BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038099
(250 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2CYG|A Chain A, Crystal Structure At 1.45- Resolution Of The Major
Allergen Endo-Beta-1,3-Glucanase Of Banana As A
Molecular Basis For The Latex-Fruit Syndrome
Length = 312
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 133/225 (59%), Gaps = 8/225 (3%)
Query: 27 VGVCYGQLGNNLPSPQESVELMIKSLKATRVKIYDANPKILKALKNIDIQVSIMVPNEII 86
+GVCYG LGNNLP P E V L KS R+++YD N L+AL+N +IQV + VP +
Sbjct: 1 IGVCYGMLGNNLPPPSEVVSLY-KSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDV 59
Query: 87 NNISLSSQTLSDQWVRTNVLPYLPGTKIRYLLVGNEILSLPDKSIWPNLVPAMRKIRKSL 146
+++ S+ + + W+R NV+ Y P RY+ VGNE+ +P + ++PAMR I +L
Sbjct: 60 QSLA-SNPSAAGDWIRRNVVAYWPSVSFRYIAVGNEL--IPGSDLAQYILPAMRNIYNAL 116
Query: 147 KTLGAR-KIKVGTPSAMDVLQSSFPPSNGTFRSDISESVMRPMLHFLNRTKSFFFVDAYT 205
+ G + +IKV T VL +S+PPS G F S +++ + P++ FL + V+ Y
Sbjct: 117 SSAGLQNQIKVSTAVDTGVLGTSYPPSAGAF-SSAAQAYLSPIVQFLASNGAPLLVNVYP 175
Query: 206 FFPWSSDPKNIHLDYALLESTNITYTDPVTKLTYTNLFDQMLDAV 250
+F ++ +P I L YAL ++ + D + +Y NLFD ++DAV
Sbjct: 176 YFSYTGNPGQISLPYALFTASGVVVQD--GRFSYQNLFDAIVDAV 218
>pdb|3EM5|A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev
B 2), A Major Allergen From Hevea Brasiliensis
pdb|3EM5|B Chain B, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev
B 2), A Major Allergen From Hevea Brasiliensis
pdb|3EM5|C Chain C, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev
B 2), A Major Allergen From Hevea Brasiliensis
pdb|3EM5|D Chain D, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev
B 2), A Major Allergen From Hevea Brasiliensis
pdb|3F55|A Chain A, Crystal Structure Of The Native Endo Beta-1,3-Glucanase
(Hev B 2), A Major Allergen From Hevea Brasiliensis
(Space Group P41)
pdb|3F55|B Chain B, Crystal Structure Of The Native Endo Beta-1,3-Glucanase
(Hev B 2), A Major Allergen From Hevea Brasiliensis
(Space Group P41)
pdb|3F55|C Chain C, Crystal Structure Of The Native Endo Beta-1,3-Glucanase
(Hev B 2), A Major Allergen From Hevea Brasiliensis
(Space Group P41)
pdb|3F55|D Chain D, Crystal Structure Of The Native Endo Beta-1,3-Glucanase
(Hev B 2), A Major Allergen From Hevea Brasiliensis
(Space Group P41)
Length = 316
Score = 143 bits (361), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 134/227 (59%), Gaps = 9/227 (3%)
Query: 27 VGVCYGQLGNNLPSPQESVELMIKSLKATRVKIYDANPKILKALKNIDIQVSIMVPNEII 86
VGVCYG GNNLP E + L KS TR++IYD N +L+AL+ +I++ + VPN +
Sbjct: 2 VGVCYGMQGNNLPPVSEVIALYKKS-NITRMRIYDPNQAVLEALRGSNIELILGVPNSDL 60
Query: 87 NNISLSSQTLSDQWVRTNVLPYLPGTKIRYLLVGNEILSLPDKSIW--PNLVPAMRKIRK 144
SL++ + + WV+ NV + + RY+ VGNEI + + W ++PAMR I
Sbjct: 61 Q--SLTNPSNAKSWVQKNVRGFWSSVRFRYIAVGNEISPVNRGTAWLAQFVLPAMRNIHD 118
Query: 145 SLKTLGAR-KIKVGTPSAMDVLQSSFPPSNGTFRSDISESVMRPMLHFLNRTKSFFFVDA 203
++++ G + +IKV T + ++ +S+PPS G FR D+ S + P++ FL+ +S +
Sbjct: 119 AIRSAGLQDQIKVSTAIDLTLVGNSYPPSAGAFRDDV-RSYLNPIIRFLSSIRSPLLANI 177
Query: 204 YTFFPWSSDPKNIHLDYALLESTNITYTDPVTKLTYTNLFDQMLDAV 250
Y +F ++ +P++I L YAL S ++ D + Y NLFD LDA+
Sbjct: 178 YPYFTYAGNPRDISLPYALFTSPSVVVWD--GQRGYKNLFDATLDAL 222
>pdb|1GHS|A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan
Endohydrolases With Distinct Substrate Specificities
pdb|1GHS|B Chain B, The Three-Dimensional Structures Of Two Plant Beta-Glucan
Endohydrolases With Distinct Substrate Specificities
Length = 306
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 123/224 (54%), Gaps = 11/224 (4%)
Query: 27 VGVCYGQLGNNLPSPQESVELMIKSLKATRVKIYDANPKILKALKNIDIQVSIMVPNEII 86
+GVCYG +GNNLPS + V+L +S ++IY A+ + L AL+N I + + + N+ +
Sbjct: 1 IGVCYGVIGNNLPSRSDVVQLY-RSKGINGMRIYFADGQALSALRNSGIGLILDIGNDQL 59
Query: 87 NNISLSSQTLSDQWVRTNVLPYLPGTKIRYLLVGNEILSLPDKSIWPNLVPAMRKIRKSL 146
NI+ S+ + WV+ NV PY P I+Y+ GNE+ +SI +PAMR + +L
Sbjct: 60 ANIAASTSNAA-SWVQNNVRPYYPAVNIKYIAAGNEVQGGATQSI----LPAMRNLNAAL 114
Query: 147 KTLGARKIKVGTPSAMDVLQSSFPPSNGTFRSDISESVMRPMLHFLNRTKSFFFVDAYTF 206
G IKV T D + +SFPPS G F++ + M + L T + + Y +
Sbjct: 115 SAAGLGAIKVSTSIRFDEVANSFPPSAGVFKN----AYMTDVARLLASTGAPLLANVYPY 170
Query: 207 FPWSSDPKNIHLDYALLESTNITYTDPVTKLTYTNLFDQMLDAV 250
F + +P +I L+YA + T D LTYT+LFD M+DAV
Sbjct: 171 FAYRDNPGSISLNYATFQ-PGTTVRDQNNGLTYTSLFDAMVDAV 213
>pdb|1AQ0|A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group
pdb|1AQ0|B Chain B, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group
pdb|1GHR|A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan
Endohydrolases With Distinct Substrate Specificities
Length = 306
Score = 123 bits (309), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 114/223 (51%), Gaps = 10/223 (4%)
Query: 27 VGVCYGQLGNNLPSPQESVELMIKSLKATRVKIYDANPKILKALKNIDIQVSIMVPNEII 86
+GVCYG NNLP+ V M KS +++Y N L+A+ I V + PN+++
Sbjct: 1 IGVCYGMSANNLPAASTVVS-MFKSNGIKSMRLYAPNQAALQAVGGTGINVVVGAPNDVL 59
Query: 87 NNISLSSQTLSDQWVRTNVLPYLPGTKIRYLLVGNEILSLPDKSIWPNLVPAMRKIRKSL 146
+N++ S + WV++N+ Y P RY+ VGNE+ + NLVPAM+ + +L
Sbjct: 60 SNLAASPAAAA-SWVKSNIQAY-PKVSFRYVCVGNEVAGGATR----NLVPAMKNVHGAL 113
Query: 147 KTLGARKIKVGTPSAMDVLQSSFPPSNGTFRSDISESVMRPMLHFLNRTKSFFFVDAYTF 206
G IKV T + +L PPS G+F + + + M P++ FL RT + + Y +
Sbjct: 114 VAAGLGHIKVTTSVSQAILGVFSPPSAGSFTGE-AAAFMGPVVQFLARTNAPLMANIYPY 172
Query: 207 FPWSSDPKNIHLDYALLESTNITYTDPVTKLTYTNLFDQMLDA 249
W+ +P + + YAL ++ D Y NLFD +DA
Sbjct: 173 LAWAYNPSAMDMGYALFNASGTVVRD--GAYGYQNLFDTTVDA 213
>pdb|3UR7|A Chain A, Higher-density Crystal Structure Of Potato
Endo-1,3-beta-glucanase
pdb|3UR7|B Chain B, Higher-density Crystal Structure Of Potato
Endo-1,3-beta-glucanase
pdb|3UR8|A Chain A, Lower-density Crystal Structure Of Potato
Endo-1,3-beta-glucanase
pdb|3UR8|B Chain B, Lower-density Crystal Structure Of Potato
Endo-1,3-beta-glucanase
Length = 323
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 121/226 (53%), Gaps = 12/226 (5%)
Query: 27 VGVCYGQLGNNLPSPQESVELMIKSLKATRVKIYDANPKILKALKNIDIQVSIMVPNEII 86
+GVCYG++ NNLPS Q+ ++L + +++IY + + ALK +I++ + VPN+ +
Sbjct: 3 IGVCYGKIANNLPSDQDVIKLY-NANNIKKMRIYYPHTNVFNALKGSNIEIILDVPNQDL 61
Query: 87 NNISLSSQTLSDQWVRTNVLPYLPGTKIRYLLVGNEILSLPDKSIWPNLV-PAMRKIRKS 145
+L++ + ++ WV+ N+ + P K +Y+ VGNE+ + + V PAM I +
Sbjct: 62 E--ALANPSNANGWVQDNIRNHFPDVKFKYIAVGNEVDPGRESGKYARFVGPAMENIYNA 119
Query: 146 LKTLGAR-KIKVGTPSAMDVLQSSFPPSNGTFRSDISESVMRPMLHFLNRTKSFFFVDAY 204
L + G + +IKV T + +L +++PP + FR + +S + P++ FL R + Y
Sbjct: 120 LSSAGLQNQIKVSTSTYSGLLTNTYPPRDSIFREEY-KSFINPIIGFLARHNLPLLANIY 178
Query: 205 TFFPWSSDPKNIHLDYALLESTNITYTDPVTKLTYTNLFDQMLDAV 250
+F + + L YAL T Y NLFD ++D++
Sbjct: 179 PYFGHIDNTNAVPLSYALFNQQRRNDT------GYQNLFDALVDSM 218
>pdb|4GZI|A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In
Complex With Laminaratriose
pdb|4GZJ|A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In
Complex With Laminaratriose And Laminaratetrose
Length = 323
Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 121/226 (53%), Gaps = 12/226 (5%)
Query: 27 VGVCYGQLGNNLPSPQESVELMIKSLKATRVKIYDANPKILKALKNIDIQVSIMVPNEII 86
+GVCYG++ NNLPS Q+ ++L + +++IY + + ALK +I++ + VPN+ +
Sbjct: 3 IGVCYGKIANNLPSDQDVIKLY-NANNIKKMRIYYPHTNVFNALKGSNIEIILDVPNQDL 61
Query: 87 NNISLSSQTLSDQWVRTNVLPYLPGTKIRYLLVGNEILSLPDKSIWPNLV-PAMRKIRKS 145
+L++ + ++ WV+ N+ + P K +Y+ VGNE+ + + V PAM I +
Sbjct: 62 E--ALANPSNANGWVQDNIRNHFPDVKFKYIAVGNEVDPGRESGKYARFVGPAMENIYNA 119
Query: 146 LKTLGAR-KIKVGTPSAMDVLQSSFPPSNGTFRSDISESVMRPMLHFLNRTKSFFFVDAY 204
L + G + +IKV T + +L +++PP + FR + +S + P++ FL R + Y
Sbjct: 120 LSSAGLQNQIKVSTSTYSGLLTNTYPPRDSIFREEY-KSFINPIIGFLARHNLPLLANIY 178
Query: 205 TFFPWSSDPKNIHLDYALLESTNITYTDPVTKLTYTNLFDQMLDAV 250
+F + + L YAL T Y NLFD ++D++
Sbjct: 179 PYFGHIDNTNAVPLSYALFNQQRRNDT------GYQNLFDALVDSM 218
>pdb|2BTV|A Chain A, Atomic Model For Bluetongue Virus (Btv) Core
pdb|2BTV|B Chain B, Atomic Model For Bluetongue Virus (Btv) Core
Length = 901
Score = 30.8 bits (68), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 22/134 (16%)
Query: 52 LKATRVKIYDANPKILKALKNIDIQVSIMVPNEIINNISLSSQTLSDQWVRTNVLPYLPG 111
L+ RVK +DA P P++I+ + S T + + Y
Sbjct: 778 LRTVRVKFFDARP-----------------PDDILQGLPFSYDTNEKGGLSYATIKYATE 820
Query: 112 TKIRYLLVGNEILSLPDKSIWPNLVPAMRKIRKSLKTLGARKIKVGTPSAMDVLQSSFPP 171
T I YL+ E + PD + N M K+ + + + +++VG + VL F
Sbjct: 821 TTIFYLIYNVEFSNTPDSLVLINPTYTMTKVFINKRIV--ERVRVG--QILAVLNRRFVA 876
Query: 172 SNGTFR-SDISESV 184
G R DI++S+
Sbjct: 877 YKGKMRIMDITQSL 890
>pdb|2HA4|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Acetylcholine
pdb|2HA4|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Acetylcholine
pdb|2HA5|A Chain A, Crystal Structure Of Mutant S203a Of Acetylcholinesterase
Complexed With Acetylthiocholine
pdb|2HA5|B Chain B, Crystal Structure Of Mutant S203a Of Acetylcholinesterase
Complexed With Acetylthiocholine
pdb|2HA6|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Succinylcholine
pdb|2HA6|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Succinylcholine
pdb|2HA7|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Butyrylthiocholine
pdb|2HA7|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Butyrylthiocholine
Length = 543
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
Query: 83 NEIINNISLSSQTLSDQWVRTNVLPY--------LPGTKIRYLLVGNEILSLPDKSI 131
E N+ L Q L+ QWV+ N+ + L G VG ILSLP +S+
Sbjct: 165 REAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGEAAGAASVGMHILSLPSRSL 221
>pdb|2XUF|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Mth)
pdb|2XUF|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Mth)
pdb|2XUG|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Wk)
pdb|2XUG|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Wk)
Length = 544
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 84 EIINNISLSSQTLSDQWVRTNVLPY--------LPGTKIRYLLVGNEILSLPDKSI 131
E N+ L Q L+ QWV+ N+ + L G VG ILSLP +S+
Sbjct: 166 EAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSL 221
>pdb|2XUD|A Chain A, Crystal Structure Of The Y337a Mutant Of Mouse
Acetylcholinesterase
pdb|2XUD|B Chain B, Crystal Structure Of The Y337a Mutant Of Mouse
Acetylcholinesterase
pdb|2XUH|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (10
Mth)
pdb|2XUH|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (10
Mth)
pdb|2XUI|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1 Wk)
pdb|2XUI|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1 Wk)
pdb|2XUJ|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1
Mth)
pdb|2XUJ|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1
Mth)
pdb|2XUK|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (10
Mth)
pdb|2XUK|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (10
Mth)
pdb|2XUO|A Chain A, Crystal Structure Of Mache-Y337a Mutant In Complex With
Soaked Tz2pa6 Anti Inhibitor
pdb|2XUO|B Chain B, Crystal Structure Of Mache-Y337a Mutant In Complex With
Soaked Tz2pa6 Anti Inhibitor
pdb|2XUP|A Chain A, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Syn Inhibitor
pdb|2XUP|B Chain B, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Syn Inhibitor
pdb|2XUQ|A Chain A, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Anti-Syn Inhibitors
pdb|2XUQ|B Chain B, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Anti-Syn Inhibitors
Length = 543
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 84 EIINNISLSSQTLSDQWVRTNVLPY--------LPGTKIRYLLVGNEILSLPDKSI 131
E N+ L Q L+ QWV+ N+ + L G VG ILSLP +S+
Sbjct: 166 EAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSL 221
>pdb|1MAH|A Chain A, Fasciculin2-Mouse Acetylcholinesterase Complex
pdb|1J06|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In The Apo
Form
pdb|1J06|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In The Apo
Form
pdb|1J07|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Decidium Complex
pdb|1J07|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Decidium Complex
pdb|1N5R|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Propidium Complex
pdb|1N5R|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Propidium Complex
pdb|2H9Y|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With M-(N,N, N-Trimethylammonio)trifluoroacetophenone
pdb|2H9Y|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With M-(N,N, N-Trimethylammonio)trifluoroacetophenone
pdb|2HA0|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With 4- Ketoamyltrimethylammonium
pdb|2HA0|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With 4- Ketoamyltrimethylammonium
pdb|2HA2|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Succinylcholine
pdb|2HA2|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Succinylcholine
pdb|2HA3|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Choline
pdb|2HA3|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Choline
pdb|2GYU|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Hi-6
pdb|2GYU|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Hi-6
pdb|2GYV|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Ortho-7
pdb|2GYV|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Ortho-7
pdb|2GYW|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Obidoxime
pdb|2GYW|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Obidoxime
pdb|2WLS|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Amts13
pdb|2WLS|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Amts13
pdb|4BC0|A Chain A, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|B Chain B, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|C Chain C, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|D Chain D, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC1|A Chain A, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|B Chain B, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|C Chain C, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|D Chain D, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
Length = 543
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
Query: 83 NEIINNISLSSQTLSDQWVRTNVLPY--------LPGTKIRYLLVGNEILSLPDKSI 131
E N+ L Q L+ QWV+ N+ + L G VG ILSLP +S+
Sbjct: 165 REAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSL 221
>pdb|4A16|A Chain A, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|B Chain B, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|C Chain C, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|D Chain D, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
Length = 545
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 84 EIINNISLSSQTLSDQWVRTNVLPY--------LPGTKIRYLLVGNEILSLPDKSI 131
E N+ L Q L+ QWV+ N+ + L G VG ILSLP +S+
Sbjct: 163 EAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSL 218
>pdb|1KU6|A Chain A, Fasciculin 2-Mouse Acetylcholinesterase Complex
Length = 549
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 84 EIINNISLSSQTLSDQWVRTNVLPY--------LPGTKIRYLLVGNEILSLPDKSI 131
E N+ L Q L+ QWV+ N+ + L G VG ILSLP +S+
Sbjct: 166 EAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSL 221
>pdb|1N5M|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Gallamine Complex
pdb|1N5M|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Gallamine Complex
Length = 541
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
Query: 83 NEIINNISLSSQTLSDQWVRTNVLPY--------LPGTKIRYLLVGNEILSLPDKSI 131
E N+ L Q L+ QWV+ N+ + L G VG ILSLP +S+
Sbjct: 165 REAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSL 221
>pdb|1Q83|A Chain A, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Syn Complex
pdb|1Q83|B Chain B, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Syn Complex
pdb|1Q84|A Chain A, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Anti Complex
pdb|1Q84|B Chain B, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Anti Complex
Length = 580
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
Query: 83 NEIINNISLSSQTLSDQWVRTNVLPY--------LPGTKIRYLLVGNEILSLPDKSI 131
E N+ L Q L+ QWV+ N+ + L G VG ILSLP +S+
Sbjct: 196 REAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSL 252
>pdb|2C0P|A Chain A, Aged Form Of Mouse Acetylcholinesterase Inhibited By Tabun
pdb|2C0P|B Chain B, Aged Form Of Mouse Acetylcholinesterase Inhibited By Tabun
pdb|2C0Q|A Chain A, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun
pdb|2C0Q|B Chain B, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun
pdb|2JEY|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Hlo-7
pdb|2JEY|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Hlo-7
pdb|2WHR|A Chain A, Crystal Structure Of Acetylcholinesterase In Complex With
K027
pdb|2WHR|B Chain B, Crystal Structure Of Acetylcholinesterase In Complex With
K027
pdb|4A23|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Racemic
C5685
pdb|4A23|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Racemic
C5685
pdb|4ARA|A Chain A, Mus Musculus Acetylcholinesterase In Complex With
(r)-c5685 At 2.5 A Resolution.
pdb|4ARA|B Chain B, Mus Musculus Acetylcholinesterase In Complex With
(r)-c5685 At 2.5 A Resolution.
pdb|4ARB|A Chain A, Mus Musculus Acetylcholinesterase In Complex With
(s)-c5685 At 2.25 A Resolution.
pdb|4ARB|B Chain B, Mus Musculus Acetylcholinesterase In Complex With
(s)-c5685 At 2.25 A Resolution
Length = 548
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
Query: 83 NEIINNISLSSQTLSDQWVRTNVLPY--------LPGTKIRYLLVGNEILSLPDKSI 131
E N+ L Q L+ QWV+ N+ + L G VG ILSLP +S+
Sbjct: 165 REAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSL 221
>pdb|1C2B|A Chain A, Electrophorus Electricus Acetylcholinesterase
Length = 540
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 84 EIINNISLSSQTLSDQWVRTNVLPY--------LPGTKIRYLLVGNEILSLPDKSI 131
E N+ L Q L+ QWV+ N+ + L G VG ILSLP +S+
Sbjct: 163 EAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSL 218
>pdb|1C2O|A Chain A, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|B Chain B, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|C Chain C, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|D Chain D, Electrophorus Electricus Acetylcholinesterase
Length = 539
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 84 EIINNISLSSQTLSDQWVRTNVLPY--------LPGTKIRYLLVGNEILSLPDKSI 131
E N+ L Q L+ QWV+ N+ + L G VG ILSLP +S+
Sbjct: 162 EAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSL 217
>pdb|1MAA|A Chain A, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|B Chain B, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|C Chain C, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|D Chain D, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
Length = 547
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
Query: 83 NEIINNISLSSQTLSDQWVRTNVLPY--------LPGTKIRYLLVGNEILSLPDKSI 131
E N+ L Q L+ QWV+ N+ + L G VG ILSLP +S+
Sbjct: 165 REAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSL 221
>pdb|2WHP|B Chain B, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin And In Complex With Hi-6
Length = 548
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 84 EIINNISLSSQTLSDQWVRTNVLPY--------LPGTKIRYLLVGNEILSLPDKSI 131
E N+ L Q L+ QWV+ N+ + L G VG ILSLP +S+
Sbjct: 166 EAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGEXAGAASVGMHILSLPSRSL 221
>pdb|2JGF|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Fenamiphos
pdb|2JGF|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Fenamiphos
pdb|2JGI|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGI|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGK|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Fenamiphos
pdb|2JGK|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Fenamiphos
pdb|2JGL|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Vx And Sarin
pdb|2JGL|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Vx And Sarin
pdb|2JGM|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGM|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JEZ|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Hlo-7
pdb|2JEZ|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Hlo-7
pdb|2JF0|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Ortho-7
pdb|2JF0|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Ortho-7
pdb|3DL4|A Chain A, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
pdb|3DL4|B Chain B, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
pdb|2WHP|A Chain A, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin And In Complex With Hi-6
pdb|2WHQ|A Chain A, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin (Aged) In Complex With Hi-6
pdb|2WHQ|B Chain B, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin (Aged) In Complex With Hi-6
pdb|2WU3|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Hi-6
pdb|2WU3|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Hi-6
pdb|2WU4|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Ortho-7
pdb|2WU4|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Ortho-7
pdb|2Y2U|A Chain A, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Vx-Update
pdb|2Y2U|B Chain B, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Vx-Update
pdb|2Y2V|A Chain A, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Sarin-Update
pdb|2Y2V|B Chain B, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Sarin-Update
Length = 548
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
Query: 83 NEIINNISLSSQTLSDQWVRTNVLPY--------LPGTKIRYLLVGNEILSLPDKSI 131
E N+ L Q L+ QWV+ N+ + L G VG ILSLP +S+
Sbjct: 165 REAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGEXAGAASVGMHILSLPSRSL 221
>pdb|1LK0|A Chain A, Disulfide Intermediate Of C89l Arsenate Reductase From
Pi258
pdb|1LK0|B Chain B, Disulfide Intermediate Of C89l Arsenate Reductase From
Pi258
Length = 131
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Query: 57 VKIYDANPKILKALKNIDIQV----SIMVPNEIINNISLSSQTLSDQWVRTNVLPYLP 110
++ + NPK ++A+K +DI + S ++ N+I+ L SD N LP LP
Sbjct: 39 IETHGVNPKAIEAMKEVDIDISNHTSDLIDNDILKQSDLVVTLCSDA---DNNLPILP 93
>pdb|2CD7|A Chain A, Staphylococcus Aureus Pi258 Arsenate Reductase (Arsc) H62q
Mutant
Length = 131
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 57 VKIYDANPKILKALKNIDI----QVSIMVPNEIINNISLSSQTLSDQWVRTNVLPYLP 110
++ + NPK ++A+K +DI Q S ++ N+I+ L SD N P LP
Sbjct: 39 IETHGVNPKAIEAMKEVDIDISNQTSDLIDNDILKQSDLVVTLCSDA---DNNCPILP 93
>pdb|1CJY|A Chain A, Human Cytosolic Phospholipase A2
pdb|1CJY|B Chain B, Human Cytosolic Phospholipase A2
Length = 749
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 71/172 (41%), Gaps = 22/172 (12%)
Query: 29 VCYGQLGNNLPSPQESVELMIK----SLKATRVKIYDANPK-------ILKALKNIDIQV 77
V G G+ L +P VEL I S K TR D NP IL + +++
Sbjct: 30 VTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEI 89
Query: 78 SIMVPNEIINN-ISLSSQTLSDQWV-RTNVLPYLPGTKIRYLL-VGNEILSLPDKSIWPN 134
++M N +++ + ++ T+S V +P++ +L + E+ S PD
Sbjct: 90 TLMDANYVMDETLGTATFTVSSMKVGEKKEVPFIFNQVTEMVLEMSLEVCSCPDLRFSMA 149
Query: 135 LVPAMR--------KIRKSLKTLGARKIKVGTPSAMDVLQSSFPPSNGTFRS 178
L + IR+S+K L K G SA DV + S G FR+
Sbjct: 150 LCDQEKTFRQQRKEHIRESMKKLLGPKNSEGLHSARDVPVVAILGSGGGFRA 201
>pdb|1LJL|A Chain A, Wild Type Pi258 S. Aureus Arsenate Reductase
Length = 131
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 57 VKIYDANPKILKALKNIDIQV----SIMVPNEIINNISLSSQTLSDQWVRTNVLPYLP 110
++ + NPK ++A+K +DI + S ++ N+I+ L SD N P LP
Sbjct: 39 IETHGVNPKAIEAMKEVDIDISNHTSDLIDNDILKQSDLVVTLCSDA---DNNCPILP 93
>pdb|3NH4|A Chain A, Crystal Structure Of Murine Aminoacylase 3
Length = 327
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 93 SQTLSDQWVRTNVLPYLPGTKIRYLLVGNEILSLPDKSIWPNLVPAMRKIRKSLKTLGAR 152
+ T+ Q + P PG I L G ++L D ++P + K + L +
Sbjct: 248 AGTVHPQLQDHDFEPLRPGEPIFKLFSGEDVLYEGDSIVYPVFINEAAYYEKHVAFLKSE 307
Query: 153 KIKVGTPSAM 162
KI+V P+ +
Sbjct: 308 KIRVTVPALL 317
>pdb|1JF8|A Chain A, X-ray Structure Of Reduced C10s, C15a Arsenate Reductase
From Pi258
pdb|2FXI|A Chain A, Arsenate Reductase (Arsc From Pi258) C10sC15A DOUBLE
Mutant With Sulfate In Its Active Site
Length = 131
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 57 VKIYDANPKILKALKNIDIQV----SIMVPNEIINNISLSSQTLSDQWVRTNVLPYLP 110
++ + NPK ++A+K +DI + S ++ N+I+ L SD N P LP
Sbjct: 39 IETHGVNPKAIEAMKEVDIDISNHTSDLIDNDILKQSDLVVTLCSDA---DNNCPILP 93
>pdb|3NFZ|A Chain A, Crystal Structure Of Murine Aminoacylase 3 In Complex With
N-Acetyl-L- Tyrosine
pdb|3NH5|A Chain A, Crystal Structure Of E177a-Mutant Murine Aminoacylase 3
pdb|3NH8|A Chain A, Crystal Structure Of Murine Aminoacylase 3 In Complex With
N-Acetyl-S- 1,2-Dichlorovinyl-L-Cysteine
Length = 327
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 93 SQTLSDQWVRTNVLPYLPGTKIRYLLVGNEILSLPDKSIWPNLVPAMRKIRKSLKTLGAR 152
+ T+ Q + P PG I L G ++L D ++P + K + L +
Sbjct: 248 AGTVHPQLQDHDFEPLRPGEPIFKLFSGEDVLYEGDSIVYPVFINEAAYYEKHVAFLKSE 307
Query: 153 KIKVGTPSAM 162
KI+V P+ +
Sbjct: 308 KIRVTVPALL 317
>pdb|1LJU|A Chain A, X-Ray Structure Of C15a Arsenate Reductase From Pi258
Complexed With Arsenite
Length = 131
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 57 VKIYDANPKILKALKNIDIQV----SIMVPNEIINNISLSSQTLSDQWVRTNVLPYLP 110
++ + NPK ++A+K +DI + S ++ N+I+ L SD N P LP
Sbjct: 39 IETHGVNPKAIEAMKEVDIDISNHTSDLIDNDILKQSDLVVTLCSDA---DNNCPILP 93
>pdb|1RXE|A Chain A, Arsc Complexed With Mnb
pdb|1RXI|A Chain A, Pi258 Arsenate Reductase (Arsc) Triple Mutant C10sC15AC82S
Length = 131
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 57 VKIYDANPKILKALKNIDIQVSIMVPNEIINNISLSSQ---TLSDQWVRTNVLPYLP 110
++ + NPK ++A+K +DI +S + I N+I S TLS N P LP
Sbjct: 39 IETHGVNPKAIEAMKEVDIDISNHTSDLIDNDILKQSDLVVTLSSD--ADNNCPILP 93
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,433,492
Number of Sequences: 62578
Number of extensions: 237708
Number of successful extensions: 675
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 638
Number of HSP's gapped (non-prelim): 37
length of query: 250
length of database: 14,973,337
effective HSP length: 96
effective length of query: 154
effective length of database: 8,965,849
effective search space: 1380740746
effective search space used: 1380740746
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)