCCceEeCc
Q 038098 16 QKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTLWNLKDILYLDLS 95 (580)
Q Consensus 16 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~~~l~~L~~L~l~ 95 (580)
..++.++++.+.+...++..+..+++|++|+|++|+|+++.|..|.++++|++|+|++|+++.++. +..+++|++|+|+
T Consensus 10 ~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~Ls 88 (317)
T 3o53_A 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLN 88 (317)
T ss_dssp TEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE-ETTCTTCCEEECC
T ss_pred CceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh-hhhcCCCCEEECc
Confidence 346677888888875666677778899999999999998888899999999999999999998765 7889999999999
Q ss_pred CCccc-c---------------------cCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccc-cc
Q 038098 96 SNFLL-I---------------------GNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIG-DL 152 (580)
Q Consensus 96 ~n~l~-~---------------------~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~-~l 152 (580)
+|++. + ..+++|+.|++++|.+++..+..+..+++|+.|+|++|.+++..+..+. .+
T Consensus 89 ~n~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 168 (317)
T 3o53_A 89 NNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASS 168 (317)
T ss_dssp SSEEEEEEECTTCCEEECCSSCCSEEEECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGT
T ss_pred CCccccccCCCCcCEEECCCCccCCcCccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhcc
Confidence 99882 2 2344566666666666666566666667777777777777655555543 56
Q ss_pred cccccccccccccCCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCCCccc
Q 038098 153 INLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNELL 213 (580)
Q Consensus 153 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~ 213 (580)
++|+.|+|++|.+++. +. ...+++|+.|++++|++++.++....++++..+++++|...
T Consensus 169 ~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 169 DTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp TTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC
T ss_pred CcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc
Confidence 6777777777777643 22 22466777777777777776666666677777777777654
No 306
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=1.1e-23 Score=208.69 Aligned_cols=191 Identities=24% Similarity=0.390 Sum_probs=154.0
Q ss_pred cCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCCcCCCCCce
Q 038098 12 VGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTLWNLKDILY 91 (580)
Q Consensus 12 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~~~l~~L~~ 91 (580)
+..+++|++|++++|.++. +| .+..+++|++|+|++|.++++.+ +..+++|++|+|++|+|+.++ .+..+++|++
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~~-~~~~l~~L~~ 111 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNVS-AIAGLQSIKT 111 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCCG-GGTTCTTCCE
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCch-hhcCCCCCCE
Confidence 4567888888998888874 44 57888888899999888886544 888888999999988888876 5778888889
Q ss_pred EeCcCCcc----cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccccccccccccCC
Q 038098 92 LDLSSNFL----LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSG 167 (580)
Q Consensus 92 L~l~~n~l----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 167 (580)
|+|++|++ .+..+++|+.|++++|.+++..+ +..+++|+.|+|++|.+++ ++. +..+++|+.|+|++|++++
T Consensus 112 L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 112 LDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKISD 187 (308)
T ss_dssp EECTTSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC
T ss_pred EECCCCCCCCchhhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCccCc
Confidence 99988888 36778888888999888887644 7788888889998888884 443 7888888889999888886
Q ss_pred CccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCCCcccc
Q 038098 168 TIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNELLC 214 (580)
Q Consensus 168 ~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~c 214 (580)
..+ +..+++|+.|++++|++++.++ ...++++..+++.+|++.+
T Consensus 188 ~~~--l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 188 ISP--LASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CGG--GGGCTTCCEEECTTSCCCBCGG-GTTCTTCCEEEEEEEEEEC
T ss_pred Chh--hcCCCCCCEEEccCCccCcccc-ccCCCCCCEEEccCCeeec
Confidence 544 7788888889999888887765 5667788888888888754
No 307
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.90 E-value=7.4e-24 Score=235.60 Aligned_cols=210 Identities=20% Similarity=0.289 Sum_probs=180.7
Q ss_pred CCccccCCCcccCCCCCCCEEec-cCCcCCCC------------------------------------------------
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSL-EDNQLEGS------------------------------------------------ 31 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L-~~n~l~~~------------------------------------------------ 31 (580)
+|+++|.+|++|++|++|++|+| ++|.+.+.
T Consensus 332 ~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~ 411 (876)
T 4ecn_A 332 GFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRN 411 (876)
T ss_dssp TTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTC
T ss_pred cCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhC
Confidence 58899999999999999999999 77754322
Q ss_pred ----------------------------CchhhhCCCCCceeeCCCCcCCc-----------------CCCcccc--CCC
Q 038098 32 ----------------------------IPDDLCRLAALFELDSGGNKLDG-----------------FVPACFG--NLT 64 (580)
Q Consensus 32 ----------------------------~p~~~~~l~~L~~L~L~~N~l~~-----------------~~~~~~~--~l~ 64 (580)
+|..|+++++|++|+|++|.|++ .+|..++ +++
T Consensus 412 ~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~ 491 (876)
T 4ecn_A 412 PEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLK 491 (876)
T ss_dssp TTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCT
T ss_pred ccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCC
Confidence 78889999999999999999998 3788877 999
Q ss_pred CCcEEEcCCCCCC-CCCCCCcCCCCCceEeCcCCc-cc-------c-------cCCCcccEEeCCCCcCCCCCCc--ccC
Q 038098 65 NLRNLYLGSNKLT-SIPSTLWNLKDILYLDLSSNF-LL-------I-------GNLKVLVQVDLSMNNFSDVIPT--TIG 126 (580)
Q Consensus 65 ~L~~L~l~~N~l~-~lp~~~~~l~~L~~L~l~~n~-l~-------~-------~~l~~L~~L~l~~N~l~~~~~~--~~~ 126 (580)
+|++|+|++|++. .+|..+.++++|++|+|++|+ +. + ..+++|+.|+|++|.++ .+|. .|.
T Consensus 492 ~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~ 570 (876)
T 4ecn_A 492 DLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQ 570 (876)
T ss_dssp TCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHT
T ss_pred CCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhh
Confidence 9999999999865 488889999999999999998 42 2 34459999999999999 5666 899
Q ss_pred CccccceeccccccccccCCcccccccccccccccccccCCCccccccccCc-ccEEEccCCcccCCCCCCCCCc--cCc
Q 038098 127 GLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKLLD-LKDINVSFNKLEGEIPNKGPFR--NFS 203 (580)
Q Consensus 127 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~-L~~l~l~~N~l~~~~~~~~~~~--~l~ 203 (580)
.+++|+.|+|++|.++ .+| .|..+++|+.|+|++|+++ .+|..+..+++ |+.|++++|+++..+....... .+.
T Consensus 571 ~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~~lp~~~~~~~~~~L~ 647 (876)
T 4ecn_A 571 KMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMG 647 (876)
T ss_dssp TCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCCSCCSCCCTTCSSCEE
T ss_pred cCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCCcCchhhhccccCCCC
Confidence 9999999999999999 888 8999999999999999999 88888999999 9999999999996554433333 377
Q ss_pred cccCCCCcccc
Q 038098 204 TESFEGNELLC 214 (580)
Q Consensus 204 ~~~~~~n~~~c 214 (580)
.+++++|....
T Consensus 648 ~L~Ls~N~l~g 658 (876)
T 4ecn_A 648 SVDFSYNKIGS 658 (876)
T ss_dssp EEECCSSCTTT
T ss_pred EEECcCCcCCC
Confidence 88888887644
No 308
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.90 E-value=2.3e-23 Score=230.00 Aligned_cols=195 Identities=22% Similarity=0.270 Sum_probs=178.7
Q ss_pred CCccccCCC-cccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCC--cCCCccccCCCCCcEEEcCCCCCC
Q 038098 1 GNNLNGSIP-IAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLD--GFVPACFGNLTNLRNLYLGSNKLT 77 (580)
Q Consensus 1 ~N~~~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~l~~N~l~ 77 (580)
+|++++.+| ..|..+++|++|+|++|++....+..|..+++|++|++++|.++ +..|..|.++++|++|+|++|+|+
T Consensus 414 ~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~ 493 (680)
T 1ziw_A 414 LNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIA 493 (680)
T ss_dssp SSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCC
T ss_pred CCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCC
Confidence 578887666 79999999999999999999889999999999999999999987 567889999999999999999999
Q ss_pred CCCC-CCcCCCCCceEeCcCCccc--------------ccCCCcccEEeCCCCcCCCCCCcccCCccccceecccccccc
Q 038098 78 SIPS-TLWNLKDILYLDLSSNFLL--------------IGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQ 142 (580)
Q Consensus 78 ~lp~-~~~~l~~L~~L~l~~n~l~--------------~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~ 142 (580)
.+|. .+.++++|++|+|++|++. +.++++|+.|+|++|.++.+++..|.++++|+.|+|++|+++
T Consensus 494 ~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~ 573 (680)
T 1ziw_A 494 NINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLN 573 (680)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred cCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCC
Confidence 9876 4778999999999999983 578899999999999999887788999999999999999999
Q ss_pred ccCCcccccccccccccccccccCCCcccccc-ccCcccEEEccCCcccCCCCC
Q 038098 143 GSIPDSIGDLINLKSLNLSNNNLSGTIPISLE-KLLDLKDINVSFNKLEGEIPN 195 (580)
Q Consensus 143 ~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~l~l~~N~l~~~~~~ 195 (580)
+..+..|..+++|+.|+|++|++++..+..+. .+++|+.|++++|++.|.++.
T Consensus 574 ~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 574 TLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred cCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 76677789999999999999999988887787 789999999999999999875
No 309
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.90 E-value=2e-23 Score=225.03 Aligned_cols=154 Identities=24% Similarity=0.278 Sum_probs=124.3
Q ss_pred cCCCCCcEEEcCCCCCCC-CCCCCcCCCCCceEeCcCCccc--------ccCCCcccEEeCCCCcCCC-CCCcccCCccc
Q 038098 61 GNLTNLRNLYLGSNKLTS-IPSTLWNLKDILYLDLSSNFLL--------IGNLKVLVQVDLSMNNFSD-VIPTTIGGLKD 130 (580)
Q Consensus 61 ~~l~~L~~L~l~~N~l~~-lp~~~~~l~~L~~L~l~~n~l~--------~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~ 130 (580)
..+++|++|+|++|+++. +|..+..+++|++|+|++|++. +.++++|+.|++++|.+++ +++..+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 566788888888888877 5677778888888888888873 5677888888888888887 55556778888
Q ss_pred cceeccccccccccCCcccccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCC-CCCCccCccccCCC
Q 038098 131 LQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPN-KGPFRNFSTESFEG 209 (580)
Q Consensus 131 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~~~~l~~~~~~~ 209 (580)
|+.|+|++|.+++.+|..+. ++|+.|+|++|+++ .+|..+..+++|+.|++++|+++..++. ...++.+..+++.+
T Consensus 430 L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~ 506 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHD 506 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCS
T ss_pred CCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecC
Confidence 88888888888776666554 68999999999998 6676666899999999999999987776 57788888999999
Q ss_pred CccccCCC
Q 038098 210 NELLCGMP 217 (580)
Q Consensus 210 n~~~c~~p 217 (580)
|++.|+++
T Consensus 507 N~~~c~c~ 514 (562)
T 3a79_B 507 NPWDCTCP 514 (562)
T ss_dssp CCBCCCHH
T ss_pred CCcCCCcc
Confidence 99988744
No 310
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.90 E-value=2.8e-24 Score=226.71 Aligned_cols=179 Identities=25% Similarity=0.239 Sum_probs=134.1
Q ss_pred CchhhhCCC----CCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCCcCCCCCceEeCcCCccc-c-----
Q 038098 32 IPDDLCRLA----ALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTLWNLKDILYLDLSSNFLL-I----- 101 (580)
Q Consensus 32 ~p~~~~~l~----~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~~~l~~L~~L~l~~n~l~-~----- 101 (580)
+|..+..+. +|++|+|++|.|+++.|..|..+++|++|+|++|+|+.+++ +..+++|++|+|++|.|. +
T Consensus 22 l~~~l~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~l~~~~~ 100 (487)
T 3oja_A 22 LKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQELLVGPS 100 (487)
T ss_dssp HHHHHHTTSTTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE-CTTCTTCCEEECCSSEEEEEEECTT
T ss_pred hHHHHHHhcccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc-cccCCCCCEEEecCCcCCCCCCCCC
Confidence 455665554 89999999999999888999999999999999999998765 888999999999999872 1
Q ss_pred ----------------cCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccc-cccccccccccccc
Q 038098 102 ----------------GNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIG-DLINLKSLNLSNNN 164 (580)
Q Consensus 102 ----------------~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~-~l~~L~~L~l~~N~ 164 (580)
..+++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++.+|..+. .+++|+.|+|++|.
T Consensus 101 L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~ 180 (487)
T 3oja_A 101 IETLHAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (487)
T ss_dssp CCEEECCSSCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred cCEEECcCCcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCc
Confidence 2345666667777777666666666777777777777777766666654 56777777777777
Q ss_pred cCCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCCCccc
Q 038098 165 LSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNELL 213 (580)
Q Consensus 165 l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~ 213 (580)
+++..+ +..+++|+.|++++|.+++.++....++.+..+++++|...
T Consensus 181 l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~ 227 (487)
T 3oja_A 181 IYDVKG--QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV 227 (487)
T ss_dssp CCEEEC--CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC
T ss_pred cccccc--cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCc
Confidence 774422 33467777777777777777766666677777777777654
No 311
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.90 E-value=6.8e-24 Score=231.48 Aligned_cols=210 Identities=20% Similarity=0.211 Sum_probs=180.2
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCc-CCC-CCchhhhCC------CCCceeeCCCCcCCcCCCc--cccCCCCCcEEE
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQ-LEG-SIPDDLCRL------AALFELDSGGNKLDGFVPA--CFGNLTNLRNLY 70 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~-l~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~ 70 (580)
+|++.+.+|.+|+++++|++|+|++|+ +++ .+|..++.+ ++|++|+|++|+++ .+|. .|+++++|++|+
T Consensus 258 ~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~ 336 (636)
T 4eco_A 258 NCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLE 336 (636)
T ss_dssp CCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEE
T ss_pred CCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEe
Confidence 588999999999999999999999998 987 789988887 99999999999999 7787 899999999999
Q ss_pred cCCCCCC-CCCCCCcCCCCCceEeCcCCcc-----cccCCCc-ccEEeCCCCcCCCCCCcccCCcc--ccceeccccccc
Q 038098 71 LGSNKLT-SIPSTLWNLKDILYLDLSSNFL-----LIGNLKV-LVQVDLSMNNFSDVIPTTIGGLK--DLQYLFLEYNRL 141 (580)
Q Consensus 71 l~~N~l~-~lp~~~~~l~~L~~L~l~~n~l-----~~~~l~~-L~~L~l~~N~l~~~~~~~~~~l~--~L~~L~l~~n~l 141 (580)
|++|+++ .+| .+..+++|++|+|++|++ .+.++++ |+.|++++|.++ .+|..+..++ +|+.|+|++|.+
T Consensus 337 L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l 414 (636)
T 4eco_A 337 CLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEI 414 (636)
T ss_dssp CCSCCCEEECC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCT
T ss_pred CcCCcCccchh-hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcC
Confidence 9999999 899 888999999999999998 3667888 999999999998 5566776654 899999999999
Q ss_pred cccCCcccc-------cccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCCCCC--------ccCcccc
Q 038098 142 QGSIPDSIG-------DLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPF--------RNFSTES 206 (580)
Q Consensus 142 ~~~~p~~~~-------~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~--------~~l~~~~ 206 (580)
++.+|..+. .+.+|+.|+|++|+++...+..+..+++|+.|++++|.++..++..... +.+..++
T Consensus 415 ~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~ 494 (636)
T 4eco_A 415 GSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSID 494 (636)
T ss_dssp TTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEE
T ss_pred CCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEE
Confidence 988888888 7789999999999999544455667899999999999999555544221 1777788
Q ss_pred CCCCccc
Q 038098 207 FEGNELL 213 (580)
Q Consensus 207 ~~~n~~~ 213 (580)
+++|...
T Consensus 495 Ls~N~l~ 501 (636)
T 4eco_A 495 LRFNKLT 501 (636)
T ss_dssp CCSSCCC
T ss_pred CcCCcCC
Confidence 8888654
No 312
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=3.1e-23 Score=201.94 Aligned_cols=184 Identities=28% Similarity=0.381 Sum_probs=165.0
Q ss_pred CccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCC
Q 038098 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPS 81 (580)
Q Consensus 2 N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~ 81 (580)
|.++. + .++..+++|++|+|++|.+++ + +.+..+++|++|+|++|.++++.+..|.++++|++|+|++|+++.++.
T Consensus 51 ~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 126 (272)
T 3rfs_A 51 SDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPD 126 (272)
T ss_dssp SCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred CCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCH
Confidence 45543 2 468899999999999999985 3 489999999999999999998888889999999999999999999876
Q ss_pred C-CcCCCCCceEeCcCCccc------ccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccc
Q 038098 82 T-LWNLKDILYLDLSSNFLL------IGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLIN 154 (580)
Q Consensus 82 ~-~~~l~~L~~L~l~~n~l~------~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 154 (580)
. +..+++|++|+|++|++. +..+++|+.|++++|.+++.++..|..+++|+.|+|++|.+++..|..+..+++
T Consensus 127 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 206 (272)
T 3rfs_A 127 GVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTS 206 (272)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred HHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcC
Confidence 5 678999999999999982 678999999999999999988888999999999999999999888888999999
Q ss_pred cccccccccccCCCccccccccCcccEEEccCCcccCCCCCC
Q 038098 155 LKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNK 196 (580)
Q Consensus 155 L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 196 (580)
|+.|+|++|.+.+. +++|+.+++..|.+++.+|..
T Consensus 207 L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 207 LQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp CCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCT
T ss_pred CCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCc
Confidence 99999999998854 457899999999999988764
No 313
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.89 E-value=2.3e-23 Score=224.52 Aligned_cols=121 Identities=21% Similarity=0.270 Sum_probs=61.9
Q ss_pred CccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCC-
Q 038098 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP- 80 (580)
Q Consensus 2 N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp- 80 (580)
|+|+++.|.+|..+++|++|+|++|.|++..|+.|.++++|++|+|++|.|+.+ |.. .+++|++|+|++|+|+.+|
T Consensus 62 N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l-p~~--~l~~L~~L~Ls~N~l~~l~~ 138 (562)
T 3a79_B 62 NSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNI-SCC--PMASLRHLDLSFNDFDVLPV 138 (562)
T ss_dssp SCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEE-CSC--CCTTCSEEECCSSCCSBCCC
T ss_pred CCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCcc-Ccc--ccccCCEEECCCCCccccCc
Confidence 455555555555555555555555555544555555555555555555555532 222 4555555555555555543
Q ss_pred -CCCcCCCCCceEeCcCCccc---ccCCCcc--cEEeCCCCcC--CCCCCccc
Q 038098 81 -STLWNLKDILYLDLSSNFLL---IGNLKVL--VQVDLSMNNF--SDVIPTTI 125 (580)
Q Consensus 81 -~~~~~l~~L~~L~l~~n~l~---~~~l~~L--~~L~l~~N~l--~~~~~~~~ 125 (580)
..+.++++|++|+|++|++. +..+++| +.|++++|.+ ++..|..+
T Consensus 139 p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l 191 (562)
T 3a79_B 139 CKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESL 191 (562)
T ss_dssp CGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSCCCCSSSCCEE
T ss_pred hHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecccccccccCcccc
Confidence 34555555555555555552 3333333 5555555555 44444433
No 314
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.89 E-value=1.8e-23 Score=227.83 Aligned_cols=194 Identities=21% Similarity=0.160 Sum_probs=177.3
Q ss_pred CCccccC--CCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCC-ccccCCCCCcEEEcCCCCCC
Q 038098 1 GNNLNGS--IPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVP-ACFGNLTNLRNLYLGSNKLT 77 (580)
Q Consensus 1 ~N~~~~~--~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~ 77 (580)
+|++++. +|..+..+++|++|+|++|.++ .+|..|..+++|++|++++|.+.+..+ ..|.++++|++|++++|+++
T Consensus 359 ~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~ 437 (606)
T 3vq2_A 359 RNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTK 437 (606)
T ss_dssp SSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCE
T ss_pred CCccCCCcchhhhhccCCcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCC
Confidence 4677766 4889999999999999999998 466899999999999999999998877 68999999999999999998
Q ss_pred C-CCCCCcCCCCCceEeCcCCccc-------ccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCccc
Q 038098 78 S-IPSTLWNLKDILYLDLSSNFLL-------IGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSI 149 (580)
Q Consensus 78 ~-lp~~~~~l~~L~~L~l~~n~l~-------~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~ 149 (580)
. .|..+..+++|++|+|++|++. +..+++|+.|++++|.+++..|..|..+++|+.|+|++|++++..|..|
T Consensus 438 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 517 (606)
T 3vq2_A 438 IDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHY 517 (606)
T ss_dssp ECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGT
T ss_pred ccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHc
Confidence 8 5667889999999999999883 6788999999999999999999999999999999999999998889999
Q ss_pred ccccccccccccccccCCCccccccccC-cccEEEccCCcccCCCCCC
Q 038098 150 GDLINLKSLNLSNNNLSGTIPISLEKLL-DLKDINVSFNKLEGEIPNK 196 (580)
Q Consensus 150 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~-~L~~l~l~~N~l~~~~~~~ 196 (580)
..+++|+.|+|++|+++ .+|..+..++ +|+.|++++|++.|.++..
T Consensus 518 ~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 518 NQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQ 564 (606)
T ss_dssp TTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTH
T ss_pred cCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccH
Confidence 99999999999999999 6777788887 5999999999999988754
No 315
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.89 E-value=1.5e-23 Score=226.73 Aligned_cols=214 Identities=22% Similarity=0.230 Sum_probs=178.6
Q ss_pred CccccCCCcccCCCCCCCEEeccCCcCCCCCchhh-------------------hCCCCCceeeCCCCcCCcCC--Cccc
Q 038098 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDL-------------------CRLAALFELDSGGNKLDGFV--PACF 60 (580)
Q Consensus 2 N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~-------------------~~l~~L~~L~L~~N~l~~~~--~~~~ 60 (580)
|+++ .+|..+..+ +|++|++++|.+.......+ ..+++|++|++++|.+++.. +..+
T Consensus 292 ~~l~-~l~~~~~~~-~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 369 (570)
T 2z63_A 292 VTIE-RVKDFSYNF-GWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSD 369 (570)
T ss_dssp CEEC-SCCBCCSCC-CCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEEEEEHHH
T ss_pred ccch-hhhhhhccC-CccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCccCccccccccc
Confidence 3444 455555555 56666665555552221111 56788999999999988654 6778
Q ss_pred cCCCCCcEEEcCCCCCCCCCCCCcCCCCCceEeCcCCcc-------cccCCCcccEEeCCCCcCCCCCCcccCCccccce
Q 038098 61 GNLTNLRNLYLGSNKLTSIPSTLWNLKDILYLDLSSNFL-------LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQY 133 (580)
Q Consensus 61 ~~l~~L~~L~l~~N~l~~lp~~~~~l~~L~~L~l~~n~l-------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 133 (580)
.++++|++|++++|+++.+|..+..+++|++|++++|.+ .+.++++|+.|++++|.+++..+..|..+++|+.
T Consensus 370 ~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 449 (570)
T 2z63_A 370 FGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 449 (570)
T ss_dssp HTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCE
T ss_pred cccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcE
Confidence 899999999999999999887788899999999999987 2567899999999999999888999999999999
Q ss_pred ecccccccc-ccCCcccccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCC-CCCccCccccCCCCc
Q 038098 134 LFLEYNRLQ-GSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNK-GPFRNFSTESFEGNE 211 (580)
Q Consensus 134 L~l~~n~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~~~~~~n~ 211 (580)
|+|++|.++ +.+|..+..+++|+.|+|++|++++..|..+..+++|+.|++++|++++.++.. ..+++++.+++.+|+
T Consensus 450 L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 529 (570)
T 2z63_A 450 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNP 529 (570)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCc
Confidence 999999997 578999999999999999999999888999999999999999999999988764 678889999999999
Q ss_pred cccCCC
Q 038098 212 LLCGMP 217 (580)
Q Consensus 212 ~~c~~p 217 (580)
+.|+.|
T Consensus 530 ~~~~~~ 535 (570)
T 2z63_A 530 WDCSCP 535 (570)
T ss_dssp BCCCTT
T ss_pred ccCCCc
Confidence 999866
No 316
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.89 E-value=4.6e-24 Score=208.11 Aligned_cols=150 Identities=15% Similarity=0.126 Sum_probs=119.7
Q ss_pred HHHHhcCCCcCceeccccCceEEEEEeCCCCEEEEEEEecccc------------------chhhhHHHHHHHHhhcCCC
Q 038098 287 IFQATNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYG------------------RAFKSFDIECDMIKRIRHR 348 (580)
Q Consensus 287 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~l~h~ 348 (580)
+......|...+.||+|+||.||+|...+|+.||+|++..... .....+.+|++++++++
T Consensus 85 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-- 162 (282)
T 1zar_A 85 LVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-- 162 (282)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--
T ss_pred HHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--
Confidence 3344455667799999999999999987799999999854321 12456889999999999
Q ss_pred CcceEEeeeecCCceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCC
Q 038098 349 NIIKIISSCSSDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN 428 (580)
Q Consensus 349 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~ 428 (580)
| +++.+++.. +..++||||++||+|.+ +.. .....++.|++.|+.||| +.+|+||||||+|||++ +
T Consensus 163 ~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~-~ 228 (282)
T 1zar_A 163 G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS-E 228 (282)
T ss_dssp T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-T
T ss_pred C-CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-C
Confidence 4 566665543 55699999999999998 421 224479999999999999 99999999999999999 9
Q ss_pred CcEEEccccCccccCCCCCcccccccccCCCcCCccccc
Q 038098 429 MVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGR 467 (580)
Q Consensus 429 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 467 (580)
+.+||+|||+|+. +..|+|||++.
T Consensus 229 ~~vkl~DFG~a~~---------------~~~~~a~e~l~ 252 (282)
T 1zar_A 229 EGIWIIDFPQSVE---------------VGEEGWREILE 252 (282)
T ss_dssp TEEEECCCTTCEE---------------TTSTTHHHHHH
T ss_pred CcEEEEECCCCeE---------------CCCCCHHHHHH
Confidence 9999999999973 23478899774
No 317
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.89 E-value=3.8e-23 Score=233.12 Aligned_cols=98 Identities=29% Similarity=0.282 Sum_probs=47.4
Q ss_pred CccccCCCcccCCCCCCCEEeccCCcCCCC-CchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCC-C
Q 038098 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGS-IPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTS-I 79 (580)
Q Consensus 2 N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-l 79 (580)
|+|+++.|.+|.++++|++|+|++|.+.+. .|+.|.++++|++|+|++|.|+++.|..|.++++|++|+|++|+++. +
T Consensus 34 N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 113 (844)
T 3j0a_A 34 NYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAV 113 (844)
T ss_dssp CCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCC
T ss_pred CcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCccc
Confidence 555555555555555555555555533222 24445555555555555555554445555555555555555555443 2
Q ss_pred CCC--CcCCCCCceEeCcCCcc
Q 038098 80 PST--LWNLKDILYLDLSSNFL 99 (580)
Q Consensus 80 p~~--~~~l~~L~~L~l~~n~l 99 (580)
|.. +.++++|++|+|++|.+
T Consensus 114 ~~~~~~~~L~~L~~L~Ls~N~l 135 (844)
T 3j0a_A 114 LKDGYFRNLKALTRLDLSKNQI 135 (844)
T ss_dssp STTCCCSSCSSCCEEEEESCCC
T ss_pred ccCccccccCCCCEEECCCCcc
Confidence 222 34444444444444443
No 318
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.9e-23 Score=207.53 Aligned_cols=186 Identities=18% Similarity=0.176 Sum_probs=159.5
Q ss_pred CCccccCCCccc--CCCCCCCEEeccCCcCCCCCc----hhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCC
Q 038098 1 GNNLNGSIPIAV--GKLQKLQLLSLEDNQLEGSIP----DDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSN 74 (580)
Q Consensus 1 ~N~~~~~~p~~~--~~l~~L~~L~L~~n~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 74 (580)
+|++++..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|.+++..+..|+.+++|++|+|++|
T Consensus 100 ~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 179 (310)
T 4glp_A 100 DLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDN 179 (310)
T ss_dssp SCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSC
T ss_pred CCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCC
Confidence 588999999988 899999999999999986555 45567899999999999999888899999999999999999
Q ss_pred CCCC---CCC--CCcCCCCCceEeCcCCccc---------ccCCCcccEEeCCCCcCCCCCCcccCCc---cccceeccc
Q 038098 75 KLTS---IPS--TLWNLKDILYLDLSSNFLL---------IGNLKVLVQVDLSMNNFSDVIPTTIGGL---KDLQYLFLE 137 (580)
Q Consensus 75 ~l~~---lp~--~~~~l~~L~~L~l~~n~l~---------~~~l~~L~~L~l~~N~l~~~~~~~~~~l---~~L~~L~l~ 137 (580)
++.. ++. .+..+++|++|+|++|++. +.++++|++|+|++|.+++..|..+..+ ++|+.|+|+
T Consensus 180 ~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls 259 (310)
T 4glp_A 180 PGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLS 259 (310)
T ss_dssp TTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECC
T ss_pred CCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECC
Confidence 9865 433 3467899999999999983 3577999999999999998877777766 699999999
Q ss_pred cccccccCCcccccccccccccccccccCCCccccccccCcccEEEccCCcccC
Q 038098 138 YNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEG 191 (580)
Q Consensus 138 ~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 191 (580)
+|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|++++|+++.
T Consensus 260 ~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 260 FAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp SSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 99999 7787764 7999999999999954 43 6788999999999999874
No 319
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=1.1e-22 Score=201.72 Aligned_cols=181 Identities=25% Similarity=0.367 Sum_probs=159.9
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP 80 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp 80 (580)
+|+++. +| ++..+++|++|+|++|.++.. +. +..+++|++|+|++|.+++. ..+..+++|++|+|++|+|+.++
T Consensus 50 ~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~~ 123 (308)
T 1h6u_A 50 GTGVTT-IE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITDVT 123 (308)
T ss_dssp TSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCCCG
T ss_pred CCCccC-ch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCCch
Confidence 466664 44 689999999999999999954 44 99999999999999999964 47999999999999999999987
Q ss_pred CCCcCCCCCceEeCcCCccc----ccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccc
Q 038098 81 STLWNLKDILYLDLSSNFLL----IGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLK 156 (580)
Q Consensus 81 ~~~~~l~~L~~L~l~~n~l~----~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 156 (580)
. +..+++|++|+|++|++. +..+++|+.|++++|.+++..+ +..+++|+.|+|++|.+++. +. +..+++|+
T Consensus 124 ~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~ 198 (308)
T 1h6u_A 124 P-LAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDI-SP-LASLPNLI 198 (308)
T ss_dssp G-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-GG-GGGCTTCC
T ss_pred h-hcCCCCCCEEECCCCccCcCccccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcC-hh-hcCCCCCC
Confidence 5 889999999999999983 6789999999999999997654 89999999999999999954 43 88999999
Q ss_pred cccccccccCCCccccccccCcccEEEccCCcccCCCC
Q 038098 157 SLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIP 194 (580)
Q Consensus 157 ~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 194 (580)
.|+|++|++++..+ +..+++|+.|++++|++++.+.
T Consensus 199 ~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~~~ 234 (308)
T 1h6u_A 199 EVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQPV 234 (308)
T ss_dssp EEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECCCE
T ss_pred EEEccCCccCcccc--ccCCCCCCEEEccCCeeecCCe
Confidence 99999999996553 8899999999999999988554
No 320
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.89 E-value=1.6e-23 Score=223.82 Aligned_cols=123 Identities=22% Similarity=0.206 Sum_probs=68.6
Q ss_pred CccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCC--C
Q 038098 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTS--I 79 (580)
Q Consensus 2 N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~--l 79 (580)
|+|+++.|.+|.++++|++|+|++|+|++..|+.|+++++|++|+|++|+|+. +|.. .+++|++|+|++|+|+. +
T Consensus 31 n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~~L~~L~L~~N~l~~~~~ 107 (520)
T 2z7x_B 31 NYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-ISCH--PTVNLKHLDLSFNAFDALPI 107 (520)
T ss_dssp SCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE-EECC--CCCCCSEEECCSSCCSSCCC
T ss_pred CcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceee-cCcc--ccCCccEEeccCCccccccc
Confidence 55555555556666666666666666655555556666666666666666553 2322 55566666666666654 3
Q ss_pred CCCCcCCCCCceEeCcCCcc---cccCCCcc--cEEeCCCCcC--CCCCCcccCC
Q 038098 80 PSTLWNLKDILYLDLSSNFL---LIGNLKVL--VQVDLSMNNF--SDVIPTTIGG 127 (580)
Q Consensus 80 p~~~~~l~~L~~L~l~~n~l---~~~~l~~L--~~L~l~~N~l--~~~~~~~~~~ 127 (580)
|..+.++++|++|+|++|++ .+..+++| +.|++++|.+ .+..|..+..
T Consensus 108 p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~ 162 (520)
T 2z7x_B 108 CKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQD 162 (520)
T ss_dssp CGGGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTT
T ss_pred hhhhccCCcceEEEecCcccchhhccccccceeeEEEeecccccccccccccccc
Confidence 44555666666666666655 24445555 6666666665 4444444433
No 321
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=2.3e-22 Score=193.30 Aligned_cols=164 Identities=26% Similarity=0.323 Sum_probs=149.9
Q ss_pred CccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCC
Q 038098 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPS 81 (580)
Q Consensus 2 N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~ 81 (580)
|+++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|.|+++.+..|.++++|++|+|++|+|+.+|.
T Consensus 24 ~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 100 (251)
T 3m19_A 24 KSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPL 100 (251)
T ss_dssp CCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred CCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccCh
Confidence 4555 5666665 689999999999998888999999999999999999999989999999999999999999999885
Q ss_pred -CCcCCCCCceEeCcCCccc------ccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccc
Q 038098 82 -TLWNLKDILYLDLSSNFLL------IGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLIN 154 (580)
Q Consensus 82 -~~~~l~~L~~L~l~~n~l~------~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 154 (580)
.+..+++|++|+|++|+|. +..+++|+.|+|++|.++++++..|..+++|+.|+|++|.+++..+..|..+++
T Consensus 101 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 180 (251)
T 3m19_A 101 GVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGK 180 (251)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred hHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCC
Confidence 5678999999999999992 678999999999999999988889999999999999999999777778999999
Q ss_pred cccccccccccCCC
Q 038098 155 LKSLNLSNNNLSGT 168 (580)
Q Consensus 155 L~~L~l~~N~l~~~ 168 (580)
|+.|+|++|++++.
T Consensus 181 L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 181 LQTITLFGNQFDCS 194 (251)
T ss_dssp CCEEECCSCCBCTT
T ss_pred CCEEEeeCCceeCC
Confidence 99999999999965
No 322
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.88 E-value=4.5e-23 Score=221.81 Aligned_cols=126 Identities=20% Similarity=0.234 Sum_probs=101.5
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCC-
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSI- 79 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~l- 79 (580)
+|+|+++.|.+|.++++|++|+|++|++++..|+.|..+++|++|+|++|.+++..+..|+++++|++|+|++|+++.+
T Consensus 35 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 114 (549)
T 2z81_A 35 FNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLG 114 (549)
T ss_dssp SSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSC
T ss_pred CCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccc
Confidence 5788888888899999999999999999888888899999999999999999887777789999999999999998854
Q ss_pred -CCCCcCCCCCceEeCcCCcc-------cccCCCcccEEeCCCCcCCCCCCcccC
Q 038098 80 -PSTLWNLKDILYLDLSSNFL-------LIGNLKVLVQVDLSMNNFSDVIPTTIG 126 (580)
Q Consensus 80 -p~~~~~l~~L~~L~l~~n~l-------~~~~l~~L~~L~l~~N~l~~~~~~~~~ 126 (580)
|..+.++++|++|++++|.+ .+.++++|++|++++|.+++..|..+.
T Consensus 115 ~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 169 (549)
T 2z81_A 115 VTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLK 169 (549)
T ss_dssp SSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTT
T ss_pred hhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhh
Confidence 56777888888888888873 355666777777777776665554443
No 323
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.88 E-value=2.9e-22 Score=202.48 Aligned_cols=202 Identities=24% Similarity=0.363 Sum_probs=104.8
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP 80 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp 80 (580)
+|++++..+ +..+++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|++|++++|+++.++
T Consensus 119 ~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~ 193 (347)
T 4fmz_A 119 EDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDIS 193 (347)
T ss_dssp TSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCG
T ss_pred CCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccccc
Confidence 355554433 6677777777777775443333 36666666666666666664332 666666666666666666654
Q ss_pred CCCcCCCCCceEeCcCCccc----ccCCCcccEEeCCCCcCCCCCC--------------------cccCCccccceecc
Q 038098 81 STLWNLKDILYLDLSSNFLL----IGNLKVLVQVDLSMNNFSDVIP--------------------TTIGGLKDLQYLFL 136 (580)
Q Consensus 81 ~~~~~l~~L~~L~l~~n~l~----~~~l~~L~~L~l~~N~l~~~~~--------------------~~~~~l~~L~~L~l 136 (580)
. +..+++|+.|++++|.+. +..+++|+.|++++|.+++..+ ..+..+++|+.|++
T Consensus 194 ~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l 272 (347)
T 4fmz_A 194 P-LASLTSLHYFTAYVNQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNV 272 (347)
T ss_dssp G-GGGCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEEC
T ss_pred c-ccCCCccceeecccCCCCCCchhhcCCcCCEEEccCCccCCCcchhcCCCCCEEECCCCccCCChhHhcCCCcCEEEc
Confidence 4 444555555555555441 3344444555555554443322 23444445555555
Q ss_pred ccccccccCCcccccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCCCc
Q 038098 137 EYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNE 211 (580)
Q Consensus 137 ~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~ 211 (580)
++|.+++ + ..+..+++|+.|++++|++++..|..+..+++|+.|++++|++++.+| ...++.+..+++.+|+
T Consensus 273 ~~n~l~~-~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 273 GSNQISD-I-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP-LASLSKMDSADFANQV 344 (347)
T ss_dssp CSSCCCC-C-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG-GGGCTTCSEESSSCC-
T ss_pred cCCccCC-C-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC-hhhhhccceeehhhhc
Confidence 5554442 2 224444555555555555554444445555555555555555554444 3344444444444443
No 324
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.88 E-value=1.2e-22 Score=219.59 Aligned_cols=160 Identities=24% Similarity=0.303 Sum_probs=76.0
Q ss_pred CccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCC
Q 038098 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPS 81 (580)
Q Consensus 2 N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~ 81 (580)
|+|+++.+.+|.++++|++|+|++|.+++..|+.|.++++|++|+|++|.++++.|..|.++++|++|+|++|+++.++.
T Consensus 38 n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~ 117 (570)
T 2z63_A 38 NPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLEN 117 (570)
T ss_dssp CCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTT
T ss_pred CccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCC
Confidence 44444444455555555555555555544444445555555555555555554444455555555555555555554443
Q ss_pred -CCcCCCCCceEeCcCCccc-------ccCCCcccEEeCCCCcCCCCCCcccCCcccc----ceeccccccccccCCccc
Q 038098 82 -TLWNLKDILYLDLSSNFLL-------IGNLKVLVQVDLSMNNFSDVIPTTIGGLKDL----QYLFLEYNRLQGSIPDSI 149 (580)
Q Consensus 82 -~~~~l~~L~~L~l~~n~l~-------~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L----~~L~l~~n~l~~~~p~~~ 149 (580)
.+.++++|++|+|++|.+. +.++++|++|++++|.+++..+..+..+++| ..|++++|.+++..|..|
T Consensus 118 ~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~ 197 (570)
T 2z63_A 118 FPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF 197 (570)
T ss_dssp CSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTT
T ss_pred ccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHh
Confidence 3444555555555555431 3334455555555555544444444444444 444555554443333333
Q ss_pred ccccccccccccc
Q 038098 150 GDLINLKSLNLSN 162 (580)
Q Consensus 150 ~~l~~L~~L~l~~ 162 (580)
..+ +|+.|++++
T Consensus 198 ~~~-~L~~L~l~~ 209 (570)
T 2z63_A 198 KEI-RLHKLTLRN 209 (570)
T ss_dssp TTC-EEEEEEEES
T ss_pred ccC-cceeEeccc
Confidence 322 344444433
No 325
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.88 E-value=9e-23 Score=219.48 Aligned_cols=208 Identities=22% Similarity=0.248 Sum_probs=177.3
Q ss_pred CccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCC
Q 038098 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPS 81 (580)
Q Consensus 2 N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~ 81 (580)
|+++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|+++++.|..|.++++|++|+|++|+++.++.
T Consensus 15 ~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 91 (549)
T 2z81_A 15 RSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSS 91 (549)
T ss_dssp SCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCH
T ss_pred Cccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCH
Confidence 5565 5676654 799999999999998889999999999999999999999999999999999999999999999886
Q ss_pred C-CcCCCCCceEeCcCCccc-------ccCCCcccEEeCCCCc-CCCCCCcccCCccccceeccccccccccCCcccccc
Q 038098 82 T-LWNLKDILYLDLSSNFLL-------IGNLKVLVQVDLSMNN-FSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDL 152 (580)
Q Consensus 82 ~-~~~l~~L~~L~l~~n~l~-------~~~l~~L~~L~l~~N~-l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 152 (580)
. +.++++|++|+|++|++. +.++++|+.|++++|. +..+++..|..+++|+.|++++|.+++..|..+..+
T Consensus 92 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l 171 (549)
T 2z81_A 92 SWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSI 171 (549)
T ss_dssp HHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTC
T ss_pred HHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhcc
Confidence 5 889999999999999883 6678999999999998 555556789999999999999999998899999999
Q ss_pred cccccccccccccCCCccccccccCcccEEEccCCcccCCC----CCCCCCccCccccCCCCcc
Q 038098 153 INLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEI----PNKGPFRNFSTESFEGNEL 212 (580)
Q Consensus 153 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~----~~~~~~~~l~~~~~~~n~~ 212 (580)
++|+.|++++|.+....+..+..+++|+.|++++|++++.. +.....+.++.+++.+|..
T Consensus 172 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l 235 (549)
T 2z81_A 172 RDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVL 235 (549)
T ss_dssp SEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEE
T ss_pred ccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceecccccc
Confidence 99999999999998444334467899999999999999853 2223345566666665543
No 326
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.87 E-value=3.7e-22 Score=196.03 Aligned_cols=171 Identities=27% Similarity=0.383 Sum_probs=151.4
Q ss_pred cCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCCcCCCCCce
Q 038098 12 VGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTLWNLKDILY 91 (580)
Q Consensus 12 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~~~l~~L~~ 91 (580)
+..+++|+.|++++|.++.. + .+..+++|++|+|++|+++++.+ +.++++|++|+|++|+++.+|. +..+++|++
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~ 116 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLSS-LKDLKKLKS 116 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCGGG-GTTCTTCCE
T ss_pred hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCChh-hccCCCCCE
Confidence 55789999999999999844 4 48999999999999999997654 9999999999999999999875 888999999
Q ss_pred EeCcCCcc----cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccccccccccccCC
Q 038098 92 LDLSSNFL----LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSG 167 (580)
Q Consensus 92 L~l~~n~l----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 167 (580)
|+|++|++ .+..+++|+.|++++|.++++ ..+..+++|+.|+|++|.+++..| +..+++|+.|+|++|.+++
T Consensus 117 L~L~~n~i~~~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 117 LSLEHNGISDINGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp EECTTSCCCCCGGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred EECCCCcCCCChhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC
Confidence 99999998 367889999999999999976 678899999999999999996544 8899999999999999995
Q ss_pred CccccccccCcccEEEccCCcccCCC
Q 038098 168 TIPISLEKLLDLKDINVSFNKLEGEI 193 (580)
Q Consensus 168 ~~~~~~~~l~~L~~l~l~~N~l~~~~ 193 (580)
++ .+..+++|+.|++++|+++..+
T Consensus 193 -l~-~l~~l~~L~~L~l~~n~i~~~~ 216 (291)
T 1h6t_A 193 -LR-ALAGLKNLDVLELFSQECLNKP 216 (291)
T ss_dssp -CG-GGTTCTTCSEEEEEEEEEECCC
T ss_pred -Ch-hhccCCCCCEEECcCCcccCCc
Confidence 44 4889999999999999998754
No 327
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.87 E-value=2.5e-21 Score=202.33 Aligned_cols=192 Identities=22% Similarity=0.250 Sum_probs=114.6
Q ss_pred CccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCC
Q 038098 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPS 81 (580)
Q Consensus 2 N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~ 81 (580)
|+|+++ | +|..+++|++|+|++|.|++. | ++.+++|++|+|++|.|+++ + ++++++|++|+|++|+|+.+|
T Consensus 52 n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~l~- 122 (457)
T 3bz5_A 52 SSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTKLD- 122 (457)
T ss_dssp SCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSCCC-
T ss_pred CCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCeec-
Confidence 455543 3 455666666666666666542 2 55566666666666666643 2 556666666666666666654
Q ss_pred CCcCCCCCceEeCcCCcc---cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccccc
Q 038098 82 TLWNLKDILYLDLSSNFL---LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSL 158 (580)
Q Consensus 82 ~~~~l~~L~~L~l~~n~l---~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 158 (580)
+..+++|++|++++|++ .+..+++|+.|++++|...+.. .+..+++|+.|++++|.+++ +| +..+++|+.|
T Consensus 123 -~~~l~~L~~L~l~~N~l~~l~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L 196 (457)
T 3bz5_A 123 -VSQNPLLTYLNCARNTLTEIDVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRL 196 (457)
T ss_dssp -CTTCTTCCEEECTTSCCSCCCCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEE
T ss_pred -CCCCCcCCEEECCCCccceeccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEE
Confidence 55566666666666655 2445556666666666433322 35566667777777777664 34 5666677777
Q ss_pred cccccccCCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCCCccc
Q 038098 159 NLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNELL 213 (580)
Q Consensus 159 ~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~ 213 (580)
++++|++++. .+..+++|+.|++++|++++.+ ...++.+..+++.+|...
T Consensus 197 ~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ip--~~~l~~L~~L~l~~N~l~ 246 (457)
T 3bz5_A 197 NCDTNNITKL---DLNQNIQLTFLDCSSNKLTEID--VTPLTQLTYFDCSVNPLT 246 (457)
T ss_dssp ECCSSCCSCC---CCTTCTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCS
T ss_pred ECcCCcCCee---ccccCCCCCEEECcCCcccccC--ccccCCCCEEEeeCCcCC
Confidence 7777777643 2666677777777777777643 445666666666666543
No 328
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.87 E-value=1.4e-21 Score=205.58 Aligned_cols=193 Identities=27% Similarity=0.436 Sum_probs=99.3
Q ss_pred cCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCCcCCCCCce
Q 038098 12 VGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTLWNLKDILY 91 (580)
Q Consensus 12 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~~~l~~L~~ 91 (580)
+.++++|++|++++|.++.. +.+..+++|++|++++|.+++..+ ++.+++|++|++++|+++.++ .+..+++|++
T Consensus 173 ~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~ 247 (466)
T 1o6v_A 173 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIG-TLASLTNLTD 247 (466)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCG-GGGGCTTCSE
T ss_pred hccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccch-hhhcCCCCCE
Confidence 66666666666666666532 235666666666666666664433 455555555555555555543 3444555555
Q ss_pred EeCcCCcc----cccCCCcccEEeCCCCcCCCCCC--------------------cccCCccccceeccccccccccCCc
Q 038098 92 LDLSSNFL----LIGNLKVLVQVDLSMNNFSDVIP--------------------TTIGGLKDLQYLFLEYNRLQGSIPD 147 (580)
Q Consensus 92 L~l~~n~l----~~~~l~~L~~L~l~~N~l~~~~~--------------------~~~~~l~~L~~L~l~~n~l~~~~p~ 147 (580)
|++++|.+ .+..+++|+.|++++|.+++..+ ..+..+++|+.|+|++|.+++..|
T Consensus 248 L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~- 326 (466)
T 1o6v_A 248 LDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP- 326 (466)
T ss_dssp EECCSSCCCCCGGGTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG-
T ss_pred EECCCCccccchhhhcCCCCCEEECCCCccCccccccCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCchh-
Confidence 55555554 13444455555555555544322 013444444555555554443322
Q ss_pred ccccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCCCcccc
Q 038098 148 SIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNELLC 214 (580)
Q Consensus 148 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~c 214 (580)
+..+++|+.|++++|++++. ..+..+++|+.|++++|++++.+| ...++.+..+++.+|++..
T Consensus 327 -~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 327 -VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP-LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp -GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG-GTTCTTCCEEECCCEEEEC
T ss_pred -hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch-hhcCCCCCEEeccCCcccC
Confidence 34445555555555555432 234455555555555555555544 3444555555555555443
No 329
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.86 E-value=8.7e-22 Score=185.00 Aligned_cols=155 Identities=22% Similarity=0.353 Sum_probs=126.8
Q ss_pred CEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCC-CCCCcCCCCCceEeCcCC
Q 038098 19 QLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSI-PSTLWNLKDILYLDLSSN 97 (580)
Q Consensus 19 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~l-p~~~~~l~~L~~L~l~~n 97 (580)
+.+++++|.++ .+|..+. ++|++|+|++|+|+++.+..|..+++|++|+|++|+|+.+ |..+.++++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L-------- 82 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSL-------- 82 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSC--------
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCC--------
Confidence 67899999998 5666554 6899999999999988888899999999999999999887 4566555555
Q ss_pred cccccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccccccccccccCCCccccccccC
Q 038098 98 FLLIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKLL 177 (580)
Q Consensus 98 ~l~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 177 (580)
+.|+|++|.|+.+++..|..+++|+.|+|++|.|++..|..|..+++|+.|+|++|+|++..+..+..++
T Consensus 83 ----------~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 152 (220)
T 2v9t_B 83 ----------NSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR 152 (220)
T ss_dssp ----------CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCT
T ss_pred ----------CEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCC
Confidence 5555666666666677788888899999999998877788888888999999999999877777788888
Q ss_pred cccEEEccCCcccCCCC
Q 038098 178 DLKDINVSFNKLEGEIP 194 (580)
Q Consensus 178 ~L~~l~l~~N~l~~~~~ 194 (580)
+|+.|++++|++.|.+.
T Consensus 153 ~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 153 AIQTMHLAQNPFICDCH 169 (220)
T ss_dssp TCCEEECCSSCEECSGG
T ss_pred CCCEEEeCCCCcCCCCc
Confidence 99999999999988764
No 330
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.86 E-value=5.6e-21 Score=193.00 Aligned_cols=198 Identities=27% Similarity=0.449 Sum_probs=140.9
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP 80 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp 80 (580)
+|++..+ | +|..+++|++|+|++|.++. ++. +..+++|++|+|++|.++.+ +.|.++++|++|+|++|+++.++
T Consensus 53 ~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~l~~n~i~~~~ 126 (347)
T 4fmz_A 53 GEKVASI-Q-GIEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYLNEDNISDIS 126 (347)
T ss_dssp SSCCCCC-T-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEECTTSCCCCCG
T ss_pred CCccccc-h-hhhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEECcCCcccCch
Confidence 3555543 3 48888899999999998884 343 88888999999999988854 36888899999999999888887
Q ss_pred CCCcCCCCCceEeCcCCcc-----cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCccccccccc
Q 038098 81 STLWNLKDILYLDLSSNFL-----LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINL 155 (580)
Q Consensus 81 ~~~~~l~~L~~L~l~~n~l-----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 155 (580)
. +..+++|++|++++|.. .+..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+++ ++. +..+++|
T Consensus 127 ~-~~~l~~L~~L~l~~n~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L 201 (347)
T 4fmz_A 127 P-LANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED-ISP-LASLTSL 201 (347)
T ss_dssp G-GTTCTTCCEEECTTCTTCCCCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC-CGG-GGGCTTC
T ss_pred h-hccCCceeEEECCCCCCcccccchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc-ccc-ccCCCcc
Confidence 6 77788888888888854 35667777777777777775543 6677777777777777763 333 6666667
Q ss_pred ccccccccccCCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCCCcc
Q 038098 156 KSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNEL 212 (580)
Q Consensus 156 ~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~ 212 (580)
+.|++++|.+++..+ +..+++|+.|++++|.++...+ ...+++++.+++.+|..
T Consensus 202 ~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l 255 (347)
T 4fmz_A 202 HYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQI 255 (347)
T ss_dssp CEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCC
T ss_pred ceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCcc
Confidence 777777776664433 5666666677777666666554 44555666666665543
No 331
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.86 E-value=8.4e-22 Score=185.10 Aligned_cols=157 Identities=22% Similarity=0.302 Sum_probs=131.6
Q ss_pred CCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCC-ccccCCCCCcEEEcCCCCCCCCCC-CCcCCCCCceEeCc
Q 038098 18 LQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVP-ACFGNLTNLRNLYLGSNKLTSIPS-TLWNLKDILYLDLS 95 (580)
Q Consensus 18 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~lp~-~~~~l~~L~~L~l~ 95 (580)
-+++++++|.++ .+|..+. +.+++|+|++|+|+++.+ ..|..+++|++|+|++|+|+.++. .+.++
T Consensus 13 ~~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l--------- 80 (220)
T 2v70_A 13 GTTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA--------- 80 (220)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTC---------
T ss_pred CCEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCC---------
Confidence 368999999998 4666554 357899999999997754 468899999999999999998765 45444
Q ss_pred CCcccccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccccccccccccCCCccccccc
Q 038098 96 SNFLLIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEK 175 (580)
Q Consensus 96 ~n~l~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 175 (580)
++|+.|+|++|.++++++..|..+++|+.|+|++|.|++..|..|..+++|+.|+|++|++++..|..|..
T Consensus 81 ---------~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 151 (220)
T 2v70_A 81 ---------SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDT 151 (220)
T ss_dssp ---------TTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTT
T ss_pred ---------CCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcC
Confidence 45577777777777888888999999999999999999888889999999999999999999888999999
Q ss_pred cCcccEEEccCCcccCCCCC
Q 038098 176 LLDLKDINVSFNKLEGEIPN 195 (580)
Q Consensus 176 l~~L~~l~l~~N~l~~~~~~ 195 (580)
+++|+.|++++|+++|.++.
T Consensus 152 l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 152 LHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp CTTCCEEECCSCCEECSGGG
T ss_pred CCCCCEEEecCcCCcCCCch
Confidence 99999999999999988763
No 332
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=5.9e-21 Score=177.92 Aligned_cols=156 Identities=26% Similarity=0.340 Sum_probs=92.0
Q ss_pred CCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCCcCCCCCceEeCc
Q 038098 16 QKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTLWNLKDILYLDLS 95 (580)
Q Consensus 16 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~~~l~~L~~L~l~ 95 (580)
++|++|+|++|.+++..+..|..+++|++|+|++|+++++.+..|..+++|++|+|++|+|+.+|...
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~------------ 95 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGV------------ 95 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT------------
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhH------------
Confidence 34555555555555444444445555555555555555444444455555555555555555444321
Q ss_pred CCcccccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccccccccccccCCCccccccc
Q 038098 96 SNFLLIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEK 175 (580)
Q Consensus 96 ~n~l~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 175 (580)
+.++++|+.|++++|.++++++..|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|.+.+ .
T Consensus 96 -----~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~ 163 (208)
T 2o6s_A 96 -----FDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------T 163 (208)
T ss_dssp -----TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------C
T ss_pred -----hcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------C
Confidence 3455566666666666666666666777777777777777775555556677777777777776653 2
Q ss_pred cCcccEEEccCCcccCCCCC
Q 038098 176 LLDLKDINVSFNKLEGEIPN 195 (580)
Q Consensus 176 l~~L~~l~l~~N~l~~~~~~ 195 (580)
+++|+.|+++.|.+++.+|.
T Consensus 164 ~~~l~~L~~~~n~~~g~ip~ 183 (208)
T 2o6s_A 164 CPGIRYLSEWINKHSGVVRN 183 (208)
T ss_dssp TTTTHHHHHHHHHCTTTBBC
T ss_pred CCCHHHHHHHHHhCCceeec
Confidence 34667777777777776664
No 333
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.85 E-value=1.3e-20 Score=196.86 Aligned_cols=186 Identities=23% Similarity=0.223 Sum_probs=161.3
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP 80 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp 80 (580)
+|+|+++ | |+.+++|++|+|++|.|++. | ++.+++|++|+|++|+++++ + ++.+++|++|++++|+|+.++
T Consensus 73 ~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l~ 143 (457)
T 3bz5_A 73 SNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEID 143 (457)
T ss_dssp SSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCCC
T ss_pred CCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCccceec
Confidence 5788875 4 99999999999999999964 4 89999999999999999975 3 999999999999999999985
Q ss_pred CCCcCCCCCceEeCcCCcc----cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccc
Q 038098 81 STLWNLKDILYLDLSSNFL----LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLK 156 (580)
Q Consensus 81 ~~~~~l~~L~~L~l~~n~l----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 156 (580)
+..+++|++|++++|.. .+..+++|+.|++++|+++++ | +..+++|+.|++++|.+++. .+..+++|+
T Consensus 144 --l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~ 215 (457)
T 3bz5_A 144 --VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLT 215 (457)
T ss_dssp --CTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCS
T ss_pred --cccCCcCCEEECCCCCcccccccccCCcCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCC
Confidence 78899999999999953 477899999999999999985 3 88899999999999999954 388899999
Q ss_pred cccccccccCCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCC
Q 038098 157 SLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFE 208 (580)
Q Consensus 157 ~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~ 208 (580)
.|++++|++++ +| +..+++|+.|++++|++++.++. .++.+..+.+.
T Consensus 216 ~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~--~l~~L~~L~l~ 262 (457)
T 3bz5_A 216 FLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVS--TLSKLTTLHCI 262 (457)
T ss_dssp EEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCT--TCTTCCEEECT
T ss_pred EEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHH--HCCCCCEEecc
Confidence 99999999997 55 88999999999999999997643 34555444333
No 334
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.85 E-value=5.4e-21 Score=201.09 Aligned_cols=198 Identities=29% Similarity=0.422 Sum_probs=168.6
Q ss_pred CccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCC
Q 038098 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPS 81 (580)
Q Consensus 2 N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~ 81 (580)
|++++. | .+..+++|+.|+++ |.+... + .+.++++|++|++++|.++.. ..+..+++|++|++++|+++.++.
T Consensus 144 n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~-~-~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~ 216 (466)
T 1o6v_A 144 NTISDI-S-ALSGLTSLQQLSFG-NQVTDL-K-PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP 216 (466)
T ss_dssp EEECCC-G-GGTTCTTCSEEEEE-ESCCCC-G-GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CccCCC-h-hhccCCcccEeecC-CcccCc-h-hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc
Confidence 566653 3 59999999999997 566533 3 399999999999999999865 458999999999999999999865
Q ss_pred CCcCCCCCceEeCcCCcc----cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCccccccccccc
Q 038098 82 TLWNLKDILYLDLSSNFL----LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKS 157 (580)
Q Consensus 82 ~~~~l~~L~~L~l~~n~l----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 157 (580)
+..+++|+.|++++|++ .+..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.
T Consensus 217 -~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 291 (466)
T 1o6v_A 217 -LGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTN 291 (466)
T ss_dssp -GGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSE
T ss_pred -ccccCCCCEEECCCCCcccchhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCe
Confidence 77899999999999998 46789999999999999998755 8899999999999999995443 888999999
Q ss_pred ccccccccCCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCCCcccc
Q 038098 158 LNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNELLC 214 (580)
Q Consensus 158 L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~c 214 (580)
|+|++|++++..+ +..+++|+.|++++|++++..+ ...++++..+++.+|....
T Consensus 292 L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 292 LELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp EECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCCCC
T ss_pred EEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCccCC
Confidence 9999999997655 7889999999999999998876 5567888888888886543
No 335
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.85 E-value=2.1e-21 Score=197.03 Aligned_cols=174 Identities=30% Similarity=0.340 Sum_probs=141.2
Q ss_pred CCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCcccc-CCCCCcEEEcCCCCCCCCCC-CCcCCCCCceEeCc
Q 038098 18 LQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFG-NLTNLRNLYLGSNKLTSIPS-TLWNLKDILYLDLS 95 (580)
Q Consensus 18 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~l~~N~l~~lp~-~~~~l~~L~~L~l~ 95 (580)
-+++++++|.++ .+|..+. +.+++|+|++|+|+++.+..|. ++++|++|+|++|+|+.++. .|.++++|++|+|+
T Consensus 20 ~~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 20 SNILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TTEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 368999999998 5666554 4689999999999988888887 89999999999999999875 57788899999988
Q ss_pred CCcc------cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCccc---ccccccccccccccccC
Q 038098 96 SNFL------LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSI---GDLINLKSLNLSNNNLS 166 (580)
Q Consensus 96 ~n~l------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~---~~l~~L~~L~l~~N~l~ 166 (580)
+|+| .+.++++|+.|+|++|.|+.+.+..|..+++|+.|+|++|.|++..+..| ..+++|+.|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 8888 36778888888888888888888888888889999999998884434444 56888888899999888
Q ss_pred CCccccccccCc--ccEEEccCCcccCCCC
Q 038098 167 GTIPISLEKLLD--LKDINVSFNKLEGEIP 194 (580)
Q Consensus 167 ~~~~~~~~~l~~--L~~l~l~~N~l~~~~~ 194 (580)
...+..+..++. ++.|++++|++.|.+.
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred ccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 666677777776 4778888888887664
No 336
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.85 E-value=2.3e-21 Score=208.44 Aligned_cols=172 Identities=26% Similarity=0.373 Sum_probs=155.2
Q ss_pred cCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCCcCCCCCce
Q 038098 12 VGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTLWNLKDILY 91 (580)
Q Consensus 12 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~~~l~~L~~ 91 (580)
+..|++|+.|+|++|.|.. +| .|..+++|++|+|++|.|+++.+ |..+++|+.|+|++|+|+.+| .+..+++|+.
T Consensus 39 ~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-~l~~l~~L~~ 113 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDLS-SLKDLKKLKS 113 (605)
T ss_dssp HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCT-TSTTCTTCCE
T ss_pred hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCCh-hhccCCCCCE
Confidence 5678999999999999984 44 58999999999999999997655 999999999999999999987 6889999999
Q ss_pred EeCcCCcc----cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccccccccccccCC
Q 038098 92 LDLSSNFL----LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSG 167 (580)
Q Consensus 92 L~l~~n~l----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 167 (580)
|+|++|++ .+..+++|+.|+|++|.++++ ..+..+++|+.|+|++|.|++..| +..+++|+.|+|++|+|++
T Consensus 114 L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~ 189 (605)
T 1m9s_A 114 LSLEHNGISDINGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 189 (605)
T ss_dssp EECTTSCCCCCGGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred EEecCCCCCCCccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC
Confidence 99999999 377899999999999999976 678999999999999999996655 8999999999999999996
Q ss_pred CccccccccCcccEEEccCCcccCCCC
Q 038098 168 TIPISLEKLLDLKDINVSFNKLEGEIP 194 (580)
Q Consensus 168 ~~~~~~~~l~~L~~l~l~~N~l~~~~~ 194 (580)
. | .+..+++|+.|+|++|++++.+.
T Consensus 190 l-~-~l~~l~~L~~L~L~~N~l~~~p~ 214 (605)
T 1m9s_A 190 L-R-ALAGLKNLDVLELFSQECLNKPI 214 (605)
T ss_dssp C-G-GGTTCTTCSEEECCSEEEECCCC
T ss_pred C-h-HHccCCCCCEEEccCCcCcCCcc
Confidence 4 3 68899999999999999988654
No 337
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.85 E-value=1.1e-20 Score=178.82 Aligned_cols=157 Identities=25% Similarity=0.359 Sum_probs=135.2
Q ss_pred CCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCC-cCCCCCceEeCcC
Q 038098 18 LQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTL-WNLKDILYLDLSS 96 (580)
Q Consensus 18 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~-~~l~~L~~L~l~~ 96 (580)
.+.++++++.++ .+|..+. ++|++|+|++|.|+++.|..|.++++|++|+|++|+|+.+|... ..+
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l---------- 87 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSL---------- 87 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC----------
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccC----------
Confidence 578999999998 5665554 78999999999999988999999999999999999999988643 344
Q ss_pred CcccccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccccccccccccCCCcccccccc
Q 038098 97 NFLLIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKL 176 (580)
Q Consensus 97 n~l~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 176 (580)
++|+.|+|++|.|+++++..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..+..+
T Consensus 88 --------~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 158 (229)
T 3e6j_A 88 --------TQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRL 158 (229)
T ss_dssp --------TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTC
T ss_pred --------CCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCC
Confidence 45567777777777777788899999999999999999 788889999999999999999997777889999
Q ss_pred CcccEEEccCCcccCCCCCC
Q 038098 177 LDLKDINVSFNKLEGEIPNK 196 (580)
Q Consensus 177 ~~L~~l~l~~N~l~~~~~~~ 196 (580)
++|+.|++++|+++|.++..
T Consensus 159 ~~L~~L~l~~N~~~c~c~~~ 178 (229)
T 3e6j_A 159 SSLTHAYLFGNPWDCECRDI 178 (229)
T ss_dssp TTCCEEECTTSCBCTTBGGG
T ss_pred CCCCEEEeeCCCccCCcchh
Confidence 99999999999999988643
No 338
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=1.2e-20 Score=200.60 Aligned_cols=171 Identities=24% Similarity=0.296 Sum_probs=106.3
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP 80 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp 80 (580)
+|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. |.+ +|++|+|++|+|+.+|
T Consensus 68 ~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~lp 136 (571)
T 3cvr_A 68 RLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTMLP 136 (571)
T ss_dssp SSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSCCC
T ss_pred CCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCCCC
Confidence 355654 555442 66777777777776 445 345667777777777765 444 444 6777777777777766
Q ss_pred CCCcCCCCCceEeCcCCccc--ccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCccccccccc---
Q 038098 81 STLWNLKDILYLDLSSNFLL--IGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINL--- 155 (580)
Q Consensus 81 ~~~~~l~~L~~L~l~~n~l~--~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L--- 155 (580)
. .+++|++|+|++|+|. -..+++|+.|+|++|.|+++ |. |. ++|+.|+|++|.|+ .+|. |.. +|
T Consensus 137 ~---~l~~L~~L~Ls~N~l~~lp~~l~~L~~L~Ls~N~L~~l-p~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~ 205 (571)
T 3cvr_A 137 E---LPALLEYINADNNQLTMLPELPTSLEVLSVRNNQLTFL-PE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHS 205 (571)
T ss_dssp C---CCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCC-CC-CC--TTCCEEECCSSCCS-SCCC-CC--------
T ss_pred C---cCccccEEeCCCCccCcCCCcCCCcCEEECCCCCCCCc-ch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcc
Confidence 5 4566777777777662 12345677777777777663 33 44 66777777777776 5555 443 55
Q ss_pred ----ccccccccccCCCccccccccCcccEEEccCCcccCCCC
Q 038098 156 ----KSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIP 194 (580)
Q Consensus 156 ----~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 194 (580)
+.|+|++|+|+ .+|..+..+++|+.|++++|++++.+|
T Consensus 206 ~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 206 EETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp --CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHH
T ss_pred cccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCH
Confidence 77777777777 456666667777777777777766544
No 339
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.83 E-value=1.3e-20 Score=190.40 Aligned_cols=204 Identities=19% Similarity=0.177 Sum_probs=162.1
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCc-CCCccccCCCCCcE-EEcCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDG-FVPACFGNLTNLRN-LYLGSNKLTS 78 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~-L~l~~N~l~~ 78 (580)
+|+++ .+|..+ .+++++|+|++|+|+.+.+++|.++++|++|+|++|++.+ +.++.|.++++|++ +.+++|+|+.
T Consensus 18 ~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~ 94 (350)
T 4ay9_X 18 ESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLY 94 (350)
T ss_dssp STTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCE
T ss_pred CCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccc
Confidence 35666 677766 3789999999999997777889999999999999999865 44568999999875 6777899999
Q ss_pred CC-CCCcCCCCCceEeCcCCccc------ccCCCcccEEeCCC-CcCCCCCCcccCCcc-ccceeccccccccccCCccc
Q 038098 79 IP-STLWNLKDILYLDLSSNFLL------IGNLKVLVQVDLSM-NNFSDVIPTTIGGLK-DLQYLFLEYNRLQGSIPDSI 149 (580)
Q Consensus 79 lp-~~~~~l~~L~~L~l~~n~l~------~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~p~~~ 149 (580)
++ ..+..+++|++|++++|++. +....++..|++++ |.+..+.+..|..+. .++.|+|++|+|+ .+|...
T Consensus 95 l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~ 173 (350)
T 4ay9_X 95 INPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSA 173 (350)
T ss_dssp ECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTS
T ss_pred cCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-CCChhh
Confidence 86 46778999999999999983 34556777888855 678877778888775 6889999999999 555555
Q ss_pred ccccccccccccc-cccCCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCCC
Q 038098 150 GDLINLKSLNLSN-NNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGN 210 (580)
Q Consensus 150 ~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n 210 (580)
....+|+.|++++ |.++...+..|..+++|+.|++++|+|+..++.. +..+..+...++
T Consensus 174 f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~--~~~L~~L~~l~~ 233 (350)
T 4ay9_X 174 FNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG--LENLKKLRARST 233 (350)
T ss_dssp STTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS--CTTCCEEECTTC
T ss_pred ccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh--hccchHhhhccC
Confidence 5668899999975 7788555677899999999999999999887654 445554444333
No 340
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=1e-20 Score=177.73 Aligned_cols=146 Identities=25% Similarity=0.362 Sum_probs=123.6
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP 80 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp 80 (580)
+|+++ .+|..+. ++|+.|+|++|+|+.+.+..|..+++|++|+|++|+|+++.|..|.++++|++|+|++|+|+.+|
T Consensus 20 ~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~ 96 (220)
T 2v9t_B 20 GKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELP 96 (220)
T ss_dssp TSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCC
T ss_pred CCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccC
Confidence 35555 5666554 78999999999999888889999999999999999999999999999999999999999999998
Q ss_pred CCC-cCCCCCceEeCcCCcccccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCccccccccccccc
Q 038098 81 STL-WNLKDILYLDLSSNFLLIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLN 159 (580)
Q Consensus 81 ~~~-~~l~~L~~L~l~~n~l~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 159 (580)
... ..++ +|+.|+|++|.++++.+..|..+++|+.|+|++|.|++..+..|..+++|+.|+
T Consensus 97 ~~~f~~l~------------------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 158 (220)
T 2v9t_B 97 KSLFEGLF------------------SLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMH 158 (220)
T ss_dssp TTTTTTCT------------------TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred HhHccCCC------------------CCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEE
Confidence 764 3444 456666677777777788888888999999999999877777788888999999
Q ss_pred ccccccCC
Q 038098 160 LSNNNLSG 167 (580)
Q Consensus 160 l~~N~l~~ 167 (580)
|++|.+..
T Consensus 159 L~~N~~~c 166 (220)
T 2v9t_B 159 LAQNPFIC 166 (220)
T ss_dssp CCSSCEEC
T ss_pred eCCCCcCC
Confidence 99998874
No 341
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=1.7e-20 Score=174.76 Aligned_cols=159 Identities=28% Similarity=0.343 Sum_probs=133.9
Q ss_pred CCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCCcCCCCCceEeCcCC
Q 038098 18 LQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTLWNLKDILYLDLSSN 97 (580)
Q Consensus 18 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~~~l~~L~~L~l~~n 97 (580)
-+.++++++.++ .+|..+ .++|++|+|++|+++++.+..|.++++|++|+|++|+|+.+|...+
T Consensus 9 ~~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~------------- 72 (208)
T 2o6s_A 9 GTTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVF------------- 72 (208)
T ss_dssp TTEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTT-------------
T ss_pred CCEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhc-------------
Confidence 367889999998 455544 3589999999999998888889999999999999999998876432
Q ss_pred cccccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccccccccccccCCCccccccccC
Q 038098 98 FLLIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKLL 177 (580)
Q Consensus 98 ~l~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 177 (580)
..+++|+.|++++|.++++++..|..+++|+.|+|++|.|++..+..|..+++|+.|+|++|++++..+..+..++
T Consensus 73 ----~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 148 (208)
T 2o6s_A 73 ----NKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLT 148 (208)
T ss_dssp ----TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCT
T ss_pred ----CCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCC
Confidence 2344556667777777777777889999999999999999977777789999999999999999987777799999
Q ss_pred cccEEEccCCcccCCCCCC
Q 038098 178 DLKDINVSFNKLEGEIPNK 196 (580)
Q Consensus 178 ~L~~l~l~~N~l~~~~~~~ 196 (580)
+|+.|++++|++.+.++..
T Consensus 149 ~L~~L~l~~N~~~~~~~~l 167 (208)
T 2o6s_A 149 SLQYIWLHDNPWDCTCPGI 167 (208)
T ss_dssp TCCEEECCSCCBCCCTTTT
T ss_pred CccEEEecCCCeecCCCCH
Confidence 9999999999999887653
No 342
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.82 E-value=3.9e-21 Score=185.74 Aligned_cols=169 Identities=22% Similarity=0.306 Sum_probs=137.9
Q ss_pred CCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCCcCCCCCceEe
Q 038098 14 KLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTLWNLKDILYLD 93 (580)
Q Consensus 14 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~~~l~~L~~L~ 93 (580)
.+.++..+++++|.++. ++ .+..+++|++|++++|.|+.+ + .+..+++|++|+|++|+|+.++. +..+++|++|+
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~ 91 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEE
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEE
Confidence 46667778888888873 33 577888888888888888854 3 67888888888888888888876 77888888888
Q ss_pred CcCCccc----ccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccccccccccccCCCc
Q 038098 94 LSSNFLL----IGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTI 169 (580)
Q Consensus 94 l~~n~l~----~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 169 (580)
|++|++. +.. ++|+.|++++|.+++. ..+..+++|+.|+|++|+|++ ++ .+..+++|+.|+|++|++++.
T Consensus 92 L~~N~l~~l~~~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~- 165 (263)
T 1xeu_A 92 VNRNRLKNLNGIPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT- 165 (263)
T ss_dssp CCSSCCSCCTTCCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC-
T ss_pred CCCCccCCcCcccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch-
Confidence 8888872 233 7889999999999875 358899999999999999985 44 688899999999999999966
Q ss_pred cccccccCcccEEEccCCcccCCCC
Q 038098 170 PISLEKLLDLKDINVSFNKLEGEIP 194 (580)
Q Consensus 170 ~~~~~~l~~L~~l~l~~N~l~~~~~ 194 (580)
..+..+++|+.|++++|++++.+.
T Consensus 166 -~~l~~l~~L~~L~l~~N~~~~~~~ 189 (263)
T 1xeu_A 166 -GGLTRLKKVNWIDLTGQKCVNEPV 189 (263)
T ss_dssp -TTSTTCCCCCEEEEEEEEEECCCE
T ss_pred -HHhccCCCCCEEeCCCCcccCCcc
Confidence 678899999999999999987753
No 343
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.82 E-value=1.6e-22 Score=207.35 Aligned_cols=155 Identities=19% Similarity=0.256 Sum_probs=68.8
Q ss_pred hCCCCCceeeCCCCcCCc----CCCccccCCCCCcEEEcCCCCCCC-----CCCCCcCC---------CCCceEeCcCCc
Q 038098 37 CRLAALFELDSGGNKLDG----FVPACFGNLTNLRNLYLGSNKLTS-----IPSTLWNL---------KDILYLDLSSNF 98 (580)
Q Consensus 37 ~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~l~~N~l~~-----lp~~~~~l---------~~L~~L~l~~n~ 98 (580)
..+++|++|+|++|.++. .++..+..+++|++|+|++|+|+. ++..+..+ ++|++|+|++|+
T Consensus 91 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~ 170 (386)
T 2ca6_A 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR 170 (386)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC
T ss_pred hhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCC
Confidence 344445555555554443 233344444455555555554432 11112222 445555555554
Q ss_pred cc----------ccCCCcccEEeCCCCcCCC-----CCCcccCCccccceecccccccc----ccCCccccccccccccc
Q 038098 99 LL----------IGNLKVLVQVDLSMNNFSD-----VIPTTIGGLKDLQYLFLEYNRLQ----GSIPDSIGDLINLKSLN 159 (580)
Q Consensus 99 l~----------~~~l~~L~~L~l~~N~l~~-----~~~~~~~~l~~L~~L~l~~n~l~----~~~p~~~~~l~~L~~L~ 159 (580)
+. +..+++|+.|+|++|.++. ..+..+..+++|+.|+|++|.++ ..+|..+..+++|+.|+
T Consensus 171 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~ 250 (386)
T 2ca6_A 171 LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELG 250 (386)
T ss_dssp CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred CCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEE
Confidence 41 2234445555555554441 11224444455555555555553 23444444455555555
Q ss_pred ccccccCCC----cccccc--ccCcccEEEccCCcccC
Q 038098 160 LSNNNLSGT----IPISLE--KLLDLKDINVSFNKLEG 191 (580)
Q Consensus 160 l~~N~l~~~----~~~~~~--~l~~L~~l~l~~N~l~~ 191 (580)
|++|.+++. ++..+. .+++|+.|++++|+++.
T Consensus 251 L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 251 LNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp CTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred CCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCH
Confidence 555555433 233332 24455555555555544
No 344
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.82 E-value=2.1e-21 Score=197.13 Aligned_cols=211 Identities=18% Similarity=0.167 Sum_probs=164.4
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCc----hhhhCCC-CCceeeCCCCcCCcCCCccccCC-----CCCcEEE
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIP----DDLCRLA-ALFELDSGGNKLDGFVPACFGNL-----TNLRNLY 70 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~ 70 (580)
+|++++.+|..+...++|++|+|++|.|+...+ +.|..++ +|++|+|++|.|++..+..|..+ ++|++|+
T Consensus 7 ~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~ 86 (362)
T 3goz_A 7 LHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLN 86 (362)
T ss_dssp CCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEE
T ss_pred cccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEE
Confidence 478888888888888889999999999997777 7888898 89999999999998877777665 9999999
Q ss_pred cCCCCCCCCCCC-----CcCC-CCCceEeCcCCccc----------ccC-CCcccEEeCCCCcCCCCCCc----ccCCcc
Q 038098 71 LGSNKLTSIPST-----LWNL-KDILYLDLSSNFLL----------IGN-LKVLVQVDLSMNNFSDVIPT----TIGGLK 129 (580)
Q Consensus 71 l~~N~l~~lp~~-----~~~l-~~L~~L~l~~n~l~----------~~~-l~~L~~L~l~~N~l~~~~~~----~~~~l~ 129 (580)
|++|+|+..+.. +..+ ++|++|+|++|++. +.. .++|++|+|++|.++..... .+..++
T Consensus 87 Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~ 166 (362)
T 3goz_A 87 LSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIP 166 (362)
T ss_dssp CCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSC
T ss_pred CcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCC
Confidence 999999875432 4444 79999999999983 233 36999999999999864433 334555
Q ss_pred -ccceeccccccccccCCccccc----c-cccccccccccccCCC----ccccccc-cCcccEEEccCCcccCCCC----
Q 038098 130 -DLQYLFLEYNRLQGSIPDSIGD----L-INLKSLNLSNNNLSGT----IPISLEK-LLDLKDINVSFNKLEGEIP---- 194 (580)
Q Consensus 130 -~L~~L~l~~n~l~~~~p~~~~~----l-~~L~~L~l~~N~l~~~----~~~~~~~-l~~L~~l~l~~N~l~~~~~---- 194 (580)
+|+.|+|++|.+++..+..+.. + ++|+.|+|++|.+++. ++..+.. .++|+.|++++|+++...+
T Consensus 167 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~ 246 (362)
T 3goz_A 167 ANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLK 246 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHH
T ss_pred ccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHH
Confidence 8999999999998766654443 4 5999999999999863 4455555 3589999999999987654
Q ss_pred -CCCCCccCccccCCCCc
Q 038098 195 -NKGPFRNFSTESFEGNE 211 (580)
Q Consensus 195 -~~~~~~~l~~~~~~~n~ 211 (580)
....++.+..+++.+|.
T Consensus 247 ~~~~~l~~L~~L~L~~n~ 264 (362)
T 3goz_A 247 LLKDSLKHLQTVYLDYDI 264 (362)
T ss_dssp HTTTTTTTCSEEEEEHHH
T ss_pred HHHhcCCCccEEEeccCC
Confidence 12445667777777665
No 345
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.81 E-value=1.9e-19 Score=193.87 Aligned_cols=54 Identities=30% Similarity=0.247 Sum_probs=31.6
Q ss_pred cccccccccccccCCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCCCccc
Q 038098 153 INLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNELL 213 (580)
Q Consensus 153 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~ 213 (580)
++|+.|+|++|+|++ +| ..+++|+.|++++|+|+..++ .++++..+++++|...
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~lp~---~~~~L~~L~Ls~N~L~ 274 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTSLPM---LPSGLLSLSVYRNQLT 274 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCcCCc---ccccCcEEeCCCCCCC
Confidence 456666666666663 33 334566666666666665444 3455666666666543
No 346
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.81 E-value=1.4e-19 Score=192.34 Aligned_cols=183 Identities=23% Similarity=0.242 Sum_probs=153.7
Q ss_pred ccCCCC-----CCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCCcC
Q 038098 11 AVGKLQ-----KLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTLWN 85 (580)
Q Consensus 11 ~~~~l~-----~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~~~ 85 (580)
++..++ +|+.|+|++|+|++ +|..+. ++|++|+|++|+|+. +| ..+++|++|+|++|+|+.+|. +.+
T Consensus 49 ~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~~-ip---~~l~~L~~L~Ls~N~l~~ip~-l~~ 120 (571)
T 3cvr_A 49 AVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALIS-LP---ELPASLEYLDACDNRLSTLPE-LPA 120 (571)
T ss_dssp HHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC-CCT
T ss_pred hhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCcc-cc---cccCCCCEEEccCCCCCCcch-hhc
Confidence 455555 89999999999996 666553 799999999999994 55 557999999999999999998 665
Q ss_pred CCCCceEeCcCCccc--ccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCccccccccccccccccc
Q 038098 86 LKDILYLDLSSNFLL--IGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNN 163 (580)
Q Consensus 86 l~~L~~L~l~~n~l~--~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N 163 (580)
+|++|+|++|+|. -..+++|+.|+|++|.|+++++ .+++|+.|+|++|.|++ +|. |. ++|+.|+|++|
T Consensus 121 --~L~~L~Ls~N~l~~lp~~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N 190 (571)
T 3cvr_A 121 --SLKHLDVDNNQLTMLPELPALLEYINADNNQLTMLPE----LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTN 190 (571)
T ss_dssp --TCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSS
T ss_pred --CCCEEECCCCcCCCCCCcCccccEEeCCCCccCcCCC----cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCC
Confidence 9999999999983 1267799999999999997543 57899999999999995 777 65 89999999999
Q ss_pred ccCCCccccccccCcc-------cEEEccCCcccCCCCCCCCCccCccccCCCCccccC
Q 038098 164 NLSGTIPISLEKLLDL-------KDINVSFNKLEGEIPNKGPFRNFSTESFEGNELLCG 215 (580)
Q Consensus 164 ~l~~~~~~~~~~l~~L-------~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~c~ 215 (580)
+|+ .+|. +.. +| +.|++++|+|+.+++....++++..+++.+|++.+.
T Consensus 191 ~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~L~~N~l~~~ 245 (571)
T 3cvr_A 191 LLE-SLPA-VPV--RNHHSEETEIFFRCRENRITHIPENILSLDPTCTIILEDNPLSSR 245 (571)
T ss_dssp CCS-SCCC-CC----------CCEEEECCSSCCCCCCGGGGGSCTTEEEECCSSSCCHH
T ss_pred CCC-chhh-HHH--hhhcccccceEEecCCCcceecCHHHhcCCCCCEEEeeCCcCCCc
Confidence 999 6666 554 77 999999999998877777789999999999987653
No 347
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=5.4e-20 Score=186.54 Aligned_cols=164 Identities=27% Similarity=0.270 Sum_probs=143.2
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhh-CCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLC-RLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSI 79 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~l 79 (580)
+|+++ .+|..+. +.++.|+|++|+|+...++.|. .+++|++|+|++|+|+++.+..|.++++|++|+|++|+|+.+
T Consensus 27 ~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~ 103 (361)
T 2xot_A 27 KQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTL 103 (361)
T ss_dssp SSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcC
Confidence 35565 4676554 4689999999999988888887 999999999999999999889999999999999999999998
Q ss_pred CC-CCcCCCCCceEeCcCCcc------cccCCCcccEEeCCCCcCCCCCCccc---CCccccceeccccccccccCCccc
Q 038098 80 PS-TLWNLKDILYLDLSSNFL------LIGNLKVLVQVDLSMNNFSDVIPTTI---GGLKDLQYLFLEYNRLQGSIPDSI 149 (580)
Q Consensus 80 p~-~~~~l~~L~~L~l~~n~l------~~~~l~~L~~L~l~~N~l~~~~~~~~---~~l~~L~~L~l~~n~l~~~~p~~~ 149 (580)
+. .+..+++|++|+|++|+| .+.++++|+.|+|++|.|+++++..| ..+++|+.|+|++|+|++..+..+
T Consensus 104 ~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~ 183 (361)
T 2xot_A 104 DEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDL 183 (361)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHH
T ss_pred CHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHh
Confidence 76 577899999999999998 37789999999999999998877777 569999999999999996656778
Q ss_pred ccccc--cccccccccccCC
Q 038098 150 GDLIN--LKSLNLSNNNLSG 167 (580)
Q Consensus 150 ~~l~~--L~~L~l~~N~l~~ 167 (580)
..++. ++.|+|++|.+..
T Consensus 184 ~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 184 QKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp HHSCHHHHTTEECCSSCEEC
T ss_pred hhccHhhcceEEecCCCccC
Confidence 88877 4899999999984
No 348
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=5.4e-20 Score=180.56 Aligned_cols=187 Identities=24% Similarity=0.355 Sum_probs=162.1
Q ss_pred CCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCCcCCCCCceEeCc
Q 038098 16 QKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTLWNLKDILYLDLS 95 (580)
Q Consensus 16 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~~~l~~L~~L~l~ 95 (580)
.++..+.+..+.++... .+..+++|++|++++|.++.+ + .+..+++|++|+|++|+|+.++. +..+++|++|+|+
T Consensus 24 ~~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~ 98 (291)
T 1h6t_A 24 AETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLD 98 (291)
T ss_dssp HHHHHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECC
T ss_pred HHHHHHHhcCCCccccc--chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECC
Confidence 34555677888887433 356789999999999999965 3 48999999999999999999987 8899999999999
Q ss_pred CCcc----cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccccccccccccCCCccc
Q 038098 96 SNFL----LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPI 171 (580)
Q Consensus 96 ~n~l----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 171 (580)
+|++ .+..+++|+.|++++|.+++. ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|++++..+
T Consensus 99 ~n~l~~~~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~- 173 (291)
T 1h6t_A 99 ENKVKDLSSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 173 (291)
T ss_dssp SSCCCCGGGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-
T ss_pred CCcCCCChhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-
Confidence 9998 478899999999999999975 5688999999999999999954 578999999999999999997655
Q ss_pred cccccCcccEEEccCCcccCCCCCCCCCccCccccCCCCcccc
Q 038098 172 SLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNELLC 214 (580)
Q Consensus 172 ~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~c 214 (580)
+..+++|+.|++++|+++... ....++++..+++.+|+..+
T Consensus 174 -l~~l~~L~~L~L~~N~i~~l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 174 -LAGLTKLQNLYLSKNHISDLR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp -GTTCTTCCEEECCSSCCCBCG-GGTTCTTCSEEEEEEEEEEC
T ss_pred -hcCCCccCEEECCCCcCCCCh-hhccCCCCCEEECcCCcccC
Confidence 899999999999999999864 46778889999999998755
No 349
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.81 E-value=7.8e-22 Score=202.29 Aligned_cols=193 Identities=24% Similarity=0.287 Sum_probs=160.8
Q ss_pred CccccCCCccc-------CCCCCCCEEeccCCcCCC----CCchhhhCCCCCceeeCCCCcCCcCCCcccc----CC---
Q 038098 2 NNLNGSIPIAV-------GKLQKLQLLSLEDNQLEG----SIPDDLCRLAALFELDSGGNKLDGFVPACFG----NL--- 63 (580)
Q Consensus 2 N~~~~~~p~~~-------~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~----~l--- 63 (580)
|++++.+|..+ ..+++|++|+|++|.++. .+|..+..+++|++|+|++|.|+...+..+. .+
T Consensus 73 ~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~ 152 (386)
T 2ca6_A 73 GRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVN 152 (386)
T ss_dssp TSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhh
Confidence 45666677665 789999999999999996 3778899999999999999999754444443 33
Q ss_pred ------CCCcEEEcCCCCCC--CCC---CCCcCCCCCceEeCcCCccc-----------ccCCCcccEEeCCCCcCC---
Q 038098 64 ------TNLRNLYLGSNKLT--SIP---STLWNLKDILYLDLSSNFLL-----------IGNLKVLVQVDLSMNNFS--- 118 (580)
Q Consensus 64 ------~~L~~L~l~~N~l~--~lp---~~~~~l~~L~~L~l~~n~l~-----------~~~l~~L~~L~l~~N~l~--- 118 (580)
++|++|+|++|+|+ .+| ..+..+++|++|+|++|++. +..+++|+.|+|++|.++
T Consensus 153 ~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g 232 (386)
T 2ca6_A 153 KKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLG 232 (386)
T ss_dssp HHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHH
T ss_pred hhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHH
Confidence 99999999999997 344 45667899999999999983 457889999999999996
Q ss_pred -CCCCcccCCccccceecccccccccc----CCcccc--cccccccccccccccCC----Cccccc-cccCcccEEEccC
Q 038098 119 -DVIPTTIGGLKDLQYLFLEYNRLQGS----IPDSIG--DLINLKSLNLSNNNLSG----TIPISL-EKLLDLKDINVSF 186 (580)
Q Consensus 119 -~~~~~~~~~l~~L~~L~l~~n~l~~~----~p~~~~--~l~~L~~L~l~~N~l~~----~~~~~~-~~l~~L~~l~l~~ 186 (580)
..++..+..+++|+.|+|++|.|++. ++..+. .+++|+.|+|++|.+++ .+|..+ .++++|+.|++++
T Consensus 233 ~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~ 312 (386)
T 2ca6_A 233 SSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNG 312 (386)
T ss_dssp HHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTT
T ss_pred HHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccC
Confidence 45677889999999999999999865 566664 38999999999999997 377777 6689999999999
Q ss_pred CcccCCCC
Q 038098 187 NKLEGEIP 194 (580)
Q Consensus 187 N~l~~~~~ 194 (580)
|++++..+
T Consensus 313 N~l~~~~~ 320 (386)
T 2ca6_A 313 NRFSEEDD 320 (386)
T ss_dssp SBSCTTSH
T ss_pred CcCCcchh
Confidence 99986653
No 350
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.81 E-value=2.5e-20 Score=194.53 Aligned_cols=194 Identities=21% Similarity=0.248 Sum_probs=143.6
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCC-------------ceeeCCCCcCCcCCCccccCCCCCc
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAAL-------------FELDSGGNKLDGFVPACFGNLTNLR 67 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-------------~~L~L~~N~l~~~~~~~~~~l~~L~ 67 (580)
+|++ +.+|.+|+++++|++|+|++|.+.+.+|..++++++| ++|++++|.++++ |.. .++|+
T Consensus 20 ~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~l-p~~---~~~L~ 94 (454)
T 1jl5_A 20 SSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSL-PEL---PPHLE 94 (454)
T ss_dssp ---------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCC-CSC---CTTCS
T ss_pred cCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccC-CCC---cCCCC
Confidence 4677 7899999999999999999999988899988888764 8999999999864 332 37899
Q ss_pred EEEcCCCCCCCCCCCCcCCCCCceEeCcCCccc-ccCC-CcccEEeCCCCcCCCCCCcccCCccccceeccccccccccC
Q 038098 68 NLYLGSNKLTSIPSTLWNLKDILYLDLSSNFLL-IGNL-KVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSI 145 (580)
Q Consensus 68 ~L~l~~N~l~~lp~~~~~l~~L~~L~l~~n~l~-~~~l-~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 145 (580)
+|++++|+++.+|.. +++|++|++++|++. +..+ ++|+.|++++|.++++ | .|..+++|+.|++++|.+++ +
T Consensus 95 ~L~l~~n~l~~lp~~---~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~l-p-~~~~l~~L~~L~l~~N~l~~-l 168 (454)
T 1jl5_A 95 SLVASCNSLTELPEL---PQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKL-P-ELQNSSFLKIIDVDNNSLKK-L 168 (454)
T ss_dssp EEECCSSCCSSCCCC---CTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSC-C
T ss_pred EEEccCCcCCccccc---cCCCcEEECCCCccCcccCCCCCCCEEECcCCCCCCC-c-ccCCCCCCCEEECCCCcCcc-c
Confidence 999999999998864 378999999999884 3333 5899999999999874 4 58899999999999999984 6
Q ss_pred CcccccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCCCccc
Q 038098 146 PDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNELL 213 (580)
Q Consensus 146 p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~ 213 (580)
|..+ .+|++|++++|++++ +| .+..+++|+.|++++|.+++.+.. ..+++.+++.+|...
T Consensus 169 p~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~~---~~~L~~L~l~~n~l~ 228 (454)
T 1jl5_A 169 PDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPDL---PLSLESIVAGNNILE 228 (454)
T ss_dssp CCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCCC---CTTCCEEECCSSCCS
T ss_pred CCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCCC---cCcccEEECcCCcCC
Confidence 6543 489999999999985 55 588889999999999988875432 246667777777543
No 351
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.81 E-value=5.8e-20 Score=177.50 Aligned_cols=155 Identities=19% Similarity=0.280 Sum_probs=137.4
Q ss_pred CccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCC
Q 038098 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPS 81 (580)
Q Consensus 2 N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~ 81 (580)
|+++++. .+..+++|++|++++|.|+ .+| .+..+++|++|+|++|+|+++.+ |.++++|++|+|++|+|+.+|.
T Consensus 29 ~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~l~~ 102 (263)
T 1xeu_A 29 QSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKNLNG 102 (263)
T ss_dssp SCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSCCTT
T ss_pred CCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCCcCc
Confidence 5555443 6889999999999999998 455 78999999999999999997655 9999999999999999999986
Q ss_pred CCcCCCCCceEeCcCCcc----cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCccccccccccc
Q 038098 82 TLWNLKDILYLDLSSNFL----LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKS 157 (580)
Q Consensus 82 ~~~~l~~L~~L~l~~n~l----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 157 (580)
... ++|++|+|++|++ .+..+++|+.|++++|+++++ ..+..+++|+.|+|++|++++. ..+..+++|+.
T Consensus 103 ~~~--~~L~~L~L~~N~l~~~~~l~~l~~L~~L~Ls~N~i~~~--~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~ 176 (263)
T 1xeu_A 103 IPS--ACLSRLFLDNNELRDTDSLIHLKNLEILSIRNNKLKSI--VMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNW 176 (263)
T ss_dssp CCC--SSCCEEECCSSCCSBSGGGTTCTTCCEEECTTSCCCBC--GGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCE
T ss_pred ccc--CcccEEEccCCccCCChhhcCcccccEEECCCCcCCCC--hHHccCCCCCEEECCCCcCcch--HHhccCCCCCE
Confidence 444 9999999999999 477899999999999999986 3688999999999999999965 67899999999
Q ss_pred ccccccccCCC
Q 038098 158 LNLSNNNLSGT 168 (580)
Q Consensus 158 L~l~~N~l~~~ 168 (580)
|++++|++++.
T Consensus 177 L~l~~N~~~~~ 187 (263)
T 1xeu_A 177 IDLTGQKCVNE 187 (263)
T ss_dssp EEEEEEEEECC
T ss_pred EeCCCCcccCC
Confidence 99999999965
No 352
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.81 E-value=2.3e-21 Score=196.83 Aligned_cols=213 Identities=21% Similarity=0.195 Sum_probs=169.7
Q ss_pred CCccccCCC----cccCCCC-CCCEEeccCCcCCCCCchhhhCC-----CCCceeeCCCCcCCcCCCcc----ccCC-CC
Q 038098 1 GNNLNGSIP----IAVGKLQ-KLQLLSLEDNQLEGSIPDDLCRL-----AALFELDSGGNKLDGFVPAC----FGNL-TN 65 (580)
Q Consensus 1 ~N~~~~~~p----~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~~~~----~~~l-~~ 65 (580)
+|+|++..+ .+|..++ +|++|+|++|.|+...+..|..+ ++|++|+|++|.+++..+.. +..+ ++
T Consensus 31 ~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~ 110 (362)
T 3goz_A 31 LNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFT 110 (362)
T ss_dssp TSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred CCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCC
Confidence 578887777 7888999 99999999999998888888776 99999999999999777664 4445 89
Q ss_pred CcEEEcCCCCCCCCCC-C----CcC-CCCCceEeCcCCccc----------ccCCC-cccEEeCCCCcCCCCCCcccC--
Q 038098 66 LRNLYLGSNKLTSIPS-T----LWN-LKDILYLDLSSNFLL----------IGNLK-VLVQVDLSMNNFSDVIPTTIG-- 126 (580)
Q Consensus 66 L~~L~l~~N~l~~lp~-~----~~~-l~~L~~L~l~~n~l~----------~~~l~-~L~~L~l~~N~l~~~~~~~~~-- 126 (580)
|++|+|++|+|+..+. . +.. .++|++|+|++|.+. +..++ +|+.|+|++|.+++..+..+.
T Consensus 111 L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~ 190 (362)
T 3goz_A 111 ITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKF 190 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHH
Confidence 9999999999988653 2 333 369999999999994 23454 999999999999887765444
Q ss_pred --Cc-cccceecccccccccc----CCccccc-ccccccccccccccCCCcc----ccccccCcccEEEccCCcccCCCC
Q 038098 127 --GL-KDLQYLFLEYNRLQGS----IPDSIGD-LINLKSLNLSNNNLSGTIP----ISLEKLLDLKDINVSFNKLEGEIP 194 (580)
Q Consensus 127 --~l-~~L~~L~l~~n~l~~~----~p~~~~~-l~~L~~L~l~~N~l~~~~~----~~~~~l~~L~~l~l~~N~l~~~~~ 194 (580)
.+ ++|+.|+|++|.|++. ++..+.. .++|+.|+|++|.+++..+ ..+..+++|+.|++++|.++...+
T Consensus 191 l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~ 270 (362)
T 3goz_A 191 LASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSK 270 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCH
T ss_pred HHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCH
Confidence 44 5999999999999863 4555655 3599999999999997654 345677999999999999665443
Q ss_pred --------CCCCCccCccccCCCCccc
Q 038098 195 --------NKGPFRNFSTESFEGNELL 213 (580)
Q Consensus 195 --------~~~~~~~l~~~~~~~n~~~ 213 (580)
....++.+..+++++|+..
T Consensus 271 ~~~~~l~~~~~~l~~L~~LdL~~N~l~ 297 (362)
T 3goz_A 271 EQCKALGAAFPNIQKIILVDKNGKEIH 297 (362)
T ss_dssp HHHHHHHTTSTTCCEEEEECTTSCBCC
T ss_pred HHHHHHHHHhccCCceEEEecCCCcCC
Confidence 2345666777888888753
No 353
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.81 E-value=5.4e-21 Score=192.19 Aligned_cols=209 Identities=17% Similarity=0.141 Sum_probs=155.2
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCC-CchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCC-CCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGS-IPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSN-KLTS 78 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N-~l~~ 78 (580)
+|.+++..+. +..+++|++|+|++|.++.. +|..+..+++|++|+|++|.+++..+..+..+++|++|+|++| .++.
T Consensus 79 ~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~ 157 (336)
T 2ast_B 79 RSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSE 157 (336)
T ss_dssp TCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCH
T ss_pred Cccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCH
Confidence 4666666554 56788999999999988755 7778888899999999999888777778888999999999998 6774
Q ss_pred --CCCCCcCCCCCceEeCcCC-ccc-------ccCCC-cccEEeCCCC--cCC-CCCCcccCCccccceecccccc-ccc
Q 038098 79 --IPSTLWNLKDILYLDLSSN-FLL-------IGNLK-VLVQVDLSMN--NFS-DVIPTTIGGLKDLQYLFLEYNR-LQG 143 (580)
Q Consensus 79 --lp~~~~~l~~L~~L~l~~n-~l~-------~~~l~-~L~~L~l~~N--~l~-~~~~~~~~~l~~L~~L~l~~n~-l~~ 143 (580)
++..+..+++|++|++++| .+. +..++ +|+.|++++| .++ +..+..+..+++|+.|+|++|. +++
T Consensus 158 ~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~ 237 (336)
T 2ast_B 158 FALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKN 237 (336)
T ss_dssp HHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCG
T ss_pred HHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCH
Confidence 6666677888999999998 763 56788 8999999998 454 3345666778899999999998 776
Q ss_pred cCCcccccccccccccccccc-cCCCccccccccCcccEEEccCCcccCCCCCCCCC-ccCccccCCCCccc
Q 038098 144 SIPDSIGDLINLKSLNLSNNN-LSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPF-RNFSTESFEGNELL 213 (580)
Q Consensus 144 ~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~-~~l~~~~~~~n~~~ 213 (580)
..+..+..+++|+.|++++|. +.......+..+++|+.|++++| ++... ...+ ..+..+.+..|...
T Consensus 238 ~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~~~--~~~l~~~l~~L~l~~n~l~ 306 (336)
T 2ast_B 238 DCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDGT--LQLLKEALPHLQINCSHFT 306 (336)
T ss_dssp GGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTTC--HHHHHHHSTTSEESCCCSC
T ss_pred HHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCHHH--HHHHHhhCcceEEecccCc
Confidence 777788888999999999985 33222235778889999999988 33211 1112 23455556555543
No 354
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.80 E-value=1.3e-19 Score=182.95 Aligned_cols=209 Identities=19% Similarity=0.192 Sum_probs=163.3
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCC-chhhhCCCCCce-eeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSI-PDDLCRLAALFE-LDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTS 78 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~-L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 78 (580)
+|+|+++.+.+|.++++|++|+|++|++.+.+ ++.|.++++|++ +.++.|+|+.+.|+.|.++++|++|++++|+|+.
T Consensus 39 ~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~ 118 (350)
T 4ay9_X 39 LTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKH 118 (350)
T ss_dssp SCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSS
T ss_pred CCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcccccccccccccccc
Confidence 58899777789999999999999999986544 467899999876 6778899999999999999999999999999999
Q ss_pred CCC-CCcCCCCCceEeCcC-Ccc------cccCCC-cccEEeCCCCcCCCCCCcccCCccccceecccc-ccccccCCcc
Q 038098 79 IPS-TLWNLKDILYLDLSS-NFL------LIGNLK-VLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEY-NRLQGSIPDS 148 (580)
Q Consensus 79 lp~-~~~~l~~L~~L~l~~-n~l------~~~~l~-~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~p~~ 148 (580)
+|. .+....++..|++.+ |++ .+..+. .++.|+|++|.|+.+.+..|. .++|+.|++++ |.++...+..
T Consensus 119 ~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~-~~~L~~l~l~~~n~l~~i~~~~ 197 (350)
T 4ay9_X 119 LPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFN-GTQLDELNLSDNNNLEELPNDV 197 (350)
T ss_dssp CCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSST-TEEEEEEECTTCTTCCCCCTTT
T ss_pred CCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhcc-ccchhHHhhccCCcccCCCHHH
Confidence 876 455778889999965 455 244554 688999999999987776664 56899999985 6677444467
Q ss_pred cccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCCCcccc
Q 038098 149 IGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNELLC 214 (580)
Q Consensus 149 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~c 214 (580)
|..+++|+.|||++|+|+...+..+. +|+.|.+.++.--...|....++++..+++. +++.|
T Consensus 198 f~~l~~L~~LdLs~N~l~~lp~~~~~---~L~~L~~l~~~~l~~lP~l~~l~~L~~l~l~-~~~~c 259 (350)
T 4ay9_X 198 FHGASGPVILDISRTRIHSLPSYGLE---NLKKLRARSTYNLKKLPTLEKLVALMEASLT-YPSHC 259 (350)
T ss_dssp TTTEECCSEEECTTSCCCCCCSSSCT---TCCEEECTTCTTCCCCCCTTTCCSCCEEECS-CHHHH
T ss_pred hccCcccchhhcCCCCcCccChhhhc---cchHhhhccCCCcCcCCCchhCcChhhCcCC-CCccc
Confidence 89999999999999999966555555 4555555444433445556667777777664 55555
No 355
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.80 E-value=1.2e-19 Score=198.45 Aligned_cols=185 Identities=22% Similarity=0.228 Sum_probs=152.1
Q ss_pred ccCCCCCCCEEeccCCcCCCC--Cc-----------------------hhhhCCCCCceeeCCCCcCCcCCC-ccccCCC
Q 038098 11 AVGKLQKLQLLSLEDNQLEGS--IP-----------------------DDLCRLAALFELDSGGNKLDGFVP-ACFGNLT 64 (580)
Q Consensus 11 ~~~~l~~L~~L~L~~n~l~~~--~p-----------------------~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~ 64 (580)
.+..+++|+.|++++|.+... .+ ..+..+++|+.++++.|.+....+ ..|..++
T Consensus 366 ~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~ 445 (635)
T 4g8a_A 366 SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLR 445 (635)
T ss_dssp CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCT
T ss_pred ccccccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhcccccccccccccccc
Confidence 344567777777777766421 22 334556666666666666543333 4678888
Q ss_pred CCcEEEcCCCCCCCCC-CCCcCCCCCceEeCcCCcc-------cccCCCcccEEeCCCCcCCCCCCcccCCccccceecc
Q 038098 65 NLRNLYLGSNKLTSIP-STLWNLKDILYLDLSSNFL-------LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFL 136 (580)
Q Consensus 65 ~L~~L~l~~N~l~~lp-~~~~~l~~L~~L~l~~n~l-------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 136 (580)
+++.+++++|+++.++ ..+..+++|+.|+|++|.+ .+..+++|+.|+|++|++++++|..|.++++|+.|+|
T Consensus 446 ~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~L 525 (635)
T 4g8a_A 446 NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 525 (635)
T ss_dssp TCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEEC
Confidence 9999999999988765 4566789999999999975 3678999999999999999999999999999999999
Q ss_pred ccccccccCCcccccccccccccccccccCCCcccccccc-CcccEEEccCCcccCCCCC
Q 038098 137 EYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKL-LDLKDINVSFNKLEGEIPN 195 (580)
Q Consensus 137 ~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l-~~L~~l~l~~N~l~~~~~~ 195 (580)
++|+|++..|..|..+++|+.|+|++|+|++..|..+..+ ++|+.|++++|+++|.+..
T Consensus 526 s~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 526 SHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp TTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred CCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 9999998888899999999999999999999999999988 6899999999999999864
No 356
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=2.1e-19 Score=168.65 Aligned_cols=155 Identities=21% Similarity=0.287 Sum_probs=127.0
Q ss_pred ceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCC-CCcCCCCCceEeCcCCcccccCCCcccEEeCCCCcCCCCC
Q 038098 43 FELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPS-TLWNLKDILYLDLSSNFLLIGNLKVLVQVDLSMNNFSDVI 121 (580)
Q Consensus 43 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~-~~~~l~~L~~L~l~~n~l~~~~l~~L~~L~l~~N~l~~~~ 121 (580)
+++++++|.++. +|..+. +.+++|+|++|+|+.++. .. +..+++|+.|+|++|.|+++.
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~-----------------~~~l~~L~~L~L~~N~i~~i~ 73 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGI-----------------FKKLPQLRKINFSNNKITDIE 73 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCC-----------------GGGCTTCCEEECCSSCCCEEC
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhh-----------------hccCCCCCEEECCCCcCCEEC
Confidence 467777777774 344432 345777777777777632 21 234556677777888888888
Q ss_pred CcccCCccccceeccccccccccCCcccccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCC-CCCCc
Q 038098 122 PTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPN-KGPFR 200 (580)
Q Consensus 122 ~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~~~ 200 (580)
+..|..+++|+.|+|++|.|++..+..|..+++|++|+|++|+|++..|..|..+++|+.|++++|++++..|. ...++
T Consensus 74 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 153 (220)
T 2v70_A 74 EGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLH 153 (220)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCT
T ss_pred HHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCC
Confidence 88999999999999999999988788899999999999999999988899999999999999999999998664 46788
Q ss_pred cCccccCCCCccccCCC
Q 038098 201 NFSTESFEGNELLCGMP 217 (580)
Q Consensus 201 ~l~~~~~~~n~~~c~~p 217 (580)
++..+++.+|++.|+++
T Consensus 154 ~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 154 SLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TCCEEECCSCCEECSGG
T ss_pred CCCEEEecCcCCcCCCc
Confidence 99999999999999754
No 357
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.80 E-value=7.4e-19 Score=189.18 Aligned_cols=187 Identities=26% Similarity=0.244 Sum_probs=103.4
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP 80 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp 80 (580)
+|+|+ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|+|+++ |. .+++|++|+|++|+|+.+|
T Consensus 49 ~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~l-p~---~l~~L~~L~Ls~N~l~~l~ 117 (622)
T 3g06_A 49 ESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTSL-PV---LPPGLLELSIFSNPLTHLP 117 (622)
T ss_dssp SSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSCC-CC---CCTTCCEEEECSCCCCCCC
T ss_pred CCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCcC-CC---CCCCCCEEECcCCcCCCCC
Confidence 35555 5565554 67777777777777 3443 456777777777777743 33 5566777777777666665
Q ss_pred CCCcCCCCCceEeCcCCccc--ccCCCcccEEeCCCCcCCCCCCccc-----------------CCccccceeccccccc
Q 038098 81 STLWNLKDILYLDLSSNFLL--IGNLKVLVQVDLSMNNFSDVIPTTI-----------------GGLKDLQYLFLEYNRL 141 (580)
Q Consensus 81 ~~~~~l~~L~~L~l~~n~l~--~~~l~~L~~L~l~~N~l~~~~~~~~-----------------~~l~~L~~L~l~~n~l 141 (580)
. .+++|+.|++++|++. ...+++|++|+|++|.+++++ ..+ ..+++|+.|+|++|.|
T Consensus 118 ~---~l~~L~~L~L~~N~l~~lp~~l~~L~~L~Ls~N~l~~l~-~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l 193 (622)
T 3g06_A 118 A---LPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLP-ALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQL 193 (622)
T ss_dssp C---CCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCC-CCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCC
T ss_pred C---CCCCcCEEECCCCCCCcCCCCCCCCCEEECcCCcCCCcC-CccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCC
Confidence 5 3345555555555542 112344555555555554321 111 1124555555555555
Q ss_pred cccCCcccccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCCCCCccCccccCCCCccc
Q 038098 142 QGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNELL 213 (580)
Q Consensus 142 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~ 213 (580)
+ .+|.. +++|+.|++++|.++ .+|.. +++|+.|++++|.+++.+ ..++++..+++++|...
T Consensus 194 ~-~l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~lp---~~l~~L~~L~Ls~N~L~ 254 (622)
T 3g06_A 194 A-SLPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTSLP---VLPSELKELMVSGNRLT 254 (622)
T ss_dssp S-CCCCC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCS
T ss_pred C-CCCCc---cchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCcCC---CCCCcCcEEECCCCCCC
Confidence 5 23322 245555555555555 23322 356777777777777644 23456666667666543
No 358
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.80 E-value=1.1e-18 Score=182.05 Aligned_cols=159 Identities=27% Similarity=0.344 Sum_probs=101.7
Q ss_pred CCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCCcCCCCCceEeCc
Q 038098 16 QKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTLWNLKDILYLDLS 95 (580)
Q Consensus 16 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~~~l~~L~~L~l~ 95 (580)
++|++|+|++|.+++ +| .|+++++|++|++++|++++ +|..+ ++|++|++++|+++.+| .+.++++|++|+++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l~-~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEELP-ELQNLPFLTAIYAD 203 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSCC-CCTTCTTCCEEECC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcCc-cccCCCCCCEEECC
Confidence 577777777777774 55 47777777777777777774 34332 47777777777777776 56777777777777
Q ss_pred CCcccc--cCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccccccccccccCCCccccc
Q 038098 96 SNFLLI--GNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISL 173 (580)
Q Consensus 96 ~n~l~~--~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~ 173 (580)
+|++.- ...++|+.|++++|.++.+ | .+..+++|+.|++++|++++ +|.. +++|+.|++++|++++ +|..
T Consensus 204 ~N~l~~l~~~~~~L~~L~l~~n~l~~l-p-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~- 275 (454)
T 1jl5_A 204 NNSLKKLPDLPLSLESIVAGNNILEEL-P-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL- 275 (454)
T ss_dssp SSCCSSCCCCCTTCCEEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC-
T ss_pred CCcCCcCCCCcCcccEEECcCCcCCcc-c-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc-
Confidence 777631 2234677777777777643 3 36677777777777777763 4432 2556666666666664 3322
Q ss_pred cccCcccEEEccCCcccC
Q 038098 174 EKLLDLKDINVSFNKLEG 191 (580)
Q Consensus 174 ~~l~~L~~l~l~~N~l~~ 191 (580)
+++|+.|++++|++++
T Consensus 276 --~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 276 --PQSLTFLDVSENIFSG 291 (454)
T ss_dssp --CTTCCEEECCSSCCSE
T ss_pred --cCcCCEEECcCCccCc
Confidence 2455555555555554
No 359
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=7.7e-19 Score=165.99 Aligned_cols=146 Identities=29% Similarity=0.362 Sum_probs=119.3
Q ss_pred CccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCC
Q 038098 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPS 81 (580)
Q Consensus 2 N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~ 81 (580)
|+++ .+|..+. ++|++|+|++|.|++..|..|..+++|++|+|++|+|+.+.+..|..+++|++|+|++|+|+.+|.
T Consensus 29 ~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~ 105 (229)
T 3e6j_A 29 KRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPS 105 (229)
T ss_dssp SCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccCh
Confidence 3444 6666554 899999999999998889999999999999999999998888889999999999999999999886
Q ss_pred C-CcCCCCCceEeCcCCcccccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccccccc
Q 038098 82 T-LWNLKDILYLDLSSNFLLIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNL 160 (580)
Q Consensus 82 ~-~~~l~~L~~L~l~~n~l~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 160 (580)
. +..+++| +.|+|++|.|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 106 ~~~~~l~~L------------------~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 166 (229)
T 3e6j_A 106 AVFDRLVHL------------------KELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYL 166 (229)
T ss_dssp TTTTTCTTC------------------CEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred hHhCcchhh------------------CeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEe
Confidence 5 4455555 55555555555 34667788888899999999888666677888888999999
Q ss_pred cccccCCCc
Q 038098 161 SNNNLSGTI 169 (580)
Q Consensus 161 ~~N~l~~~~ 169 (580)
++|.+.+..
T Consensus 167 ~~N~~~c~c 175 (229)
T 3e6j_A 167 FGNPWDCEC 175 (229)
T ss_dssp TTSCBCTTB
T ss_pred eCCCccCCc
Confidence 999888543
No 360
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=3.4e-19 Score=191.55 Aligned_cols=165 Identities=26% Similarity=0.366 Sum_probs=143.0
Q ss_pred CCccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCC
Q 038098 1 GNNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIP 80 (580)
Q Consensus 1 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp 80 (580)
+|+|..+ | .|..|++|+.|+|++|.|++..| +..+++|++|+|++|.|+++ ..+..+++|+.|+|++|+|+.++
T Consensus 52 ~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l~ 125 (605)
T 1m9s_A 52 NSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL--SSLKDLKKLKSLSLEHNGISDIN 125 (605)
T ss_dssp TCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC--TTSTTCTTCCEEECTTSCCCCCG
T ss_pred CCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC--hhhccCCCCCEEEecCCCCCCCc
Confidence 3566543 3 69999999999999999996554 99999999999999999964 37999999999999999999985
Q ss_pred CCCcCCCCCceEeCcCCcc----cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccc
Q 038098 81 STLWNLKDILYLDLSSNFL----LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLK 156 (580)
Q Consensus 81 ~~~~~l~~L~~L~l~~n~l----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 156 (580)
.+..+++|+.|+|++|++ .+..+++|+.|+|++|.+++..| +..+++|+.|+|++|.|++ +| .+..+++|+
T Consensus 126 -~l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~ 200 (605)
T 1m9s_A 126 -GLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLD 200 (605)
T ss_dssp -GGGGCTTCSEEECCSSCCCCCGGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCS
T ss_pred -cccCCCccCEEECCCCccCCchhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC-Ch-HHccCCCCC
Confidence 588899999999999999 47789999999999999998766 8999999999999999995 44 589999999
Q ss_pred cccccccccCCCcccccccc
Q 038098 157 SLNLSNNNLSGTIPISLEKL 176 (580)
Q Consensus 157 ~L~l~~N~l~~~~~~~~~~l 176 (580)
.|+|++|++++.....+..+
T Consensus 201 ~L~L~~N~l~~~p~~~~~~l 220 (605)
T 1m9s_A 201 VLELFSQECLNKPINHQSNL 220 (605)
T ss_dssp EEECCSEEEECCCCCCCSSC
T ss_pred EEEccCCcCcCCcccccccE
Confidence 99999999996544444433
No 361
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.78 E-value=3e-19 Score=164.73 Aligned_cols=153 Identities=21% Similarity=0.286 Sum_probs=103.0
Q ss_pred CCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCC-CCCCCcCCCCCce
Q 038098 13 GKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTS-IPSTLWNLKDILY 91 (580)
Q Consensus 13 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-lp~~~~~l~~L~~ 91 (580)
..+++|++|++++|.|+ .+| .+..+++|++|++++|.++. +..+..+++|++|+|++|+++. .+..+..
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~------ 110 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSG------ 110 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTT------
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcC------
Confidence 45566666666666666 344 46666666666666665542 2356666666666666666664 3444444
Q ss_pred EeCcCCcccccCCCcccEEeCCCCcCCCCCCcccCCccccceecccccc-ccccCCcccccccccccccccccccCCCcc
Q 038098 92 LDLSSNFLLIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNR-LQGSIPDSIGDLINLKSLNLSNNNLSGTIP 170 (580)
Q Consensus 92 L~l~~n~l~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 170 (580)
+++|+.|++++|.+++..+..+..+++|+.|+|++|. ++ .+| .+..+++|+.|++++|++++ ++
T Consensus 111 ------------l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~ 175 (197)
T 4ezg_A 111 ------------LTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR 175 (197)
T ss_dssp ------------CTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT
T ss_pred ------------CCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH
Confidence 4555666666677766667778888888888888887 65 555 58888888999999998885 33
Q ss_pred ccccccCcccEEEccCCcccC
Q 038098 171 ISLEKLLDLKDINVSFNKLEG 191 (580)
Q Consensus 171 ~~~~~l~~L~~l~l~~N~l~~ 191 (580)
.+..+++|+.|++++|++..
T Consensus 176 -~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 176 -GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp -TGGGCSSCCEEEECBC----
T ss_pred -HhccCCCCCEEEeeCcccCC
Confidence 67888889999999988764
No 362
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.78 E-value=1.5e-20 Score=188.89 Aligned_cols=201 Identities=18% Similarity=0.219 Sum_probs=149.4
Q ss_pred CcccCCC--CCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcC-CCccccCCCCCcEEEcCCCCCCC-CCCCCc
Q 038098 9 PIAVGKL--QKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGF-VPACFGNLTNLRNLYLGSNKLTS-IPSTLW 84 (580)
Q Consensus 9 p~~~~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~-lp~~~~ 84 (580)
|..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++. .+..+..+++|++|+|++|+++. .+..+.
T Consensus 61 ~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~ 139 (336)
T 2ast_B 61 PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLA 139 (336)
T ss_dssp HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHT
T ss_pred HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHh
Confidence 3445555 7888888888888865554 55788888888888888755 66778888888888888888874 555667
Q ss_pred CCCCCceEeCcCC-ccc-------ccCCCcccEEeCCCC-cCCCC-CCcccCCcc-ccceeccccc--ccc-ccCCcccc
Q 038098 85 NLKDILYLDLSSN-FLL-------IGNLKVLVQVDLSMN-NFSDV-IPTTIGGLK-DLQYLFLEYN--RLQ-GSIPDSIG 150 (580)
Q Consensus 85 ~l~~L~~L~l~~n-~l~-------~~~l~~L~~L~l~~N-~l~~~-~~~~~~~l~-~L~~L~l~~n--~l~-~~~p~~~~ 150 (580)
.+++|++|+|++| .+. +.++++|+.|++++| .+++. .+..+..++ +|+.|+|++| .++ +.+|..+.
T Consensus 140 ~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~ 219 (336)
T 2ast_B 140 KNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVR 219 (336)
T ss_dssp TCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHH
T ss_pred cCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHh
Confidence 7888888888888 452 556888888888888 88754 355677788 8888888888 454 35566777
Q ss_pred cccccccccccccc-cCCCccccccccCcccEEEccCCc-ccCC-CCCCCCCccCccccCCCC
Q 038098 151 DLINLKSLNLSNNN-LSGTIPISLEKLLDLKDINVSFNK-LEGE-IPNKGPFRNFSTESFEGN 210 (580)
Q Consensus 151 ~l~~L~~L~l~~N~-l~~~~~~~~~~l~~L~~l~l~~N~-l~~~-~~~~~~~~~l~~~~~~~n 210 (580)
.+++|+.|+|++|. +++..+..+..+++|+.|++++|. ++.. ......+++++.+++.++
T Consensus 220 ~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 220 RCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp HCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred hCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 88888888888888 776777788888888888888885 2211 012344666777777665
No 363
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.78 E-value=2.3e-19 Score=164.68 Aligned_cols=154 Identities=27% Similarity=0.359 Sum_probs=110.4
Q ss_pred ceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCC--CcCCCCCceEeCcCCcccccCCCcccEEeCCCCcCCCC
Q 038098 43 FELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPST--LWNLKDILYLDLSSNFLLIGNLKVLVQVDLSMNNFSDV 120 (580)
Q Consensus 43 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~--~~~l~~L~~L~l~~n~l~~~~l~~L~~L~l~~N~l~~~ 120 (580)
++|++++|+++. +|..+.. +|++|+|++|+|+.++.. +..+ ++|+.|+|++|.|+++
T Consensus 11 ~~l~~s~~~l~~-ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l------------------~~L~~L~Ls~N~l~~~ 69 (192)
T 1w8a_A 11 TTVDCTGRGLKE-IPRDIPL--HTTELLLNDNELGRISSDGLFGRL------------------PHLVKLELKRNQLTGI 69 (192)
T ss_dssp TEEECTTSCCSS-CCSCCCT--TCSEEECCSCCCCSBCCSCSGGGC------------------TTCCEEECCSSCCCCB
T ss_pred CEEEcCCCCcCc-CccCCCC--CCCEEECCCCcCCccCCccccccC------------------CCCCEEECCCCCCCCc
Confidence 678888888874 4544432 788888888888887653 4444 4556666777777777
Q ss_pred CCcccCCccccceeccccccccccCCcccccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCCCCCc
Q 038098 121 IPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNKGPFR 200 (580)
Q Consensus 121 ~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~ 200 (580)
.|..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|++++..|..+..+++|+.|++++|+++|.++......
T Consensus 70 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~ 149 (192)
T 1w8a_A 70 EPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAE 149 (192)
T ss_dssp CTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHH
T ss_pred CHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHH
Confidence 77888888888888888888887777778888888888888888887778888888888888888888888765332222
Q ss_pred cCccccCCCCccccCCC
Q 038098 201 NFSTESFEGNELLCGMP 217 (580)
Q Consensus 201 ~l~~~~~~~n~~~c~~p 217 (580)
.+....+.++...|..|
T Consensus 150 ~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 150 WLRKKSLNGGAARCGAP 166 (192)
T ss_dssp HHHHHCCSGGGCBBCSS
T ss_pred HHHHcCCCCCCCCCCCC
Confidence 23333444555566554
No 364
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=1.6e-19 Score=173.83 Aligned_cols=137 Identities=21% Similarity=0.275 Sum_probs=106.0
Q ss_pred CCcCceeccccCceEEEEEe-CCCCE--EEEEEEeccccc------------------------hhhhHHHHHHHHhhcC
Q 038098 294 FSENNLIGRGGFGSVYKARI-QDGME--VAVKVFDLQYGR------------------------AFKSFDIECDMIKRIR 346 (580)
Q Consensus 294 ~~~~~~lg~G~~g~v~~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~e~~~l~~l~ 346 (580)
|.+.+.||+|+||.||+|.. .+|+. ||||++...... ....+..|+.++.++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999987 67989 999987432110 1135788999999998
Q ss_pred CCCc--ceEEeeeecCCceeeEeeccCC-C----ChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCC
Q 038098 347 HRNI--IKIISSCSSDDFKALVLEYMPH-G----SLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLK 419 (580)
Q Consensus 347 h~ni--v~~~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk 419 (580)
|+++ ..++++ +..++||||+.+ | +|.++... .++..+..++.|++.|+.|||. +.+|+|||||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~givHrDlk 198 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELVHADLS 198 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSCS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCCC
Confidence 8764 444443 356899999942 3 67765432 2344677899999999999994 4689999999
Q ss_pred CCCEEeCCCCcEEEccccCcccc
Q 038098 420 PSNVLLDDNMVAHLSDFGMAKPL 442 (580)
Q Consensus 420 ~~Nill~~~~~~kl~Dfg~a~~~ 442 (580)
|+|||++. .++|+|||+|...
T Consensus 199 p~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEET
T ss_pred HHHEEEcC--cEEEEECcccccC
Confidence 99999998 9999999999754
No 365
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.77 E-value=1.6e-18 Score=159.08 Aligned_cols=175 Identities=25% Similarity=0.313 Sum_probs=127.4
Q ss_pred CEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCc-cccCCCCCcEEEcCCCCCCCC-CCCCcCCCCCceEeCcC
Q 038098 19 QLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPA-CFGNLTNLRNLYLGSNKLTSI-PSTLWNLKDILYLDLSS 96 (580)
Q Consensus 19 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~l~~N~l~~l-p~~~~~l~~L~~L~l~~ 96 (580)
++|++++|.++ .+|..+.. +|++|+|++|+|+++.+. .|..+++|++|+|++|+|+.+ |..+.++++|
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L------- 80 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHI------- 80 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTC-------
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccC-------
Confidence 78999999997 67766653 899999999999977765 599999999999999999997 4566665555
Q ss_pred CcccccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccccccccccccCCCcccccccc
Q 038098 97 NFLLIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKL 176 (580)
Q Consensus 97 n~l~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 176 (580)
+.|+|++|+|+++.+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|.+++..+.. .-.
T Consensus 81 -----------~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~-~~~ 148 (192)
T 1w8a_A 81 -----------QELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLA-WFA 148 (192)
T ss_dssp -----------CEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGH-HHH
T ss_pred -----------CEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcch-HHH
Confidence 55555666666677777888888888888888888777888888888888888888888654321 011
Q ss_pred CcccEEEccCCcccCCCCCCCCCccCccccCCCCccccCCC
Q 038098 177 LDLKDINVSFNKLEGEIPNKGPFRNFSTESFEGNELLCGMP 217 (580)
Q Consensus 177 ~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~c~~p 217 (580)
..++...+.++...|..|.. +......++..+.+.|..+
T Consensus 149 ~~l~~~~~~~~~~~C~~P~~--l~~~~l~~l~~~~~~C~~~ 187 (192)
T 1w8a_A 149 EWLRKKSLNGGAARCGAPSK--VRDVQIKDLPHSEFKCSSE 187 (192)
T ss_dssp HHHHHHCCSGGGCBBCSSTT--TTTSBGGGSCTTTCCCCCC
T ss_pred HHHHHcCCCCCCCCCCCChH--HcCCChhhCcHhhcCcCCC
Confidence 12333345556666555533 4444555666677777644
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=1.8e-21 Score=208.01 Aligned_cols=181 Identities=20% Similarity=0.228 Sum_probs=143.7
Q ss_pred cCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCc-------------CCcCCCccccCCCCCcEEE-cCCCCCC
Q 038098 12 VGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNK-------------LDGFVPACFGNLTNLRNLY-LGSNKLT 77 (580)
Q Consensus 12 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~~~~~~~l~~L~~L~-l~~N~l~ 77 (580)
+..+++|+.|+|++|.|+ .+|+.++++++|++|++++|. +.+..|..++++++|+.|+ ++.|.+.
T Consensus 345 ~~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~ 423 (567)
T 1dce_A 345 SATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD 423 (567)
T ss_dssp CSTTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH
T ss_pred cccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc
Confidence 367899999999999998 789999999999999998875 5566777888888888888 6666544
Q ss_pred CCCC------CCcC--CCCCceEeCcCCcc----cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccC
Q 038098 78 SIPS------TLWN--LKDILYLDLSSNFL----LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSI 145 (580)
Q Consensus 78 ~lp~------~~~~--l~~L~~L~l~~n~l----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 145 (580)
.++. .+.. ...|+.|+|++|+| .+..+++|+.|+|++|.|+ .+|..|+.+++|+.|+|++|.|++ +
T Consensus 424 ~L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~lp~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-l 501 (567)
T 1dce_A 424 DLRSKFLLENSVLKMEYADVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-V 501 (567)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEECTTSCCSSCCCGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-C
T ss_pred hhhhhhhhcccccccCccCceEEEecCCCCCCCcCccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-C
Confidence 3321 0111 12578888888887 3667778888888888888 457788888888888888888884 6
Q ss_pred CcccccccccccccccccccCCCc-cccccccCcccEEEccCCcccCCCCCC
Q 038098 146 PDSIGDLINLKSLNLSNNNLSGTI-PISLEKLLDLKDINVSFNKLEGEIPNK 196 (580)
Q Consensus 146 p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~l~l~~N~l~~~~~~~ 196 (580)
| .+..+++|+.|+|++|+|++.. |..+..+++|+.|++++|++++.++..
T Consensus 502 p-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 502 D-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp G-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred c-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 6 7888888888888888888766 888888888888888888888877654
No 367
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=7.8e-19 Score=193.53 Aligned_cols=154 Identities=24% Similarity=0.243 Sum_probs=100.6
Q ss_pred CCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCCcCCCCCceEeCcCCcc-----
Q 038098 25 DNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTLWNLKDILYLDLSSNFL----- 99 (580)
Q Consensus 25 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~~~l~~L~~L~l~~n~l----- 99 (580)
+|.+. ..|+.|..+++|+.|+|++|.|. .+|..+.++++|++|+|++|+|+.+|..+.++++|++|+|++|+|
T Consensus 210 ~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~lp~ 287 (727)
T 4b8c_D 210 ENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLTSLPA 287 (727)
T ss_dssp -------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCSCCCGGGGGGTTCCEEECTTSCCSSCCS
T ss_pred cccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCcccChhhhCCCCCCEEeCcCCcCCccCh
Confidence 34443 45667777777777777777777 445555577777777777777777777777777777777777776
Q ss_pred cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccc-cccccccccccCCCccccccccCc
Q 038098 100 LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLIN-LKSLNLSNNNLSGTIPISLEKLLD 178 (580)
Q Consensus 100 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~~~~~~~l~~ 178 (580)
.+.++++|+.|+|++|.|+. +|..|..+++|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|..
T Consensus 288 ~~~~l~~L~~L~L~~N~l~~-lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------ 360 (727)
T 4b8c_D 288 ELGSCFQLKYFYFFDNMVTT-LPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------ 360 (727)
T ss_dssp SGGGGTTCSEEECCSSCCCC-CCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC------
T ss_pred hhcCCCCCCEEECCCCCCCc-cChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------
Confidence 35667778888888888874 4666999999999999999999888887765433 345789999999887754
Q ss_pred ccEEEccCC
Q 038098 179 LKDINVSFN 187 (580)
Q Consensus 179 L~~l~l~~N 187 (580)
|+.|+++.|
T Consensus 361 l~~l~l~~n 369 (727)
T 4b8c_D 361 RRFIEINTD 369 (727)
T ss_dssp ---------
T ss_pred cceeEeecc
Confidence 455666666
No 368
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.74 E-value=2.8e-18 Score=157.39 Aligned_cols=130 Identities=27% Similarity=0.385 Sum_probs=79.3
Q ss_pred eeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCCcCCCCCceEeCcCCcccccCCCcccEEeCCCCcCCCCCCc
Q 038098 44 ELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTLWNLKDILYLDLSSNFLLIGNLKVLVQVDLSMNNFSDVIPT 123 (580)
Q Consensus 44 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~~~l~~L~~L~l~~n~l~~~~l~~L~~L~l~~N~l~~~~~~ 123 (580)
++++++|+|+. +|..+. ++|++|+|++|+|+.+|..+.+++ +|+.|+|++|.|+++.+.
T Consensus 14 ~l~~~~~~l~~-ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~------------------~L~~L~Ls~N~i~~i~~~ 72 (193)
T 2wfh_A 14 VVRCSNKGLKV-LPKGIP--RDVTELYLDGNQFTLVPKELSNYK------------------HLTLIDLSNNRISTLSNQ 72 (193)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCCEEECCSSCCCSCCGGGGGCT------------------TCCEEECCSSCCCCCCTT
T ss_pred EEEcCCCCCCc-CCCCCC--CCCCEEECCCCcCchhHHHhhccc------------------CCCEEECCCCcCCEeCHh
Confidence 45555555552 232221 355555555555555554333333 334444455555555556
Q ss_pred ccCCccccceeccccccccccCCcccccccccccccccccccCCCccccccccCcccEEEccCCcccCCCC
Q 038098 124 TIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIP 194 (580)
Q Consensus 124 ~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 194 (580)
.|.++++|+.|+|++|.|++..|..|..+++|+.|+|++|+|+...+..|..+++|+.|++++|++.|.+.
T Consensus 73 ~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 73 SFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp TTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred HccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 66666777777777777776656667777777777777777775555567777788888888888877664
No 369
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=2.3e-18 Score=158.70 Aligned_cols=152 Identities=18% Similarity=0.245 Sum_probs=114.5
Q ss_pred hCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCCcCCCCCceEeCcCCcccccCCCcccEEeCCCCc
Q 038098 37 CRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTLWNLKDILYLDLSSNFLLIGNLKVLVQVDLSMNN 116 (580)
Q Consensus 37 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~~~l~~L~~L~l~~n~l~~~~l~~L~~L~l~~N~ 116 (580)
..+++|++|++++|.|+. +| .+..+++|++|++++|.++.++ .+..+++|+.|++++|.
T Consensus 41 ~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~~~~-------------------~l~~l~~L~~L~l~~n~ 99 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHATNYN-------------------PISGLSNLERLRIMGKD 99 (197)
T ss_dssp HHHHTCCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCSCCG-------------------GGTTCTTCCEEEEECTT
T ss_pred hhcCCccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCCcch-------------------hhhcCCCCCEEEeECCc
Confidence 344555555555555552 22 3555555555555555544432 24456677888888888
Q ss_pred CCCCCCcccCCccccceeccccccccccCCcccccccccccccccccc-cCCCccccccccCcccEEEccCCcccCCCCC
Q 038098 117 FSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNN-LSGTIPISLEKLLDLKDINVSFNKLEGEIPN 195 (580)
Q Consensus 117 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 195 (580)
+++..+..|..+++|+.|+|++|.+++..|..+..+++|+.|+|++|. ++ .+| .+..+++|+.|++++|+++... .
T Consensus 100 l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~-~ 176 (197)
T 4ezg_A 100 VTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYR-G 176 (197)
T ss_dssp CBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCT-T
T ss_pred cCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChH-H
Confidence 887778889999999999999999998888999999999999999998 76 555 6899999999999999999855 5
Q ss_pred CCCCccCccccCCCCcc
Q 038098 196 KGPFRNFSTESFEGNEL 212 (580)
Q Consensus 196 ~~~~~~l~~~~~~~n~~ 212 (580)
...+++++.+++.+|+.
T Consensus 177 l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 177 IEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp GGGCSSCCEEEECBC--
T ss_pred hccCCCCCEEEeeCccc
Confidence 66788888899988874
No 370
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.72 E-value=1.9e-19 Score=189.10 Aligned_cols=212 Identities=16% Similarity=0.116 Sum_probs=138.1
Q ss_pred CCccccC----CCcccCCCCCCCEEeccCCcCCCCCchhhh-----CCCCCceeeCCCCcCCcC----CCccccCCCCCc
Q 038098 1 GNNLNGS----IPIAVGKLQKLQLLSLEDNQLEGSIPDDLC-----RLAALFELDSGGNKLDGF----VPACFGNLTNLR 67 (580)
Q Consensus 1 ~N~~~~~----~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~ 67 (580)
+|++++. ++..|..+++|++|+|++|.++...+..+. .+++|++|+|++|.++.. ++..+..+++|+
T Consensus 151 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~ 230 (461)
T 1z7x_W 151 YCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLR 230 (461)
T ss_dssp TSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCC
T ss_pred CCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCcc
Confidence 3556653 355666778888888888887654444443 256888888888887753 355667778888
Q ss_pred EEEcCCCCCCCC-----CC-CCcCCCCCceEeCcCCccc----------ccCCCcccEEeCCCCcCCCCCCcccCC----
Q 038098 68 NLYLGSNKLTSI-----PS-TLWNLKDILYLDLSSNFLL----------IGNLKVLVQVDLSMNNFSDVIPTTIGG---- 127 (580)
Q Consensus 68 ~L~l~~N~l~~l-----p~-~~~~l~~L~~L~l~~n~l~----------~~~l~~L~~L~l~~N~l~~~~~~~~~~---- 127 (580)
+|+|++|+++.. +. .+..+++|++|+|++|.+. +..+++|+.|++++|.++...+..+..
T Consensus 231 ~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~ 310 (461)
T 1z7x_W 231 ELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLE 310 (461)
T ss_dssp EEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTS
T ss_pred EEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhcc
Confidence 888888877652 12 2234677888888888762 334677888888888776543333332
Q ss_pred -ccccceecccccccccc----CCcccccccccccccccccccCCCccccccc-----cCcccEEEccCCcccC----C-
Q 038098 128 -LKDLQYLFLEYNRLQGS----IPDSIGDLINLKSLNLSNNNLSGTIPISLEK-----LLDLKDINVSFNKLEG----E- 192 (580)
Q Consensus 128 -l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-----l~~L~~l~l~~N~l~~----~- 192 (580)
.++|+.|+|++|.+++. ++..+..+++|+.|+|++|.+++..+..+.. .++|+.|++++|+++. .
T Consensus 311 ~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l 390 (461)
T 1z7x_W 311 PGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSL 390 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHH
T ss_pred CCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHH
Confidence 25777888888877754 3555666677888888888777554444432 5677788888887773 2
Q ss_pred CCCCCCCccCccccCCCCcc
Q 038098 193 IPNKGPFRNFSTESFEGNEL 212 (580)
Q Consensus 193 ~~~~~~~~~l~~~~~~~n~~ 212 (580)
+.....++++..+++.+|+.
T Consensus 391 ~~~l~~~~~L~~L~l~~N~i 410 (461)
T 1z7x_W 391 AATLLANHSLRELDLSNNCL 410 (461)
T ss_dssp HHHHHHCCCCCEEECCSSSC
T ss_pred HHHHHhCCCccEEECCCCCC
Confidence 22223456667777777754
No 371
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.72 E-value=4.5e-20 Score=193.90 Aligned_cols=200 Identities=18% Similarity=0.111 Sum_probs=159.2
Q ss_pred CCCCCCEEeccCCcCCCC----CchhhhCCCCCceeeCCCCcCCcCCCcccc-----CCCCCcEEEcCCCCCCC-----C
Q 038098 14 KLQKLQLLSLEDNQLEGS----IPDDLCRLAALFELDSGGNKLDGFVPACFG-----NLTNLRNLYLGSNKLTS-----I 79 (580)
Q Consensus 14 ~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~l~~N~l~~-----l 79 (580)
..++|++|+|++|.++.. ++..+..+++|++|+|++|.++...+..+. ..++|++|+|++|+++. +
T Consensus 140 ~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 219 (461)
T 1z7x_W 140 PQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDL 219 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHH
T ss_pred CCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHH
Confidence 367899999999999864 366778889999999999999865444443 36799999999999987 5
Q ss_pred CCCCcCCCCCceEeCcCCccc-----------ccCCCcccEEeCCCCcCCCC----CCcccCCccccceecccccccccc
Q 038098 80 PSTLWNLKDILYLDLSSNFLL-----------IGNLKVLVQVDLSMNNFSDV----IPTTIGGLKDLQYLFLEYNRLQGS 144 (580)
Q Consensus 80 p~~~~~l~~L~~L~l~~n~l~-----------~~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~ 144 (580)
+..+..+++|++|+|++|.+. +..+++|+.|++++|.++.. .+..+..+++|+.|+|++|.+++.
T Consensus 220 ~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~ 299 (461)
T 1z7x_W 220 CGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDE 299 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHH
T ss_pred HHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchH
Confidence 666778899999999999982 23588999999999999864 456677789999999999999865
Q ss_pred CCcccccc-----cccccccccccccCCC----ccccccccCcccEEEccCCcccCCCCCC------CCCccCccccCCC
Q 038098 145 IPDSIGDL-----INLKSLNLSNNNLSGT----IPISLEKLLDLKDINVSFNKLEGEIPNK------GPFRNFSTESFEG 209 (580)
Q Consensus 145 ~p~~~~~l-----~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~l~l~~N~l~~~~~~~------~~~~~l~~~~~~~ 209 (580)
.+..+... ++|+.|+|++|.+++. ++..+..+++|+.|++++|+++...+.. ...+.++.+++.+
T Consensus 300 ~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~ 379 (461)
T 1z7x_W 300 GARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLAD 379 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred HHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCC
Confidence 55444432 6999999999999965 4666778899999999999998653221 1145788888888
Q ss_pred Cccc
Q 038098 210 NELL 213 (580)
Q Consensus 210 n~~~ 213 (580)
|...
T Consensus 380 n~i~ 383 (461)
T 1z7x_W 380 CDVS 383 (461)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 8653
No 372
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.72 E-value=5.1e-20 Score=196.84 Aligned_cols=179 Identities=26% Similarity=0.228 Sum_probs=145.6
Q ss_pred CccccCCCcccCCCCCCCEEeccCCc-------------CCCCCchhhhCCCCCceee-CCCCcCCcCCCc-----cccC
Q 038098 2 NNLNGSIPIAVGKLQKLQLLSLEDNQ-------------LEGSIPDDLCRLAALFELD-SGGNKLDGFVPA-----CFGN 62 (580)
Q Consensus 2 N~~~~~~p~~~~~l~~L~~L~L~~n~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~~~~~-----~~~~ 62 (580)
|+|+ .+|+++++|++|+.|++++|. +.+..|+.++.+++|+.|+ ++.|.+..+..- .+..
T Consensus 359 n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L~~l~l~~n~i~~ 437 (567)
T 1dce_A 359 EKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLK 437 (567)
T ss_dssp HHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred hhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchhhhhhhhcccccc
Confidence 4444 679999999999999998775 5567888889999999998 666654321110 0111
Q ss_pred --CCCCcEEEcCCCCCCCCCCCCcCCCCCceEeCcCCcc-----cccCCCcccEEeCCCCcCCCCCCcccCCccccceec
Q 038098 63 --LTNLRNLYLGSNKLTSIPSTLWNLKDILYLDLSSNFL-----LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLF 135 (580)
Q Consensus 63 --l~~L~~L~l~~N~l~~lp~~~~~l~~L~~L~l~~n~l-----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 135 (580)
...|+.|+|++|+|+.+|. +..+++|+.|+|++|+| .+.++++|+.|+|++|.|+++ | .|..+++|+.|+
T Consensus 438 l~~~~L~~L~Ls~n~l~~lp~-~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~l-p-~l~~l~~L~~L~ 514 (567)
T 1dce_A 438 MEYADVRVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENV-D-GVANLPRLQELL 514 (567)
T ss_dssp HHHTTCSEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCC-G-GGTTCSSCCEEE
T ss_pred cCccCceEEEecCCCCCCCcC-ccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCCCC-c-ccCCCCCCcEEE
Confidence 1358999999999999987 88999999999999998 377899999999999999985 5 899999999999
Q ss_pred cccccccccC-CcccccccccccccccccccCCCcccc---ccccCcccEEEc
Q 038098 136 LEYNRLQGSI-PDSIGDLINLKSLNLSNNNLSGTIPIS---LEKLLDLKDINV 184 (580)
Q Consensus 136 l~~n~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~~~~---~~~l~~L~~l~l 184 (580)
|++|+|++.. |..+..+++|+.|+|++|++++.+|.. +..+++|+.|++
T Consensus 515 Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 515 LCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 9999999776 999999999999999999999665532 334788998864
No 373
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.71 E-value=1.9e-17 Score=148.49 Aligned_cols=137 Identities=18% Similarity=0.147 Sum_probs=103.1
Q ss_pred CCCCCCEEeccCCcCC-CCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCC-CCCCCcCCCCCce
Q 038098 14 KLQKLQLLSLEDNQLE-GSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTS-IPSTLWNLKDILY 91 (580)
Q Consensus 14 ~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-lp~~~~~l~~L~~ 91 (580)
..++|++|+|++|.++ +.+|..+..+++|++|+|++|.|+++ ..|..+++|++|+|++|+++. +|..+..+++|
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L-- 97 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNL-- 97 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTC--
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCC--
Confidence 4478888888888887 56777788888888888888888865 678888888888888888887 44433334444
Q ss_pred EeCcCCcccccCCCcccEEeCCCCcCCCCCC-cccCCccccceeccccccccccCC---cccccccccccccccccccCC
Q 038098 92 LDLSSNFLLIGNLKVLVQVDLSMNNFSDVIP-TTIGGLKDLQYLFLEYNRLQGSIP---DSIGDLINLKSLNLSNNNLSG 167 (580)
Q Consensus 92 L~l~~n~l~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~p---~~~~~l~~L~~L~l~~N~l~~ 167 (580)
+.|++++|.++++.. ..+..+++|+.|++++|.+++..+ ..+..+++|+.|++++|.+.
T Consensus 98 ----------------~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~- 160 (168)
T 2ell_A 98 ----------------THLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ- 160 (168)
T ss_dssp ----------------CEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-
T ss_pred ----------------CEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-
Confidence 566666666665432 678888889999999999885444 37888889999999999887
Q ss_pred Cccc
Q 038098 168 TIPI 171 (580)
Q Consensus 168 ~~~~ 171 (580)
..|.
T Consensus 161 ~~~~ 164 (168)
T 2ell_A 161 EAPD 164 (168)
T ss_dssp BCCS
T ss_pred hccc
Confidence 4443
No 374
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.69 E-value=5.2e-18 Score=186.95 Aligned_cols=177 Identities=22% Similarity=0.214 Sum_probs=120.3
Q ss_pred CCCCEEeccCCcCCCCCchhhhCCCCC-----ceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCCcCCCCCc
Q 038098 16 QKLQLLSLEDNQLEGSIPDDLCRLAAL-----FELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTLWNLKDIL 90 (580)
Q Consensus 16 ~~L~~L~L~~n~l~~~~p~~~~~l~~L-----~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~~~l~~L~ 90 (580)
+.+++|+|.+|.+.. .+..+.....| ..++++.|.+. ..+..|..+++|+.|+|++|+|..+|..++.+++|+
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~ 250 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLT 250 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCSCCCGGGGGCCSCS
T ss_pred CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCCCCChhhcCCCCCC
Confidence 568899999999984 44433222222 23445555555 668889999999999999999999999999999999
Q ss_pred eEeCcCCcc-----cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCccccccccccccccccccc
Q 038098 91 YLDLSSNFL-----LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNL 165 (580)
Q Consensus 91 ~L~l~~n~l-----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l 165 (580)
+|+|++|.| .+.++++|+.|+|++|.|+ .+|..|..+++|+.|+|++|.|+ .+|..|..+++|+.|+|++|.|
T Consensus 251 ~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l 328 (727)
T 4b8c_D 251 RLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPL 328 (727)
T ss_dssp CCBCTTSCCSCCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCC
T ss_pred EEEeeCCcCcccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCcc
Confidence 999999998 3778999999999999999 55888999999999999999998 8888899999999999999999
Q ss_pred CCCccccccccCc-ccEEEccCCcccCCCCCC
Q 038098 166 SGTIPISLEKLLD-LKDINVSFNKLEGEIPNK 196 (580)
Q Consensus 166 ~~~~~~~~~~l~~-L~~l~l~~N~l~~~~~~~ 196 (580)
++.+|..+..+.. +..+++++|.+++.+|..
T Consensus 329 ~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~ 360 (727)
T 4b8c_D 329 EKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE 360 (727)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_pred CCCChHHHhhcchhhhHHhhccCcccCcCccc
Confidence 9988888866533 234789999999988764
No 375
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.68 E-value=1.9e-17 Score=165.32 Aligned_cols=134 Identities=16% Similarity=0.180 Sum_probs=97.7
Q ss_pred CCcCceeccccCceEEEEEeCCCCEEEEEEEecccc--------------chhhh--------HHHHHHHHhhcCCCCcc
Q 038098 294 FSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYG--------------RAFKS--------FDIECDMIKRIRHRNII 351 (580)
Q Consensus 294 ~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~--------------~~~~~--------~~~e~~~l~~l~h~niv 351 (580)
|++.+.||+|++|.||+|...+|+.||||+++.... ..... ...|...+.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 888999999999999999988999999999753210 00111 12355555555433322
Q ss_pred --eEEeeeecCCceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCC
Q 038098 352 --KIISSCSSDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM 429 (580)
Q Consensus 352 --~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~ 429 (580)
..+++ ...++||||++|++|.++... .....++.||+.++.||| ..|||||||||.|||+++++
T Consensus 177 vp~p~~~----~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 177 VPEPIAQ----SRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIREEK 242 (397)
T ss_dssp CCCEEEE----ETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEEEE
T ss_pred CCeeeec----cCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeCCC
Confidence 22222 123799999999888764321 224568899999999999 89999999999999998776
Q ss_pred ----------cEEEccccCccc
Q 038098 430 ----------VAHLSDFGMAKP 441 (580)
Q Consensus 430 ----------~~kl~Dfg~a~~ 441 (580)
.+.|+||+-+..
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEE
T ss_pred CcccccccccceEEEEeCCccc
Confidence 389999997764
No 376
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=4.6e-17 Score=145.87 Aligned_cols=137 Identities=25% Similarity=0.169 Sum_probs=109.7
Q ss_pred CCCCceeeCCCCcCC-cCCCccccCCCCCcEEEcCCCCCCCCCCCCcCCCCCceEeCcCCcccccCCCcccEEeCCCCcC
Q 038098 39 LAALFELDSGGNKLD-GFVPACFGNLTNLRNLYLGSNKLTSIPSTLWNLKDILYLDLSSNFLLIGNLKVLVQVDLSMNNF 117 (580)
Q Consensus 39 l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~~~l~~L~~L~l~~n~l~~~~l~~L~~L~l~~N~l 117 (580)
.++|++|+|++|.++ +.+|..+..+++|++|+|++|+|+.+ ..+..+ ++|+.|++++|.+
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l------------------~~L~~L~Ls~N~l 83 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKL------------------PKLKKLELSENRI 83 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCC------------------SSCCEEEEESCCC
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccC------------------CCCCEEECcCCcC
Confidence 367888888888887 56677778888888888888888877 444444 4556666666777
Q ss_pred CCCCCcccCCccccceeccccccccccC-CcccccccccccccccccccCCCcc---ccccccCcccEEEccCCcccCCC
Q 038098 118 SDVIPTTIGGLKDLQYLFLEYNRLQGSI-PDSIGDLINLKSLNLSNNNLSGTIP---ISLEKLLDLKDINVSFNKLEGEI 193 (580)
Q Consensus 118 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~~---~~~~~l~~L~~l~l~~N~l~~~~ 193 (580)
++.+|..+..+++|+.|+|++|.+++.. +..+..+++|+.|++++|.+++..+ ..+..+++|+.|++++|.+...+
T Consensus 84 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 163 (168)
T 2ell_A 84 FGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAP 163 (168)
T ss_dssp CSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCC
T ss_pred chHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhcc
Confidence 7667777878999999999999999532 2789999999999999999996655 48899999999999999987665
Q ss_pred C
Q 038098 194 P 194 (580)
Q Consensus 194 ~ 194 (580)
.
T Consensus 164 ~ 164 (168)
T 2ell_A 164 D 164 (168)
T ss_dssp S
T ss_pred c
Confidence 4
No 377
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=1.9e-16 Score=143.16 Aligned_cols=135 Identities=26% Similarity=0.333 Sum_probs=105.5
Q ss_pred CceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCCcCCCCCceEeCcCCcccccCCCcccEEeCCCCcCCCCC
Q 038098 42 LFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTLWNLKDILYLDLSSNFLLIGNLKVLVQVDLSMNNFSDVI 121 (580)
Q Consensus 42 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~~~l~~L~~L~l~~n~l~~~~l~~L~~L~l~~N~l~~~~ 121 (580)
.+.+++++|+++.+ |..+ .++|++|++++|+++.+|... +..+++|+.|++++|.+++++
T Consensus 9 ~~~l~~~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~-----------------~~~l~~L~~L~l~~n~l~~~~ 68 (177)
T 2o6r_A 9 GTEIRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLPHGV-----------------FDKLTQLTKLSLSQNQIQSLP 68 (177)
T ss_dssp TTEEECCSSCCSSC-CTTC--CTTCSEEECCSSCCCCCCTTT-----------------TTTCTTCSEEECCSSCCCCCC
T ss_pred CCEEEecCCCCccC-CCCC--CCCCcEEEeCCCcccEeCHHH-----------------hcCcccccEEECCCCcceEeC
Confidence 56788888888844 4333 267888888888888776543 123455567777777777777
Q ss_pred CcccCCccccceeccccccccccCCcccccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCC
Q 038098 122 PTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNK 196 (580)
Q Consensus 122 ~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 196 (580)
+..|..+++|+.|+|++|.|++..+..|..+++|+.|+|++|++++..+..+..+++|+.|++++|++++.++..
T Consensus 69 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l 143 (177)
T 2o6r_A 69 DGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 143 (177)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHHH
T ss_pred hhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCccH
Confidence 777889999999999999999766777888999999999999999776767788999999999999999887643
No 378
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=2.9e-16 Score=143.91 Aligned_cols=127 Identities=25% Similarity=0.392 Sum_probs=104.0
Q ss_pred CEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCC-CCcCCCCCceEeCcCC
Q 038098 19 QLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPS-TLWNLKDILYLDLSSN 97 (580)
Q Consensus 19 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~-~~~~l~~L~~L~l~~n 97 (580)
+++++++|.++ .+|..+. ++|++|+|++|.|+ .+|..|.++++|++|+|++|+|+.++. .|.++++
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~--------- 79 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQ--------- 79 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTT---------
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCC---------
Confidence 68999999998 5666554 58999999999999 567899999999999999999999875 4545544
Q ss_pred cccccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccccccccccccCC
Q 038098 98 FLLIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSG 167 (580)
Q Consensus 98 ~l~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 167 (580)
|+.|+|++|.|+++.+..|..+++|+.|+|++|.|+...+..|..+++|+.|+|++|.+..
T Consensus 80 ---------L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 80 ---------LLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp ---------CCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ---------CCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 4666666677777777888888999999999999986556678888999999999998874
No 379
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=3.8e-16 Score=141.15 Aligned_cols=133 Identities=23% Similarity=0.316 Sum_probs=106.1
Q ss_pred CCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCC-CcCCCCCceEeCc
Q 038098 17 KLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPST-LWNLKDILYLDLS 95 (580)
Q Consensus 17 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~-~~~l~~L~~L~l~ 95 (580)
+.+.+++++|+++ .+|..+. ++|++|+|++|+++++.+..|.++++|++|+|++|+|+.+|.. +..+++
T Consensus 8 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~------- 77 (177)
T 2o6r_A 8 SGTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTK------- 77 (177)
T ss_dssp ETTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTT-------
T ss_pred CCCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCc-------
Confidence 3578999999998 4555443 6899999999999988888899999999999999999998764 344444
Q ss_pred CCcccccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccccccccccccCCCcc
Q 038098 96 SNFLLIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIP 170 (580)
Q Consensus 96 ~n~l~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 170 (580)
|+.|++++|.+++.++..|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|.+.+..|
T Consensus 78 -----------L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 78 -----------LTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp -----------CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred -----------cCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 4666666666777777778888889999999998886555567788889999999998886544
No 380
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=5.5e-17 Score=142.23 Aligned_cols=129 Identities=19% Similarity=0.171 Sum_probs=97.0
Q ss_pred CCCCCCEEeccCCcCC-CCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCC-CCCCCcCCCCCce
Q 038098 14 KLQKLQLLSLEDNQLE-GSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTS-IPSTLWNLKDILY 91 (580)
Q Consensus 14 ~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-lp~~~~~l~~L~~ 91 (580)
..++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..|..+++|++|+|++|+|+. +|..+..++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~---- 88 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCP---- 88 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCT----
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCC----
Confidence 3477888888888887 56777778888888888888888865 678888888888888888887 554443344
Q ss_pred EeCcCCcccccCCCcccEEeCCCCcCCCCC-CcccCCccccceeccccccccccCC---cccccccccccccccc
Q 038098 92 LDLSSNFLLIGNLKVLVQVDLSMNNFSDVI-PTTIGGLKDLQYLFLEYNRLQGSIP---DSIGDLINLKSLNLSN 162 (580)
Q Consensus 92 L~l~~n~l~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~p---~~~~~l~~L~~L~l~~ 162 (580)
+|+.|++++|.+++.. +..+..+++|+.|++++|.+++..+ ..+..+++|+.|++++
T Consensus 89 --------------~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 89 --------------NLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp --------------TCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred --------------CCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 4566666666666542 4678888899999999999885554 4688888999988864
No 381
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.66 E-value=1.9e-16 Score=158.26 Aligned_cols=179 Identities=15% Similarity=0.117 Sum_probs=150.9
Q ss_pred CCCCCEEeccCCcCC--------------------CCCchhhhC--------CCCCceeeCCCCcCCcCCCccccCCCCC
Q 038098 15 LQKLQLLSLEDNQLE--------------------GSIPDDLCR--------LAALFELDSGGNKLDGFVPACFGNLTNL 66 (580)
Q Consensus 15 l~~L~~L~L~~n~l~--------------------~~~p~~~~~--------l~~L~~L~L~~N~l~~~~~~~~~~l~~L 66 (580)
+++|++|||++|+|. .+.+.+|.+ +++|++|+|.+ .++.+.+.+|.++++|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L 126 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNL 126 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCccc
Confidence 788999999999998 334567788 99999999999 8888888999999999
Q ss_pred cEEEcCCCCCCCCCC-CCcCCCCCceEeCcCCcc----------cc----------------------------------
Q 038098 67 RNLYLGSNKLTSIPS-TLWNLKDILYLDLSSNFL----------LI---------------------------------- 101 (580)
Q Consensus 67 ~~L~l~~N~l~~lp~-~~~~l~~L~~L~l~~n~l----------~~---------------------------------- 101 (580)
+.|++++|.++.++. .|.++.++..+.++.+.. .+
T Consensus 127 ~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~ 206 (329)
T 3sb4_A 127 KICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINF 206 (329)
T ss_dssp CEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSE
T ss_pred ceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccce
Confidence 999999999988775 455677777777665221 00
Q ss_pred ----------------cCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccc-cccccccc
Q 038098 102 ----------------GNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLK-SLNLSNNN 164 (580)
Q Consensus 102 ----------------~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~-~L~l~~N~ 164 (580)
..+++|+.|+|++|.++.+.+.+|.++++|+.|+|++| ++...+.+|.++.+|+ .|++.+ .
T Consensus 207 l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~ 284 (329)
T 3sb4_A 207 LTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-S 284 (329)
T ss_dssp EEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-T
T ss_pred EEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-c
Confidence 12789999999999999999999999999999999998 7767778899999999 999999 7
Q ss_pred cCCCccccccccCcccEEEccCCcccCCCCCC
Q 038098 165 LSGTIPISLEKLLDLKDINVSFNKLEGEIPNK 196 (580)
Q Consensus 165 l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 196 (580)
++.+.+..|..+++|+.+++++|.++.+.+..
T Consensus 285 l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~a 316 (329)
T 3sb4_A 285 VTAIEFGAFMGCDNLRYVLATGDKITTLGDEL 316 (329)
T ss_dssp CCEECTTTTTTCTTEEEEEECSSCCCEECTTT
T ss_pred ceEEchhhhhCCccCCEEEeCCCccCccchhh
Confidence 77677899999999999999999998776643
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=1.4e-16 Score=139.55 Aligned_cols=129 Identities=23% Similarity=0.179 Sum_probs=105.3
Q ss_pred CCCCceeeCCCCcCC-cCCCccccCCCCCcEEEcCCCCCCCCCCCCcCCCCCceEeCcCCcccccCCCcccEEeCCCCcC
Q 038098 39 LAALFELDSGGNKLD-GFVPACFGNLTNLRNLYLGSNKLTSIPSTLWNLKDILYLDLSSNFLLIGNLKVLVQVDLSMNNF 117 (580)
Q Consensus 39 l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~~~l~~L~~L~l~~n~l~~~~l~~L~~L~l~~N~l 117 (580)
.++|++|++++|.++ +.+|..+..+++|++|+|++|+|+.+ ..+.. +++|+.|++++|.+
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~------------------l~~L~~L~Ls~n~i 76 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPK------------------LNKLKKLELSDNRV 76 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCC------------------CTTCCEEECCSSCC
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhc------------------CCCCCEEECCCCcc
Confidence 467899999999988 67778888899999999999998887 44444 44556777777777
Q ss_pred CCCCCcccCCccccceecccccccccc-CCcccccccccccccccccccCCCcc---ccccccCcccEEEccC
Q 038098 118 SDVIPTTIGGLKDLQYLFLEYNRLQGS-IPDSIGDLINLKSLNLSNNNLSGTIP---ISLEKLLDLKDINVSF 186 (580)
Q Consensus 118 ~~~~~~~~~~l~~L~~L~l~~n~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~~---~~~~~l~~L~~l~l~~ 186 (580)
++..|..+..+++|+.|++++|.+++. .+..+..+++|+.|++++|.+++..+ ..+..+++|+.|++++
T Consensus 77 ~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 77 SGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred cchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 776777888899999999999999853 34789999999999999999996655 5788999999998864
No 383
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.64 E-value=2.5e-16 Score=142.21 Aligned_cols=133 Identities=20% Similarity=0.270 Sum_probs=82.6
Q ss_pred ccCCCCCCCEEeccCCcCCCCCchhhhCCC-CCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCC-cCCCC
Q 038098 11 AVGKLQKLQLLSLEDNQLEGSIPDDLCRLA-ALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTL-WNLKD 88 (580)
Q Consensus 11 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~-~~l~~ 88 (580)
.+.++.+|+.|+|++|.++. +|. +..+. +|++|+|++|.|+++ ..|..+++|++|+|++|+|+.+|..+ ..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 45667777777777777773 444 33333 777777777777755 56777777777777777777766544 34444
Q ss_pred CceEeCcCCcccccCCCcccEEeCCCCcCCCCCC-cccCCccccceeccccccccccCCcc----ccccccccccccccc
Q 038098 89 ILYLDLSSNFLLIGNLKVLVQVDLSMNNFSDVIP-TTIGGLKDLQYLFLEYNRLQGSIPDS----IGDLINLKSLNLSNN 163 (580)
Q Consensus 89 L~~L~l~~n~l~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~p~~----~~~l~~L~~L~l~~N 163 (580)
| +.|++++|.++.+++ ..+..+++|+.|++++|.++ .+|.. +..+++|+.||+++|
T Consensus 90 L------------------~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n 150 (176)
T 1a9n_A 90 L------------------TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKV 150 (176)
T ss_dssp C------------------CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEEC
T ss_pred C------------------CEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcC
Confidence 4 444444444443221 25566666777777777766 44443 566666666666666
Q ss_pred ccC
Q 038098 164 NLS 166 (580)
Q Consensus 164 ~l~ 166 (580)
.+.
T Consensus 151 ~~~ 153 (176)
T 1a9n_A 151 KLK 153 (176)
T ss_dssp CHH
T ss_pred CHH
Confidence 654
No 384
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.63 E-value=1.5e-18 Score=160.20 Aligned_cols=156 Identities=23% Similarity=0.292 Sum_probs=110.3
Q ss_pred cCCCCCCCEEeccCCcCCCCCch------hhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCCcC
Q 038098 12 VGKLQKLQLLSLEDNQLEGSIPD------DLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTLWN 85 (580)
Q Consensus 12 ~~~l~~L~~L~L~~n~l~~~~p~------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~~~ 85 (580)
+.....++.++++.+.+.+..|. .|..+++|++|+|++|.|++ +| .+..+++|++|+|++|+|+.+|..+..
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~ 91 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAV 91 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhc
Confidence 34456677777777777766665 88888888888888888886 45 788888888888888888888765555
Q ss_pred CCCCceEeCcCCcccccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCC-cccccccccccccccccc
Q 038098 86 LKDILYLDLSSNFLLIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIP-DSIGDLINLKSLNLSNNN 164 (580)
Q Consensus 86 l~~L~~L~l~~n~l~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~l~~N~ 164 (580)
+++|++|+|+ +|.++++ | .+..+++|+.|+|++|.+++..+ ..+..+++|++|++++|.
T Consensus 92 ~~~L~~L~L~------------------~N~l~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~ 151 (198)
T 1ds9_A 92 ADTLEELWIS------------------YNQIASL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp HHHCSEEEEE------------------EEECCCH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCH
T ss_pred CCcCCEEECc------------------CCcCCcC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCc
Confidence 5555555554 4555543 2 46677778888888888774222 367777888888888888
Q ss_pred cCCCcccc----------ccccCcccEEEccCCcccC
Q 038098 165 LSGTIPIS----------LEKLLDLKDINVSFNKLEG 191 (580)
Q Consensus 165 l~~~~~~~----------~~~l~~L~~l~l~~N~l~~ 191 (580)
+++..|.. +..+++|+.|| +|+++.
T Consensus 152 l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 152 LYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred cccccccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 77655442 67788888776 677654
No 385
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.62 E-value=2.7e-16 Score=141.95 Aligned_cols=135 Identities=19% Similarity=0.178 Sum_probs=101.8
Q ss_pred hhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCCcCCCCCceEeCcCCcccccCCCcccEEeCCC
Q 038098 35 DLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTLWNLKDILYLDLSSNFLLIGNLKVLVQVDLSM 114 (580)
Q Consensus 35 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~~~l~~L~~L~l~~n~l~~~~l~~L~~L~l~~ 114 (580)
.+.++.+|++|+|++|+++.+ +......++|++|+|++|+|+.+ ..+. .+++|+.|++++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~~~-~~l~------------------~l~~L~~L~Ls~ 73 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL-DGFP------------------LLRRLKTLLVNN 73 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE-CCCC------------------CCSSCCEEECCS
T ss_pred hcCCcCCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCCcc-cccc------------------cCCCCCEEECCC
Confidence 345566777777777777743 44333334777777777777766 3343 455567777777
Q ss_pred CcCCCCCCcccCCccccceeccccccccccCCc--ccccccccccccccccccCCCcccc----ccccCcccEEEccCCc
Q 038098 115 NNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPD--SIGDLINLKSLNLSNNNLSGTIPIS----LEKLLDLKDINVSFNK 188 (580)
Q Consensus 115 N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~~~~----~~~l~~L~~l~l~~N~ 188 (580)
|.++++++..|..+++|+.|+|++|.|+ .+|. .+..+++|+.|++++|.++ ..|.. +..+++|+.||+++|.
T Consensus 74 N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~ 151 (176)
T 1a9n_A 74 NRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVK 151 (176)
T ss_dssp SCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECC
T ss_pred CcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCC
Confidence 7777776666788999999999999997 5665 7889999999999999998 55654 8899999999999998
Q ss_pred ccC
Q 038098 189 LEG 191 (580)
Q Consensus 189 l~~ 191 (580)
+..
T Consensus 152 ~~~ 154 (176)
T 1a9n_A 152 LKE 154 (176)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 386
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.60 E-value=4.9e-18 Score=156.71 Aligned_cols=139 Identities=22% Similarity=0.357 Sum_probs=115.3
Q ss_pred hhhCCCCCceeeCCCCcCCcCCCc------cccCCCCCcEEEcCCCCCCCCCCCCcCCCCCceEeCcCCcccccCCCccc
Q 038098 35 DLCRLAALFELDSGGNKLDGFVPA------CFGNLTNLRNLYLGSNKLTSIPSTLWNLKDILYLDLSSNFLLIGNLKVLV 108 (580)
Q Consensus 35 ~~~~l~~L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~l~~N~l~~lp~~~~~l~~L~~L~l~~n~l~~~~l~~L~ 108 (580)
.+.....++.++++.|.+++..|. .|..+++|++|+|++|+|+.+| .+..+++|++|+|++|.
T Consensus 13 ~~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l~-~~~~l~~L~~L~l~~n~---------- 81 (198)
T 1ds9_A 13 IFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNL---------- 81 (198)
T ss_dssp HHHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCCC-CHHHHTTCCEEEEEEEE----------
T ss_pred HHHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcccc-ccccCCCCCEEECCCCC----------
Confidence 356678899999999999988777 8999999999999999999988 66666666655555554
Q ss_pred EEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccccccccccccCCCcc-ccccccCcccEEEccCC
Q 038098 109 QVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIP-ISLEKLLDLKDINVSFN 187 (580)
Q Consensus 109 ~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~l~l~~N 187 (580)
++. .|..+..+++|+.|+|++|.+++ +| .+..+++|+.|+|++|++++..+ ..+..+++|+.|++++|
T Consensus 82 --------l~~-l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N 150 (198)
T 1ds9_A 82 --------IKK-IENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGN 150 (198)
T ss_dssp --------ECS-CSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSC
T ss_pred --------ccc-ccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCC
Confidence 443 35566778999999999999995 55 68899999999999999995433 57889999999999999
Q ss_pred cccCCCCC
Q 038098 188 KLEGEIPN 195 (580)
Q Consensus 188 ~l~~~~~~ 195 (580)
++++.+|.
T Consensus 151 ~l~~~~~~ 158 (198)
T 1ds9_A 151 PLYNDYKE 158 (198)
T ss_dssp HHHHHHHT
T ss_pred cccccccc
Confidence 99988765
No 387
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.57 E-value=7.1e-15 Score=131.66 Aligned_cols=111 Identities=20% Similarity=0.200 Sum_probs=82.2
Q ss_pred CcEEEcCCCCCCCCCCCCcCCCCCceEeCcCCcccccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccC
Q 038098 66 LRNLYLGSNKLTSIPSTLWNLKDILYLDLSSNFLLIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSI 145 (580)
Q Consensus 66 L~~L~l~~N~l~~lp~~~~~l~~L~~L~l~~n~l~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 145 (580)
.+.|++++|+|+.+|..+. + +|+.|+|++|.|+++.+..|..+++|+.|+|++|+|++..
T Consensus 11 ~~~l~~s~n~l~~ip~~~~--~------------------~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~ 70 (170)
T 3g39_A 11 GTTVDCSGKSLASVPTGIP--T------------------TTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLP 70 (170)
T ss_dssp TTEEECTTSCCSSCCSCCC--T------------------TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCC
T ss_pred CCEEEeCCCCcCccCccCC--C------------------CCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccC
Confidence 4677777777777776542 2 3456666666666777777778888888888888888666
Q ss_pred CcccccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCC
Q 038098 146 PDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNK 196 (580)
Q Consensus 146 p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 196 (580)
+..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|++++.++..
T Consensus 71 ~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~l 121 (170)
T 3g39_A 71 AGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDI 121 (170)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBGGG
T ss_pred hhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCchhH
Confidence 666778888888888888888666667888888888888888888877643
No 388
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.57 E-value=3.3e-15 Score=149.26 Aligned_cols=175 Identities=13% Similarity=0.079 Sum_probs=148.2
Q ss_pred CCCcccCC--------CCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCC--
Q 038098 7 SIPIAVGK--------LQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKL-- 76 (580)
Q Consensus 7 ~~p~~~~~--------l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l-- 76 (580)
+-+.+|.+ +++|+.|+|.+ +++.+.+.+|.++++|++|+|++|.+..+.+.+|.++.++..|.++.+..
T Consensus 84 I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~ 162 (329)
T 3sb4_A 84 VPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYR 162 (329)
T ss_dssp ECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHH
T ss_pred cCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhh
Confidence 33457778 99999999999 89878888999999999999999999989999999988888887766321
Q ss_pred --CCCCC-CC--------------------------------------------------cCCCCCceEeCcCCcc----
Q 038098 77 --TSIPS-TL--------------------------------------------------WNLKDILYLDLSSNFL---- 99 (580)
Q Consensus 77 --~~lp~-~~--------------------------------------------------~~l~~L~~L~l~~n~l---- 99 (580)
..+.. .+ ..+++|+.|+|++|++
T Consensus 163 ~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~ 242 (329)
T 3sb4_A 163 FKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIP 242 (329)
T ss_dssp TSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEEC
T ss_pred ccccccccccccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceec
Confidence 11110 00 0267999999999988
Q ss_pred --cccCCCcccEEeCCCCcCCCCCCcccCCccccc-eeccccccccccCCcccccccccccccccccccCCCcccccccc
Q 038098 100 --LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQ-YLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKL 176 (580)
Q Consensus 100 --~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~-~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 176 (580)
.|.++++|+.|+|++| ++.+.+.+|.++++|+ .|++++ .++...+..|.++++|+.|++++|.++...+..|.++
T Consensus 243 ~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~ 320 (329)
T 3sb4_A 243 DFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNG 320 (329)
T ss_dssp TTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTT
T ss_pred HhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCC
Confidence 5889999999999998 8888899999999999 999999 7776778999999999999999999997888899999
Q ss_pred CcccEEEc
Q 038098 177 LDLKDINV 184 (580)
Q Consensus 177 ~~L~~l~l 184 (580)
++|+.++.
T Consensus 321 ~~L~~ly~ 328 (329)
T 3sb4_A 321 VPSKLIYK 328 (329)
T ss_dssp CCCCEEEC
T ss_pred cchhhhcc
Confidence 99999874
No 389
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.54 E-value=1.9e-14 Score=129.27 Aligned_cols=110 Identities=21% Similarity=0.260 Sum_probs=75.5
Q ss_pred cEEEcCCCCCCCCCCCCcCCCCCceEeCcCCcccccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCC
Q 038098 67 RNLYLGSNKLTSIPSTLWNLKDILYLDLSSNFLLIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIP 146 (580)
Q Consensus 67 ~~L~l~~N~l~~lp~~~~~l~~L~~L~l~~n~l~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p 146 (580)
+.+++++|+|+.+|..+. + +|+.|+|++|+|+++.|..|..+++|+.|+|++|+|++..+
T Consensus 15 ~~l~~~~n~l~~iP~~~~--~------------------~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~ 74 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIP--T------------------DKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPT 74 (174)
T ss_dssp SEEECCSSCCSSCCSCCC--T------------------TCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred cEEEeCCCCCCccCCCcC--C------------------CCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccCh
Confidence 567777777777766442 2 33555566666666666777777777777777777775545
Q ss_pred cccccccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCC
Q 038098 147 DSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNK 196 (580)
Q Consensus 147 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 196 (580)
..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|++.+.++..
T Consensus 75 ~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~~ 124 (174)
T 2r9u_A 75 GVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCECRDI 124 (174)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCTTBGGG
T ss_pred hHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCcccccccH
Confidence 55677777777777777777655556777777888888888777776543
No 390
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.52 E-value=5.1e-14 Score=126.03 Aligned_cols=104 Identities=25% Similarity=0.330 Sum_probs=67.9
Q ss_pred CCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCC-cCCCCCceEeCcC
Q 038098 18 LQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTL-WNLKDILYLDLSS 96 (580)
Q Consensus 18 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~-~~l~~L~~L~l~~ 96 (580)
.+.|++++|.++ .+|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|+.+|... ..++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~--------- 78 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLT--------- 78 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCT---------
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCC---------
Confidence 467778888777 4555443 67777777777777777777777777777777777777776543 2333
Q ss_pred CcccccCCCcccEEeCCCCcCCCCCCcccCCccccceecccccccc
Q 038098 97 NFLLIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQ 142 (580)
Q Consensus 97 n~l~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~ 142 (580)
+|+.|+|++|+|+++++..|..+++|+.|+|++|.++
T Consensus 79 ---------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 79 ---------QLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp ---------TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ---------CCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 3355555555555555555666666666666666665
No 391
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.52 E-value=4.7e-14 Score=126.71 Aligned_cols=104 Identities=30% Similarity=0.458 Sum_probs=73.3
Q ss_pred CCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCCCC-cCCCCCceEeCcC
Q 038098 18 LQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPSTL-WNLKDILYLDLSS 96 (580)
Q Consensus 18 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~~~-~~l~~L~~L~l~~ 96 (580)
-+.+++++|.++ .+|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|+.+|... ..+++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~-------- 82 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQ-------- 82 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT--------
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcch--------
Confidence 367888888886 5665554 67888888888888777778888888888888888888877643 33443
Q ss_pred CcccccCCCcccEEeCCCCcCCCCCCcccCCccccceecccccccc
Q 038098 97 NFLLIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQ 142 (580)
Q Consensus 97 n~l~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~ 142 (580)
|+.|+|++|+|+++++..|..+++|+.|+|++|.+.
T Consensus 83 ----------L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 83 ----------LTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp ----------CCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ----------hhEEECCCCccceeCHHHhccccCCCEEEeCCCCcc
Confidence 355555555555555556777777777777777766
No 392
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.50 E-value=1.1e-13 Score=141.46 Aligned_cols=200 Identities=13% Similarity=0.087 Sum_probs=120.8
Q ss_pred CccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCC
Q 038098 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPS 81 (580)
Q Consensus 2 N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~ 81 (580)
++++.+-..+|.+. +|+.+.|.. .++.+.+.+|.++++|+.++|++|+++.+...+|. .++|+.+.|.+ .++.++.
T Consensus 144 ~~i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~-~l~~I~~ 219 (401)
T 4fdw_A 144 EGLKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPV-TLKEIGS 219 (401)
T ss_dssp TTCCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCT-TCCEECT
T ss_pred CCccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCC-chheehh
Confidence 34555556667663 577777765 56556666777777777777777777766666666 46777777763 3666654
Q ss_pred -CCcCCCCCceEeCcCCcc-----cccCCCcccEEeCCCCcCCCCCCcccCCccccceecccccccc-----ccCCcccc
Q 038098 82 -TLWNLKDILYLDLSSNFL-----LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQ-----GSIPDSIG 150 (580)
Q Consensus 82 -~~~~l~~L~~L~l~~n~l-----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~-----~~~p~~~~ 150 (580)
+|.++++|+.+++..|-- +|.+ .+|+.+.+ .|.++.+...+|.++++|+.+++.+|.+. ...+..|.
T Consensus 220 ~aF~~~~~L~~l~l~~~l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~ 297 (401)
T 4fdw_A 220 QAFLKTSQLKTIEIPENVSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLE 297 (401)
T ss_dssp TTTTTCTTCCCEECCTTCCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTT
T ss_pred hHhhCCCCCCEEecCCCccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhh
Confidence 455677777777765522 2444 56666666 34455556666666666776666666553 24445666
Q ss_pred cccccccccccccccCCCccccccccCcccEEEccCCcccCCCCCC-CCCccCccccCCCC
Q 038098 151 DLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLEGEIPNK-GPFRNFSTESFEGN 210 (580)
Q Consensus 151 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~~~~~~n 210 (580)
++++|+.++|.+ .++......|..+.+|+.+++..| ++.+.... ... +++.+.+.+|
T Consensus 298 ~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n 355 (401)
T 4fdw_A 298 GCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGT 355 (401)
T ss_dssp TCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCS
T ss_pred CCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCC
Confidence 666666666663 355455566666666666666443 44333322 222 4555555544
No 393
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.44 E-value=8e-13 Score=135.00 Aligned_cols=199 Identities=14% Similarity=0.102 Sum_probs=163.5
Q ss_pred CccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCC
Q 038098 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPS 81 (580)
Q Consensus 2 N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~ 81 (580)
|+++.+-+.+|.+. +|+.+.|..| ++.+...+|.+ .+|+.+.|.. .++.+.+.+|.++++|+.++|++|+++.++.
T Consensus 122 ~~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~ 197 (401)
T 4fdw_A 122 NSVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPA 197 (401)
T ss_dssp TTCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECT
T ss_pred CccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEech
Confidence 56777777899985 7999999887 77677788888 5799999996 7888888999999999999999999999998
Q ss_pred CCcCCCCCceEeCcCCcc-----cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccc
Q 038098 82 TLWNLKDILYLDLSSNFL-----LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLK 156 (580)
Q Consensus 82 ~~~~l~~L~~L~l~~n~l-----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 156 (580)
..+...+|+.+.|..+-- +|.++++|+.+++..| ++.+...+|.+ .+|+.+.| .|.++...+..|.++.+|+
T Consensus 198 ~aF~~~~L~~l~lp~~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~ 274 (401)
T 4fdw_A 198 STFVYAGIEEVLLPVTLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELA 274 (401)
T ss_dssp TTTTTCCCSEEECCTTCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCC
T ss_pred hhEeecccCEEEeCCchheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCC
Confidence 777789999999986622 5889999999999975 77788889988 78999999 4556656688999999999
Q ss_pred cccccccccC-----CCccccccccCcccEEEccCCcccCCCCCC-CCCccCccccCC
Q 038098 157 SLNLSNNNLS-----GTIPISLEKLLDLKDINVSFNKLEGEIPNK-GPFRNFSTESFE 208 (580)
Q Consensus 157 ~L~l~~N~l~-----~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~~~~~ 208 (580)
.+++.+|.+. ...+..|..+++|+.+++.+ .++.+.... ..+.+++.+.+.
T Consensus 275 ~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp 331 (401)
T 4fdw_A 275 EVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIP 331 (401)
T ss_dssp EEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEEC
T ss_pred EEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEEC
Confidence 9999998876 46678899999999999984 466554433 334555555553
No 394
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.42 E-value=1.8e-13 Score=137.76 Aligned_cols=59 Identities=25% Similarity=0.265 Sum_probs=28.9
Q ss_pred ccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccccccccccccC
Q 038098 107 LVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLS 166 (580)
Q Consensus 107 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~ 166 (580)
|+.|+|++|+|++++|..|.++++|+.|+|++|+|++..+..|..+. |+.|+|++|.+.
T Consensus 58 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 58 LRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 34444444444555555555555555555555555533333333332 555555555554
No 395
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.42 E-value=2.4e-15 Score=152.26 Aligned_cols=88 Identities=18% Similarity=0.201 Sum_probs=45.5
Q ss_pred CCcccEEeCCCCcCCCCC----CcccCCccccceecccccccccc----CCcccccccccccccccccccCCC----ccc
Q 038098 104 LKVLVQVDLSMNNFSDVI----PTTIGGLKDLQYLFLEYNRLQGS----IPDSIGDLINLKSLNLSNNNLSGT----IPI 171 (580)
Q Consensus 104 l~~L~~L~l~~N~l~~~~----~~~~~~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~~~ 171 (580)
.++|+.|+|++|.|+... +..+..+++|++|+|++|.|++. ++..+...++|+.|+|++|.|++. ++.
T Consensus 154 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~ 233 (372)
T 3un9_A 154 QCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALAR 233 (372)
T ss_dssp TCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHH
T ss_pred CCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHH
Confidence 445555555555554321 22234455566666666665532 233444455666666666666542 222
Q ss_pred cccccCcccEEEccCCcccC
Q 038098 172 SLEKLLDLKDINVSFNKLEG 191 (580)
Q Consensus 172 ~~~~l~~L~~l~l~~N~l~~ 191 (580)
.+...++|+.|++++|+|+.
T Consensus 234 ~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 234 AAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHCSSCCEEECTTSSCCH
T ss_pred HHHhCCCCCEEeccCCCCCH
Confidence 33344566666666666553
No 396
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.38 E-value=9.2e-13 Score=132.54 Aligned_cols=95 Identities=26% Similarity=0.194 Sum_probs=71.2
Q ss_pred ccccCCCcccCCCCCCCEEeccC-CcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCC
Q 038098 3 NLNGSIPIAVGKLQKLQLLSLED-NQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPS 81 (580)
Q Consensus 3 ~~~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~ 81 (580)
+|+ .+|. |..+++|++|+|++ |.|+++.++.|..|++|++|+|++|+|+++.|..|.++++|+.|+|++|+|+.+|.
T Consensus 20 ~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 97 (347)
T 2ifg_A 20 ALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSW 97 (347)
T ss_dssp CCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCS
T ss_pred CCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCH
Confidence 566 4666 88888888888885 88887777788888888888888888888878888888888888888888888876
Q ss_pred CCcCCCCCceEeCcCCcc
Q 038098 82 TLWNLKDILYLDLSSNFL 99 (580)
Q Consensus 82 ~~~~l~~L~~L~l~~n~l 99 (580)
.++...+|+.|+|++|.+
T Consensus 98 ~~~~~~~L~~l~l~~N~~ 115 (347)
T 2ifg_A 98 KTVQGLSLQELVLSGNPL 115 (347)
T ss_dssp TTTCSCCCCEEECCSSCC
T ss_pred HHcccCCceEEEeeCCCc
Confidence 655433365555555554
No 397
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.35 E-value=3.8e-12 Score=122.66 Aligned_cols=147 Identities=17% Similarity=0.139 Sum_probs=116.0
Q ss_pred HHHHhcCCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcC-CCCcceEEeeeecCCceee
Q 038098 287 IFQATNGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIR-HRNIIKIISSCSSDDFKAL 365 (580)
Q Consensus 287 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~l 365 (580)
+.....+|......+.|+.+.||++... ++.+++|+...........+..|+++++.+. +..+.++++++...+..++
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 3445577888888888999999999865 6899999986543233457889999999985 6778899999988888999
Q ss_pred EeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-------------------------------------
Q 038098 366 VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFG------------------------------------- 408 (580)
Q Consensus 366 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~------------------------------------- 408 (580)
||||++|.+|.+.+. +......++.+++++++.||.-
T Consensus 88 v~e~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (263)
T 3tm0_A 88 LMSEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED 161 (263)
T ss_dssp EEECCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred EEEecCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence 999999999987532 1122346889999999999950
Q ss_pred -------------------CCCCeEEecCCCCCEEeCCCCcEEEccccCcc
Q 038098 409 -------------------YSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAK 440 (580)
Q Consensus 409 -------------------~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~ 440 (580)
....++|||++|.||+++++..+.|+||+.+.
T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01458999999999999876666799999875
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.34 E-value=1.9e-14 Score=145.57 Aligned_cols=161 Identities=22% Similarity=0.177 Sum_probs=119.1
Q ss_pred CCCCCEEeccCCcCCCCCchhhhCC-----CCCceeeCCCCcCCcCCCcc-ccCCCCCcEEEcCCCCCCCC-----CCCC
Q 038098 15 LQKLQLLSLEDNQLEGSIPDDLCRL-----AALFELDSGGNKLDGFVPAC-FGNLTNLRNLYLGSNKLTSI-----PSTL 83 (580)
Q Consensus 15 l~~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~l~~N~l~~l-----p~~~ 83 (580)
+++|+.|+|++|.|+......+..+ ++|++|+|++|.|+...... ...+++|++|+|++|+|+.. ...+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 4678999999999985544444433 68999999999987433333 33467899999999999752 2222
Q ss_pred -cCCCCCceEeCcCCccc----------ccCCCcccEEeCCCCcCCCCC----CcccCCccccceecccccccccc----
Q 038098 84 -WNLKDILYLDLSSNFLL----------IGNLKVLVQVDLSMNNFSDVI----PTTIGGLKDLQYLFLEYNRLQGS---- 144 (580)
Q Consensus 84 -~~l~~L~~L~l~~n~l~----------~~~l~~L~~L~l~~N~l~~~~----~~~~~~l~~L~~L~l~~n~l~~~---- 144 (580)
...++|++|+|++|.|. +..+++|++|+|++|.|+... +..+...++|+.|+|++|.|++.
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 24678999999999982 367888999999999987533 45566778999999999999853
Q ss_pred CCcccccccccccccccccccCCCccccccc
Q 038098 145 IPDSIGDLINLKSLNLSNNNLSGTIPISLEK 175 (580)
Q Consensus 145 ~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 175 (580)
+...+...++|++|+|++|.|++.....+..
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCHHHHHHHHH
T ss_pred HHHHHHhCCCCCEEeccCCCCCHHHHHHHHH
Confidence 3344556688999999999998655544443
No 399
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.30 E-value=2e-13 Score=147.85 Aligned_cols=182 Identities=12% Similarity=0.013 Sum_probs=114.1
Q ss_pred ccccCCCcccCC-C-CCCCEEeccCCc-CCC-CCchhhhCCCCCceeeCCCCcCCcCC----CccccCCCCCcEEEcCCC
Q 038098 3 NLNGSIPIAVGK-L-QKLQLLSLEDNQ-LEG-SIPDDLCRLAALFELDSGGNKLDGFV----PACFGNLTNLRNLYLGSN 74 (580)
Q Consensus 3 ~~~~~~p~~~~~-l-~~L~~L~L~~n~-l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~l~~N 74 (580)
.+++..+..+.. + .+|++|+|++|. ++. .++.....+++|++|+|++|.+++.. +..+..+++|++|+|++|
T Consensus 123 ~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n 202 (592)
T 3ogk_B 123 IVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMT 202 (592)
T ss_dssp BCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTC
T ss_pred EecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeecc
Confidence 344444444444 2 348888888776 211 12223346788888888888776542 234566788888888888
Q ss_pred CCCC-----CCCCCcCCCCCceEeCcCCcc-----cccCCCcccEEeCCCCcCC---CCCCcccCCccccceeccccccc
Q 038098 75 KLTS-----IPSTLWNLKDILYLDLSSNFL-----LIGNLKVLVQVDLSMNNFS---DVIPTTIGGLKDLQYLFLEYNRL 141 (580)
Q Consensus 75 ~l~~-----lp~~~~~l~~L~~L~l~~n~l-----~~~~l~~L~~L~l~~N~l~---~~~~~~~~~l~~L~~L~l~~n~l 141 (580)
.++. ++..+.++++|++|+|++|.+ .+.++++|+.|+++.+... ...+..+..+++|+.|+++++..
T Consensus 203 ~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~ 282 (592)
T 3ogk_B 203 EFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP 282 (592)
T ss_dssp CCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT
T ss_pred CCCccCHHHHHHHHhhCCCCcEEeccCccHHHHHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch
Confidence 8763 333344677888888888876 2556777788877753322 12234556667777777777544
Q ss_pred cccCCcccccccccccccccccccCCCcc-ccccccCcccEEEcc
Q 038098 142 QGSIPDSIGDLINLKSLNLSNNNLSGTIP-ISLEKLLDLKDINVS 185 (580)
Q Consensus 142 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~l~l~ 185 (580)
. .+|..+..+++|+.|+|++|.+++... ..+..+++|+.|+++
T Consensus 283 ~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~ 326 (592)
T 3ogk_B 283 N-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR 326 (592)
T ss_dssp T-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE
T ss_pred h-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc
Confidence 3 566667777777777777777654332 335667777777777
No 400
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.28 E-value=2e-13 Score=147.78 Aligned_cols=205 Identities=14% Similarity=0.061 Sum_probs=142.5
Q ss_pred CccccC----CCcccCCCCCCCEEeccCCcCCCC----CchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCC
Q 038098 2 NNLNGS----IPIAVGKLQKLQLLSLEDNQLEGS----IPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGS 73 (580)
Q Consensus 2 N~~~~~----~p~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 73 (580)
|.+++. ++..+..+++|++|+|++|.+++. ++..+.++++|++|+|++|.+.+ ++..+.++++|+.|++++
T Consensus 174 ~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 174 SSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp CEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred ccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 455444 334556789999999999999733 44556788999999999999985 567889999999999985
Q ss_pred CCCC----CCCCCCcCCCCCceEeCcCCcc-----cccCCCcccEEeCCCCcCCCCCC-cccCCccccceeccccccccc
Q 038098 74 NKLT----SIPSTLWNLKDILYLDLSSNFL-----LIGNLKVLVQVDLSMNNFSDVIP-TTIGGLKDLQYLFLEYNRLQG 143 (580)
Q Consensus 74 N~l~----~lp~~~~~l~~L~~L~l~~n~l-----~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~l~~n~l~~ 143 (580)
+... ..+..+..+++|+.|+++++.. .+..+++|++|+|++|.++.... ..+..+++|+.|+++ |.+.+
T Consensus 253 ~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~ 331 (592)
T 3ogk_B 253 LNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGD 331 (592)
T ss_dssp CCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHH
T ss_pred cccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCH
Confidence 4322 2345666778888888887643 35677888999999888765433 335778888998888 44432
Q ss_pred -cCCccccccccccccccc-----------ccccCCCc-cccccccCcccEEEccCCcccCCCCCC--CCCccCccccCC
Q 038098 144 -SIPDSIGDLINLKSLNLS-----------NNNLSGTI-PISLEKLLDLKDINVSFNKLEGEIPNK--GPFRNFSTESFE 208 (580)
Q Consensus 144 -~~p~~~~~l~~L~~L~l~-----------~N~l~~~~-~~~~~~l~~L~~l~l~~N~l~~~~~~~--~~~~~l~~~~~~ 208 (580)
.++..+..+++|+.|+|+ .|.+++.. +.....+++|+.|+++.|.+++..... ..+++++.+++.
T Consensus 332 ~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~ 411 (592)
T 3ogk_B 332 RGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLV 411 (592)
T ss_dssp HHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEE
T ss_pred HHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEe
Confidence 344445667888888888 36666432 223445788888888888877543211 124455555554
No 401
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.21 E-value=4.9e-11 Score=114.58 Aligned_cols=136 Identities=15% Similarity=0.122 Sum_probs=100.9
Q ss_pred CCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCC--cceEEeeeecCCceeeEeecc
Q 038098 293 GFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRN--IIKIISSCSSDDFKALVLEYM 370 (580)
Q Consensus 293 ~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~ 370 (580)
++....+.+.|..+.||++...+|+.+++|+.... ....+..|+++++.+.+.+ +.+++++...++..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 34433333455569999998777889999997533 3356788999999986544 556888888878889999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----------------------------------------
Q 038098 371 PHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY----------------------------------------- 409 (580)
Q Consensus 371 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~----------------------------------------- 409 (580)
+|.++. ... .+ ...++.++++.+..||...
T Consensus 98 ~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
T 1nd4_A 98 PGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPA 168 (264)
T ss_dssp SSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHH
T ss_pred CCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHH
Confidence 998884 211 12 2357788888888888321
Q ss_pred --------------CCCeEEecCCCCCEEeCCCCcEEEccccCcc
Q 038098 410 --------------SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAK 440 (580)
Q Consensus 410 --------------~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~ 440 (580)
...++|||++|.||++++++.+.|+|||.+.
T Consensus 169 ~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 169 ELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1129999999999999887667799999876
No 402
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.19 E-value=1.5e-13 Score=148.95 Aligned_cols=203 Identities=14% Similarity=0.086 Sum_probs=136.0
Q ss_pred CCcccCCCCCCCEEeccCCcCCCCC-chhhhCCCCCceeeCCCCcCCcC-CCccccCCCCCcEEEcC---------CCCC
Q 038098 8 IPIAVGKLQKLQLLSLEDNQLEGSI-PDDLCRLAALFELDSGGNKLDGF-VPACFGNLTNLRNLYLG---------SNKL 76 (580)
Q Consensus 8 ~p~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~l~---------~N~l 76 (580)
+|..+..+++|++|+|++|.++... +..+..+++|++|++++| +... .+.....+++|++|+|+ .|.+
T Consensus 281 l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l 359 (594)
T 2p1m_B 281 LPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVAL 359 (594)
T ss_dssp GGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCC
T ss_pred HHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCC
Confidence 3334446899999999999976432 233568899999999988 4422 22233458999999983 3455
Q ss_pred CCCC-CCC-cCCCCCceEeCcCCccc------c-cCCCcccEEeCC--C----CcCCCCCC-----cccCCccccceecc
Q 038098 77 TSIP-STL-WNLKDILYLDLSSNFLL------I-GNLKVLVQVDLS--M----NNFSDVIP-----TTIGGLKDLQYLFL 136 (580)
Q Consensus 77 ~~lp-~~~-~~l~~L~~L~l~~n~l~------~-~~l~~L~~L~l~--~----N~l~~~~~-----~~~~~l~~L~~L~l 136 (580)
+... ..+ ..+++|++|.++.|.+. + ..+++|+.|+++ + |.++..+. ..+..+++|+.|+|
T Consensus 360 ~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L 439 (594)
T 2p1m_B 360 TEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSL 439 (594)
T ss_dssp CHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEEC
T ss_pred CHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEee
Confidence 4311 112 24688899988888872 2 357889999998 4 56653321 12556788889998
Q ss_pred ccccccccCCccccc-ccccccccccccccCCCccccc-cccCcccEEEccCCcccCCCC--CCCCCccCccccCCCCcc
Q 038098 137 EYNRLQGSIPDSIGD-LINLKSLNLSNNNLSGTIPISL-EKLLDLKDINVSFNKLEGEIP--NKGPFRNFSTESFEGNEL 212 (580)
Q Consensus 137 ~~n~l~~~~p~~~~~-l~~L~~L~l~~N~l~~~~~~~~-~~l~~L~~l~l~~N~l~~~~~--~~~~~~~l~~~~~~~n~~ 212 (580)
++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|++++|+++.... ....+++++.+++.+++.
T Consensus 440 ~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 440 SG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp CS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred cC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 77 666554445544 7888999999888876554444 567888999999988854322 223466777777776654
No 403
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.18 E-value=4.8e-13 Score=144.89 Aligned_cols=122 Identities=13% Similarity=0.103 Sum_probs=64.2
Q ss_pred CCCCCCEEeccCCcCCCCCchhhh-CCCCCceeeCCCC-cCCcC-CCccccCCCCCcEEEcCCCCCCC-----CCCCCcC
Q 038098 14 KLQKLQLLSLEDNQLEGSIPDDLC-RLAALFELDSGGN-KLDGF-VPACFGNLTNLRNLYLGSNKLTS-----IPSTLWN 85 (580)
Q Consensus 14 ~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~N-~l~~~-~~~~~~~l~~L~~L~l~~N~l~~-----lp~~~~~ 85 (580)
.+++|++|+|++|.++...+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.++. ++.....
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 455666666666666544444443 4566666666666 33321 22233456666666666666543 2222234
Q ss_pred CCCCceEeCcCCc--c-------cccCCCcccEEeCCCC-cCCCCCCcccCCccccceecc
Q 038098 86 LKDILYLDLSSNF--L-------LIGNLKVLVQVDLSMN-NFSDVIPTTIGGLKDLQYLFL 136 (580)
Q Consensus 86 l~~L~~L~l~~n~--l-------~~~~l~~L~~L~l~~N-~l~~~~~~~~~~l~~L~~L~l 136 (580)
+++|++|++++|. + ....+++|+.|++++| .+.+ .+..+..+++|+.|++
T Consensus 183 ~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l 242 (594)
T 2p1m_B 183 YTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGT 242 (594)
T ss_dssp CCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEEC
T ss_pred CCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEccc
Confidence 5566666666664 2 1233566666666666 2222 3444445555555553
No 404
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.03 E-value=1.3e-10 Score=116.48 Aligned_cols=174 Identities=18% Similarity=0.186 Sum_probs=117.3
Q ss_pred CCCCEEeccCCcCCC-CC-------chhhhCCCCCceeeCCCCcCC---------cCCCccccCCCCCcEEEcCCCCCCC
Q 038098 16 QKLQLLSLEDNQLEG-SI-------PDDLCRLAALFELDSGGNKLD---------GFVPACFGNLTNLRNLYLGSNKLTS 78 (580)
Q Consensus 16 ~~L~~L~L~~n~l~~-~~-------p~~~~~l~~L~~L~L~~N~l~---------~~~~~~~~~l~~L~~L~l~~N~l~~ 78 (580)
..++.|.+......+ .. ..++..+++|+.|.+.++... +.+...+..+++|+.|+|++|.-..
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~ 186 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS 186 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce
Confidence 456778777665431 11 234566788999988766432 1233456778899999998874223
Q ss_pred CCCCCcCCCCCceEeCcCCccc--------ccCCCcccEEeCCC--CcCCCC-----CCccc--CCccccceeccccccc
Q 038098 79 IPSTLWNLKDILYLDLSSNFLL--------IGNLKVLVQVDLSM--NNFSDV-----IPTTI--GGLKDLQYLFLEYNRL 141 (580)
Q Consensus 79 lp~~~~~l~~L~~L~l~~n~l~--------~~~l~~L~~L~l~~--N~l~~~-----~~~~~--~~l~~L~~L~l~~n~l 141 (580)
++. + .+++|+.|+|..|.+. ...+++|+.|+|+. |...+. +...+ ..+++|+.|+|++|.+
T Consensus 187 l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i 264 (362)
T 2ra8_A 187 IGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEE 264 (362)
T ss_dssp CCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTT
T ss_pred ecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCC
Confidence 444 3 3789999999988872 23789999998853 222111 11122 2478999999999998
Q ss_pred cccCCcccc---cccccccccccccccCCC----ccccccccCcccEEEccCCcccC
Q 038098 142 QGSIPDSIG---DLINLKSLNLSNNNLSGT----IPISLEKLLDLKDINVSFNKLEG 191 (580)
Q Consensus 142 ~~~~p~~~~---~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~l~l~~N~l~~ 191 (580)
.+..+..+. .+++|+.|+|+.|.+.+. ++..+..+++|+.|++++|.++.
T Consensus 265 ~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 265 QNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp HHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred chHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 754433332 478999999999999864 34445567899999999998764
No 405
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.03 E-value=7.4e-10 Score=111.75 Aligned_cols=142 Identities=11% Similarity=0.140 Sum_probs=106.7
Q ss_pred cCceeccccCceEEEEEeCCCCEEEEEEEe--ccc-cchhhhHHHHHHHHhhcC--CCCcceEEeeeecC---CceeeEe
Q 038098 296 ENNLIGRGGFGSVYKARIQDGMEVAVKVFD--LQY-GRAFKSFDIECDMIKRIR--HRNIIKIISSCSSD---DFKALVL 367 (580)
Q Consensus 296 ~~~~lg~G~~g~v~~~~~~~~~~vavK~~~--~~~-~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~---~~~~lv~ 367 (580)
..+.++.|.++.||+.... +..+++|+.. ... ......+..|+.+++.+. +..+.++++++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 3567899999999999876 4678888765 221 123457888999999997 45678899988776 4578999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC--------------------------------------
Q 038098 368 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY-------------------------------------- 409 (580)
Q Consensus 368 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~-------------------------------------- 409 (580)
||++|..+.+.. -..++...+..++.+++++|+.||.-.
T Consensus 121 e~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 121 EFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp ECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred EecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 999998775421 123678888899999999999999410
Q ss_pred -----------------CCCeEEecCCCCCEEeCCCCc--EEEccccCccc
Q 038098 410 -----------------SVPIIHCDLKPSNVLLDDNMV--AHLSDFGMAKP 441 (580)
Q Consensus 410 -----------------~~~i~H~dlk~~Nill~~~~~--~kl~Dfg~a~~ 441 (580)
...++|||+++.||+++.++. +.|+||+.+..
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 256999999999999997753 68999999873
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.98 E-value=3.1e-11 Score=120.97 Aligned_cols=174 Identities=21% Similarity=0.190 Sum_probs=123.2
Q ss_pred cccCCCCCCCEEeccCCcCC---------CCCchhhhCCCCCceeeCCCCc-CCcCCCccccCCCCCcEEEcCCCCCCCC
Q 038098 10 IAVGKLQKLQLLSLEDNQLE---------GSIPDDLCRLAALFELDSGGNK-LDGFVPACFGNLTNLRNLYLGSNKLTSI 79 (580)
Q Consensus 10 ~~~~~l~~L~~L~L~~n~l~---------~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~l~~N~l~~l 79 (580)
.++..+++|+.|.+..+... +.++..+..+|+|+.|+|++|. +. . +. +. +++|+.|+|..|.++.-
T Consensus 133 ~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~-l-~~-~~-~~~L~~L~L~~~~l~~~ 208 (362)
T 2ra8_A 133 ENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS-I-GK-KP-RPNLKSLEIISGGLPDS 208 (362)
T ss_dssp TTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB-C-CS-CB-CTTCSEEEEECSBCCHH
T ss_pred HhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce-e-cc-cc-CCCCcEEEEecCCCChH
Confidence 34567889999999776432 1355677889999999999984 33 2 22 44 89999999999987641
Q ss_pred C-CCC--cCCCCCceEeCcC--Cc------c-----cc--cCCCcccEEeCCCCcCCCCCCccc---CCccccceecccc
Q 038098 80 P-STL--WNLKDILYLDLSS--NF------L-----LI--GNLKVLVQVDLSMNNFSDVIPTTI---GGLKDLQYLFLEY 138 (580)
Q Consensus 80 p-~~~--~~l~~L~~L~l~~--n~------l-----~~--~~l~~L~~L~l~~N~l~~~~~~~~---~~l~~L~~L~l~~ 138 (580)
. ..+ ..+++|++|+|+. |. + .+ ..+++|+.|+|++|.+....+..+ ..+++|+.|+|+.
T Consensus 209 ~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~ 288 (362)
T 2ra8_A 209 VVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISA 288 (362)
T ss_dssp HHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCS
T ss_pred HHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCC
Confidence 1 122 2688999999853 22 1 11 357899999999999875333222 3578999999999
Q ss_pred cccccc----CCcccccccccccccccccccCCCccccccccCcccEEEccCCc
Q 038098 139 NRLQGS----IPDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNK 188 (580)
Q Consensus 139 n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~ 188 (580)
|.|++. ++..+..+++|+.|+|++|.|++..-..+...- ...+++++|+
T Consensus 289 n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al-g~~~~~~~~~ 341 (362)
T 2ra8_A 289 GVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL-PMKIDVSDSQ 341 (362)
T ss_dssp SCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC-CSEEECCSBC
T ss_pred CCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc-CCEEEecCCc
Confidence 999864 344456689999999999998865444444311 3568888887
No 407
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.94 E-value=1e-09 Score=107.96 Aligned_cols=186 Identities=18% Similarity=0.161 Sum_probs=122.3
Q ss_pred CceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcC-CCC--cceEEeeeecCC---ceeeEeecc
Q 038098 297 NNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIR-HRN--IIKIISSCSSDD---FKALVLEYM 370 (580)
Q Consensus 297 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~~~~~~~~~~---~~~lv~e~~ 370 (580)
.+.++.|....||+.. +.+++|+.... .....+..|.++++.+. +.. +.+++......+ ..++|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999863 56999986432 34567888999998884 332 445555544333 347899999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC------------------------------------------
Q 038098 371 PHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFG------------------------------------------ 408 (580)
Q Consensus 371 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~------------------------------------------ 408 (580)
+|.++.+... ..++..++..++.++++.++.||.-
T Consensus 99 ~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 99 KGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 9988875332 2367777888899999999888841
Q ss_pred -------------CCCCeEEecCCCCCEEeCC--CCcEEEccccCccccCCCCCcccccc-------------cccCCCc
Q 038098 409 -------------YSVPIIHCDLKPSNVLLDD--NMVAHLSDFGMAKPLLKEDQSLTQTQ-------------TLATIGY 460 (580)
Q Consensus 409 -------------~~~~i~H~dlk~~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~-------------~~~~~~y 460 (580)
....++|||++|.||++++ +..+.|+||+.+..-... ....... .....++
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~-~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPD-NDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTT-HHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChH-HHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 1135899999999999998 566889999998643110 0000000 0000011
Q ss_pred CC-cccccCCCCCCchhhHhHHHHHHHHHhCCCCC
Q 038098 461 MA-PEYGREGQVSTNGDVYSFGIMLMETFTRKKPT 494 (580)
Q Consensus 461 ~a-PE~~~~~~~~~~~Dvws~Gvil~elltg~~p~ 494 (580)
.. |+.... .....+.|++|.++|++.+|..+|
T Consensus 255 ~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 255 KDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp SCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 11 221110 112258999999999999999875
No 408
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.88 E-value=9.1e-09 Score=105.09 Aligned_cols=177 Identities=16% Similarity=0.136 Sum_probs=109.7
Q ss_pred ccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCC---------
Q 038098 5 NGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNK--------- 75 (580)
Q Consensus 5 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~--------- 75 (580)
..+...+|.++++|+.+.+.++.. .+....|.++.+|+.+++..| ++.+...+|.+++.|+.+.+.++.
T Consensus 151 ~~i~~~aF~~c~~L~~i~l~~~~~-~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~ 228 (394)
T 4fs7_A 151 TVIGDEAFATCESLEYVSLPDSME-TLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDFALS 228 (394)
T ss_dssp CEECTTTTTTCTTCCEEECCTTCC-EECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTT
T ss_pred cccchhhhcccCCCcEEecCCccc-eeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehhhcc
Confidence 334456888899999999976543 366778888888888888776 555666677777777666655432
Q ss_pred ---C---------CCCC-CCCcCCCCCceEeCcCCcc--------------------------cccCCCcccEEeCCCCc
Q 038098 76 ---L---------TSIP-STLWNLKDILYLDLSSNFL--------------------------LIGNLKVLVQVDLSMNN 116 (580)
Q Consensus 76 ---l---------~~lp-~~~~~l~~L~~L~l~~n~l--------------------------~~~~l~~L~~L~l~~N~ 116 (580)
| +.+. ..+..+.+|+.+.+..+.. .+..+.+|+.+.+..+
T Consensus 229 ~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i~~~~F~~~~~L~~i~l~~~- 307 (394)
T 4fs7_A 229 KTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSLTEVKLLDS- 307 (394)
T ss_dssp TCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEECTTTTTTCTTCCEEEECTT-
T ss_pred cCCCceEEECCCceecccccccccccceeEEcCCCcceeeccccccccccceeccCceeeccccccccccccccccccc-
Confidence 1 1122 2344566777777765543 2445556666666543
Q ss_pred CCCCCCcccCCccccceeccccccccccCCcccccccccccccccccccCCCccccccccCcccEEEccC
Q 038098 117 FSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVSF 186 (580)
Q Consensus 117 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~ 186 (580)
++.+...+|.++++|+.++|.++ ++.....+|.++.+|+.+++..| ++.....+|..+.+|+.+++..
T Consensus 308 i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~ 375 (394)
T 4fs7_A 308 VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPK 375 (394)
T ss_dssp CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEG
T ss_pred cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECC
Confidence 54455566666666666666543 44344556666666666666655 4444455666666666666643
No 409
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.78 E-value=3.5e-08 Score=100.72 Aligned_cols=107 Identities=11% Similarity=0.153 Sum_probs=65.1
Q ss_pred ccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccccccccccccCCCccccccccCccc
Q 038098 101 IGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLK 180 (580)
Q Consensus 101 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 180 (580)
|.++..|+.+.+.++.. .+...+|.+++.|+.+.+. +.++......|.++.+|+.++|.++ ++.....+|..+.+|+
T Consensus 261 F~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~ 337 (394)
T 4gt6_A 261 FDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLE 337 (394)
T ss_dssp TTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred eeecccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCC
Confidence 45566777777765433 3556677777777777775 3444345566777777777777654 5445566677777777
Q ss_pred EEEccCCcccCCCCCC-CCCccCccccCCCCc
Q 038098 181 DINVSFNKLEGEIPNK-GPFRNFSTESFEGNE 211 (580)
Q Consensus 181 ~l~l~~N~l~~~~~~~-~~~~~l~~~~~~~n~ 211 (580)
.+.+..+ ++.+.... ....+|+.+.+.++.
T Consensus 338 ~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 338 RIAIPSS-VTKIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp EEEECTT-CCBCCGGGGTTCTTCCEEEESSCH
T ss_pred EEEECcc-cCEEhHhHhhCCCCCCEEEECCce
Confidence 7777543 44333222 334555666665554
No 410
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.70 E-value=3e-09 Score=96.20 Aligned_cols=107 Identities=9% Similarity=0.116 Sum_probs=53.5
Q ss_pred hhCCCCCceeeCCCC-cCCcC----CCccccCCCCCcEEEcCCCCCCC-----CCCCCcCCCCCceEeCcCCcc------
Q 038098 36 LCRLAALFELDSGGN-KLDGF----VPACFGNLTNLRNLYLGSNKLTS-----IPSTLWNLKDILYLDLSSNFL------ 99 (580)
Q Consensus 36 ~~~l~~L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~l~~N~l~~-----lp~~~~~l~~L~~L~l~~n~l------ 99 (580)
+...++|++|+|++| .|... +...+...++|++|+|++|+|.. +...+...++|++|+|++|.|
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 334444555555554 44321 11223344455555555555442 222233334455555555555
Q ss_pred ----cccCCCcccEEeC--CCCcCCCCC----CcccCCccccceecccccccc
Q 038098 100 ----LIGNLKVLVQVDL--SMNNFSDVI----PTTIGGLKDLQYLFLEYNRLQ 142 (580)
Q Consensus 100 ----~~~~l~~L~~L~l--~~N~l~~~~----~~~~~~l~~L~~L~l~~n~l~ 142 (580)
.+...++|++|+| ++|.|.... ...+...++|+.|+|++|.+.
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 1344556666666 666665432 233444567778888777775
No 411
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.67 E-value=8e-08 Score=98.06 Aligned_cols=92 Identities=11% Similarity=0.031 Sum_probs=64.0
Q ss_pred ccccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCC-
Q 038098 3 NLNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPS- 81 (580)
Q Consensus 3 ~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~- 81 (580)
++..+...+|..+..+....... +......+|.++++|+.+.+.++- ..+....|.++++|+.+.+..| ++.++.
T Consensus 127 ~l~~i~~~aF~~~~~~~~~~~~~--~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~ 202 (394)
T 4fs7_A 127 MLKSIGVEAFKGCDFKEITIPEG--VTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDY 202 (394)
T ss_dssp TCCEECTTTTTTCCCSEEECCTT--CCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTT
T ss_pred ceeeecceeeecccccccccCcc--ccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCch
Confidence 44445556777765544443333 232456789999999999998765 4478889999999999999876 666654
Q ss_pred CCcCCCCCceEeCcCCc
Q 038098 82 TLWNLKDILYLDLSSNF 98 (580)
Q Consensus 82 ~~~~l~~L~~L~l~~n~ 98 (580)
.+.++..|+.+.+..+.
T Consensus 203 ~F~~~~~L~~i~~~~~~ 219 (394)
T 4fs7_A 203 CFAECILLENMEFPNSL 219 (394)
T ss_dssp TTTTCTTCCBCCCCTTC
T ss_pred hhccccccceeecCCCc
Confidence 45566777776665543
No 412
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.66 E-value=1.4e-07 Score=93.19 Aligned_cols=136 Identities=17% Similarity=0.189 Sum_probs=101.9
Q ss_pred CCCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCC----CCcceEEeeeecCCceeeEee
Q 038098 293 GFSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRH----RNIIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 293 ~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~~~~~~~~~~~~~lv~e 368 (580)
.....+.++.|....||+. |+.+++|+.... .....+..|.++++.+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5566778999999999998 678999986432 223568889999988865 224555555 56789999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---------------------------------------
Q 038098 369 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY--------------------------------------- 409 (580)
Q Consensus 369 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~--------------------------------------- 409 (580)
|++|.++..... ..++..++..++.++++.++.||.-.
T Consensus 108 ~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 108 YIKGERITYEQY---HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCCCBCCCHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ecCCcccccccc---ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 999998874322 23567777788888888888888321
Q ss_pred ---------------------CCCeEEecCCCCCEEeCCCCcEEEccccCccc
Q 038098 410 ---------------------SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 441 (580)
Q Consensus 410 ---------------------~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~ 441 (580)
...++|+|++|.||+++.+..+.|+||+.+..
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 12359999999999999976679999999863
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.62 E-value=4.8e-09 Score=94.83 Aligned_cols=108 Identities=11% Similarity=0.088 Sum_probs=53.7
Q ss_pred cccCCCCCcEEEcCCC-CCCC-----CCCCCcCCCCCceEeCcCCcc----------cccCCCcccEEeCCCCcCCCC--
Q 038098 59 CFGNLTNLRNLYLGSN-KLTS-----IPSTLWNLKDILYLDLSSNFL----------LIGNLKVLVQVDLSMNNFSDV-- 120 (580)
Q Consensus 59 ~~~~l~~L~~L~l~~N-~l~~-----lp~~~~~l~~L~~L~l~~n~l----------~~~~l~~L~~L~l~~N~l~~~-- 120 (580)
.+...++|++|+|++| .|.. +...+...++|++|+|++|.| .+...++|++|+|++|.|...
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 3445555666666655 5543 223334445555666666655 123344555666666655532
Q ss_pred --CCcccCCccccceecc--cccccccc----CCcccccccccccccccccccC
Q 038098 121 --IPTTIGGLKDLQYLFL--EYNRLQGS----IPDSIGDLINLKSLNLSNNNLS 166 (580)
Q Consensus 121 --~~~~~~~l~~L~~L~l--~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 166 (580)
+...+...++|+.|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 1233444455566666 55555432 1223333455566666555554
No 414
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.57 E-value=2.5e-07 Score=94.31 Aligned_cols=106 Identities=9% Similarity=0.173 Sum_probs=88.7
Q ss_pred CCcCCCCCceEeCcCCcc-----cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCcccccccccc
Q 038098 82 TLWNLKDILYLDLSSNFL-----LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLK 156 (580)
Q Consensus 82 ~~~~l~~L~~L~l~~n~l-----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 156 (580)
+|.++.+|+.+.+..+.. .+.+++.|+.+.+. +.++.+...+|.++.+|+.+.|..+ ++.....+|.++.+|+
T Consensus 260 aF~~c~~L~~i~lp~~~~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~ 337 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLE 337 (394)
T ss_dssp TTTTCSSCCEEECCTTCCEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred eeeecccccEEecccccceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCC
Confidence 455678899999987754 57889999999996 5677788899999999999999875 6646678899999999
Q ss_pred cccccccccCCCccccccccCcccEEEccCCccc
Q 038098 157 SLNLSNNNLSGTIPISLEKLLDLKDINVSFNKLE 190 (580)
Q Consensus 157 ~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 190 (580)
.+.|..+ ++.....+|.++.+|+.+++.+|...
T Consensus 338 ~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 338 RIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ 370 (394)
T ss_dssp EEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH
T ss_pred EEEECcc-cCEEhHhHhhCCCCCCEEEECCceee
Confidence 9999765 66567789999999999999988643
No 415
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.55 E-value=6e-07 Score=86.95 Aligned_cols=139 Identities=18% Similarity=0.098 Sum_probs=93.6
Q ss_pred cCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCC---CcceEEeeeecCCceeeEeeccCC
Q 038098 296 ENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHR---NIIKIISSCSSDDFKALVLEYMPH 372 (580)
Q Consensus 296 ~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~lv~e~~~~ 372 (580)
..+.++.|.++.||++...+|+.++||+...........+..|++.++.+.+. .+.+++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 35679999999999999888999999996543333346789999999999865 577888764 36899999999
Q ss_pred CChHH--------H---hhcCCC--------------------CCCHHHHH-----------------------HHHHHH
Q 038098 373 GSLEK--------C---LYSSNY--------------------ILDIFQRL-----------------------NIMIDV 398 (580)
Q Consensus 373 g~L~~--------~---l~~~~~--------------------~~~~~~~~-----------------------~i~~~i 398 (580)
+++.. . +|.... .-+|...+ ..+..+
T Consensus 95 ~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l 174 (288)
T 3d1u_A 95 RPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKV 174 (288)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 87531 1 222110 01333221 111122
Q ss_pred HHHHHHH-hcCCCCCeEEecCCCCCEEeCCCCcEEEccccCcc
Q 038098 399 ASALEYL-HFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAK 440 (580)
Q Consensus 399 ~~~l~~L-h~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~ 440 (580)
+..+..+ -......++|+|+.+.||+++.+ .+.|+|| .+.
T Consensus 175 ~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 175 LDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp HHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 2222211 12335679999999999999884 5889999 654
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.50 E-value=8.7e-09 Score=97.85 Aligned_cols=81 Identities=23% Similarity=0.255 Sum_probs=45.4
Q ss_pred CCCCCceeeCCCCcCCcC--CCccccCCCCCcEEEcCCCCCCCCCCCCcCCCCCceEeCcCCcccccCCCcccEEeCCCC
Q 038098 38 RLAALFELDSGGNKLDGF--VPACFGNLTNLRNLYLGSNKLTSIPSTLWNLKDILYLDLSSNFLLIGNLKVLVQVDLSMN 115 (580)
Q Consensus 38 ~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~l~~N~l~~lp~~~~~l~~L~~L~l~~n~l~~~~l~~L~~L~l~~N 115 (580)
++++|++|+|++|+|+++ +|..+..+++|+.|+|++|+|+.+. .+..+ ..+ +|+.|+|++|
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~-~l~~l---------------~~l-~L~~L~L~~N 230 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSER-ELDKI---------------KGL-KLEELWLDGN 230 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGG-GGGGG---------------TTS-CCSEEECTTS
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCch-hhhhc---------------ccC-CcceEEccCC
Confidence 455566666666666542 2244455566666666666655541 12211 122 6677777777
Q ss_pred cCCCCCC-------cccCCccccceec
Q 038098 116 NFSDVIP-------TTIGGLKDLQYLF 135 (580)
Q Consensus 116 ~l~~~~~-------~~~~~l~~L~~L~ 135 (580)
.+.+..| ..+..+|+|+.||
T Consensus 231 pl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 231 SLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp TTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred cCccccCcchhHHHHHHHHCcccCeEC
Confidence 7765433 2356778888887
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.45 E-value=2.7e-08 Score=94.44 Aligned_cols=66 Identities=24% Similarity=0.335 Sum_probs=34.8
Q ss_pred cCCCcccEEeCCCCcCCCCC--CcccCCccccceeccccccccccCCccccccc--ccccccccccccCCCc
Q 038098 102 GNLKVLVQVDLSMNNFSDVI--PTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLI--NLKSLNLSNNNLSGTI 169 (580)
Q Consensus 102 ~~l~~L~~L~l~~N~l~~~~--~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~ 169 (580)
.++++|+.|+|++|.|+++. +..+..+++|+.|+|++|.|++. ..+..+. +|+.|+|++|.+.+..
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~ 236 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTF 236 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGC
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcccc
Confidence 34556666666666666532 23444556666666666666532 1222222 5555666666655433
No 418
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.42 E-value=1.4e-06 Score=85.36 Aligned_cols=135 Identities=16% Similarity=0.127 Sum_probs=95.4
Q ss_pred CceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCC---CcceEEeeee-cCCceeeEeeccCC
Q 038098 297 NNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHR---NIIKIISSCS-SDDFKALVLEYMPH 372 (580)
Q Consensus 297 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~~~~ 372 (580)
.+.++.|....||+. |+.+++|+... ......+..|.++++.+.+. .+.+++.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 356788888899988 57789998532 23346788999999999752 3566777764 45567899999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 038098 373 GSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFG-------------------------------------------- 408 (580)
Q Consensus 373 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-------------------------------------------- 408 (580)
.++.+.... .++......++.++++.++.||.-
T Consensus 98 ~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 98 QILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp EECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred eECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 888763211 234555555666666666666521
Q ss_pred -------------CCCCeEEecCCCCCEEeCC---CCc-EEEccccCcc
Q 038098 409 -------------YSVPIIHCDLKPSNVLLDD---NMV-AHLSDFGMAK 440 (580)
Q Consensus 409 -------------~~~~i~H~dlk~~Nill~~---~~~-~kl~Dfg~a~ 440 (580)
....++|+|+++.||+++. ++. +.|+||+.+.
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~ 223 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA 223 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence 2345799999999999987 455 4899999876
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.41 E-value=2.1e-06 Score=82.50 Aligned_cols=140 Identities=17% Similarity=0.098 Sum_probs=101.3
Q ss_pred cCCCcCceeccccCc-eEEEEEeC-CCCEEEEEEEeccccchhhhHHHHHHHHhhcC-CCCcceEEeeeecCCceeeEee
Q 038098 292 NGFSENNLIGRGGFG-SVYKARIQ-DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIR-HRNIIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 292 ~~~~~~~~lg~G~~g-~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e 368 (580)
.+|+. +.+..|..+ .||+.... ++..+++|+-... ....+..|...++.+. +--+.++++++.+.+..++|||
T Consensus 25 ~g~~~-~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme 100 (272)
T 4gkh_A 25 YGYRW-ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTT 100 (272)
T ss_dssp TTCEE-EEEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred cCCeE-EEccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEE
Confidence 34433 345556665 68988754 4678999986532 3456788999998884 3347788999988899999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 038098 369 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFG---------------------------------------- 408 (580)
Q Consensus 369 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---------------------------------------- 408 (580)
+++|.++.+..... ......++.+++..+..||.-
T Consensus 101 ~l~G~~~~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (272)
T 4gkh_A 101 AIPGKTAFQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWP 175 (272)
T ss_dssp CCCSEEHHHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCC
T ss_pred eeCCccccccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchH
Confidence 99998887754321 123345677777888888831
Q ss_pred ---------------CCCCeEEecCCCCCEEeCCCCcEEEccccCcc
Q 038098 409 ---------------YSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAK 440 (580)
Q Consensus 409 ---------------~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~ 440 (580)
....++|||+.+.||+++.++.+-|+||+.+.
T Consensus 176 ~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 176 VEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 01237899999999999988777899999876
No 420
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.34 E-value=2.9e-06 Score=85.89 Aligned_cols=180 Identities=14% Similarity=0.157 Sum_probs=96.5
Q ss_pred CccccCCCcccCCCCCCCEEeccCCcCCCC------------CchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEE
Q 038098 2 NNLNGSIPIAVGKLQKLQLLSLEDNQLEGS------------IPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNL 69 (580)
Q Consensus 2 N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~------------~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 69 (580)
++++.+...+|..+.+++.+.+..+..... ....+.....+..+.+..+.- .+....|..+.+|+.+
T Consensus 144 ~~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~f~~~~~l~~i 222 (379)
T 4h09_A 144 KSVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVK-TVTAYGFSYGKNLKKI 222 (379)
T ss_dssp TTCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCC-EECTTTTTTCSSCSEE
T ss_pred ceeeccccchhcccccccccccccccceeecccceecccccceecccccccccccccccccee-EEeeccccccccccee
Confidence 345666677888888888888776543211 112233333444444443322 2344455555666666
Q ss_pred EcCCCCCCCCC-CCCcCCCCCceEeCcCCcc-----cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccc
Q 038098 70 YLGSNKLTSIP-STLWNLKDILYLDLSSNFL-----LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQG 143 (580)
Q Consensus 70 ~l~~N~l~~lp-~~~~~l~~L~~L~l~~n~l-----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 143 (580)
.+..+ ++.+. ..+.++.+|+.+.+..+-- .+.++.+|+.+.+..+ ++.+...+|.++++|+.+.+.++.++.
T Consensus 223 ~~~~~-~~~i~~~~f~~~~~L~~i~lp~~v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~ 300 (379)
T 4h09_A 223 TITSG-VTTLGDGAFYGMKALDEIAIPKNVTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIET 300 (379)
T ss_dssp ECCTT-CCEECTTTTTTCSSCCEEEECTTCCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCE
T ss_pred eeccc-eeEEccccccCCccceEEEcCCCccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccce
Confidence 55433 33333 2344555566665554421 3455556666665433 444455566666666666666665554
Q ss_pred cCCcccccccccccccccccccCCCccccccccCcccEEEcc
Q 038098 144 SIPDSIGDLINLKSLNLSNNNLSGTIPISLEKLLDLKDINVS 185 (580)
Q Consensus 144 ~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~ 185 (580)
.....|.++.+|+.+.|.++ ++.+...+|.++.+|+.+.+.
T Consensus 301 I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 301 LEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp ECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred ehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 44555666666666666543 443444556666666666553
No 421
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.30 E-value=2.8e-06 Score=85.26 Aligned_cols=74 Identities=8% Similarity=0.087 Sum_probs=56.2
Q ss_pred CceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCC--cceEEeeeecC-CceeeEeeccCCC
Q 038098 297 NNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRN--IIKIISSCSSD-DFKALVLEYMPHG 373 (580)
Q Consensus 297 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~-~~~~lv~e~~~~g 373 (580)
.+.++.|....+|+... +|+.+++|+.... ..+..|..+++.+.... +.++++++... +..++||||++|.
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~ 119 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGV 119 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSE
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCC
Confidence 46788999999999876 4788999987422 35788999999886533 56777776654 5679999999986
Q ss_pred ChH
Q 038098 374 SLE 376 (580)
Q Consensus 374 ~L~ 376 (580)
++.
T Consensus 120 ~l~ 122 (362)
T 3ovc_A 120 TLQ 122 (362)
T ss_dssp ETT
T ss_pred Ccc
Confidence 654
No 422
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.30 E-value=3.5e-06 Score=85.28 Aligned_cols=163 Identities=12% Similarity=0.072 Sum_probs=116.2
Q ss_pred cccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCCCCCCCCC-CCcCCCC
Q 038098 10 IAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSNKLTSIPS-TLWNLKD 88 (580)
Q Consensus 10 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~lp~-~~~~l~~ 88 (580)
.++.....+..+.+..+.-. .....+....+|+.+.+..+ +..+....|.++.+|+.+.+..+ ++.+.. .+.++.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~ 264 (379)
T 4h09_A 188 ESYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTA 264 (379)
T ss_dssp EECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTT
T ss_pred ccccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeeh
Confidence 45555666666666554333 45566777778888877655 45466677888888888888765 666654 4556778
Q ss_pred CceEeCcCCcc-----cccCCCcccEEeCCCCcCCCCCCcccCCccccceeccccccccccCCccccccccccccccccc
Q 038098 89 ILYLDLSSNFL-----LIGNLKVLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLNLSNN 163 (580)
Q Consensus 89 L~~L~l~~n~l-----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N 163 (580)
|+.+.+..+-- .|.++++|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++.....+|.++.+|+.+.+..+
T Consensus 265 l~~i~l~~~i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 265 LKTLNFYAKVKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CCEEEECCCCSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred hccccccccceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 88887765422 4778888899999888888888889999999999999765 65455678888999999988765
Q ss_pred ccCCCccccccccC
Q 038098 164 NLSGTIPISLEKLL 177 (580)
Q Consensus 164 ~l~~~~~~~~~~l~ 177 (580)
++..-..+|.++.
T Consensus 344 -v~~I~~~aF~~c~ 356 (379)
T 4h09_A 344 -ITLIESGAFEGSS 356 (379)
T ss_dssp -CCEECTTTTTTSS
T ss_pred -cCEEchhHhhCCC
Confidence 5545556666553
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.27 E-value=1.8e-06 Score=86.58 Aligned_cols=80 Identities=6% Similarity=0.006 Sum_probs=56.4
Q ss_pred cee-ccccCceEEEEEeC-------CCCEEEEEEEeccc---cchhhhHHHHHHHHhhcCC---CCcceEEeeeecC---
Q 038098 298 NLI-GRGGFGSVYKARIQ-------DGMEVAVKVFDLQY---GRAFKSFDIECDMIKRIRH---RNIIKIISSCSSD--- 360 (580)
Q Consensus 298 ~~l-g~G~~g~v~~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h---~niv~~~~~~~~~--- 360 (580)
+.| +.|....+|+.... +++.+++|+..... ......+..|+.+++.+.. -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 556 78888999998754 26788999864332 1113567889999888843 3577888887655
Q ss_pred CceeeEeeccCCCChHH
Q 038098 361 DFKALVLEYMPHGSLEK 377 (580)
Q Consensus 361 ~~~~lv~e~~~~g~L~~ 377 (580)
+..++||||++|.++.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35689999999876653
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.04 E-value=2.7e-05 Score=79.24 Aligned_cols=75 Identities=17% Similarity=0.153 Sum_probs=50.0
Q ss_pred CceeccccCceEEEEEeC-CCCEEEEEEEecccc-------chhhhHHHHHHHHhhcCC--C-CcceEEeeeecCCceee
Q 038098 297 NNLIGRGGFGSVYKARIQ-DGMEVAVKVFDLQYG-------RAFKSFDIECDMIKRIRH--R-NIIKIISSCSSDDFKAL 365 (580)
Q Consensus 297 ~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~-niv~~~~~~~~~~~~~l 365 (580)
.+.+|.|..+.||++... +++.++||....... .....+..|.++++.+.. + .+.+++.+. .+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence 467899999999999754 468899998643211 123556789999888742 3 344566543 445689
Q ss_pred EeeccCCC
Q 038098 366 VLEYMPHG 373 (580)
Q Consensus 366 v~e~~~~g 373 (580)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.94 E-value=4.5e-05 Score=75.76 Aligned_cols=138 Identities=17% Similarity=0.180 Sum_probs=79.8
Q ss_pred ceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCC--CCcceEEee------eecCCceeeEeec
Q 038098 298 NLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRH--RNIIKIISS------CSSDDFKALVLEY 369 (580)
Q Consensus 298 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~------~~~~~~~~lv~e~ 369 (580)
+.++.|..+.||+....+| .+++|+.... ......|.++++.+.. -.+.+++.. ....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 3466677899999987654 5999988642 2334445566555531 123444431 1235667899999
Q ss_pred cCCCChH-----H---------HhhcC--CC-----------CCCHHHHH------------------------------
Q 038098 370 MPHGSLE-----K---------CLYSS--NY-----------ILDIFQRL------------------------------ 392 (580)
Q Consensus 370 ~~~g~L~-----~---------~l~~~--~~-----------~~~~~~~~------------------------------ 392 (580)
++|.++. . .++.. .. ...|...+
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 0 11211 00 01222110
Q ss_pred -HHHHHHHHHHHHHhc----------CCCCCeEEecCCCCCEEeCCCCcEEEccccCcc
Q 038098 393 -NIMIDVASALEYLHF----------GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAK 440 (580)
Q Consensus 393 -~i~~~i~~~l~~Lh~----------~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~ 440 (580)
.+..++..++.+|+. .....++|||+++.||+++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111223345666652 125789999999999999888899999999875
No 426
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.90 E-value=5.4e-05 Score=73.26 Aligned_cols=78 Identities=13% Similarity=0.107 Sum_probs=58.0
Q ss_pred CCcCceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCC---CCcceEEeeeecCCceeeEeecc
Q 038098 294 FSENNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRH---RNIIKIISSCSSDDFKALVLEYM 370 (580)
Q Consensus 294 ~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~~~~~~~~~~~~~lv~e~~ 370 (580)
....+.+|.|..+.||+.+..+|+.|++|+...........+..|++.|+.+.- --+.+++++. ..++||||+
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l 92 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEee
Confidence 444577899999999999999999999998754444444568889999998842 2345566543 247899999
Q ss_pred CCCCh
Q 038098 371 PHGSL 375 (580)
Q Consensus 371 ~~g~L 375 (580)
+++..
T Consensus 93 ~~~~~ 97 (288)
T 3f7w_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred cccCC
Confidence 87643
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.82 E-value=2.7e-06 Score=74.79 Aligned_cols=83 Identities=12% Similarity=0.133 Sum_probs=49.2
Q ss_pred cccEEeCCCCcCCCCCCcccCCccccceecccccc-ccccCCcccccc----cccccccccccc-cCCCccccccccCcc
Q 038098 106 VLVQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNR-LQGSIPDSIGDL----INLKSLNLSNNN-LSGTIPISLEKLLDL 179 (580)
Q Consensus 106 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~~~~~~~~~~l~~L 179 (580)
.|+.||++++.++...-..+.++++|+.|+|++|. |++..-..+..+ ++|+.|+|++|. |++.--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34555555555554444455666777777777774 554333334432 357777777763 665444456667777
Q ss_pred cEEEccCCc
Q 038098 180 KDINVSFNK 188 (580)
Q Consensus 180 ~~l~l~~N~ 188 (580)
+.|++++++
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 777777664
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.78 E-value=0.00019 Score=69.86 Aligned_cols=136 Identities=15% Similarity=0.100 Sum_probs=92.3
Q ss_pred CceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcC---CCCcceEEeeeecCCceeeEeeccCCC
Q 038098 297 NNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIR---HRNIIKIISSCSSDDFKALVLEYMPHG 373 (580)
Q Consensus 297 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~g 373 (580)
.+.++.|....+|+.... ++.+++|+.... ....+..|.+.++.+. ...+.++++++...+..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 457899999999999864 678999987533 3466888999988884 366888999888888899999999987
Q ss_pred ChHH-----------HhhcCCC---------------------CCCHHHHH---HHHH----------------HHHHH-
Q 038098 374 SLEK-----------CLYSSNY---------------------ILDIFQRL---NIMI----------------DVASA- 401 (580)
Q Consensus 374 ~L~~-----------~l~~~~~---------------------~~~~~~~~---~i~~----------------~i~~~- 401 (580)
.+.. .++.... .-+|.... ++.. .+++.
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 6521 1222110 12454332 1111 11111
Q ss_pred HHHHh-cCCCCCeEEecCCCCCEEeCCCCcEEEcccc
Q 038098 402 LEYLH-FGYSVPIIHCDLKPSNVLLDDNMVAHLSDFG 437 (580)
Q Consensus 402 l~~Lh-~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 437 (580)
...|. ......++|+|+.+.|++++.++ +.|.|+.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 12332 12356799999999999999887 8899973
No 429
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.75 E-value=1e-05 Score=72.57 Aligned_cols=107 Identities=11% Similarity=0.125 Sum_probs=65.7
Q ss_pred hhCCCCCceeeCCCC-cCCcC----CCccccCCCCCcEEEcCCCCCCC-----CCCCCcCCCCCceEeCcCCcc------
Q 038098 36 LCRLAALFELDSGGN-KLDGF----VPACFGNLTNLRNLYLGSNKLTS-----IPSTLWNLKDILYLDLSSNFL------ 99 (580)
Q Consensus 36 ~~~l~~L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~l~~N~l~~-----lp~~~~~l~~L~~L~l~~n~l------ 99 (580)
+.+-+.|++|+|++| .|... +...+..-+.|+.|+|++|+|.. +...+..-+.|++|+|+.|.|
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 344566777777764 55421 22345556677777777777763 333444456777777777777
Q ss_pred ----cccCCCcccEEeCCCCc---CCCC----CCcccCCccccceecccccccc
Q 038098 100 ----LIGNLKVLVQVDLSMNN---FSDV----IPTTIGGLKDLQYLFLEYNRLQ 142 (580)
Q Consensus 100 ----~~~~l~~L~~L~l~~N~---l~~~----~~~~~~~l~~L~~L~l~~n~l~ 142 (580)
.+...+.|+.|+|++|. +... +...+..-+.|+.|+++.|.+.
T Consensus 117 ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 24455668888887653 3321 2234555678888888877654
No 430
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.67 E-value=7.9e-06 Score=73.26 Aligned_cols=107 Identities=14% Similarity=0.151 Sum_probs=64.5
Q ss_pred ccCCCCCcEEEcCCC-CCCC-----CCCCCcCCCCCceEeCcCCcc----------cccCCCcccEEeCCCCcCCCCC--
Q 038098 60 FGNLTNLRNLYLGSN-KLTS-----IPSTLWNLKDILYLDLSSNFL----------LIGNLKVLVQVDLSMNNFSDVI-- 121 (580)
Q Consensus 60 ~~~l~~L~~L~l~~N-~l~~-----lp~~~~~l~~L~~L~l~~n~l----------~~~~l~~L~~L~l~~N~l~~~~-- 121 (580)
+.+-+.|++|+|++| +|.. +...+..-+.|+.|+|++|.| .+...+.|++|+|++|.|....
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 455567777777774 6653 334455556777777777777 2345567777777777776432
Q ss_pred --CcccCCccccceecccccc---ccc----cCCcccccccccccccccccccC
Q 038098 122 --PTTIGGLKDLQYLFLEYNR---LQG----SIPDSIGDLINLKSLNLSNNNLS 166 (580)
Q Consensus 122 --~~~~~~l~~L~~L~l~~n~---l~~----~~p~~~~~l~~L~~L~l~~N~l~ 166 (580)
..++..-+.|+.|+|++|. +.. .+...+..-+.|+.|+++.|.+.
T Consensus 117 ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 2334455667777777543 222 12233445567777777766543
No 431
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.65 E-value=7.4e-06 Score=71.99 Aligned_cols=86 Identities=15% Similarity=0.084 Sum_probs=44.2
Q ss_pred CCCcEEEcCCCCCCCCC-CCCcCCCCCceEeCcCCcccccCCCcccEEeCCCCcCCCCCCcccCCc----cccceecccc
Q 038098 64 TNLRNLYLGSNKLTSIP-STLWNLKDILYLDLSSNFLLIGNLKVLVQVDLSMNNFSDVIPTTIGGL----KDLQYLFLEY 138 (580)
Q Consensus 64 ~~L~~L~l~~N~l~~lp-~~~~~l~~L~~L~l~~n~l~~~~l~~L~~L~l~~N~l~~~~~~~~~~l----~~L~~L~l~~ 138 (580)
-+|+.|+|+++.|+..- ..+.++++|++|+|++|. .++...-..++.+ ++|+.|+|++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~-----------------~ItD~gL~~L~~~~~~~~~L~~L~Ls~ 123 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCH-----------------YIEDGCLERLSQLENLQKSMLEMEIIS 123 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCT-----------------TCCHHHHHHHHTCHHHHHHCCEEEEES
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCC-----------------ccCHHHHHHHHhcccccCCCCEEEcCC
Confidence 45777777777665421 123344455444444443 2333222233332 3566666666
Q ss_pred cc-ccccCCcccccccccccccccccc-cC
Q 038098 139 NR-LQGSIPDSIGDLINLKSLNLSNNN-LS 166 (580)
Q Consensus 139 n~-l~~~~p~~~~~l~~L~~L~l~~N~-l~ 166 (580)
|. ||+..-..+..+++|+.|+|+++. ++
T Consensus 124 C~~ITD~Gl~~L~~~~~L~~L~L~~c~~It 153 (176)
T 3e4g_A 124 CGNVTDKGIIALHHFRNLKYLFLSDLPGVK 153 (176)
T ss_dssp CTTCCHHHHHHGGGCTTCCEEEEESCTTCC
T ss_pred CCcCCHHHHHHHhcCCCCCEEECCCCCCCC
Confidence 63 654333445566677777777664 44
No 432
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.63 E-value=0.00037 Score=62.67 Aligned_cols=102 Identities=15% Similarity=0.066 Sum_probs=69.4
Q ss_pred ChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCcccccc
Q 038098 374 SLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 453 (580)
Q Consensus 374 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 453 (580)
+|.++|...+.+++++++|.++.|.+++|.-.-. ...-..+=+.|..|++..+|.|.+.+ ..+.
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------- 97 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------- 97 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc-------------
Confidence 8999999999999999999999999999887721 11101222456899999999988764 1110
Q ss_pred cccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCC
Q 038098 454 TLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKP 493 (580)
Q Consensus 454 ~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p 493 (580)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0122467888763 3557788999999999998875555
No 433
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.53 E-value=0.00039 Score=71.13 Aligned_cols=80 Identities=10% Similarity=0.063 Sum_probs=48.7
Q ss_pred CCCeEEecCCCCCEEeCCCCcEEEccccCccccCCCCCcccccccccCCCcCCcccccCC---CCCCchhhHhHHHHHHH
Q 038098 410 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREG---QVSTNGDVYSFGIMLME 486 (580)
Q Consensus 410 ~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dvws~Gvil~e 486 (580)
...++|||+++.||+++.++ +.++||+.+..-.. ..........-...|++|+..... ......++.+.+..+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p-~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPM-GFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECH-HHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCch-HHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 67899999999999998876 99999998873211 000000000011235666554311 11223556688888888
Q ss_pred HHhCC
Q 038098 487 TFTRK 491 (580)
Q Consensus 487 lltg~ 491 (580)
.+++.
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87764
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.48 E-value=0.00061 Score=66.23 Aligned_cols=127 Identities=13% Similarity=0.132 Sum_probs=76.3
Q ss_pred CceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCc-ceEEeeeecCCceeeEeecc-CCCC
Q 038098 297 NNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNI-IKIISSCSSDDFKALVLEYM-PHGS 374 (580)
Q Consensus 297 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~-~~g~ 374 (580)
.+.|+.|....+|+. +.+++|+...... .......|+.+++.+....+ .+++++. .+.-++|+||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence 678889999999998 5689998754321 12234568888877743333 4566554 33457899999 6544
Q ss_pred hHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhc-----------------------------------------------
Q 038098 375 LEKCLYSSNYILDIFQRLNIMIDVASALEYLHF----------------------------------------------- 407 (580)
Q Consensus 375 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~----------------------------------------------- 407 (580)
+....... +..++.++++.|+-||.
T Consensus 95 l~~~~~~~--------~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 166 (301)
T 3dxq_A 95 MSPEKFKT--------RPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSAL 166 (301)
T ss_dssp CCHHHHHH--------STTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHH
T ss_pred CCHhhHhh--------hHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHH
Confidence 43200000 00112222222222221
Q ss_pred ---CCCCCeEEecCCCCCEEeCCCCcEEEccccCcc
Q 038098 408 ---GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAK 440 (580)
Q Consensus 408 ---~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~ 440 (580)
.....++|+|+.+.||+ ..++.+.++||..+.
T Consensus 167 ~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~ 201 (301)
T 3dxq_A 167 AAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSG 201 (301)
T ss_dssp HSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred HhcCCCceeeccCCCcCCEE-ECCCCEEEEeccccc
Confidence 12345899999999999 566788999999886
No 435
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.43 E-value=0.00042 Score=68.07 Aligned_cols=157 Identities=14% Similarity=0.176 Sum_probs=89.5
Q ss_pred ccCHHHHHHHhcCCCcC-----ceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCC--cceE
Q 038098 281 RFTYLEIFQATNGFSEN-----NLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRN--IIKI 353 (580)
Q Consensus 281 ~~~~~~~~~~~~~~~~~-----~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~ 353 (580)
.++..++......|... +.++.|....+|+....+| .+++|+.... .....+..|+.++..+.... +.++
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 34566676666667652 3456688889999987655 6889988642 12345566777777774222 3334
Q ss_pred Eeee------ecCCceeeEeeccCCCChHH-----H---------hhcC--C--CC----C---CHHHHHH---------
Q 038098 354 ISSC------SSDDFKALVLEYMPHGSLEK-----C---------LYSS--N--YI----L---DIFQRLN--------- 393 (580)
Q Consensus 354 ~~~~------~~~~~~~lv~e~~~~g~L~~-----~---------l~~~--~--~~----~---~~~~~~~--------- 393 (580)
+... ...+..+++++|++|..+.. + ++.. . .+ . .|...+.
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 3221 22355689999998865321 0 1211 0 00 1 1222110
Q ss_pred ---HHHHHHHHHHHHhc----CCCCCeEEecCCCCCEEeCCCCcEEEccccCcc
Q 038098 394 ---IMIDVASALEYLHF----GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAK 440 (580)
Q Consensus 394 ---i~~~i~~~l~~Lh~----~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~ 440 (580)
+...+.+.+++++. ....+++|+|+.+.||+++.++.+.|+||+.+.
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 00113344555542 224579999999999999987666899999875
No 436
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.38 E-value=0.00025 Score=59.29 Aligned_cols=35 Identities=29% Similarity=0.325 Sum_probs=16.8
Q ss_pred CCcEEEcCCCCCCCCCCC-CcCCCCCceEeCcCCcc
Q 038098 65 NLRNLYLGSNKLTSIPST-LWNLKDILYLDLSSNFL 99 (580)
Q Consensus 65 ~L~~L~l~~N~l~~lp~~-~~~l~~L~~L~l~~n~l 99 (580)
+|++|+|++|+|+.+|.. |..+++|++|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 345555555555555432 22445555555555544
No 437
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.32 E-value=0.0003 Score=58.80 Aligned_cols=34 Identities=24% Similarity=0.294 Sum_probs=17.6
Q ss_pred cEEeCCCCcCCCCCCcccCCccccceeccccccc
Q 038098 108 VQVDLSMNNFSDVIPTTIGGLKDLQYLFLEYNRL 141 (580)
Q Consensus 108 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l 141 (580)
+.|+|++|+|+.+.+..|..+++|+.|+|++|.+
T Consensus 34 ~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 34 TELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp SEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4445555555555455555555555555555544
No 438
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.25 E-value=0.00056 Score=70.05 Aligned_cols=72 Identities=18% Similarity=0.222 Sum_probs=49.3
Q ss_pred ceeccccCceEEEEEeCC--------CCEEEEEEEeccccchhhhHHHHHHHHhhcCCCC-cceEEeeeecCCceeeEee
Q 038098 298 NLIGRGGFGSVYKARIQD--------GMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRN-IIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 298 ~~lg~G~~g~v~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e 368 (580)
+.|+.|....+|+....+ ++.+++|+.... .....+..|..+++.+...+ ..++++.+.. .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 567888889999998653 578999987431 11145557888888885333 3567776643 38999
Q ss_pred ccCCCCh
Q 038098 369 YMPHGSL 375 (580)
Q Consensus 369 ~~~~g~L 375 (580)
|++|.++
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986443
No 439
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.23 E-value=0.0023 Score=63.07 Aligned_cols=138 Identities=12% Similarity=0.090 Sum_probs=73.8
Q ss_pred ceeccccCce-EEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCC--CCcceEEeeeecCCceeeEeeccCCCC
Q 038098 298 NLIGRGGFGS-VYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRH--RNIIKIISSCSSDDFKALVLEYMPHGS 374 (580)
Q Consensus 298 ~~lg~G~~g~-v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~g~ 374 (580)
+.++.|.... +|+....+|+.+++|...... ...+..|+.+++.+.. -.+.+++.+....+ +++||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 3455554444 667765446778887643321 1344567777777642 23556776644333 78999997766
Q ss_pred hHHHhhcCC-------------------------CCCCHHHHH-------H-H------------HHHHHHHHHHHh---
Q 038098 375 LEKCLYSSN-------------------------YILDIFQRL-------N-I------------MIDVASALEYLH--- 406 (580)
Q Consensus 375 L~~~l~~~~-------------------------~~~~~~~~~-------~-i------------~~~i~~~l~~Lh--- 406 (580)
+.+++.... ..++..... . + ...+...++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 654432110 012221110 0 0 001112222221
Q ss_pred cCCCCCeEEecCCCCCEEeCCC----CcEEEccccCcc
Q 038098 407 FGYSVPIIHCDLKPSNVLLDDN----MVAHLSDFGMAK 440 (580)
Q Consensus 407 ~~~~~~i~H~dlk~~Nill~~~----~~~kl~Dfg~a~ 440 (580)
......++|||+.+.||+++.+ +.+.|+||+.+.
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~ 216 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAK 216 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcC
Confidence 1125679999999999999874 689999999886
No 440
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.14 E-value=0.0065 Score=59.57 Aligned_cols=156 Identities=13% Similarity=0.109 Sum_probs=88.9
Q ss_pred ccCHHHHHHHhcCCCc-----CceeccccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcCCCC--cceE
Q 038098 281 RFTYLEIFQATNGFSE-----NNLIGRGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRN--IIKI 353 (580)
Q Consensus 281 ~~~~~~~~~~~~~~~~-----~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~ 353 (580)
.++.+++......|.. ...++ |....||+....+|+.+++|+..... .....+..|..+++.+.... +.++
T Consensus 10 ~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~ 87 (328)
T 1zyl_A 10 TLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAP 87 (328)
T ss_dssp CCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCC
T ss_pred CCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecce
Confidence 3455555554444432 23566 88889999887778889999986331 12356667888887774222 3444
Q ss_pred Eee-----eecCCceeeEeeccCCCChH-----HH---------hhc----C----CCCCCHHHH---------------
Q 038098 354 ISS-----CSSDDFKALVLEYMPHGSLE-----KC---------LYS----S----NYILDIFQR--------------- 391 (580)
Q Consensus 354 ~~~-----~~~~~~~~lv~e~~~~g~L~-----~~---------l~~----~----~~~~~~~~~--------------- 391 (580)
+.. ....+..++||||++|..+. .+ ++. . ....++...
T Consensus 88 ~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (328)
T 1zyl_A 88 VAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIP 167 (328)
T ss_dssp CCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSC
T ss_pred eecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCC
Confidence 443 11234557899999875432 11 111 0 011222211
Q ss_pred -------HHHHHHHHHHHHHHhc-CCCCCeEEecCCCCCEEeCCCCcEEEccccCcc
Q 038098 392 -------LNIMIDVASALEYLHF-GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAK 440 (580)
Q Consensus 392 -------~~i~~~i~~~l~~Lh~-~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~ 440 (580)
...+..++..+..+-. .....++|||+++.||+++ + .+.|+||+.+.
T Consensus 168 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 168 SGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 0111122222222211 1245688999999999999 4 89999998876
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.13 E-value=0.0019 Score=66.52 Aligned_cols=74 Identities=15% Similarity=0.145 Sum_probs=48.5
Q ss_pred CceeccccCceEEEEEeCC-CCEEEEEEEeccccchhhhHHHHHHHHhhcCCCCc-ceEEeeeecCCceeeEeeccCCCC
Q 038098 297 NNLIGRGGFGSVYKARIQD-GMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRNI-IKIISSCSSDDFKALVLEYMPHGS 374 (580)
Q Consensus 297 ~~~lg~G~~g~v~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~g~ 374 (580)
.+.|+.|-...+|+....+ +..+++|+...... ..-.-..|..+++.+...++ .++++++.. .+||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCcc
Confidence 3568888889999998764 47889998743321 11222578899998865444 567777632 35999998754
Q ss_pred h
Q 038098 375 L 375 (580)
Q Consensus 375 L 375 (580)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 442
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.13 E-value=0.002 Score=64.39 Aligned_cols=138 Identities=14% Similarity=0.163 Sum_probs=82.7
Q ss_pred ceeccccCceEEEEEeC--------CCCEEEEEEEeccccchhhhHHHHHHHHhhcC-CCCcceEEeeeecCCceeeEee
Q 038098 298 NLIGRGGFGSVYKARIQ--------DGMEVAVKVFDLQYGRAFKSFDIECDMIKRIR-HRNIIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 298 ~~lg~G~~g~v~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e 368 (580)
+.+..|-...+|+.... +++.+++|+.... ........+|.++++.+. +.-..++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 56777888899998864 2478999985322 223455668999988884 3334567777654 38999
Q ss_pred ccCCCChHHH-----------------hhcCC----CCCC--HHHHHHHHHHHHH-------------------HHHHHh
Q 038098 369 YMPHGSLEKC-----------------LYSSN----YILD--IFQRLNIMIDVAS-------------------ALEYLH 406 (580)
Q Consensus 369 ~~~~g~L~~~-----------------l~~~~----~~~~--~~~~~~i~~~i~~-------------------~l~~Lh 406 (580)
|++|.++..- ++... .... +.++.++..++.. .+..|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9988655311 11111 1122 3444445444322 122322
Q ss_pred -----cCCCCCeEEecCCCCCEEeCCC----CcEEEccccCcc
Q 038098 407 -----FGYSVPIIHCDLKPSNVLLDDN----MVAHLSDFGMAK 440 (580)
Q Consensus 407 -----~~~~~~i~H~dlk~~Nill~~~----~~~kl~Dfg~a~ 440 (580)
......++|+|+.+.||+++.+ +.+.++||.++.
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 1224568899999999999876 789999999886
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.89 E-value=0.0019 Score=64.80 Aligned_cols=73 Identities=10% Similarity=0.192 Sum_probs=44.7
Q ss_pred ceeccccCceEEEEEeCC---------CCEEEEEEEeccccchhhhHHHHHHHHhhcCCCC-cceEEeeeecCCceeeEe
Q 038098 298 NLIGRGGFGSVYKARIQD---------GMEVAVKVFDLQYGRAFKSFDIECDMIKRIRHRN-IIKIISSCSSDDFKALVL 367 (580)
Q Consensus 298 ~~lg~G~~g~v~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~ 367 (580)
+.++.|....+|+....+ ++.+++|+..... ........|.++++.+...+ +.++++... -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DELYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GGTSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cceecHHHHHHHHHHHHhcCCCCceEEecC----CcEEE
Confidence 467788888999998653 2688888864332 11223467888888875333 446665542 36899
Q ss_pred eccCCCCh
Q 038098 368 EYMPHGSL 375 (580)
Q Consensus 368 e~~~~g~L 375 (580)
||++|.++
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987543
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.60 E-value=0.018 Score=56.82 Aligned_cols=67 Identities=15% Similarity=0.147 Sum_probs=43.4
Q ss_pred cccCceEEEEEeCCCCEEEEEEEeccccchhhhHHHHHHHHhhcC---CCCcceEEee------eecCCceeeEeeccCC
Q 038098 302 RGGFGSVYKARIQDGMEVAVKVFDLQYGRAFKSFDIECDMIKRIR---HRNIIKIISS------CSSDDFKALVLEYMPH 372 (580)
Q Consensus 302 ~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~------~~~~~~~~lv~e~~~~ 372 (580)
.|....||+....+| .+++|+...... ..|+..++.+. -|.+.+++.. ....+..++||||++|
T Consensus 33 ~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G 105 (339)
T 3i1a_A 33 ADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHA 105 (339)
T ss_dssp SCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCC
T ss_pred CccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCC
Confidence 333679999987767 999998754321 34666666553 2335555543 2334667899999998
Q ss_pred CCh
Q 038098 373 GSL 375 (580)
Q Consensus 373 g~L 375 (580)
..+
T Consensus 106 ~~~ 108 (339)
T 3i1a_A 106 PNG 108 (339)
T ss_dssp CBT
T ss_pred CcC
Confidence 755
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.46 E-value=0.01 Score=59.56 Aligned_cols=139 Identities=15% Similarity=0.167 Sum_probs=82.2
Q ss_pred ceeccccCceEEEEEeCC--------CCEEEEEEEeccccc------------------hhhhHHHHHHHHhhcC-CCCc
Q 038098 298 NLIGRGGFGSVYKARIQD--------GMEVAVKVFDLQYGR------------------AFKSFDIECDMIKRIR-HRNI 350 (580)
Q Consensus 298 ~~lg~G~~g~v~~~~~~~--------~~~vavK~~~~~~~~------------------~~~~~~~e~~~l~~l~-h~ni 350 (580)
+.+..|-...+|+....+ ++.|.+++....... ..+....|..+++.+. +--.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456668888999988653 367888887432111 0112234888888874 4445
Q ss_pred ceEEeeeecCCceeeEeeccCCCChHH--H---------------hhcCC----CCCC--HHHHHHHHHHHH--------
Q 038098 351 IKIISSCSSDDFKALVLEYMPHGSLEK--C---------------LYSSN----YILD--IFQRLNIMIDVA-------- 399 (580)
Q Consensus 351 v~~~~~~~~~~~~~lv~e~~~~g~L~~--~---------------l~~~~----~~~~--~~~~~~i~~~i~-------- 399 (580)
.++++++.. .+|+||++|-+|.. + ++... .... +....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 677777653 28999998754421 1 11111 1122 223333433321
Q ss_pred --------------HHH----HHHh-cCCCCCeEEecCCCCCEEeCCC------CcEEEccccCcc
Q 038098 400 --------------SAL----EYLH-FGYSVPIIHCDLKPSNVLLDDN------MVAHLSDFGMAK 440 (580)
Q Consensus 400 --------------~~l----~~Lh-~~~~~~i~H~dlk~~Nill~~~------~~~kl~Dfg~a~ 440 (580)
.-+ .+|. ......++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 2232 1224568899999999999876 789999998876
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=96.04 E-value=0.018 Score=58.47 Aligned_cols=137 Identities=14% Similarity=0.185 Sum_probs=83.2
Q ss_pred ceeccccCceEEEEEeCC--------CCEEEEEEEeccccchhhhHHHHHHHHhhcC-CCCcceEEeeeecCCceeeEee
Q 038098 298 NLIGRGGFGSVYKARIQD--------GMEVAVKVFDLQYGRAFKSFDIECDMIKRIR-HRNIIKIISSCSSDDFKALVLE 368 (580)
Q Consensus 298 ~~lg~G~~g~v~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e 368 (580)
+.+..|-...+|+....+ ++.+++|+..... ...-.-.+|..+++.+. +.-..++++.+. -++|+|
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence 567778888999998753 5789999864322 22233467888888874 333456665442 378999
Q ss_pred ccCCCChHH-------H----------hhc------------CCCCCCHHHHHHHHHHH-------------------HH
Q 038098 369 YMPHGSLEK-------C----------LYS------------SNYILDIFQRLNIMIDV-------------------AS 400 (580)
Q Consensus 369 ~~~~g~L~~-------~----------l~~------------~~~~~~~~~~~~i~~~i-------------------~~ 400 (580)
|++|.+|.. . ++. .+.+.-+.++.++..++ ..
T Consensus 151 fI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 230 (424)
T 3mes_A 151 FIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILE 230 (424)
T ss_dssp CCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHH
T ss_pred EeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHH
Confidence 999865421 0 010 01111233333333222 12
Q ss_pred HHHHHh---------------------cCCCCCeEEecCCCCCEEeCCCCcEEEccccCcc
Q 038098 401 ALEYLH---------------------FGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAK 440 (580)
Q Consensus 401 ~l~~Lh---------------------~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~ 440 (580)
.+.+|. ......++|+|+.+.||+ +.++.+.++||.+|.
T Consensus 231 e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~ 290 (424)
T 3mes_A 231 EIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSA 290 (424)
T ss_dssp HHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred HHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCC
Confidence 233332 112356889999999999 888899999999886
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.61 E-value=0.31 Score=49.01 Aligned_cols=29 Identities=28% Similarity=0.400 Sum_probs=24.8
Q ss_pred CeEEecCCCCCEEe------CCCCcEEEccccCcc
Q 038098 412 PIIHCDLKPSNVLL------DDNMVAHLSDFGMAK 440 (580)
Q Consensus 412 ~i~H~dlk~~Nill------~~~~~~kl~Dfg~a~ 440 (580)
.++|+|+.+.||++ +++..+.++||.+|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 35699999999999 456779999999886
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=90.47 E-value=0.46 Score=30.37 Aligned_cols=23 Identities=22% Similarity=0.335 Sum_probs=8.9
Q ss_pred hhhhhHHHHHHHHHHHHHhhhhc
Q 038098 240 GIVLPLSTIFMMAVILFILRYRK 262 (580)
Q Consensus 240 ~~~~~~~~~~~~~vi~~i~~~~~ 262 (580)
+++.+++.+++++..++++++||
T Consensus 16 gVVgGv~~~~ii~~~~~~~~RRr 38 (44)
T 2ks1_B 16 GMVGALLLLLVVALGIGLFMRRR 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ehhHHHHHHHHHHHHHHHHhhhh
Confidence 34433443333333334433333
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=88.25 E-value=1.3 Score=39.74 Aligned_cols=121 Identities=12% Similarity=0.127 Sum_probs=80.4
Q ss_pred CCCCcceEEeeeecCCceeeEeeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCCCEEe
Q 038098 346 RHRNIIKIISSCSSDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL 425 (580)
Q Consensus 346 ~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i~H~dlk~~Nill 425 (580)
.||+.+.. ..-.+++...+.|+.-+ +...|-.- ...+...+++++.+|+....+++ .+ +|--+.|+|+++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~i--k~~~~~eKlr~l~ni~~l~~~~~---~r--~tf~L~P~NL~f 112 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDNI--KSFTKNEKLRYLLNIKNLEEVNR---TR--YTFVLAPDELFF 112 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGGG--GGSCHHHHHHHHHHGGGGGGGGG---SS--EECCCSGGGEEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHHH--HhcCHHHHHHHHHHHHHHHHHhc---Cc--eEEEEecceEEE
Confidence 57887765 45555666555555433 23332221 23788999999999999886666 33 577899999999
Q ss_pred CCCCcEEEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCccccC
Q 038098 426 DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEIFFG 500 (580)
Q Consensus 426 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~~~~~ 500 (580)
+.++.+++.=.|+-..+ +|. ..++..=.-.+=+++..+++++..|+....|
T Consensus 113 ~~~~~p~i~~RGik~~l-------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~l~~G 163 (215)
T 4ann_A 113 TRDGLPIAKTRGLQNVV-------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFDALVEG 163 (215)
T ss_dssp CTTSCEEESCCEETTTB-------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHHHHHS
T ss_pred cCCCCEEEEEccCccCC-------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHHHHcC
Confidence 99999999877764422 121 1122223446778889999999998764333
No 450
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=84.44 E-value=1 Score=28.69 Aligned_cols=27 Identities=22% Similarity=0.367 Sum_probs=10.7
Q ss_pred cceehhhhhHHHHHHHHHHHHHhhhhc
Q 038098 236 DLLIGIVLPLSTIFMMAVILFILRYRK 262 (580)
Q Consensus 236 ~~ii~~~~~~~~~~~~~vi~~i~~~~~ 262 (580)
..+++.+++++++++++.+++++.+||
T Consensus 12 ~~Ia~~vVGvll~vi~~l~~~~~~RRR 38 (44)
T 2jwa_A 12 TSIISAVVGILLVVVLGVVFGILIKRR 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHhheehh
Confidence 334444444333333333333333333
No 451
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=81.10 E-value=6 Score=35.48 Aligned_cols=115 Identities=12% Similarity=0.134 Sum_probs=76.5
Q ss_pred CCCCcceEEeeeecCCceeeEeeccCCC-ChHHHhhcCCCCCCHHHHHHHHHHHHHHHH-HHhcCCCCCeEEecCCCCCE
Q 038098 346 RHRNIIKIISSCSSDDFKALVLEYMPHG-SLEKCLYSSNYILDIFQRLNIMIDVASALE-YLHFGYSVPIIHCDLKPSNV 423 (580)
Q Consensus 346 ~h~niv~~~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~-~Lh~~~~~~i~H~dlk~~Ni 423 (580)
.||++ -...-.+++...+.++.-+++ ++.. + ...+...+++++.+|+.... +++ .-+|--+.|+|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~-i----~~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAA-I----RKTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHH-H----HTSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHH-H----HhcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceE
Confidence 57887 333446667776666664332 3332 3 23788999999999988776 555 335677899999
Q ss_pred EeCCCCcEEEccccCccccCCCCCcccccccccCCCcCCcccccCCCCCCchhhHhHHHHHHHHHhCCCCCCc
Q 038098 424 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDE 496 (580)
Q Consensus 424 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws~Gvil~elltg~~p~~~ 496 (580)
++|.++.+++.-.|+-..+ +|.- .++..=.-.+=+++..++.++..|+.
T Consensus 116 ~f~~~~~p~i~hRGi~~~l-------------------pP~e-----~~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKESL-------------------PPDE-----WDDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp EECTTCCEEESCCEETTTB-------------------SSCS-----CCHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred EEeCCCcEEEEEcCCcccC-------------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 9999999999877764322 2221 11122234667888889999888754
No 452
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=79.98 E-value=2.8 Score=26.73 Aligned_cols=17 Identities=12% Similarity=0.256 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHHhhhh
Q 038098 245 LSTIFMMAVILFILRYR 261 (580)
Q Consensus 245 ~~~~~~~~vi~~i~~~~ 261 (580)
++.+++++..++++++|
T Consensus 20 v~~v~ii~~~~~~~~RR 36 (44)
T 2l2t_A 20 LFILVIVGLTFAVYVRR 36 (44)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 33333333333333333
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=78.53 E-value=4.8 Score=31.14 Aligned_cols=46 Identities=17% Similarity=0.162 Sum_probs=22.2
Q ss_pred CCCCCchhhhCCCCCceeeCCCCcCCcCCCccccCCCCCcEEEcCCC
Q 038098 28 LEGSIPDDLCRLAALFELDSGGNKLDGFVPACFGNLTNLRNLYLGSN 74 (580)
Q Consensus 28 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 74 (580)
++.+-..+|.++.+|+.+.|-.+ ++.+...+|.++.+|+.+.+...
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 33334444555555555555433 33344455555555555555443
No 454
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=78.30 E-value=1.7 Score=26.85 Aligned_cols=16 Identities=6% Similarity=0.081 Sum_probs=8.3
Q ss_pred CcceehhhhhHHHHHH
Q 038098 235 NDLLIGIVLPLSTIFM 250 (580)
Q Consensus 235 ~~~ii~~~~~~~~~~~ 250 (580)
...+.+++++.+..++
T Consensus 10 ~GaIAGiVvG~v~gv~ 25 (38)
T 2k1k_A 10 GGEIVAVIFGLLLGAA 25 (38)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred CCceeeeehHHHHHHH
Confidence 3445566665554443
No 455
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=75.32 E-value=0.35 Score=49.56 Aligned_cols=60 Identities=10% Similarity=0.023 Sum_probs=17.1
Q ss_pred cCceeccccCceEEEEEeCC-CCEEEE------EEEeccc--cchhhhHHHHHHHHhhcCCCCcceEEeeee
Q 038098 296 ENNLIGRGGFGSVYKARIQD-GMEVAV------KVFDLQY--GRAFKSFDIECDMIKRIRHRNIIKIISSCS 358 (580)
Q Consensus 296 ~~~~lg~G~~g~v~~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 358 (580)
..+.+| ||.||+|.+.. ..+||| |...... .+....+.+|..++...+|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 345666 99999998763 367888 6654321 223356778888899999999999987653
No 456
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=72.20 E-value=5 Score=31.00 Aligned_cols=45 Identities=13% Similarity=0.027 Sum_probs=19.8
Q ss_pred cccCCCcccCCCCCCCEEeccCCcCCCCCchhhhCCCCCceeeCCC
Q 038098 4 LNGSIPIAVGKLQKLQLLSLEDNQLEGSIPDDLCRLAALFELDSGG 49 (580)
Q Consensus 4 ~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 49 (580)
++.+-..+|.++++|+.+.|-.+ ++.+-..+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 34444444444444444444442 2223344444444444444443
No 457
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=48.22 E-value=1.5e+02 Score=31.48 Aligned_cols=45 Identities=27% Similarity=0.226 Sum_probs=31.9
Q ss_pred HHHHHHHHHHH--HHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCcc
Q 038098 389 FQRLNIMIDVA--SALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAK 440 (580)
Q Consensus 389 ~~~~~i~~~i~--~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~ 440 (580)
..+..++.++| +.+.|+= .. ||=.++|||++.+|.+.=+|||.+.
T Consensus 529 ~ar~nF~~SlA~~Svv~YIL---Gl----GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLL---GV----GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---TC----CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHc---cC----CCCCCcceEEeCCCCEEEEeehhhh
Confidence 34445555543 2345544 22 6888999999999999999999875
No 458
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=47.17 E-value=1.7e+02 Score=30.59 Aligned_cols=81 Identities=14% Similarity=0.125 Sum_probs=48.4
Q ss_pred eEEeeeecCCceeeEeeccCCCChHHHh----------hcCCC------CCCHHHHHHHHHHHHH--HHHHHhcCCCCCe
Q 038098 352 KIISSCSSDDFKALVLEYMPHGSLEKCL----------YSSNY------ILDIFQRLNIMIDVAS--ALEYLHFGYSVPI 413 (580)
Q Consensus 352 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l----------~~~~~------~~~~~~~~~i~~~i~~--~l~~Lh~~~~~~i 413 (580)
+.+.+........+ .|++++.++.+.+ ..... ...+..+..++...|- .+.|+= ..
T Consensus 403 ~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YIL---Gi-- 476 (614)
T 3ls8_A 403 TPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYIL---GV-- 476 (614)
T ss_dssp CCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHH---TC--
T ss_pred eccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheee---ec--
Confidence 34445544444443 5777665554443 32111 1224555555555443 455555 22
Q ss_pred EEecCCCCCEEeCCCCcEEEccccCcc
Q 038098 414 IHCDLKPSNVLLDDNMVAHLSDFGMAK 440 (580)
Q Consensus 414 ~H~dlk~~Nill~~~~~~kl~Dfg~a~ 440 (580)
||=.++|||++.+|.+.=+|||...
T Consensus 477 --gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 477 --GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp --CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred --cCCCCcceeEcCCCCEeeeehHHhh
Confidence 5778999999999999999999874
No 459
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=31.49 E-value=1.7e+02 Score=32.94 Aligned_cols=61 Identities=18% Similarity=0.102 Sum_probs=39.8
Q ss_pred CChHHHhhcCCCCCCHHHH-HHHHHHHH--HHHHHHhcCCCCCeEEecCCCCCEEeCCCCcEEEccccCcc
Q 038098 373 GSLEKCLYSSNYILDIFQR-LNIMIDVA--SALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAK 440 (580)
Q Consensus 373 g~L~~~l~~~~~~~~~~~~-~~i~~~i~--~~l~~Lh~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg~a~ 440 (580)
+.|.+|+........+..+ ..++...| +.+.|+= .. ||=.++|||++.+|.+.=+|||.+.
T Consensus 898 ~~L~~~f~~~~~~~~~~~ar~nF~~S~A~ysvv~YiL---gi----gDRH~~NILid~tG~v~HIDFG~~f 961 (1091)
T 3hhm_A 898 HTLHQWLKDKNKGEIYDAAIDLFTRSCAGYCVATFIL---GI----GDRHNSNIMVKDDGQLFHIDFGHFL 961 (1091)
T ss_dssp THHHHHHHTTSCTTSHHHHHHHHHHHHHHHHHHHHHH---TC----CCCCTTTEEEETTSCEEECCCCCCS
T ss_pred hHHHHHHHhcCChHHHHHHHHHHHHHhhhhhheEEEE---ee----cCCCCcceEEeCCCCEEEEeehhhh
Confidence 3466666554433445543 34444443 2355554 22 5778999999999999999999875
No 460
>3pk1_B Apoptosis regulator BAX; BCL-2 family fold, regulation of apoptosis, mitochondri apoptosis-apoptosis regulator complex; 2.49A {Homo sapiens} PDB: 3pl7_C 2xa0_C
Probab=22.75 E-value=1e+02 Score=18.02 Aligned_cols=21 Identities=29% Similarity=0.360 Sum_probs=18.5
Q ss_pred CCHHHHHHHHHHHHHHHHhhh
Q 038098 558 INAKEIVTRLLKIRDSLLKNV 578 (580)
Q Consensus 558 ps~~ev~~~L~~~~~~~~~~~ 578 (580)
|+.+++++.|.+|-+++.++.
T Consensus 7 p~~K~l~~cL~~IgDEld~N~ 27 (34)
T 3pk1_B 7 ASTKKLSECLKRIGDELDSNM 27 (34)
T ss_dssp CTHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHcccH
Confidence 889999999999999988764
No 461
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=22.65 E-value=1.5e+02 Score=28.27 Aligned_cols=76 Identities=18% Similarity=0.149 Sum_probs=41.6
Q ss_pred ceeeEeeccCCCChHHHhhcC-CCCCCHHHHHHHHHHH--HHHHHHHhcCCCC-CeE-EecCCCCCEEeCCCCc-EEEcc
Q 038098 362 FKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDV--ASALEYLHFGYSV-PII-HCDLKPSNVLLDDNMV-AHLSD 435 (580)
Q Consensus 362 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i--~~~l~~Lh~~~~~-~i~-H~dlk~~Nill~~~~~-~kl~D 435 (580)
..+++|||++|..|.+.-... ...+.. +.+.++ +-+++.+..+..+ +.+ +.--.++|||+++++. +.++|
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~ID 231 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSAPEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPID 231 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSHHHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECS
T ss_pred cceehhhhcCCCccccchhhhhhhhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEc
Confidence 455999999876655421110 011222 233333 2345555544333 221 1224789999986554 89999
Q ss_pred ccCccc
Q 038098 436 FGMAKP 441 (580)
Q Consensus 436 fg~a~~ 441 (580)
-+.+..
T Consensus 232 hn~af~ 237 (342)
T 1cja_A 232 SKIIPL 237 (342)
T ss_dssp CCCCCC
T ss_pred CCcccc
Confidence 998863
Done!